HHsearch results for GI: 254781174 and protein with PDBid: 1hz4_A
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transcription activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=99.14 E-value=6.1e-08 Score=63.10 Aligned_cols=187 Identities=9% Similarity=-0.024 Sum_probs=131.4
Q ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH---HH
Q ss_conf 8999999999998098999999999998530477302--689987788776545556799999887540112110---13
Q gi|254781174|r 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA--RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN---VD 131 (271)
Q Consensus 57 ~~~lY~~a~~~~~~~~y~~A~~~f~~i~~~~P~s~~a--~~A~~~la~~~y~~~~y~~A~~~~~~fi~~~P~s~~---~~ 131 (271)
++...-+|..++..|++++|+..|++++...|.+... ..+...+|.+++..|++++|+..+++.++..|..+. ..
T Consensus 14 ae~~~l~A~~~~~~g~~~~A~~~~~~aL~~~~~~~~~~~~~a~~~lg~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~ 93 (373)
T 1hz4_A 14 AEFNALRAQVAINDGNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYAL 93 (373)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHH
T ss_conf 99999999999988799999999999985488999299999999999999987999999999999999747536879999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 55544344455554431112345899999999999852001013456555555566666665556666654432234568
Q gi|254781174|r 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211 (271)
Q Consensus 132 ~A~y~~a~~~~~~~~~~~~d~~~~~~A~~~f~~~i~~yP~S~ya~~A~~~l~~~~~~La~~e~~ia~~Y~~~~~y~aA~~ 211 (271)
.+...+|.++.. .+...+|...+++.+...|........ ..+.-....|..|+..|++..|..
T Consensus 94 ~~~~~l~~~~~~--------~g~~~~a~~~~~~~~~~~~~~~~~~~~---------~~a~~~~~la~~~~~~g~~~~a~~ 156 (373)
T 1hz4_A 94 WSLIQQSEILFA--------QGFLQTAWETQEKAFQLINEQHLEQLP---------MHEFLVRIRAQLLWAWARLDEAEA 156 (373)
T ss_dssp HHHHHHHHHHHH--------TTCHHHHHHHHHHHHHHHHHTTCTTST---------HHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHH--------CCCHHHHHHHHHHHHHHHHHHCCCCCH---------HHHHHHHHHHHHHHHCCCHHHHHH
T ss_conf 999999999998--------154899999999999997860466676---------999999999999998799899999
Q ss_pred HHHHHHHHCCCCH--HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
Q ss_conf 9998865289981--159999999999997498799999999997856999
Q gi|254781174|r 212 RFQLVLANYSDAE--HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 (271)
Q Consensus 212 ~~~~~i~~yp~t~--~~~eAl~~l~~~y~~lg~~d~A~~~~~~l~~~yP~s 260 (271)
.++..+...|... ....++..++..+...|..++|...........+..
T Consensus 157 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~ 207 (373)
T 1hz4_A 157 SARSGIEVLSSYQPQQQLQCLAMLIQCSLARGDLDNARSQLNRLENLLGNG 207 (373)
T ss_dssp HHHHHHHHTTTSCGGGGHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC
T ss_conf 999977765400017899999987899997244799999999999998757