HHsearch results for GI: 254781174 and protein with PDBid: 1ihg_A
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=98.72 E-value=5.9e-07 Score=57.36 Aligned_cols=121 Identities=15% Similarity=0.092 Sum_probs=81.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
Q ss_conf 99877887765455567999998875401121101355544344455554431112345899999999999852001013
Q gi|254781174|r 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175 (271)
Q Consensus 96 A~~~la~~~y~~~~y~~A~~~~~~fi~~~P~s~~~~~A~y~~a~~~~~~~~~~~~d~~~~~~A~~~f~~~i~~yP~S~ya 175 (271)
..-.+|..+|+.++|++|+..|++.++..+.+..... + ......
T Consensus 225 ~lK~~Gn~~fk~g~y~~Ai~~Y~kAL~~l~~~~~~~~------------------~-----------~~~~~~------- 268 (370)
T 1ihg_A 225 DLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAE------------------D-----------ADGAKL------- 268 (370)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSC------------------H-----------HHHGGG-------
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHCCHHHC------------------C-----------HHHHHH-------
T ss_conf 9999999999859999999999999951300210000------------------0-----------555541-------
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Q ss_conf 45655555556666666555666665443223456899988652899811599999999999974987999999999978
Q gi|254781174|r 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255 (271)
Q Consensus 176 ~~A~~~l~~~~~~La~~e~~ia~~Y~~~~~y~aA~~~~~~~i~~yp~t~~~~eAl~~l~~~y~~lg~~d~A~~~~~~l~~ 255 (271)
......-...+|..|++.++|..|+..++.+++.-|+. .+|++++|.+|..+|+.++|.+.++....
T Consensus 269 ----------~~~~~~~~~Nla~~~~kl~~y~~Ai~~~~kaL~ldp~~---~ka~~~~g~a~~~lg~~e~A~~~~~kal~ 335 (370)
T 1ihg_A 269 ----------QPVALSCVLNIGACKLKMSDWQGAVDSCLEALEIDPSN---TKALYRRAQGWQGLKEYDQALADLKKAQE 335 (370)
T ss_dssp ----------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred ----------CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC---HHHHHHHHHHHHHCCCHHHHHHHHHHHHH
T ss_conf ----------91169999999999998488899999999999849998---99999999999986999999999999998
Q ss_pred HCCCCHHHHH
Q ss_conf 5699978999
Q gi|254781174|r 256 RYPQGYWARY 265 (271)
Q Consensus 256 ~yP~s~~~~~ 265 (271)
-.|++.....
T Consensus 336 l~P~n~~~~~ 345 (370)
T 1ihg_A 336 IAPEDKAIQA 345 (370)
T ss_dssp HCTTCHHHHH
T ss_pred HCCCCHHHHH
T ss_conf 4999899999