HHsearch results for GI: 254781174 and protein with PDBid: 1w3b_A
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.69 E-value=5e-15 Score=104.45 Aligned_cols=188 Identities=13% Similarity=0.046 Sum_probs=135.4
Q ss_pred CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
Q ss_conf 68999999999998098999999999998530477302689987788776545556799999887540112110135554
Q gi|254781174|r 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135 (271)
Q Consensus 56 ~~~~lY~~a~~~~~~~~y~~A~~~f~~i~~~~P~s~~a~~A~~~la~~~y~~~~y~~A~~~~~~fi~~~P~s~~~~~A~y 135 (271)
.+...+..|..+...|++.+|...|++++...|.. .++.+.+|.++...+++++|+..+++.+...|.+.. +.+
T Consensus 168 ~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~---~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~---~~~ 241 (388)
T 1w3b_A 168 FAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNF---LDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAV---VHG 241 (388)
T ss_dssp CHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTC---HHHHHHHHHHHHTTTCTTHHHHHHHHHHHHCTTCHH---HHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC---HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHH---HHH
T ss_conf 07999998899883486999999999998839760---999999999988568799999999999884975279---999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH--------------------HHHHHHHHH
Q ss_conf 434445555443111234589999999999985200101345655555556--------------------666666555
Q gi|254781174|r 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR--------------------NQLAAKEVE 195 (271)
Q Consensus 136 ~~a~~~~~~~~~~~~d~~~~~~A~~~f~~~i~~yP~S~ya~~A~~~l~~~~--------------------~~La~~e~~ 195 (271)
.+|.++.. ++...+|+..+++.+...|+++.+- ..+..+. ..-+.....
T Consensus 242 ~l~~~~~~--------~~~~~~A~~~~~~al~~~p~~~~~~---~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~ 310 (388)
T 1w3b_A 242 NLACVYYE--------QGLIDLAIDTYRRAIELQPHFPDAY---CNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNN 310 (388)
T ss_dssp HHHHHHHH--------TTCHHHHHHHHHHHHHTCSSCHHHH---HHHHHHHHHHSCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHH--------CCCHHHHHHHHHHHHHHCCCCHHHH---HHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHH
T ss_conf 99999998--------7999999999999997299989999---999999998477999999888776328603688778
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHH
Q ss_conf 66666544322345689998865289981159999999999997498799999999997856999789
Q gi|254781174|r 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263 (271)
Q Consensus 196 ia~~Y~~~~~y~aA~~~~~~~i~~yp~t~~~~eAl~~l~~~y~~lg~~d~A~~~~~~l~~~yP~s~~~ 263 (271)
.|..|.+.|++..|+..|+.+++..|+. +++++.+|.+|..+|+.++|...++......|+....
T Consensus 311 ~~~~~~~~~~~~~A~~~~~~al~~~p~~---~~~~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~a 375 (388)
T 1w3b_A 311 LANIKREQGNIEEAVRLYRKALEVFPEF---AAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADA 375 (388)
T ss_dssp HHHHHHTTTCHHHHHHHHHHHTTSCTTC---HHHHHHHHHHHHTTTCCHHHHHHHHHHHTTCTTCHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHCCCC---HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHH
T ss_conf 9999998789999999999999869898---9999999999998499999999999999739998999