HHsearch results for GI: 254781174 and protein with PDBid: 1zbp_A
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein structure initiative; 2.40A {Vibrio parahaemolyticus rimd 2210633} SCOP: e.61.1.1
Probab=97.61 E-value=0.00091 Score=38.77 Aligned_cols=130 Identities=12% Similarity=-0.065 Sum_probs=86.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
Q ss_conf 88776545556799999887540112110135554434445555443111234589999999999985200101345655
Q gi|254781174|r 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180 (271)
Q Consensus 101 a~~~y~~~~y~~A~~~~~~fi~~~P~s~~~~~A~y~~a~~~~~~~~~~~~d~~~~~~A~~~f~~~i~~yP~S~ya~~A~~ 180 (271)
+......|++++|+..+++.++..|+++. +....|..+.. .+...+|++.++..++..|++..+.....
T Consensus 4 ~~~aL~~G~l~eAl~~l~~alr~~P~da~---ar~~L~~lL~~--------~G~~~~A~~qL~~a~~l~P~~~~~~~~~~ 72 (273)
T 1zbp_A 4 WKNALSEGQLQQALELLIEAIKASPKDAS---LRSSFIELLCI--------DGDFERADEQLMQSIKLFPEYLPGASQLR 72 (273)
T ss_dssp HHHHTTTTCHHHHHHHHHHHHHTCTTCHH---HHHHHHHHHHH--------HTCHHHHHHHHHHHHHHCGGGHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHHHHHHCCCCHH---HHHHHHHHHHH--------CCCHHHHHHHHHHHHHHCCCCHHHHHHHH
T ss_conf 99999879999999999999997899999---99999999998--------79999999999999987988689999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
Q ss_conf 55555666666655566666544322345689998865289981159999999999997498799999999997856999
Q gi|254781174|r 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260 (271)
Q Consensus 181 ~l~~~~~~La~~e~~ia~~Y~~~~~y~aA~~~~~~~i~~yp~t~~~~eAl~~l~~~y~~lg~~d~A~~~~~~l~~~yP~s 260 (271)
.+ ++....+ ...+... .....+..+....++...+.++...|+.++|...+..+..--|++
T Consensus 73 ~l--l~a~~~r--------------~e~~a~~---~~~~~~~~p~~~~a~l~~a~~~~~~Gd~e~A~~~~~~A~~l~P~~ 133 (273)
T 1zbp_A 73 HL--VKAAQAR--------------KDFAQGA---ATAKVLGENEELTKSLVSFNLSMVSQDYEQVSELALQIEELRQEK 133 (273)
T ss_dssp HH--HHHHHHH--------------HHHTTSC---CCEECCCSCHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCC
T ss_pred HH--HHHCCCC--------------HHHHHHH---HHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCC
T ss_conf 99--9834575--------------8999999---986331397689999999999997789899999999997369999