HHsearch results for GI: 254781174 and protein with PDBid: 2ff4_A
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, transcription; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis H37RV} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=93.19 E-value=0.31 Score=24.05 Aligned_cols=102 Identities=11% Similarity=0.034 Sum_probs=66.4
Q ss_pred HHHHHHHHHHHHHHHHHHCCHHHHH-HHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
Q ss_conf 4589999999999985200101345-655555556666----66655566666544322345689998865289981159
Q gi|254781174|r 153 RATKLMLQYMSRIVERYTNSPYVKG-ARFYVTVGRNQL----AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227 (271)
Q Consensus 153 ~~~~~A~~~f~~~i~~yP~S~ya~~-A~~~l~~~~~~L----a~~e~~ia~~Y~~~~~y~aA~~~~~~~i~~yp~t~~~~ 227 (271)
+....|+..++..+..|-+...... ....+...+..+ ..--...+..+...|++..|+..++.++...|- .+
T Consensus 129 ~~~~~a~~~l~~Al~LyrG~~L~~~~~~~w~~~~r~~l~~~~~~al~~la~~~l~~g~~~~a~~~~~~~l~~dP~---~E 205 (388)
T 2ff4_A 129 GRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIAELEALTFEHPY---RE 205 (388)
T ss_dssp TCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT---CH
T ss_pred CCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC---CH
T ss_conf 997999999999999727876788754027899999999999999999999999869889999999999996848---99
Q ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
Q ss_conf 999999999997498799999999997856
Q gi|254781174|r 228 EAMARLVEAYVALALMDEAREVVSLIQERY 257 (271)
Q Consensus 228 eAl~~l~~~y~~lg~~d~A~~~~~~l~~~y 257 (271)
.+...+..+|...|...+|...+..+....
T Consensus 206 ~~~~~Lm~al~~~G~~~~Al~~Y~~~~~~L 235 (388)
T 2ff4_A 206 PLWTQLITAYYLSDRQSDALGAYRRVKTTL 235 (388)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
T ss_conf 999999999998699999999999999999