HHsearch results for GI: 254781174 and protein with PDBid: 2h6f_A
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.11 E-value=5.6e-09 Score=69.17 Aligned_cols=96 Identities=8% Similarity=0.104 Sum_probs=50.2
Q ss_pred HHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
Q ss_conf 9999998098999999999998530477302689987788776545-556799999887540112110135554434445
Q gi|254781174|r 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG-KYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141 (271)
Q Consensus 63 ~a~~~~~~~~y~~A~~~f~~i~~~~P~s~~a~~A~~~la~~~y~~~-~y~~A~~~~~~fi~~~P~s~~~~~A~y~~a~~~ 141 (271)
.|..+.+.+.+++|+..+++++...|.. ..+....+.++..++ ++++|+..+++.+..+|++.. +++.+|.++
T Consensus 103 ~~a~~~~~e~~~~Al~~~~~ai~lnP~~---~~aw~~r~~~l~~l~~~~~~al~~~~~~l~~~pk~~~---~~~~~g~~~ 176 (382)
T 2h6f_A 103 FRAVLQRDERSERAFKLTRDAIELNAAN---YTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQ---VWHHRRVLV 176 (382)
T ss_dssp HHHHHHHTCCCHHHHHHHHHHHHHCTTC---HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHH---HHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHCCCH---HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHH---HHHHHHHHH
T ss_conf 9999996765199999999999979735---9999999999998074899999999999987899889---999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 5554431112345899999999999852001
Q gi|254781174|r 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172 (271)
Q Consensus 142 ~~~~~~~~~d~~~~~~A~~~f~~~i~~yP~S 172 (271)
... +...+|+..+++.+...|+.
T Consensus 177 ~~l--------~~~~~Al~~~~~al~~~p~n 199 (382)
T 2h6f_A 177 EWL--------RDPSQELEFIADILNQDAKN 199 (382)
T ss_dssp HHH--------TCCTTHHHHHHHHHHHCTTC
T ss_pred HHC--------CCHHHHHHHHHHHHHHCCCC
T ss_conf 982--------57999999999998638656