HHsearch results for GI: 254781174 and protein with PDBid: 2ifu_A
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=98.93 E-value=1.4e-07 Score=61.06 Aligned_cols=193 Identities=15% Similarity=0.099 Sum_probs=133.7
Q ss_pred CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC---CHH
Q ss_conf 689999999999980989999999999985304773--026899877887765455567999998875401121---101
Q gi|254781174|r 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG--VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES---KNV 130 (271)
Q Consensus 56 ~~~~lY~~a~~~~~~~~y~~A~~~f~~i~~~~P~s~--~a~~A~~~la~~~y~~~~y~~A~~~~~~fi~~~P~s---~~~ 130 (271)
....+.+.|..+.+.+++.+|++.+++....+.... ...-..+..+..++..+++++|+..|++.+..+... +..
T Consensus 75 ~a~~~~~~g~~~~~~~~~~~a~~~~~~a~~~~~~~~~~~~aa~~~~~~~~~~~~~~~~~a~~~y~~A~~i~~~~~~~~~~ 154 (307)
T 2ifu_A 75 AAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLMEPLDLSKAVHLYQQAAAVFENEERLRQA 154 (307)
T ss_dssp HHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHH
T ss_conf 99999999999987265899999899999998861890677788877889987145999999999999999875996479
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 35554434445555443111234589999999999985200101345655555556666666555666665443223456
Q gi|254781174|r 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210 (271)
Q Consensus 131 ~~A~y~~a~~~~~~~~~~~~d~~~~~~A~~~f~~~i~~yP~S~ya~~A~~~l~~~~~~La~~e~~ia~~Y~~~~~y~aA~ 210 (271)
..++..+|.++.. ++...+|++.|++.+..+....-. ..++.-.+.+|..|+..|++..|.
T Consensus 155 ~~~~~~la~~~~~--------~~~y~eA~~~~~~a~~i~~~~~~~-----------~~~~~~~~~l~~~~l~~gd~~~A~ 215 (307)
T 2ifu_A 155 AELIGKASRLLVR--------QQKFDEAAASLQKEKSMYKEMENY-----------PTCYKKCIAQVLVQLHRADYVAAQ 215 (307)
T ss_dssp HHHHHHHHHHHHH--------TTCHHHHHHHHHHHHHHHHHTTCH-----------HHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHH--------HCCHHHHHHHHHHHHHHHHHCCCH-----------HHHHHHHHHHHHHHHHCCCHHHHH
T ss_conf 9999748899887--------168999999999999999986890-----------999999997999999868999999
Q ss_pred HHHHHHHHH--CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHH
Q ss_conf 899988652--89981159999999999997498799999999997856999789999986
Q gi|254781174|r 211 PRFQLVLAN--YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269 (271)
Q Consensus 211 ~~~~~~i~~--yp~t~~~~eAl~~l~~~y~~lg~~d~A~~~~~~l~~~yP~s~~~~~a~~~ 269 (271)
..|+..+.. |.+|.. ..++..|.++| ..|+.+.+.+..+.=..++=|+...+-+..|
T Consensus 216 ~~~~~a~~~~~f~~s~e-~~~~~~Ll~a~-~~~D~e~~~~~~~~~~~~~ld~~~~~l~~~l 274 (307)
T 2ifu_A 216 KCVRESYSIPGFSGSED-CAALEDLLQAY-DEQDEEQLLRVCRSPLVTYMDNDYAKLAISL 274 (307)
T ss_dssp HHHHHHTTSTTSTTSHH-HHHHHHHHHHH-HTTCHHHHHHHTTSHHHHTSCHHHHHHHHTC
T ss_pred HHHHHHHCCCCCCCCHH-HHHHHHHHHHH-HHCCHHHHHHHHHHHHHHHCCHHHHHHHHHC
T ss_conf 99999855666799899-99999999999-8069999999986155541459999999867