HHsearch results for GI: 254781174 and protein with PDBid: 2kat_A
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=98.57 E-value=6.5e-07 Score=57.11 Aligned_cols=84 Identities=6% Similarity=-0.132 Sum_probs=68.4
Q ss_pred HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999985304773026899877887765455567999998875401121101355544344455554431112345
Q gi|254781174|r 75 KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154 (271)
Q Consensus 75 ~A~~~f~~i~~~~P~s~~a~~A~~~la~~~y~~~~y~~A~~~~~~fi~~~P~s~~~~~A~y~~a~~~~~~~~~~~~d~~~ 154 (271)
.|++.|++++...|+++ .+.+.+|.+|+..++|++|+..|++.++..|+++ .+++.+|.++..+ +.
T Consensus 3 ~~~e~le~~l~~~pd~~---~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~---~~~~~lg~~~~~~--------g~ 68 (115)
T 2kat_A 3 AITERLEAMLAQGTDNM---LLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYS---VAWKWLGKTLQGQ--------GD 68 (115)
T ss_dssp CHHHHHHHHHTTTCCCH---HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---HHHHHHHHHHHHH--------TC
T ss_pred HHHHHHHHHHHHCCCCH---HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHC--------CC
T ss_conf 99999999987299989---9999999999985999999999999788743059---9999999999997--------89
Q ss_pred HHHHHHHHHHHHHHHHCC
Q ss_conf 899999999999852001
Q gi|254781174|r 155 TKLMLQYMSRIVERYTNS 172 (271)
Q Consensus 155 ~~~A~~~f~~~i~~yP~S 172 (271)
..+|+..|+..+...|+.
T Consensus 69 ~~~A~~~~~~al~l~~~~ 86 (115)
T 2kat_A 69 RAGARQAWESGLAAAQSR 86 (115)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCC
T ss_conf 999999999999648517