HHsearch results for GI: 254781174 and protein with PDBid: 2vq2_A
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.41 E-value=1.8e-11 Score=83.65 Aligned_cols=59 Identities=19% Similarity=0.148 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
Q ss_conf 66666544322345689998865289981159999999999997498799999999997856
Q gi|254781174|r 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257 (271)
Q Consensus 196 ia~~Y~~~~~y~aA~~~~~~~i~~yp~t~~~~eAl~~l~~~y~~lg~~d~A~~~~~~l~~~y 257 (271)
+|..|...|++..|+..|+.+++.-|+.+ ++++.++.+|..+|..++|...++.+....
T Consensus 119 lg~~~~~~g~~~~A~~~~~~al~~~p~~~---~~~~~la~~~~~~~~~~~A~~~~~~~~~~~ 177 (225)
T 2vq2_A 119 KGICSAKQGQFGLAEAYLKRSLAAQPQFP---PAFKELARTKMLAGQLGDADYYFKKYQSRV 177 (225)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHSTTCH---HHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHCCCCH---HHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
T ss_conf 68888885899999999999998689989---999999999999499999999999998428