HHsearch results for GI: 254781174 and protein with PDBid: 3cv0_A

>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.68  E-value=2.6e-14  Score=100.29  Aligned_cols=196  Identities=8%  Similarity=-0.053  Sum_probs=108.3

Q ss_pred             HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH---
Q ss_conf             89999999999980989999999999985304773026899877887765455567999998875401121101355---
Q gi|254781174|r   57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV---  133 (271)
Q Consensus        57 ~~~lY~~a~~~~~~~~y~~A~~~f~~i~~~~P~s~~a~~A~~~la~~~y~~~~y~~A~~~~~~fi~~~P~s~~~~~A---  133 (271)
                      ++.++..|..+.+.|++++|+..|++.+...|.+.   .+...+|.++...|++++|+..+++.+...|+.+.....   
T Consensus        55 ~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~---~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~  131 (327)
T 3cv0_A           55 EEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDI---AVHAALAVSHTNEHNANAALASLRAWLLSQPQYEQLGSVNLQ  131 (327)
T ss_dssp             HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---HHHHHHHHHHHHTTCHHHHHHHHHHHHHTSTTTTTC------
T ss_pred             HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCH---HHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH
T ss_conf             99999999999987999999999999987398869---999998899987174156999876444027307888765424


Q ss_pred             ---------------------HHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
Q ss_conf             ---------------------544344455554--------------431112345899999999999852001013456
Q gi|254781174|r  134 ---------------------YYLVGMSYAQMI--------------RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA  178 (271)
Q Consensus       134 ---------------------~y~~a~~~~~~~--------------~~~~~d~~~~~~A~~~f~~~i~~yP~S~ya~~A  178 (271)
                                           .|..+...+...              ......++...+|+..|+..++..|+++.+   
T Consensus       132 ~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~---  208 (327)
T 3cv0_A          132 ADVDIDDLNVQSEDFFFAAPNEYRECRTLLHAALEMNPNDAQLHASLGVLYNLSNNYDSAAANLRRAVELRPDDAQL---  208 (327)
T ss_dssp             --------------CCTTSHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH---
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHH---
T ss_conf             56666569999999999987789999999999997498620344401221025544999999999988618787999---


Q ss_pred             HHHHHHH--------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH---------HHHHH
Q ss_conf             5555555--------------------666666655566666544322345689998865289981---------15999
Q gi|254781174|r  179 RFYVTVG--------------------RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE---------HAEEA  229 (271)
Q Consensus       179 ~~~l~~~--------------------~~~La~~e~~ia~~Y~~~~~y~aA~~~~~~~i~~yp~t~---------~~~eA  229 (271)
                      ...+..+                    +..-+.-.+.+|..|.+.|+|..|+..|+.+|...|+..         ....+
T Consensus       209 ~~~lg~~~~~~g~~~eA~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~ai~l~~~~~~~~~~~~~~~~~~~  288 (327)
T 3cv0_A          209 WNKLGATLANGNRPQEALDAYNRALDINPGYVRVMYNMAVSYSNMSQYDLAAKQLVRAIYMQVGGTTPTGEASREATRSM  288 (327)
T ss_dssp             HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCC-----CCTHHHHH
T ss_pred             HHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
T ss_conf             99999999984789999999999998598989999999999998499999999999998689999872236669999999


Q ss_pred             HHHHHHHHHHCCCHHHHHHHHH----HHHHHCC
Q ss_conf             9999999997498799999999----9978569
Q gi|254781174|r  230 MARLVEAYVALALMDEAREVVS----LIQERYP  258 (271)
Q Consensus       230 l~~l~~~y~~lg~~d~A~~~~~----~l~~~yP  258 (271)
                      ...+..++..+|..|.|.....    .+...||
T Consensus       289 ~~~l~~~l~~~~~~d~a~~~~~~~l~~~~~e~~  321 (327)
T 3cv0_A          289 WDFFRMLLNVMNRPDLVELTYAQNVEPFAKEFG  321 (327)
T ss_dssp             HHHHHHHHHHTTCHHHHHHHTTCCSHHHHHHTT
T ss_pred             HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC
T ss_conf             999999999889999999999982999986227