HHsearch results for GI: 254781174 and protein with PDBid: 3cv0_A
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.68 E-value=2.6e-14 Score=100.29 Aligned_cols=196 Identities=8% Similarity=-0.053 Sum_probs=108.3
Q ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH---
Q ss_conf 89999999999980989999999999985304773026899877887765455567999998875401121101355---
Q gi|254781174|r 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV--- 133 (271)
Q Consensus 57 ~~~lY~~a~~~~~~~~y~~A~~~f~~i~~~~P~s~~a~~A~~~la~~~y~~~~y~~A~~~~~~fi~~~P~s~~~~~A--- 133 (271)
++.++..|..+.+.|++++|+..|++.+...|.+. .+...+|.++...|++++|+..+++.+...|+.+.....
T Consensus 55 ~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~---~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~ 131 (327)
T 3cv0_A 55 EEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDI---AVHAALAVSHTNEHNANAALASLRAWLLSQPQYEQLGSVNLQ 131 (327)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---HHHHHHHHHHHHTTCHHHHHHHHHHHHHTSTTTTTC------
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCH---HHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH
T ss_conf 99999999999987999999999999987398869---999998899987174156999876444027307888765424
Q ss_pred ---------------------HHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
Q ss_conf ---------------------544344455554--------------431112345899999999999852001013456
Q gi|254781174|r 134 ---------------------YYLVGMSYAQMI--------------RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178 (271)
Q Consensus 134 ---------------------~y~~a~~~~~~~--------------~~~~~d~~~~~~A~~~f~~~i~~yP~S~ya~~A 178 (271)
.|..+...+... ......++...+|+..|+..++..|+++.+
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~--- 208 (327)
T 3cv0_A 132 ADVDIDDLNVQSEDFFFAAPNEYRECRTLLHAALEMNPNDAQLHASLGVLYNLSNNYDSAAANLRRAVELRPDDAQL--- 208 (327)
T ss_dssp --------------CCTTSHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH---
T ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHH---
T ss_conf 56666569999999999987789999999999997498620344401221025544999999999988618787999---
Q ss_pred HHHHHHH--------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH---------HHHHH
Q ss_conf 5555555--------------------666666655566666544322345689998865289981---------15999
Q gi|254781174|r 179 RFYVTVG--------------------RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE---------HAEEA 229 (271)
Q Consensus 179 ~~~l~~~--------------------~~~La~~e~~ia~~Y~~~~~y~aA~~~~~~~i~~yp~t~---------~~~eA 229 (271)
...+..+ +..-+.-.+.+|..|.+.|+|..|+..|+.+|...|+.. ....+
T Consensus 209 ~~~lg~~~~~~g~~~eA~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~ai~l~~~~~~~~~~~~~~~~~~~ 288 (327)
T 3cv0_A 209 WNKLGATLANGNRPQEALDAYNRALDINPGYVRVMYNMAVSYSNMSQYDLAAKQLVRAIYMQVGGTTPTGEASREATRSM 288 (327)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCC-----CCTHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
T ss_conf 99999999984789999999999998598989999999999998499999999999998689999872236669999999
Q ss_pred HHHHHHHHHHCCCHHHHHHHHH----HHHHHCC
Q ss_conf 9999999997498799999999----9978569
Q gi|254781174|r 230 MARLVEAYVALALMDEAREVVS----LIQERYP 258 (271)
Q Consensus 230 l~~l~~~y~~lg~~d~A~~~~~----~l~~~yP 258 (271)
...+..++..+|..|.|..... .+...||
T Consensus 289 ~~~l~~~l~~~~~~d~a~~~~~~~l~~~~~e~~ 321 (327)
T 3cv0_A 289 WDFFRMLLNVMNRPDLVELTYAQNVEPFAKEFG 321 (327)
T ss_dssp HHHHHHHHHHTTCHHHHHHHTTCCSHHHHHHTT
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC
T ss_conf 999999999889999999999982999986227