HHsearch results for GI: 254781174 and protein with PDBid: 3ffl_A
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle, cell division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=99.05 E-value=5.2e-10 Score=75.21 Aligned_cols=141 Identities=10% Similarity=-0.034 Sum_probs=108.8
Q ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCC------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
Q ss_conf 899999999999809899999999999853047730------26899877887765455567999998875401121101
Q gi|254781174|r 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV------ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130 (271)
Q Consensus 57 ~~~lY~~a~~~~~~~~y~~A~~~f~~i~~~~P~s~~------a~~A~~~la~~~y~~~~y~~A~~~~~~fi~~~P~s~~~ 130 (271)
...+.+.+......|.|+.|......+....|.++. ..++.+.+|.+++..++|.+|+..|++.+...|
T Consensus 20 ~~~~l~~~~~l~~~G~~~~a~~~~~~ll~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~y~~A~~~~~~al~~~~----- 94 (167)
T 3ffl_A 20 HMNVIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKK----- 94 (167)
T ss_dssp -CCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-----
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH-----
T ss_conf 789999999999865765699999999876025976428989999999999999986679999999999999619-----
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 35554434445555443111234589999999999985200101345655555556666666555666665443223456
Q gi|254781174|r 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210 (271)
Q Consensus 131 ~~A~y~~a~~~~~~~~~~~~d~~~~~~A~~~f~~~i~~yP~S~ya~~A~~~l~~~~~~La~~e~~ia~~Y~~~~~y~aA~ 210 (271)
|+++++ ++...+|+..|++.+...|+.. ++. +.+|..|.+.|++..|+
T Consensus 95 -------~~~~~~--------~~~~~~A~~~~~~al~~~p~~~---~~~--------------~~lg~~~~~~g~~~~Ai 142 (167)
T 3ffl_A 95 -------ALSKTS--------KVRPSTGNSASTPQSQCLPSEI---EVK--------------YKLAECYTVLKQDKDAI 142 (167)
T ss_dssp -------CC----------------------------CCCCHH---HHH--------------HHHHHHHHHTTCHHHHH
T ss_pred -------HHHHHH--------HHHHHHHHHHHHHHHHHCCCCH---HHH--------------HHHHHHHHHCCCHHHHH
T ss_conf -------999998--------7779999999999987493569---999--------------99999999839999999
Q ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHHH
Q ss_conf 8999886528998115999999999999
Q gi|254781174|r 211 PRFQLVLANYSDAEHAEEAMARLVEAYV 238 (271)
Q Consensus 211 ~~~~~~i~~yp~t~~~~eAl~~l~~~y~ 238 (271)
..|+.+... |.+ ++..+.||++|.
T Consensus 143 ~~le~i~~~-~~~---~~~~~~Lg~lY~ 166 (167)
T 3ffl_A 143 AILDGIPSR-QRT---PKINMLLANLYK 166 (167)
T ss_dssp HHHHTSCGG-GCC---HHHHHHHHHHCC
T ss_pred HHHHHHHHC-CCC---HHHHHHHHHHHC
T ss_conf 999999862-899---799999999868