HHsearch results for GI: 254781174 and protein with PDBid: 3ffl_A

>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle, cell division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=99.05  E-value=5.2e-10  Score=75.21  Aligned_cols=141  Identities=10%  Similarity=-0.034  Sum_probs=108.8

Q ss_pred             HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCC------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
Q ss_conf             899999999999809899999999999853047730------26899877887765455567999998875401121101
Q gi|254781174|r   57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV------ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV  130 (271)
Q Consensus        57 ~~~lY~~a~~~~~~~~y~~A~~~f~~i~~~~P~s~~------a~~A~~~la~~~y~~~~y~~A~~~~~~fi~~~P~s~~~  130 (271)
                      ...+.+.+......|.|+.|......+....|.++.      ..++.+.+|.+++..++|.+|+..|++.+...|     
T Consensus        20 ~~~~l~~~~~l~~~G~~~~a~~~~~~ll~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~y~~A~~~~~~al~~~~-----   94 (167)
T 3ffl_A           20 HMNVIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKK-----   94 (167)
T ss_dssp             -CCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-----
T ss_pred             HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH-----
T ss_conf             789999999999865765699999999876025976428989999999999999986679999999999999619-----


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             35554434445555443111234589999999999985200101345655555556666666555666665443223456
Q gi|254781174|r  131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI  210 (271)
Q Consensus       131 ~~A~y~~a~~~~~~~~~~~~d~~~~~~A~~~f~~~i~~yP~S~ya~~A~~~l~~~~~~La~~e~~ia~~Y~~~~~y~aA~  210 (271)
                             |+++++        ++...+|+..|++.+...|+..   ++.              +.+|..|.+.|++..|+
T Consensus        95 -------~~~~~~--------~~~~~~A~~~~~~al~~~p~~~---~~~--------------~~lg~~~~~~g~~~~Ai  142 (167)
T 3ffl_A           95 -------ALSKTS--------KVRPSTGNSASTPQSQCLPSEI---EVK--------------YKLAECYTVLKQDKDAI  142 (167)
T ss_dssp             -------CC----------------------------CCCCHH---HHH--------------HHHHHHHHHTTCHHHHH
T ss_pred             -------HHHHHH--------HHHHHHHHHHHHHHHHHCCCCH---HHH--------------HHHHHHHHHCCCHHHHH
T ss_conf             -------999998--------7779999999999987493569---999--------------99999999839999999


Q ss_pred             HHHHHHHHHCCCCHHHHHHHHHHHHHHH
Q ss_conf             8999886528998115999999999999
Q gi|254781174|r  211 PRFQLVLANYSDAEHAEEAMARLVEAYV  238 (271)
Q Consensus       211 ~~~~~~i~~yp~t~~~~eAl~~l~~~y~  238 (271)
                      ..|+.+... |.+   ++..+.||++|.
T Consensus       143 ~~le~i~~~-~~~---~~~~~~Lg~lY~  166 (167)
T 3ffl_A          143 AILDGIPSR-QRT---PKINMLLANLYK  166 (167)
T ss_dssp             HHHHTSCGG-GCC---HHHHHHHHHHCC
T ss_pred             HHHHHHHHC-CCC---HHHHHHHHHHHC
T ss_conf             999999862-899---799999999868