HHsearch results for GI: 254781174 and protein with PDBid: 3fp2_A
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric regulation, phosphoprotein, TPR repeat; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A
Probab=99.78 E-value=9.3e-17 Score=114.54 Aligned_cols=197 Identities=14% Similarity=0.113 Sum_probs=146.1
Q ss_pred CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
Q ss_conf 36899999999999809899999999999853047730268998778877654555679999988754011211013555
Q gi|254781174|r 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134 (271)
Q Consensus 55 ~~~~~lY~~a~~~~~~~~y~~A~~~f~~i~~~~P~s~~a~~A~~~la~~~y~~~~y~~A~~~~~~fi~~~P~s~~~~~A~ 134 (271)
..+..++..|..++..|+|++|++.|++++...|.+. .+.+.+|.+++..|++++|+..+++.++.+|+++ .++
T Consensus 308 ~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~---~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~---~~~ 381 (537)
T 3fp2_A 308 EYPPTYYHRGQMYFILQDYKNAKEDFQKAQSLNPENV---YPYIQLACLLYKQGKFTESEAFFNETKLKFPTLP---EVP 381 (537)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCS---HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCT---HHH
T ss_pred CCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH---HHH
T ss_conf 4014554012105655222355788999999764010---3334555567752359999999999998689999---999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 44344455554431112345899999999999852001013456555555566666665556666654432234568999
Q gi|254781174|r 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214 (271)
Q Consensus 135 y~~a~~~~~~~~~~~~d~~~~~~A~~~f~~~i~~yP~S~ya~~A~~~l~~~~~~La~~e~~ia~~Y~~~~~y~aA~~~~~ 214 (271)
+.+|.++.. ++...+|+..|+..+...|+++.+......+ ..+..........+..+...+++..|+..|+
T Consensus 382 ~~lg~~~~~--------~g~~~~A~~~~~~al~l~p~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~ 452 (537)
T 3fp2_A 382 TFFAEILTD--------RGDFDTAIKQYDIAKRLEEVQEKIHVGIGPL-IGKATILARQSSQDPTQLDEEKFNAAIKLLT 452 (537)
T ss_dssp HHHHHHHHH--------TTCHHHHHHHHHHHHHHHHHCSSCSSTTHHH-HHHHHHHHHHHTC----CCHHHHHHHHHHHH
T ss_pred HHHHHHHHH--------CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
T ss_conf 999999997--------7999999999999986399999999999999-9865788998765579887658999999999
Q ss_pred HHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHH
Q ss_conf 8865289981159999999999997498799999999997856999789999986
Q gi|254781174|r 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269 (271)
Q Consensus 215 ~~i~~yp~t~~~~eAl~~l~~~y~~lg~~d~A~~~~~~l~~~yP~s~~~~~a~~~ 269 (271)
.+++..|+.+ ++++.||.+|..+|+.++|.+.++....-.|+......+..+
T Consensus 453 kal~l~p~~~---~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~e~~~~~~~ 504 (537)
T 3fp2_A 453 KACELDPRSE---QAKIGLAQLKLQMEKIDEAIELFEDSAILARTMDEKLQATTF 504 (537)
T ss_dssp HHHHHCTTCH---HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--CHHHHHHHHH
T ss_pred HHHHHCCCCH---HHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHH
T ss_conf 9998599989---999999999998599999999999997319997999999999