HHsearch results for GI: 254781174 and protein with PDBid: 3gw4_A
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.49A {Deinococcus radiodurans R1}
Probab=99.33 E-value=1.4e-10 Score=78.44 Aligned_cols=181 Identities=14% Similarity=0.023 Sum_probs=130.3
Q ss_pred HHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC---HHHHHHHHHHHHHHH
Q ss_conf 99809899999999999853047730268998778877654555679999988754011211---013555443444555
Q gi|254781174|r 67 FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK---NVDYVYYLVGMSYAQ 143 (271)
Q Consensus 67 ~~~~~~y~~A~~~f~~i~~~~P~s~~a~~A~~~la~~~y~~~~y~~A~~~~~~fi~~~P~s~---~~~~A~y~~a~~~~~ 143 (271)
.|+.|+|..|.+.++.++...|. ...+.+.+|.+|..+|+|++|+..+++.+...+... ....++..+|.++..
T Consensus 2 a~~~~~y~~A~~~~~~~l~~~~~---~~~a~~~LG~~~~~~g~~~eA~~~~~~a~~~~~~~~~~~~~a~a~~~lg~~~~~ 78 (203)
T 3gw4_A 2 AFEAHDYALAERQAQALLAHPAT---ASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERM 78 (203)
T ss_dssp -----CHHHHHHHHHHHHTSTTT---HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred CHHCCCHHHHHHHHHHHHCCCCC---CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_conf 54247999999999998768975---599999999999987999999999999999898858986899999999999998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---C
Q ss_conf 5443111234589999999999985200101345655555556666666555666665443223456899988652---8
Q gi|254781174|r 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN---Y 220 (271)
Q Consensus 144 ~~~~~~~d~~~~~~A~~~f~~~i~~yP~S~ya~~A~~~l~~~~~~La~~e~~ia~~Y~~~~~y~aA~~~~~~~i~~---y 220 (271)
.+...+|+..++..+..++...-.... .......+|..+...+.+..|...+...+.. -
T Consensus 79 --------~~~~~~A~~~~~~a~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~~~~~~ 140 (203)
T 3gw4_A 79 --------AGNWDAARRCFLEERELLASLPEDPLA----------ASANAYEVATVALHFGDLAGARQEYEKSLVYAQQA 140 (203)
T ss_dssp --------TTCHHHHHHHHHHHHHHHHHSCCCHHH----------HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHT
T ss_pred --------HCCHHHHHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC
T ss_conf --------076777688877888763654211268----------89988757899886110488779999999999874
Q ss_pred CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH---HCCCCHHHHHHHH
Q ss_conf 99811599999999999974987999999999978---5699978999998
Q gi|254781174|r 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE---RYPQGYWARYVET 268 (271)
Q Consensus 221 p~t~~~~eAl~~l~~~y~~lg~~d~A~~~~~~l~~---~yP~s~~~~~a~~ 268 (271)
.+.+....++..||.+|..+|..++|.+.+..-.. +..+........+
T Consensus 141 ~~~~~~a~~~~~Lg~~~~~~g~~~~A~~~~~~Al~l~~~~~d~~~~~~i~~ 191 (203)
T 3gw4_A 141 DDQVAIACAFRGLGDLAQQEKNLLEAQQHWLRARDIFAELEDSEAVNELMT 191 (203)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
T ss_conf 897579999999999999978999999999999999998799899999999