HHsearch results for GI: 254781174 and protein with PDBid: 3ieg_A
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, unfolded protein response; 2.51A {Mus musculus}
Probab=99.63 E-value=4.5e-13 Score=93.08 Aligned_cols=205 Identities=12% Similarity=0.072 Sum_probs=123.6
Q ss_pred CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
Q ss_conf 68999999999998098999999999998530477302689987788776545556799999887540112110135554
Q gi|254781174|r 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135 (271)
Q Consensus 56 ~~~~lY~~a~~~~~~~~y~~A~~~f~~i~~~~P~s~~a~~A~~~la~~~y~~~~y~~A~~~~~~fi~~~P~s~~~~~A~y 135 (271)
.+..++..|..++..|++++|+..|++++...|.. ..+.+.+|.++..+|++++|+..|++.+...|+++....+..
T Consensus 36 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~---~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~ 112 (359)
T 3ieg_A 36 NYIAYYRRATVFLAMGKSKAALPDLTKVIALKMDF---TAARLQRGHLLLKQGKLDEAEDDFKKVLKSNPSEQEEKEAES 112 (359)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC---HHHHHHHHHHHHHHTCHHHHHHHHHHHHTSCCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCC---HHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHCCH
T ss_conf 89999999999998599999999999998729998---999999989987604356799998877504863100010000
Q ss_pred HHHH------------------------HHHHHH--------------HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
Q ss_conf 4344------------------------455554--------------43111234589999999999985200101345
Q gi|254781174|r 136 LVGM------------------------SYAQMI--------------RDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177 (271)
Q Consensus 136 ~~a~------------------------~~~~~~--------------~~~~~d~~~~~~A~~~f~~~i~~yP~S~ya~~ 177 (271)
..+. ..+... .......+...+|+..++..+...|++..+-.
T Consensus 113 ~l~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~ 192 (359)
T 3ieg_A 113 QLVKADEMQRLRSQALDAFDGADYTAAITFLDKILEVCVWDAELRELRAECFIKEGEPRKAISDLKAASKLKSDNTEAFY 192 (359)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSCCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHH
T ss_conf 00126888877999999998526999999999999849442899999999998748840246788999997312478889
Q ss_pred HHHHH-----------HHHHHH------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH-HHH
Q ss_conf 65555-----------555666------------------666655566666544322345689998865289981-159
Q gi|254781174|r 178 ARFYV-----------TVGRNQ------------------LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE-HAE 227 (271)
Q Consensus 178 A~~~l-----------~~~~~~------------------La~~e~~ia~~Y~~~~~y~aA~~~~~~~i~~yp~t~-~~~ 227 (271)
....+ ..+... ........|..+.+.|++..|+..|+.++...|+.. ...
T Consensus 193 ~~~~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~ 272 (359)
T 3ieg_A 193 KISTLYYQLGDHELSLSEVRECLKLDQDHKRCFAHYKQVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPSVAEYTV 272 (359)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
T ss_conf 99999998544999999999999729898999998888998876676544576531588888878899983986310111
Q ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHH
Q ss_conf 999999999997498799999999997856999789
Q gi|254781174|r 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263 (271)
Q Consensus 228 eAl~~l~~~y~~lg~~d~A~~~~~~l~~~yP~s~~~ 263 (271)
.+...++.+|..+|..++|.+.++......|++.+.
T Consensus 273 ~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~ 308 (359)
T 3ieg_A 273 RSKERICHCFSKDEKPVEAIRICSEVLQMEPDNVNA 308 (359)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHH
T ss_conf 000011100002225999999999999849998999