HHsearch results for GI: 254781174 and protein with PDBid: 3ma5_A

>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=98.08  E-value=1.6e-05  Score=48.99  Aligned_cols=72  Identities=17%  Similarity=0.132  Sum_probs=60.9

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             30268998778877654555679999988754011211013555443444555544311123458999999999998520
Q gi|254781174|r   91 GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT  170 (271)
Q Consensus        91 ~~a~~A~~~la~~~y~~~~y~~A~~~~~~fi~~~P~s~~~~~A~y~~a~~~~~~~~~~~~d~~~~~~A~~~f~~~i~~yP  170 (271)
                      |-.+.+.+.+|.+|+..|++++|+..|++.++..|++.   .+++.+|.++..+        +...+|+..|+..++..|
T Consensus         4 P~~~~a~~~lg~~~~~~g~~~~A~~~~~~ai~~~p~~~---~a~~~lg~~~~~~--------g~~~eA~~~y~~al~l~~   72 (100)
T 3ma5_A            4 PEDPFTRYALAQEHLKHDNASRALALFEELVETDPDYV---GTYYHLGKLYERL--------DRTDDAIDTYAQGIEVAR   72 (100)
T ss_dssp             -CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCT---HHHHHHHHHHHHT--------TCHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHH---HHHHHHHHHHHHC--------CCHHHHHHHHHHHHHCCC
T ss_conf             89699999999999995999999999998774496469---9999999999996--------899999999999986487


Q ss_pred             CCH
Q ss_conf             010
Q gi|254781174|r  171 NSP  173 (271)
Q Consensus       171 ~S~  173 (271)
                      +..
T Consensus        73 ~~~   75 (100)
T 3ma5_A           73 EEG   75 (100)
T ss_dssp             HHS
T ss_pred             CCC
T ss_conf             542