HHsearch results for GI: 254781174 and protein with PDBid: 3ma5_A
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=98.08 E-value=1.6e-05 Score=48.99 Aligned_cols=72 Identities=17% Similarity=0.132 Sum_probs=60.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 30268998778877654555679999988754011211013555443444555544311123458999999999998520
Q gi|254781174|r 91 GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170 (271)
Q Consensus 91 ~~a~~A~~~la~~~y~~~~y~~A~~~~~~fi~~~P~s~~~~~A~y~~a~~~~~~~~~~~~d~~~~~~A~~~f~~~i~~yP 170 (271)
|-.+.+.+.+|.+|+..|++++|+..|++.++..|++. .+++.+|.++..+ +...+|+..|+..++..|
T Consensus 4 P~~~~a~~~lg~~~~~~g~~~~A~~~~~~ai~~~p~~~---~a~~~lg~~~~~~--------g~~~eA~~~y~~al~l~~ 72 (100)
T 3ma5_A 4 PEDPFTRYALAQEHLKHDNASRALALFEELVETDPDYV---GTYYHLGKLYERL--------DRTDDAIDTYAQGIEVAR 72 (100)
T ss_dssp -CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCT---HHHHHHHHHHHHT--------TCHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHH---HHHHHHHHHHHHC--------CCHHHHHHHHHHHHHCCC
T ss_conf 89699999999999995999999999998774496469---9999999999996--------899999999999986487
Q ss_pred CCH
Q ss_conf 010
Q gi|254781174|r 171 NSP 173 (271)
Q Consensus 171 ~S~ 173 (271)
+..
T Consensus 73 ~~~ 75 (100)
T 3ma5_A 73 EEG 75 (100)
T ss_dssp HHS
T ss_pred CCC
T ss_conf 542