HHsearch results for GI: 254781174 and protein with PDBid: 3mv2_B

>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=99.50  E-value=2.9e-13  Score=94.21  Aligned_cols=176  Identities=11%  Similarity=0.027  Sum_probs=143.7

Q ss_pred             HHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
Q ss_conf             99999999980989999999999985304773026899877887765455567999998875401121101355544344
Q gi|254781174|r   60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM  139 (271)
Q Consensus        60 lY~~a~~~~~~~~y~~A~~~f~~i~~~~P~s~~a~~A~~~la~~~y~~~~y~~A~~~~~~fi~~~P~s~~~~~A~y~~a~  139 (271)
                      .+.+|...+..+.+.+|+..+++++...|.+   +.+++.+|.++..+|++++|+..+++.++..|+... ..++..+|.
T Consensus        69 ~~~~~~~l~~~~~~~~A~~~~~~~l~~~p~~---~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~-~~~~~~~~~  144 (310)
T 3mv2_B           69 KLGKVLDLYVQFLDTKNIEELENLLKDKQNS---PYELYLLATAQAILGDLDKSLETCVEGIDNDEAEGT-TELLLLAIE  144 (310)
T ss_dssp             TTHHHHHHHHHHHTTTCCHHHHHTTTTSCCC---HHHHHHHHHHHHHHTCHHHHHHHHHHHHTSSCSTTH-HHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC---HHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCH-HHHHHHHHH
T ss_conf             9999999999872588999999987509999---999999999999848738899999999863876322-999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             45555443111234589999999999985200101345655555556666666555666665443223456899988652
Q gi|254781174|r  140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN  219 (271)
Q Consensus       140 ~~~~~~~~~~~d~~~~~~A~~~f~~~i~~yP~S~ya~~A~~~l~~~~~~La~~e~~ia~~Y~~~~~y~aA~~~~~~~i~~  219 (271)
                      ++..        .+...+|...|+..++..|+++-...-.  +    ..++   ...+..+...+++..|+..++.+...
T Consensus       145 ~~~~--------~g~~~~A~~~~~~al~~~~~~~~~~~~~--~----~~l~---~~~~~~~~~~~~~~~A~~~~~~l~~~  207 (310)
T 3mv2_B          145 VALL--------NNNVSTASTIFDNYTNAIEDTVSGDNEM--I----LNLA---ESYIKFATNKETATSNFYYYEELSQT  207 (310)
T ss_dssp             HHHH--------TTCHHHHHHHHHHHHHHSCHHHHHHHHH--H----HHHH---HHHHHHHHTCSTTTHHHHHHHHHHTT
T ss_pred             HHHH--------CCCHHHHHHHHHHHHHHCCCCCCCHHHH--H----HHHH---HHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             9998--------5999999999999986190342201499--9----9999---99999998700499999999998864


Q ss_pred             CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
Q ss_conf             89981159999999999997498799999999997856999
Q gi|254781174|r  220 YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG  260 (271)
Q Consensus       220 yp~t~~~~eAl~~l~~~y~~lg~~d~A~~~~~~l~~~yP~s  260 (271)
                      .|+    ..++..++.+|..+|..++|...+.......|+.
T Consensus       208 ~~~----~~~~~~la~~~~~~g~~~eA~~~~~~al~~~~~~  244 (310)
T 3mv2_B          208 FPT----WKTQLGLLNLHLQQRNIAEAQGIVELLLSDYYSV  244 (310)
T ss_dssp             SCS----HHHHHHHHHHHHHHTCHHHHHHHHHHHHSHHHHT
T ss_pred             CCC----HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
T ss_conf             997----9999999999998699899999999998629022