HHsearch results for GI: 254781174 and protein with PDBid: 3n71_A
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.77 E-value=5.2e-07 Score=57.68 Aligned_cols=138 Identities=9% Similarity=0.068 Sum_probs=91.1
Q ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHC-----CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-----CC
Q ss_conf 8999999999998098999999999998530-----4773026899877887765455567999998875401-----12
Q gi|254781174|r 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDF-----PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY-----PE 126 (271)
Q Consensus 57 ~~~lY~~a~~~~~~~~y~~A~~~f~~i~~~~-----P~s~~a~~A~~~la~~~y~~~~y~~A~~~~~~fi~~~-----P~ 126 (271)
.....+.+......|+|.+|+..+++..... |.++......-.+|.++..+|+|++|+..+++.++.+ |+
T Consensus 309 ~~~~~e~~~~~~~~~~~~ea~~l~~~~L~~~~~il~~~h~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~ 388 (490)
T 3n71_A 309 SKDTLEKIDKARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHN 388 (490)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTT
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 66667878766633677888999999999987506996277899999999999987798899999999999999976999
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 1101355544344455554431112345899999999999852-----00101345655555556666666555666665
Q gi|254781174|r 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY-----TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201 (271)
Q Consensus 127 s~~~~~A~y~~a~~~~~~~~~~~~d~~~~~~A~~~f~~~i~~y-----P~S~ya~~A~~~l~~~~~~La~~e~~ia~~Y~ 201 (271)
||.+..+++.+|.++..+ +...+|+..+++.++-. |++|.+.+... .+|..|.
T Consensus 389 h~~~a~~~~~lg~~~~~~--------~~~~~A~~~~~kAl~i~~~~~G~~hp~~~~l~~--------------~l~~~~~ 446 (490)
T 3n71_A 389 NAQLGMAVMRAGLTNWHA--------GHIEVGHGMICKAYAILLVTHGPSHPITKDLEA--------------MRMQTEM 446 (490)
T ss_dssp CHHHHHHHHHHHHHHHHT--------TCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHH--------------HHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHC--------CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH--------------HHHHHHH
T ss_conf 989999999999999987--------898999999999999999974999842999999--------------9999999
Q ss_pred HHHHHHHHHHHHHHH
Q ss_conf 443223456899988
Q gi|254781174|r 202 KRGEYVAAIPRFQLV 216 (271)
Q Consensus 202 ~~~~y~aA~~~~~~~ 216 (271)
+.++|..|...|+.+
T Consensus 447 ~l~~~~~a~~~~~~~ 461 (490)
T 3n71_A 447 ELRMFRQNEFMYHKM 461 (490)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
T ss_conf 986578889999999