BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254781174|ref|YP_003065587.1| outer membrane assembly
lipoprotein YfiO [Candidatus Liberibacter asiaticus str. psy62]
(271 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
>gi|260462098|ref|ZP_05810342.1| outer membrane assembly lipoprotein YfiO [Mesorhizobium
opportunistum WSM2075]
gi|259031958|gb|EEW33225.1| outer membrane assembly lipoprotein YfiO [Mesorhizobium
opportunistum WSM2075]
Length = 362
Score = 146 bits (366), Expect = 4e-33, Method: Composition-based stats.
Identities = 84/266 (31%), Positives = 133/266 (50%), Gaps = 8/266 (3%)
Query: 14 AWAYQ--------LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAV 65
++ L L + + FL V +Y + +
Sbjct: 73 IMFFKRVGQSKAPLRSVFLALSVVVPSLFLSACMSSEKDIDLSTYVDQTEPADVLYNQGL 132
Query: 66 LFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP 125
L +A + F+ R P++ ARKS++M AF Y G Y +A S + Y+ YP
Sbjct: 133 ANLNAGRLDEASKKFDAVDRQHPYSEWARKSMVMGAFADYRKGSYDEAISSAKRYLALYP 192
Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
+ + Y Y++G+SY + I+DV DQ+ + LQ M +V R+ S YV A+ +
Sbjct: 193 STDDAPYAQYIIGLSYYRQIKDVTQDQKEARQTLQTMQDLVTRWPTSEYVDDAKEKIRFA 252
Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
+QLA KE++IGRYYL+R EY+AA+ RF+ V+ NYS+ H EEA+ARL E+Y A+ L E
Sbjct: 253 NDQLAGKEMQIGRYYLERREYIAAVKRFRTVVENYSNTRHVEEALARLTESYYAMGLTSE 312
Query: 246 AREVVSLIQERYPQGYWARYVETLVK 271
A+ +++ YP W + L++
Sbjct: 313 AQTAAAVLGTNYPDSPWYKDSYKLLQ 338
>gi|83592277|ref|YP_426029.1| competence lipoprotein ComL [Rhodospirillum rubrum ATCC 11170]
gi|83575191|gb|ABC21742.1| competence lipoprotein ComL, putative [Rhodospirillum rubrum ATCC
11170]
Length = 292
Score = 145 bits (365), Expect = 5e-33, Method: Composition-based stats.
Identities = 73/251 (29%), Positives = 129/251 (51%), Gaps = 5/251 (1%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
++ F L + Y++ R E+Y +AV L +++ A +
Sbjct: 19 FRALAAAFLIGGALALSACSSKKDEPEYVE-----RPVEELYNEAVDLLNTSSYALAAKA 73
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
F++ R P++ A K+ +MSA+ Y Y A +I +P ++++ Y YYL G+
Sbjct: 74 FDEVERQHPYSSWATKAQIMSAYALYENEAYDDAVVAINRFIELHPGNRDIAYAYYLRGL 133
Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
Y + I DV DQ+ T+ + + +V R+ +SPY + AR + + R+ +A KE+ +GR+
Sbjct: 134 CYYEQISDVRRDQQITRQAMSNLRDVVTRFPDSPYARDARLKIDLARDHIAGKEMSVGRF 193
Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
YLKR +++AA+ RF++V+ Y H EA+ R+VE L L DEA+ V +++ +P
Sbjct: 194 YLKRQDFLAALNRFRVVVEQYDQTTHVPEALYRMVEINTLLGLPDEAKRVAAVLGHNFPG 253
Query: 260 GYWARYVETLV 270
W L+
Sbjct: 254 SDWYGDAYRLI 264
>gi|56552654|ref|YP_163493.1| outer membrane assembly lipoprotein YfiO [Zymomonas mobilis subsp.
mobilis ZM4]
gi|4378163|gb|AAD19408.1| unknown [Zymomonas mobilis subsp. mobilis ZM4]
gi|56544228|gb|AAV90382.1| outer membrane assembly lipoprotein YfiO [Zymomonas mobilis subsp.
mobilis ZM4]
Length = 346
Score = 145 bits (364), Expect = 7e-33, Method: Composition-based stats.
Identities = 74/257 (28%), Positives = 128/257 (49%), Gaps = 2/257 (0%)
Query: 15 WAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFS 74
A + + + +IA+ + G + + D+ R +Y L +
Sbjct: 1 MASKFSRSLVIALTAIAILPMAGCAGRGKKKT--DTRYVARDVDTLYNAGKQSLDSGQYK 58
Query: 75 KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
A +F++ R P++ AR++ LMSAF Y A Y + + + +++ + +K+ Y
Sbjct: 59 AAAAFFDEVERQHPYSIWARRAQLMSAFCNYRARNYSASIASAQRFLSIHTGNKDAPYAM 118
Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
YLV M Y + I+DV +DQ T+L L M+ I+ RY ++PY AR + + + L KE+
Sbjct: 119 YLVMMDYYEQIQDVNHDQHTTQLALDSMNDIIRRYPDTPYAADARLKMDLVHDHLGGKEM 178
Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
IGR+Y + ++AA RF+ V+ Y + EA+ RL E+Y+AL L EAR +++
Sbjct: 179 AIGRFYEQSRLWLAATLRFRRVIDEYQTTTYVPEALERLTESYLALGLRAEARNAAAVLG 238
Query: 255 ERYPQGYWARYVETLVK 271
+P W L+K
Sbjct: 239 ANFPGSKWYSRAYHLIK 255
>gi|241762104|ref|ZP_04760187.1| outer membrane assembly lipoprotein YfiO [Zymomonas mobilis subsp.
mobilis ATCC 10988]
gi|241373354|gb|EER62954.1| outer membrane assembly lipoprotein YfiO [Zymomonas mobilis subsp.
mobilis ATCC 10988]
Length = 346
Score = 144 bits (361), Expect = 1e-32, Method: Composition-based stats.
Identities = 73/257 (28%), Positives = 128/257 (49%), Gaps = 2/257 (0%)
Query: 15 WAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFS 74
A + + + +IA+ + G + + D+ R +Y L +
Sbjct: 1 MASKFSRSLVIALTAIAILPMAGCAGRGKKKT--DTRYVARDVDTLYNAGKQSLDSGQYK 58
Query: 75 KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
A +F++ R P++ AR++ LMSAF Y A Y + + + +++ + +K+ Y
Sbjct: 59 AAAAFFDEVERQHPYSIWARRAQLMSAFCNYRARNYSASIASAQRFLSIHTGNKDAPYAM 118
Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
YLV M Y + I+DV +DQ T+L L M+ I+ RY ++PY AR + + + L KE+
Sbjct: 119 YLVMMDYYEQIQDVNHDQHTTQLALDSMNDIIRRYPDTPYAADARLKMDLVHDHLGGKEM 178
Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
IGR+Y + ++AA RF+ V+ Y + EA+ RL E+Y+A+ L EAR +++
Sbjct: 179 AIGRFYEQSRLWLAATLRFRRVIDEYQTTTYVPEALERLTESYLAMGLRVEARNAAAVLG 238
Query: 255 ERYPQGYWARYVETLVK 271
+P W L+K
Sbjct: 239 ANFPGSKWYSRAYHLIK 255
>gi|260753695|ref|YP_003226588.1| outer membrane assembly lipoprotein YfiO [Zymomonas mobilis subsp.
mobilis NCIMB 11163]
gi|258553058|gb|ACV76004.1| outer membrane assembly lipoprotein YfiO [Zymomonas mobilis subsp.
mobilis NCIMB 11163]
Length = 346
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 73/257 (28%), Positives = 128/257 (49%), Gaps = 2/257 (0%)
Query: 15 WAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFS 74
A + + + +IA+ + G + + D+ R +Y L +
Sbjct: 1 MASKFSRSLVIALTAIAILPMAGCAGRGKKKT--DTRYVARDVDTLYNAGKQSLDSGQYK 58
Query: 75 KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
A +F++ R P++ AR++ LMSAF Y A Y + + + +++ + +K+ Y
Sbjct: 59 AAAAFFDEVERQHPYSIWARRAQLMSAFCNYRARNYSASIASAQRFLSIHTGNKDAPYAM 118
Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
YLV M Y + I+DV +DQ T+L L M+ I+ RY ++PY AR + + + L KE+
Sbjct: 119 YLVMMDYYEQIQDVNHDQHTTQLALDSMNDIIRRYPDTPYAADARLKMDLVHDHLGGKEM 178
Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
IGR+Y + ++AA RF+ V+ Y + EA+ RL E+Y+A+ L EAR +++
Sbjct: 179 AIGRFYEQSRLWLAATLRFRRVIDEYQTTTYVPEALERLTESYLAMGLRVEARNAAAVLG 238
Query: 255 ERYPQGYWARYVETLVK 271
+P W L+K
Sbjct: 239 ANFPGSKWYSRAYHLIK 255
>gi|17986870|ref|NP_539504.1| COML, competence lipoprotein [Brucella melitensis bv. 1 str. 16M]
gi|17982509|gb|AAL51768.1| coml, competence lipoprotein [Brucella melitensis bv. 1 str. 16M]
Length = 309
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 90/251 (35%), Positives = 138/251 (54%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
K AL + L G ++ V + ++Y + + L +A + F
Sbjct: 33 KTALLSGTIAVLIPLAGCASKNDDIDLTKYVETIDPADKLYNEGLANLDAGRLDEAAKKF 92
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
R P+ ARK+L+M+AF Y G Y++A S+ + Y T YP S Y YY++G+S
Sbjct: 93 AAIDRQHPYTEWARKALVMAAFTNYRKGNYEEAISMAKRYNTLYPTSPESAYAYYIIGLS 152
Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
Y + I DV DQ A++ + M +++R+ NS Y A+ + V R+QLA KE++IGRYY
Sbjct: 153 YFRQIPDVTRDQAASRRAIAAMQEVIDRFPNSEYTDDAKTKIRVARDQLAGKEMQIGRYY 212
Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
L+R EY+AAI RF+ V+ YS+ EEA+ARLVEAY AL L EA+ S++ + +P
Sbjct: 213 LERKEYLAAIKRFRGVVEEYSNTRQVEEALARLVEAYYALGLTSEAQMAASVLGKNFPDS 272
Query: 261 YWARYVETLVK 271
W + L++
Sbjct: 273 QWYKDSYKLLQ 283
>gi|23502293|ref|NP_698420.1| competence protein ComL [Brucella suis 1330]
gi|62290315|ref|YP_222108.1| competence protein ComL [Brucella abortus bv. 1 str. 9-941]
gi|82700239|ref|YP_414813.1| TPR repeat-containing protein [Brucella melitensis biovar Abortus
2308]
gi|161619370|ref|YP_001593257.1| hypothetical protein BCAN_A1455 [Brucella canis ATCC 23365]
gi|163843677|ref|YP_001628081.1| hypothetical protein BSUIS_A1473 [Brucella suis ATCC 23445]
gi|189024549|ref|YP_001935317.1| TPR repeat-containing protein [Brucella abortus S19]
gi|225852904|ref|YP_002733137.1| outer membrane assembly lipoprotein YfiO [Brucella melitensis ATCC
23457]
gi|254689617|ref|ZP_05152871.1| COML, competence lipoprotein [Brucella abortus bv. 6 str. 870]
gi|254694107|ref|ZP_05155935.1| COML, competence lipoprotein [Brucella abortus bv. 3 str. Tulya]
gi|254697759|ref|ZP_05159587.1| COML, competence lipoprotein [Brucella abortus bv. 2 str. 86/8/59]
gi|254702144|ref|ZP_05163972.1| COML, competence lipoprotein [Brucella suis bv. 5 str. 513]
gi|254704680|ref|ZP_05166508.1| COML, competence lipoprotein [Brucella suis bv. 3 str. 686]
gi|254708095|ref|ZP_05169923.1| COML, competence lipoprotein [Brucella pinnipedialis M163/99/10]
gi|254710464|ref|ZP_05172275.1| COML, competence lipoprotein [Brucella pinnipedialis B2/94]
gi|254714457|ref|ZP_05176268.1| COML, competence lipoprotein [Brucella ceti M644/93/1]
gi|254717355|ref|ZP_05179166.1| COML, competence lipoprotein [Brucella ceti M13/05/1]
gi|254730648|ref|ZP_05189226.1| COML, competence lipoprotein [Brucella abortus bv. 4 str. 292]
gi|256031958|ref|ZP_05445572.1| COML, competence lipoprotein [Brucella pinnipedialis M292/94/1]
gi|256045053|ref|ZP_05447954.1| COML, competence lipoprotein [Brucella melitensis bv. 1 str. Rev.1]
gi|256061480|ref|ZP_05451624.1| COML, competence lipoprotein [Brucella neotomae 5K33]
gi|256113976|ref|ZP_05454759.1| COML, competence lipoprotein [Brucella melitensis bv. 3 str. Ether]
gi|256160157|ref|ZP_05457851.1| COML, competence lipoprotein [Brucella ceti M490/95/1]
gi|256255363|ref|ZP_05460899.1| COML, competence lipoprotein [Brucella ceti B1/94]
gi|256263614|ref|ZP_05466146.1| TPR repeat-containing protein [Brucella melitensis bv. 2 str. 63/9]
gi|256369838|ref|YP_003107349.1| competence protein ComL [Brucella microti CCM 4915]
gi|260169095|ref|ZP_05755906.1| COML, competence lipoprotein [Brucella sp. F5/99]
gi|260546858|ref|ZP_05822597.1| TPR repeat-containing protein [Brucella abortus NCTC 8038]
gi|260565348|ref|ZP_05835832.1| TPR repeat-containing protein [Brucella melitensis bv. 1 str. 16M]
gi|260566072|ref|ZP_05836542.1| TPR repeat-containing protein [Brucella suis bv. 4 str. 40]
gi|260755144|ref|ZP_05867492.1| competence protein ComL [Brucella abortus bv. 6 str. 870]
gi|260758363|ref|ZP_05870711.1| competence protein ComL [Brucella abortus bv. 4 str. 292]
gi|260762189|ref|ZP_05874532.1| competence protein ComL [Brucella abortus bv. 2 str. 86/8/59]
gi|261214405|ref|ZP_05928686.1| competence protein ComL [Brucella abortus bv. 3 str. Tulya]
gi|261219185|ref|ZP_05933466.1| competence protein ComL [Brucella ceti M13/05/1]
gi|261222564|ref|ZP_05936845.1| competence protein ComL [Brucella ceti B1/94]
gi|261315597|ref|ZP_05954794.1| competence protein ComL [Brucella pinnipedialis M163/99/10]
gi|261318035|ref|ZP_05957232.1| competence protein ComL [Brucella pinnipedialis B2/94]
gi|261322246|ref|ZP_05961443.1| competence protein ComL [Brucella ceti M644/93/1]
gi|261325486|ref|ZP_05964683.1| competence protein ComL [Brucella neotomae 5K33]
gi|261752713|ref|ZP_05996422.1| competence protein ComL [Brucella suis bv. 5 str. 513]
gi|261755373|ref|ZP_05999082.1| competence protein ComL [Brucella suis bv. 3 str. 686]
gi|261758600|ref|ZP_06002309.1| TPR repeat-containing protein [Brucella sp. F5/99]
gi|265989066|ref|ZP_06101623.1| competence protein ComL [Brucella pinnipedialis M292/94/1]
gi|265991479|ref|ZP_06104036.1| competence protein ComL [Brucella melitensis bv. 1 str. Rev.1]
gi|265995317|ref|ZP_06107874.1| competence protein ComL [Brucella melitensis bv. 3 str. Ether]
gi|265998529|ref|ZP_06111086.1| competence protein ComL [Brucella ceti M490/95/1]
gi|294852749|ref|ZP_06793422.1| UPF0169 lipoprotein [Brucella sp. NVSL 07-0026]
gi|297248702|ref|ZP_06932420.1| lipoprotein [Brucella abortus bv. 5 str. B3196]
gi|23348269|gb|AAN30335.1| competence protein ComL, putative [Brucella suis 1330]
gi|62196447|gb|AAX74747.1| ComL, hypothetical competence protein [Brucella abortus bv. 1 str.
9-941]
gi|82616340|emb|CAJ11397.1| TPR repeat:Protein of unknown function UPF0169 [Brucella melitensis
biovar Abortus 2308]
gi|161336181|gb|ABX62486.1| Hypothetical protein BCAN_A1455 [Brucella canis ATCC 23365]
gi|163674400|gb|ABY38511.1| Hypothetical protein BSUIS_A1473 [Brucella suis ATCC 23445]
gi|189020121|gb|ACD72843.1| TPR repeat-containing protein [Brucella abortus S19]
gi|225641269|gb|ACO01183.1| outer membrane assembly lipoprotein YfiO [Brucella melitensis ATCC
23457]
gi|256000001|gb|ACU48400.1| competence protein ComL [Brucella microti CCM 4915]
gi|260095908|gb|EEW79785.1| TPR repeat-containing protein [Brucella abortus NCTC 8038]
gi|260151416|gb|EEW86510.1| TPR repeat-containing protein [Brucella melitensis bv. 1 str. 16M]
gi|260155590|gb|EEW90670.1| TPR repeat-containing protein [Brucella suis bv. 4 str. 40]
gi|260668681|gb|EEX55621.1| competence protein ComL [Brucella abortus bv. 4 str. 292]
gi|260672621|gb|EEX59442.1| competence protein ComL [Brucella abortus bv. 2 str. 86/8/59]
gi|260675252|gb|EEX62073.1| competence protein ComL [Brucella abortus bv. 6 str. 870]
gi|260916012|gb|EEX82873.1| competence protein ComL [Brucella abortus bv. 3 str. Tulya]
gi|260921148|gb|EEX87801.1| competence protein ComL [Brucella ceti B1/94]
gi|260924274|gb|EEX90842.1| competence protein ComL [Brucella ceti M13/05/1]
gi|261294936|gb|EEX98432.1| competence protein ComL [Brucella ceti M644/93/1]
gi|261297258|gb|EEY00755.1| competence protein ComL [Brucella pinnipedialis B2/94]
gi|261301466|gb|EEY04963.1| competence protein ComL [Brucella neotomae 5K33]
gi|261304623|gb|EEY08120.1| competence protein ComL [Brucella pinnipedialis M163/99/10]
gi|261738584|gb|EEY26580.1| TPR repeat-containing protein [Brucella sp. F5/99]
gi|261742466|gb|EEY30392.1| competence protein ComL [Brucella suis bv. 5 str. 513]
gi|261745126|gb|EEY33052.1| competence protein ComL [Brucella suis bv. 3 str. 686]
gi|262553153|gb|EEZ08987.1| competence protein ComL [Brucella ceti M490/95/1]
gi|262766430|gb|EEZ12219.1| competence protein ComL [Brucella melitensis bv. 3 str. Ether]
gi|263002263|gb|EEZ14838.1| competence protein ComL [Brucella melitensis bv. 1 str. Rev.1]
gi|263093666|gb|EEZ17671.1| TPR repeat-containing protein [Brucella melitensis bv. 2 str. 63/9]
gi|264661263|gb|EEZ31524.1| competence protein ComL [Brucella pinnipedialis M292/94/1]
gi|294821338|gb|EFG38337.1| UPF0169 lipoprotein [Brucella sp. NVSL 07-0026]
gi|297175871|gb|EFH35218.1| lipoprotein [Brucella abortus bv. 5 str. B3196]
gi|326409446|gb|ADZ66511.1| TPR repeat-containing protein [Brucella melitensis M28]
gi|326539152|gb|ADZ87367.1| outer membrane assembly lipoprotein YfiO [Brucella melitensis
M5-90]
Length = 287
Score = 143 bits (359), Expect = 2e-32, Method: Composition-based stats.
Identities = 90/251 (35%), Positives = 138/251 (54%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
K AL + L G ++ V + ++Y + + L +A + F
Sbjct: 11 KTALLSGTIAVLIPLAGCASKNDDIDLTKYVETIDPADKLYNEGLANLDAGRLDEAAKKF 70
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
R P+ ARK+L+M+AF Y G Y++A S+ + Y T YP S Y YY++G+S
Sbjct: 71 AAIDRQHPYTEWARKALVMAAFTNYRKGNYEEAISMAKRYNTLYPTSPESAYAYYIIGLS 130
Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
Y + I DV DQ A++ + M +++R+ NS Y A+ + V R+QLA KE++IGRYY
Sbjct: 131 YFRQIPDVTRDQAASRRAIAAMQEVIDRFPNSEYTDDAKTKIRVARDQLAGKEMQIGRYY 190
Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
L+R EY+AAI RF+ V+ YS+ EEA+ARLVEAY AL L EA+ S++ + +P
Sbjct: 191 LERKEYLAAIKRFRGVVEEYSNTRQVEEALARLVEAYYALGLTSEAQMAASVLGKNFPDS 250
Query: 261 YWARYVETLVK 271
W + L++
Sbjct: 251 QWYKDSYKLLQ 261
>gi|148558858|ref|YP_001259314.1| putative competence protein ComL [Brucella ovis ATCC 25840]
gi|148370115|gb|ABQ60094.1| putative competence protein ComL [Brucella ovis ATCC 25840]
Length = 287
Score = 143 bits (359), Expect = 3e-32, Method: Composition-based stats.
Identities = 90/251 (35%), Positives = 137/251 (54%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
K AL + L G ++ V + ++Y + + L +A + F
Sbjct: 11 KTALLSGTIAVLIPLAGCASKNDDIDLTKYVETINPADKLYNEGLANLDAGRLDEAAKKF 70
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
R P+ ARK+L+M+AF Y G Y++A S+ + Y T YP S Y YY++G+S
Sbjct: 71 AAIDRQHPYTEWARKALVMAAFTNYRKGNYEEAISMAKRYNTLYPTSPESAYAYYIIGLS 130
Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
Y I DV DQ A++ + M +++R+ NS Y A+ + V R+QLA KE++IGRYY
Sbjct: 131 YFHQIPDVTRDQAASRRAIAAMQEVIDRFPNSEYTDDAKTKIRVARDQLAGKEMQIGRYY 190
Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
L+R EY+AAI RF+ V+ YS+ EEA+ARLVEAY AL L EA+ S++ + +P
Sbjct: 191 LERKEYLAAIKRFRGVVEEYSNTRQVEEALARLVEAYYALGLTSEAQMAASVLGKNFPDS 250
Query: 261 YWARYVETLVK 271
W + L++
Sbjct: 251 QWYKDSYKLLQ 261
>gi|254719454|ref|ZP_05181265.1| COML, competence lipoprotein [Brucella sp. 83/13]
gi|265984459|ref|ZP_06097194.1| competence protein ComL [Brucella sp. 83/13]
gi|306839231|ref|ZP_07472048.1| outer membrane assembly lipoprotein YfiO [Brucella sp. NF 2653]
gi|306843231|ref|ZP_07475841.1| outer membrane assembly lipoprotein YfiO [Brucella sp. BO2]
gi|306844321|ref|ZP_07476913.1| outer membrane assembly lipoprotein YfiO [Brucella sp. BO1]
gi|264663051|gb|EEZ33312.1| competence protein ComL [Brucella sp. 83/13]
gi|306275393|gb|EFM57134.1| outer membrane assembly lipoprotein YfiO [Brucella sp. BO1]
gi|306286554|gb|EFM58133.1| outer membrane assembly lipoprotein YfiO [Brucella sp. BO2]
gi|306405778|gb|EFM62040.1| outer membrane assembly lipoprotein YfiO [Brucella sp. NF 2653]
Length = 287
Score = 143 bits (358), Expect = 4e-32, Method: Composition-based stats.
Identities = 90/251 (35%), Positives = 138/251 (54%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
K AL + L G ++ V + ++Y + + L +A + F
Sbjct: 11 KTALLSGAIAVLIPLAGCASKNDDIDLTKYVETIDPADKLYNEGLANLDAGRLDEAAKKF 70
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
R P+ ARK+L+M+AF Y G Y++A S+ + Y T YP S Y YY++G+S
Sbjct: 71 AAIDRQHPYTEWARKALVMAAFTNYRKGNYEEAISMAKRYNTLYPTSPESAYAYYIIGLS 130
Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
Y + I DV DQ A++ + M +++R+ NS Y A+ + V R+QLA KE++IGRYY
Sbjct: 131 YFRQIPDVTRDQAASRRAIAAMQEVIDRFPNSEYTDDAKTKIRVARDQLAGKEMQIGRYY 190
Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
L+R EY+AAI RF+ V+ YS+ EEA+ARLVEAY AL L EA+ S++ + +P
Sbjct: 191 LERKEYLAAIKRFRGVVEEYSNTRQVEEALARLVEAYYALGLTSEAQMAASVLGKNFPDS 250
Query: 261 YWARYVETLVK 271
W + L++
Sbjct: 251 QWYKDSYKLLQ 261
>gi|225627872|ref|ZP_03785909.1| outer membrane assembly lipoprotein YfiO [Brucella ceti str. Cudo]
gi|237815822|ref|ZP_04594819.1| outer membrane assembly lipoprotein YfiO [Brucella abortus str.
2308 A]
gi|225617877|gb|EEH14922.1| outer membrane assembly lipoprotein YfiO [Brucella ceti str. Cudo]
gi|237789120|gb|EEP63331.1| outer membrane assembly lipoprotein YfiO [Brucella abortus str.
2308 A]
Length = 323
Score = 143 bits (358), Expect = 4e-32, Method: Composition-based stats.
Identities = 90/251 (35%), Positives = 138/251 (54%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
K AL + L G ++ V + ++Y + + L +A + F
Sbjct: 47 KTALLSGTIAVLIPLAGCASKNDDIDLTKYVETIDPADKLYNEGLANLDAGRLDEAAKKF 106
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
R P+ ARK+L+M+AF Y G Y++A S+ + Y T YP S Y YY++G+S
Sbjct: 107 AAIDRQHPYTEWARKALVMAAFTNYRKGNYEEAISMAKRYNTLYPTSPESAYAYYIIGLS 166
Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
Y + I DV DQ A++ + M +++R+ NS Y A+ + V R+QLA KE++IGRYY
Sbjct: 167 YFRQIPDVTRDQAASRRAIAAMQEVIDRFPNSEYTDDAKTKIRVARDQLAGKEMQIGRYY 226
Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
L+R EY+AAI RF+ V+ YS+ EEA+ARLVEAY AL L EA+ S++ + +P
Sbjct: 227 LERKEYLAAIKRFRGVVEEYSNTRQVEEALARLVEAYYALGLTSEAQMAASVLGKNFPDS 286
Query: 261 YWARYVETLVK 271
W + L++
Sbjct: 287 QWYKDSYKLLQ 297
>gi|239832301|ref|ZP_04680630.1| outer membrane assembly lipoprotein YfiO [Ochrobactrum intermedium
LMG 3301]
gi|239824568|gb|EEQ96136.1| outer membrane assembly lipoprotein YfiO [Ochrobactrum intermedium
LMG 3301]
Length = 287
Score = 142 bits (357), Expect = 4e-32, Method: Composition-based stats.
Identities = 90/251 (35%), Positives = 136/251 (54%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
K AL + L G + V + ++Y + + L +A + F
Sbjct: 11 KTALLTGAIAVLIPLAGCASKDDDIDLTKYVETIDPADKLYNEGLANLDAGRLDEAAKKF 70
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
R P+ ARKSL+M+AF Y G Y++A S+ + Y T YP S Y YY++G+S
Sbjct: 71 AAVDRQHPYTEWARKSLVMAAFTNYRKGNYEEAISMAKRYNTLYPTSPESAYAYYIIGLS 130
Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
Y + I DV DQ A++ + M +V+R+ +S Y A+ + R+QLA KE+++GRYY
Sbjct: 131 YFRQIPDVTRDQAASRRAIAAMQEVVDRFPDSEYTDDAKAKIRFARDQLAGKEMQVGRYY 190
Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
L+R EY+AAI RF+ V+ YS+ EEA+ARLVEAY AL L EA+ S++ + YP
Sbjct: 191 LERKEYLAAIKRFRGVVEEYSNTRQVEEALARLVEAYYALGLTSEAQMAASVLGKNYPDS 250
Query: 261 YWARYVETLVK 271
W + L++
Sbjct: 251 QWYKDSYKLLQ 261
>gi|153009082|ref|YP_001370297.1| competence protein ComL [Ochrobactrum anthropi ATCC 49188]
gi|151560970|gb|ABS14468.1| ComL, hypothetical competence protein [Ochrobactrum anthropi ATCC
49188]
Length = 287
Score = 141 bits (354), Expect = 1e-31, Method: Composition-based stats.
Identities = 90/251 (35%), Positives = 135/251 (53%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
K AL + L G + V + + Y + + L +A + F
Sbjct: 11 KTALLTGAIAVLIPLAGCASKDDDIDLTKYVETIDPADKTYNEGLANLDAGRLDEAAKKF 70
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
R P+ ARKSL+M+AF Y G Y++A S+ + Y T YP S Y YY++G+S
Sbjct: 71 AAVDRQHPYTEWARKSLVMAAFTNYRKGNYEEAISMAKRYNTLYPTSPESAYAYYIIGLS 130
Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
Y + I DV DQ A++ + M +V+R+ +S Y AR + R+QLA KE+++GRYY
Sbjct: 131 YFRQIPDVTRDQAASRRAIAAMQEVVDRFPDSEYTDDARAKIRFARDQLAGKEMQVGRYY 190
Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
L+R EY+A+I RF+ V+ YS+ EEA+ARLVEAY AL L EA+ S++ + YP
Sbjct: 191 LERKEYLASIKRFRGVVEEYSNTRQVEEALARLVEAYYALGLTSEAQMAASVLGKNYPDS 250
Query: 261 YWARYVETLVK 271
W + L++
Sbjct: 251 QWYKDSYKLLQ 261
>gi|83858907|ref|ZP_00952429.1| competence lipoprotein ComL, putative [Oceanicaulis alexandrii
HTCC2633]
gi|83853730|gb|EAP91582.1| competence lipoprotein ComL, putative [Oceanicaulis alexandrii
HTCC2633]
Length = 277
Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 78/252 (30%), Positives = 135/252 (53%), Gaps = 4/252 (1%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ L + ++ + +Y +A ++ + + +A
Sbjct: 1 MKTVLRVALLGAVALSLTACAGRDREELAYVE----QPVETLYAEAFDKMQRRRYDEAAA 56
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
YF++ R PF+ AR+S+LM+A+ Y KY +A S + +I +P + + Y YYL+
Sbjct: 57 YFDEVERQHPFSEWARRSMLMAAYANYRQSKYDEAISDAQRFIALHPGNASAPYAYYLIA 116
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
+SY + I DV DQ T+ LQ + ++V RY ++PY + AR + + R+ LA KE+ +GR
Sbjct: 117 LSYYERIYDVGRDQSTTQQALQALEQVVRRYPDTPYAQDARLKIDMTRDHLAGKEMSVGR 176
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
+YL+ G ++AAI RFQ V+ +Y H EA+ RLVEAYV+L + +EAR++ +++ +P
Sbjct: 177 WYLRNGYHLAAINRFQNVIRDYETTSHTPEALHRLVEAYVSLGVDEEARQIAAVLGYNFP 236
Query: 259 QGYWARYVETLV 270
W L+
Sbjct: 237 GSEWYEDSYDLL 248
>gi|13471541|ref|NP_103107.1| hypothetical protein mll1543 [Mesorhizobium loti MAFF303099]
gi|18202649|sp|Q98KC1|Y1543_RHILO RecName: Full=UPF0169 lipoprotein Mll1543; Flags: Precursor
gi|14022283|dbj|BAB48893.1| mll1543 [Mesorhizobium loti MAFF303099]
Length = 289
Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 83/249 (33%), Positives = 130/249 (52%)
Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
L + + FL V +Y + + L +A + F+
Sbjct: 17 LLALSLVVPSLFLSACMSSEKDIDLSKYVDQTEPADVLYNQGLANLNAGRLDEASKKFDA 76
Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
R P++ ARKS++M AF Y G Y +A S + Y+ YP + + Y Y++G+SY
Sbjct: 77 VDRQHPYSEWARKSMVMGAFADYRKGSYDEAISSAKRYLALYPSTDDAPYAQYIIGLSYY 136
Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
+ I+DV DQ+ + LQ M +V R+ S YV A+ + +QLA KE++IGRYYL+
Sbjct: 137 RQIKDVTQDQKEARQTLQTMQDLVTRWPTSEYVDDAKEKIRFANDQLAGKEMQIGRYYLE 196
Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
R EY+AA+ RF+ V+ NYS+ H EEA+ARL E+Y A+ L EA+ +++ YP W
Sbjct: 197 RREYIAAVKRFRTVVENYSNTRHVEEALARLTESYYAMGLTSEAQTAAAVLGTNYPDSPW 256
Query: 263 ARYVETLVK 271
+ L++
Sbjct: 257 YKDSYKLLQ 265
>gi|92116844|ref|YP_576573.1| putative lipoprotein [Nitrobacter hamburgensis X14]
gi|91799738|gb|ABE62113.1| putative lipoprotein [Nitrobacter hamburgensis X14]
Length = 325
Score = 138 bits (346), Expect = 9e-31, Method: Composition-based stats.
Identities = 80/256 (31%), Positives = 127/256 (49%), Gaps = 4/256 (1%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTD---VRYQREVYEKAVLFLKEQ-NFSK 75
K L + I L G + D +L ++Y + + + Q +
Sbjct: 46 RKLRLVVGLVILGTTLSGCGTGALWDKFLAKDEQTFSDEPADKLYNEGLFLMNNQRDLKA 105
Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
A + F++ R+ P++ ARKSLLMSA+ Y AG Y Y+T +P S + Y Y
Sbjct: 106 ATKKFDEVDREHPYSEWARKSLLMSAYASYQAGDYDTCIGSASRYVTLHPGSPDAAYAQY 165
Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
L+ S I D+ DQ T+ + + ++ +Y S Y A+ + R+QLA KE+
Sbjct: 166 LIAASNYDQIPDISRDQARTEKAMASLEEVIRKYPTSEYAGEAKKKLQGARDQLAGKEMA 225
Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
IGRYY++R +Y AI RF+ V+ Y H EEA+ARL EAY+A+ ++ EA+ +++
Sbjct: 226 IGRYYMERRDYTGAINRFKTVVTRYQTTRHVEEALARLTEAYMAIGIVGEAQTAAAVLGH 285
Query: 256 RYPQGYWARYVETLVK 271
+P W + LVK
Sbjct: 286 NFPNSRWYKDAYNLVK 301
>gi|94497005|ref|ZP_01303579.1| DNA uptake lipoprotein [Sphingomonas sp. SKA58]
gi|94423681|gb|EAT08708.1| DNA uptake lipoprotein [Sphingomonas sp. SKA58]
Length = 266
Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats.
Identities = 74/247 (29%), Positives = 125/247 (50%), Gaps = 3/247 (1%)
Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
T IA L G ++ L DV +Y L + A F++
Sbjct: 17 TALVLIASPVLTGCSTSKNKADTLYVARDVST---LYNSGKDRLDRGQYKLAAALFDEVE 73
Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
R P++ AR++ LMSAF Y Y ++ S + +++ + +K+ Y YYL+ + Y +
Sbjct: 74 RQHPYSPWARRAQLMSAFSYYMNRDYAESISAAQRFLSIHTGNKDAPYAYYLIAICYYEQ 133
Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204
I DV DQ+ T+ L + ++ RY + Y AR V + + LA KE+E+GR+Y +RG
Sbjct: 134 IADVTRDQKITQQALDSLGELIRRYPQTRYAADARLKVDLVNDHLAGKEMEVGRFYQRRG 193
Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
+++AA RF+ V+ Y H EA+ RLVE+Y++L + EA++ +++ YP W
Sbjct: 194 QWLAATLRFRTVIDKYQTTTHTPEALERLVESYLSLGIPAEAQKAAAVLGRNYPGTKWYE 253
Query: 265 YVETLVK 271
L++
Sbjct: 254 RSYKLMQ 260
>gi|296532811|ref|ZP_06895488.1| lipoprotein [Roseomonas cervicalis ATCC 49957]
gi|296266872|gb|EFH12820.1| lipoprotein [Roseomonas cervicalis ATCC 49957]
Length = 281
Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats.
Identities = 73/255 (28%), Positives = 126/255 (49%), Gaps = 2/255 (0%)
Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDS--VTDVRYQREVYEKAVLFLKEQNFSK 75
+L + A + +D L + +Y + L+++ + +
Sbjct: 4 RLNRTLRLSLILAAPLLVGACSAWDGKDSSLRPRASVADQSPEALYAAGIEALRQERYQQ 63
Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
A E F+ + P++ A + LMSA+ +Y +Y +A + +I +P +++ Y YY
Sbjct: 64 AVEMFDAVESNHPYSTWATSAKLMSAYSEYMRNRYTEAIGALDRFIQLHPAHRDIAYAYY 123
Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
L + Y + I D DQR T+ L + +V R+ +S Y + AR + + R+ LA +E+
Sbjct: 124 LRALCYYEQIVDAERDQRGTETALAQLQDVVNRFPDSAYARDARLKMDLARDHLAGREMI 183
Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
+GR+Y RG Y AAI RF+ V+ +Y H EA+ RL E Y+AL L +EAR+ S++
Sbjct: 184 VGRFYQARGLYTAAIGRFKRVVEDYQTTNHVPEALHRLTEVYLALGLTEEARQTASVLGH 243
Query: 256 RYPQGYWARYVETLV 270
YP W + L+
Sbjct: 244 NYPGSPWYQDSYALL 258
>gi|114570618|ref|YP_757298.1| DNA uptake lipoprotein-like protein [Maricaulis maris MCS10]
gi|114341080|gb|ABI66360.1| DNA uptake lipoprotein-like protein [Maricaulis maris MCS10]
Length = 276
Score = 136 bits (341), Expect = 3e-30, Method: Composition-based stats.
Identities = 80/252 (31%), Positives = 133/252 (52%), Gaps = 4/252 (1%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + + + L V R +Y A L Q + A
Sbjct: 1 MTFMSRIVAPLVLSALLASCASGPDNSVAYVE----RPAETIYATAFESLDRQQYPLAAA 56
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
F++ R P++ AR+++LM+A+ Y + Y +A S + +I+ +P ++N Y YYL+
Sbjct: 57 RFDEVERQHPYSEWARRAMLMAAYANYESNNYDEAISDAQRFISLHPGNRNAAYAYYLIA 116
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
+S+ + I DV DQ AT+ L + ++V R+ +S Y AR + + R+ LA KE+ +GR
Sbjct: 117 ISHFEQIMDVGRDQAATQQALLSLEQVVRRFPDSRYATDARLKIDMTRDHLAGKEMSVGR 176
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
+YL+RG ++AAI RFQ VL Y + H EA+ RLVE+YV+L + +EAR+V S++ +P
Sbjct: 177 WYLRRGYHLAAINRFQNVLREYGNTSHVPEALHRLVESYVSLGIDEEARQVASVLGYNFP 236
Query: 259 QGYWARYVETLV 270
W L+
Sbjct: 237 GSDWYETSYDLL 248
>gi|116253037|ref|YP_768875.1| competence lipoprotein ComL protein [Rhizobium leguminosarum bv.
viciae 3841]
gi|115257685|emb|CAK08783.1| putative competence lipoprotein ComL protein [Rhizobium
leguminosarum bv. viciae 3841]
Length = 289
Score = 136 bits (341), Expect = 3e-30, Method: Composition-based stats.
Identities = 90/257 (35%), Positives = 148/257 (57%), Gaps = 5/257 (1%)
Query: 19 LYKFALTIFFSIAVC----FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFS 74
+ K A +F S+ V + G + + +Y + + +K N +
Sbjct: 9 MMKTARALFASLLVLSAGALISGCQSDPD-IDITKLGLETDPPDVLYTQGLANMKAGNMA 67
Query: 75 KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
+A F+ R+ PF+ ARK+L+MS FV+Y G+ A + G Y++QYP+S++ YV
Sbjct: 68 EAARKFDAIDRENPFSEWARKALVMSTFVKYRQGRLDDALASGNRYMSQYPKSQDAAYVQ 127
Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
YL+G++Y++ I DV DQRA+ ++ M +++ Y NS YV A+ + R+QLA KE+
Sbjct: 128 YLIGLTYSKQIVDVTQDQRASAKTIEAMQAVIDNYPNSEYVDDAQAKIRFSRDQLAGKEM 187
Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
+IGRYY++R EY+AAI RF++V+ Y + EEA+ARLVEAY A+ ++DEA+ +++
Sbjct: 188 QIGRYYMERKEYLAAISRFRIVVEKYPNTNQIEEALARLVEAYYAMGIVDEAQTAAAVLG 247
Query: 255 ERYPQGYWARYVETLVK 271
YP W L++
Sbjct: 248 HNYPDSQWYADSYKLLQ 264
>gi|319782856|ref|YP_004142332.1| outer membrane assembly lipoprotein YfiO [Mesorhizobium ciceri
biovar biserrulae WSM1271]
gi|317168744|gb|ADV12282.1| outer membrane assembly lipoprotein YfiO [Mesorhizobium ciceri
biovar biserrulae WSM1271]
Length = 289
Score = 136 bits (340), Expect = 5e-30, Method: Composition-based stats.
Identities = 82/249 (32%), Positives = 129/249 (51%)
Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
L + + FL V +Y + + L +A F+
Sbjct: 17 FLALSVVVPSLFLSACMSSEKDIDLSTYVDQTEPADVLYNQGLANLNAGRLQEASRKFDA 76
Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
R P++ ARKS++M AF Y G Y +A + Y+T YP + + Y Y++G+SY
Sbjct: 77 VDRQHPYSEWARKSMVMGAFADYRQGNYDEAIGSAKRYLTLYPSTDDAAYAQYIIGLSYY 136
Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
+ I+DV DQ+ + +Q M +V R+ S YV A+ + +QLA KE++IGRYYL+
Sbjct: 137 RQIKDVTQDQKEARQTVQTMQDLVTRWPTSEYVDDAKEKIRFANDQLAGKEMQIGRYYLE 196
Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
R EY+AA+ RF+ V+ NYS+ H EEA+ARL E+Y A+ L EA+ +++ YP W
Sbjct: 197 RREYIAAVKRFRTVVENYSNTRHVEEALARLTESYYAMGLTSEAQTAAAVLGTNYPDSSW 256
Query: 263 ARYVETLVK 271
+ L++
Sbjct: 257 YKDSYKLLQ 265
>gi|114798667|ref|YP_759117.1| putative competence lipoprotein ComL [Hyphomonas neptunium ATCC
15444]
gi|114738841|gb|ABI76966.1| putative competence lipoprotein ComL [Hyphomonas neptunium ATCC
15444]
Length = 277
Score = 135 bits (339), Expect = 5e-30, Method: Composition-based stats.
Identities = 67/247 (27%), Positives = 124/247 (50%), Gaps = 3/247 (1%)
Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
L + + + R ++Y + L +++++A +F +
Sbjct: 7 LPLVILAGALLITACSSTRRN---PELAYVERPVEQLYNQGTDRLDRRDYTRAKLFFEEV 63
Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
R P++ AR++++MSA+ Y + Y + + E Y++ +P +Y YYL+ +++
Sbjct: 64 ERQHPYSEWARRAMVMSAYASYRSRDYTTSITGAERYLSLHPGGSEAEYAYYLIALNHFD 123
Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
I DV DQ T+ + ++ RY S Y + AR + + +QLA KE+ +GR+YL+
Sbjct: 124 QITDVGRDQATTESARNALLEVIRRYPESEYARDARVKLDMVNDQLAGKEMTVGRWYLRS 183
Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
+ +AA+ RF+ V+ +Y H+EEA+ RLVEAY+ L L D+A + + YP W
Sbjct: 184 NQTLAAVNRFRKVVTDYQTTSHSEEALHRLVEAYLTLGLRDQAVVAGATLGHNYPGSDWY 243
Query: 264 RYVETLV 270
+ L+
Sbjct: 244 QMSYRLL 250
>gi|209550164|ref|YP_002282081.1| outer membrane assembly lipoprotein YfiO [Rhizobium leguminosarum
bv. trifolii WSM2304]
gi|209535920|gb|ACI55855.1| outer membrane assembly lipoprotein YfiO [Rhizobium leguminosarum
bv. trifolii WSM2304]
Length = 281
Score = 135 bits (338), Expect = 7e-30, Method: Composition-based stats.
Identities = 90/257 (35%), Positives = 148/257 (57%), Gaps = 5/257 (1%)
Query: 19 LYKFALTIFFSIAVCF----LVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFS 74
+ K A +F S+ V + G + + +Y + + +K N +
Sbjct: 1 MMKTARALFASLLVLSAGASISGCQSDPD-IDITKLGLETDPPDVLYTQGLANMKAGNMA 59
Query: 75 KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
+A F+ R+ PF+ ARK+L+MS FV+Y G+ A + G Y++QYP+S++ YV
Sbjct: 60 EAARKFDAIDRENPFSEWARKALVMSTFVKYRQGRLDDALTSGNRYMSQYPKSQDAAYVQ 119
Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
YL+G++Y++ I DV DQRA+ ++ M +++ Y NS YV A+ + R+QLA KE+
Sbjct: 120 YLIGLTYSKQIVDVTQDQRASAKTIEAMQAVIDNYPNSEYVDDAQAKIRFARDQLAGKEM 179
Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
+IGRYY++R EY+AAI RF++V+ Y + EEA+ARLVEAY A+ ++DEA+ +++
Sbjct: 180 QIGRYYMERKEYLAAISRFRIVVEKYPNTNQIEEALARLVEAYYAMGIVDEAQTAAAVLG 239
Query: 255 ERYPQGYWARYVETLVK 271
YP W L++
Sbjct: 240 HNYPDSQWYADSYKLLQ 256
>gi|241205546|ref|YP_002976642.1| outer membrane assembly lipoprotein YfiO [Rhizobium leguminosarum
bv. trifolii WSM1325]
gi|240859436|gb|ACS57103.1| outer membrane assembly lipoprotein YfiO [Rhizobium leguminosarum
bv. trifolii WSM1325]
Length = 281
Score = 135 bits (338), Expect = 8e-30, Method: Composition-based stats.
Identities = 91/257 (35%), Positives = 148/257 (57%), Gaps = 5/257 (1%)
Query: 19 LYKFALTIFFSIAVCF----LVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFS 74
+ K A +F S+ V + G + + +Y + + +K N +
Sbjct: 1 MMKTARALFASLLVLSAGASISGCQSDPD-IDITKLGLETDPPDVLYTQGLANMKAGNMA 59
Query: 75 KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
+A F+ R+ PF+ ARK+L+MS FV+Y G+ A + G Y++QYP+S++ YV
Sbjct: 60 EAARKFDAIDRENPFSEWARKALVMSTFVKYRQGRLDDALASGNRYMSQYPKSQDAAYVQ 119
Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
YL+G++Y++ I DV DQRA+ ++ M +++ Y NS YV A+ + R+QLA KE+
Sbjct: 120 YLIGLTYSKQIVDVTQDQRASAKTIEAMQAVIDNYPNSEYVDDAQAKIRFSRDQLAGKEM 179
Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
+IGRYYL+R EY+AAI RF++V+ Y + EEA+ARLVEAY A+ ++DEA+ +++
Sbjct: 180 QIGRYYLERKEYLAAISRFRIVVEKYPNTNQIEEALARLVEAYYAMGIVDEAQTAAAVLG 239
Query: 255 ERYPQGYWARYVETLVK 271
YP W L++
Sbjct: 240 HNYPDSQWYADSYKLLQ 256
>gi|190892573|ref|YP_001979115.1| competence lipoprotein protein [Rhizobium etli CIAT 652]
gi|190697852|gb|ACE91937.1| competence lipoprotein protein [Rhizobium etli CIAT 652]
gi|327194613|gb|EGE61463.1| competence lipoprotein protein [Rhizobium etli CNPAF512]
Length = 289
Score = 135 bits (338), Expect = 8e-30, Method: Composition-based stats.
Identities = 93/257 (36%), Positives = 146/257 (56%), Gaps = 5/257 (1%)
Query: 19 LYKFALTIFFSIAVCF----LVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFS 74
+ K A +F S+ V + G + + +Y + + +K N +
Sbjct: 9 MMKTARALFASLLVLSAGASISGCQSDPD-IDITKLGLETDPPDVLYTQGLANMKAGNMA 67
Query: 75 KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
+A F+ R+ PF+ ARK+L+MS FV+Y GK A + G Y+ QYP+S++ YV
Sbjct: 68 EAARKFDAIDRENPFSEWARKALVMSTFVKYRQGKLDDALASGNRYMAQYPKSQDAAYVQ 127
Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
YLVG++Y++ I DV DQRA ++ M +V+ Y NS YV A+ + R+QLA KE+
Sbjct: 128 YLVGLTYSKQIVDVTQDQRAAAKTIEAMQAVVDNYPNSEYVDDAQAKIRFARDQLAGKEM 187
Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
+IGRYY++R EY+AAI RF++V+ Y + EEA+ARLVEAY A+ ++DEA+ +++
Sbjct: 188 QIGRYYMERKEYLAAISRFRIVVEKYPNTNQIEEALARLVEAYYAMGIVDEAQTAAAVLG 247
Query: 255 ERYPQGYWARYVETLVK 271
YP W L++
Sbjct: 248 HNYPDSQWYADSYKLLQ 264
>gi|86358441|ref|YP_470333.1| hypothetical protein RHE_CH02838 [Rhizobium etli CFN 42]
gi|86282543|gb|ABC91606.1| hypothetical conserved protein [Rhizobium etli CFN 42]
Length = 289
Score = 134 bits (337), Expect = 9e-30, Method: Composition-based stats.
Identities = 90/257 (35%), Positives = 148/257 (57%), Gaps = 5/257 (1%)
Query: 19 LYKFALTIFFSIAVCF----LVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFS 74
+ K A +F S+ V + G + + +Y + + +K N +
Sbjct: 9 MMKTARALFASLLVLSAGASISGCQSDPD-IDITKLGLETDPPDVLYTQGLANMKAGNMA 67
Query: 75 KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
+A F+ R+ PF+ ARK+L+MS FV+Y GK A + G Y++QYP+S++ YV
Sbjct: 68 EAARKFDAIDRENPFSEWARKALVMSTFVKYRQGKLDDALASGNRYMSQYPKSQDAAYVQ 127
Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
YL+G++Y++ I DV DQRA+ ++ M +++ Y NS YV A+ + R+QLA KE+
Sbjct: 128 YLIGLTYSKQIVDVTQDQRASAKTIEAMQAVIDNYPNSEYVDDAQAKIRFARDQLAGKEM 187
Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
++GRYY++R EY+AAI RF++V+ Y + EEA+ARLVEAY A+ ++DEA+ +++
Sbjct: 188 QVGRYYMERKEYLAAISRFRIVVEKYPNTNQIEEALARLVEAYYAMGIVDEAQTAAAVLG 247
Query: 255 ERYPQGYWARYVETLVK 271
YP W L++
Sbjct: 248 HNYPDSQWYADSYKLLQ 264
>gi|312114836|ref|YP_004012432.1| outer membrane assembly lipoprotein YfiO [Rhodomicrobium vannielii
ATCC 17100]
gi|311219965|gb|ADP71333.1| outer membrane assembly lipoprotein YfiO [Rhodomicrobium vannielii
ATCC 17100]
Length = 287
Score = 134 bits (335), Expect = 1e-29, Method: Composition-based stats.
Identities = 71/248 (28%), Positives = 127/248 (51%), Gaps = 1/248 (0%)
Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVT-DVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
I + L G S +S D R ++Y++A L + +KA E F +
Sbjct: 13 VILATTLSSSLGGCGSMGSMFSSSESTQLDQRPPDQIYKEADDLLGQGKNNKAAELFERI 72
Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
+ +P++ A+KS LM+A+ AGK +A + +++ +P SK ++ SY +
Sbjct: 73 DQLYPYSEEAKKSTLMAAYAYQKAGKGPEAVAAARRFLSLHPGSKEAALAQEIIASSYFE 132
Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
I DQ TK + + ++ RY +S Y + A+ + + R+ LAA E+ +GRY+ K+
Sbjct: 133 RISGPTRDQGETKKAIAELETLISRYPDSRYSEDAKRRIKLARDTLAASEMNVGRYWQKK 192
Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
G Y+ A+ RF+ V+ Y H EEA+ RL E Y+AL +++EA+ +++ +P W
Sbjct: 193 GNYLGAVNRFKTVVTEYQQTTHVEEALMRLTECYMALGIVNEAQTAAAVLGHNFPDSPWY 252
Query: 264 RYVETLVK 271
+ L++
Sbjct: 253 KDAYALLQ 260
>gi|304321637|ref|YP_003855280.1| competence lipoprotein ComL [Parvularcula bermudensis HTCC2503]
gi|303300539|gb|ADM10138.1| competence lipoprotein ComL, putative [Parvularcula bermudensis
HTCC2503]
Length = 308
Score = 134 bits (335), Expect = 2e-29, Method: Composition-based stats.
Identities = 73/252 (28%), Positives = 122/252 (48%), Gaps = 1/252 (0%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + L G +Y KA L+ + + +A
Sbjct: 1 MSGKIALTALGSVLLALGGCSNFG-NAPDDRLAYVEEPVEILYRKAADALERRRYEEAVL 59
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
F + R P++ AR+++LM A+ +Y Y + + + ++ +P +K+ Y YYL
Sbjct: 60 LFEEVERQHPYSSWARRAMLMVAYSEYLQNNYDASIASIDRFLAVHPGNKDAAYAYYLRA 119
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
++Y + IRDV DQ T L + ++ RY +S Y + A + + R+ LA KE++IGR
Sbjct: 120 INYYERIRDVGRDQDITAQALSALEDVIRRYPDSDYARDASLKLDLTRDHLAGKEMDIGR 179
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
+YLKR E++AAI RF VL Y H EA+ RLVEAY+ + + EA+ +++ YP
Sbjct: 180 WYLKRNEHIAAINRFNEVLTTYETTSHVPEALHRLVEAYLEMGVAFEAQRHAAILAHNYP 239
Query: 259 QGYWARYVETLV 270
W R ++
Sbjct: 240 DSNWYRDSYRML 251
>gi|254781174|ref|YP_003065587.1| outer membrane assembly lipoprotein YfiO [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040851|gb|ACT57647.1| outer membrane assembly lipoprotein YfiO [Candidatus Liberibacter
asiaticus str. psy62]
Length = 271
Score = 134 bits (335), Expect = 2e-29, Method: Composition-based stats.
Identities = 271/271 (100%), Positives = 271/271 (100%)
Query: 1 MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV 60
MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV
Sbjct: 1 MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV 60
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY
Sbjct: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF
Sbjct: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL
Sbjct: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
Query: 241 ALMDEAREVVSLIQERYPQGYWARYVETLVK 271
ALMDEAREVVSLIQERYPQGYWARYVETLVK
Sbjct: 241 ALMDEAREVVSLIQERYPQGYWARYVETLVK 271
>gi|90424787|ref|YP_533157.1| putative lipoprotein [Rhodopseudomonas palustris BisB18]
gi|90106801|gb|ABD88838.1| putative lipoprotein [Rhodopseudomonas palustris BisB18]
Length = 289
Score = 134 bits (335), Expect = 2e-29, Method: Composition-based stats.
Identities = 74/253 (29%), Positives = 124/253 (49%), Gaps = 3/253 (1%)
Query: 22 FALTIFFSIAVCFLVGWERQS--SRDVYLDSVTDVRYQREVYEKAVLFLKEQ-NFSKAYE 78
+ L G + + + D ++Y + + + + + A +
Sbjct: 13 LRFAASLIVLTLPLSGCGTGALWDKFMTKDETYTDEPADKLYNEGLYLMNKGKDPKAASK 72
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
F + R P++ ARKSLLMSA+ Y AG Y Y+T +P S + Y YL+
Sbjct: 73 KFEEVDRQHPYSDWARKSLLMSAYAFYEAGDYDSCIGSATRYVTMHPGSPDAAYAQYLIA 132
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
S+ I D+ DQ T+ + + ++ +Y S Y A+ + R+QLA KE+ +GR
Sbjct: 133 ASHYDQIPDISRDQGRTEKAIAALEEVIRKYPTSEYATSAKKKLEGARDQLAGKEMNVGR 192
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
YY+++ +Y AAI RF+ V+ Y H EEA+ARL EAY+A+ ++ EA+ +++ +P
Sbjct: 193 YYMEKRDYTAAINRFKTVVTRYQTTRHVEEALARLTEAYMAIGIVGEAQTAAAVLGHNFP 252
Query: 259 QGYWARYVETLVK 271
W + LVK
Sbjct: 253 DSKWYQDAYNLVK 265
>gi|148554377|ref|YP_001261959.1| DNA uptake lipoprotein-like protein [Sphingomonas wittichii RW1]
gi|148499567|gb|ABQ67821.1| DNA uptake lipoprotein-like protein [Sphingomonas wittichii RW1]
Length = 261
Score = 134 bits (335), Expect = 2e-29, Method: Composition-based stats.
Identities = 76/254 (29%), Positives = 133/254 (52%)
Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
L K + I IA LV ++ D+ R +Y A L + A
Sbjct: 1 MLRKVSRPIALMIAAATLVPLAGCATSKNKGDTKYVARDVDTLYNAAKERLDRHQYKLAA 60
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
F++ R P++ AR++ LMSAF Y A +Y ++ + + +I+ +P +++ Y YL+
Sbjct: 61 ALFDEVERQHPYSVWARRAQLMSAFSYYLARQYTESIASAQRFISIHPGNRDAPYALYLI 120
Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
+ Y + I+DV DQ+ T+ L ++ ++ RY +S Y AR V + + LA KE+EIG
Sbjct: 121 AIDYYEQIQDVTRDQKLTQNALDALNELIRRYPDSRYAADARVKVDLVNDHLAGKEMEIG 180
Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
R+Y +RG+++A++ RF+ V+ Y H EA+ RL E+Y+ L + EA +++ Y
Sbjct: 181 RFYQRRGDWLASVVRFRTVVDKYDTTSHTPEALMRLTESYLELGVPQEAERAAAVLGANY 240
Query: 258 PQGYWARYVETLVK 271
P W ++ L++
Sbjct: 241 PGSKWYQHSYELLR 254
>gi|90418186|ref|ZP_01226098.1| putative competence lipoprotein comL [Aurantimonas manganoxydans
SI85-9A1]
gi|90337858|gb|EAS51509.1| putative competence lipoprotein comL [Aurantimonas manganoxydans
SI85-9A1]
Length = 293
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 87/252 (34%), Positives = 134/252 (53%), Gaps = 1/252 (0%)
Query: 21 KFALTIFFSIAVCFLVGW-ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
K + +A L G +S L + +Y + + L+ +A +
Sbjct: 17 KLTGALALGLASAGLSGCMSSDTSDVEALALAAETDPPDVLYNQGLANLEGGRLGEATKK 76
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
F R P++ ARK+L+MSAF Y G Y A + + Y++ YP S+ Y Y++G+
Sbjct: 77 FEAIDRQHPYSEWARKALVMSAFASYRGGDYDTAINSSKRYLSLYPGSEEAAYAQYIMGL 136
Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
+Y + I DV DQ+ M + E+Y +S Y AR + + R+QLA KE+++GRY
Sbjct: 137 AYYRQIPDVTRDQKEAARAAAAMREVFEKYPDSEYADDARAKLRIARDQLAGKEMQVGRY 196
Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
YL+R EYVAAI RF+ V+ YSD+ H EEA+ARL EAY A+ L EA+ S++ + +P
Sbjct: 197 YLERREYVAAINRFKNVVDVYSDSRHVEEALARLTEAYYAMGLTREAQAAASVLGQNFPD 256
Query: 260 GYWARYVETLVK 271
W R L++
Sbjct: 257 SQWYRDSYQLLQ 268
>gi|218659461|ref|ZP_03515391.1| hypothetical protein RetlI_07243 [Rhizobium etli IE4771]
Length = 294
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 93/257 (36%), Positives = 148/257 (57%), Gaps = 5/257 (1%)
Query: 19 LYKFALTIFFSIAVCF----LVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFS 74
+ K A +F S+ V + G + + +Y + + +K N +
Sbjct: 14 MMKTARALFASLLVLSAGASISGCQSDPD-IDITKLGLETDPPDVLYTQGLANMKAGNMA 72
Query: 75 KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
+A F+ R+ PF+ ARK+L+MS FV+Y GK+ A + G Y+ QYP+S++ YV
Sbjct: 73 EAARKFDAIDRENPFSEWARKALVMSTFVKYRQGKFDDALASGNRYMAQYPKSQDAAYVQ 132
Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
YLVG++Y++ I DV DQRA+ ++ M +V+ Y NS YV A+ + R+QLA KE+
Sbjct: 133 YLVGLTYSKQIVDVTQDQRASAKTIEAMQAVVDNYPNSEYVDDAQAKIRYARDQLAGKEM 192
Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
+IGRYY++R EY+AAI RF++V+ Y + EEA+ARLVEAY A+ ++DEA+ +++
Sbjct: 193 QIGRYYMERKEYLAAISRFRIVVEKYPNTNQIEEALARLVEAYYAMGIVDEAQTAAAVLG 252
Query: 255 ERYPQGYWARYVETLVK 271
YP W L++
Sbjct: 253 HNYPDSQWYADSYKLLQ 269
>gi|163760778|ref|ZP_02167858.1| hypothetical protein HPDFL43_13018 [Hoeflea phototrophica DFL-43]
gi|162282100|gb|EDQ32391.1| hypothetical protein HPDFL43_13018 [Hoeflea phototrophica DFL-43]
Length = 288
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 74/249 (29%), Positives = 131/249 (52%), Gaps = 1/249 (0%)
Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
+ + G + D+ + T +Y + + ++ ++A F
Sbjct: 17 LFIAGLTGVASLVSGCQSDPDIDITAYAQTIE-PADVLYNQGLANIQAGQLTEASRKFQA 75
Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
+ P++ ARK+++MSAF Y G+Y +A + Y++ YP ++ Y Y+VG+SY
Sbjct: 76 VDKQHPYSEYARKAMVMSAFTNYRQGQYSEAINTASRYLSLYPNDEDAAYAQYIVGLSYY 135
Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
+ I +V DQR + + + ++ER+ S YV+ ++ + R+QLA KE+++GRYYL+
Sbjct: 136 RQIPEVTRDQRTSARAIAAFTEVIERFPESEYVEDSQAKLRYARDQLAGKEMQVGRYYLE 195
Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
R E+VAA RF+LV+ Y + EEA+ARLVE Y A+ L EA+ +++ +P W
Sbjct: 196 RKEFVAAANRFRLVVERYPNTRQIEEALARLVETYYAMGLESEAQTAAAVLGHNFPDSQW 255
Query: 263 ARYVETLVK 271
L++
Sbjct: 256 YADSFNLLR 264
>gi|222086434|ref|YP_002544968.1| hypothetical protein Arad_2982 [Agrobacterium radiobacter K84]
gi|221723882|gb|ACM27038.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
Length = 289
Score = 133 bits (333), Expect = 2e-29, Method: Composition-based stats.
Identities = 92/256 (35%), Positives = 142/256 (55%), Gaps = 3/256 (1%)
Query: 18 QLYKFALTIFFSIAVC--FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
++ AL + +A + G + +Y + + +K N ++
Sbjct: 10 KITARALLVSLLLAGTGAVVTGCNTD-KDIDISKLGVETDPPETLYNQGLANIKAGNMAE 68
Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
A F+ ++ PF+ ARK+L+MS FV+Y G+Y A G Y+ QYP S++ DYV Y
Sbjct: 69 AGRKFDAINQQQPFSEWARKALVMSTFVKYRTGRYDDAVQSGNSYLKQYPGSEDADYVQY 128
Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
LVG SYA+ I V DQRA + ++ MS++V Y +S YV A+ + R+QLA KE++
Sbjct: 129 LVGSSYAKQIVSVTQDQRAAQQTIEAMSKVVTNYPSSQYVSDAQAKIRFARDQLAGKEMQ 188
Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
IGRYYL+R +Y+AAI RF++V+ Y EEA+ARLVEAY A+ ++ EA+ +++
Sbjct: 189 IGRYYLERKDYLAAISRFRIVIEQYPTTNQIEEALARLVEAYYAMGIVQEAQTAAAVLGH 248
Query: 256 RYPQGYWARYVETLVK 271
YP W L+K
Sbjct: 249 NYPDSRWYADSFKLLK 264
>gi|295688858|ref|YP_003592551.1| outer membrane assembly lipoprotein YfiO [Caulobacter segnis ATCC
21756]
gi|295430761|gb|ADG09933.1| outer membrane assembly lipoprotein YfiO [Caulobacter segnis ATCC
21756]
Length = 315
Score = 133 bits (333), Expect = 3e-29, Method: Composition-based stats.
Identities = 80/234 (34%), Positives = 122/234 (52%), Gaps = 3/234 (1%)
Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
G +S + R +Y L N+++A +YF + R P++ +R+S
Sbjct: 33 GCAGKSKKPSLAYE---ERPVELLYSTGADRLDRGNWNEAVDYFREVERQHPYSEWSRRS 89
Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
+LM+ + Y Y A + +I+ YP + + Y YYL + Y + I DV DQ AT+
Sbjct: 90 ILMTGYAHYMGNNYNDAIGDADRFISLYPGNPSASYAYYLKAVCYFEQIVDVNRDQAATE 149
Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
L + +V+RY NS Y AR + + +QLA KE+ IGRYYLK G+ +AAI RF+ V
Sbjct: 150 QALAALRDVVQRYPNSEYATDARLKIDMVNDQLAGKEMAIGRYYLKNGQTLAAIGRFKAV 209
Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
L + H EA+ RLVEAY+ L LMDEA+ +++ +P W L+
Sbjct: 210 LERHQTTSHTPEALYRLVEAYLTLGLMDEAKRNGAVLGYNFPGDRWYADAYRLL 263
>gi|167647062|ref|YP_001684725.1| outer membrane assembly lipoprotein YfiO [Caulobacter sp. K31]
gi|167349492|gb|ABZ72227.1| outer membrane assembly lipoprotein YfiO [Caulobacter sp. K31]
Length = 306
Score = 133 bits (333), Expect = 3e-29, Method: Composition-based stats.
Identities = 76/242 (31%), Positives = 126/242 (52%), Gaps = 3/242 (1%)
Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
+ + +S + R +Y L ++++A +YF + R P
Sbjct: 17 VLVALSISACAGKSKKPTLAYE---ERPVELLYSTGANRLDRGSWNEAVDYFREVERQHP 73
Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
++ +R+S+LM+ + Y +Y +A S + +I YP + + Y YYL + Y + I DV
Sbjct: 74 YSEWSRRSILMTGYAHYMGNQYNEAISDSDRFIGLYPGNPSASYAYYLKAVCYFEQIVDV 133
Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
DQ AT+ L + +V+RY NS Y + AR + + +QLA KE+ IGRYYLK G+ +A
Sbjct: 134 NRDQAATEQALAALRDVVQRYPNSEYAQDARLKIDMVNDQLAGKEMTIGRYYLKNGQTLA 193
Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
AI RF+ V+ + H EA+ RLVE+Y+ L L+DEA+ +++ +P W
Sbjct: 194 AIGRFRTVIDRHQTTSHTPEALYRLVESYMTLGLLDEAKRNGAVLGYNFPGDPWYAEAYK 253
Query: 269 LV 270
L+
Sbjct: 254 LL 255
>gi|158426191|ref|YP_001527483.1| putative lipoprotein precursor [Azorhizobium caulinodans ORS 571]
gi|158333080|dbj|BAF90565.1| putative lipoprotein precursor [Azorhizobium caulinodans ORS 571]
Length = 284
Score = 133 bits (333), Expect = 3e-29, Method: Composition-based stats.
Identities = 81/247 (32%), Positives = 128/247 (51%), Gaps = 6/247 (2%)
Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
+ + L G D + ++Y + + L + + A + F
Sbjct: 20 LLGVVLVSATLAGCANDK------DVMAPDEPAEKIYNEGLTLLNKGDLDGAAKRFEDID 73
Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
+ P++ ARK+LLM +V Y AGKY A S G+ Y+ +P S++ YV YLV S
Sbjct: 74 KTHPYSEWARKALLMDTYVYYEAGKYDDAISAGKRYLALHPGSQDAPYVSYLVASSLYDS 133
Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204
I D+ DQR T+ L + ++ +Y N+ Y GA+ V V R+QLA KE+ IGRYYL++
Sbjct: 134 IPDISRDQRRTRQALDALDDVIRKYPNTEYAAGAKRKVEVARDQLAGKEMLIGRYYLEQR 193
Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
Y AI RF++V+ Y EEA+ R+ EAY+AL +++EA+ +++ YP W +
Sbjct: 194 NYTGAINRFKVVITQYQTTRQTEEALFRITEAYMALGIVNEAQTAAAVLGYNYPDSQWYK 253
Query: 265 YVETLVK 271
LV+
Sbjct: 254 DAFKLVQ 260
>gi|182677692|ref|YP_001831838.1| DNA uptake lipoprotein-like protein [Beijerinckia indica subsp.
indica ATCC 9039]
gi|182633575|gb|ACB94349.1| DNA uptake lipoprotein-like protein [Beijerinckia indica subsp.
indica ATCC 9039]
Length = 391
Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats.
Identities = 77/259 (29%), Positives = 127/259 (49%), Gaps = 14/259 (5%)
Query: 27 FFSIAVCFLVGWERQS--------------SRDVYLDSVTDVRYQREVYEKAVLFLKEQN 72
F L + Y V ++Y + ++ L++++
Sbjct: 22 FLLSVSLPLAACSSMGDFDASKSLNPTNWFKGEKYEAKVIPDVPADDIYNQGLVRLQKKD 81
Query: 73 FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132
+ A + F + +P++ +K LLMSA+ QY G Y A + + Y T YP + + Y
Sbjct: 82 YEAAGKKFADLEKQYPYSQWQKKGLLMSAYSQYQNGSYDDAIASAQRYYTLYPNAPDTPY 141
Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
YYL MS I DV DQ + +I E++ S Y + A++ + V R+QLA K
Sbjct: 142 AYYLAAMSNYNQIPDVSRDQERAQKAAVLFQQIAEKFPKSEYGEDAKYKLQVCRDQLAGK 201
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
E+ +GRYYL Y+AA+ RF+ VLA Y H+EEA+ RL EAY+AL +++EA+ ++
Sbjct: 202 EMFVGRYYLNNHNYIAAVNRFREVLAKYQTTRHSEEALMRLTEAYLALGIVNEAQTAAAV 261
Query: 253 IQERYPQGYWARYVETLVK 271
+ +P W + L++
Sbjct: 262 LGHNFPDSQWYKDSYALLQ 280
>gi|15965919|ref|NP_386272.1| hypothetical protein SMc01876 [Sinorhizobium meliloti 1021]
gi|307308229|ref|ZP_07587938.1| outer membrane assembly lipoprotein YfiO [Sinorhizobium meliloti
BL225C]
gi|307319696|ref|ZP_07599121.1| outer membrane assembly lipoprotein YfiO [Sinorhizobium meliloti
AK83]
gi|15075188|emb|CAC46745.1| Hypothetical transmembrane protein [Sinorhizobium meliloti 1021]
gi|306894627|gb|EFN25388.1| outer membrane assembly lipoprotein YfiO [Sinorhizobium meliloti
AK83]
gi|306901227|gb|EFN31833.1| outer membrane assembly lipoprotein YfiO [Sinorhizobium meliloti
BL225C]
Length = 288
Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats.
Identities = 77/240 (32%), Positives = 125/240 (52%), Gaps = 1/240 (0%)
Query: 32 VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91
+ + + +Y + + L ++A F + PF+
Sbjct: 26 SSLITAC-QNDPDIDITKLTAETDPPDVLYNQGLANLNAGKTTEAARKFEAIDKQHPFSE 84
Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151
ARK+L+M+AFV Y G+YQ A + Y+ YP+S++ Y Y+ G++Y + I V D
Sbjct: 85 YARKALVMNAFVAYRNGQYQDAINSTNRYLNLYPQSEDAAYAQYIQGLAYTKQIPSVTQD 144
Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
QR ++ M +V++Y +S YV A+ + R+QLA KE+++GRYYL+R EY+AAI
Sbjct: 145 QRPAAKAIEAMQVVVDKYPDSEYVDDAQAKIRFARDQLAGKEMQVGRYYLERKEYLAAIS 204
Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
RF+ V+ Y EEA+ARLVEAY A+ + EA+ +++ YP W L++
Sbjct: 205 RFRTVVERYPTTNQVEEALARLVEAYYAMGVTGEAQTAAAVLGHNYPDSQWYADSYKLLQ 264
>gi|221235000|ref|YP_002517436.1| ComL family lipoprotein [Caulobacter crescentus NA1000]
gi|220964172|gb|ACL95528.1| lipoprotein, ComL family [Caulobacter crescentus NA1000]
Length = 309
Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats.
Identities = 72/234 (30%), Positives = 124/234 (52%), Gaps = 3/234 (1%)
Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
G ++ + + R +Y L N+++A +YF + R P++ +R+S
Sbjct: 28 GCAGKAKKPTLVYE---ERPVELLYSTGADRLDRGNWNEAVDYFREVERQHPYSEWSRRS 84
Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
+LM+ + Y +Y +A + +I+ YP + + Y +YL + Y + I DV DQ AT+
Sbjct: 85 ILMTGYAHYMGNQYAEAIGDADRFISLYPGNPSAQYAFYLKAICYFEQIVDVNRDQAATE 144
Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
L + +V+RY N+ Y AR + + +QLA KE+ IGR+YLK G+ +AAI RF+ V
Sbjct: 145 QALAALRDVVQRYPNTEYATDARLKIDMVNDQLAGKEMAIGRWYLKNGQTLAAIGRFKAV 204
Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
+ + H EA+ RLVEAY+ + L +EA+ +++ +P W L+
Sbjct: 205 IERHQTTSHTPEALFRLVEAYLTIGLNEEAKRNGAVLGYNFPGDRWYVDAYRLL 258
>gi|332188478|ref|ZP_08390200.1| hypothetical protein SUS17_3597 [Sphingomonas sp. S17]
gi|332011490|gb|EGI53573.1| hypothetical protein SUS17_3597 [Sphingomonas sp. S17]
Length = 311
Score = 132 bits (332), Expect = 4e-29, Method: Composition-based stats.
Identities = 71/235 (30%), Positives = 116/235 (49%), Gaps = 3/235 (1%)
Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
G D R +Y A L + + +A F++ R P++ AR++
Sbjct: 23 GCA---RNRTRTDLPYVARDVGTLYTAAKQRLDQHRYKEAALLFDEVERQHPYSIWARRA 79
Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
LMSAF Y Y Q+ + ++ +P +++ Y YYL+ + Y + I+DV DQ+ T+
Sbjct: 80 QLMSAFSYYLGRDYTQSIQSAQRFLAVHPGNRDAPYAYYLIALGYYEQIQDVTRDQKITR 139
Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
L + ++ RY N+ Y AR V + + LA KE+EIGR+Y R +++AA RF+ V
Sbjct: 140 QALDALGELMRRYPNTRYAADARLKVDLVNDHLAGKEMEIGRFYEDRHQWLAASMRFRTV 199
Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+ Y H EA+ RL E Y+AL + EA +++ YP W L++
Sbjct: 200 VDKYQTTSHTPEALMRLTETYLALGVRPEAERAAAVLGANYPGSDWYNRAYKLMR 254
>gi|316933197|ref|YP_004108179.1| outer membrane assembly lipoprotein YfiO [Rhodopseudomonas
palustris DX-1]
gi|315600911|gb|ADU43446.1| outer membrane assembly lipoprotein YfiO [Rhodopseudomonas
palustris DX-1]
Length = 302
Score = 132 bits (332), Expect = 4e-29, Method: Composition-based stats.
Identities = 75/251 (29%), Positives = 127/251 (50%), Gaps = 3/251 (1%)
Query: 24 LTIFFSIAVCFLVGWERQS--SRDVYLDSVTDVRYQREVYEKAVLFLKE-QNFSKAYEYF 80
+ + L G + + + D ++Y + + + + ++ A + F
Sbjct: 28 MIVGVLALSLPLGGCGTGALWDKFLAKDDKMVDEPADKLYNEGLYLMNQDKDTKGAAKKF 87
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
+ R P++ ARKSLLMSA+ Y AG Y Y+T +P S + Y YL+ S
Sbjct: 88 EEVDRQHPYSDWARKSLLMSAYAYYQAGDYDSCIGAATRYVTLHPGSPDAAYAQYLIAAS 147
Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
+ I D+ DQ T+ + + ++ +Y S Y A+ + R+QLA KE+++GRYY
Sbjct: 148 HYDQIPDISRDQGRTEKAIASLEEVIRKYPTSEYANSAKQKLEGARDQLAGKEMDVGRYY 207
Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
+ + +Y AAI RF+ V+ Y H EEA+ARL EAY+A+ ++ EA+ +++ +P
Sbjct: 208 MSKRDYAAAINRFKTVVTRYQTTRHVEEALARLTEAYMAIGIVGEAQTAAAVLGHNFPDS 267
Query: 261 YWARYVETLVK 271
W + TLVK
Sbjct: 268 KWYKDAYTLVK 278
>gi|16126227|ref|NP_420791.1| competence lipoprotein ComL [Caulobacter crescentus CB15]
gi|18202701|sp|Q9A6U9|Y1984_CAUCR RecName: Full=UPF0169 lipoprotein CC_1984; Flags: Precursor
gi|13423451|gb|AAK23959.1| competence lipoprotein ComL, putative [Caulobacter crescentus CB15]
Length = 305
Score = 132 bits (331), Expect = 4e-29, Method: Composition-based stats.
Identities = 72/234 (30%), Positives = 124/234 (52%), Gaps = 3/234 (1%)
Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
G ++ + + R +Y L N+++A +YF + R P++ +R+S
Sbjct: 24 GCAGKAKKPTLVYE---ERPVELLYSTGADRLDRGNWNEAVDYFREVERQHPYSEWSRRS 80
Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
+LM+ + Y +Y +A + +I+ YP + + Y +YL + Y + I DV DQ AT+
Sbjct: 81 ILMTGYAHYMGNQYAEAIGDADRFISLYPGNPSAQYAFYLKAICYFEQIVDVNRDQAATE 140
Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
L + +V+RY N+ Y AR + + +QLA KE+ IGR+YLK G+ +AAI RF+ V
Sbjct: 141 QALAALRDVVQRYPNTEYATDARLKIDMVNDQLAGKEMAIGRWYLKNGQTLAAIGRFKAV 200
Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
+ + H EA+ RLVEAY+ + L +EA+ +++ +P W L+
Sbjct: 201 IERHQTTSHTPEALFRLVEAYLTIGLNEEAKRNGAVLGYNFPGDRWYVDAYRLL 254
>gi|192292404|ref|YP_001993009.1| outer membrane assembly lipoprotein YfiO [Rhodopseudomonas
palustris TIE-1]
gi|192286153|gb|ACF02534.1| outer membrane assembly lipoprotein YfiO [Rhodopseudomonas
palustris TIE-1]
Length = 302
Score = 132 bits (331), Expect = 5e-29, Method: Composition-based stats.
Identities = 75/251 (29%), Positives = 124/251 (49%), Gaps = 3/251 (1%)
Query: 24 LTIFFSIAVCFLVGWERQS--SRDVYLDSVTDVRYQREVYEKAVLFLKE-QNFSKAYEYF 80
+ L G + + + D ++Y + + + + ++ A + F
Sbjct: 28 MIFSLLALSLPLGGCGTGALWDKFLAKDDKMVDEPADKLYNEGLYLMNQDKDTKGAAKKF 87
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
+ R P++ ARKSLLMSA+ Y AG Y Y+T +P S + Y YL+ S
Sbjct: 88 EEVDRQHPYSDWARKSLLMSAYAYYQAGDYDSCIGSATRYVTLHPGSPDAAYAQYLIAAS 147
Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
I D+ DQ T+ + + ++ +Y S Y A+ + R+QLA KE++IGRYY
Sbjct: 148 NYDQIPDISRDQGRTEKAIAALEEVIRKYPTSEYANSAKQKLEGARDQLAGKEMDIGRYY 207
Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
+ + +Y AAI RF+ V+ Y H EEA+ARL EAY+A+ ++ EA+ +++ +P
Sbjct: 208 MSKRDYAAAINRFKTVVTRYQTTRHVEEALARLTEAYMAIGIVGEAQTAAAVLGHNFPDS 267
Query: 261 YWARYVETLVK 271
W + LVK
Sbjct: 268 RWYKDAYNLVK 278
>gi|222149127|ref|YP_002550084.1| hypothetical protein Avi_2880 [Agrobacterium vitis S4]
gi|221736112|gb|ACM37075.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 289
Score = 132 bits (331), Expect = 5e-29, Method: Composition-based stats.
Identities = 87/250 (34%), Positives = 138/250 (55%), Gaps = 1/250 (0%)
Query: 23 ALTIFFSIAVCF-LVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
L + SIA L+ + +Y + + +K N ++A F+
Sbjct: 15 MLAVCLSIAGVAPLLSACNTDKDIDITKLGAETDPPETLYNQGLANIKAGNLAEASRKFD 74
Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
+ PF+ ++K+L+MS FV+Y GKY +A S G Y+T YP +K+ YV YL+G+S
Sbjct: 75 AVDKQNPFSDWSQKALVMSTFVKYRQGKYTEAISTGTRYMTLYPSTKDSAYVQYLIGLSN 134
Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
+ I +V DQ+ + L+ M ++V+ Y S YV A+ + R+QLA KE++IGRYYL
Sbjct: 135 WRQIPNVTQDQKFSSRTLEAMDKVVKNYPTSEYVSDAQEKMRFARDQLAGKEMQIGRYYL 194
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
+R EY+A+I RF+ V+ Y EEA+ARLVEAY A+ ++ EA+ +++ YP
Sbjct: 195 ERKEYLASIQRFRNVVEQYPTTNQIEEALARLVEAYYAMGVVQEAQTAAAVLGHNYPDSK 254
Query: 262 WARYVETLVK 271
W + L+K
Sbjct: 255 WYKDSFELLK 264
>gi|150397273|ref|YP_001327740.1| hypothetical protein Smed_2072 [Sinorhizobium medicae WSM419]
gi|150028788|gb|ABR60905.1| conserved hypothetical transmembrane protein [Sinorhizobium medicae
WSM419]
Length = 288
Score = 132 bits (331), Expect = 5e-29, Method: Composition-based stats.
Identities = 77/240 (32%), Positives = 125/240 (52%), Gaps = 1/240 (0%)
Query: 32 VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91
+ + + +Y + + L ++A F + PF+
Sbjct: 26 SSLITAC-QNDPDIDITKLTAETDPPEVLYNQGLANLNAGKTTEAARKFEAIDKQHPFSE 84
Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151
ARK+L+M+AFV Y G+YQ A + Y+ YP+S++ Y Y+ G++Y + I V D
Sbjct: 85 YARKALVMNAFVSYRNGQYQDAINSTNRYLNLYPQSEDAAYAQYIQGLAYTKQIPSVTQD 144
Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
QR ++ M +V++Y +S YV A+ + R+QLA KE+++GRYYL+R EY+AAI
Sbjct: 145 QRPAMRAMEAMQVVVDKYPDSEYVDDAQAKIRFARDQLAGKEMQVGRYYLERKEYLAAIS 204
Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
RF+ V+ Y EEA+ARLVEAY A+ + EA+ +++ YP W L++
Sbjct: 205 RFRTVVERYPTTNQVEEALARLVEAYYAMGVTGEAQTAAAVLGHNYPDSQWYADSYKLLQ 264
>gi|86749129|ref|YP_485625.1| putative lipoprotein [Rhodopseudomonas palustris HaA2]
gi|86572157|gb|ABD06714.1| putative lipoprotein [Rhodopseudomonas palustris HaA2]
Length = 301
Score = 132 bits (330), Expect = 6e-29, Method: Composition-based stats.
Identities = 77/252 (30%), Positives = 129/252 (51%), Gaps = 4/252 (1%)
Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTD---VRYQREVYEKAVLFLKE-QNFSKAYEY 79
L + L G + D +L D ++Y + + + + ++ A +
Sbjct: 26 LVASLMLLALPLGGCGTGAIWDKFLAKDEDKFNDEPADKLYNEGLYLMNKEKDLKGASKK 85
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
F + R P++ ARKSLLMSA+ Y AG Y Y+T +P S + Y YL+
Sbjct: 86 FEEVDRQHPYSDWARKSLLMSAYSFYQAGDYDSCIGSATRYVTLHPGSPDAAYAQYLIAA 145
Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
S+ I D+ DQ T+ + + ++ +Y S Y A+ + R+QLA KE+++GR+
Sbjct: 146 SHYDQIPDISRDQGRTEKAIAALEEVIRKYPTSEYANQAKQKLEGARDQLAGKEMDVGRF 205
Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
Y+++ +Y AAI RF+ V+ Y H EEA+ARL EAY+A+ ++ EA+ +++ +P
Sbjct: 206 YMEKRDYAAAINRFKTVVTRYQTTRHVEEALARLTEAYMAIGIVGEAQTAAAVLGHNFPD 265
Query: 260 GYWARYVETLVK 271
W + TLVK
Sbjct: 266 SRWYKDAYTLVK 277
>gi|39936582|ref|NP_948858.1| putative lipoprotein [Rhodopseudomonas palustris CGA009]
gi|39650438|emb|CAE28961.1| Protein of unknown function UPF0169 [Rhodopseudomonas palustris
CGA009]
Length = 302
Score = 131 bits (329), Expect = 8e-29, Method: Composition-based stats.
Identities = 75/251 (29%), Positives = 124/251 (49%), Gaps = 3/251 (1%)
Query: 24 LTIFFSIAVCFLVGWERQS--SRDVYLDSVTDVRYQREVYEKAVLFLKE-QNFSKAYEYF 80
+ L G + + + D ++Y + + + + ++ A + F
Sbjct: 28 MVFSLLALSLPLGGCGTGALWDKFLAKDDKMVDEPADKLYNEGLYLMNQDKDTKGAAKKF 87
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
+ R P++ ARKSLLMSA+ Y AG Y Y+T +P S + Y YL+ S
Sbjct: 88 EEVDRQHPYSDWARKSLLMSAYAYYQAGDYDSCIGSATRYVTLHPGSPDAAYAQYLIAAS 147
Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
I D+ DQ T+ + + ++ +Y S Y A+ + R+QLA KE++IGRYY
Sbjct: 148 NYDQIPDISRDQGRTEKAIAALEEVIRKYPTSEYANSAKQKLEGARDQLAGKEMDIGRYY 207
Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
+ + +Y AAI RF+ V+ Y H EEA+ARL EAY+A+ ++ EA+ +++ +P
Sbjct: 208 MSKRDYAAAINRFKTVVTRYQTTRHVEEALARLTEAYMAIGIVGEAQTAAAVLGHNFPDS 267
Query: 261 YWARYVETLVK 271
W + LVK
Sbjct: 268 RWYKDAYNLVK 278
>gi|258542978|ref|YP_003188411.1| hypothetical protein APA01_19070 [Acetobacter pasteurianus IFO
3283-01]
gi|256634056|dbj|BAI00032.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01]
gi|256637116|dbj|BAI03085.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-03]
gi|256640168|dbj|BAI06130.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-07]
gi|256643225|dbj|BAI09180.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-22]
gi|256646280|dbj|BAI12228.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-26]
gi|256649333|dbj|BAI15274.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-32]
gi|256652319|dbj|BAI18253.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256655377|dbj|BAI21304.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-12]
Length = 345
Score = 131 bits (328), Expect = 1e-28, Method: Composition-based stats.
Identities = 69/252 (27%), Positives = 120/252 (47%), Gaps = 2/252 (0%)
Query: 18 QLYKFALTIFFSIAVC-FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76
QL + L S+A+ L G + + +Y + L+ + ++ A
Sbjct: 9 QLLRHVLPRVLSVALLTSLAGCGLFNENKKLPPAPKI-AAPETLYNNGIDALRTRRYALA 67
Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
F +++P++G + LM + Y GKY +A +I+ +P S + Y YYL
Sbjct: 68 ASEFETLQQNYPYSGYIANAQLMEGYAYYLKGKYPEAVQQLNRFISLHPTSSDSAYAYYL 127
Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196
+ + + I DV DQ+ T + + ++ R+ S Y + A+ + + R+ LA KE+ +
Sbjct: 128 RALCFYEQIADVQRDQQGTAESMDALEEVITRFPQSKYARDAQLKIDLCRDHLAGKEMLV 187
Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
GRYY + Y AI R+Q V+ ++ H EA+ R+VE Y+ L L D+AR+ ++
Sbjct: 188 GRYYQREKNYEGAINRYQRVVQDFQTTNHVPEALERMVEVYLDLGLTDQARKSAIVLGYN 247
Query: 257 YPQGYWARYVET 268
YP W RY
Sbjct: 248 YPGSKWYRYAYD 259
>gi|209545278|ref|YP_002277507.1| outer membrane assembly lipoprotein YfiO [Gluconacetobacter
diazotrophicus PAl 5]
gi|209532955|gb|ACI52892.1| outer membrane assembly lipoprotein YfiO [Gluconacetobacter
diazotrophicus PAl 5]
Length = 319
Score = 131 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 64/244 (26%), Positives = 119/244 (48%)
Query: 28 FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87
F+ L + D + V +Y + L++Q ++ A F +++
Sbjct: 22 FASLALILSVAACGGDKKAINDMESHVPPVETLYNNGIDALRDQRYALAAAEFEVLQQNY 81
Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147
P++G + LM + Y KY A + ++ +P S + Y +YL + Y + + +
Sbjct: 82 PYSGYVANAQLMEGYANYLQDKYADAVQQLDRFLELHPTSADAAYAFYLRALCYYEQVAE 141
Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
V DQ+ T + + ++ R+ SPY + A+ V + R+ LA KE+ +GR+Y ++ Y
Sbjct: 142 VQRDQQGTVEAMNALEEVITRFPQSPYARDAQLKVDLCRDHLAGKEMLVGRFYEEQRNYE 201
Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
A+ R+Q V+ ++ H EA+ RLVE Y+ L L D+AR S++ YP W R+
Sbjct: 202 GAVNRYQRVVQDFQTTNHVPEALERLVEVYLDLGLTDQARRTASVLSYNYPGSKWYRFSY 261
Query: 268 TLVK 271
+++
Sbjct: 262 NMLR 265
>gi|254470086|ref|ZP_05083490.1| outer membrane assembly lipoprotein YfiO [Pseudovibrio sp. JE062]
gi|211960397|gb|EEA95593.1| outer membrane assembly lipoprotein YfiO [Pseudovibrio sp. JE062]
Length = 288
Score = 131 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 83/252 (32%), Positives = 133/252 (52%), Gaps = 3/252 (1%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
K + + G +D D D ++ +A+ + S A +
Sbjct: 16 LKRVIRYASLALALVVAGCAT---KDDVDDLALDETPAEVMFNEALALRASGDISGAAKK 72
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
F + R +P++ ARKSL+ A++ + GKY +A + E + T YP +K+ Y +++G
Sbjct: 73 FYELDRVYPYSEFARKSLINIAYLNFKMGKYPEAVAAAERFTTLYPGNKDSAYALFIIGE 132
Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
SY + I DV DQ T L M +V+RY +S Y K AR + +QLA KE+E+GRY
Sbjct: 133 SYFRQIPDVGRDQAVTAKALDAMREVVQRYPDSEYTKQARQRIRATEDQLAGKEMEVGRY 192
Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
YL R Y+A+I RF++V+ NY H EEA+ RL E+Y AL + +EA+ +++ +PQ
Sbjct: 193 YLARRNYLASINRFKVVVTNYQTTRHVEEALYRLTESYYALGVTNEAQTAAAVLGHNFPQ 252
Query: 260 GYWARYVETLVK 271
W + +L+K
Sbjct: 253 SQWYQDAYSLLK 264
>gi|146342490|ref|YP_001207538.1| TPR repeat-containing protein [Bradyrhizobium sp. ORS278]
gi|146195296|emb|CAL79321.1| Conserved hypothetical protein; Putative Lipoprotein with
tetratricopeptide repeat (TPR) domain [Bradyrhizobium
sp. ORS278]
Length = 297
Score = 131 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 75/255 (29%), Positives = 126/255 (49%), Gaps = 3/255 (1%)
Query: 20 YKFALTIFFSIAVCFLVGWERQS--SRDVYLDSVTDVRYQREVYEKAVLFLK-EQNFSKA 76
+ ++ L G + + D ++Y + + L +++ A
Sbjct: 19 RRMRFAASLALLAFPLAGCGTGGLWDKFLAKDDTFVDEPADKLYNEGLYMLNEKKDMKGA 78
Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
+ F + R P++ ARKSLLMSA+ Y AG Y Y+T +P S + Y YL
Sbjct: 79 NKKFEEVDRQHPYSDWARKSLLMSAYASYQAGDYDGCIGSATRYVTLHPGSPDAAYAQYL 138
Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196
+ S+ I D+ DQ T+ + + +V +Y NS Y A+ + R+QLA KE+++
Sbjct: 139 IAASHYDQIPDISRDQGRTEKAIAALEEVVRKYPNSEYATNAKAKMEGARDQLAGKEMDV 198
Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
GRYY+++ +Y AAI RF+ V+ Y H EEA+ RL EAY+ + ++ EA+ +++
Sbjct: 199 GRYYMQKRDYTAAINRFKTVVTQYQTTRHVEEALFRLTEAYMTIGIVGEAQTAAAVLGHN 258
Query: 257 YPQGYWARYVETLVK 271
+P W + LVK
Sbjct: 259 FPDSKWYKDAYNLVK 273
>gi|227822643|ref|YP_002826615.1| competence lipoprotein ComL [Sinorhizobium fredii NGR234]
gi|227341644|gb|ACP25862.1| competence lipoprotein ComL [Sinorhizobium fredii NGR234]
Length = 288
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 76/240 (31%), Positives = 129/240 (53%), Gaps = 1/240 (0%)
Query: 32 VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91
+ + + +Y + + L ++A F+ R PF+
Sbjct: 26 SSLITAC-QNDPDIDITKLTAETDPPEVLYNQGLANLNAGKTTEAGRKFDAIDRQHPFSE 84
Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151
ARK+L+M+AFV Y G+YQ A + Y+ YP+S++ Y Y+ G++Y + I V D
Sbjct: 85 YARKALVMNAFVAYRNGQYQDAINSTNRYLNLYPQSEDAAYAQYIQGLAYTKQIPSVTQD 144
Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
Q+ + ++ M +V++Y +S YV A+ + R+QLA KE+++GRYYL+R EY+AAI
Sbjct: 145 QKPAQRAIEAMQVVVDKYPDSEYVDDAQSKIRFARDQLAGKEMQVGRYYLERKEYLAAIS 204
Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
RF++V+ Y + EEA+ARLVEAY ++ + EA+ +++ YP W L++
Sbjct: 205 RFRVVVEQYPNTNQVEEALARLVEAYFSMGVTAEAQTAAAVLGHNYPDSQWYADSYKLLQ 264
>gi|27381705|ref|NP_773234.1| hypothetical protein bll6594 [Bradyrhizobium japonicum USDA 110]
gi|27354874|dbj|BAC51859.1| bll6594 [Bradyrhizobium japonicum USDA 110]
Length = 296
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 72/249 (28%), Positives = 124/249 (49%), Gaps = 3/249 (1%)
Query: 26 IFFSIAVCFLVGWERQS--SRDVYLDSVTDVRYQREVYEKAVLFLK-EQNFSKAYEYFNQ 82
+ F + L G + + D ++Y + + + +++ A + F +
Sbjct: 24 VTFIMLALPLAGCGTGALWDKFTAKDDTFVEEPADKIYNEGLYLMNEKKDMKAANKKFEE 83
Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
R P++ ARKSLLMSA+ Y G Y Y+T +P S + Y YL+ S+
Sbjct: 84 VDRQHPYSDWARKSLLMSAYASYQGGDYDGCIGAATRYVTLHPGSPDAAYAQYLIAASHY 143
Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
I D+ DQ T+ + + ++ +Y S Y A+ + R+QLA KE+ +GRYY++
Sbjct: 144 DQIPDISRDQSRTEKAIASLEEVIRKYPTSEYATSAKAKIEGARDQLAGKEMNVGRYYMQ 203
Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
+ +Y AAI R++ V+ Y H EEA+ RL EAY+A+ ++ EA+ +++ +P W
Sbjct: 204 KRDYTAAINRYKAVVTQYQTTRHVEEALYRLTEAYMAIGIVGEAQTAAAVLGHNFPDSRW 263
Query: 263 ARYVETLVK 271
+ LVK
Sbjct: 264 YKDAYNLVK 272
>gi|162148968|ref|YP_001603429.1| hypothetical protein GDI_3198 [Gluconacetobacter diazotrophicus PAl
5]
gi|161787545|emb|CAP57141.1| conserved hypothetical protein [Gluconacetobacter diazotrophicus
PAl 5]
Length = 319
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 64/244 (26%), Positives = 119/244 (48%)
Query: 28 FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87
F+ L + D + V +Y + L++Q ++ A F +++
Sbjct: 22 FASLALILAVAACGGDKKAINDMESHVPPVETLYNNGIDALRDQRYALAAAEFEVLQQNY 81
Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147
P++G + LM + Y KY A + ++ +P S + Y +YL + Y + + +
Sbjct: 82 PYSGYVANAQLMEGYANYLQDKYADAVQQLDRFLELHPTSADAAYAFYLRALCYYEQVAE 141
Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
V DQ+ T + + ++ R+ SPY + A+ V + R+ LA KE+ +GR+Y ++ Y
Sbjct: 142 VQRDQQGTVEAMNALEEVITRFPQSPYARDAQLKVDLCRDHLAGKEMLVGRFYEEQRNYE 201
Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
A+ R+Q V+ ++ H EA+ RLVE Y+ L L D+AR S++ YP W R+
Sbjct: 202 GAVNRYQRVVQDFQTTNHVPEALERLVEVYLDLGLTDQARRTASVLSYNYPGSKWYRFSY 261
Query: 268 TLVK 271
+++
Sbjct: 262 NMLR 265
>gi|288958800|ref|YP_003449141.1| lipoprotein [Azospirillum sp. B510]
gi|288911108|dbj|BAI72597.1| lipoprotein [Azospirillum sp. B510]
Length = 271
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 73/249 (29%), Positives = 130/249 (52%), Gaps = 6/249 (2%)
Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
+ L + + L + R ++ +A ++++ F KA + ++
Sbjct: 6 YRLPLTAILLSAALSACSSTK------EDAYVERPADQLLSEADAAMRDEAFKKAAKLYD 59
Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
+ R P++ A K+ L++A+ Y KY A + +I +P S +VDY YY+ +SY
Sbjct: 60 EVERQHPYSDSASKAQLLAAYAHYQDLKYDDAILALDRFIQLHPGSPDVDYAYYMRALSY 119
Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
+ I DV DQ+ T+ L + +V R+ +S Y + A+ + + + LA KE+E+GR+YL
Sbjct: 120 YEQITDVRRDQKMTRQALDALQEVVRRFPDSKYARDAKLKIDLTNDHLAGKEMEVGRFYL 179
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
++ +Y AAI RF++V+ NY H EA+ RLVE Y+AL + DEA+ +++ +P
Sbjct: 180 RQRQYTAAINRFRVVVENYQTTSHVPEALHRLVECYLALGVTDEAKAAAAVLGHNFPGSE 239
Query: 262 WARYVETLV 270
W L+
Sbjct: 240 WYTDSYALL 248
>gi|323137883|ref|ZP_08072958.1| outer membrane assembly lipoprotein YfiO [Methylocystis sp. ATCC
49242]
gi|322396886|gb|EFX99412.1| outer membrane assembly lipoprotein YfiO [Methylocystis sp. ATCC
49242]
Length = 302
Score = 130 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 79/236 (33%), Positives = 131/236 (55%)
Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
G+ + Y + ++Y + + LK++++ A + F + +P + +RK
Sbjct: 43 SGFGLFGGGEKYKTEILPDIPADDLYNQGLAKLKKKDYEGAAKKFGDLEKQYPSSEWSRK 102
Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
+LLM+ F Q+ G Y ++ + YI YP S + YVYYL GMS+ + DV DQ+
Sbjct: 103 ALLMTTFAQFQKGAYDESVQSAQRYIGLYPNSADTPYVYYLAGMSFYNQVPDVMRDQQPA 162
Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
+ L+ ++++++Y S YV AR+ + V R+QLAAKE+ +GR+YL R Y AAI RF
Sbjct: 163 EKALEVFTQLIQKYPKSEYVTDARYKIQVTRDQLAAKEMNVGRFYLTRKNYPAAINRFHD 222
Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
VL Y H EEA+ RL EAY+A+ + +EA+ +++ +P W + L+K
Sbjct: 223 VLGKYQTTRHTEEALYRLTEAYMAMGVTNEAQTAAAILGHNFPDSQWYKDAHALLK 278
>gi|144897937|emb|CAM74801.1| competence lipoprotein ComL [Magnetospirillum gryphiswaldense
MSR-1]
Length = 271
Score = 130 bits (325), Expect = 3e-28, Method: Composition-based stats.
Identities = 74/243 (30%), Positives = 128/243 (52%), Gaps = 7/243 (2%)
Query: 28 FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87
L + V R E+Y +A+ +++ + KA F++ R
Sbjct: 15 LIATALLLSACSDKKDEYV-------ERPVEELYNEAMDLVEKGEYYKAALAFDEVDRQH 67
Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147
P++ A K+ LM+A+V Y KY A + +I +P +K+ Y YYL G+ Y + + D
Sbjct: 68 PYSVWATKAQLMNAYVLYERNKYPDALVALDRFIQLHPGNKDAPYAYYLKGLCYYEQVTD 127
Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
V DQ+ T++ L+ + +V+RY S Y + A+ V + R+ LA KE+ I RYY KR +++
Sbjct: 128 VARDQKMTEMALKSLQEVVDRYPASSYARDAKLKVDLTRDHLAGKEMNIARYYQKRDQWL 187
Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
AA+ R+++V+ Y H EA+ R+VE Y+ L L +EA++ ++I +P W
Sbjct: 188 AALNRYKIVVEQYQTTSHVPEALHRMVEIYLTLGLTEEAKKTAAVIGHNFPGSDWYEDTF 247
Query: 268 TLV 270
++V
Sbjct: 248 SMV 250
>gi|298293090|ref|YP_003695029.1| outer membrane assembly lipoprotein YfiO [Starkeya novella DSM 506]
gi|296929601|gb|ADH90410.1| outer membrane assembly lipoprotein YfiO [Starkeya novella DSM 506]
Length = 305
Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats.
Identities = 72/249 (28%), Positives = 123/249 (49%), Gaps = 1/249 (0%)
Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
+ L G DV + Y + + + + +++A + F
Sbjct: 34 LRLAGLVMLGASLGGCASWFDTSTEAKVYPDV-PAEQRYNEGLTLMAKDEYAEAIKRFED 92
Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
R P++ ARK++LM A++ Y+ Y ++ S Y+ +P S + Y YL+ SY
Sbjct: 93 VDRQHPYSEWARKAVLMIAYINYAQANYDESISAARRYLALHPGSADAAYAQYLIAASYF 152
Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
I D+ DQ T+ ++ + +V ++ N+ Y A+ + V R+QLA KE+ IGRYYL
Sbjct: 153 DQIPDISRDQARTERAMEALDEVVRKFPNTEYAVSAKKKLEVARDQLAGKEMMIGRYYLD 212
Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
+ Y AI RF++V+ Y H EEA+ RL EAY+AL ++ EA+ +++ +P W
Sbjct: 213 QRNYAGAINRFKVVVTRYQTTRHVEEALYRLTEAYMALGVVGEAQTSAAVLGYNFPDSTW 272
Query: 263 ARYVETLVK 271
+ LV+
Sbjct: 273 YKDAYKLVQ 281
>gi|91977850|ref|YP_570509.1| putative lipoprotein [Rhodopseudomonas palustris BisB5]
gi|91684306|gb|ABE40608.1| putative lipoprotein [Rhodopseudomonas palustris BisB5]
Length = 301
Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats.
Identities = 77/252 (30%), Positives = 128/252 (50%), Gaps = 4/252 (1%)
Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTD---VRYQREVYEKAVLFLKE-QNFSKAYEY 79
L ++ L G + D +L D ++Y + + + + ++ A +
Sbjct: 26 LMASLAMLALPLGGCGTGAIWDKFLAKDEDKFNDEPADKLYNEGLYLMNKEKDLKAASKK 85
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
F + R P++ ARKSLLMSA+ Y AG Y Y+T +P S + Y YL+
Sbjct: 86 FEEVDRQHPYSDWARKSLLMSAYSFYQAGDYDSCIGSATRYVTLHPGSPDAAYAQYLIAA 145
Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
S+ I DV DQ T+ + + ++ +Y S Y A+ + R+QLA KE+++GRY
Sbjct: 146 SHYDQIPDVSRDQGRTEKAIAALEEVIRKYPTSEYANQAKQKLEGARDQLAGKEMDVGRY 205
Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
Y+++ +Y AAI RF+ V+ Y H EEA+ARL EAY+ + ++ EA+ +++ +P
Sbjct: 206 YMQKRDYTAAINRFKTVVTRYQTTRHVEEALARLTEAYMTIGIVGEAQTAAAVLGHNFPD 265
Query: 260 GYWARYVETLVK 271
W + LVK
Sbjct: 266 SRWYKDAYNLVK 277
>gi|220927172|ref|YP_002502474.1| outer membrane assembly lipoprotein YfiO [Methylobacterium nodulans
ORS 2060]
gi|219951779|gb|ACL62171.1| outer membrane assembly lipoprotein YfiO [Methylobacterium nodulans
ORS 2060]
Length = 299
Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats.
Identities = 74/254 (29%), Positives = 137/254 (53%), Gaps = 5/254 (1%)
Query: 23 ALTIFFSIAVCFLVGWERQSS-----RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
+ L G + S + Y + R ++Y + + L++ ++ +A
Sbjct: 15 LRVALLAACGAGLAGCDALDSINPFGPEKYKPEIIQRRPADKIYSEGLAKLEDHDYDEAV 74
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
+ F +++ ++ +RK++LM+A+ Y KY+ A + + Y+ ++P SK+ Y Y++
Sbjct: 75 KRFENLDKEYAYSDWSRKAVLMTAYSNYEGQKYEDAITAAKRYLQRHPGSKDAAYAQYIL 134
Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
MS+ + I DV DQ ++ L + +V++Y S Y A+ + + R+QLA KE+ IG
Sbjct: 135 AMSHYKQIPDVTRDQERSERALAALQELVQKYPTSEYAADAKAKIQITRDQLAGKEMAIG 194
Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
RYYL+R + AAI RF+ V++ Y HAEEA+ RL EAY+AL ++ EA+ +++ +
Sbjct: 195 RYYLERRNFPAAINRFRDVVSRYQTTRHAEEALERLAEAYMALGIVGEAQTAAAVLGHNF 254
Query: 258 PQGYWARYVETLVK 271
P W + L++
Sbjct: 255 PDSPWYKDAYALLQ 268
>gi|197105773|ref|YP_002131150.1| DNA uptake lipoprotein [Phenylobacterium zucineum HLK1]
gi|196479193|gb|ACG78721.1| DNA uptake lipoprotein [Phenylobacterium zucineum HLK1]
Length = 305
Score = 129 bits (323), Expect = 4e-28, Method: Composition-based stats.
Identities = 72/227 (31%), Positives = 118/227 (51%)
Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
V + R +Y L +++A YF + R P++ +R+S+LM A+
Sbjct: 27 NKKKPRLVYEERPVELLYATGANRLDRGLWNQAINYFQEVERQHPYSEWSRRSILMQAYA 86
Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
Y + Y +A + +I YP + Y +Y+ + Y + I DV DQ AT L+ +
Sbjct: 87 HYQSNDYPEAIGDADRFIQLYPGNPAAAYAHYIKAICYFEQIVDVGRDQAATGQALEALR 146
Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
+V+RY S Y + AR + + +QLA KE+ +GR+YL+ G+ +AA+ RF+ V+ Y
Sbjct: 147 AVVQRYPASEYAQDARLKIDMVNDQLAGKEMTVGRWYLRNGDTLAAVNRFKTVVDRYQTT 206
Query: 224 EHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
H EA+ RLVEAY+ L L +EA+ +++ YP W R L+
Sbjct: 207 THTPEALYRLVEAYLTLGLTEEAKRNGAVLGYNYPGDPWYRDAYRLL 253
>gi|299131916|ref|ZP_07025111.1| outer membrane assembly lipoprotein YfiO [Afipia sp. 1NLS2]
gi|298592053|gb|EFI52253.1| outer membrane assembly lipoprotein YfiO [Afipia sp. 1NLS2]
Length = 314
Score = 129 bits (323), Expect = 4e-28, Method: Composition-based stats.
Identities = 79/246 (32%), Positives = 128/246 (52%), Gaps = 3/246 (1%)
Query: 29 SIAVCFLVGWERQS--SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK-AYEYFNQCSR 85
+ L G + + D + ++Y + + L E+N K A + F + R
Sbjct: 45 IVLAAPLGGCGTGNLWDKFFAKDETFVDQPADKLYNEGLFLLNEKNDRKGAIKKFEEVDR 104
Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
P++ ARKSLLMSA+ Y +G Y + + YI+ +P S + Y YLV +S I
Sbjct: 105 QHPYSDWARKSLLMSAYASYQSGDYDECIANANRYISLHPGSPDAAYAQYLVAVSNYDQI 164
Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
DV DQ T+ + + ++ +Y NS Y A+ + R+QLA +E+ IGRYY+ + +
Sbjct: 165 PDVSRDQGRTEKAIAALEEVIRKYPNSEYATTAKKKIEGARDQLAGREMTIGRYYMDKRD 224
Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
Y AI RF++V+ Y H EEA+ARL EAY+A+ ++ EA+ +++ +P W +
Sbjct: 225 YTGAINRFKVVVTQYQTTRHVEEALARLTEAYMAIGVVSEAQTAAAVLGHNFPDSRWYKD 284
Query: 266 VETLVK 271
LVK
Sbjct: 285 AYNLVK 290
>gi|159185041|ref|NP_355049.2| hypothetical protein Atu2084 [Agrobacterium tumefaciens str. C58]
gi|159140315|gb|AAK87834.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
Length = 288
Score = 129 bits (323), Expect = 4e-28, Method: Composition-based stats.
Identities = 77/253 (30%), Positives = 136/253 (53%), Gaps = 1/253 (0%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ A+++ A + + + +Y++ + + N ++A
Sbjct: 13 MRGIAVSLMLVGASVVVTACQSDPD-IDITKLGVETDPPDVLYKQGLANMNAGNMTEASR 71
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
F + +PF +K+L+M F+ K A + G ++ QYP SK+ YV Y++G
Sbjct: 72 KFEAIDKQYPFTEWGQKALVMQTFIATRTNKNDVAITSGSRFLRQYPRSKDAAYVQYMIG 131
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
++Y++ I DV DQRA + ++ M+++V Y +S YV A+ + R+QLA +E+++GR
Sbjct: 132 LAYSKQISDVTQDQRAAQRTIEAMNKVVNDYPSSEYVADAQAKIRFARDQLAGREMQVGR 191
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
YYL+R EY+AA+ RF++V+ Y + EEA+ARL EAY A+ L+DEA+ +++ YP
Sbjct: 192 YYLERKEYLAAVSRFRIVVEQYQNTNQIEEALARLTEAYYAMGLVDEAQTAAAVLGNNYP 251
Query: 259 QGYWARYVETLVK 271
W L+K
Sbjct: 252 DSQWYADSYKLLK 264
>gi|240850884|ref|YP_002972284.1| competence lipoprotein ComL precursor [Bartonella grahamii as4aup]
gi|240268007|gb|ACS51595.1| competence lipoprotein ComL precursor [Bartonella grahamii as4aup]
Length = 297
Score = 129 bits (323), Expect = 4e-28, Method: Composition-based stats.
Identities = 86/256 (33%), Positives = 134/256 (52%), Gaps = 1/256 (0%)
Query: 17 YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDV-RYQREVYEKAVLFLKEQNFSK 75
+ + + L + + C L G + + + +Y +A+ L+
Sbjct: 16 FNIVRKILGVVLLGSTCMLAGCLFKEKNTLDPSAYVLKIEPPDVLYNQALASLESGKLGD 75
Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
A + F + + + + RKSL+M AF Y GKY + S+ + YIT YP S + Y YY
Sbjct: 76 ASKKFLKIEKQYAYTDWGRKSLVMGAFTNYRLGKYDDSISMAQRYITLYPGSTDSAYAYY 135
Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
++G+S + I DV DQR TK + M ++ERY NS YVK A+ + GR QLA KE++
Sbjct: 136 IIGLSSFRRIPDVTRDQRDTKRAIAAMQLLIERYPNSEYVKDAKDKIRFGREQLAGKEMQ 195
Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
IGRYY + Y+AA RF+ V+ YSD EEA+ RL E +AL L EA+ +++
Sbjct: 196 IGRYYEEGRRYLAASRRFRTVVEEYSDTNQIEEALFRLTEVNLALGLTAEAQTAAAILGR 255
Query: 256 RYPQGYWARYVETLVK 271
YP+ W ++ L++
Sbjct: 256 NYPKSEWYKFSYNLLQ 271
>gi|170744725|ref|YP_001773380.1| putative lipoprotein [Methylobacterium sp. 4-46]
gi|168198999|gb|ACA20946.1| putative lipoprotein [Methylobacterium sp. 4-46]
Length = 298
Score = 129 bits (322), Expect = 5e-28, Method: Composition-based stats.
Identities = 71/227 (31%), Positives = 132/227 (58%)
Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
+ Y V + R ++Y + + L++ ++ +A + F +++ ++ +RK++LM+A+
Sbjct: 42 EKYKPEVIERRPADKIYSEGLAKLEDHDYDEAVKRFQNLDKEYAYSDWSRKAVLMTAYAN 101
Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
Y KY+ A + + Y+ ++P SK+ Y Y++ MS+ + I DV DQ ++ L +
Sbjct: 102 YEGAKYEDAITAAKRYLQRHPGSKDAAYAQYILAMSHYKQIPDVTRDQERSERALAALQE 161
Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
+V++Y S Y A+ + + R+QLA KE+ +GRYYL R + AAI RF+ V++ Y
Sbjct: 162 LVQKYPTSEYAADAKAKIQITRDQLAGKEMTVGRYYLDRRNFPAAINRFREVVSKYQTTR 221
Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
HAEEA+ RL EAY+AL ++ EA+ +++ +P W + L++
Sbjct: 222 HAEEALERLAEAYMALGIVAEAQTAAAVLAHNFPDSPWYKDAYALLQ 268
>gi|114705261|ref|ZP_01438169.1| hypothetical protein FP2506_09991 [Fulvimarina pelagi HTCC2506]
gi|114540046|gb|EAU43166.1| hypothetical protein FP2506_09991 [Fulvimarina pelagi HTCC2506]
Length = 265
Score = 129 bits (322), Expect = 5e-28, Method: Composition-based stats.
Identities = 82/253 (32%), Positives = 134/253 (52%), Gaps = 1/253 (0%)
Query: 19 LYKFALTIFFSIAVCFLVGW-ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
+ K +LT+ + G S L +Y + + L+ N +A
Sbjct: 9 MRKASLTVLVAATAGLASGCMSDGGSDVDVLALAAQTERPEVLYNQGLANLEGGNLGEAS 68
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
F R P+ ARK+L+M AF Y +G Y++A + + Y++ YP +++ Y Y++
Sbjct: 69 AKFKAIDRQHPYTDWARKALVMGAFTSYRSGAYEEAINSSKRYLSLYPGTEDAAYAQYIM 128
Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
G+SY + I D+ DQ A Q M +++ Y +S YV A+ + + R+QLA KE+++G
Sbjct: 129 GLSYWRQIPDITRDQTAAGRTAQAMRGVIDNYPDSEYVPDAQTKLRIARDQLAGKELQVG 188
Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
RYY +R EYVAAI RF+ V+ Y + EEA+ARL E Y+A+ L+ EA+ S++ + Y
Sbjct: 189 RYYQERNEYVAAINRFKNVVDVYPETRQVEEALARLTETYLAMGLVREAQASASVLGQNY 248
Query: 258 PQGYWARYVETLV 270
P W + L+
Sbjct: 249 PDSQWYQDSYALL 261
Score = 36.3 bits (81), Expect = 4.7, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 28/83 (33%), Gaps = 8/83 (9%)
Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA----LALMDEAR----E 248
+ G Y AI + L+ Y E A A + +Y + A +
Sbjct: 92 AFTSYRSGAYEEAINSSKRYLSLYPGTEDAAYAQYIMGLSYWRQIPDITRDQTAAGRTAQ 151
Query: 249 VVSLIQERYPQGYWARYVETLVK 271
+ + + YP + +T ++
Sbjct: 152 AMRGVIDNYPDSEYVPDAQTKLR 174
>gi|325293455|ref|YP_004279319.1| lipoprotein [Agrobacterium sp. H13-3]
gi|325061308|gb|ADY64999.1| lipoprotein [Agrobacterium sp. H13-3]
Length = 288
Score = 129 bits (322), Expect = 6e-28, Method: Composition-based stats.
Identities = 77/253 (30%), Positives = 135/253 (53%), Gaps = 1/253 (0%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ A+++ A + + + +Y++ + + N ++A
Sbjct: 13 MRGIAVSLMLVGASVAVTACQSDPD-IDITKLGVETDPPDVLYKQGLANMNAGNMTEASR 71
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
F + +PF +K+L+M F+ K A + G ++ QYP SK+ YV Y++G
Sbjct: 72 KFEAIDKQYPFTEWGQKALVMQTFIATRTNKNDVAIASGSRFLRQYPRSKDAAYVQYMIG 131
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
++Y++ I DV DQRA + ++ MS++V Y +S YV A+ + R+QLA +E+++GR
Sbjct: 132 LAYSKQISDVTQDQRAAQRTVEAMSKVVNDYPDSEYVADAQAKIRFARDQLAGREMQVGR 191
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
YYL+R EY+AA+ RF++V+ Y + EEA+ARL E+Y A+ L DEA+ +++ YP
Sbjct: 192 YYLERKEYLAAVSRFRIVVEQYQNTNQIEEALARLTESYYAMGLSDEAQTAAAVLGNNYP 251
Query: 259 QGYWARYVETLVK 271
W L+K
Sbjct: 252 DSQWYADSYKLLK 264
>gi|188582377|ref|YP_001925822.1| lipoprotein [Methylobacterium populi BJ001]
gi|179345875|gb|ACB81287.1| putative lipoprotein [Methylobacterium populi BJ001]
Length = 291
Score = 129 bits (322), Expect = 6e-28, Method: Composition-based stats.
Identities = 71/227 (31%), Positives = 127/227 (55%)
Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
+ Y ++Y + + ++++++ A + F Q + + ++ +RK LLM+A+
Sbjct: 36 EKYKPEAVPDTPADKLYSEGLAKMEDKDYENAAKQFEQLDKQYTYSDWSRKGLLMTAYAN 95
Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
Y KY A + + Y+ ++P SK+ Y YL+ MS + I DV DQ ++ L +
Sbjct: 96 YEGAKYDDAINASKRYLQRHPASKDAAYAQYLMAMSQYKQIPDVTRDQERSERALVALQE 155
Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
+V++Y S Y A+ + + R+QLA KE+ +GR+YL++ + AAI RF+ V++ Y
Sbjct: 156 LVQKYPTSEYAADAKAKIQITRDQLAGKEMAVGRFYLEKRAFPAAINRFRDVVSKYQTTR 215
Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
HAEEA+ RLVEAY+AL L EA+ +++ +P W + L++
Sbjct: 216 HAEEALERLVEAYMALGLTAEAQTAAAVLGHNFPDSPWYQDAYKLLQ 262
>gi|328542974|ref|YP_004303083.1| DNA uptake lipoprotein-like protein [polymorphum gilvum
SL003B-26A1]
gi|326412720|gb|ADZ69783.1| DNA uptake lipoprotein-like protein [Polymorphum gilvum
SL003B-26A1]
Length = 286
Score = 128 bits (321), Expect = 6e-28, Method: Composition-based stats.
Identities = 80/249 (32%), Positives = 131/249 (52%), Gaps = 5/249 (2%)
Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
L ++ L D D ++ + + S A + F++
Sbjct: 19 LLRSLVLVSALALGACASDKD-----DLALDDTPAEVLFNEGLALRNAGRLSDAGKKFSE 73
Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
+ +P++ ARKSL+ AF+ +S G+Y +A + E + T YP S++ Y Y++G SY
Sbjct: 74 LDKLYPYSEYARKSLINLAFINFSLGRYPEAIAASERFTTLYPGSEDSAYALYIIGQSYF 133
Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
+ I DV DQ T+ L ++ ++ RY +S Y A+ V V +QLA KE+++GRYYL
Sbjct: 134 RQIPDVTRDQEQTEKALSALNELIRRYPDSEYTADAKSKVLVAYDQLAGKEMQVGRYYLD 193
Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
R Y+AAI RF++V+ NY H EEA+ RL E+Y AL +++EA+ +++ YP W
Sbjct: 194 RRNYIAAINRFKMVVINYQTTRHVEEALFRLTESYYALGVVNEAQTAAAVLGHNYPDSRW 253
Query: 263 ARYVETLVK 271
+ L+K
Sbjct: 254 YKDAFALLK 262
>gi|103486038|ref|YP_615599.1| DNA uptake lipoprotein [Sphingopyxis alaskensis RB2256]
gi|98976115|gb|ABF52266.1| DNA uptake lipoprotein [Sphingopyxis alaskensis RB2256]
Length = 264
Score = 128 bits (321), Expect = 7e-28, Method: Composition-based stats.
Identities = 73/243 (30%), Positives = 120/243 (49%), Gaps = 2/243 (0%)
Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
+ L D+ R +Y A L + A F++ R P
Sbjct: 18 FVITPMLAACAGGGGVKQ--DTRYVARDVNTLYRAAQERLDRGQYGIAAALFDEVERQHP 75
Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
++ AR++ LMS+F Y +Y A + ++ +P +K+ Y YYL+ +SY + I DV
Sbjct: 76 YSPWARRAQLMSSFSYYMDREYTPAIEAAQRFLAIHPGNKDAPYAYYLIALSYYEQISDV 135
Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
DQR T+ + IV RY +S Y AR + + ++ LA KE+EIGR+Y + ++A
Sbjct: 136 TRDQRITQQAQAALGEIVRRYPDSRYAADARLKLDLVQDHLAGKEMEIGRFYQRSSNWLA 195
Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
A RF+ V+ Y HA EA+ RL E+Y+AL + +EA++ +++ YP W
Sbjct: 196 ASIRFREVVDKYQTTSHAPEALYRLTESYLALGIPEEAKKSAAVLGANYPGNEWYERAYK 255
Query: 269 LVK 271
L++
Sbjct: 256 LMQ 258
>gi|300021786|ref|YP_003754397.1| outer membrane assembly lipoprotein YfiO [Hyphomicrobium
denitrificans ATCC 51888]
gi|299523607|gb|ADJ22076.1| outer membrane assembly lipoprotein YfiO [Hyphomicrobium
denitrificans ATCC 51888]
Length = 309
Score = 128 bits (320), Expect = 8e-28, Method: Composition-based stats.
Identities = 70/234 (29%), Positives = 123/234 (52%), Gaps = 4/234 (1%)
Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
L+ +++ A + +F A + F R+ P++ ARKS+
Sbjct: 51 CASNKLDTSALN----PDPPSKMFANADAKMSSGSFDDAAKQFEAVDREHPYSPEARKSI 106
Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
+M+A+ Y AGK +A + E Y+ +P +K ++++ MSY ++ DQ A +
Sbjct: 107 VMAAYAYYRAGKTPEAIASAERYVALHPGTKEAPMAHHIIAMSYFDDLKTANRDQTAARK 166
Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
L+ + R+ S Y + A + + + LAA+E+E+GRYYL + YVAAI RF+ V+
Sbjct: 167 ALEQFKILRTRFPESEYSRDADNKIRICMDNLAAQEMEVGRYYLNQHNYVAAINRFKTVV 226
Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
++Y H EEA+ARLVE+Y+AL ++ EA+ +++ YP W + L++
Sbjct: 227 SDYQTTAHVEEALARLVESYMALGVVTEAQNAAAILGHNYPDSKWYKDSYALLQ 280
>gi|329115585|ref|ZP_08244307.1| UPF0169 lipoprotein [Acetobacter pomorum DM001]
gi|326695013|gb|EGE46732.1| UPF0169 lipoprotein [Acetobacter pomorum DM001]
Length = 345
Score = 128 bits (320), Expect = 9e-28, Method: Composition-based stats.
Identities = 68/251 (27%), Positives = 121/251 (48%)
Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
QL + L S+A+ + + + L + +Y + L+ + ++ A
Sbjct: 9 QLLRHVLPHVLSVALLTSLAGCGLFNENKKLPPAPKIAAPETLYNNGIDALRTRRYALAA 68
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
F +++P++G + LM + Y GKY +A +I+ +P S + Y YYL
Sbjct: 69 SEFETLQQNYPYSGYIANAQLMEGYAYYLKGKYPEAVQQLNRFISLHPTSSDSAYAYYLR 128
Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
+ + + I DV DQ+ T + + ++ R+ S Y + A+ + + R+ LA KE+ +G
Sbjct: 129 ALCFYEQIADVQRDQQGTAESMDALEEVITRFPQSKYARDAQLKIDLCRDHLAGKEMLVG 188
Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
RYY + Y AI R+Q V+ ++ H EA+ R+VE Y+ L L D+AR+ ++ Y
Sbjct: 189 RYYQREKNYEGAINRYQRVVQDFQTTNHVPEALERMVEVYLDLGLTDQARKSAIVLGYNY 248
Query: 258 PQGYWARYVET 268
P W RY
Sbjct: 249 PGSKWYRYAYD 259
>gi|163852368|ref|YP_001640411.1| putative lipoprotein [Methylobacterium extorquens PA1]
gi|163663973|gb|ABY31340.1| putative lipoprotein [Methylobacterium extorquens PA1]
Length = 291
Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats.
Identities = 72/227 (31%), Positives = 129/227 (56%)
Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
+ Y ++Y + + ++++++ A + F+Q + + ++ +RK LLM+A+
Sbjct: 36 EKYKPEAIPDTPADKLYSEGLAKMEDRDYENAAKQFDQLDKQYTYSDWSRKGLLMTAYAN 95
Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
Y KY A + + Y+ ++P SK+ Y YL+ MS + I DV DQ ++ L +
Sbjct: 96 YEGAKYDDAINASKRYLQRHPASKDAAYAQYLMAMSQYKQIPDVTRDQERSERALIALQE 155
Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
+V++Y S Y A+ + + R+QLA KE+E+GR+YL++ + AAI RF+ V++ Y
Sbjct: 156 LVQKYPTSEYAADAKAKIQITRDQLAGKEMEVGRFYLEKRAFPAAINRFRDVVSKYQTTR 215
Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
HAEEA+ RLVEAY+AL L EA+ +++ +P W + L++
Sbjct: 216 HAEEALERLVEAYMALGLTGEAQTAAAVLGHNFPDSPWYQDAYKLLQ 262
>gi|218531128|ref|YP_002421944.1| outer membrane assembly lipoprotein YfiO [Methylobacterium
chloromethanicum CM4]
gi|254562116|ref|YP_003069211.1| lipoprotein UPF0169; exported protein [Methylobacterium extorquens
DM4]
gi|218523431|gb|ACK84016.1| outer membrane assembly lipoprotein YfiO [Methylobacterium
chloromethanicum CM4]
gi|254269394|emb|CAX25360.1| putative lipoprotein UPF0169; putative exported protein
[Methylobacterium extorquens DM4]
Length = 291
Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats.
Identities = 72/227 (31%), Positives = 129/227 (56%)
Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
+ Y ++Y + + ++++++ A + F+Q + + ++ +RK LLM+A+
Sbjct: 36 EKYKPEAIPDTPADKLYSEGLAKMEDRDYENAAKQFDQLDKQYTYSDWSRKGLLMTAYAN 95
Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
Y KY A + + Y+ ++P SK+ Y YL+ MS + I DV DQ ++ L +
Sbjct: 96 YEGAKYDDAINASKRYLQRHPASKDAAYAQYLMAMSQYKQIPDVTRDQERSERALIALQE 155
Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
+V++Y S Y A+ + + R+QLA KE+E+GR+YL++ + AAI RF+ V++ Y
Sbjct: 156 LVQKYPTSEYAADAKAKIQITRDQLAGKEMEVGRFYLEKRAFPAAINRFRDVVSKYQTTR 215
Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
HAEEA+ RLVEAY+AL L EA+ +++ +P W + L++
Sbjct: 216 HAEEALERLVEAYMALGLTGEAQTAAAVLGHNFPDSPWYQDAYKLLQ 262
>gi|307944886|ref|ZP_07660223.1| lipoprotein [Roseibium sp. TrichSKD4]
gi|307771810|gb|EFO31034.1| lipoprotein [Roseibium sp. TrichSKD4]
Length = 288
Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats.
Identities = 72/247 (29%), Positives = 125/247 (50%), Gaps = 3/247 (1%)
Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
L I L + + D +Y + + + A F Q
Sbjct: 20 LKIMALTIPLGLAACSSTKDTEDF---ALDDTPPEVLYNEGLALRAQGKLKDADAKFQQL 76
Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
+ +P++ A+KSL+ A++ YS GKY +A + + ++T YP + + Y Y++G SY +
Sbjct: 77 DKLYPYSEYAKKSLVNMAYINYSRGKYPEAINAAQRFVTLYPGNDDSAYALYIIGQSYFK 136
Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
+ D+ DQ T+ S +++RY +S Y A + ++QLA KE+++GRYYLK+
Sbjct: 137 QMPDISRDQAVTRKAASAYSELLQRYPDSEYSPDAETKLIAVKDQLAGKEMQVGRYYLKK 196
Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
Y+A I RF+ V+ Y H EEA+ RL EAY AL +++EA+ +++ +P W
Sbjct: 197 RNYIAGINRFKTVVLQYQTTRHVEEALFRLTEAYFALGVVNEAQTAAAVLGHNFPDTQWY 256
Query: 264 RYVETLV 270
+ +L+
Sbjct: 257 KDAYSLL 263
>gi|296445566|ref|ZP_06887522.1| outer membrane assembly lipoprotein YfiO [Methylosinus
trichosporium OB3b]
gi|296256971|gb|EFH04042.1| outer membrane assembly lipoprotein YfiO [Methylosinus
trichosporium OB3b]
Length = 292
Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats.
Identities = 79/226 (34%), Positives = 125/226 (55%)
Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
+ Y + ++Y +A+ L+ +++ A + F + + +PF+ ARK LLM F Q
Sbjct: 42 EKYKTELLPDIPAEDIYNQALAKLEAKDYETAAKKFGELEKQYPFSHWARKGLLMQTFAQ 101
Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
YS Y A + + YI YP S Y+YYL GMSY + V DQ + L ++
Sbjct: 102 YSKPSYDDAVASAQRYIGLYPTSPETPYMYYLAGMSYYNQVPGVMQDQETAQKALVIFNQ 161
Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
+VE++ S YV ++ + V R+QLAAK++ +GR+YL R Y AA+ RF VLA Y
Sbjct: 162 LVEKFPKSEYVADVKYKIQVARDQLAAKDMSVGRFYLTRKNYPAAVNRFHDVLAKYQTTR 221
Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
HAEEA+ RL EAY A+ +++EA+ +++ +P W + L+
Sbjct: 222 HAEEALYRLTEAYFAMGIVNEAQTAAAILGHNFPDSQWYKDAHELL 267
>gi|240139704|ref|YP_002964181.1| putative lipoprotein UPF0169; putative exported protein
[Methylobacterium extorquens AM1]
gi|240009678|gb|ACS40904.1| putative lipoprotein UPF0169; putative exported protein
[Methylobacterium extorquens AM1]
Length = 291
Score = 127 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 72/227 (31%), Positives = 129/227 (56%)
Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
+ Y ++Y + + ++++++ A + F+Q + + ++ +RK LLM+A+
Sbjct: 36 EKYKPEAIPDTPADKLYSEGLAKMEDRDYENAAKQFDQLDKQYTYSDWSRKGLLMAAYAN 95
Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
Y KY A + + Y+ ++P SK+ Y YL+ MS + I DV DQ ++ L +
Sbjct: 96 YEGAKYDDAINASKRYLQRHPASKDAAYAQYLMAMSQYKQIPDVTRDQERSERALIALQE 155
Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
+V++Y S Y A+ + + R+QLA KE+E+GR+YL++ + AAI RF+ V++ Y
Sbjct: 156 LVQKYPTSEYAADAKAKIQITRDQLAGKEMEVGRFYLEKRAFPAAINRFRDVVSKYQTTR 215
Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
HAEEA+ RLVEAY+AL L EA+ +++ +P W + L++
Sbjct: 216 HAEEALERLVEAYMALGLTGEAQTAAAVLGHNFPDSPWYQDAYKLLQ 262
>gi|297717818|gb|ADI50052.1| DNA uptake lipoprotein [Candidatus Odyssella thessalonicensis L13]
Length = 278
Score = 127 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 67/235 (28%), Positives = 124/235 (52%), Gaps = 6/235 (2%)
Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
+ + + ++Y A + +++ A + F + R P++ + K
Sbjct: 18 ISCSEKD------EEALAQMPVEQLYNMAKDQMDSGSYNTAAKTFAEVERQHPYSEWSLK 71
Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
+ LMSA+ Y A KY +A +I +P +++ Y YY+VG+SY + I V DQ T
Sbjct: 72 AQLMSAYCYYEAKKYTEAIEGYNVFIQLHPGHEHIPYAYYMVGLSYYEQIPTVHRDQTVT 131
Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
+ + ++ R+ +SPY K A+F + + R+ LA KE+++GRYYL++ Y+AA+ RF+
Sbjct: 132 EKAQEAFQEVINRFPDSPYAKDAKFKMDLLRDHLAGKEMDVGRYYLRQRSYLAAVNRFKE 191
Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
V+ + H EA+ R+VE Y+AL L+++A + +++ +P W L+
Sbjct: 192 VVDRFQTTSHVPEALHRMVECYLALGLVEQAYQTAAILGHNFPGSLWYADTYALM 246
>gi|302383769|ref|YP_003819592.1| outer membrane assembly lipoprotein YfiO [Brevundimonas
subvibrioides ATCC 15264]
gi|302194397|gb|ADL01969.1| outer membrane assembly lipoprotein YfiO [Brevundimonas
subvibrioides ATCC 15264]
Length = 286
Score = 127 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 70/254 (27%), Positives = 117/254 (46%), Gaps = 5/254 (1%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
L + L + + L + R R +Y L+ +S A +
Sbjct: 11 LRRGGLILMAAAVTLTLPACGGGAGRPRLAYE---ERPVELLYNTGYTRLQSNRWSDAVD 67
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
YF + R P++ +R+++LM + Y G Y+++ + + +I+ +P S + Y +Y+
Sbjct: 68 YFQEVERQHPYSEWSRRAILMQVYAHYQNGSYEESIAAADRFISLFPGSPSAAYAFYMRA 127
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
+ + I DV DQ + L + + RY S Y A + + +QLA KE+ IGR
Sbjct: 128 TCHFEQIVDVGRDQNQAQQALDGLRDVARRYPGSSYATDATVKIDMVNDQLAGKEMSIGR 187
Query: 199 YYLKRGEYVAAIPRFQLVLAN--YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
YY + +AAI R++ V+ N Y H EA+ RLVE Y++L L DEA S++
Sbjct: 188 YYQRANLPLAAIGRYKAVIDNEAYQRTSHTPEALYRLVEVYLSLGLKDEAERNGSVLGFN 247
Query: 257 YPQGYWARYVETLV 270
YP W L+
Sbjct: 248 YPGSPWYSQAYALL 261
>gi|85708862|ref|ZP_01039928.1| DNA uptake lipoprotein [Erythrobacter sp. NAP1]
gi|85690396|gb|EAQ30399.1| DNA uptake lipoprotein [Erythrobacter sp. NAP1]
Length = 266
Score = 127 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 71/250 (28%), Positives = 119/250 (47%), Gaps = 3/250 (1%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
+ + L S+ + D +Y +A L N + A F
Sbjct: 10 RLTRAVLIGAGFATLAACGGGSAEEDVAYVARD---VESLYAEAQRRLDRGNTTLAAALF 66
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
++ R P++ AR++ LMSAF Y A Y +A + +++ +P +K+ Y YYL+ +S
Sbjct: 67 DEVERQHPYSPWARRAQLMSAFCYYIARDYNKAIQNSQRFLSIHPGNKDAPYAYYLIALS 126
Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
Y + I DV DQ T+ + + R+ + Y AR + + + LA KE+EIGR+Y
Sbjct: 127 YYEQISDVNRDQSITEQAQIALREVNRRFPQTEYAADARLKLDLVADHLAGKEMEIGRFY 186
Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
+ G ++AA RF+ V+ Y H EA+ RL E+ +AL + +EA + +++ YP
Sbjct: 187 QRSGRWLAAQLRFRNVVETYETTSHTPEALYRLTESSLALGIREEAVKYAAVLGANYPGT 246
Query: 261 YWARYVETLV 270
W LV
Sbjct: 247 EWYDKAYELV 256
>gi|148257409|ref|YP_001241994.1| hypothetical protein BBta_6164 [Bradyrhizobium sp. BTAi1]
gi|146409582|gb|ABQ38088.1| hypothetical protein BBta_6164 [Bradyrhizobium sp. BTAi1]
Length = 297
Score = 127 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 73/238 (30%), Positives = 122/238 (51%), Gaps = 3/238 (1%)
Query: 37 GWERQS--SRDVYLDSVTDVRYQREVYEKAVLFLK-EQNFSKAYEYFNQCSRDFPFAGVA 93
G + + D ++Y + + + +++ A + F + R P++ A
Sbjct: 36 GCGTGGLWDKFLAKDDTFVDEPADKLYNEGLYLMNEKKDVKGATKKFEEVDRQHPYSDWA 95
Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153
RKSLLMSA+ Y AG Y Y+T +P S + Y YL+ S+ I D+ DQ
Sbjct: 96 RKSLLMSAYASYQAGDYDGCIGAATRYVTLHPGSPDAAYAQYLIAASHYDQIPDISRDQG 155
Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213
T+ + + +V +Y NS Y A+ + R+QLA KE+++GRYY+++ +Y AAI RF
Sbjct: 156 RTEKAIAALEEVVRKYPNSEYATNAKAKMEGARDQLAGKEMDVGRYYMQKRDYTAAINRF 215
Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+ V+ Y H EEA+ RL EAY+ + ++ EA+ +++ +P W + LVK
Sbjct: 216 KAVVTQYQTTRHVEEALYRLTEAYMTIGIVGEAQTAAAVLGHNFPDSKWYKDAYNLVK 273
>gi|85374273|ref|YP_458335.1| DNA uptake lipoprotein [Erythrobacter litoralis HTCC2594]
gi|84787356|gb|ABC63538.1| DNA uptake lipoprotein [Erythrobacter litoralis HTCC2594]
Length = 266
Score = 127 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 70/224 (31%), Positives = 117/224 (52%)
Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106
D+ R +Y A L N A F++ R P++ AR++ LMSAF Y
Sbjct: 33 ERDTAYVARDVETLYASAKDRLDRGNAKLAAALFDEVERQHPYSPWARRAQLMSAFSYYV 92
Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
+ Y +A + +++ +P +K+ Y YYL+ +SY + I DV DQ+ T+ L + +
Sbjct: 93 SRDYTKAIQSAQRFLSIHPGNKDAPYAYYLIALSYYEQISDVQRDQKVTEQALTALREVD 152
Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
R+ + Y AR + + + LA KE+EIGR+Y + ++ AA+ RFQ V+ +Y HA
Sbjct: 153 RRFPQTEYAADARLKMDLVNDHLAGKEMEIGRFYQRTAKWAAAVIRFQNVVDDYQTTSHA 212
Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
EA+ RL E+ +AL + EA++ +++ YP W L+
Sbjct: 213 PEALYRLTESNLALGIPTEAKKYAAVLGANYPGSEWYEKAYELI 256
>gi|329890234|ref|ZP_08268577.1| competence lipoprotein comL [Brevundimonas diminuta ATCC 11568]
gi|328845535|gb|EGF95099.1| competence lipoprotein comL [Brevundimonas diminuta ATCC 11568]
Length = 287
Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 63/251 (25%), Positives = 114/251 (45%), Gaps = 5/251 (1%)
Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
+ ++A L R R +Y L+ + + A +YF +
Sbjct: 14 LTLLTVAVAALSLSACAGNKPRQKLAYE---ERPVEALYNTGYQRLQSKRWMDAVDYFQE 70
Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
R P++ AR+++LM + Y YQ A + + +I +P + + Y +Y+ +
Sbjct: 71 VERQHPYSEWARRAILMQVYAYYQNNNYQDAIAAADRFIALFPGNPSASYAFYMKAVCNF 130
Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
+ I DV DQ + L + +V RY S Y AR + + +QLA KE+ +GRYY +
Sbjct: 131 EQIVDVGRDQGYAEAALAGLRDVVRRYPGSSYATDARVKIDMVNDQLAGKEMTVGRYYQR 190
Query: 203 RGEYVAAIPRFQLVLA--NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
+ + A+ R++ V+ ++ H EA+ RLVE ++L L +EA +++ YP
Sbjct: 191 ANQPLGALNRYKAVINNPDFQRTSHTPEALYRLVEVNLSLGLTEEATRNAAVLGHNYPGS 250
Query: 261 YWARYVETLVK 271
W L++
Sbjct: 251 PWYAEAFALLR 261
>gi|326387607|ref|ZP_08209213.1| DNA uptake lipoprotein [Novosphingobium nitrogenifigens DSM 19370]
gi|326207653|gb|EGD58464.1| DNA uptake lipoprotein [Novosphingobium nitrogenifigens DSM 19370]
Length = 268
Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 70/239 (29%), Positives = 124/239 (51%), Gaps = 2/239 (0%)
Query: 32 VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91
L G + + V R +Y A L L + + A F++ R P++
Sbjct: 22 SIGLAGCAGGNKTKKDVAYVA--RDVDTLYMAAKLRLDQGDAKAAAALFDEVERQHPYSP 79
Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151
AR++ LMS+F Y A Y ++ + +++ +P +K+ Y YYLV + Y + I DV D
Sbjct: 80 WARRAQLMSSFSYYMARDYAKSIQAAQRFLSIHPGNKDAPYAYYLVALCYYERISDVTRD 139
Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
Q+ T+ LQ ++ ++ RY + Y A+ + + + LA KE+E+GR+Y + G+++A
Sbjct: 140 QKDTQQALQALNEVIRRYPATTYATDAKVKLDLVNDHLAGKEMEVGRFYERSGKWLAGTM 199
Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
RF+ V+ Y H EA+ RLVE Y++L + +EA++ +++ YP W L+
Sbjct: 200 RFRAVVDKYQQTSHTPEALYRLVECYLSLGIPEEAQKAAAVLGNNYPGNEWYERAFKLM 258
>gi|209884392|ref|YP_002288249.1| coml, competence lipoprotein [Oligotropha carboxidovorans OM5]
gi|209872588|gb|ACI92384.1| coml, competence lipoprotein [Oligotropha carboxidovorans OM5]
Length = 281
Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats.
Identities = 77/251 (30%), Positives = 130/251 (51%), Gaps = 3/251 (1%)
Query: 24 LTIFFSIAVCFLVGWERQS--SRDVYLDSVTDVRYQREVYEKAVLFLK-EQNFSKAYEYF 80
L + L G + + D + ++Y + + L +++ A + F
Sbjct: 7 LALGVITLAAPLGGCGTGNLWDKFFAKDETFVDQPADKLYNEGLYLLNEKKDRKGALKKF 66
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
+ R P++ ARKSLLMSA+ Y +G Y + + YI+ +P S + Y YLV +S
Sbjct: 67 EEVDRQHPYSDWARKSLLMSAYAAYESGDYDECIASANRYISLHPGSPDAAYAQYLVAVS 126
Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
+ I DV DQ T+ + + +V +Y NS Y A+ + R+QLA +E+ IGRYY
Sbjct: 127 HYDQIPDVSRDQTRTEKAIASLEEVVRKYPNSEYATTAKKKIEGARDQLAGREMTIGRYY 186
Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
+++ +Y AI RF++V+ Y H EEA+ARL EAY+A+ ++ EA+ +++ +P
Sbjct: 187 MEKRDYTGAINRFKVVVTQYQTTRHVEEALARLTEAYMAIGVVSEAQTAAAVLGHNFPDS 246
Query: 261 YWARYVETLVK 271
W + LV+
Sbjct: 247 RWYKDAYNLVR 257
>gi|294011614|ref|YP_003545074.1| putative lipoprotein [Sphingobium japonicum UT26S]
gi|292674944|dbj|BAI96462.1| putative lipoprotein [Sphingobium japonicum UT26S]
Length = 261
Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats.
Identities = 67/233 (28%), Positives = 120/233 (51%)
Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
++ D+ R +Y L + A F++ R P++ AR++ L
Sbjct: 23 SGCATSKNKADTQYVARDVSTLYNAGKYRLDRGQYKLAAALFDEVERQHPYSPWARRAQL 82
Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
MSAF Y Y ++ + +++ + +K+ Y YYL+ + Y + I DV DQ+ T+
Sbjct: 83 MSAFSYYMNQDYPESIGAAQRFLSIHTGNKDAPYAYYLIALCYYEQIADVTRDQKITQQA 142
Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
L + ++ RY ++ Y AR + + + LA KE+EIGR+Y +RG+++AA RF+ V+
Sbjct: 143 LDALGELIRRYPDTRYAADARLKLDLVNDHLAGKEMEIGRFYQRRGQWLAATLRFRTVID 202
Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
Y H EA+ RLVE+Y++L + EA++ +++ YP W L++
Sbjct: 203 KYQTTTHTPEALERLVESYLSLGIPAEAQKAAAVLGRNYPGSKWYERSYKLMR 255
>gi|163868705|ref|YP_001609917.1| competence lipoprotein precursor [Bartonella tribocorum CIP 105476]
gi|161018364|emb|CAK01922.1| competence lipoprotein precursor [Bartonella tribocorum CIP 105476]
Length = 297
Score = 126 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 88/271 (32%), Positives = 138/271 (50%), Gaps = 4/271 (1%)
Query: 5 LGRAICIFEAWAY---QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDV-RYQREV 60
+ ++ AY + + L + + C L G + + + +
Sbjct: 1 MKKSHVYIRNMAYRKSNIVRKILGVMLLGSTCMLAGCLFKEKNTLDPSAYVLKIDPPDVL 60
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
Y + + L+ + A + F + + + + RKSL+M AF Y GKY + S+ + Y
Sbjct: 61 YNQGLASLESGRLADAAKKFLKIEKQYAYTDWGRKSLVMGAFTNYRLGKYDDSISMAQRY 120
Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
IT YP S + Y YY++G+S + I DV DQR TK + M ++ERY NS YVK A+
Sbjct: 121 ITLYPGSTDSAYAYYIIGLSSFRRIPDVTRDQRDTKRAIAAMQLLIERYPNSEYVKDAKD 180
Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
+ GR QLA KE++IGRYY + Y+AA RF+ V+ YSD EEA+ RL E +AL
Sbjct: 181 KIRFGREQLAGKEMQIGRYYEEGRRYLAASRRFRTVVEEYSDTNQIEEALFRLTEVNLAL 240
Query: 241 ALMDEAREVVSLIQERYPQGYWARYVETLVK 271
L EA+ +++ YPQ W ++ L++
Sbjct: 241 GLTAEAQTAAAILGRNYPQSEWYKFSYNLLQ 271
>gi|83312955|ref|YP_423219.1| DNA uptake lipoprotein [Magnetospirillum magneticum AMB-1]
gi|82947796|dbj|BAE52660.1| DNA uptake lipoprotein [Magnetospirillum magneticum AMB-1]
Length = 304
Score = 126 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 73/226 (32%), Positives = 119/226 (52%)
Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
R E+Y +A+ + + KA + F++ R P++ A K+ LMSA+ Y
Sbjct: 28 SEKKPEYVERPVEELYNEAMDLVDANEYYKAAQLFDEVDRQHPYSVWATKAQLMSAYALY 87
Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
KY A + +I +P +K++ Y YYL G+ Y + I DV DQ+ T+ L+ M +
Sbjct: 88 ERNKYDDAIVALDRFIQLHPGNKSIAYGYYLKGLCYYEQITDVARDQKLTEQALKIMQEV 147
Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
V+R+ ++PY + AR + + R+ LA KE+ IGRYY ++AA+ RF++V Y H
Sbjct: 148 VDRFPSTPYARDARLKIDLARDHLAGKEMNIGRYYQHLEHHLAALNRFKVVAEQYQTTTH 207
Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
EA+ R+VE Y AL L EA +++ +P W +V+
Sbjct: 208 VPEALYRMVEIYTALGLDQEAARAAAVLGHNFPGSDWYEDAYAMVE 253
>gi|115524131|ref|YP_781042.1| putative lipoprotein [Rhodopseudomonas palustris BisA53]
gi|115518078|gb|ABJ06062.1| putative lipoprotein [Rhodopseudomonas palustris BisA53]
Length = 301
Score = 126 bits (314), Expect = 4e-27, Method: Composition-based stats.
Identities = 74/239 (30%), Positives = 123/239 (51%), Gaps = 3/239 (1%)
Query: 36 VGWERQS--SRDVYLDSVTDVRYQREVYEKAVLFLKE-QNFSKAYEYFNQCSRDFPFAGV 92
G + + + D ++Y + + + + ++ A + F + R P++
Sbjct: 39 TGCGTGAIWDKFLTKDETYTDEPADKLYNEGLYLMNQSKDPKAASKKFEEVDRQHPYSDW 98
Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
ARKSLLMSA+ Y AG Y Y+T +P S + Y YL+ S+ I D+ DQ
Sbjct: 99 ARKSLLMSAYAYYEAGDYDNCIGSATRYVTMHPGSADAAYAQYLIAASHYDQIPDISRDQ 158
Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
T+ + + ++ +Y S Y A+ + R+QLA KE+ +GRYY++R +Y AAI R
Sbjct: 159 GRTEKAMAALEEVIRKYPTSEYATTAKKKLEGARDQLAGKEMAVGRYYMERRDYTAAINR 218
Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
F+ V+ Y H EEA+ARL EAY+A+ ++ EA+ +++ +P W + LVK
Sbjct: 219 FKTVVTRYQTTRHVEEALARLTEAYMAIGIVGEAQTAAAVLGHNFPDSRWYKDAYNLVK 277
>gi|163794453|ref|ZP_02188424.1| DNA uptake lipoprotein [alpha proteobacterium BAL199]
gi|159180177|gb|EDP64700.1| DNA uptake lipoprotein [alpha proteobacterium BAL199]
Length = 286
Score = 126 bits (314), Expect = 4e-27, Method: Composition-based stats.
Identities = 77/224 (34%), Positives = 122/224 (54%)
Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
++ R ++Y +A + F KA F++ R P++ A ++ LM+A+ Y
Sbjct: 39 TDDETPYVDRPVEQIYNEAYEAALKGEFKKAAPLFDEVERQHPYSIWATQAQLMAAYSLY 98
Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
A KY ++ + + +I P + NVDY YYL G+ Y + I DV DQ+ TK L+ +
Sbjct: 99 QANKYTESVNALDRFIQLNPSNPNVDYAYYLKGLCYYEQIVDVGRDQKLTKQALESFDEV 158
Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
++R+ S + + AR + + RN LA KE+ IGR+YL+RG+++AAI RFQ V+ + +
Sbjct: 159 IKRFPTSKFARDARLKIDLTRNHLAGKEMAIGRWYLERGQHLAAINRFQKVVEQFDTTDQ 218
Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
EA+ RL EAY AL L EA+ S++ YP W L
Sbjct: 219 VPEALLRLTEAYTALGLTGEAKRTASVLGYNYPGTEWYEDAYAL 262
>gi|319405998|emb|CBI79629.1| competence lipoprotein precursor [Bartonella sp. AR 15-3]
Length = 297
Score = 126 bits (314), Expect = 5e-27, Method: Composition-based stats.
Identities = 83/254 (32%), Positives = 129/254 (50%), Gaps = 1/254 (0%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLD-SVTDVRYQREVYEKAVLFLKEQNFSKAY 77
+ + VCFL G + + V + +Y +A+ L S+A
Sbjct: 18 IVRKVFIGILLGGVCFLAGCLGKGKNILDPSVHVLKIDPPDVLYNQALANLDVGRLSEAA 77
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
+ F + + + RKSL+M AF Y KY A S+ + YI+ YP + + Y YY++
Sbjct: 78 KKFAVIEKQYAYTEWGRKSLIMGAFTNYRLAKYDDAISMAQHYISLYPLADDSAYAYYII 137
Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
G+S + I DV DQ+ TK + M ++ERY S YV A+ + GR QLA KE++IG
Sbjct: 138 GLSSFRRIPDVTRDQQDTKRAIAAMQILIERYPQSEYVSDAKAKIRFGREQLAGKEMQIG 197
Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
RYY + +Y+AA RF+ V+ Y D EEA+ RL E AL L EA+ +++ Y
Sbjct: 198 RYYEEGRQYLAASKRFRTVIEEYPDTNQIEEALFRLTEVNFALGLTMEAQTAAAILGRNY 257
Query: 258 PQGYWARYVETLVK 271
P+ W ++ L++
Sbjct: 258 PESKWYKFSYDLLQ 271
>gi|307293329|ref|ZP_07573175.1| outer membrane assembly lipoprotein YfiO [Sphingobium
chlorophenolicum L-1]
gi|306881395|gb|EFN12611.1| outer membrane assembly lipoprotein YfiO [Sphingobium
chlorophenolicum L-1]
Length = 261
Score = 125 bits (313), Expect = 5e-27, Method: Composition-based stats.
Identities = 67/233 (28%), Positives = 120/233 (51%)
Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
++ D+ R +Y L + A F++ R P++ AR++ L
Sbjct: 23 SGCATSKNKADTQYVARDVSTLYNAGKYRLDRGQYKLAAALFDEVERQHPYSPWARRAQL 82
Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
MSAF Y Y ++ + +++ + +K+ Y YYL+ + Y + I DV DQ+ T+
Sbjct: 83 MSAFSYYMNKDYPESIGASQRFLSIHTGNKDAPYAYYLIALCYYEQIADVTRDQKVTQQA 142
Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
L + ++ RY ++ Y AR + + + LA KE+EIGR+Y +RG+++AA RF+ V+
Sbjct: 143 LDALGELIRRYPDTRYAADARLKLDLVNDHLAGKEMEIGRFYQRRGQWLAATLRFRTVID 202
Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
Y H EA+ RLVE+Y++L + EA++ +++ YP W L++
Sbjct: 203 KYQTTTHTPEALERLVESYLSLGIPAEAQKAAAVLGRNYPGSKWYERSHKLMR 255
>gi|319407495|emb|CBI81143.1| competence lipoprotein precursor [Bartonella sp. 1-1C]
Length = 306
Score = 125 bits (313), Expect = 6e-27, Method: Composition-based stats.
Identities = 82/254 (32%), Positives = 128/254 (50%), Gaps = 1/254 (0%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLD-SVTDVRYQREVYEKAVLFLKEQNFSKAY 77
+ + L CFL G + + V + +Y +A+ L S+A
Sbjct: 27 IVRKVLIGVLLGGTCFLAGCLGKGKNILDPSMHVLKIDPPDVLYNQALANLDVGRLSEAA 86
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
+ F + + + RKSL+M AF Y KY A ++ + YI+ YP + + Y YY++
Sbjct: 87 KKFAIIEKQYAYTDWGRKSLIMGAFTNYRLAKYDDAIAMAQHYISLYPLADDSAYAYYII 146
Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
G+S + I DV DQ+ TK + M ++ERY S YV A+ + GR QLA KE++IG
Sbjct: 147 GLSSFRRIPDVTRDQQDTKRAIAAMQVLIERYPESEYVSDAKAKIRFGREQLAGKEMQIG 206
Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
RYY + Y+AA RF+ V+ Y D EEA+ RL E AL L EA+ +++ Y
Sbjct: 207 RYYEEGQRYLAASRRFRTVIEEYPDTNQIEEALFRLTEVNFALGLTMEAQTAAAILGRNY 266
Query: 258 PQGYWARYVETLVK 271
P+ W ++ L++
Sbjct: 267 PESKWYKFSYDLLQ 280
>gi|49474448|ref|YP_032490.1| competence lipoprotein comL precursor [Bartonella quintana str.
Toulouse]
gi|49239952|emb|CAF26357.1| Competence lipoprotein comL precursor [Bartonella quintana str.
Toulouse]
Length = 297
Score = 125 bits (312), Expect = 7e-27, Method: Composition-based stats.
Identities = 86/252 (34%), Positives = 131/252 (51%), Gaps = 1/252 (0%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDV-RYQREVYEKAVLFLKEQNFSKAYEY 79
+ L + + C L G + + + +Y +A+ L +A +
Sbjct: 20 RKLLGVVLLGSTCVLGGCLFKEKNTLDPSAYVLKIDPPDVLYNQALANLDSGRLGEASKK 79
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
F + + + RKSL+M AF Y KY +A S+ + YIT YP S + Y YY++G+
Sbjct: 80 FLTIEKQYAYTEWGRKSLVMGAFTNYQLAKYDEAISMAQRYITLYPGSDDSAYAYYIIGL 139
Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
S I DV DQR TK + M +VERY +S YVK A+ + +GR QLA KE+++GRY
Sbjct: 140 SSFCRIPDVTRDQRDTKRAIAAMQLLVERYPDSEYVKDAKAKIRIGREQLAGKEMQVGRY 199
Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
Y + Y+AA RF+ V+ YSD EEA+ RL E +AL L EA+ +++ YP+
Sbjct: 200 YEEGRRYLAASRRFRKVVEEYSDTNQIEEALFRLTEVNLALGLTAEAQTAAAILGRNYPK 259
Query: 260 GYWARYVETLVK 271
W ++ L+K
Sbjct: 260 SEWYKFSYNLLK 271
>gi|319404502|emb|CBI78107.1| competence lipoprotein precursor [Bartonella rochalimae ATCC
BAA-1498]
Length = 297
Score = 124 bits (311), Expect = 9e-27, Method: Composition-based stats.
Identities = 83/254 (32%), Positives = 128/254 (50%), Gaps = 1/254 (0%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLD-SVTDVRYQREVYEKAVLFLKEQNFSKAY 77
+ + L CFL G + + V + +Y +A+ L S+A
Sbjct: 18 IVRKVLIGVLLGGTCFLAGCLGKGKNILDPSMHVLKIDPPDVLYNQALANLDVGRLSEAA 77
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
+ F + + + RKSL+M AF Y KY A S+ + YI+ YP + + Y YY++
Sbjct: 78 KKFAIIEKQYAYTDWGRKSLIMGAFTNYRLAKYDDAISMAQHYISLYPLADDSAYAYYII 137
Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
G+S + I DV DQ+ TK + M ++ERY S YV A+ + GR QLA KE++IG
Sbjct: 138 GLSSFRRIPDVTRDQQDTKRAIAAMQVLIERYPESEYVSDAKAKIRFGREQLAGKEMQIG 197
Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
RYY + Y+AA RF+ V+ Y D EEA+ RL E AL L EA+ +++ Y
Sbjct: 198 RYYEEGQRYLAASRRFRTVIEEYPDTNQIEEALFRLTEVNFALGLTMEAQTAAAILGRNY 257
Query: 258 PQGYWARYVETLVK 271
P+ W ++ L++
Sbjct: 258 PESKWYKFSYDLLQ 271
>gi|110634349|ref|YP_674557.1| putative lipoprotein [Mesorhizobium sp. BNC1]
gi|110285333|gb|ABG63392.1| putative lipoprotein [Chelativorans sp. BNC1]
Length = 288
Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats.
Identities = 86/235 (36%), Positives = 137/235 (58%), Gaps = 1/235 (0%)
Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
G + D+ V +Y + + L +A F R P++ ARK+
Sbjct: 31 GCNAEKDLDLSTY-VEQTEPADVLYNQGLANLNAGRMREAIAKFEAVDRQHPYSEFARKA 89
Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
L+M+AF Y GKY +A + G+ Y+T YP S++ Y YLVG+SY + I+DV DQR +
Sbjct: 90 LIMNAFANYRQGKYTEAINAGKRYVTLYPTSEDAAYAQYLVGLSYFRQIKDVTQDQREAR 149
Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
L ++ M ++V+ + S YV A+ + R+QLA KE+++GRYYL+R EY+AA+ RF+ V
Sbjct: 150 LTIEAMQQVVDVWPESEYVTDAQAKIRFARDQLAGKEMQVGRYYLERREYIAAVRRFRGV 209
Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+ NY + H EEA+ARLVEAY+A+ + EA+ +++ +P W + TL++
Sbjct: 210 VENYGNTRHVEEALARLVEAYLAMGIASEAQTAAAVLGHNFPDSQWYKDSYTLLQ 264
>gi|85714984|ref|ZP_01045969.1| putative lipoprotein [Nitrobacter sp. Nb-311A]
gi|85698181|gb|EAQ36053.1| putative lipoprotein [Nitrobacter sp. Nb-311A]
Length = 298
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 72/242 (29%), Positives = 123/242 (50%), Gaps = 4/242 (1%)
Query: 33 CFLVGWERQS--SRDVYLDSVT-DVRYQREVYEKAVLFLKEQ-NFSKAYEYFNQCSRDFP 88
+ G + D T ++Y + + + ++ + A + F++ R+ P
Sbjct: 32 FTVAGCGTGPLLDKFTAKDEQTFSDEPADKLYNEGLFLMNKEHDLKAATKKFDEVDREHP 91
Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
++ ARKSLLMSA+ Y AG Y Y+T +P + + Y YL+ +S I DV
Sbjct: 92 YSEWARKSLLMSAYASYQAGDYDTCIGSASRYVTLHPGTPDAAYAQYLIAVSNYDQIPDV 151
Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
DQ T+ + + ++ +Y S Y A+ + R+QLA KE+ IGRYY++R +Y
Sbjct: 152 SRDQARTEKAMHALEEVIRKYPTSEYAGEAKKKLQGARDQLAGKEMAIGRYYMERRDYTG 211
Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
AI R++ V+ + H EEA+ARL EAY+A+ ++ EA+ +++ +P W +
Sbjct: 212 AINRYKTVVTRFQTTRHVEEALARLTEAYMAIGIVAEAQTAAAVLGHNFPDSRWYKDAYN 271
Query: 269 LV 270
LV
Sbjct: 272 LV 273
>gi|319899149|ref|YP_004159242.1| competence lipoprotein precursor [Bartonella clarridgeiae 73]
gi|319403113|emb|CBI76671.1| competence lipoprotein precursor [Bartonella clarridgeiae 73]
Length = 306
Score = 124 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 83/254 (32%), Positives = 129/254 (50%), Gaps = 1/254 (0%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLD-SVTDVRYQREVYEKAVLFLKEQNFSKAY 77
+ + L F C L G + + V + +Y +A+ L ++A
Sbjct: 27 IVRKVLIGIFLGGTCCLAGCLGKGKNVLDPSVHVLKIDPPDVLYNQALANLDAGRLNEAA 86
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
+ F + + + RK+L+M AF Y KY A S+ + YI+ YP + + Y YY++
Sbjct: 87 KKFAIIEKQYAYTEWGRKALVMGAFTNYRLAKYDDAISMAQHYISLYPLADDSAYAYYII 146
Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
G+S + I DV DQR TK + M ++ERY S YV A+ + GR QLA KE++IG
Sbjct: 147 GLSSFRRIPDVTRDQRDTKRAIAAMQLLIERYPQSEYVSDAKAKIRFGREQLAGKEMQIG 206
Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
RYY + +Y+AA RF+ V+ YSD EEA+ RL E AL L EA+ +++ Y
Sbjct: 207 RYYEEGQQYLAASRRFRTVIEEYSDTNQIEEALFRLTEVNFALGLTMEAQTAAAILGRNY 266
Query: 258 PQGYWARYVETLVK 271
P W ++ L++
Sbjct: 267 PGSKWYKFSYDLLQ 280
>gi|170748766|ref|YP_001755026.1| putative lipoprotein [Methylobacterium radiotolerans JCM 2831]
gi|170655288|gb|ACB24343.1| putative lipoprotein [Methylobacterium radiotolerans JCM 2831]
Length = 293
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 76/243 (31%), Positives = 130/243 (53%), Gaps = 3/243 (1%)
Query: 31 AVCFLVGWERQSSR---DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87
L G + + + Y V ++Y + L++ ++ A + F+ + +
Sbjct: 21 LGLGLGGCDFDPTSIFAEKYKPEVVPDVPADKLYSDGLAKLEDSDYEGAVKKFDNLDKQY 80
Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147
++ +RK+LLM+A+ Y KY A S + Y+ ++P SK+ Y YL+ MS + I D
Sbjct: 81 QYSEWSRKALLMTAYANYEGQKYDDAISASKRYLQRHPASKDAAYAQYLMAMSNYKQIPD 140
Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
V DQ ++ L + +V++Y S Y A+ + + R+QLA KE+EIGR+YL++ +
Sbjct: 141 VTRDQERSEKALVALQELVQKYPTSEYAADAKAKIQITRDQLAGKEMEIGRFYLEKRNFP 200
Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
AAI RF+ V+A Y HAEEA+ RL EAY AL + EA+ +++ +P+ W +
Sbjct: 201 AAINRFRDVVAKYQTTRHAEEALERLTEAYWALGITQEAQNAAAVLGHNFPESPWYKDAH 260
Query: 268 TLV 270
L+
Sbjct: 261 ALL 263
Score = 35.5 bits (79), Expect = 7.9, Method: Composition-based stats.
Identities = 10/103 (9%), Positives = 29/103 (28%), Gaps = 8/103 (7%)
Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
+ + +Y AI + L + ++ A A + +
Sbjct: 74 DNLDKQYQYSEWSRKALLMTAYANYEGQKYDDAISASKRYLQRHPASKDAAYAQYLMAMS 133
Query: 237 YVAL--------ALMDEAREVVSLIQERYPQGYWARYVETLVK 271
++A + + ++YP +A + ++
Sbjct: 134 NYKQIPDVTRDQERSEKALVALQELVQKYPTSEYAADAKAKIQ 176
>gi|255263345|ref|ZP_05342687.1| tetratricopeptide TPR_2 repeat protein [Thalassiobium sp. R2A62]
gi|255105680|gb|EET48354.1| tetratricopeptide TPR_2 repeat protein [Thalassiobium sp. R2A62]
Length = 284
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 74/251 (29%), Positives = 127/251 (50%), Gaps = 3/251 (1%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
+++ I + V L G SR + E++++ L A Y
Sbjct: 9 KRWSTRIGTVLVVGLLAGCGSFDSRPKV---PLENYSAEEIFQRGEFELNRGREDDAAFY 65
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
F + R +P++ A+++L+M AF + Y + S + +I YP ++ Y YL+ +
Sbjct: 66 FGEIERLYPYSEWAKRALIMQAFAYHKDRDYPNSRSSAQRFIDFYPADEDAAYAQYLLAL 125
Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
SY I ++ DQ T LQ + ++ERY +S Y + + + + LAAKE+EIGRY
Sbjct: 126 SYYDQIDEIGRDQGLTFQALQALRTVIERYPDSEYARSSILKFDLAFDHLAAKEMEIGRY 185
Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
Y++ G Y A+I RF+ V+ ++ H EA+ RLVEAY++L L DEA+ +++ Y
Sbjct: 186 YIQDGHYAASINRFRTVVEDFQTTSHTPEALHRLVEAYLSLGLTDEAQTAGAILGHNYQS 245
Query: 260 GYWARYVETLV 270
W + +L+
Sbjct: 246 TEWYQDSYSLL 256
>gi|330994414|ref|ZP_08318340.1| UPF0169 lipoprotein [Gluconacetobacter sp. SXCC-1]
gi|330995012|ref|ZP_08318932.1| UPF0169 lipoprotein [Gluconacetobacter sp. SXCC-1]
gi|329757925|gb|EGG74449.1| UPF0169 lipoprotein [Gluconacetobacter sp. SXCC-1]
gi|329758540|gb|EGG75058.1| UPF0169 lipoprotein [Gluconacetobacter sp. SXCC-1]
Length = 294
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 59/246 (23%), Positives = 117/246 (47%), Gaps = 2/246 (0%)
Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85
+ L + +S + V +Y V L+ + + F+ R
Sbjct: 23 LVLVPLAGLLAACGQSAS--SINERAPRVGSAETLYNNGVDALRSDRYLLSVNQFDTLQR 80
Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
++P++ + LM + Y KY +A + ++ +P S + Y +YL + Y + +
Sbjct: 81 NYPYSQYTANAQLMEGYANYLLNKYPEAVQQLDRFLELHPTSADAAYAFYLRALCYYEQV 140
Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
DV DQ+ T + + ++ R+ SPY + A+ + + R+ LA KE+ +GR+Y ++ +
Sbjct: 141 ADVQRDQQGTIEAMDALEEVITRFPQSPYARDAQLKIDLCRDHLAGKEMLVGRWYQQQND 200
Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
Y AA R+Q V+ ++ H EA+ RLVE Y+ + L+++AR+ +++ YP W
Sbjct: 201 YPAAAGRYQRVVQDFQTTNHVPEALERLVEVYLDMGLLEQARKTGAVLAYNYPSSKWYTD 260
Query: 266 VETLVK 271
++
Sbjct: 261 AYDHLR 266
>gi|49475847|ref|YP_033888.1| competence lipoprotein comL precursor [Bartonella henselae str.
Houston-1]
gi|49238655|emb|CAF27901.1| Competence lipoprotein comL precursor [Bartonella henselae str.
Houston-1]
Length = 297
Score = 123 bits (307), Expect = 3e-26, Method: Composition-based stats.
Identities = 85/255 (33%), Positives = 134/255 (52%), Gaps = 1/255 (0%)
Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDV-RYQREVYEKAVLFLKEQNFSKA 76
+ + L + F + C L G + + + +Y +A+ L+ + A
Sbjct: 17 NILRKVLGMIFLGSTCILAGCLFKEKNTLDPSAYVLKIDPPDVLYNQALASLESGRLADA 76
Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
+ F + + + RKSL+M AF Y KY + S+ + YIT YPE+ + Y YY+
Sbjct: 77 SKKFLIIEKQYAYTDWGRKSLVMGAFTNYRLEKYDDSISMAQRYITLYPEADDAAYAYYI 136
Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196
+G+S + I DV DQR TK + M ++ERY NS YVK A+ + GR QLA KE+++
Sbjct: 137 IGLSSFRRIPDVTRDQRDTKRAIAAMQLLIERYPNSEYVKDAKAKIRFGREQLAGKEMQV 196
Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
GRYY + Y+AA RF+ V+ YSD EEA+ RL E +AL L EA+ +++
Sbjct: 197 GRYYEEGRRYLAASRRFRKVVEEYSDTNQIEEALFRLTEVNLALGLTLEAQTAAAILGRN 256
Query: 257 YPQGYWARYVETLVK 271
YP+ W ++ L++
Sbjct: 257 YPKSEWYKFSYNLLQ 271
>gi|58038651|ref|YP_190615.1| lipoprotein [Gluconobacter oxydans 621H]
gi|58001065|gb|AAW59959.1| Hypothetical lipoprotein [Gluconobacter oxydans 621H]
Length = 299
Score = 123 bits (307), Expect = 3e-26, Method: Composition-based stats.
Identities = 66/252 (26%), Positives = 116/252 (46%), Gaps = 5/252 (1%)
Query: 22 FALTIFFSIAVCFLVGWE--RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
F L L G + D +Y + L ++ A
Sbjct: 18 FILRAAAVSGFLLLSGCSLFSHQHEKPAIPKTAD---AETLYNYGIDALHTGHYELAGGE 74
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
F +++P++G + LM + Y G+Y + E Y+ +P S + Y +YL +
Sbjct: 75 FELLQQNYPYSGFTGNAELMEGYAYYLQGEYALSVQQLERYLQLHPTSPDAAYAFYLRAL 134
Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
Y + I +V DQ+ T L + ++ R+ + Y + A+ + + R+ LA KE+ +GR+
Sbjct: 135 CYYEQIANVERDQQGTVEALDALEEVITRFPQTSYARDAQLKIDLCRDHLAGKEMLVGRW 194
Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
Y ++ Y AA+ R+Q V+ +Y H EA+ RLVE Y+AL L D+A + +++ YP
Sbjct: 195 YQQQRNYEAAMTRYQRVVQDYQTTNHVAEALERLVEVYLALGLKDQAHQTAAVLGYNYPD 254
Query: 260 GYWARYVETLVK 271
W RY ++
Sbjct: 255 SQWYRYAYNDLR 266
>gi|217979600|ref|YP_002363747.1| outer membrane assembly lipoprotein YfiO [Methylocella silvestris
BL2]
gi|217504976|gb|ACK52385.1| outer membrane assembly lipoprotein YfiO [Methylocella silvestris
BL2]
Length = 288
Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats.
Identities = 80/227 (35%), Positives = 128/227 (56%)
Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
D Y + ++Y + + LK +++ A + F + +P++ RK L+M+ F Q
Sbjct: 38 DKYKPEILKDTPAEDLYNQGLARLKVRDYPAAAKSFAALDKQYPYSQWQRKGLIMTTFAQ 97
Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
Y AG Y+ A + YI +P++ +VDY YYL MSY I D+ DQ + ++
Sbjct: 98 YQAGSYEDAIGSAKRYIGLFPQAADVDYAYYLEAMSYYNQIPDISRDQDRSAKAADLFAQ 157
Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
I+E+Y S YV +R+ + V R+QLA KE+ +GR+YL + YVAA+ RF+ VLA Y
Sbjct: 158 IIEKYPKSEYVDDSRYKLQVTRDQLAGKEMMVGRFYLNQRNYVAAVGRFREVLAKYQTTR 217
Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
HAEEA+ RL EAY+AL + EA+ +++ +P W + L++
Sbjct: 218 HAEEALMRLTEAYLALGVPQEAQTAAAILGHNFPDSVWYKDAYALLR 264
>gi|154244287|ref|YP_001415245.1| putative lipoprotein [Xanthobacter autotrophicus Py2]
gi|154158372|gb|ABS65588.1| putative lipoprotein [Xanthobacter autotrophicus Py2]
Length = 284
Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats.
Identities = 78/237 (32%), Positives = 126/237 (53%), Gaps = 5/237 (2%)
Query: 35 LVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR 94
+ G + D ++Y + + L+ Q KA + F + P++ AR
Sbjct: 29 VTGCASDKDDVLPPDEP-----AEKIYNEGLTLLRRQEPEKAAKRFEDVDKTHPYSEWAR 83
Query: 95 KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
KSLLM+ + + AGKY +A + G+ YI YP S++ Y +YLV + + I D+ DQR
Sbjct: 84 KSLLMTTYAYFEAGKYDEAIATGKRYIALYPGSQDAAYAHYLVASALYENIPDITRDQRK 143
Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
T+ L + + +Y N+ Y A+ + V R+QLA KE+ IGRYYL++ Y AI RF+
Sbjct: 144 TRQALDALEDVARKYPNTEYAATAKKKIEVARDQLAGKEMLIGRYYLEQRNYTGAINRFK 203
Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+V+ Y EEA+ RL EAY+AL ++ EA+ +++ +P W + LV+
Sbjct: 204 VVVTQYQTTRQVEEALYRLTEAYMALGVVSEAQTAAAVLGYNFPDSSWYKDAYKLVQ 260
>gi|296116445|ref|ZP_06835059.1| hypothetical protein GXY_11614 [Gluconacetobacter hansenii ATCC
23769]
gi|295977038|gb|EFG83802.1| hypothetical protein GXY_11614 [Gluconacetobacter hansenii ATCC
23769]
Length = 292
Score = 122 bits (305), Expect = 5e-26, Method: Composition-based stats.
Identities = 62/241 (25%), Positives = 118/241 (48%), Gaps = 3/241 (1%)
Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90
A+ FL S ++ V +Y V L+ + A F+ R++P++
Sbjct: 27 ALAFLAACNGNS---AIMEHAPRVGSAETLYNHGVDALRTNRYVLATIQFDVLQRNYPYS 83
Query: 91 GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150
+ LM + Y KY +A + ++ +P S + Y +YL + Y + + DV
Sbjct: 84 QYTANAQLMEGYSDYLQSKYPEAVQQLDRFLELHPTSSDAAYAFYLRALCYYEQVADVQR 143
Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
DQ+ T + + ++ R+ +PY + A+ + + R+ LA KE+ +GR+Y ++ Y AA+
Sbjct: 144 DQQGTIESMDALEEVITRFPQTPYARDAQLKIDLCRDHLAGKEMLVGRFYQEQRNYQAAV 203
Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
R+Q V+ ++ H EA+ RLVE Y+ L L+++AR+ +++ YP W +
Sbjct: 204 NRYQRVVQDFQTTNHVPEALERLVEVYLDLGLLEQARKTGAVLAYNYPDSKWYHDAYDHL 263
Query: 271 K 271
+
Sbjct: 264 R 264
>gi|118590884|ref|ZP_01548284.1| putative lipoprotein [Stappia aggregata IAM 12614]
gi|118436406|gb|EAV43047.1| putative lipoprotein [Stappia aggregata IAM 12614]
Length = 270
Score = 122 bits (305), Expect = 5e-26, Method: Composition-based stats.
Identities = 62/230 (26%), Positives = 123/230 (53%)
Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
+D + + ++ + + + + + F + + +P++ ++KSL+
Sbjct: 19 CGGKDDLDELALNDTPPEVLFNEGLSLRAQGKLRDSAQKFEELDKLYPYSEYSKKSLVNL 78
Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
AF+ YS GKY + + + ++T YP ++ Y+ YL G +Y + + D+ DQ T+
Sbjct: 79 AFLNYSRGKYTETVTAAKRFVTLYPGDEDSAYMLYLAGQAYFRQMPDITRDQAVTRKAAG 138
Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220
+ +++R+ S YV A + + +QL KE+++GR+YL++ Y+A I RF+ V+ +Y
Sbjct: 139 AFNELIQRFPESEYVPDAESKLRIVHDQLGGKEMQVGRFYLQKRNYIAGINRFKTVVVDY 198
Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
H EEA+ RL EAY AL +++EA+ +++ YP W + +L+
Sbjct: 199 QTTRHVEEALFRLTEAYYALGVVNEAQTAAAVLGHNYPDSQWYKDAYSLL 248
>gi|157825369|ref|YP_001493089.1| hypothetical protein A1C_01315 [Rickettsia akari str. Hartford]
gi|157799327|gb|ABV74581.1| hypothetical protein A1C_01315 [Rickettsia akari str. Hartford]
Length = 247
Score = 122 bits (305), Expect = 5e-26, Method: Composition-based stats.
Identities = 73/242 (30%), Positives = 124/242 (51%), Gaps = 6/242 (2%)
Query: 30 IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89
+ G + + + D + + +Y + V L +Q + KA E F + P
Sbjct: 12 VIGLVFSGCKSKKTSDDIVVPIP------TLYNEGVTLLAKQKYKKAAEEFGRVFYQHPG 65
Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
+ ++ LM A+ + A +Y++A + E +I +P + ++ Y YYL +SY ++ DV
Sbjct: 66 NAMTPQAELMQAYSLFLAAQYEEAVDVLEMFINLHPANVDIAYAYYLKALSYYMLVSDVN 125
Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
+DQ T L ++ R+ N+ Y + + + + LA KE+ +GR+YLK+ +AA
Sbjct: 126 HDQSRTSLAKDSFEDVIARFPNTKYAIDSSLKIDLVNDHLAGKEMMVGRFYLKKQNPMAA 185
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
I RF+ V+ NY H+ EA+ RLVE Y+ L L DEA++ S++ YP W Y L
Sbjct: 186 INRFEEVIDNYQTTSHSVEALYRLVEIYMMLGLPDEAQKYASVLGYNYPDSPWYSYAYKL 245
Query: 270 VK 271
VK
Sbjct: 246 VK 247
>gi|329848741|ref|ZP_08263769.1| hypothetical protein ABI_18130 [Asticcacaulis biprosthecum C19]
gi|328843804|gb|EGF93373.1| hypothetical protein ABI_18130 [Asticcacaulis biprosthecum C19]
Length = 295
Score = 122 bits (305), Expect = 5e-26, Method: Composition-based stats.
Identities = 78/254 (30%), Positives = 135/254 (53%), Gaps = 4/254 (1%)
Query: 18 QLYKF-ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76
+L+K A+ + +A+ L G + + R +Y + L ++++++A
Sbjct: 5 RLFKTSAMVLAAGMALTALSGCAGKGDEQHLVYE---ERPVELLYATGMERLDDKSWNEA 61
Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
+YF + R P++ +R++++M+ + Y AGKY +A++ +++I YP S+ Y YY+
Sbjct: 62 GQYFEEVQRQHPYSEWSRRAIVMTIYTHYQAGKYAEASAASDQFIHLYPGSELTPYAYYM 121
Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196
+ + I DV DQ +T +S +V RY +S Y K AR + + ++QLA KE+EI
Sbjct: 122 KAICSFEQIVDVGRDQASTTAAQALLSDVVRRYPSSEYAKDARVKIDMVQDQLAGKEMEI 181
Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
GRYYL + +AAI RF+ V + Y H EA+ RLVEA + L +EA +++
Sbjct: 182 GRYYLNDNQPLAAIGRFKTVASTYQTTSHTPEALYRLVEANEVMGLHEEAMRNGAVLGYN 241
Query: 257 YPQGYWARYVETLV 270
YP W L+
Sbjct: 242 YPGDRWYAAAYKLL 255
>gi|154252872|ref|YP_001413696.1| DNA uptake lipoprotein [Parvibaculum lavamentivorans DS-1]
gi|154156822|gb|ABS64039.1| DNA uptake lipoprotein [Parvibaculum lavamentivorans DS-1]
Length = 291
Score = 122 bits (304), Expect = 6e-26, Method: Composition-based stats.
Identities = 77/233 (33%), Positives = 128/233 (54%), Gaps = 6/233 (2%)
Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
+ + R ++Y KA+ + ++ A + F++ R P++ AR+S+
Sbjct: 42 CSSDD------ELPYEERPVEQIYNKAMDHMAAGDYIPAAKEFDEVERQHPYSEWARRSM 95
Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
LMSA+ Y +Y +A + +I+ +P +K+V Y YYL+G+SY + I DV DQ+ T+
Sbjct: 96 LMSAYAHYKINEYDEAILSAQRFISLHPSNKDVPYAYYLIGLSYYERISDVGRDQKMTEN 155
Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
L + +R+ +S Y + AR + + + LA KE+EIGRYYL R +YVAAI RF++V+
Sbjct: 156 ALNSFYELTQRFPSSEYSRDARLKIDLTLDHLAGKEMEIGRYYLIRRDYVAAINRFRVVI 215
Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
Y H EA+ RL EAY+AL + EA+ +++ YP W ++
Sbjct: 216 EKYQTTTHTPEALERLTEAYLALGVKTEAQTAAAILGYNYPGSDWYEDSYAML 268
>gi|218673357|ref|ZP_03523026.1| competence lipoprotein protein [Rhizobium etli GR56]
Length = 248
Score = 122 bits (304), Expect = 6e-26, Method: Composition-based stats.
Identities = 91/249 (36%), Positives = 144/249 (57%), Gaps = 5/249 (2%)
Query: 19 LYKFALTIFFSIAVCF----LVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFS 74
+ K A +F S+ V + G + + +Y + + +K N +
Sbjct: 1 MMKTARALFASLLVLSAGASISGCQSDPD-IDITKLGLETDPPDVLYTQGLANMKAGNMA 59
Query: 75 KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
+A F+ R+ PF+ ARK+L+MS FV+Y G+ A + G Y+ QYP+S++ YV
Sbjct: 60 EAARKFDAIDRENPFSEWARKALVMSTFVKYRQGRLDDALASGNRYMAQYPKSQDAAYVQ 119
Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
YLVG++Y++ I DV DQRA+ ++ M +V+ Y NS YV A+ + R+QLA KE+
Sbjct: 120 YLVGLTYSKQIVDVTQDQRASAKTIEAMQAVVDNYPNSEYVDDAQAKIRYARDQLAGKEM 179
Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
+IGRYY++R EY+AAI RF++V+ Y + EEA+ARLVEAY A+ ++DEA+ +++
Sbjct: 180 QIGRYYMERKEYLAAISRFRIVVEKYPNTNQIEEALARLVEAYYAMGIVDEAQTAAAVLG 239
Query: 255 ERYPQGYWA 263
YP W
Sbjct: 240 HNYPDSQWY 248
>gi|294085893|ref|YP_003552653.1| competence lipoprotein ComL [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292665468|gb|ADE40569.1| competence lipoprotein ComL, putative [Candidatus Puniceispirillum
marinum IMCC1322]
Length = 270
Score = 122 bits (304), Expect = 6e-26, Method: Composition-based stats.
Identities = 69/251 (27%), Positives = 118/251 (47%), Gaps = 6/251 (2%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K I + + G + R ++Y +A+ N KA
Sbjct: 1 MVKHIPLIVLASTALLVAGCSSTEVEEQV------ERPVEQLYNEALNTALAGNAKKAAP 54
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
F + R P++ +A ++ LM+A+ Y Y +A + + ++ P + V+Y YYL
Sbjct: 55 KFEEVERQHPYSSLAVRAQLMAAWAFYQDNNYPRAIAALDRFVELNPADERVEYAYYLKA 114
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
+ Y + I DV D TKL +Q +V R+ + Y + A + + R+ LA KE+ +GR
Sbjct: 115 LCYYEQIVDVQRDAEMTKLAMQAFEELVRRFPDGDYFRDATLKIDLTRSHLAGKEMAVGR 174
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
+YL + Y AA+ RF+ V+ +Y EA+ R+ EAY++L L EA V + YP
Sbjct: 175 FYLSKQHYGAALRRFENVVTDYDTTNQVPEALYRMTEAYLSLGLASEANRVEEVAVYNYP 234
Query: 259 QGYWARYVETL 269
+ W + + L
Sbjct: 235 KSIWTQRLLEL 245
>gi|304392248|ref|ZP_07374190.1| lipoprotein [Ahrensia sp. R2A130]
gi|303296477|gb|EFL90835.1| lipoprotein [Ahrensia sp. R2A130]
Length = 278
Score = 122 bits (304), Expect = 6e-26, Method: Composition-based stats.
Identities = 77/233 (33%), Positives = 131/233 (56%), Gaps = 3/233 (1%)
Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
+ + ++D + Y +A+ L N S+A + F + R P++ A+K+
Sbjct: 24 CAKDEDINSFVDPTV---PADQTYNEALANLDAGNSSEAKKKFAKLDRQHPYSNYAKKAG 80
Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
+MS ++ Y + +Y +A + G+ ++ YP + Y YLVGMS+ + I DV DQ + K
Sbjct: 81 VMSTYLAYRSAEYPEAIARGKRFVQLYPSNAEAPYALYLVGMSHFRQINDVTRDQDSAKA 140
Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
Q MS +V+RY S YV+ A+ + + ++QLA KE+ +GRYY +R EY+A+I R++ V+
Sbjct: 141 AYQAMSNLVQRYPESEYVEDAKRKMRISKDQLAGKEMLVGRYYQERREYLASINRYRTVV 200
Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
+ D H EEA+ARL E+Y AL L EA+ +++ +P W + L+
Sbjct: 201 EQFEDTRHVEEALARLTESYYALGLQSEAQTAAAVLGHNFPDSQWYKDSYALL 253
>gi|87199749|ref|YP_497006.1| DNA uptake lipoprotein [Novosphingobium aromaticivorans DSM 12444]
gi|87135430|gb|ABD26172.1| DNA uptake lipoprotein [Novosphingobium aromaticivorans DSM 12444]
Length = 268
Score = 122 bits (304), Expect = 6e-26, Method: Composition-based stats.
Identities = 72/216 (33%), Positives = 119/216 (55%)
Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
R +Y A L + +A F++ R P++ AR++ LMSAF Y A Y ++
Sbjct: 43 RDVDTLYTAAKERLDRGDSKQAAALFDEVERQHPYSPWARRAQLMSAFSYYVARDYSKSV 102
Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
+ +++ +P +K+ Y YYL+ + Y + I DV DQ+ T+ L M+ +V RY N+ Y
Sbjct: 103 QSAQRFLSIHPGNKDAPYAYYLIALCYYEQISDVTRDQKITQQALTAMNELVRRYPNTDY 162
Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234
AR + + + LA KE+EIGR Y + G+++A+ RF+ V+ Y HA EA+ RLV
Sbjct: 163 AADARLKIDLINDHLAGKEMEIGRMYQRSGKWLASSLRFRTVVDKYQTTSHAPEALYRLV 222
Query: 235 EAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
E+Y++L L EA++ +++ YP W L+
Sbjct: 223 ESYLSLGLPVEAQKAAAVLGSNYPGSKWYERSFELM 258
>gi|149184730|ref|ZP_01863048.1| DNA uptake lipoprotein [Erythrobacter sp. SD-21]
gi|148832050|gb|EDL50483.1| DNA uptake lipoprotein [Erythrobacter sp. SD-21]
Length = 266
Score = 122 bits (304), Expect = 7e-26, Method: Composition-based stats.
Identities = 77/233 (33%), Positives = 121/233 (51%), Gaps = 2/233 (0%)
Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
S+R D+ R +Y +A L A F++ R P++ AR++
Sbjct: 26 CGGGSNRPE--DTAYVARDVETLYSQAKQELDRGRPQLAAALFDEVERQHPYSPWARRAQ 83
Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
LMSAF Y AG Y + S + +++ +P +K+ Y YYL+ +SY + I DV DQ+ T+
Sbjct: 84 LMSAFSYYVAGDYNKTTSSAQRFLSIHPGNKDAPYAYYLIALSYYEQISDVQRDQKVTEQ 143
Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
L + + R+ S Y AR + + + LA KE+EIGRYY + G+++AA RFQ V+
Sbjct: 144 ALTALREVNRRFPQSQYAADARLKIDLVEDHLAGKEMEIGRYYQRSGKWIAAQIRFQNVV 203
Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
Y HA EA+ RLVE+ +AL + EA + +++ YP W L+
Sbjct: 204 ETYQTTSHAPEALYRLVESSLALGIKPEAVKYAAVLGANYPGNEWYEKAYELI 256
>gi|91205917|ref|YP_538272.1| DNA uptake lipoprotein [Rickettsia bellii RML369-C]
gi|157826722|ref|YP_001495786.1| DNA uptake lipoprotein [Rickettsia bellii OSU 85-389]
gi|91069461|gb|ABE05183.1| DNA uptake lipoprotein [Rickettsia bellii RML369-C]
gi|157802026|gb|ABV78749.1| DNA uptake lipoprotein [Rickettsia bellii OSU 85-389]
Length = 253
Score = 121 bits (303), Expect = 8e-26, Method: Composition-based stats.
Identities = 71/253 (28%), Positives = 124/253 (49%), Gaps = 6/253 (2%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + L G + + S D + ++ +Y + V L+++ + A E
Sbjct: 1 MKLAKILSALLCLGLILNGCKSKKSNDDLVTPIS------TLYNEGVTLLEKKKYKNAAE 54
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
F + P ++ LM A+ + A +Y++A + + +I +P + ++ Y YYL
Sbjct: 55 EFEKIFYQHPGNEFTPQAELMQAYSLFLAAQYEEAVDVLDIFINLHPANVDIAYAYYLKA 114
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
+SY +I DV +DQ T L ++ ++ N+ Y + + + + LA KE+ IGR
Sbjct: 115 LSYYMLISDVNHDQSRTFLAKDSFEDLITKFPNTKYAIDSSLKIDLVNDHLAGKELTIGR 174
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
+YLK+ +AAI RF+ V+ NY H EA+ RL E+Y+ L L DEA + S++ YP
Sbjct: 175 FYLKKKNPMAAINRFEEVVENYQTTSHCVEALYRLTESYMMLGLSDEAMKYASVLGHNYP 234
Query: 259 QGYWARYVETLVK 271
W Y L+K
Sbjct: 235 DSKWYSYAYKLIK 247
>gi|84686348|ref|ZP_01014242.1| Putative ComL lipoprotein [Maritimibacter alkaliphilus HTCC2654]
gi|84665531|gb|EAQ12007.1| Putative ComL lipoprotein [Rhodobacterales bacterium HTCC2654]
Length = 297
Score = 121 bits (301), Expect = 1e-25, Method: Composition-based stats.
Identities = 74/258 (28%), Positives = 126/258 (48%), Gaps = 8/258 (3%)
Query: 21 KFALTIFFSIAVCFLVGWE--------RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQN 72
+ V L G D + ++Y +A L+ +
Sbjct: 12 RLLKGATTLALVVTLAGCSGTGLGTAFSNLFGDDRETKPIEDYTAEQIYARAEYDLENND 71
Query: 73 FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132
+ +A ++F + R +P+ +A+++L+M AF + G+Y+ A + + ++ YP ++ Y
Sbjct: 72 YDEAAKWFGEVERVYPYTQLAKRALIMQAFAHHKDGEYELARAAAQRFVDFYPGDEDAGY 131
Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
YL+ +SY I DV DQ T LQ + ++E Y ++ Y + A + + LAAK
Sbjct: 132 ATYLLALSYYDQIEDVGRDQGLTYQALQALRDVIELYPDTEYARSAILKFDLAYDHLAAK 191
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
E+EIGRYYLKR Y AA+ RF++V+ + EA+ RLVE+YV+L L DEA ++
Sbjct: 192 EMEIGRYYLKRKHYAAAVNRFRVVVEQFQTTTQTPEALHRLVESYVSLGLSDEAETAGAI 251
Query: 253 IQERYPQGYWARYVETLV 270
+ Y W + L+
Sbjct: 252 LGYNYQSTEWYQDSYNLL 269
>gi|157828109|ref|YP_001494351.1| hypothetical protein A1G_01315 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165932811|ref|YP_001649600.1| ComL family lipoprotein [Rickettsia rickettsii str. Iowa]
gi|157800590|gb|ABV75843.1| hypothetical protein A1G_01315 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165907898|gb|ABY72194.1| lipoprotein, ComL family [Rickettsia rickettsii str. Iowa]
Length = 251
Score = 121 bits (301), Expect = 1e-25, Method: Composition-based stats.
Identities = 69/242 (28%), Positives = 126/242 (52%), Gaps = 6/242 (2%)
Query: 30 IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89
+ L G + + + D + + +Y + + L+++ + A E F + P
Sbjct: 12 VIGLVLGGCKNKKTSDDIVVPIA------TLYNEGITLLEKKKYKNAAEEFGRVLYQHPG 65
Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
+ ++ LM A+ + A +Y++A + + +IT +P + ++ Y YYL +SY +I DV
Sbjct: 66 NEMTPQAELMQAYSLFLAAQYEEAVDVLDMFITLHPANVDIAYAYYLKALSYYMLISDVN 125
Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
+DQ T L ++ ++ N+ Y + + + + LA KE+ +GR+YLK+ +AA
Sbjct: 126 HDQSRTFLAKDSFEDVIAKFPNTKYAIDSSLKIDLVNDHLAGKEMMVGRFYLKKKNPMAA 185
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
I RF+ V+ NY H+ EA+ RL E+Y+ L L DEA++ S++ YP W Y L
Sbjct: 186 INRFEEVIDNYQTTSHSVEALYRLAESYMILGLPDEAKKYASVLGYNYPDSQWYSYAYRL 245
Query: 270 VK 271
V+
Sbjct: 246 VQ 247
>gi|296285037|ref|ZP_06863035.1| DNA uptake lipoprotein [Citromicrobium bathyomarinum JL354]
Length = 268
Score = 121 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 75/223 (33%), Positives = 118/223 (52%)
Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
D+ R +Y A L N A F++ R P++ AR++ LMSAF Y +
Sbjct: 34 DTAYVARDVETLYATAKQRLDRGNPQLAAALFDEVERQHPYSPWARRAQLMSAFSYYVSR 93
Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
Y +A + +++ +P +K+ Y YYL+ +SY + I DV DQ+ T+ L + + R
Sbjct: 94 DYSKAIQSAQRFLSIHPGNKDAPYAYYLIALSYYEQISDVQRDQKITEQALVALREVERR 153
Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
+ S Y AR + + R+ LA KE++IGR+Y K G++ AA RFQ V+ NY HA E
Sbjct: 154 FPQSEYAADARLKIDLVRDHLAGKEMDIGRFYEKSGKWTAAQIRFQNVVENYQTTSHAAE 213
Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
A+ RL E +AL + EA++ +++ YP W LV+
Sbjct: 214 ALYRLTETSLALGIPQEAKKYAAVLGANYPGSEWYDKAYALVE 256
>gi|229586426|ref|YP_002844927.1| DNA uptake lipoprotein [Rickettsia africae ESF-5]
gi|228021476|gb|ACP53184.1| DNA uptake lipoprotein [Rickettsia africae ESF-5]
Length = 251
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 68/242 (28%), Positives = 125/242 (51%), Gaps = 6/242 (2%)
Query: 30 IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89
+ L G + + + D + + +Y + + L+++ + A E F + P
Sbjct: 12 VIGLVLGGCKNKKNSDDIVVPIA------TLYNEGITLLEKKKYKNAAEEFGRVLYQHPG 65
Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
+ ++ LM A+ + A +Y++A + + +I +P + ++ Y YYL +SY +I DV
Sbjct: 66 NEMTPQAELMQAYSLFLAAQYEEAVDVLDMFIKLHPANVDIAYAYYLKALSYYMLISDVN 125
Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
+DQ T L ++ ++ N+ Y + + + + LA KE+ +GR+YLK+ +AA
Sbjct: 126 HDQSRTFLAKDSFEDVIAKFPNTKYAIDSSLKIDLVNDHLAGKEMTVGRFYLKKKNPMAA 185
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
I RF+ V+ NY H+ EA+ RL E+Y+ L L DEA++ S++ YP W Y L
Sbjct: 186 INRFEEVIDNYQTTSHSVEALYRLAESYMMLGLPDEAKKYASVLGYNYPDSQWYSYAYRL 245
Query: 270 VK 271
V+
Sbjct: 246 VQ 247
>gi|148259767|ref|YP_001233894.1| DNA uptake lipoprotein-like protein [Acidiphilium cryptum JF-5]
gi|326403265|ref|YP_004283346.1| putative lipoprotein [Acidiphilium multivorum AIU301]
gi|146401448|gb|ABQ29975.1| DNA uptake lipoprotein-like protein [Acidiphilium cryptum JF-5]
gi|325050126|dbj|BAJ80464.1| putative lipoprotein [Acidiphilium multivorum AIU301]
Length = 315
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 61/217 (28%), Positives = 107/217 (49%)
Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
+ +Y + +L + KA F + ++P++ A + L+ + +Y + A
Sbjct: 77 KPASALYADGIAYLHKGENKKAARTFGEIEVNYPYSTWASHAELLQGYAEYREQNFDSAV 136
Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
S +I +P S Y YYL + + + I DV DQ T Q + ++ R+ +S Y
Sbjct: 137 SALNRFIELHPASPEAAYAYYLKALCFYEQIEDVQRDQTFTLEAAQALQDVISRFPDSAY 196
Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234
+ AR + + N+LA ++E+GR+Y ++ Y AAI R+Q+V+ Y EA+ RLV
Sbjct: 197 ARDARIKLRLVENRLAGHQMEVGRFYQRQNLYAAAISRYQVVVQQYQTTTFVPEALDRLV 256
Query: 235 EAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
E Y+ L L+ EAR +++ YP W R ++
Sbjct: 257 ECYLDLGLVKEARRNAAVLGYNYPGSRWYRNAYATLR 293
>gi|238650459|ref|YP_002916311.1| ComL family lipoprotein [Rickettsia peacockii str. Rustic]
gi|238624557|gb|ACR47263.1| ComL family lipoprotein [Rickettsia peacockii str. Rustic]
Length = 251
Score = 120 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 68/242 (28%), Positives = 125/242 (51%), Gaps = 6/242 (2%)
Query: 30 IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89
+ L G + + + D + + +Y + + L+++ + A E F + P
Sbjct: 12 VIGLVLGGCKNKKTSDDIVVPIA------TLYNEGITLLEKKKYKNAAEEFGRVLYQHPG 65
Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
+ ++ LM A+ + A +Y++A + + +I +P + ++ Y YYL +SY +I DV
Sbjct: 66 NEMTPQAELMQAYSLFLAAQYEEAVDVLDMFIKLHPANVDIAYAYYLKALSYYMLISDVN 125
Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
+DQ T L ++ ++ N+ Y + + + + LA KE+ +GR+YLK+ +AA
Sbjct: 126 HDQSRTFLAKDSFEDVIAKFPNTKYAIDSSLKIDLVNDHLAGKEMMVGRFYLKKKNPMAA 185
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
I RF+ V+ NY H+ EA+ RL E+Y+ L L DEA++ S++ YP W Y L
Sbjct: 186 INRFEEVIDNYQTTSHSVEALYRLAESYMILGLPDEAKKYASVLGYNYPDSQWYSYAYRL 245
Query: 270 VK 271
V+
Sbjct: 246 VQ 247
>gi|75675253|ref|YP_317674.1| putative lipoprotein [Nitrobacter winogradskyi Nb-255]
gi|74420123|gb|ABA04322.1| putative lipoprotein [Nitrobacter winogradskyi Nb-255]
Length = 298
Score = 120 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 72/225 (32%), Positives = 121/225 (53%), Gaps = 1/225 (0%)
Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAY-EYFNQCSRDFPFAGVARKSLLMSAFVQY 105
+ ++Y + + + +Q KA + F++ R+ P++ ARKSLLMSA+ Y
Sbjct: 49 KDEETFSDEPADKLYNEGLFLMNKQRDLKAVTKKFDEVDREHPYSEWARKSLLMSAYASY 108
Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
AG Y Y+T +P S + Y YL+ +S I DV DQ T+ ++ + +
Sbjct: 109 QAGDYDTCIGSASRYVTLHPGSPDAAYAQYLIAVSNYDQIADVSRDQARTEKAMRTLEEV 168
Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
+ +Y S Y A+ + R+QLA KE+ +GRYY++R +Y AI RF+ V+ + H
Sbjct: 169 IRKYPTSEYAGEAKKKLQGARDQLAGKEMAVGRYYMERRDYTGAINRFKTVVTRFQTTRH 228
Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
EEA+ARL EAY+A+ ++ EA+ +++ +P +W + LV
Sbjct: 229 VEEALARLTEAYMAIGIVAEAQTAAAVLGHNFPDSHWYKDAYNLV 273
Score = 35.5 bits (79), Expect = 8.7, Method: Composition-based stats.
Identities = 10/103 (9%), Positives = 27/103 (26%), Gaps = 8/103 (7%)
Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
+ + G+Y I + + + A A + +
Sbjct: 84 DEVDREHPYSEWARKSLLMSAYASYQAGDYDTCIGSASRYVTLHPGSPDAAYAQYLIAVS 143
Query: 237 YVAL--------ALMDEAREVVSLIQERYPQGYWARYVETLVK 271
A ++A + + +YP +A + ++
Sbjct: 144 NYDQIADVSRDQARTEKAMRTLEEVIRKYPTSEYAGEAKKKLQ 186
>gi|67459480|ref|YP_247104.1| hypothetical protein RF_1088 [Rickettsia felis URRWXCal2]
gi|67005013|gb|AAY61939.1| unknown [Rickettsia felis URRWXCal2]
Length = 251
Score = 120 bits (299), Expect = 3e-25, Method: Composition-based stats.
Identities = 73/253 (28%), Positives = 128/253 (50%), Gaps = 6/253 (2%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ L I L G + + + D + + +Y + V L+++ + KA E
Sbjct: 1 MKLTKLLSILFIIGLSLSGCKSKKNSDDIVVPIP------TLYNEGVSLLEKKKYKKAAE 54
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
F + P + ++ LM + + A +Y++A + + +I +P + ++ Y YYL
Sbjct: 55 EFGRVFYQHPGNEMTPQAELMQGYSLFLAAQYEEAVDVLDMFINLHPANVDIAYAYYLKA 114
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
+SY +I DV +DQ T L ++ ++ N+ Y + + + + LA KE+ +GR
Sbjct: 115 LSYYMLISDVNHDQSRTFLAKDSFEDVIGKFPNTKYAIDSSLKIDLVNDHLAGKEMMVGR 174
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
+YLK+ +AAI RF+ V+ NY H+ EA+ RLVE+Y+ L L DEA++ S++ YP
Sbjct: 175 FYLKKKNPMAAINRFEEVIDNYQTTSHSVEALYRLVESYMMLGLADEAKKYASVLGYNYP 234
Query: 259 QGYWARYVETLVK 271
W Y LVK
Sbjct: 235 DSQWYSYAYKLVK 247
>gi|34580817|ref|ZP_00142297.1| hypothetical protein [Rickettsia sibirica 246]
gi|28262202|gb|EAA25706.1| unknown [Rickettsia sibirica 246]
Length = 251
Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats.
Identities = 68/242 (28%), Positives = 125/242 (51%), Gaps = 6/242 (2%)
Query: 30 IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89
+ L G + + + D + + +Y + + L+++ + A E F + P
Sbjct: 12 VIGLVLGGCKNKKNSDDIVVPIA------TLYNEGITLLEKKKYKNAAEEFGRVLYQHPG 65
Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
+ ++ LM A+ + A +Y++A + + +I +P + ++ Y YYL +SY +I DV
Sbjct: 66 NEMTPQAELMQAYSLFLAAQYEEAVDVLDMFIKLHPANVDIAYAYYLKALSYYMLISDVN 125
Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
+DQ T L ++ ++ N+ Y + + + + LA KE+ +GR+YLK+ +AA
Sbjct: 126 HDQSRTFLAKDSFEDVIAKFPNTKYAIDSSLKIDLVNDHLAGKEMMVGRFYLKKKNPMAA 185
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
I RF+ V+ NY H+ EA+ RL E+Y+ L L DEA++ S++ YP W Y L
Sbjct: 186 INRFEEVIDNYQTTSHSVEALYRLAESYMMLGLPDEAKKYASVLGYNYPDSQWYSYAYRL 245
Query: 270 VK 271
V+
Sbjct: 246 VQ 247
>gi|209963938|ref|YP_002296853.1| tetratricopeptide repeat family protein [Rhodospirillum centenum
SW]
gi|209957404|gb|ACI98040.1| tetratricopeptide repeat family protein [Rhodospirillum centenum
SW]
Length = 274
Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats.
Identities = 74/220 (33%), Positives = 122/220 (55%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
R ++Y +A L +N+ KA F++ R P++ A ++ LM+A+ Y A +Y
Sbjct: 35 PYIERPVEQIYTEAANALDNENYLKAAALFDEVERQHPYSQWAVRAQLMAAYAHYEALRY 94
Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
A + + +I+ +P ++N Y YYL + Y + I DV DQ T+ L + + R+
Sbjct: 95 DDAITTLDRFISLHPGNRNAAYAYYLKALCYYEQISDVRRDQSMTESALTALQDVARRFP 154
Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
+ Y + A + + R+ LA K++E+GRYYL G+Y+AAI RF+ V+ Y H EA+
Sbjct: 155 ATTYARDANLKLDLTRDHLAGKDMEVGRYYLVTGQYMAAIKRFRRVVDKYQTTSHVPEAL 214
Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
RL EAY+AL ++DEA+ +L+ YP W + TL+
Sbjct: 215 HRLTEAYLALGIVDEAQASAALLGHNYPGSDWYQRTYTLM 254
>gi|149914537|ref|ZP_01903067.1| competence lipoprotein ComL, putative [Roseobacter sp. AzwK-3b]
gi|149811330|gb|EDM71165.1| competence lipoprotein ComL, putative [Roseobacter sp. AzwK-3b]
Length = 282
Score = 119 bits (297), Expect = 4e-25, Method: Composition-based stats.
Identities = 74/242 (30%), Positives = 126/242 (52%), Gaps = 1/242 (0%)
Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
+ L G S R + + +++E+A L + A E F + R +P
Sbjct: 14 IVVGLGLAGCSENS-RVERGEVDFENYTAEQIFERAEYDLSRNDPDLAAEVFGEVERLYP 72
Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
++ A+++L+M AF + A Y+ + + + +I YP ++ Y YL+ +SY I +V
Sbjct: 73 YSEWAKRALIMQAFSYHQAEDYENSRASAQRFIDFYPTDEDAAYAQYLLALSYYDQIDEV 132
Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
DQ T LQ + ++ER+ +S Y + + + + LAAKE+EIGRYYL+ + A
Sbjct: 133 GRDQGLTFQALQSLREVIERHPDSEYAQSSVLKFDLAFDHLAAKEMEIGRYYLRGDHFSA 192
Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
AI RF++V+ ++ H EA+ RLVEAY++L L DEAR +++ + W T
Sbjct: 193 AINRFRVVVEDFQTTSHTAEALHRLVEAYLSLGLTDEARTAGAILGYNFRGTQWYEDSYT 252
Query: 269 LV 270
L+
Sbjct: 253 LL 254
>gi|15892153|ref|NP_359867.1| hypothetical protein RC0230 [Rickettsia conorii str. Malish 7]
gi|15619283|gb|AAL02768.1| unknown [Rickettsia conorii str. Malish 7]
Length = 251
Score = 118 bits (295), Expect = 7e-25, Method: Composition-based stats.
Identities = 68/242 (28%), Positives = 125/242 (51%), Gaps = 6/242 (2%)
Query: 30 IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89
+ L G + + + D + + +Y + + L+++ + A E F + P
Sbjct: 12 VIGLVLGGCKNKKNSDDIVVPIA------TLYNEGITLLEKKKYKNAAEEFGRVLYQHPG 65
Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
+ ++ LM A+ + A +Y++A + + +I +P + ++ Y YYL +SY +I DV
Sbjct: 66 NEMTPQAELMQAYSLFLAAQYEEAVDVLDMFIKLHPANVDIAYAYYLKALSYYMLISDVN 125
Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
+DQ T L ++ ++ N+ Y + + + + LA KE+ +GR+YLK+ +AA
Sbjct: 126 HDQSRTFLAKDSFEDVIAKFPNTKYAIDSSLKIDLVNDHLAGKEMMVGRFYLKKKNPMAA 185
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
I RF+ V+ NY H+ EA+ RL E+Y+ L L DEA++ S++ YP W Y L
Sbjct: 186 INRFEEVIDNYQTTSHSVEALYRLAESYMMLGLSDEAKKYASVLGYNYPDSQWYSYAYRL 245
Query: 270 VK 271
V+
Sbjct: 246 VQ 247
>gi|83949542|ref|ZP_00958275.1| competence lipoprotein ComL, putative [Roseovarius nubinhibens ISM]
gi|83837441|gb|EAP76737.1| competence lipoprotein ComL, putative [Roseovarius nubinhibens ISM]
Length = 283
Score = 118 bits (294), Expect = 9e-25, Method: Composition-based stats.
Identities = 72/250 (28%), Positives = 129/250 (51%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
K I + L G R D + + ++E+ L +N+ A + F
Sbjct: 6 KRVTLIGAVLVASLLAGCNSIRGRVERGDLDYENYTAQHIFERGEYDLSRRNYDLAAQSF 65
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
+ R +P++ + +++++M A+ + Y+ + S + YI YP ++ Y YL+ +S
Sbjct: 66 GEIERLYPYSELTKRAVIMQAYSHHLDKDYEASRSAAQRYIDFYPTDEDAAYAQYLLALS 125
Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
Y I +V DQ T L LQ + +++E Y +S Y + A + + LA+KE+E+GRYY
Sbjct: 126 YYDQIDEVGRDQGLTFLALQELRKVIEIYPDSEYARSAILKFDLAFDHLASKEMEVGRYY 185
Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
LKR + AAI RF++V+ ++ H EA+ RLVEAY++L L++EA+ +++ +
Sbjct: 186 LKRDHFSAAINRFRVVVEDFQTTSHTPEALHRLVEAYLSLGLVNEAQTAAAILGHNFRAT 245
Query: 261 YWARYVETLV 270
W L+
Sbjct: 246 DWYEDSYALL 255
>gi|239787476|emb|CAX83947.1| DNA uptake lipoprotein-like protein precursor [uncultured
bacterium]
Length = 289
Score = 118 bits (294), Expect = 1e-24, Method: Composition-based stats.
Identities = 64/243 (26%), Positives = 120/243 (49%), Gaps = 9/243 (3%)
Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90
+ L G +V L +Y + V +++ F A + F + R PF+
Sbjct: 14 LMILLAGCSSTPEEEVTL-------PPEVLYRQGVQAIQKNRFPVAVKRFQEVDRKHPFS 66
Query: 91 GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150
A ++ L + Y +Y++A S E ++ +P +V Y YY++ +++ + I D
Sbjct: 67 PWAVRAQLNLIYAHYMDEEYEEALSAAERFVRLHPRHPHVAYPYYMLALAHYKRIADPLR 126
Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
DQ TK ++ R+ +S Y + AR + + R++LAA+EV +GR+YL R +Y+AA
Sbjct: 127 DQGHTKQAEVAFRELIARFPDSDYAEEARRMLELCRDRLAAQEVVVGRFYLDRDQYIAAT 186
Query: 211 PRFQLVLA--NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
RF+ V+ +++ + EEA+ LV + + L L EA +++ Y G + +
Sbjct: 187 NRFRRVVENQDFNRTPYVEEALFGLVMSSLKLGLPQEALTYAAVLGHNYADGPFYPHARA 246
Query: 269 LVK 271
+V+
Sbjct: 247 MVE 249
>gi|254504434|ref|ZP_05116585.1| outer membrane assembly lipoprotein YfiO [Labrenzia alexandrii
DFL-11]
gi|222440505|gb|EEE47184.1| outer membrane assembly lipoprotein YfiO [Labrenzia alexandrii
DFL-11]
Length = 268
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 68/230 (29%), Positives = 125/230 (54%)
Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
SS+D + + + ++ + + + + F + + +P++ ++KSL+
Sbjct: 15 CSSKDEFDELALNDTPAEVLFNEGLALRAQGKLRDSTAKFEELDKLYPYSEYSKKSLVNL 74
Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
A++ Y+ GKY + + ++T YP + Y+ YLVG SY + + D+ DQ T+
Sbjct: 75 AYLNYTRGKYTETVTTANRFVTLYPGDPDSAYMLYLVGQSYYRQMPDITRDQATTERAAS 134
Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220
+++R+ S YV A+ + + ++QL KE+++GRYYL+R YVAA+ RF+ V+ NY
Sbjct: 135 AYGELLQRFPESEYVPDAQRKLLIVQDQLGGKEMQVGRYYLERRNYVAAVNRFKTVVNNY 194
Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
H EEA+ RL EAY AL ++ EA+ +++ +P W + TL+
Sbjct: 195 QTTRHVEEALFRLTEAYYALGVISEAQTAAAVLGHNFPDTQWYKDAYTLL 244
>gi|84501764|ref|ZP_00999936.1| Putative ComL lipoprotein [Oceanicola batsensis HTCC2597]
gi|84390385|gb|EAQ02944.1| Putative ComL lipoprotein [Oceanicola batsensis HTCC2597]
Length = 267
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 74/239 (30%), Positives = 125/239 (52%), Gaps = 1/239 (0%)
Query: 33 CFLVGWERQSSRDVYLD-SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91
L G S+ + + + ++Y++ L ++ A EYF + R +P++
Sbjct: 1 MALAGCGGTSTDGLGMGGQPIESFTAEQIYQRGEYELDSSDYDSAAEYFGEVERLYPYSE 60
Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151
A+++L+M AF + Y+++ + + +I YP + Y YL+ +SY I +V D
Sbjct: 61 WAKRALIMQAFSFHKDKNYEESRASAQRFIDFYPTDDDAAYAQYLLALSYYDQIDEVGRD 120
Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
Q T LQ + ++ERY S Y + A + + LAAKE+EIGRYYLKR + AAI
Sbjct: 121 QGLTFQALQSLRTVIERYPESDYARSAILKFDLAFDHLAAKEMEIGRYYLKRDHFPAAIN 180
Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
RF++V+ ++ H EA+ RLVEAY++L L DEA+ +++ + W L+
Sbjct: 181 RFRVVVEDFQTTTHTAEALHRLVEAYLSLGLTDEAQTAGAILGHNFQSTEWYEDSYRLL 239
>gi|119897308|ref|YP_932521.1| competence lipoprotein [Azoarcus sp. BH72]
gi|119669721|emb|CAL93634.1| probable competence lipoprotein precursor [Azoarcus sp. BH72]
Length = 269
Score = 117 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 59/247 (23%), Positives = 105/247 (42%), Gaps = 14/247 (5%)
Query: 27 FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86
F I L T +++Y +A + E + +A + F +
Sbjct: 13 FALIGALLLGACSSLPDEI----DETSGWNAQKLYAEAKASMTEGGYDRAIKLFEKLEAR 68
Query: 87 FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM-- 144
+P+ A+++ + A+ Y +G+ A + + +I +P NVDYVYYL G+
Sbjct: 69 YPYGRFAQQAQIEVAYAHYKSGEPGLALAAADRFIKLHPNHPNVDYVYYLKGLVNFNEDL 128
Query: 145 --------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196
D + + +V R+ S Y + +R + N LAA +V +
Sbjct: 129 GLLAGISNQDLSERDPKGAREAFDTFRELVTRFPESKYAEDSRQRMQYLVNSLAAHDVHV 188
Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
RYY +RG ++AA R Q +A Y EEA+ +V++Y AL L D + ++Q+
Sbjct: 189 ARYYYRRGAFIAAANRAQTAVATYPGTPATEEALYLMVKSYEALGLKDLQGDAERVLQKN 248
Query: 257 YPQGYWA 263
+P +
Sbjct: 249 FPNSVYY 255
>gi|254419865|ref|ZP_05033589.1| outer membrane assembly lipoprotein YfiO [Brevundimonas sp. BAL3]
gi|196186042|gb|EDX81018.1| outer membrane assembly lipoprotein YfiO [Brevundimonas sp. BAL3]
Length = 284
Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 62/240 (25%), Positives = 112/240 (46%), Gaps = 6/240 (2%)
Query: 33 CFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV 92
+ G + + R +Y L+++ ++ A +YF + R P++
Sbjct: 24 MTIAGCAGNA----RPKLAYEERPVEALYNTGYQRLEQRRWADAVDYFQEVERQHPYSDW 79
Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
AR+S+LM + Y Y A + + +I+ +P + + Y +Y+ + + I DV DQ
Sbjct: 80 ARRSILMQVYAFYQNNNYADAIAASDRFISLFPGNPSAAYAFYMKAVCNFEQITDVGRDQ 139
Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
L + + RY +PY A + + +QLA KE+ IGRYY + + +AA+ R
Sbjct: 140 GYANAALAGLKDVARRYPGTPYASDAAVKIDMVNDQLAGKEMNIGRYYQRANQPLAALNR 199
Query: 213 FQLVLAN--YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
++ V+AN + H EA+ RLVE + L L +EA +++ +P W L+
Sbjct: 200 YKAVIANPEFQRTSHTPEALYRLVEVNLQLGLKEEATRNGAVLGYNFPGSPWYAEAYALL 259
>gi|254464035|ref|ZP_05077446.1| DNA uptake lipoprotein [Rhodobacterales bacterium Y4I]
gi|206684943|gb|EDZ45425.1| DNA uptake lipoprotein [Rhodobacterales bacterium Y4I]
Length = 282
Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats.
Identities = 73/242 (30%), Positives = 122/242 (50%), Gaps = 1/242 (0%)
Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
+ + L G DSV + ++YE+ L + A YF + R +P
Sbjct: 14 VVLMAALAGCGGDGGAVKRGDSV-EAYSPDQIYERGEFELANRRPKDAVYYFAEIERLYP 72
Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
++ A+++++M AF +S Y+ + + + +I YP ++ Y YL+ +SY I +V
Sbjct: 73 YSEWAKQAVIMQAFAYHSTRDYENSRAAAQRFIDFYPADEDAAYAQYLLALSYYDQIDEV 132
Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
DQ T LQ + ++E Y +S Y A + + LA KE+EIGRYYL+RG Y +
Sbjct: 133 GRDQGLTFQALQALRTVIEVYPDSQYATSAILKFDLAFDHLAGKEMEIGRYYLRRGHYTS 192
Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
AI RF++V+ + H EA+ RLVEAY++L L EA+ +++ + W
Sbjct: 193 AINRFRVVVEEFQTTSHTPEALHRLVEAYLSLGLTAEAQTAAAILGHNFQSTEWYEDSYR 252
Query: 269 LV 270
L+
Sbjct: 253 LL 254
>gi|126735392|ref|ZP_01751138.1| competence lipoprotein ComL, putative [Roseobacter sp. CCS2]
gi|126715947|gb|EBA12812.1| competence lipoprotein ComL, putative [Roseobacter sp. CCS2]
Length = 283
Score = 116 bits (289), Expect = 4e-24, Method: Composition-based stats.
Identities = 67/221 (30%), Positives = 118/221 (53%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
D ++++E+ ++ N A F + R +P++ A+++L+M AF +
Sbjct: 35 EPLDDLTAQQIFERGERQIERGNPDDAAFTFGEIERLYPYSEFAQRALIMQAFAYHRDED 94
Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
Y + + + Y+ YP ++ Y YL+ +SY I +V DQ T LQ + ++E+Y
Sbjct: 95 YPNSRASAQRYLDFYPAEEDAAYAAYLLALSYYDQIDEVGRDQGLTFQALQSLRLVIEQY 154
Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
+S Y + + + LAAKE+EIGR+YLKRG Y+AA RF+ V+ ++ H EA
Sbjct: 155 PDSEYASTSVLKFDLAFDHLAAKEMEIGRFYLKRGNYIAASNRFRTVVEDFQTTSHTPEA 214
Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
+ RLVE+Y++L L++EA+ +++ Y W L+
Sbjct: 215 LHRLVESYLSLGLLEEAQTAGAILGYNYQSSEWYESSFALL 255
>gi|163738728|ref|ZP_02146142.1| competence lipoprotein ComL, putative [Phaeobacter gallaeciensis
BS107]
gi|161388056|gb|EDQ12411.1| competence lipoprotein ComL, putative [Phaeobacter gallaeciensis
BS107]
Length = 282
Score = 116 bits (289), Expect = 4e-24, Method: Composition-based stats.
Identities = 71/246 (28%), Positives = 124/246 (50%), Gaps = 1/246 (0%)
Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
TI + V L G + ++YE+ ++ A YF++
Sbjct: 10 TIGAVLLVAALSGCGGDGGAAKS-SQPLEGFTPEQIYERGEFEMERNRTEDAAFYFSEIE 68
Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
R +P++ A+++L+M A+ + Y+ + + + YI YP ++ Y YL+ +SY
Sbjct: 69 RLYPYSSWAKQALIMQAYAYHLGRDYEDSRAAAQRYIDFYPTEEDAAYAQYLLALSYYDQ 128
Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204
I +V DQ T LQ + ++E Y +S Y A + + LA KE+EIGRYYL++G
Sbjct: 129 IDEVGRDQGLTFQALQSLRTVIEVYPDSEYASSAILKFDLAFDHLAGKEMEIGRYYLRKG 188
Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
Y +A+ RF++V+ ++ H EA+ RLVEAY++L L++EA+ +++ Y W
Sbjct: 189 HYTSAVNRFRVVVEDFQTTTHTAEALHRLVEAYLSLGLVNEAQTAGAILGHNYQSTEWYE 248
Query: 265 YVETLV 270
L+
Sbjct: 249 DSFKLL 254
>gi|163741561|ref|ZP_02148952.1| competence lipoprotein ComL, putative [Phaeobacter gallaeciensis
2.10]
gi|161385295|gb|EDQ09673.1| competence lipoprotein ComL, putative [Phaeobacter gallaeciensis
2.10]
Length = 282
Score = 116 bits (288), Expect = 5e-24, Method: Composition-based stats.
Identities = 70/246 (28%), Positives = 123/246 (50%), Gaps = 1/246 (0%)
Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
TI + V L G + ++YE+ ++ A YF++
Sbjct: 10 TIGAVLLVAALSGCGGDGGAAKS-SQPLEGFTPEQIYERGEFEMERNRTEDAAFYFSEIE 68
Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
R +P++ A+++L+M A+ + Y+ + + + YI YP ++ Y YL+ +SY
Sbjct: 69 RLYPYSSWAKQALIMQAYAYHLGRDYEDSRAAAQRYIDFYPTEEDAAYAQYLLALSYYDQ 128
Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204
I +V DQ T LQ + ++E Y +S Y A + + LA KE+EIGRYYL++
Sbjct: 129 IDEVGRDQGLTFQALQSLRTVIEVYPDSEYASSAILKFDLAFDHLAGKEMEIGRYYLRKE 188
Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
Y +A+ RF++V+ ++ H EA+ RLVEAY++L L++EA+ +++ Y W
Sbjct: 189 HYTSAVNRFRVVVEDFQTTTHTAEALHRLVEAYLSLGLVNEAQTAGAILGHNYQSTEWYE 248
Query: 265 YVETLV 270
L+
Sbjct: 249 DSFKLL 254
>gi|157803367|ref|YP_001491916.1| hypothetical protein A1E_00915 [Rickettsia canadensis str. McKiel]
gi|157784630|gb|ABV73131.1| hypothetical protein A1E_00915 [Rickettsia canadensis str. McKiel]
Length = 247
Score = 115 bits (287), Expect = 6e-24, Method: Composition-based stats.
Identities = 74/253 (29%), Positives = 131/253 (51%), Gaps = 6/253 (2%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ L I L G + + + D + + +Y + ++ L+++ + KA E
Sbjct: 1 MKLAKLLSVLFIIGLSLSGCKSKKNSDDVVVPIP------TLYNEGIILLEKKKYKKAAE 54
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
F + P + ++ LM A+ + A +Y++A + + +I +P + ++ Y YYL
Sbjct: 55 EFGRVFYQHPGNEMTPQAELMQAYSLFLATQYEEAVDVLDMFINLHPANVDIAYAYYLKA 114
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
+SY +I DV +DQ T L I+E+++N+ Y A + + + LA KE+ +GR
Sbjct: 115 LSYYMLISDVNHDQSRTFLAKDSFKDIIEKFSNTKYAIDASLKIDLVNDHLAGKEMMVGR 174
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
+YLK+ +AAI RF+ V+ +Y H+ EA+ RL E+Y+ L L DEA++ S++ YP
Sbjct: 175 FYLKKKNPIAAINRFEEVINHYQTTSHSVEALYRLAESYMMLGLPDEAKKYASVLGYNYP 234
Query: 259 QGYWARYVETLVK 271
W Y LVK
Sbjct: 235 DSQWYSYAYKLVK 247
>gi|254474921|ref|ZP_05088307.1| lipoprotein [Ruegeria sp. R11]
gi|214029164|gb|EEB69999.1| lipoprotein [Ruegeria sp. R11]
Length = 282
Score = 115 bits (287), Expect = 6e-24, Method: Composition-based stats.
Identities = 70/246 (28%), Positives = 124/246 (50%), Gaps = 1/246 (0%)
Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
TI + + L G + ++YE+ ++ A YF +
Sbjct: 10 TIGAFLLIAALSGCGGDGGAAKSA-QPLEGFTPEQIYERGEFEMERNRTKDAAFYFAEIE 68
Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
R +P++ A+++L+M A+ + Y+++ + + YI YP ++ Y YL+ +SY
Sbjct: 69 RLYPYSSWAKQALIMQAYAYHLGRDYEESRAAAQRYIDFYPTEEDAAYAQYLLALSYYDQ 128
Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204
I +V DQ T LQ + ++E Y +S Y A + + LA KE+EIGRYYL++G
Sbjct: 129 IDEVGRDQGLTFQALQSLRTVIEVYPDSEYANSAILKFDLAFDHLAGKEMEIGRYYLRKG 188
Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
Y +A+ RF++V+ ++ H EA+ RLVEAY++L L++EA+ +++ Y W
Sbjct: 189 HYTSAVNRFRVVVEDFQTTTHTAEALHRLVEAYLSLGLVNEAQTAGAILGHNYQSTEWYE 248
Query: 265 YVETLV 270
L+
Sbjct: 249 DSFKLL 254
>gi|114766759|ref|ZP_01445696.1| competence lipoprotein ComL, putative [Pelagibaca bermudensis
HTCC2601]
gi|114541016|gb|EAU44073.1| competence lipoprotein ComL, putative [Roseovarius sp. HTCC2601]
Length = 275
Score = 115 bits (287), Expect = 7e-24, Method: Composition-based stats.
Identities = 73/246 (29%), Positives = 129/246 (52%), Gaps = 1/246 (0%)
Query: 26 IFFSIAVCFLVGWERQSSR-DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
I + + L G Q + + +++YE+ L ++ +A YF++
Sbjct: 2 IGVAFSAILLAGCTAQEREGYARGNIPLETFSAQQIYERGEYELDRRDGEQAAYYFSEVE 61
Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
R +P++ ++++L+M A+ ++ Y+ + S + YI YP ++ Y YL+ +SY
Sbjct: 62 RLYPYSEWSKRALIMQAYAFHTEKDYENSRSSAQRYIDFYPTDEDAAYAQYLLALSYYDQ 121
Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204
I +V DQ T LQ + ++ERY S Y + + + + LA KE+EIGRYYL+
Sbjct: 122 IEEVGRDQGLTFQALQALRTVIERYPESEYARSSILKFDLAFDHLAGKEMEIGRYYLRDK 181
Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
+ AAI RF++V+ ++ H EA+ RLVEAY++L L+ EA+ +++ Y W R
Sbjct: 182 HFGAAISRFRVVVEDFQTTTHTPEALHRLVEAYLSLGLVQEAQSAGAILGYNYQGSEWYR 241
Query: 265 YVETLV 270
TL+
Sbjct: 242 DSYTLL 247
>gi|117923624|ref|YP_864241.1| DNA uptake lipoprotein-like protein [Magnetococcus sp. MC-1]
gi|117607380|gb|ABK42835.1| DNA uptake lipoprotein-like protein [Magnetococcus sp. MC-1]
Length = 302
Score = 115 bits (286), Expect = 7e-24, Method: Composition-based stats.
Identities = 63/250 (25%), Positives = 115/250 (46%), Gaps = 7/250 (2%)
Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
+ V L G +DV D +Y AV ++++N+ A F
Sbjct: 10 KRLCMMVMLVLLLSGCSSTEEKDVQPD-----LAPEVMYRMAVNHVQKKNYKSAATIFTD 64
Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
+ PF+ A ++ L F Y ++ +A + +I +P V Y +Y++G+++
Sbjct: 65 LDQKHPFSPWAVRAQLNLIFATYKQDEFDEAVGHAKRFIRLHPRHPEVSYAFYMIGLAHY 124
Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
+ I+D DQ TK ++ R+ S Y A+ + RN++A +E+ +GRYY
Sbjct: 125 RQIKDPYRDQARTKEAATAFHEVINRFGESDYAWEAQKMLDFCRNRMAQQEIVVGRYYFD 184
Query: 203 RGEYVAAIPRFQLVLAN--YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
RGEY+AA+ RF ++ N + D+ EEA+ +V + + L L EA+ ++ Y G
Sbjct: 185 RGEYIAAMKRFNEIVDNPEFRDSLQTEEALFSMVLSALKLGLEQEAKNYAVVLGHNYKDG 244
Query: 261 YWARYVETLV 270
+ ++
Sbjct: 245 RLYAVAKDIL 254
>gi|126729262|ref|ZP_01745076.1| competence lipoprotein ComL, putative [Sagittula stellata E-37]
gi|126710252|gb|EBA09304.1| competence lipoprotein ComL, putative [Sagittula stellata E-37]
Length = 265
Score = 115 bits (286), Expect = 8e-24, Method: Composition-based stats.
Identities = 72/237 (30%), Positives = 123/237 (51%), Gaps = 1/237 (0%)
Query: 35 LVGWERQSSRDVYLD-SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93
+ G +DV D + +++YE+ + +++ YF + R +P++ A
Sbjct: 1 MSGCGELKRKDVGPDGQPLETYTAKQIYERGEYEMSRKDYEDGAFYFGEVERLYPYSDWA 60
Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153
+++L+M A+ + Y+ A + YI YP + Y YL+ +SY I V DQ
Sbjct: 61 KRALIMQAYSYHKNKDYENARGAAQRYIDFYPSDDDAAYAQYLLALSYYDQIELVGRDQG 120
Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213
T LQ + ++ERY +S Y + + + + LA KE+EIGRYYLKR + AAI RF
Sbjct: 121 LTFQALQALRAVIERYPDSEYARSSILKFDLAFDHLAGKEMEIGRYYLKRDHFGAAISRF 180
Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
++V+ ++ H EA+ RLVEAY++L L++EA+ +++ Y W L+
Sbjct: 181 RVVVEDFQTTTHTPEALHRLVEAYLSLGLVEEAQTAAAILGYNYQSTEWYEDSYQLL 237
>gi|110680523|ref|YP_683530.1| competence lipoprotein ComL, putative [Roseobacter denitrificans
OCh 114]
gi|109456639|gb|ABG32844.1| competence lipoprotein ComL, putative [Roseobacter denitrificans
OCh 114]
Length = 288
Score = 115 bits (286), Expect = 8e-24, Method: Composition-based stats.
Identities = 71/247 (28%), Positives = 123/247 (49%), Gaps = 5/247 (2%)
Query: 29 SIAVCFLVGWERQSSR-----DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
++ + + G R + + +++E+ L A YF +
Sbjct: 14 ALLIVGMAGCTSDPGRTTGTIFNPQEVPLEAFEAEQIFERGEFELTRNRPDDAAFYFAEI 73
Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
R +P++ AR++L+M AF + Y + S + +I YP+ + Y YL+ +SY
Sbjct: 74 ERLYPYSDWARRALIMQAFSYHQDQDYPNSRSAAQRFIDFYPDDDDAAYAQYLLALSYYD 133
Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
I +V DQ T LQ + + +ERY +S Y + + + + LA KE+EIGRYYL+R
Sbjct: 134 QIDEVGRDQGLTFQALQALRQTIERYPDSEYARSSILKFDLAFDHLAGKEMEIGRYYLRR 193
Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
+ AAI RF++V+ ++ H EA+ RLVEAY++L L D+A+ +++ Y W
Sbjct: 194 DHFAAAINRFRVVVEDFQTTSHTPEALHRLVEAYLSLGLTDQAQTAAAILGYNYQSTVWY 253
Query: 264 RYVETLV 270
+ L+
Sbjct: 254 QDSFALL 260
>gi|262276887|ref|ZP_06054680.1| outer membrane assembly lipoprotein YfiO [alpha proteobacterium
HIMB114]
gi|262223990|gb|EEY74449.1| outer membrane assembly lipoprotein YfiO [alpha proteobacterium
HIMB114]
Length = 277
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 59/253 (23%), Positives = 124/253 (49%), Gaps = 3/253 (1%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
++K + F V L+G + + + +Y A ++ N++++ E
Sbjct: 1 MFKKYHELIFIFLVLVLLGCS---KKANLVKKPETIPPLNILYTNAYKEFEKGNWTESVE 57
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
F + + ++ A ++ LM ++ Y + Q E++ Y + + YV ++
Sbjct: 58 LFQKVETRYSYSEWAPRATLMILYIHYDSNDSIQTLRYVEKFKKLYSGREEISYVDFIRA 117
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
M++ + I V DQ T++ L+ I+++Y NS Y K ++ + + QLA KE+ + R
Sbjct: 118 MTFYEQINVVSKDQTYTEVALKEFREIIKKYPNSIYAKESKLKIDLILEQLAGKEMYLAR 177
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
YY+ + ++++A+ R +VL+ Y ++ EA+ RLVE Y L ++EA++ +L+ +
Sbjct: 178 YYMNKNKWISALKRLNIVLSKYETTIYSTEALHRLVEIYYRLGNVNEAKKYAALLGYNFN 237
Query: 259 QGYWARYVETLVK 271
W + +VK
Sbjct: 238 DSDWYKKTYRIVK 250
>gi|83942732|ref|ZP_00955193.1| competence lipoprotein ComL, putative [Sulfitobacter sp. EE-36]
gi|83953972|ref|ZP_00962693.1| competence lipoprotein ComL, putative [Sulfitobacter sp. NAS-14.1]
gi|83841917|gb|EAP81086.1| competence lipoprotein ComL, putative [Sulfitobacter sp. NAS-14.1]
gi|83846825|gb|EAP84701.1| competence lipoprotein ComL, putative [Sulfitobacter sp. EE-36]
Length = 290
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 70/225 (31%), Positives = 121/225 (53%)
Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
+ + ++YE+ L + ++A EYF++ R +P++ A+++L+M AF +
Sbjct: 38 NPQEIPLETYSAEQIYERGEFELNRKRPAEAAEYFSEIERLYPYSEWAKRALIMQAFAYH 97
Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
Y + S + YI +P+ + Y YL+ +SY I +V DQ T LQ + R+
Sbjct: 98 QDQDYPNSRSAAQRYIDFFPDDDDASYASYLLALSYYDQIDEVGRDQGLTFQALQALRRV 157
Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
+E Y +S Y + + + + LA KE+E+GRYYL+R Y A+I RF++V+ ++ H
Sbjct: 158 IEDYPDSEYARSSVLKFDLAFDHLAGKEMEVGRYYLRRKHYTASINRFRVVVEDFQTTTH 217
Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
EA+ RLVEAY++L L DEA+ +++ Y W L+
Sbjct: 218 TAEALHRLVEAYLSLGLTDEAQTAGAILGHNYQSTEWYEASYKLL 262
>gi|254460220|ref|ZP_05073636.1| competence lipoprotein ComL [Rhodobacterales bacterium HTCC2083]
gi|206676809|gb|EDZ41296.1| competence lipoprotein ComL [Rhodobacteraceae bacterium HTCC2083]
Length = 289
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 70/247 (28%), Positives = 119/247 (48%), Gaps = 6/247 (2%)
Query: 30 IAVCFLVGWERQSSRDV------YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
+ + G V D ++YE+ L+ + A YF +
Sbjct: 15 VLTLTVAGCSGGGGGGVSRFLGGKSTIPLDTFTAEQIYERGEFELERKRDDDAAFYFGEV 74
Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
R +P++ A++ L+M AF + Y+ + + + +I YP + Y YL+ +SY
Sbjct: 75 ERLYPYSEWAKRGLIMQAFAYHKDKDYENSRASAQRFIDVYPTDDDAAYAQYLLALSYYD 134
Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
I D+ DQ T LQ + ++ERY +S Y A + + LA KE+EIGRYYL+R
Sbjct: 135 QIEDLGRDQGLTFQALQGLRTVIERYPDSEYTSSAILKFDLAFDHLAGKEMEIGRYYLRR 194
Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
Y ++I RF++V+ ++ H EA+ RLVE+Y++L L +EA+ +++ Y W
Sbjct: 195 DHYTSSINRFRVVVEDFQTTTHTPEALHRLVESYLSLGLNEEAQTAGAILGHNYKSTEWY 254
Query: 264 RYVETLV 270
L+
Sbjct: 255 EDSFKLL 261
>gi|51473383|ref|YP_067140.1| lipoprotein [Rickettsia typhi str. Wilmington]
gi|51459695|gb|AAU03658.1| probable lipoprotein [Rickettsia typhi str. Wilmington]
Length = 251
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 74/253 (29%), Positives = 130/253 (51%), Gaps = 6/253 (2%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ L F + L G + + + + + + +Y + ++ L ++ + KA E
Sbjct: 1 MKLTKLLSAFLVIGLILSGCKSKKNSNDIVVPIA------TLYNEGIILLDKKKYKKAAE 54
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
F + P + ++ LM A+ + A +Y++A + + +I +P + ++ Y YYL
Sbjct: 55 EFGKIFYQHPGNEMTPQAELMQAYALFLAAQYEEAVDILDMFINLHPANVDIAYAYYLKA 114
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
+SY +I DV +DQ T L ++ ++ N+ Y A + + + LA KE+ IGR
Sbjct: 115 LSYYMLISDVNHDQSRTFLSKDSFEDVITKFPNTKYAIDASLKIDLVNDHLAGKEMMIGR 174
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
+YLK+ +AAI RF+ V+ NY H+ EA+ RLVE+Y+ L L DEA++ S++ YP
Sbjct: 175 FYLKKKNPIAAINRFEEVIDNYQTTYHSVEALYRLVESYMMLGLHDEAKKYASVLGYNYP 234
Query: 259 QGYWARYVETLVK 271
W Y LVK
Sbjct: 235 DSKWYSYAYRLVK 247
>gi|260426152|ref|ZP_05780131.1| tetratricopeptide TPR_2 repeat protein [Citreicella sp. SE45]
gi|260420644|gb|EEX13895.1| tetratricopeptide TPR_2 repeat protein [Citreicella sp. SE45]
Length = 286
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 73/249 (29%), Positives = 128/249 (51%), Gaps = 1/249 (0%)
Query: 23 ALTIFFSIAVCFLVGW-ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
L I + + L G ++ + + +++E+ L ++ +A YF
Sbjct: 8 KLVIGLAFSAIILAGCTAQERDGYAKGNIPLETFSAEQIFERGEYELDRKDGERAAYYFG 67
Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
+ R +P++ ++++L+M A+ + Y+ + S + YI YP + Y YL+ +SY
Sbjct: 68 EVERLYPYSDWSKRALIMQAYAYHLEKDYENSRSSAQRYIDFYPTDDDAAYAQYLLALSY 127
Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
I +V DQ T LQ + ++ERY +S Y + + + + LAAKE+EIGRYYL
Sbjct: 128 YDQIEEVGRDQGLTFQALQALRTVIERYPDSEYARSSILKFDLAFDHLAAKEMEIGRYYL 187
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
+R Y AAI RF+ V+ ++ H EA+ RLVEAY++L L++EA+ +++ Y
Sbjct: 188 RRQHYGAAINRFRSVVEDFQTTTHTPEALHRLVEAYLSLGLVNEAQTAGAILGYNYQGTV 247
Query: 262 WARYVETLV 270
W L+
Sbjct: 248 WYADTYALL 256
>gi|254455886|ref|ZP_05069315.1| DNA uptake lipoprotein [Candidatus Pelagibacter sp. HTCC7211]
gi|207082888|gb|EDZ60314.1| DNA uptake lipoprotein [Candidatus Pelagibacter sp. HTCC7211]
Length = 283
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 76/247 (30%), Positives = 127/247 (51%), Gaps = 1/247 (0%)
Query: 25 TIFFSIAVCFLVGWERQSS-RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
F I L+ ++ ++ + + E Y++ + L+ + A + FN+
Sbjct: 4 FFLFIILFAALISCAKKEEFKESIIKEKSLDLQVLEAYQEGMKNLESGDVIYAAKKFNEA 63
Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
FP + A KS LM+A+ Y+ Y + E ++ YP SKN+DYVYYL+G+SY +
Sbjct: 64 EILFPQSDWAPKSALMAAYSYYTQDYYADTIAELERFLRVYPLSKNLDYVYYLLGVSYYE 123
Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
I D D ++ +Y +++ Y N+ Y A F + + + LAAKE+ IGRYY +
Sbjct: 124 QIVDEKKDLQSIIKAKKYFEILIQNYPNTNYSLDAEFKIELVNDTLAAKEMYIGRYYFDK 183
Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
+++ AI RF+ V+ NY +AEEA+ RLVE + L L DEA++ +L+ Y W
Sbjct: 184 KKWIPAINRFKTVIDNYDTTLYAEEALHRLVEVHYILGLKDEAKKYANLLGYNYQSSIWY 243
Query: 264 RYVETLV 270
++
Sbjct: 244 EKTYSIF 250
>gi|89055239|ref|YP_510690.1| competence lipoprotein ComL, putative [Jannaschia sp. CCS1]
gi|88864788|gb|ABD55665.1| competence lipoprotein ComL putative [Jannaschia sp. CCS1]
Length = 302
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 70/220 (31%), Positives = 115/220 (52%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
+ +Y++A L+ A E F + R P++ A ++L+M+AF + G Y
Sbjct: 55 PLEQLDAETIYQQAEFELERGRADNAAELFIEVERLHPYSAWAERALIMAAFAYHEDGDY 114
Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
+ A + Y+ YP +++ Y YL+ +SY I V DQ T LQ + ++ERY
Sbjct: 115 EAARVAAQRYLDFYPGNEDAAYAQYLLALSYYDQIDQVGRDQGVTFQALQALRVVIERYP 174
Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
+S YV+ A + + LA KE+E+GRYYL+R Y +AI RF++V+ + H EA+
Sbjct: 175 DSDYVQDAILRFDLAFDHLAGKEMEVGRYYLRREHYTSAINRFRVVVEEFQTTSHTPEAL 234
Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
RLVEAY+AL L DEA+ +++ + + +
Sbjct: 235 LRLVEAYLALGLTDEAQTAGAILGYNFQSSPFYDDAFRQL 274
>gi|260577083|ref|ZP_05845061.1| outer membrane assembly lipoprotein YfiO [Rhodobacter sp. SW2]
gi|259020661|gb|EEW23979.1| outer membrane assembly lipoprotein YfiO [Rhodobacter sp. SW2]
Length = 280
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 82/247 (33%), Positives = 135/247 (54%), Gaps = 5/247 (2%)
Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQ-NFSKAYEYFNQC 83
+ ++ V L G +++V D E+Y++ L+ + ++A YF +
Sbjct: 10 LLGTALIVATLAGCGGGGTKEV----PLDSLTAEEIYKRGEYALETRPKPTEAIRYFTEV 65
Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
R +P+ A+++L+M AF + + KY++A S + Y+ YP ++ Y YL+ +SY
Sbjct: 66 ERLYPYTEWAKRALIMQAFTYHKSKKYEEARSAAQRYLDYYPGDEDAGYAKYLLALSYYD 125
Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
I DV DQ T LQ + ++E Y ++ Y + A + +QLAAKE+EIGRYYLKR
Sbjct: 126 QIDDVGRDQGVTFQALQALRAVIEEYPDTEYARSAILKFDMAFDQLAAKEMEIGRYYLKR 185
Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
G Y AAI RF++V+ ++ H EA+ RLVEAY+AL L DEA+ +++ Y +
Sbjct: 186 GNYSAAINRFRVVVQDFQTTTHTAEALHRLVEAYLALGLTDEAQTAGAILGYNYQASPFY 245
Query: 264 RYVETLV 270
+ L+
Sbjct: 246 QDSYKLL 252
>gi|319408816|emb|CBI82473.1| competence lipoprotein precursor [Bartonella schoenbuchensis R1]
Length = 292
Score = 114 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 85/233 (36%), Positives = 129/233 (55%)
Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
+ + V + +Y +A+ L F +A + F+ + + + RKSL+
Sbjct: 34 SKDTDAFNPAMHVLIMDPPDVLYNQALTNLDLGRFDEALKKFSIIEKQYAYTEWGRKSLV 93
Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
M AFV Y KY A S+ + YIT YP + + Y YY+VG+S IRDV DQR TK
Sbjct: 94 MGAFVSYRLAKYDDAISMAQRYITLYPNASDSAYAYYIVGLSSFHQIRDVTRDQRDTKRA 153
Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
+ M ++ERY NS YVK A+ + GR QLA KE+++GRYY + +Y+AA RF+ V+
Sbjct: 154 IAAMQLLIERYPNSEYVKDAKDKIRFGREQLAGKEMQVGRYYEEGRQYLAASRRFRTVVE 213
Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
YSD EEA+ RL E +AL L+ EA+ +++ YP+ W ++ L++
Sbjct: 214 EYSDTNQIEEALFRLTEVNLALGLITEAQTAAAVLGRNYPESKWYKFSYDLLQ 266
>gi|310814891|ref|YP_003962855.1| tetratricopeptide TPR_2 repeat protein [Ketogulonicigenium vulgare
Y25]
gi|308753626|gb|ADO41555.1| tetratricopeptide TPR_2 repeat protein [Ketogulonicigenium vulgare
Y25]
Length = 289
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 74/233 (31%), Positives = 117/233 (50%)
Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
S + D +V++ L E A +F + R +P++ AR+ L
Sbjct: 29 CSSNESSVLRQPGALDAYSAEQVFDLGEQQLNENRLDDAAFFFGEIERLYPYSSWARRGL 88
Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
+M AF + A Y+ + S + Y+ YP ++ Y YL+ +SY I D+ DQ T
Sbjct: 89 IMQAFAYHRARDYENSRSAAQRYVDFYPTDEDAAYAQYLLALSYYDQIDDIGRDQGVTFR 148
Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
LQ + R++E Y +S Y A + + LA KE+E+GRYYL RG + AAI RF++V+
Sbjct: 149 ALQELRRVIELYPDSEYATAAVQKFDLAFDHLAGKEMEVGRYYLSRGNFTAAISRFRVVV 208
Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
++ + EA+ RLVEAY+AL L DEAR +++ Y + L+
Sbjct: 209 EDFQTTTYTPEALMRLVEAYMALGLTDEARSAAAILGHNYQSTPFYADAYALL 261
>gi|254292784|ref|YP_003058807.1| outer membrane assembly lipoprotein YfiO [Hirschia baltica ATCC
49814]
gi|254041315|gb|ACT58110.1| outer membrane assembly lipoprotein YfiO [Hirschia baltica ATCC
49814]
Length = 260
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 78/254 (30%), Positives = 133/254 (52%), Gaps = 3/254 (1%)
Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
L + S + + + D + ++Y +A + + + +A
Sbjct: 3 NKRNTFLLVTISASALIMTSCSSSDRKK---DLAYIEKPVEQLYNEAGRSVDRKQWDRAA 59
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
F + R P++ A +++LM+A+VQY + +Y + + +Y YP SK+ Y YYL+
Sbjct: 60 LEFQEVQRQHPYSEWAERAMLMTAYVQYKSRQYAEVEASAGQYTALYPSSKSAAYAYYLI 119
Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
+S+ I DV DQ T+L L + +V RY + Y + A + + R+QLA KE+E+G
Sbjct: 120 ALSHFDQITDVGRDQGRTELALSALQDVVRRYPTTEYARDAELKIDMVRDQLAGKEMEVG 179
Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
RYYLK E++AAI RF+ V+ Y HA EA+ RLVEAY+++ L+ +A+ +++ Y
Sbjct: 180 RYYLKSSEFLAAINRFKRVVDEYETTTHAPEALHRLVEAYLSIGLVGQAQAAAAVLGHNY 239
Query: 258 PQGYWARYVETLVK 271
P W R L++
Sbjct: 240 PSSRWYRDSYKLME 253
>gi|260434236|ref|ZP_05788207.1| tetratricopeptide TPR_2 repeat protein [Silicibacter
lacuscaerulensis ITI-1157]
gi|260418064|gb|EEX11323.1| tetratricopeptide TPR_2 repeat protein [Silicibacter
lacuscaerulensis ITI-1157]
Length = 287
Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats.
Identities = 71/246 (28%), Positives = 122/246 (49%), Gaps = 4/246 (1%)
Query: 29 SIAVCFLVGWER----QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
+ L ++ + +++ + L + A YF++
Sbjct: 14 ILLALTLTACGNAGGLFGNKGADRSQNLEGYTPEQIFTRGEFELSQNRPEDAAWYFSEVE 73
Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
R +P++ A++SL+M AF +S Y+++ + + YI YP ++ Y YL+ +SY
Sbjct: 74 RLYPYSDWAKRSLIMQAFAFHSDKNYEESRAAAQRYIDFYPTDEDAAYAQYLLALSYYDQ 133
Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204
I +V DQ T LQ + ++E Y +S Y A + + LA KE+EIGRYYL++
Sbjct: 134 IDEVGRDQGLTFQALQALRTVIEVYPDSEYATSAVLKFDLAFDHLAGKEMEIGRYYLRQD 193
Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
Y AAI RF++V+ ++ H EA+ RL+EAY+AL L+DEA+ +++ Y W
Sbjct: 194 HYAAAINRFRVVVEDFQTTTHTAEALYRLIEAYLALGLVDEAQSAGAILGYNYQSSEWYD 253
Query: 265 YVETLV 270
L+
Sbjct: 254 AAYKLL 259
>gi|119387190|ref|YP_918245.1| putative ComL lipoprotein [Paracoccus denitrificans PD1222]
gi|119377785|gb|ABL72549.1| putative ComL lipoprotein [Paracoccus denitrificans PD1222]
Length = 280
Score = 113 bits (281), Expect = 3e-23, Method: Composition-based stats.
Identities = 71/248 (28%), Positives = 129/248 (52%), Gaps = 4/248 (1%)
Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKE-QNFSKAYEYFNQC 83
+ +++ L G + + + E+Y++ L+ + A +YF +
Sbjct: 9 LVAAVLSLGLLAGCSGGAGKK---PESFENFTAEEIYKRGEYELENSRRPKDAVQYFTEV 65
Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
R +P++ A+++L+M A+ + A Y++A + +I YP ++ Y YL+ +SY
Sbjct: 66 ERLYPYSEWAKRALIMQAYSYHRARDYEEARGAAQRFIDTYPGDEDAAYAKYLLALSYYD 125
Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
I ++ DQ T LQ + ++E+Y ++ Y + A + + LAAKE+EIGRYYLKR
Sbjct: 126 QIDEIGRDQGLTFQALQSLREVIEQYPDTEYARSAILKFDLAFDHLAAKEMEIGRYYLKR 185
Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
G Y AAI RF++V+ + H EA+ RL EAY+AL L DEA+ +++ + +
Sbjct: 186 GHYTAAINRFRVVVEEFQTTSHTPEALMRLTEAYLALGLNDEAQTAGAILGHNFQSSPFY 245
Query: 264 RYVETLVK 271
+ ++
Sbjct: 246 QDAFAQLR 253
>gi|15604057|ref|NP_220572.1| hypothetical protein RP183 [Rickettsia prowazekii str. Madrid E]
gi|18203676|sp|Q9ZDY1|Y183_RICPR RecName: Full=UPF0169 lipoprotein RP183; Flags: Precursor
gi|3860748|emb|CAA14649.1| unknown [Rickettsia prowazekii]
gi|292571778|gb|ADE29693.1| DNA uptake lipoprotein [Rickettsia prowazekii Rp22]
Length = 251
Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats.
Identities = 72/253 (28%), Positives = 127/253 (50%), Gaps = 6/253 (2%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ L + L G + + + + + +Y + ++ L ++ + KA E
Sbjct: 1 MKLTKLLSALLVIGLVLGGCKSKKDSNDIVAPIA------TLYNEGIILLDKKKYKKAAE 54
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
F + P + ++ LM A+ + A +Y++A + +I +P + ++ Y YYL
Sbjct: 55 EFGKIFYQHPGNEMTPQAELMQAYSLFLAAQYEEAVDILNMFINLHPANIDIAYAYYLKA 114
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
+SY +I DV +DQ T L ++ ++ N+ Y + + + + LA KE+ IGR
Sbjct: 115 LSYYMLISDVNHDQSRTFLSKDSFEDVITKFPNTKYAIDSSLKIDLVNDHLAGKEMMIGR 174
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
+YLK+ +AAI RF+ V+ NY H+ EA+ RLVE+Y+ L L DEA++ S++ YP
Sbjct: 175 FYLKKKNPMAAINRFEEVIDNYQTTYHSVEALYRLVESYMMLGLHDEAKKYTSVLGYNYP 234
Query: 259 QGYWARYVETLVK 271
W Y LVK
Sbjct: 235 NSKWYSYAYRLVK 247
>gi|301629104|ref|XP_002943688.1| PREDICTED: hypothetical protein LOC100490343 [Xenopus (Silurana)
tropicalis]
Length = 475
Score = 112 bits (279), Expect = 5e-23, Method: Composition-based stats.
Identities = 60/261 (22%), Positives = 109/261 (41%), Gaps = 17/261 (6%)
Query: 19 LYKFALTIFFSIAVC-FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
+ + L +F ++ + G S T ++Y +A + + KA
Sbjct: 211 MLRAPLPLFSALLAAGLIAGCASTSEDK------TANWSPDKIYSEAREEMNSGAYDKAV 264
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY----- 132
+ +A+++ L A+ Q+ G+ QA + E ++ +P S +DY
Sbjct: 265 PLLEKLEGRAAGTPLAQQAQLDKAYAQFKNGEKAQAIATLERFLKLHPASPAIDYALYLR 324
Query: 133 -----VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
L S+ DQ+A K + + R+ +S Y AR +T N
Sbjct: 325 GLVNFNDNLGIFSWLSRQDLSERDQKAAKDSFESFRDLTTRFPDSRYAPDARQRMTYIVN 384
Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
LA EV + RYY +RG YVAA+ R Q +++Y + AEEA+ L+ +Y AL +
Sbjct: 385 ALAQYEVHVARYYYERGAYVAAVGRAQQAISDYQNVPAAEEALYILIRSYDALGMAQLRD 444
Query: 248 EVVSLIQERYPQGYWARYVET 268
+ + ++ YP+ + +
Sbjct: 445 DTMRVMNASYPESGYVKNGFK 465
>gi|71082726|ref|YP_265445.1| putative competence lipoprotein ComL [Candidatus Pelagibacter
ubique HTCC1062]
gi|71061839|gb|AAZ20842.1| putative competence lipoprotein ComL [Candidatus Pelagibacter
ubique HTCC1062]
Length = 282
Score = 112 bits (279), Expect = 5e-23, Method: Composition-based stats.
Identities = 63/239 (26%), Positives = 117/239 (48%)
Query: 32 VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91
F+ ++ + + V + Y++ L+ + A + FN+ FP +
Sbjct: 14 FTFIWSCGDKTKKISEIVEVDMEMQMSDAYKEGYFELQRGDVLLAAKKFNEAELLFPQSP 73
Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151
A KS +M+A+ Y+ Y A E Y+ YP K+ Y ++L+GMS+ + I D D
Sbjct: 74 WAAKSAIMAAYAYYTQYYYSDAIFELERYLVTYPNHKDKVYAHFLLGMSFYEQIVDEKKD 133
Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
++ + I+ Y ++ + A+F + + LAAKE+ I RYYLK+ +++ A+
Sbjct: 134 LKSILDSKEQFETIIRDYPSTEFAMDAKFKIDLINEILAAKEMYIARYYLKKTKWIPALN 193
Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
RF+ V+ +Y+ + EEA+ RLVE L L++E+++ S + Y W + +
Sbjct: 194 RFKTVVKDYNTTIYTEEALHRLVEINYRLGLINESKKYASTLGYNYQSSDWYKNSYKVF 252
>gi|91762852|ref|ZP_01264817.1| putative competence lipoprotein ComL [Candidatus Pelagibacter
ubique HTCC1002]
gi|91718654|gb|EAS85304.1| putative competence lipoprotein ComL [Candidatus Pelagibacter
ubique HTCC1002]
Length = 282
Score = 112 bits (278), Expect = 7e-23, Method: Composition-based stats.
Identities = 62/239 (25%), Positives = 117/239 (48%)
Query: 32 VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91
F+ ++ + + V + Y++ L+ + A + FN+ FP +
Sbjct: 14 FTFIWSCGDKTKKISEIVEVDMEMQMSDAYKEGYFELQRGDVLLAAKKFNEAELLFPQSP 73
Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151
A KS +M+A+ Y+ Y A E Y+ YP K+ Y ++L+GMS+ + I D D
Sbjct: 74 WAAKSAIMAAYAYYTQDYYGDAIFELERYLVTYPNHKDKVYAHFLLGMSFYEQIVDEKKD 133
Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
++ + ++ Y ++ + A+F + + LAAKE+ I RYYLK+ +++ A+
Sbjct: 134 LKSILDSKEQFETLIRDYPSTEFAMDAKFKIDLINEILAAKEMYIARYYLKKTKWIPALN 193
Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
RF+ V+ +Y+ + EEA+ RLVE L L++E+++ S + Y W + +
Sbjct: 194 RFKTVVKDYNTTIYTEEALHRLVEINYRLGLINESKKYASTLGYNYQSSDWYKNSYKVF 252
>gi|163732123|ref|ZP_02139569.1| competence lipoprotein ComL, putative [Roseobacter litoralis Och
149]
gi|161394421|gb|EDQ18744.1| competence lipoprotein ComL, putative [Roseobacter litoralis Och
149]
Length = 273
Score = 112 bits (278), Expect = 7e-23, Method: Composition-based stats.
Identities = 72/241 (29%), Positives = 120/241 (49%), Gaps = 5/241 (2%)
Query: 35 LVGWERQSSR-----DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89
+ G R + + +++E+ L A YF + R +P+
Sbjct: 5 IAGCTSDPGRTTGTFFNPQEVPLEAFEAEQIFERGEFELTRNRPDDAAFYFAEIERLYPY 64
Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
+ AR++L+M AF + Y + S + +I YP+ + Y YL+ +SY I +V
Sbjct: 65 SDWARRALIMQAFSYHQDQDYPNSRSAAQRFIDFYPDDDDAAYAQYLLALSYYDQIDEVG 124
Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
DQ T LQ + + +ERY +S Y + + + + LA KE+EIGRYYL+R + AA
Sbjct: 125 RDQGLTFQALQALRQTIERYPDSEYARASILKFDLAFDHLAGKEMEIGRYYLRRDHFAAA 184
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
I RF++V+ ++ H EA+ RLVEAY++L L DEA+ +++ Y W + L
Sbjct: 185 INRFRVVVEDFQTTSHTPEALHRLVEAYLSLGLTDEAQTAGAILGYNYQSTIWYQDSFAL 244
Query: 270 V 270
+
Sbjct: 245 L 245
>gi|315498683|ref|YP_004087487.1| outer membrane assembly lipoprotein yfio [Asticcacaulis excentricus
CB 48]
gi|315416695|gb|ADU13336.1| outer membrane assembly lipoprotein YfiO [Asticcacaulis excentricus
CB 48]
Length = 302
Score = 111 bits (277), Expect = 9e-23, Method: Composition-based stats.
Identities = 70/229 (30%), Positives = 120/229 (52%)
Query: 43 SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102
V + R +Y + L E+++++A +YF + R P++ +R+S++M +
Sbjct: 37 KPKQRTRLVYEERPVEALYNTGMQRLDEKSWNEAVDYFEEVERQHPYSEWSRRSIIMEIY 96
Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
Y A Y ++ + E +I YP S Y YY+ ++Y + I DV DQ T+ Y+
Sbjct: 97 AHYQANDYNESTAAAERFIKLYPGSPLTPYAYYMRAINYFEQIVDVGRDQAYTETAQAYL 156
Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
IV+RY + Y + A+ + + +QLA KE+EIGR+YL + + +AAI RF+ V+ Y
Sbjct: 157 REIVQRYPGTEYARDAQVKLDMVYDQLAGKEMEIGRFYLAQNQPLAAIGRFKTVITRYQT 216
Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
H EA+ RLVEA + + + DEA +++ Y W L++
Sbjct: 217 TSHTPEALYRLVEANLMMGITDEANRNAAVLGYNYAGDRWYTAAYKLMQ 265
>gi|254511506|ref|ZP_05123573.1| tetratricopeptide TPR_2 repeat protein [Rhodobacteraceae bacterium
KLH11]
gi|221535217|gb|EEE38205.1| tetratricopeptide TPR_2 repeat protein [Rhodobacteraceae bacterium
KLH11]
Length = 286
Score = 111 bits (277), Expect = 9e-23, Method: Composition-based stats.
Identities = 70/245 (28%), Positives = 123/245 (50%), Gaps = 3/245 (1%)
Query: 29 SIAVCFLVGWER---QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85
+ L S + + + +++ + L + A YF++ R
Sbjct: 14 LLLATVLTACGDGGLFSKKGADRNQNLEGYTPEQIFTRGEYELSQDRSDDAAWYFSEVER 73
Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
+P++ A+++L+M AF ++ Y ++ + + YI YP ++ Y YL+ +SY I
Sbjct: 74 LYPYSDWAKRALIMQAFSYHNDKNYAESRAAAQRYIDFYPTDEDAAYAQYLLALSYYDQI 133
Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
+V DQ T LQ + ++E Y +S Y A + + LA KE+EIGRYYL++
Sbjct: 134 DEVGRDQGLTFQALQALRTVIEVYPDSEYATSAVLKFDLAFDHLAGKEMEIGRYYLRQDH 193
Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
+ AAI RF++V+ ++ H EA+ RL+EAY+AL L+DEA+ +++ Y W
Sbjct: 194 FTAAINRFRVVVEDFQTTSHTAEALYRLIEAYLALGLVDEAQTAGAILGYNYQSSEWYDA 253
Query: 266 VETLV 270
TL+
Sbjct: 254 GYTLL 258
>gi|126461561|ref|YP_001042675.1| TPR repeat-containing protein [Rhodobacter sphaeroides ATCC 17029]
gi|221638526|ref|YP_002524788.1| hypothetical protein RSKD131_0427 [Rhodobacter sphaeroides KD131]
gi|332557550|ref|ZP_08411872.1| Tetratricopeptide TPR_2 repeat protein precursor [Rhodobacter
sphaeroides WS8N]
gi|126103225|gb|ABN75903.1| Tetratricopeptide TPR_2 repeat protein [Rhodobacter sphaeroides
ATCC 17029]
gi|221159307|gb|ACM00287.1| Tetratricopeptide TPR_2 repeat protein precursor [Rhodobacter
sphaeroides KD131]
gi|332275262|gb|EGJ20577.1| Tetratricopeptide TPR_2 repeat protein precursor [Rhodobacter
sphaeroides WS8N]
Length = 278
Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 73/247 (29%), Positives = 129/247 (52%), Gaps = 5/247 (2%)
Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQ-NFSKAYEYFNQC 83
+ ++ V + G S ++ + ++Y++ L+ + +A YF++
Sbjct: 8 LLGTALCVALVAGCGGGSQKE----PPLENFTAEQIYQRGEYELEARTKPDRAIRYFSEV 63
Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
R +P+ A+++L+M A+ + A Y++A + ++ YP ++ Y YL+ +SY
Sbjct: 64 ERLYPYTEWAKRALIMQAYSYHKAKDYEEARGAAQRFLDFYPGDEDAAYAQYLLALSYYD 123
Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
I +V DQ T LQ + ++E Y S Y + A + + LAAKE+EIGRYYLKR
Sbjct: 124 QIDEVGRDQGLTFQALQALRVVIEDYPESEYAQSAILKFDLAFDHLAAKEMEIGRYYLKR 183
Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
G Y AAI RF+ V+ ++ H EA+ RLVE+Y+AL L++EA+ +++ Y +
Sbjct: 184 GHYTAAINRFRTVVEDFQTTTHTAEALHRLVESYLALGLVNEAQTAGAILGHNYRSSPFY 243
Query: 264 RYVETLV 270
L+
Sbjct: 244 EDSYKLL 250
>gi|159044955|ref|YP_001533749.1| hypothetical protein Dshi_2414 [Dinoroseobacter shibae DFL 12]
gi|157912715|gb|ABV94148.1| conserved hypothetical protein [Dinoroseobacter shibae DFL 12]
Length = 279
Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 78/240 (32%), Positives = 121/240 (50%), Gaps = 4/240 (1%)
Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90
L Q L+ ++ +A L+ N +A YF + R +PF+
Sbjct: 16 LAVILAACGSQQPEFPALEE----SPPDVIFNRAEFELQANNLDEAARYFGEVERLYPFS 71
Query: 91 GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150
A+++L+M AF + +Y+ + + + Y+ YP ++ Y YL+ +SY I DV
Sbjct: 72 EFAKRALIMQAFTYHRNREYESSRAAAQRYLDFYPADEDAAYAQYLLALSYYDQIDDVGR 131
Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
DQ T LQ + ++E Y S Y K + + N LAAKE+EIGRYYLKRG Y AAI
Sbjct: 132 DQGLTFQALQALRTVIEVYPESSYAKSSILKFDLAFNHLAAKEMEIGRYYLKRGHYAAAI 191
Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
RF++V+ ++ H EA+ RLVEAY++L L EA+ +++ Y W L+
Sbjct: 192 NRFRVVVEDFQTTTHTPEALHRLVEAYLSLGLEGEAQTAGAILGFNYQATDWYEDSFRLL 251
>gi|239948179|ref|ZP_04699932.1| DNA uptake lipoprotein [Rickettsia endosymbiont of Ixodes
scapularis]
gi|239922455|gb|EER22479.1| DNA uptake lipoprotein [Rickettsia endosymbiont of Ixodes
scapularis]
Length = 249
Score = 111 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 71/242 (29%), Positives = 126/242 (52%), Gaps = 6/242 (2%)
Query: 30 IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89
+ G + + + D + + +Y + V L+++ + KA E F + P
Sbjct: 12 VIGLVFSGCKSKKNSDDIVVPIP------TLYNEGVTLLEKKKYKKAAEEFGRVFYQHPG 65
Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
+ ++ LM A+ + A +Y++A + + +I +P + ++ Y YYL +SY +I DV
Sbjct: 66 NEMTPQAELMQAYSLFLAAQYEEAVDVLDMFINLHPANVDITYAYYLKALSYYMLISDVN 125
Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
+DQ T L ++ ++ N+ Y + + + + LA KE+ +GR+YLK+ +AA
Sbjct: 126 HDQSRTFLAKDSFEDVIAKFPNTKYAIDSSLKIDLVNDHLAGKEMMVGRFYLKKKNPMAA 185
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
I RF+ V+ NY H+ EA+ RLVE+Y+ L L DEA++ S++ YP W Y L
Sbjct: 186 INRFEEVIDNYQTTSHSVEALYRLVESYMMLGLPDEAKKYASVLGYNYPDSQWYSYAYRL 245
Query: 270 VK 271
VK
Sbjct: 246 VK 247
>gi|84516947|ref|ZP_01004305.1| competence lipoprotein ComL, putative [Loktanella vestfoldensis
SKA53]
gi|84509415|gb|EAQ05874.1| competence lipoprotein ComL, putative [Loktanella vestfoldensis
SKA53]
Length = 261
Score = 111 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 71/238 (29%), Positives = 118/238 (49%), Gaps = 5/238 (2%)
Query: 33 CFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV 92
LV S + ++++E ++ N A F + R + ++
Sbjct: 1 MLLVACSGAGSNV-----AMEDLSAQQIFELGERQIEAGNADDAAFTFGEIERLYHYSEF 55
Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
A+++L+M AF + G Y + + + ++ YP ++ Y YL+ +SY I D+ DQ
Sbjct: 56 AQRALIMQAFAYHRDGDYPNSRAAAQRFVDFYPAEQDAPYAAYLLALSYYDQISDIGRDQ 115
Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
T LQ + R++E Y +S Y + + +QLAAKE+E+GRYYLKR Y AA R
Sbjct: 116 GLTFEALQALRRVIETYPDSEYAAASVAKFDLAFDQLAAKEMEVGRYYLKRANYAAAANR 175
Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
F+ V+ ++ H EA+ RLVEAY++L L DEA+ +++ Y W L+
Sbjct: 176 FRTVVEDFQTTTHTPEALHRLVEAYLSLGLTDEAQTAGAILGYNYQSSDWYAASFALL 233
>gi|259418921|ref|ZP_05742838.1| tetratricopeptide TPR_2 repeat protein [Silicibacter sp. TrichCH4B]
gi|259345143|gb|EEW56997.1| tetratricopeptide TPR_2 repeat protein [Silicibacter sp. TrichCH4B]
Length = 283
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 76/245 (31%), Positives = 120/245 (48%)
Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85
I + L +V ++YE+ L A YF++ R
Sbjct: 11 IGVVALMATLAACGGADGDAQRSGQDLEVFTPAQIYERGEFELARNREQDAAYYFSEVER 70
Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
+P++ A++SL+M AF + A Y+ + S + YI YP ++ Y YL+ +SY I
Sbjct: 71 LYPYSEWAKQSLIMQAFTYHQAEDYENSRSAAQRYIDFYPTDEDAAYAQYLLALSYYDQI 130
Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
+V DQ T LQ + ++E Y +S Y A + + LA KE+EIGRYYLKR
Sbjct: 131 DEVGRDQGLTFQALQALRTVIEVYPDSEYASSAILKFDLAFDHLAGKEMEIGRYYLKRQH 190
Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
Y AAI RF++V+ ++ H EA+ RL+EAY++L L DEA+ +++ + W
Sbjct: 191 YTAAINRFRVVVEDFQTTSHTAEALYRLIEAYLSLGLTDEAQSAGAILGHNFQSTDWYED 250
Query: 266 VETLV 270
L+
Sbjct: 251 GYKLL 255
>gi|157964248|ref|YP_001499072.1| DNA uptake lipoprotein [Rickettsia massiliae MTU5]
gi|157844024|gb|ABV84525.1| DNA uptake lipoprotein [Rickettsia massiliae MTU5]
Length = 251
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 69/242 (28%), Positives = 124/242 (51%), Gaps = 6/242 (2%)
Query: 30 IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89
+ L G + + D + +Y + + L+++ + KA E F + P
Sbjct: 12 VIGLVLGGCTNKKNSDDIVV------PMPTLYNEGITLLEKKKYKKAAEEFGRVFYQHPG 65
Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
+ ++ LM A+ + A +Y++A + + +I +P + ++ Y YYL +SY +I DV
Sbjct: 66 NEMTPQAELMQAYSLFLAAQYEEAVDVLDMFINLHPANVDIAYAYYLKALSYYMLISDVN 125
Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
+DQ T L ++ ++ N+ Y + + + + LA KE+ +GR+YLK+ +AA
Sbjct: 126 HDQSRTFLAKDSFEDVIAKFPNTKYAIDSSLKIDLVNDHLAGKEMMVGRFYLKKKNPMAA 185
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
I RF+ V+ NY H+ EA+ RL E+Y+ L L DEA++ S++ YP W Y L
Sbjct: 186 INRFEEVIDNYQTTSHSVEALYRLAESYMMLGLPDEAKKYASVLGYNYPDSQWYSYAYRL 245
Query: 270 VK 271
V+
Sbjct: 246 VQ 247
>gi|77462668|ref|YP_352172.1| putative ComL lipoprotein [Rhodobacter sphaeroides 2.4.1]
gi|77387086|gb|ABA78271.1| Putative ComL lipoprotein [Rhodobacter sphaeroides 2.4.1]
Length = 278
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 73/247 (29%), Positives = 129/247 (52%), Gaps = 5/247 (2%)
Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQ-NFSKAYEYFNQC 83
+ ++ V + G S ++ + ++Y++ L+ + +A YF++
Sbjct: 8 LLGTALCVALMAGCGGGSQKE----PPLENFTAEQIYQRGEYELEARTKPDRAIRYFSEV 63
Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
R +P+ A+++L+M A+ + A Y++A + ++ YP ++ Y YL+ +SY
Sbjct: 64 ERLYPYTEWAKRALIMQAYSYHKAKDYEEARGAAQRFLDFYPGDEDAAYAQYLLALSYYD 123
Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
I +V DQ T LQ + ++E Y S Y + A + + LAAKE+EIGRYYLKR
Sbjct: 124 QIDEVGRDQGLTFQALQALRVVIEDYPESEYAQSAILKFDLAFDHLAAKEMEIGRYYLKR 183
Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
G Y AAI RF+ V+ ++ H EA+ RLVE+Y+AL L++EA+ +++ Y +
Sbjct: 184 GHYTAAINRFRTVVEDFQTTTHTAEALHRLVESYLALGLVNEAQTAGAILGHNYRSSPFY 243
Query: 264 RYVETLV 270
L+
Sbjct: 244 EDSYKLL 250
>gi|145589103|ref|YP_001155700.1| putative transmembrane protein [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|145047509|gb|ABP34136.1| putative transmembrane protein [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
Length = 295
Score = 110 bits (273), Expect = 3e-22, Method: Composition-based stats.
Identities = 63/260 (24%), Positives = 115/260 (44%), Gaps = 14/260 (5%)
Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
FAL + A+ L G + TD+ + ++Y +A + + +F+K +YF
Sbjct: 30 FALLLAIIFALILLGGCAGSEGKK----DDTDIWPEAKLYSEATDKMNDADFAKCGKYFE 85
Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
+ FPF ++++ + SA+ + A + QA + +I + S +DY YYL G+
Sbjct: 86 KLEARFPFGPYSQQAQINSAYCYWKAQEQAQALIAIDRFIKLHQGSPTLDYAYYLKGLIT 145
Query: 142 AQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
D +A K + +V+R+ +S Y + + N LA
Sbjct: 146 FNDDLGWLGNFTGQDLSERDPKAAKEAFESFKTVVDRFPDSKYAPDSLDRMRYIVNSLAE 205
Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
+V + R+Y +RG Y+A+ R QLV+ +Y A EEA+ LV++Y L L + +
Sbjct: 206 ADVNVARFYYQRGAYLASANRAQLVIRDYDRAPAVEEALYILVKSYEKLGLTQLSNDSAR 265
Query: 252 LIQERYPQGYWARYVETLVK 271
+ +P + + K
Sbjct: 266 VFALNFPDSTMLETGQRVKK 285
>gi|254488543|ref|ZP_05101748.1| competence lipoprotein ComL [Roseobacter sp. GAI101]
gi|214045412|gb|EEB86050.1| competence lipoprotein ComL [Roseobacter sp. GAI101]
Length = 289
Score = 110 bits (273), Expect = 3e-22, Method: Composition-based stats.
Identities = 71/254 (27%), Positives = 127/254 (50%), Gaps = 6/254 (2%)
Query: 23 ALTIFFSIAVCFLVGWERQ------SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76
+ + V L Q S + + +++E+ L + ++A
Sbjct: 8 KRLVGAVLVVAALGACGSQDTGRFTKSFFNPQEVPLETYSAEQIFERGEFELNRKRPAEA 67
Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
EYF++ R +P++ A+++L+M AF + Y + S + +I +P+ + Y YL
Sbjct: 68 AEYFSEIERLYPYSEWAKRALIMQAFAFHQDQDYPNSRSAAQRFIDFFPDDDDAAYASYL 127
Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196
+ +SY I +V DQ T LQ + +++E Y +S Y + A + + LA KE+E+
Sbjct: 128 LALSYYDQIDEVGRDQGLTFQALQSLRQVIENYPDSEYARAAVLKFDLAFDHLAGKEMEV 187
Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
GRYYL+R Y A+I RF++V+ ++ H EA+ RLVEAY++L L +EA+ +++
Sbjct: 188 GRYYLRRKHYTASINRFRVVVEDFQTTSHTAEALHRLVEAYLSLGLTNEAQTAGAILGYN 247
Query: 257 YPQGYWARYVETLV 270
Y W L+
Sbjct: 248 YQSTEWYAASYALL 261
>gi|126726631|ref|ZP_01742471.1| Putative ComL lipoprotein [Rhodobacterales bacterium HTCC2150]
gi|126703960|gb|EBA03053.1| Putative ComL lipoprotein [Rhodobacterales bacterium HTCC2150]
Length = 278
Score = 109 bits (271), Expect = 4e-22, Method: Composition-based stats.
Identities = 75/251 (29%), Positives = 129/251 (51%), Gaps = 4/251 (1%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
K + + + + R +++ D R ++ A L+E+ KA +
Sbjct: 4 KKTLHIVGGVLMLASVTACSRLGNKEPVY----DNLPARSIFTLAEQKLEEKEPEKAAKI 59
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
F + R +P++ +A+++L+M AF + Y+ + + +I YP ++ Y YL+ +
Sbjct: 60 FGEIERLYPYSDLAKRALIMQAFSYHKDKDYENSRIAAQRFIDFYPADEDAAYAEYLLAL 119
Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
SY I +V DQ T LQ + ++ERY ++ Y K A + + LAAKE+EIGRY
Sbjct: 120 SYYDQIDEVGRDQGLTFQALQGLRTVIERYPDTEYAKSAILKFDLAFDHLAAKEMEIGRY 179
Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
YLKR Y +AI RF++V+ ++ H EA+ RL+EAY+AL L DEA+ +++ +
Sbjct: 180 YLKRDHYTSAINRFRVVVEDFQTTAHTAEALYRLIEAYLALGLADEAQTAGAILGHNFQS 239
Query: 260 GYWARYVETLV 270
W L+
Sbjct: 240 TEWYDDGFRLL 250
>gi|126740309|ref|ZP_01755997.1| competence lipoprotein ComL, putative [Roseobacter sp. SK209-2-6]
gi|126718445|gb|EBA15159.1| competence lipoprotein ComL, putative [Roseobacter sp. SK209-2-6]
Length = 283
Score = 109 bits (270), Expect = 5e-22, Method: Composition-based stats.
Identities = 73/242 (30%), Positives = 120/242 (49%)
Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
+I V L G + +++E+ L A YF++ R +P
Sbjct: 14 AILVAALSGCGGDGGAGKERSIPLETYTPEQIFERGEFELARSRTKDAAYYFSEIERLYP 73
Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
++ A+++L+M AF + + Y+ + + +I YP ++ Y YL+ +SY I +V
Sbjct: 74 YSEYAKQALIMQAFAYHQSKDYENSRGAAQRFIDFYPTDEDAAYAQYLLALSYYDQIDEV 133
Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
DQ T LQ + ++E Y +S Y A + + LA KE+EIGRYYL+RG + +
Sbjct: 134 GRDQGLTFQALQSLLTVIEVYPDSEYANAAILKFDLAFDHLAGKEMEIGRYYLRRGHFTS 193
Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
AI RF++V+ Y H EA+ RLVEAY++L L DEA+ +++ Y W
Sbjct: 194 AINRFRVVVEEYQTTTHTPEALHRLVEAYLSLGLTDEAQTAGAILGHNYQSSEWYEDSYR 253
Query: 269 LV 270
L+
Sbjct: 254 LL 255
>gi|99080532|ref|YP_612686.1| competence lipoprotein ComL, putative [Ruegeria sp. TM1040]
gi|99036812|gb|ABF63424.1| competence lipoprotein ComL putative [Ruegeria sp. TM1040]
Length = 283
Score = 109 bits (270), Expect = 5e-22, Method: Composition-based stats.
Identities = 74/245 (30%), Positives = 117/245 (47%)
Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85
I + L + ++YE+ L A +F++ R
Sbjct: 11 IGVVALMATLAACGGADGDAQRSSLDLEGFSPAQIYERGEFELARSREKDAAYFFSEVER 70
Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
+P++ A++SL+M AF + A Y+ + S + YI YP + Y YL+ +SY I
Sbjct: 71 LYPYSEWAKQSLIMQAFTYHQAEDYENSRSAAQRYIDFYPTDADAAYAQYLLALSYYDQI 130
Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
+V DQ T LQ + ++E Y S Y A + + LA KE+EIGRYYLKR
Sbjct: 131 DEVGRDQGLTFQALQALRTVIEVYPESEYASSAILKFDLAFDHLAGKEMEIGRYYLKRQH 190
Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
Y AAI RF++V+ ++ H EA+ RL+EAY++L L DEA+ +++ + W
Sbjct: 191 YSAAINRFRVVVEDFQTTSHTAEALYRLIEAYLSLGLTDEAQSAGAILGHNFQSTDWYED 250
Query: 266 VETLV 270
L+
Sbjct: 251 GYRLL 255
>gi|299771332|ref|YP_003733358.1| DNA uptake lipoprotein [Acinetobacter sp. DR1]
gi|298701420|gb|ADI91985.1| DNA uptake lipoprotein [Acinetobacter sp. DR1]
Length = 387
Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats.
Identities = 54/250 (21%), Positives = 100/250 (40%), Gaps = 11/250 (4%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
YK + VG S+ +DS ++ +EKA L + A +
Sbjct: 6 YKITMLALSLGVASAFVGCSSNPSKKEVVDSGPQ-SSEQAYFEKAQKSLDRGQYLDATKS 64
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
+P A+++ L + ++ Y+ A +L E +I P+ NVDY YY+ +
Sbjct: 65 LEAIDTYYPTGQYAQQAQLELLYSKFKQKDYEGAIALAERFIRLNPQHPNVDYAYYVRAV 124
Query: 140 SYAQMIRDVPYDQRATKL----------MLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
S + D + + Q ++ R+ +S Y A + +L
Sbjct: 125 SNMEQNYDSLMRYTSLQQSHRDVSYLKVAYQNFVDLIRRFPSSQYSVDAAQRMKFIGQEL 184
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
A E+ R+ +KR ++AA R Q V+ +Y EA+A L +Y L +++
Sbjct: 185 AENEMTAARFNVKRKAWIAAAERSQWVIEHYPQTPQVPEALATLAYSYNQLGDKATSQQY 244
Query: 250 VSLIQERYPQ 259
+ +++ YP
Sbjct: 245 IEVLKLNYPN 254
>gi|325121170|gb|ADY80693.1| putative competence protein (ComL) [Acinetobacter calcoaceticus
PHEA-2]
Length = 387
Score = 108 bits (268), Expect = 9e-22, Method: Composition-based stats.
Identities = 52/250 (20%), Positives = 100/250 (40%), Gaps = 11/250 (4%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
YK + VG S+ +D+ ++ +EKA L + A +
Sbjct: 6 YKITVLALSLGVASAFVGCSSNPSKKEVVDTGPQ-SSEQAYFEKAQKSLDRGQYLDATKS 64
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
+P A+++ L + ++ Y+ A +L E +I P+ NVDY YY+ +
Sbjct: 65 LEAIDTYYPTGQYAQQAQLELLYSKFKQKDYEGAIALAERFIRLNPQHPNVDYAYYVRAV 124
Query: 140 SYAQMIRDVPYDQRATKL----------MLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
+ + D + + Q ++ R+ +S Y A + +L
Sbjct: 125 ANMEQNYDSLMRYTSLQQSHRDVSYLKVAYQNFVDLIRRFPSSQYSVDAAQRMKFIGQEL 184
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
A E+ R+ +KR ++AA R Q V+ +Y EA+A L +Y L +++
Sbjct: 185 AENEMTAARFNVKRKAWIAAAERSQWVIEHYPQTPQIPEALATLAYSYDKLGDKATSQQY 244
Query: 250 VSLIQERYPQ 259
+ +++ YP
Sbjct: 245 IEVLKLNYPS 254
>gi|146276754|ref|YP_001166913.1| TPR repeat-containing protein [Rhodobacter sphaeroides ATCC 17025]
gi|145554995|gb|ABP69608.1| Tetratricopeptide TPR_2 repeat protein [Rhodobacter sphaeroides
ATCC 17025]
Length = 278
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 75/246 (30%), Positives = 128/246 (52%), Gaps = 5/246 (2%)
Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQ-NFSKAYEYFNQCS 84
+ ++ V L G S ++ + ++Y++ L+ Q +A YF++
Sbjct: 9 LGTALCVALLTGCGGGSQKE----PPLENFTAEQIYQRGEYELEAQTKPDRAIRYFSEVE 64
Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
R +P+ A+++L+M A+ + A Y++A + ++ YP ++ Y YL+ +SY
Sbjct: 65 RLYPYTEWAKRALIMQAYSYHKAKNYEEARGAAQRFLDFYPGDEDAAYAQYLLALSYYDQ 124
Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204
I +V DQ T LQ + ++E+Y +S Y + A + + LAAKE+EIGRYYLKRG
Sbjct: 125 IDEVGRDQGLTFQALQALRVVIEQYPDSEYAQSAILKFDLAFDHLAAKEMEIGRYYLKRG 184
Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
Y AAI RF+ V+ + H EA+ RLVE Y+AL L +EA+ +++ Y +
Sbjct: 185 HYSAAINRFRTVVEEFQTTTHTAEALHRLVEGYLALGLQNEAQTAGAILGHNYRSSPFYD 244
Query: 265 YVETLV 270
L+
Sbjct: 245 DSYRLL 250
>gi|262280060|ref|ZP_06057845.1| competence lipoprotein comL [Acinetobacter calcoaceticus RUH2202]
gi|262260411|gb|EEY79144.1| competence lipoprotein comL [Acinetobacter calcoaceticus RUH2202]
Length = 387
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 53/250 (21%), Positives = 100/250 (40%), Gaps = 11/250 (4%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
YK + VG S+ +DS ++ +EKA L + A +
Sbjct: 6 YKITMLALSLGLASAFVGCSSNPSKKEVVDSGPQ-SSEQAYFEKAQKSLDRGQYLDATKS 64
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
+P A+++ L + ++ Y+ A +L E +I P+ NVDY YY+ +
Sbjct: 65 LEAIDTYYPTGQYAQQAQLELLYSKFKQKDYEGAIALAERFIRLNPQHPNVDYAYYVRAV 124
Query: 140 SYAQMIRDVPYDQRATKL----------MLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
+ + D + + Q ++ R+ +S Y A + +L
Sbjct: 125 ANMEQNYDSLMRYTSLQQSHRDVSYLKVAYQNFVDLIRRFPSSQYSVDAAQRMKFIGQEL 184
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
A E+ R+ +KR ++AA R Q V+ +Y EA+A L +Y L +++
Sbjct: 185 AENEMTAARFNVKRKAWIAAAERSQWVIEHYPQTPQVPEALATLAYSYSQLGDKATSQQY 244
Query: 250 VSLIQERYPQ 259
+ +++ YP
Sbjct: 245 IEVLKLNYPN 254
>gi|163746142|ref|ZP_02153501.1| competence lipoprotein ComL, putative [Oceanibulbus indolifex
HEL-45]
gi|161380887|gb|EDQ05297.1| competence lipoprotein ComL, putative [Oceanibulbus indolifex
HEL-45]
Length = 288
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 73/253 (28%), Positives = 121/253 (47%), Gaps = 5/253 (1%)
Query: 23 ALTIFFSIAVCFLVGWERQSSRD-----VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
TI + + L R + + +++E+ L N +A
Sbjct: 8 KRTISAVLLIATLAACGGGDGRSDGSFFNPQEIPLETYSAEQIFERGEYELTNNNPGEAA 67
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
YF + R +P++ A+++L+M AF + Y + S + +I YP + Y YL+
Sbjct: 68 FYFAEIERLYPYSEWAKRALIMQAFAYHKDQDYPNSRSAAQRFIDFYPAEDDAAYAQYLL 127
Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
+SY I +V DQ T LQ + ++E Y +S Y + A + + LA KE+EIG
Sbjct: 128 ALSYYDQIDEVGRDQGLTFQALQSLRAVIEGYPDSEYARSAILKFDLAFDHLAGKEMEIG 187
Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
RYYL+R Y AAI RF++V+ ++ H EA+ RLVE+Y++L L EA+ +++ Y
Sbjct: 188 RYYLRRDHYTAAINRFRVVVEDFQTTTHTAEALHRLVESYLSLGLDKEAQTAGAILGHNY 247
Query: 258 PQGYWARYVETLV 270
W L+
Sbjct: 248 RGSEWYEDSYKLL 260
>gi|114327085|ref|YP_744242.1| ComL family lipoprotein [Granulibacter bethesdensis CGDNIH1]
gi|114315259|gb|ABI61319.1| lipoprotein, ComL family [Granulibacter bethesdensis CGDNIH1]
Length = 317
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 72/242 (29%), Positives = 118/242 (48%), Gaps = 7/242 (2%)
Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
G ++ E+Y V +++ ++ A + F+ + +P++ A
Sbjct: 54 SGCGSSKDDELAKLDPAK-MSVEELYNTGVDAMQDHRYTTAAQQFDAVQQYYPYSSWAAN 112
Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
+ LM + QY KY A + +I +P K++ Y YYL +S+ + I D+ DQ+ T
Sbjct: 113 AQLMQGYSQYLEHKYMDAIGSLDRFIQLHPTHKDIAYAYYLRALSFYEQIADIQRDQKGT 172
Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
+ + + +V R+ +S Y + AR + + R+ LA KE+EIGRYY + Y AAI RFQ
Sbjct: 173 EDAMTALQEVVSRFPDSGYARDARLKIDLCRDHLAGKEMEIGRYYEREHLYAAAINRFQT 232
Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR------YVETL 269
V+ Y H EA+ RL E Y+ L L +AR +++ YP W + E L
Sbjct: 233 VVKEYQTTNHVPEALHRLTELYLLLGLRSDARRTAAVLGHNYPGSSWYQSSWDDLAAENL 292
Query: 270 VK 271
VK
Sbjct: 293 VK 294
>gi|121602062|ref|YP_989220.1| putative lipoprotein [Bartonella bacilliformis KC583]
gi|120614239|gb|ABM44840.1| putative lipoprotein [Bartonella bacilliformis KC583]
Length = 279
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 84/253 (33%), Positives = 125/253 (49%), Gaps = 1/253 (0%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRD-VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ L + L G + V + VY +A+ +A +
Sbjct: 1 MRKILIGVCGGGIFLLAGCWFKDKNALDPAVHVLKIDSPDVVYAQALSHFHSGKLDEALK 60
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
F+ + RKSL+MSA Y KY A S + YIT YP + + Y YYLVG
Sbjct: 61 KFSIIEEQHAYTEWGRKSLIMSASTNYRLAKYDDAISAAQRYITLYPTAGDAAYAYYLVG 120
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
+S Q I V DQ+ TK + M ++ERY S YV A+ + GR QLA +E++IGR
Sbjct: 121 LSSFQQISHVTRDQQDTKRAIAAMQLLIERYPESDYVNDAKAKILFGREQLAGQEMQIGR 180
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
YY + +Y+AA RF+ V+ YSD + EEA+ RL E AL L++EA+ +++ YP
Sbjct: 181 YYERGQQYLAASRRFRTVIEEYSDTKQIEEALFRLTEVSFALGLIEEAQTAAVMLERYYP 240
Query: 259 QGYWARYVETLVK 271
+ W ++ L+K
Sbjct: 241 ESSWYKFASDLLK 253
>gi|293609057|ref|ZP_06691360.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292829630|gb|EFF87992.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 387
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 50/250 (20%), Positives = 99/250 (39%), Gaps = 11/250 (4%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
YK + VG S+ +++ ++ +EKA L + A +
Sbjct: 6 YKITMLALSLGVASAFVGCSSNPSKKEVVNTGPQ-SSEQAYFEKAQKSLDRGQYLDATKS 64
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
+P A+++ L + ++ Y+ +L E +I P+ NVDY YY+ +
Sbjct: 65 LEAIDTYYPTGQYAQQAQLELLYSKFKQKDYEGTIALAERFIRLNPQHPNVDYAYYVRAV 124
Query: 140 SYAQMIRDVPYDQRATKL----------MLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
+ + D + + Q ++ R+ +S Y A + +L
Sbjct: 125 ANMEQNYDSLMRYTSLQQSHRDVSYLKVAYQNFVDLIRRFPSSQYSVDAAQRMKFIGQEL 184
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
A E+ R+ +KR ++AA R Q V+ +Y EA+A L +Y L +++
Sbjct: 185 AENEMTAARFNVKRKAWIAAAERSQWVIEHYPQTPQIPEALATLAYSYDKLGDKATSQQY 244
Query: 250 VSLIQERYPQ 259
+ +++ YP
Sbjct: 245 IEVLKLNYPS 254
>gi|239501206|ref|ZP_04660516.1| DNA uptake lipoprotein [Acinetobacter baumannii AB900]
Length = 385
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 55/250 (22%), Positives = 102/250 (40%), Gaps = 11/250 (4%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
YK + VG S+ +D+ ++ ++KA L + A +
Sbjct: 6 YKITMLALSLGVASAFVGCSSNPSKKEVVDTGPQ-SSEQAYFDKAQKALDRGQYLDATKS 64
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
+P A+++ L + ++ Y+ A +L E +I P+ NVDY YY+ G+
Sbjct: 65 LEAIDTYYPTGQYAQQAQLELLYSKFKQKDYEGAIALAERFIRLNPQHPNVDYAYYVRGV 124
Query: 140 SYAQMIR----------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
S +M D K+ Q ++ R+ +S Y A + +L
Sbjct: 125 SNMEMNYDSLLRYTSLQQSHRDVSYLKVAYQNFVDLIRRFPSSQYSVDAAQRMKFIGQEL 184
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
A E+ R+ +KR ++AA R Q V+ +Y EA+A L +Y L +++
Sbjct: 185 AESEMNAARFNVKRKAWIAAAERSQWVIEHYPQTPQVPEALATLAYSYDQLGDKATSQQY 244
Query: 250 VSLIQERYPQ 259
+ +++ YP
Sbjct: 245 IEVLKLNYPS 254
>gi|262373261|ref|ZP_06066540.1| competence lipoprotein comL [Acinetobacter junii SH205]
gi|262313286|gb|EEY94371.1| competence lipoprotein comL [Acinetobacter junii SH205]
Length = 365
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 53/250 (21%), Positives = 100/250 (40%), Gaps = 11/250 (4%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
YK + VG S+ +D ++ +EKA L ++ A +
Sbjct: 6 YKITMLALSLGVASAFVGCSSNPSKKEVVDKGPQ-SSEQVYFEKAQKSLDRNQYTDAVKS 64
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
+P +++ L + ++ Y+ +L E +I P+ NVDY YY+ G+
Sbjct: 65 LEALDTYYPTGRYTQQAQLELLYAKFKQKDYEGTIALAERFIRLNPQHPNVDYAYYVRGV 124
Query: 140 SYAQMIR----------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
+ +M D K+ Q ++ R+ +S Y A + +L
Sbjct: 125 ANMEMNYDSLIRYTSLQQSHRDVSYVKVAYQNFVDLIRRFPSSKYSVDAAQRMKFIGQEL 184
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
A E+ R+ ++R ++AA R Q V+ +Y EA+A L +Y L A++
Sbjct: 185 AESEMNAARFNIQRKAWLAAAERAQWVIEHYPQTPQTPEALATLAYSYQKLGDNSTAQQY 244
Query: 250 VSLIQERYPQ 259
+ +++ YP
Sbjct: 245 IEILKLNYPN 254
>gi|149201858|ref|ZP_01878832.1| Putative ComL lipoprotein [Roseovarius sp. TM1035]
gi|149144906|gb|EDM32935.1| Putative ComL lipoprotein [Roseovarius sp. TM1035]
Length = 265
Score = 107 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 67/238 (28%), Positives = 128/238 (53%), Gaps = 1/238 (0%)
Query: 33 CFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV 92
+ G + S + + + ++++E+ L +++ A + F + R +P++ +
Sbjct: 1 MVIAGCGERESVERGNVN-YENYTAQQIFERGEYDLAQRDPDLAAKSFAEVERLYPYSDL 59
Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
A+++++M AF + Y+++ + + +I YP ++ Y YL+ +SY I +V DQ
Sbjct: 60 AKRAVIMQAFAHHQDKAYEESRAAAQRFIDFYPTDEDAAYAQYLLALSYYDQIDEVGRDQ 119
Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
T LQ + ++ERY +S Y A + + LA+KE+EIGRYYLKR + AA R
Sbjct: 120 GLTFQALQSLREVIERYPDSEYANSAILKFDLAFDHLASKEMEIGRYYLKRDNFAAAANR 179
Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
F++V+ ++ H EA+ RLVE+Y++L L++EAR +++ + W L+
Sbjct: 180 FRVVVEDFQTTTHTAEALHRLVESYLSLGLVNEARTAGAILGHNFQGTDWYEDSYKLL 237
>gi|300312308|ref|YP_003776400.1| transmembrane protein [Herbaspirillum seropedicae SmR1]
gi|300075093|gb|ADJ64492.1| transmembrane protein [Herbaspirillum seropedicae SmR1]
Length = 266
Score = 107 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 59/255 (23%), Positives = 100/255 (39%), Gaps = 14/255 (5%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
++K L F L + T ++Y +A L + KA +
Sbjct: 1 MHKILLKFFIIGFALSLTACGLLPEQK----DETTGWSAAKLYSEAKDELNAGGYDKAIK 56
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV- 137
YF + +PF A+++ + A+ Y + Q + + +I +P NVDY+YYL
Sbjct: 57 YFEKLESRYPFGTYAQQAQMDIAYAYYRQNEQAQGLAAVDRFIKLHPNHPNVDYMYYLRG 116
Query: 138 ---------GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
+ D +A + + ER+ +S Y A + N
Sbjct: 117 LINFNDRTSIFDTFTDQDNTERDPKAMRDAFDSFKLLAERFPDSKYTPDAIARMKYLVNA 176
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
++ +V + YY +RG YV+A R Q + Y D+ EEA+ L+ +Y AL +
Sbjct: 177 MSQYDVHVASYYFRRGAYVSAANRAQSAIKQYPDSPANEEALFILMRSYEALGQTKLKED 236
Query: 249 VVSLIQERYPQGYWA 263
+IQ YP W
Sbjct: 237 TERIIQATYPNSPWY 251
>gi|85703757|ref|ZP_01034861.1| Putative ComL lipoprotein [Roseovarius sp. 217]
gi|85672685|gb|EAQ27542.1| Putative ComL lipoprotein [Roseovarius sp. 217]
Length = 265
Score = 107 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 68/238 (28%), Positives = 129/238 (54%), Gaps = 1/238 (0%)
Query: 33 CFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV 92
+ G + S + + + ++++E+ L +++ A F + R +P++ +
Sbjct: 1 MAIAGCGNKESVERGTVN-YENYTAQQIFERGEYDLAQRDPELAATSFAEVERLYPYSDL 59
Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
A+++++M AF + A +Y+++ + + +I YP ++ Y YL+ +SY I +V DQ
Sbjct: 60 AKRAVIMQAFAHHQAKEYEESRAAAQRFIDFYPTDEDAAYAQYLLALSYYDQIDEVGRDQ 119
Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
T LQ + ++ERY +S Y A + + LA+KE+EIGRYYLKR + AA R
Sbjct: 120 GLTFQALQSLREVIERYPDSEYANAAILKFDLAFDHLASKEMEIGRYYLKRDNFAAAANR 179
Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
F++V+ ++ H EA+ RLVE+Y++L L++EAR +++ + W L+
Sbjct: 180 FRVVVEDFQTTTHTAEALHRLVESYLSLGLVNEARTAGAILGHNFQGTDWYEDSYKLL 237
>gi|330813742|ref|YP_004357981.1| putative competence lipoprotein ComL [Candidatus Pelagibacter sp.
IMCC9063]
gi|327486837|gb|AEA81242.1| putative competence lipoprotein ComL [Candidatus Pelagibacter sp.
IMCC9063]
Length = 279
Score = 107 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 66/255 (25%), Positives = 117/255 (45%), Gaps = 3/255 (1%)
Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
F ++ F G +Y +A+L K + A
Sbjct: 1 MFQNFFYKYLLIFSLIFAYGCSS--KNKTIFVEPKTTIPLERLYTEALLNYKNNKYQDAV 58
Query: 78 EYFNQCSRDFPF-AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
E F + +++ F A KSLLM ++ Y +Y ++ + +++ +Y +KN+DYV YL
Sbjct: 59 ELFEEVEKNYSFNTEWASKSLLMRGYIYYEVSRYVESLEILKKFKMRYAGNKNMDYVEYL 118
Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196
+ M + I + Q T L + +I+ Y NS Y + ++F + + ++QLA KE+ I
Sbjct: 119 IAMCLFEQINIIALSQENTLLTERQFKKIILNYPNSRYAEDSKFKLDLIQDQLAGKEMYI 178
Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
RYY +R ++ A+ R VL + + EEA+ RLVE + L + AR+ S++
Sbjct: 179 ARYYTEREKWGPALVRLNKVLKYHETTVYIEEALHRLVEIHYKLGNIPAARKYASILGYN 238
Query: 257 YPQGYWARYVETLVK 271
Y W + +V+
Sbjct: 239 YNDSDWYKKSYNIVE 253
>gi|297182617|gb|ADI18776.1| DNA uptake lipoprotein [uncultured gamma proteobacterium
HF4000_36I10]
Length = 310
Score = 107 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 53/243 (21%), Positives = 108/243 (44%), Gaps = 17/243 (6%)
Query: 27 FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86
+ V L ++ ++++Y +A L+ N+S A +
Sbjct: 8 LMILLVGVLAACASDPEKE-------AESSEKQIYNQAQEHLENGNYSLAVKNLQLLESR 60
Query: 87 FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146
FPF A ++ L + Y + + + A + + +I +P+ +VDY YY+ G++ +
Sbjct: 61 FPFGPYAEQAQLEIIYAHYRSLEPEAAIAAADRFIRLHPQHPSVDYAYYMRGLANYTEGQ 120
Query: 147 DVPYDQRATK----------LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196
+ T + ++++R+ +S Y AR + RN+LA E+ +
Sbjct: 121 GLLERFFPTDMSQRDPGAAVQAFEDFRQLLQRFPDSQYAPDARARMIHLRNRLARYEINV 180
Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
YY KR Y+AA R + V+ N +A+A +V+AY+ L + D A +++++
Sbjct: 181 ANYYFKRKAYLAAANRGRYVVENMPQTSAVPDALAVMVQAYLLLGMDDLADRSLTVLRSN 240
Query: 257 YPQ 259
+P+
Sbjct: 241 FPK 243
>gi|184157113|ref|YP_001845452.1| DNA uptake lipoprotein [Acinetobacter baumannii ACICU]
gi|183208707|gb|ACC56105.1| DNA uptake lipoprotein [Acinetobacter baumannii ACICU]
Length = 385
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 55/250 (22%), Positives = 102/250 (40%), Gaps = 11/250 (4%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
YK + VG S+ +D+ ++ ++KA L + A +
Sbjct: 6 YKITMLALSLGVASAFVGCSSNPSKKEVVDTGPQ-SSEQAYFDKAQKALDRGQYLDATKS 64
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
+P A+++ L + ++ Y+ A +L E +I P+ NVDY YY+ G+
Sbjct: 65 LEAIDTYYPTGQYAQQAQLELLYSKFKQKDYEGAIALAERFIRLNPQHPNVDYAYYVRGV 124
Query: 140 SYAQMIR----------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
S +M D K+ Q ++ R+ +S Y A + +L
Sbjct: 125 SNMEMNYDSLLRYTSLQQSHRDVSYLKVAYQNFVDLIRRFPSSQYSVDAAQRMKFIGQEL 184
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
A E+ R+ +KR ++AA R Q V+ +Y EA+A L +Y L +++
Sbjct: 185 AESEMNAARFNVKRKAWIAAAERSQWVIEHYPQTPQVPEALATLAYSYDQLGDKATSQQY 244
Query: 250 VSLIQERYPQ 259
+ +++ YP
Sbjct: 245 IEVLKLNYPS 254
>gi|169796975|ref|YP_001714768.1| putative competence protein (ComL) [Acinetobacter baumannii AYE]
gi|213156620|ref|YP_002318281.1| putative competence protein [Acinetobacter baumannii AB0057]
gi|215484436|ref|YP_002326669.1| Competence lipoprotein comL precursor [Acinetobacter baumannii
AB307-0294]
gi|260555734|ref|ZP_05827954.1| competence lipoprotein comL [Acinetobacter baumannii ATCC 19606]
gi|301346836|ref|ZP_07227577.1| DNA uptake lipoprotein [Acinetobacter baumannii AB056]
gi|301511994|ref|ZP_07237231.1| DNA uptake lipoprotein [Acinetobacter baumannii AB058]
gi|301594460|ref|ZP_07239468.1| DNA uptake lipoprotein [Acinetobacter baumannii AB059]
gi|169149902|emb|CAM87795.1| putative competence protein (ComL) [Acinetobacter baumannii AYE]
gi|213055780|gb|ACJ40682.1| putative competence protein [Acinetobacter baumannii AB0057]
gi|213986423|gb|ACJ56722.1| Competence lipoprotein comL precursor [Acinetobacter baumannii
AB307-0294]
gi|260410645|gb|EEX03943.1| competence lipoprotein comL [Acinetobacter baumannii ATCC 19606]
Length = 385
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 55/250 (22%), Positives = 102/250 (40%), Gaps = 11/250 (4%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
YK + VG S+ +D+ ++ ++KA L + A +
Sbjct: 6 YKITMLALSLGVASAFVGCSSNPSKKEVVDTGPQ-SSEQAYFDKAQKALDRGQYLDATKS 64
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
+P A+++ L + ++ Y+ A +L E +I P+ NVDY YY+ G+
Sbjct: 65 LEAIDTYYPTGQYAQQAQLELLYSKFKQKDYEGAIALAERFIRLNPQHPNVDYAYYVRGV 124
Query: 140 SYAQMIR----------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
S +M D K+ Q ++ R+ +S Y A + +L
Sbjct: 125 SNMEMNYDSLLRYTSLQQSHRDVSYLKVAYQNFVDLIRRFPSSQYSVDAAQRMKFIGQEL 184
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
A E+ R+ +KR ++AA R Q V+ +Y EA+A L +Y L +++
Sbjct: 185 AESEMNAARFNVKRKAWIAAAERSQWVIEHYPQTPQVPEALATLAYSYDQLGDKATSQQY 244
Query: 250 VSLIQERYPQ 259
+ +++ YP
Sbjct: 245 IEVLKLNYPS 254
>gi|193076603|gb|ABO11274.2| putative competence protein (ComL) [Acinetobacter baumannii ATCC
17978]
Length = 385
Score = 106 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 55/250 (22%), Positives = 102/250 (40%), Gaps = 11/250 (4%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
YK + VG S+ +D+ ++ ++KA L + A +
Sbjct: 6 YKITMLALSLGVASAFVGCSSNPSKKEVVDTGPQ-SSEQAYFDKAQKALDRGQYLDATKS 64
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
+P A+++ L + ++ Y+ A +L E +I P+ NVDY YY+ G+
Sbjct: 65 LEAIDTYYPTGQYAQQAQLELLYSKFKQKDYEGAIALAERFIRLNPQHPNVDYAYYVRGV 124
Query: 140 SYAQMIR----------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
S +M D K+ Q ++ R+ +S Y A + +L
Sbjct: 125 SNMEMNYDSLLRYTSLQQSHRDVSYLKVAYQNFVDLIRRFPSSQYSVDAAQRMKFIGQEL 184
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
A E+ R+ +KR ++AA R Q V+ +Y EA+A L +Y L +++
Sbjct: 185 AESEMNAARFNVKRKAWIAAAERSQWVIEHYPQTPQVPEALATLAYSYDQLGDKATSQQY 244
Query: 250 VSLIQERYPQ 259
+ +++ YP
Sbjct: 245 IEVLKLNYPS 254
>gi|56696099|ref|YP_166453.1| competence lipoprotein ComL, putative [Ruegeria pomeroyi DSS-3]
gi|56677836|gb|AAV94502.1| competence lipoprotein ComL, putative [Ruegeria pomeroyi DSS-3]
Length = 284
Score = 106 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 71/218 (32%), Positives = 117/218 (53%)
Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
D +++E+ L + A YF++ R +P++ A+++L+M AF +S Y +
Sbjct: 39 DGYTPEQIFERGEYELSAKRTEDAAYYFSEVERLYPYSNWAKRALIMQAFAYHSGKDYPE 98
Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
+ + + YI YP ++ Y YL+ +SY I +V DQ T LQ + ++E Y +S
Sbjct: 99 SRAAAQRYIDFYPADEDAAYAQYLLALSYYDQIDEVGRDQGLTFQALQALRTVIEVYPDS 158
Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232
Y A + + LAAKE+EIGRYYL+R + AAI RF++V+ ++ H EA+ R
Sbjct: 159 EYATSAILKFDLAFDHLAAKEMEIGRYYLRRQHFSAAINRFRVVVEDFQTTTHTAEALHR 218
Query: 233 LVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
LVEAY++L L EA+ +++ Y W L+
Sbjct: 219 LVEAYLSLGLEAEAQTAGAILGHNYQSSEWYEASYKLL 256
>gi|169634098|ref|YP_001707834.1| putative competence protein (ComL) [Acinetobacter baumannii SDF]
gi|169152890|emb|CAP01928.1| putative competence protein (ComL) [Acinetobacter baumannii]
Length = 385
Score = 106 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 55/250 (22%), Positives = 102/250 (40%), Gaps = 11/250 (4%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
YK + VG S+ +D+ ++ ++KA L + A +
Sbjct: 6 YKITMLALSLGVASAFVGCSSNPSKKEVVDTGPQ-SSEQAYFDKAQKALDRGQYLDATKS 64
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
+P A+++ L + ++ Y+ A +L E +I P+ NVDY YY+ G+
Sbjct: 65 LEAIDTYYPTGQYAQQAQLELLYSKFKQKDYEGAIALAERFIRLNPQHPNVDYAYYVRGV 124
Query: 140 SYAQMIR----------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
S +M D K+ Q ++ R+ +S Y A + +L
Sbjct: 125 SNMEMNYDSLLRYTSLQQSHRDVSYLKVAYQNFVDLIRRFPSSQYSVDAAQRMKFIGQEL 184
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
A E+ R+ +KR ++AA R Q V+ +Y EA+A L +Y L +++
Sbjct: 185 AESEMNAARFNVKRKAWIAAAERSQWVIEHYPQTPQVPEALATLAYSYDQLGDKATSQQY 244
Query: 250 VSLIQERYPQ 259
+ +++ YP
Sbjct: 245 IEVLKLNYPS 254
>gi|109897659|ref|YP_660914.1| putative lipoprotein [Pseudoalteromonas atlantica T6c]
gi|109699940|gb|ABG39860.1| putative lipoprotein [Pseudoalteromonas atlantica T6c]
Length = 255
Score = 106 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 59/256 (23%), Positives = 117/256 (45%), Gaps = 14/256 (5%)
Query: 18 QLYKFAL-TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76
+ K +L IF + A+ L G + + + R + +YE A + NF+ A
Sbjct: 1 MMRKLSLPKIFLAAAIIALGGCSSSPDEEEVV---VNNRSAQSLYEDAKEKMAIGNFNAA 57
Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
+ +PF ++ + L + Y +GK +A S + + P +VDY Y+
Sbjct: 58 TATLSALDSRYPFGPLSNQVQLDLIYAYYKSGKVNEAISTIDRFTRLNPNHADVDYAIYM 117
Query: 137 VGMSYAQMIRDVPYD----------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
G++ + +++ + ++ + R++++Y +S Y A+ + +
Sbjct: 118 RGLTNMESDKNLFQELVGIDRSDRDPSKSREAFEDFRRLIDKYPDSKYAADAQKRMLHIK 177
Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
++LA E+ I R+Y++R +VAA R + VL Y D +H +EA+ +VE Y L L +
Sbjct: 178 SRLAKYEIAIARFYMRREAFVAAANRGRYVLEYYPDTDHVQEALEIMVECYDQLKLDELK 237
Query: 247 REVVSLIQERYPQGYW 262
V+ ++ YP +
Sbjct: 238 NNVMKTLKLNYPDSSF 253
>gi|50085932|ref|YP_047442.1| putative competence protein (ComL) [Acinetobacter sp. ADP1]
gi|49531908|emb|CAG69620.1| putative competence protein (ComL) [Acinetobacter sp. ADP1]
Length = 351
Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats.
Identities = 57/250 (22%), Positives = 107/250 (42%), Gaps = 12/250 (4%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
YK + +VG ++V ++ ++KA L +++A +
Sbjct: 6 YKITMLALSLGVAAAMVGCSSNPKKEVVDTGP--QSSEQIYFQKAEKALDRGQYTEAAKS 63
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
+P A ++ L +V++ +Y+ S + +I P+ N+DYVYY+ G+
Sbjct: 64 LEAIDTYYPTGQYAAQAQLDLLYVKFQQKEYETVVSQADRFIRLNPQHPNIDYVYYIRGV 123
Query: 140 SYAQMIR----------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
+ ++ D KL Q ++ R+ +SPY A + +L
Sbjct: 124 ANMELNYDSLMRYTSLQQSHRDTSYMKLAYQNFVDLIRRFPSSPYSVDAAQRMKFIGQEL 183
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
A E+ + R+ +KR +VAAI R Q V+ ++ EA+A L AY L +++
Sbjct: 184 AESEMNVARFNIKRKAWVAAIDRAQWVVEHFPQTPQTPEALATLAYAYNELGDQATSQQY 243
Query: 250 VSLIQERYPQ 259
V+L++ YP
Sbjct: 244 VNLLKLNYPD 253
>gi|94310294|ref|YP_583504.1| hypothetical protein Rmet_1352 [Cupriavidus metallidurans CH34]
gi|93354146|gb|ABF08235.1| DNA uptake lipoprotein [Cupriavidus metallidurans CH34]
Length = 278
Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats.
Identities = 59/254 (23%), Positives = 106/254 (41%), Gaps = 14/254 (5%)
Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85
I + L + T ++Y +A L ++++A + + +
Sbjct: 20 ILLAGGCVMLSACGLLGDQ----PDETAGWSANKLYSEAKDALDGGDYTRAVKLYEKLEG 75
Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
+PF A+++ + +A+ Y G+ A + + +I +P N+DY YYL G+
Sbjct: 76 RYPFGRYAQQAQIDTAYANYKDGETAAALAAVDRFIQLHPSHPNIDYAYYLKGLINFNDN 135
Query: 146 RDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
D +A + ++ RY +S Y A + N LA EV
Sbjct: 136 LGWLGRFSGQDLSERDPKAARAAYDAFQILITRYPDSKYTPDATLRMQYIVNSLAQHEVH 195
Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
RYY +RG Y+AA+ R Q L +Y A EEA+ +V +Y AL + D + +++
Sbjct: 196 AARYYYRRGAYLAAVNRAQQALKDYDGAPANEEALYIMVRSYDALGMKDLRDDAARVMER 255
Query: 256 RYPQGYWARYVETL 269
YP + +Y +
Sbjct: 256 NYPNSDYIKYGQRR 269
>gi|56478104|ref|YP_159693.1| putative competence lipoprotein precursor [Aromatoleum aromaticum
EbN1]
gi|56314147|emb|CAI08792.1| putative competence lipoprotein precursor [Aromatoleum aromaticum
EbN1]
Length = 265
Score = 105 bits (261), Expect = 7e-21, Method: Composition-based stats.
Identities = 61/255 (23%), Positives = 111/255 (43%), Gaps = 14/255 (5%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + IA L G + T + +Y +A F+ E + +A +
Sbjct: 1 MARVTFRSLAVIAALLLGGCGSMPEQI----DETAGWNAQRLYSEAKTFMNEGAYEQAIK 56
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
F + +P+ A+++ + A+ QY +G+ A + + +I +P N DY YYL G
Sbjct: 57 LFEKLEARYPYGRYAQQAQIEVAYAQYKSGEPALAIAAADRFIKLHPNHPNADYAYYLKG 116
Query: 139 MSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
++ D + + ++V+R+ S Y + A + N
Sbjct: 117 LATFNEDLGLLAGLSNQDLSERDPKGAQESFDTFGQLVKRFPESRYAEDAGQRMQYLVNS 176
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
LAA EV + RYY +RG YVAA+ R + L Y A AEEA+ LV++Y L + + +
Sbjct: 177 LAAHEVHVARYYYRRGAYVAAVNRARTALETYPQAPAAEEALFVLVKSYDTLGMTELRDD 236
Query: 249 VVSLIQERYPQGYWA 263
++++ +P +
Sbjct: 237 ADRVMRKNFPNSVYF 251
>gi|255318858|ref|ZP_05360084.1| DNA uptake lipoprotein [Acinetobacter radioresistens SK82]
gi|262378884|ref|ZP_06072041.1| conserved hypothetical protein [Acinetobacter radioresistens SH164]
gi|255304114|gb|EET83305.1| DNA uptake lipoprotein [Acinetobacter radioresistens SK82]
gi|262300169|gb|EEY88081.1| conserved hypothetical protein [Acinetobacter radioresistens SH164]
Length = 343
Score = 105 bits (260), Expect = 8e-21, Method: Composition-based stats.
Identities = 61/250 (24%), Positives = 104/250 (41%), Gaps = 12/250 (4%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
YK + LVG ++V ++ + KA L+ +S A +
Sbjct: 6 YKVTMLALSLGIASALVGCSSNPKKEVVDTGP--QSSEQVYFNKAERALERGQYSDAAKQ 63
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
FP A+++ L +V++ Y+ A +L E +I P+ NVDY YY+ G+
Sbjct: 64 LEALDTYFPTGQYAQQAQLELLYVKFQQKDYEGAIALAERFIRLNPQHPNVDYAYYVRGV 123
Query: 140 SYAQMIR----------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
+ + D K+ Q + RY +S Y A + +L
Sbjct: 124 ANMEQNYDGLLRYTSLQQSHRDVSYLKVAYQNFVDFIRRYPSSQYAVDAAQRMKFIGQEL 183
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
A E+ + RY LKR +VAA+ R Q V+ +Y EA+A + AY L +++
Sbjct: 184 AENEMNVARYNLKRKAWVAALERAQWVVEHYPQTPQIPEALATMAYAYDKLGDQASSQQY 243
Query: 250 VSLIQERYPQ 259
V +++ YP+
Sbjct: 244 VEVLKLNYPE 253
>gi|89067817|ref|ZP_01155261.1| competence lipoprotein ComL, putative [Oceanicola granulosus
HTCC2516]
gi|89046415|gb|EAR52471.1| competence lipoprotein ComL, putative [Oceanicola granulosus
HTCC2516]
Length = 284
Score = 105 bits (260), Expect = 9e-21, Method: Composition-based stats.
Identities = 68/234 (29%), Positives = 115/234 (49%), Gaps = 3/234 (1%)
Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
+ D E++E+ L A YF + R +P++ A+++
Sbjct: 26 SCGIFDPKQ---PGALDAYSAAEIFERGEYELARGQADDAAFYFGEIERLYPYSEFAKRA 82
Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
L+M A + Y A + + +I YP + Y YL+ +SY I ++ DQ T
Sbjct: 83 LIMQAAAYHQDRDYPNARAAAQRFIDFYPADPDAAYAQYLLALSYYDQIDEIGRDQGLTF 142
Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
LQ + ++E Y +S Y + A + + LAAKE+E+GR+YLKR + AA+ RF++V
Sbjct: 143 QALQALRTVIEVYPDSEYARAAIPKFDLAFDHLAAKEMEVGRFYLKRDHFAAAVNRFRVV 202
Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
+ ++ H EA+ RLVEAY++L L DEA+ +++ Y W + L+
Sbjct: 203 VEDFQTTAHTAEALHRLVEAYLSLGLTDEAQTAGAILGHNYRSTEWYQESFALL 256
>gi|91794215|ref|YP_563866.1| putative lipoprotein [Shewanella denitrificans OS217]
gi|91716217|gb|ABE56143.1| putative lipoprotein [Shewanella denitrificans OS217]
Length = 253
Score = 104 bits (259), Expect = 9e-21, Method: Composition-based stats.
Identities = 49/254 (19%), Positives = 96/254 (37%), Gaps = 14/254 (5%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+YKFA + + + + +Y +A ++ N+SKA
Sbjct: 1 MYKFAKGAALVMLSLAITACSSSPEDADIANK----KSPEALYAQARTSMELGNYSKAAR 56
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+PF + L F Y + + ++ P N+DYV+Y+ G
Sbjct: 57 SLEALDSRYPFGPHKTQVQLDLIFAYYKMDDAASGLANIDRFLRLNPTHPNIDYVHYMRG 116
Query: 139 MSYAQMIRDVPYDQRATK----------LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
++ Q + +D + ++++ Y NS Y A+ + +N+
Sbjct: 117 LTNMQADNYLFHDMLDIDRTDRDTKNAQDAFKDFDKLIKSYPNSKYAADAQQRMQYLKNR 176
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
LA V + YY+K + AA R Q V+ + + E A+ + EAY L +
Sbjct: 177 LANYSVIVAEYYIKMNAWSAAAVRAQTVMEKFPNTPSTERALEIMAEAYQELGQTQLKQN 236
Query: 249 VVSLIQERYPQGYW 262
V+++++ +P
Sbjct: 237 VLTVLKANFPSNEM 250
>gi|260553982|ref|ZP_05826247.1| competence lipoprotein comL [Acinetobacter sp. RUH2624]
gi|260404868|gb|EEW98373.1| competence lipoprotein comL [Acinetobacter sp. RUH2624]
Length = 373
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 56/250 (22%), Positives = 103/250 (41%), Gaps = 11/250 (4%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
YK + VG S+ +D+ ++ +EKA L + +A +
Sbjct: 6 YKITMLALSLGVASAFVGCSSNPSKKEVVDTGPQ-SSEQAYFEKAQKSLDRGQYLEATKS 64
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
+P A+++ L + ++ Y+ A +L E +I P+ NVDY YY+ G+
Sbjct: 65 LEAIDTYYPTGQYAQQAQLELLYSKFKQKDYEGAIALAERFIRLNPQHPNVDYAYYVRGV 124
Query: 140 SYAQMIR----------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
S ++ D K+ Q ++ R+ +S Y A + +L
Sbjct: 125 SNMELNYDSLLRYTSLQQSHRDISYLKVAYQNFVDLIRRFPSSQYSVDAAQRMKFIGQEL 184
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
A E+ R+ +KR +VAA R Q V+ +Y EA+A L +Y L +++
Sbjct: 185 AESEMNAARFNVKRKAWVAAAERSQWVIEHYPQTPQIPEALATLAYSYDQLGDKATSQQY 244
Query: 250 VSLIQERYPQ 259
+ +++ YP
Sbjct: 245 IEVLKLNYPS 254
>gi|152980898|ref|YP_001353082.1| competence lipoprotein ComL [Janthinobacterium sp. Marseille]
gi|151280975|gb|ABR89385.1| competence lipoprotein ComL [Janthinobacterium sp. Marseille]
Length = 261
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 57/252 (22%), Positives = 102/252 (40%), Gaps = 14/252 (5%)
Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
L I L + T ++Y +A + +++KA +F +
Sbjct: 1 MLKITIVALAFLLSACSLTPDKF----DETKNWSPSKLYSEAREEMNVGDYAKAVSHFEK 56
Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV----- 137
+PF A+++ + A+ Y G QA + E +I +P+ NVDY+YYL
Sbjct: 57 LESRYPFGTYAQQAQMEIAYAYYRQGDQPQALAAVERFIKLHPDHPNVDYMYYLRGLINF 116
Query: 138 -----GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
+ D +A + + ER+ +S Y A + N +A
Sbjct: 117 NDKVSIFDFVSRQDPTERDPKAAREAFDSFKLLTERFPDSKYTPDATARLAYLVNGMAQY 176
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+V + YY +RG Y+AA+ R Q + NY A E A+ ++ +Y AL L + +
Sbjct: 177 DVHVANYYYRRGAYLAAVNRAQSAVKNYPGAPAVEGALYVMIRSYDALNLPQLRDDAERV 236
Query: 253 IQERYPQGYWAR 264
++ +P + R
Sbjct: 237 MKTNFPDSVYFR 248
>gi|198282732|ref|YP_002219053.1| outer membrane assembly lipoprotein YfiO [Acidithiobacillus
ferrooxidans ATCC 53993]
gi|198247253|gb|ACH82846.1| outer membrane assembly lipoprotein YfiO [Acidithiobacillus
ferrooxidans ATCC 53993]
Length = 261
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 54/243 (22%), Positives = 104/243 (42%), Gaps = 2/243 (0%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
+ + + G + +S R +++ A + +++ A +
Sbjct: 10 FMSKRILMSLCCAALIAGCASTPNN--PDNSAVSHESARALFQPAKHAMDRGDYAAAIKL 67
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
F +P+ A ++ L +A+ Y G + AA+ E +I +P + VDY +YL G+
Sbjct: 68 FEDLETRYPYGPYAEQAQLDTAYSYYQRGDSEAAAAAAERFIKLHPANPYVDYAWYLKGI 127
Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
+Y Q I+ + R + + + +R+ +S Y AR + N L + ++I ++
Sbjct: 128 AYYQAIQGAQENPRPAEEAFSTLDTLAKRWPHSVYAADARLRMAKIINILGQRNLDICKF 187
Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
Y R YVA+ R V+ Y + EEA+ L Y L L A+ V+++ YP
Sbjct: 188 YYVRHAYVASANRCNTVITRYQLSTAREEALYYLTRDYRHLDLPQLAQTTVAVLAYNYPG 247
Query: 260 GYW 262
+
Sbjct: 248 SKY 250
>gi|294676385|ref|YP_003577000.1| competence lipoprotein ComL [Rhodobacter capsulatus SB 1003]
gi|294475205|gb|ADE84593.1| competence lipoprotein ComL [Rhodobacter capsulatus SB 1003]
Length = 281
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 75/229 (32%), Positives = 125/229 (54%), Gaps = 3/229 (1%)
Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNF---SKAYEYFNQCSRDFPFAGVARKSLLMSAF 102
+ + E+Y++ L+ N ++A YF++ R +P++ A+++L+M AF
Sbjct: 26 TQKEPPLENFTAEEIYKRGEYELEVGNPRRPAEALRYFSEVERLYPYSEYAKRALIMEAF 85
Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
Q+ A KY+ A S + Y+ YP S++ Y YL+ +SY I +V DQ T LQ +
Sbjct: 86 AQHKAKKYEDARSSAQRYLDTYPGSEDAAYAKYLLALSYYDQIDEVGRDQGLTFQALQAL 145
Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
++E Y +S Y + A + + LA+KE+EIGR+YLK+G Y AAI RF++V+ Y
Sbjct: 146 RAVIEEYPDSDYARSAALKFDLAFDHLASKEMEIGRFYLKKGHYTAAINRFRVVVEQYQT 205
Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
H EA+ RLVE Y++L L DEA+ +++ + + +K
Sbjct: 206 TTHTPEALMRLVECYLSLGLTDEAQTAGAILGHNFQSSPFYDDAYKRLK 254
>gi|146283957|ref|YP_001174110.1| competence protein ComL [Pseudomonas stutzeri A1501]
gi|145572162|gb|ABP81268.1| competence protein ComL [Pseudomonas stutzeri A1501]
Length = 374
Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 62/244 (25%), Positives = 101/244 (41%), Gaps = 17/244 (6%)
Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85
+ ++V + + E+Y++A L ++++ A
Sbjct: 51 LLLIAIFALTAACSSN-------ETVDENLGEVELYQQAQADLDNKSYTSAISKLKALES 103
Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
+PF A ++ L + Y + + A S E +I +P+ NVDY YYL G++
Sbjct: 104 RYPFGRFAEQAQLELIYAYYRNAEPEAARSAAERFIRLHPQHPNVDYAYYLKGLASFDQD 163
Query: 146 R----------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
R D A + +++ RY NS Y A+ + RN LAA E+
Sbjct: 164 RGLLARFLPLDMTKRDPGAARDSFNEFAQLTSRYPNSRYSPDAKARMIYLRNLLAANEIH 223
Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
+ YYLKR YVAA R + V+ N+ + +A + EAY L L D A + +Q
Sbjct: 224 VAHYYLKRQAYVAAANRGRYVVENFQGTPAVADGLAVMTEAYQRLGLDDLADASLKTLQL 283
Query: 256 RYPQ 259
YP
Sbjct: 284 NYPD 287
Score = 38.2 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 18/76 (23%), Positives = 29/76 (38%)
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+ + L Y +AI + + + + Y AE+A L+ AY A + AR
Sbjct: 79 YQQAQADLDNKSYTSAISKLKALESRYPFGRFAEQAQLELIYAYYRNAEPEAARSAAERF 138
Query: 254 QERYPQGYWARYVETL 269
+PQ Y L
Sbjct: 139 IRLHPQHPNVDYAYYL 154
>gi|332283690|ref|YP_004415601.1| competence lipoprotein precursor [Pusillimonas sp. T7-7]
gi|330427643|gb|AEC18977.1| competence lipoprotein precursor [Pusillimonas sp. T7-7]
Length = 258
Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 57/245 (23%), Positives = 100/245 (40%), Gaps = 14/245 (5%)
Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90
A + G T +Y+ A + N++ A +PF
Sbjct: 2 AAILIAGCGSTKVEK----DPTTGWSAERLYQDARAEISAGNWNDARTRLEAIEARYPFG 57
Query: 91 GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV----------GMS 140
G A+++L+ A+V + G+ +QA + + + QYP DY+ YL +
Sbjct: 58 GYAQQALIDQAYVNWKDGEPEQALAAIDRFQQQYPNHPGTDYMLYLKGLVTFTPPSASFT 117
Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
D + + + ++ RY +S Y A+ VT N +A EV + YY
Sbjct: 118 NITRQDPSERDPKGLRESYDSFNELIARYPDSRYTADAKKRVTWLVNTIAQNEVHVATYY 177
Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
+RG YVAAI R Q V+ ++ +E+A+ +V AY L L + + ++ E +P
Sbjct: 178 YERGAYVAAINRAQTVVTDFQGVPASEKALYIMVLAYDKLQLPELRDDAKRVLDENFPNS 237
Query: 261 YWARY 265
+
Sbjct: 238 KYYEQ 242
>gi|73541037|ref|YP_295557.1| transmembrane protein [Ralstonia eutropha JMP134]
gi|72118450|gb|AAZ60713.1| probable transmembrane protein [Ralstonia eutropha JMP134]
Length = 271
Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 59/254 (23%), Positives = 108/254 (42%), Gaps = 14/254 (5%)
Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85
I + L + + T ++Y +A L ++S+A + + +
Sbjct: 13 ILLAGGCVMLSACGLLADQ----PDETAGWSANKLYSEAKDALDGGDYSRAVKLYEKLEG 68
Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
+PF A+++ + +A+ Y G+ A + + +I +P N+DY YYL G+
Sbjct: 69 RYPFGRYAQQAQIDTAYASYKDGETAAALAAVDRFIQLHPSHPNIDYAYYLKGLINFNDN 128
Query: 146 RDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
D +A + + +V R+ +S Y A + N LA EV
Sbjct: 129 LGWLGRFSGQDLSERDPKAARAAYDAFNTLVTRFPDSKYTPDAAARMQYIVNSLAQHEVH 188
Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
RYY KRG Y+AA+ R Q L +Y A EEA+ ++ +Y +L + D + +++
Sbjct: 189 AARYYYKRGAYLAAVNRAQQALKDYDGAPANEEALYIMIRSYDSLGMKDLRDDTARVMER 248
Query: 256 RYPQGYWARYVETL 269
+P + +Y E
Sbjct: 249 NFPNSDYIKYGERR 262
>gi|218666506|ref|YP_002424926.1| competence lipoprotein ComL, putative [Acidithiobacillus
ferrooxidans ATCC 23270]
gi|218518719|gb|ACK79305.1| competence lipoprotein ComL, putative [Acidithiobacillus
ferrooxidans ATCC 23270]
Length = 251
Score = 104 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 54/240 (22%), Positives = 103/240 (42%), Gaps = 2/240 (0%)
Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
+ + G + +S R +++ A + +++ A + F
Sbjct: 3 KRILMSLCCAALIAGCASTPNN--PDNSAVSHESARALFQPAKHAMDRGDYAAAIKLFED 60
Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
+P+ A ++ L +A+ Y G + AA+ E +I +P + VDY +YL G++Y
Sbjct: 61 LETRYPYGPYAEQAQLDTAYSYYQRGDSEAAAAAAERFIKLHPANPYVDYAWYLKGIAYY 120
Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
Q I+ + R + + + +R+ +S Y AR + N L + ++I ++Y
Sbjct: 121 QAIQGAQENPRPAEEAFSTLDTLAKRWPHSVYAADARLRMAKIINILGQRNLDICKFYYV 180
Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
R YVA+ R V+ Y + EEA+ L Y L L A+ V+++ YP +
Sbjct: 181 RHAYVASANRCNTVITRYQLSTAREEALYYLTRDYRHLDLPQLAQTTVAVLAYNYPGSKY 240
>gi|113867447|ref|YP_725936.1| DNA uptake lipoprotein [Ralstonia eutropha H16]
gi|113526223|emb|CAJ92568.1| DNA uptake lipoprotein [Ralstonia eutropha H16]
Length = 276
Score = 104 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 56/250 (22%), Positives = 106/250 (42%), Gaps = 14/250 (5%)
Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85
+ + L + + T ++Y +A L ++++A + + +
Sbjct: 18 VLLAGGCVMLSACGLLADQ----PDETAGWSANKLYSEAKDALDGGDYTRAVKLYEKLEG 73
Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
+PF A+++ + +A+ Y G+ A + + +I +P N+DY YYL G+
Sbjct: 74 RYPFGRYAQQAQIDTAYANYKDGETAAALAAVDRFIQLHPNHPNIDYAYYLKGLINFNDN 133
Query: 146 RDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
D +A + + ++ RY S Y A + N LA EV
Sbjct: 134 LGWLGRFSGQDLSERDPKAARAAYDAFNTLITRYPESKYTPDATLRMQYIVNSLAQHEVH 193
Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
RYY +RG Y+AA+ R Q L +Y A EEA+ +V +Y A+ + D + +++
Sbjct: 194 AARYYYRRGAYLAAVNRAQQALKDYDGAPANEEALYIMVRSYDAMGMKDLRDDTARVMER 253
Query: 256 RYPQGYWARY 265
+P + +Y
Sbjct: 254 NFPDSDFIKY 263
>gi|194289463|ref|YP_002005370.1| lipoprotein, coml family, tetratricopeptide repeats (tpr) domain
[Cupriavidus taiwanensis LMG 19424]
gi|193223298|emb|CAQ69303.1| putative lipoprotein, ComL family, tetratricopeptide repeats (TPR)
domain [Cupriavidus taiwanensis LMG 19424]
Length = 276
Score = 104 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 55/250 (22%), Positives = 107/250 (42%), Gaps = 14/250 (5%)
Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85
+ + L + + T ++Y +A L ++++A + + +
Sbjct: 18 VLLAGGCVMLSACGLLADQ----PDETAGWSANKLYSEAKDALDGGDYTRAVKLYEKLEG 73
Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
+PF A+++ + +A+ Y G+ A + + +I +P N+DY YYL G+
Sbjct: 74 RYPFGRYAQQAQIDTAYANYKDGETAAALAAVDRFIQLHPNHPNIDYAYYLKGLINFNDN 133
Query: 146 RDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
D +A + ++ RY S Y A + N LA EV
Sbjct: 134 LGWLGRFSGQDLSERDPKAARAAYDAFHTLITRYPESKYTPDATLRMQYIVNSLAQHEVH 193
Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
RYY +RG Y+AA+ R Q L +Y A EEA+ ++ +Y A+ + D + ++++
Sbjct: 194 AARYYFRRGAYLAAVNRAQQSLKDYDGAPANEEALYIMIRSYDAMGMKDLRDDTARVMEK 253
Query: 256 RYPQGYWARY 265
+P+ + +Y
Sbjct: 254 NFPESDFIKY 263
>gi|332307417|ref|YP_004435268.1| outer membrane assembly lipoprotein YfiO [Glaciecola agarilytica
4H-3-7+YE-5]
gi|332174746|gb|AEE24000.1| outer membrane assembly lipoprotein YfiO [Glaciecola agarilytica
4H-3-7+YE-5]
Length = 255
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 59/256 (23%), Positives = 117/256 (45%), Gaps = 14/256 (5%)
Query: 18 QLYKFAL-TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76
+ K +L +F + A+ L G + + + R + +YE A + NF+ A
Sbjct: 1 MMRKLSLPKVFLAAAIIALGGCSSSLDEEEVV---VNNRSAQSLYEDAKEKMAIGNFNAA 57
Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
+ +PF ++ + L + Y +GK +A S + + P +VDY Y+
Sbjct: 58 TATLSALDSRYPFGPLSNQVQLDLIYAYYKSGKVNEAISTIDRFTRLNPNHADVDYAIYM 117
Query: 137 VGMSYAQMIRDVPYD----------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
G++ + +++ + ++ + R++E++ +S Y A+ + +
Sbjct: 118 RGLTNMESDKNLFQELVGIDRSDRDPSKSREAFEDFRRLIEKFPDSKYAADAQKRMLHIK 177
Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
++LA E+ I R+Y++R YVAA R + VL Y D +H +EA+ +VE Y L L +
Sbjct: 178 SRLAKYEIAIARFYMRREAYVAAANRGRYVLEYYPDTDHVQEALEIMVECYDQLKLDELK 237
Query: 247 REVVSLIQERYPQGYW 262
V+ ++ YP +
Sbjct: 238 NNVMKTLKLNYPDSSF 253
>gi|257095461|ref|YP_003169102.1| outer membrane assembly lipoprotein YfiO [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257047985|gb|ACV37173.1| outer membrane assembly lipoprotein YfiO [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 264
Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats.
Identities = 60/227 (26%), Positives = 103/227 (45%), Gaps = 10/227 (4%)
Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
T ++Y +A L + +++KA +YF + +P+ A+++ + A+ +
Sbjct: 26 KDETIGWSANKLYAEAKDALNDGSYAKAIKYFEKLESRYPYGRYAQQAQIEIAYAYWKDQ 85
Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLV----------GMSYAQMIRDVPYDQRATKLM 158
+ A + + +I +P NVDYVYYL M D + +
Sbjct: 86 EPASAVAACDRFIKLHPNHPNVDYVYYLRGLINFNEDLGIMGTISNQDMTERDPKGARES 145
Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
+V R+ +S Y A + N LA+ E+ + RYY+KRG Y+AA R Q +
Sbjct: 146 FDAFRELVTRFPDSKYTPDALLRMKYLVNALASLELHVARYYMKRGAYLAAANRAQYAVK 205
Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
NY DA EEA+ +V+AY +L L D + +++ YP + R
Sbjct: 206 NYPDAPATEEALFIMVKAYDSLGLNDLRDDAERVMRTNYPNSDYYRR 252
>gi|332876322|ref|ZP_08444095.1| outer membrane assembly lipoprotein YfiO [Acinetobacter baumannii
6014059]
gi|322507011|gb|ADX02465.1| Putative competence protein [Acinetobacter baumannii 1656-2]
gi|323516879|gb|ADX91260.1| DNA uptake lipoprotein [Acinetobacter baumannii TCDC-AB0715]
gi|332735473|gb|EGJ66527.1| outer membrane assembly lipoprotein YfiO [Acinetobacter baumannii
6014059]
Length = 376
Score = 103 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 56/247 (22%), Positives = 104/247 (42%), Gaps = 12/247 (4%)
Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
L + +A F VG S+ +D+ ++ ++KA L + A +
Sbjct: 1 MLALSLGVASAF-VGCSSNPSKKEVVDTGPQ-SSEQAYFDKAQKALDRGQYLDATKSLEA 58
Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
+P A+++ L + ++ Y+ A +L E +I P+ NVDY YY+ G+S
Sbjct: 59 IDTYYPTGQYAQQAQLELLYSKFKQKDYEGAIALAERFIRLNPQHPNVDYAYYVRGVSNM 118
Query: 143 QMIR----------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
+M D K+ Q ++ R+ +S Y A + +LA
Sbjct: 119 EMNYDSLLRYTSLQQSHRDVSYLKVAYQNFVDLIRRFPSSQYSVDAAQRMKFIGQELAES 178
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
E+ R+ +KR ++AA R Q V+ +Y EA+A L +Y L +++ + +
Sbjct: 179 EMNAARFNVKRKAWIAAAERSQWVIEHYPQTPQVPEALATLAYSYDQLGDKATSQQYIEV 238
Query: 253 IQERYPQ 259
++ YP
Sbjct: 239 LKLNYPS 245
>gi|255019803|ref|ZP_05291879.1| Probable component of the lipoprotein assembly complex (forms a
complex with YaeT, YfgL, and NlpB) [Acidithiobacillus
caldus ATCC 51756]
gi|254970732|gb|EET28218.1| Probable component of the lipoprotein assembly complex (forms a
complex with YaeT, YfgL, and NlpB) [Acidithiobacillus
caldus ATCC 51756]
Length = 249
Score = 103 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 57/249 (22%), Positives = 109/249 (43%), Gaps = 4/249 (1%)
Query: 19 LYKFALTIFF--SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76
+ K + + L G ++D + +Y A ++S A
Sbjct: 1 MRKRIIFPIVAHLTLLGVLSGCASDGAKDSL--KESSHLSAAAMYRPAKAAQDRGDYSSA 58
Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
+ + +P+ A ++ L +A+ Y G + AA+ E +I +P + VDY +YL
Sbjct: 59 VRLYEELETRYPYGPYAEQAQLNTAYCYYKQGDSEAAAAAAERFIKLHPVNPFVDYAWYL 118
Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196
G++Y Q I+ ++ + + + +V+R+ NS Y AR + + L +E++I
Sbjct: 119 KGIAYYQAIQGAQWNPKPLEESFATLETLVKRWPNSAYAADARLRMEKIIDILGQRELDI 178
Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
++Y R YVAA R V+ Y + EEA+ L +Y + L A+ +++
Sbjct: 179 CKFYYIRHAYVAAANRCNDVVTRYQLSPAREEALYYLSLSYRHMNLDGLAKTTAGVLKAN 238
Query: 257 YPQGYWARY 265
YPQ + +
Sbjct: 239 YPQSKYLKE 247
>gi|332855565|ref|ZP_08435939.1| outer membrane assembly lipoprotein YfiO [Acinetobacter baumannii
6013150]
gi|332868376|ref|ZP_08438122.1| outer membrane assembly lipoprotein YfiO [Acinetobacter baumannii
6013113]
gi|332727389|gb|EGJ58822.1| outer membrane assembly lipoprotein YfiO [Acinetobacter baumannii
6013150]
gi|332733435|gb|EGJ64616.1| outer membrane assembly lipoprotein YfiO [Acinetobacter baumannii
6013113]
Length = 376
Score = 103 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 56/247 (22%), Positives = 104/247 (42%), Gaps = 12/247 (4%)
Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
L + +A F VG S+ +D+ ++ ++KA L + A +
Sbjct: 1 MLALSLGVASAF-VGCSSNPSKKEVVDTGPQ-SSEQAYFDKAQKALDRGQYLDATKSLEA 58
Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
+P A+++ L + ++ Y+ A +L E +I P+ NVDY YY+ G+S
Sbjct: 59 IDTYYPTGQYAQQAQLELLYSKFKQKDYEGAIALAERFIRLNPQHPNVDYAYYVRGVSNM 118
Query: 143 QMIR----------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
+M D K+ Q ++ R+ +S Y A + +LA
Sbjct: 119 EMNYDSLLRYTSLQQSHRDVSYLKVAYQNFVDLIRRFPSSQYSVDAAQRMKFIGQELAES 178
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
E+ R+ +KR ++AA R Q V+ +Y EA+A L +Y L +++ + +
Sbjct: 179 EMNAARFNVKRKAWIAAAERSQWVIEHYPQTPQVPEALATLAYSYDQLGDKATSQQYIEV 238
Query: 253 IQERYPQ 259
++ YP
Sbjct: 239 LKLNYPS 245
>gi|86137669|ref|ZP_01056246.1| competence lipoprotein ComL, putative [Roseobacter sp. MED193]
gi|85826004|gb|EAQ46202.1| competence lipoprotein ComL, putative [Roseobacter sp. MED193]
Length = 282
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 68/220 (30%), Positives = 117/220 (53%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
+ ++++E+ L A YF++ R +P++ A+++L+M AF + + Y
Sbjct: 35 PLESYTPQQIFERGEFELARSRTKDAAFYFSEIERLYPYSEFAKQALIMQAFANHQSKDY 94
Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
+ + + +I YP ++ Y YL+ +SY I +V DQ T LQ + ++E Y
Sbjct: 95 EASRGAAQRFIDFYPTDEDAAYAQYLLALSYYDQIDEVGRDQGLTFQALQSLRTVIEVYP 154
Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
+S Y A + + LA KE+EIGRYYL+RG Y +AI RF++V+ ++ H EA+
Sbjct: 155 DSEYATSAILKFDLAFDHLAGKEMEIGRYYLRRGHYTSAISRFRVVVEDFQTTSHTAEAL 214
Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
RLVEAY++L L +EA+ +++ Y W L+
Sbjct: 215 HRLVEAYLSLGLTEEAQTAGAILGHNYQSTDWYEDSYKLL 254
>gi|294142198|ref|YP_003558176.1| hypothetical protein SVI_3427 [Shewanella violacea DSS12]
gi|293328667|dbj|BAJ03398.1| conserved hypothetical protein [Shewanella violacea DSS12]
Length = 253
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 50/253 (19%), Positives = 94/253 (37%), Gaps = 14/253 (5%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
++KFA ++ + ++ +Y +A ++ N+SKA
Sbjct: 1 MHKFAKGAVLALFSIAITACSSSPDEELKASKT----SPDVLYSQARTSMELGNYSKAVR 56
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+PF + L + Y + + +I P K++DYVYY+ G
Sbjct: 57 SLEALDSRYPFGPHKTQVQLDLIYAYYKLDDPASGIANIDRFIRLNPTHKDIDYVYYMRG 116
Query: 139 MSYAQMIRDVPYDQRATK----------LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
+ Q + +D + R+++ Y NS Y A + +N+
Sbjct: 117 LVNMQSDSYMFHDMLNIDRTDRDPQVAINAFKDFDRLIKSYPNSKYANDAAERMQYLKNR 176
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
LA + + YY+K + AA R Q V+ Y E A+ + +AY L
Sbjct: 177 LAKYSINVAEYYMKMNAWSAAAIRAQSVMETYPGTSSTERALEIMADAYGELGQEKLKNN 236
Query: 249 VVSLIQERYPQGY 261
V+++++ YP
Sbjct: 237 VLTVMKANYPDNK 249
>gi|241663188|ref|YP_002981548.1| outer membrane assembly lipoprotein YfiO [Ralstonia pickettii 12D]
gi|240865215|gb|ACS62876.1| outer membrane assembly lipoprotein YfiO [Ralstonia pickettii 12D]
Length = 285
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 56/249 (22%), Positives = 106/249 (42%), Gaps = 14/249 (5%)
Query: 30 IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89
+A + + T ++Y +A L +++KA +Y+ + +PF
Sbjct: 31 VACLAISACGILPEQQ----DETAGWSANKLYSEAKDSLDGGDYAKAVKYYEKLESRYPF 86
Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
A+++ + +A+ Y G+ A + + +I +P +VDY YYL G+
Sbjct: 87 GPYAQQAQIETAYANYKDGETAAALAAVDRFIQLHPNHPSVDYAYYLKGLINFNDNLGWL 146
Query: 150 YDQRAT----------KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
+ ++ R+ NS Y A + N +A EV RY
Sbjct: 147 GRFSNQDLSERDPKAARAAYDAFKTLITRFPNSKYTPDATQRMQYIVNAMAEHEVGAARY 206
Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
Y +RG Y+AA+ R Q + +Y A EEA+ ++++Y AL + D + +I++ YP+
Sbjct: 207 YYRRGAYLAAVNRAQDAIKDYDRAPAVEEALYIMMKSYEALGMKDMRDDTERIIKQNYPK 266
Query: 260 GYWARYVET 268
+ Y +
Sbjct: 267 SDFLAYGQR 275
>gi|292490723|ref|YP_003526162.1| outer membrane assembly lipoprotein YfiO [Nitrosococcus halophilus
Nc4]
gi|291579318|gb|ADE13775.1| outer membrane assembly lipoprotein YfiO [Nitrosococcus halophilus
Nc4]
Length = 260
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 56/259 (21%), Positives = 105/259 (40%), Gaps = 13/259 (5%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
V +L G + Y +A L N+ +A +
Sbjct: 1 MRIFYFLSLFLVLWLGGCSWLGK---PQEQPEADWNVERYYSEAKAALNSGNYQQAITLY 57
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
Q +PF A+++LL SA+ Y + + A + + +I YP + ++DY +YL G+
Sbjct: 58 EQLEARYPFGVYAQQALLESAYAYYKFDEPESALAALDRFIRLYPLNPHMDYAHYLKGLV 117
Query: 141 YAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
+ D + + L+ +V+R+ +S Y K + RN+LA
Sbjct: 118 NFHRGIGLIEKYIPRDESQRDPESARDALKDFRTLVKRFPDSRYAKDGAQRIVYLRNRLA 177
Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
E+ + +YY++RG Y+ AI R + V+ NY EA+ + Y L L + A + +
Sbjct: 178 QHEINVAQYYMRRGAYIGAINRAKYVVENYQRTPTVPEALTIMARGYKVLGLDELAEDTL 237
Query: 251 SLIQERYPQGYWARYVETL 269
+++ +P +
Sbjct: 238 RVLETNFPGHPGIAQARQI 256
>gi|313201440|ref|YP_004040098.1| outer membrane assembly lipoprotein yfio [Methylovorus sp. MP688]
gi|312440756|gb|ADQ84862.1| outer membrane assembly lipoprotein YfiO [Methylovorus sp. MP688]
Length = 268
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 58/246 (23%), Positives = 111/246 (45%), Gaps = 11/246 (4%)
Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
IAV +L G + + T + +Y +A ++ +++ KA +YF +P
Sbjct: 7 FIAVLWLSGCAIFGAPTELDE--TKGWSAQRIYTEADEKMRSRDYEKAIKYFETLESRYP 64
Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ----- 143
A ++ + + Y + + +I +P+ N+DY YY+ G++
Sbjct: 65 HGRFATQAQMDKIYAYYKRNDPISTIAAADRFIKLHPDHPNIDYAYYMKGLATFNERGVI 124
Query: 144 ----MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
+ D ++ + + +V RY NS YVK A +T + LA E+ + RY
Sbjct: 125 EKLTKQQISDRDPKSLRESFLALKELVTRYPNSRYVKDATLRMTYLVDMLANSELHVARY 184
Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
Y+KR Y+A++ R + VL Y D+ EEA+ ++ AY + + D ++ + ++Q YP
Sbjct: 185 YMKRQAYLASVNRCKFVLETYPDSPSVEEALVIMISAYDLMGMDDLKQDTLRVLQTNYPD 244
Query: 260 GYWARY 265
+
Sbjct: 245 SKMLKK 250
>gi|332141866|ref|YP_004427604.1| Competence lipoprotein ComL [Alteromonas macleodii str. 'Deep
ecotype']
gi|327551888|gb|AEA98606.1| Competence lipoprotein ComL [Alteromonas macleodii str. 'Deep
ecotype']
Length = 254
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 51/255 (20%), Positives = 113/255 (44%), Gaps = 14/255 (5%)
Query: 19 LYKFALTIFFSI-AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
+ F L + A+ + G + + +++Y++A ++ NFS A
Sbjct: 1 MKSFRLLAPVLLGAMVSVAGCSSSDKEEKAVL---ANMGAQQLYDRAKQSMEVGNFSAAA 57
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
+ + +PF ++ + L + Y +GK ++ + + +I P +VDY YY+
Sbjct: 58 QTLSALDSRYPFGPLSHQVQLDLIYSYYKSGKNEETLATIDRFIRLNPNHSDVDYAYYMR 117
Query: 138 GMSYA----------QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
G++ I D ++ + R++++Y +S Y A+ + ++
Sbjct: 118 GLTNMESDSNLFQELMNIDRTDRDPSKSRQAFEDFRRLIQQYPDSKYAADAKQRMVHIKD 177
Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
+LA E+ I R+Y++R YVAA R + V+ ++ + ++A+ +V +Y L L +
Sbjct: 178 RLARYEIAIARFYMRRQAYVAAANRGRYVIEHFPNTTQVQQALEIMVSSYEQLGLKELRD 237
Query: 248 EVVSLIQERYPQGYW 262
+ ++ YP +
Sbjct: 238 NAMKTLKLNYPDSEF 252
>gi|253999418|ref|YP_003051481.1| outer membrane assembly lipoprotein YfiO [Methylovorus sp. SIP3-4]
gi|253986097|gb|ACT50954.1| outer membrane assembly lipoprotein YfiO [Methylovorus sp. SIP3-4]
Length = 268
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 58/246 (23%), Positives = 111/246 (45%), Gaps = 11/246 (4%)
Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
IAV +L G + + T + +Y +A ++ +++ KA +YF +P
Sbjct: 7 FIAVLWLSGCAIFGAPTELDE--TKGWSAQRIYTEADEKMRSRDYEKAIKYFETLESRYP 64
Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ----- 143
A ++ + + Y + + +I +P+ N+DY YY+ G++
Sbjct: 65 HGRFATQAQMDKIYAYYKRNDPISTIAAADRFIKLHPDHPNIDYAYYMKGLATFNERGVI 124
Query: 144 ----MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
+ D ++ + + +V RY NS YVK A +T + LA E+ + RY
Sbjct: 125 EKLTKQQISDRDPKSLRESFLALKELVTRYPNSRYVKDATLRMTYLVDMLANSELHVARY 184
Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
Y+KR Y+A++ R + VL Y D+ EEA+ ++ AY + + D ++ + ++Q YP
Sbjct: 185 YMKRQAYLASVNRCKFVLETYPDSPSVEEALVIMISAYDLMGMTDLKQDTLRVLQTNYPD 244
Query: 260 GYWARY 265
+
Sbjct: 245 SKMLKK 250
>gi|221135102|ref|ZP_03561405.1| Competence lipoprotein ComL [Glaciecola sp. HTCC2999]
Length = 252
Score = 102 bits (252), Expect = 6e-20, Method: Composition-based stats.
Identities = 55/253 (21%), Positives = 107/253 (42%), Gaps = 13/253 (5%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
K L I + L G + + +++ + +Y KA ++ NF A E
Sbjct: 1 MKIRLYALSLIGLIALGGCSSAPEKAI---EEVELQGPQAIYAKAKTAMENGNFGGAAEI 57
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
+ +PF ++ + L + Y +G QA + + +I P K++DY Y++ G+
Sbjct: 58 LSDLDSRYPFGELSHQVQLDLIYSYYKSGDSAQALATIDRFIRLNPNHKDIDYAYFMRGL 117
Query: 140 SYAQMIRDVPYDQRAT----------KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
+ +M ++ + ++++ + S Y A+ + + +L
Sbjct: 118 TNMEMDDNLFQSLFNIDRSDRDPSASREAFNDFRQLLDTFPESKYATDAQKRMVYIKTRL 177
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
A E+ I R+Y++R YVAA R Q VL Y D +EA+ +V Y L L
Sbjct: 178 AKYEIAIARFYMRREAYVAAANRGQYVLEYYPDTGMVQEALEIMVSCYDQLGLDQLKANA 237
Query: 250 VSLIQERYPQGYW 262
+ +++ YP+ +
Sbjct: 238 IKILKLNYPESEF 250
>gi|114561851|ref|YP_749364.1| putative lipoprotein [Shewanella frigidimarina NCIMB 400]
gi|114333144|gb|ABI70526.1| putative lipoprotein [Shewanella frigidimarina NCIMB 400]
Length = 253
Score = 102 bits (252), Expect = 7e-20, Method: Composition-based stats.
Identities = 51/253 (20%), Positives = 94/253 (37%), Gaps = 14/253 (5%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+YK A + + D +Y +A ++ N+SKA
Sbjct: 1 MYKIAKGAALVLLSLAITACSSSPEDDDVASKA----SPDVLYSQARTSMELGNYSKAVR 56
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
FPF + L F Y + + ++ P N+DYVYY+ G
Sbjct: 57 SLEALDSRFPFGPHKTQVQLDLIFAYYKMDDAASGLANIDRFLRLNPTHPNIDYVYYMRG 116
Query: 139 MSYAQMIRDVPYDQRATK----------LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
++ Q + +D + R+++ Y NS Y A+ + +N+
Sbjct: 117 LTNMQADNYLFHDLMNIDRTDRDPKNAQDAFKDFDRLIKSYPNSKYSADAQQRMQFLKNR 176
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
LA +++ YY+K + AA R Q V+ + E A+ +V+AY L +
Sbjct: 177 LAKYSIQVAEYYIKMNAWSAAAVRAQSVMEKFPGTPSTERALEIMVKAYGELGQEKLQQN 236
Query: 249 VVSLIQERYPQGY 261
V ++++ +P
Sbjct: 237 VKTVMKANFPTNE 249
>gi|114321698|ref|YP_743381.1| putative lipoprotein [Alkalilimnicola ehrlichii MLHE-1]
gi|114228092|gb|ABI57891.1| putative lipoprotein [Alkalilimnicola ehrlichii MLHE-1]
Length = 254
Score = 102 bits (252), Expect = 8e-20, Method: Composition-based stats.
Identities = 58/233 (24%), Positives = 99/233 (42%), Gaps = 15/233 (6%)
Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
G + E+Y++A L+ N++ A E + FPF A ++
Sbjct: 21 GCSSNGPERQE-----EQATAEELYQQARRQLENGNYTMAVETLERLQGRFPFGPFATQA 75
Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV----------GMSYAQMIR 146
L + Y AG+ + + + ++ YP NV Y Y+ + +
Sbjct: 76 QLDIIYAYYQAGELESTIAAADRFMRLYPRDPNVAYARYMRGLANAGVGDEFFTRVFNLD 135
Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
D + + +++R+ +S YV AR + R+ LA E+ + R+YL+R
Sbjct: 136 RSLRDPQPLRRAFVDFRELIQRHPDSEYVDDARERMQEIRDLLARHEIYVARFYLRRDAP 195
Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
VAA+ R + VL Y E+A+ LVEAY L L D ++V +I E +P
Sbjct: 196 VAAVGRARTVLQEYQGTGAVEDALEVLVEAYGMLELADLQQDVRRVIGENFPG 248
>gi|33592278|ref|NP_879922.1| competence lipoprotein precursor [Bordetella pertussis Tohama I]
gi|33597726|ref|NP_885369.1| competence lipoprotein precursor [Bordetella parapertussis 12822]
gi|33602574|ref|NP_890134.1| competence lipoprotein precursor [Bordetella bronchiseptica RB50]
gi|33571923|emb|CAE41443.1| competence lipoprotein precursor [Bordetella pertussis Tohama I]
gi|33574154|emb|CAE38484.1| competence lipoprotein precursor [Bordetella parapertussis]
gi|33577013|emb|CAE34093.1| competence lipoprotein precursor [Bordetella bronchiseptica RB50]
gi|332381695|gb|AEE66542.1| competence lipoprotein precursor [Bordetella pertussis CS]
Length = 266
Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats.
Identities = 60/246 (24%), Positives = 106/246 (43%), Gaps = 14/246 (5%)
Query: 27 FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86
+ + G S++ T ++Y A + N++ A E
Sbjct: 7 IALSTILIVAGCGSSSTK----YDKTAGWSAEQLYADAKQEVAAGNWTDARERLTAIESR 62
Query: 87 FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV--------- 137
+PF A+++L+ A+V + G+ +QA + + + YP DYV YL
Sbjct: 63 YPFGTYAQQALIELAYVNWKDGENEQALAAIDRFQQLYPNHPGTDYVLYLKGLVNFTPAS 122
Query: 138 -GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196
MS D + + + +V+R+ NS Y A+ +T N +A EV +
Sbjct: 123 AFMSNLTGQDPAERDPKGLRASYDAFNELVQRFPNSKYTPDAQKRMTWLVNAIAMNEVHV 182
Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
RYY +RG YVAA R Q V+ ++ A +EEA+ +VE+Y L + + + ++ +
Sbjct: 183 ARYYYERGAYVAAANRAQTVITDFEGAPASEEALYIMVESYDKLGMTELKGDAERVLDQN 242
Query: 257 YPQGYW 262
YP +
Sbjct: 243 YPNSKF 248
>gi|315122569|ref|YP_004063058.1| outer membrane assembly lipoprotein YfiO [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495971|gb|ADR52570.1| outer membrane assembly lipoprotein YfiO [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 258
Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats.
Identities = 146/255 (57%), Positives = 189/255 (74%), Gaps = 2/255 (0%)
Query: 19 LYKFALTIFFSIAVCFLVGWE--RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76
+Y+F LTIFF + FL + Q S++ S++D +YQR +YEKAV L+ +NF KA
Sbjct: 1 MYRFVLTIFFISTLSFLASCKHQNQPSQNFIFPSISDKKYQRNLYEKAVELLENKNFEKA 60
Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
+ F S++ PF VARK+LLMSAF +Y KY +ASLGEEYI QYP S+++DYVYYL
Sbjct: 61 SKEFYSFSKELPFNDVARKALLMSAFAKYKTKKYLSSASLGEEYIAQYPNSEDIDYVYYL 120
Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196
VGMSYAQ IR+V YDQ T+ M+QYMS I+E+Y SPY KGA+FY+++GRNQLA +E+ +
Sbjct: 121 VGMSYAQKIRNVSYDQHPTQSMVQYMSEILEKYPKSPYSKGAQFYLSIGRNQLAGQEMYV 180
Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
GRYYLK EYV+AI RFQLV+ANY D E EEAMARLVEAY L L+DEA + S+IQ++
Sbjct: 181 GRYYLKNKEYVSAILRFQLVIANYFDTEQVEEAMARLVEAYFMLGLVDEATSMASVIQQK 240
Query: 257 YPQGYWARYVETLVK 271
YP+G W+ YV LV+
Sbjct: 241 YPKGLWSDYVSDLVQ 255
>gi|294669552|ref|ZP_06734619.1| hypothetical protein NEIELOOT_01451 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291308465|gb|EFE49708.1| hypothetical protein NEIELOOT_01451 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 268
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 56/257 (21%), Positives = 109/257 (42%), Gaps = 13/257 (5%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K L + IA L G +T ++Y +A L N+++A +
Sbjct: 1 MKKILLVVALGIA---LGGCAANKGTSDKDAQITQDWPVEKLYAEAQDELNSSNYTRAVK 57
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY------ 132
+ FP A+++ L +A+ Y + ++A + E + +P+ N+DY
Sbjct: 58 LYELLESRFPQGRYAQQAQLDTAYAYYKDEEREKALAAVERFQRLHPQHPNMDYALYLKG 117
Query: 133 ----VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
++ D +A + Q + +V+RY S YV+ A + +
Sbjct: 118 LILFNEDKSFLNKLASQDWSDRDPKANREAYQAFAELVQRYPQSKYVEEASKQMEKLVDA 177
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
LA E+ + RYY KRG ++AA R Q ++ + + EEA+A + +Y + A +
Sbjct: 178 LAGNEISVARYYAKRGAHLAAANRAQNIITGFQNTRFTEEALAIMEVSYRKMNRQQLADD 237
Query: 249 VVSLIQERYPQGYWARY 265
++Q+ +PQ + +
Sbjct: 238 TRRILQQNFPQSPYLQQ 254
>gi|239996650|ref|ZP_04717174.1| Competence lipoprotein ComL [Alteromonas macleodii ATCC 27126]
Length = 254
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 51/255 (20%), Positives = 114/255 (44%), Gaps = 14/255 (5%)
Query: 19 LYKFALTIFFSI-AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
+ F L + A+ + G + + + +++Y++A ++ NFS A
Sbjct: 1 MKSFRLLAPVLLGAMVSVAGCSSSDNEEKAVL---ANMGAQQLYDRAKQSMEVGNFSAAA 57
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
+ + +PF ++ + L + Y +GK ++ + + +I P +VDY YY+
Sbjct: 58 QTLSALDSRYPFGPLSHQVQLDLIYSYYKSGKNEETLATIDRFIRLNPNHSDVDYAYYMR 117
Query: 138 GMSYA----------QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
G++ I D ++ + R++++Y +S Y A+ + ++
Sbjct: 118 GLTNMESDSNLFQELMNIDRTDRDPSKSRAAFEDFRRLIQQYPDSKYAADAKQRMVHIKD 177
Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
+LA E+ I R+Y++R YVAA R + V+ ++ + ++A+ +V +Y L L +
Sbjct: 178 RLARYEIAIARFYMRRQAYVAAANRGRYVIEHFPNTTQVQQALEIMVSSYEQLGLDELRN 237
Query: 248 EVVSLIQERYPQGYW 262
+ ++ YP +
Sbjct: 238 NAMKTLKLNYPDSEF 252
>gi|71282332|ref|YP_270574.1| putative lipoprotein [Colwellia psychrerythraea 34H]
gi|71148072|gb|AAZ28545.1| putative lipoprotein [Colwellia psychrerythraea 34H]
Length = 252
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 52/253 (20%), Positives = 101/253 (39%), Gaps = 14/253 (5%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K + I ++ L G + + + + ++ A L + KA +
Sbjct: 1 MDKLTVKIILTVLALALTGCSSSENDIDKVP----DKSAQSLFVDARTALDNGLYQKAIQ 56
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL-- 136
FPF ++ + L + Y +G Q +L + ++ P + N+DYVYY+
Sbjct: 57 ILGAIDSRFPFGPISHQVQLDLIYAYYKSGDAAQGIALADRFLRLNPNNSNIDYVYYMRA 116
Query: 137 --------VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
I D A++ IV Y +S Y +R + +++
Sbjct: 117 LINISTEENLFQDLAGIDRSDRDPEASRSAFNDFKSIVTDYPDSKYAADSRKRMISIKSR 176
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
LA E+ + +YY+KR Y +A R + V+ +S + E+A+ ++ Y L L D +
Sbjct: 177 LAQYEIAVAKYYVKREAYASAANRARYVVEYFSPSPEIEQALEIMINCYDKLGLADLKKN 236
Query: 249 VVSLIQERYPQGY 261
+ ++ YP
Sbjct: 237 ALQVLAANYPNNK 249
>gi|309378793|emb|CBX22619.1| competence lipoprotein ComL [Neisseria lactamica Y92-1009]
Length = 268
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 55/258 (21%), Positives = 108/258 (41%), Gaps = 13/258 (5%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K L + S+A+C T ++Y +A L N+++A +
Sbjct: 1 MKKILLMVSLSLALC---ACASSQGTVDKDTQTTQGWGVEKLYAEAQDELGGGNYTRAVK 57
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY------ 132
+ FP A+++LL +A+ Y + +A + + + YP+ N+DY
Sbjct: 58 LYEILGSRFPTGRYAQQALLDTAYAYYKDDEKDKALAAIDRFRNLYPQHPNMDYALYLRG 117
Query: 133 ----VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
++ D +A + Q + +V R+ +S Y A + +
Sbjct: 118 LVLFNEDQSFLNKLASQDWSDRDPKANREAYQAFAELVRRFPDSKYAADASARMIKLVDA 177
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
L E+ + RYY+KRG Y+AA R Q ++ +Y + + EE++A L AY L A +
Sbjct: 178 LGGNEMSVARYYMKRGAYIAAANRAQKIIGSYQNTRYVEESLAILELAYQKLGKPQLAAD 237
Query: 249 VVSLIQERYPQGYWARYV 266
+++ +P+ + +
Sbjct: 238 TRRVLETNFPKSPFLTHA 255
>gi|313668817|ref|YP_004049101.1| competence lipoprotein [Neisseria lactamica ST-640]
gi|313006279|emb|CBN87742.1| competence lipoprotein [Neisseria lactamica 020-06]
Length = 268
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 55/258 (21%), Positives = 108/258 (41%), Gaps = 13/258 (5%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K L + S+A+C T ++Y +A L N+++A +
Sbjct: 1 MKKILLMVSLSLALC---ACASSQGTVDKDTQTTQGWGVEKLYAEAQDELGGGNYTRAVK 57
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY------ 132
+ FP A+++LL +A+ Y + +A + + + YP+ N+DY
Sbjct: 58 LYEILGSRFPTGRYAQQALLDTAYAYYKDDEKDKALAAIDRFRNLYPQHPNMDYALYLRG 117
Query: 133 ----VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
++ D +A + Q + +V R+ +S Y A + +
Sbjct: 118 LVLFNEDQSFLNKLASQDWSDRDPKANREAYQAFAELVRRFPDSKYAADASARMIKLVDA 177
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
L E+ + RYY+KRG Y+AA R Q ++ +Y + + EE++A L AY L A +
Sbjct: 178 LGGNEMAVARYYMKRGAYIAAANRAQKIIGSYQNTRYVEESLAILELAYQKLGKPQLAAD 237
Query: 249 VVSLIQERYPQGYWARYV 266
+++ +P+ + +
Sbjct: 238 TRRVLETNFPKSPFLTHA 255
>gi|237809511|ref|YP_002893951.1| outer membrane assembly lipoprotein YfiO [Tolumonas auensis DSM
9187]
gi|237501772|gb|ACQ94365.1| outer membrane assembly lipoprotein YfiO [Tolumonas auensis DSM
9187]
Length = 253
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 55/255 (21%), Positives = 109/255 (42%), Gaps = 16/255 (6%)
Query: 19 LYKFALTI-FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
+ K +++ L G S + D +V +Y++A L ++ +A
Sbjct: 1 MQKVVRFFPVMLLSLSLLAGCSSSSDKPKVPDEPLEV-----LYKQAQSKLHNGDYERAV 55
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
+ +PF A + L + Y QA + + ++ P K+VDYVYY+
Sbjct: 56 DILEALDSRYPFGPYASQVQLQLIYAYYKKEDTAQAIANIDRFLRLNPTHKDVDYVYYMR 115
Query: 138 GMSYAQMIRDVPYD----------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
G++ Q + +D + + + +++ Y +S Y AR +N
Sbjct: 116 GLANMQEDYNFFHDKFGIDRSDRDPQYARQAFKDFQLVLKNYPDSLYASDARARAVYLKN 175
Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
+LA ++ I +Y++R +V+A R + ++ NY D E + A+ +V+AY + L D A+
Sbjct: 176 RLAKFDLAIADFYMRREAWVSAANRAKYLIENYPDTEMTQPALEIMVQAYEKMDLTDLAK 235
Query: 248 EVVSLIQERYPQGYW 262
++ YP +
Sbjct: 236 HARQMLSTNYPDSEY 250
>gi|94501302|ref|ZP_01307823.1| competence lipoprotein ComL, putative [Oceanobacter sp. RED65]
gi|94426573|gb|EAT11560.1| competence lipoprotein ComL, putative [Oceanobacter sp. RED65]
Length = 291
Score = 101 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 59/250 (23%), Positives = 107/250 (42%), Gaps = 16/250 (6%)
Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
+ I + L R +R +Y+KA+ + +NF A E
Sbjct: 18 IMRFLILLITIASLAACSSSGKR------PDQELSERGIYDKAMEAIGNENFFLAIETLE 71
Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG--- 138
+ +PF + ++ L QY A + A + E +I +P+ VDY YY+
Sbjct: 72 RLENRYPFGKYSEQAQLEMIHAQYQAQDLENARATAERFIRLHPQHPKVDYAYYMKALTT 131
Query: 139 -------MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
+ + D + ++ +++R+ NS Y AR + R+++A
Sbjct: 132 YELGLSLVERYFADEESQRDPSPAQESFNELAELIKRFPNSEYAADARQRMIYLRDRIAL 191
Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
E+ + RYYLKR YVAA R + V+ N+ + ++ +A +VEAY L D A + +
Sbjct: 192 HEIHVARYYLKRHAYVAAANRGRNVVENFQGTKQVDDGLAMMVEAYTLLGQKDLADKSLK 251
Query: 252 LIQERYPQGY 261
+++ YP+
Sbjct: 252 VLKANYPEHE 261
>gi|261400384|ref|ZP_05986509.1| competence lipoprotein ComL [Neisseria lactamica ATCC 23970]
gi|269209821|gb|EEZ76276.1| competence lipoprotein ComL [Neisseria lactamica ATCC 23970]
Length = 268
Score = 101 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 55/254 (21%), Positives = 107/254 (42%), Gaps = 13/254 (5%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K L + S+A+C T ++Y +A L N+++A +
Sbjct: 1 MKKILLMVSLSLALC---ACASSQGTVDKDTQTTQGWGVEKLYAEAQDELGGGNYTRAVK 57
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY------ 132
+ FP A+++LL +A+ Y + +A + + + YP+ N+DY
Sbjct: 58 LYEILGSRFPTGRYAQQALLDTAYAYYKDDEKDKALAAIDRFRNLYPQHPNMDYALYLRG 117
Query: 133 ----VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
++ D +A + Q + +V R+ +S Y A + +
Sbjct: 118 LVLFNEDQSFLNKLASQDWSDRDPKANREAYQAFAELVRRFPDSKYAADASARMIKLVDA 177
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
L E+ + RYY+KRG Y+AA R Q ++ +Y + + EE++A L AY L A +
Sbjct: 178 LGGNEMAVARYYMKRGAYIAAANRAQKIIGSYQNTRYVEESLAILELAYQKLGKPQLAAD 237
Query: 249 VVSLIQERYPQGYW 262
+++ +P+ +
Sbjct: 238 TRRVLETNFPKSPF 251
>gi|262369408|ref|ZP_06062736.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
gi|262315476|gb|EEY96515.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
Length = 327
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 62/254 (24%), Positives = 113/254 (44%), Gaps = 17/254 (6%)
Query: 17 YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVY-EKAVLFLKEQNFSK 75
Y++ ALTI + A+ VG ++V T + +VY +KA L+ ++
Sbjct: 6 YKMTMLALTIGIASAM---VGCSSNPKKEVV---DTGPQSSEQVYIQKAEKALQSGQYTD 59
Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
A ++ +P A+++ L +V++ Y+ A +L + +I P+ NVDY YY
Sbjct: 60 AAKHLEALDTYYPTGEYAQQAQLELLYVKFQQKDYEGAIALADRFIRLNPQHPNVDYAYY 119
Query: 136 LVGMSYAQMIRDVPYDQRATKLM----------LQYMSRIVERYTNSPYVKGARFYVTVG 185
+ G++ + D + K Q + RY +S Y A +
Sbjct: 120 VRGVANMEQNYDGLIRYTSLKQAHRDVSYLKVAYQNFVDFIRRYPSSTYAVDAAQRMKFI 179
Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
N+LA E+ R+ +KR +VAA+ R Q V+ +Y + EA+A + +Y L
Sbjct: 180 SNELAESEMNAARFNIKRKAWVAALERAQWVIEHYPQSPQVPEALATVAYSYDQLGDKQT 239
Query: 246 AREVVSLIQERYPQ 259
A++ +++ YP
Sbjct: 240 AQQYTDVLKLNYPN 253
>gi|226941138|ref|YP_002796212.1| ComL [Laribacter hongkongensis HLHK9]
gi|226716065|gb|ACO75203.1| ComL [Laribacter hongkongensis HLHK9]
Length = 263
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 52/253 (20%), Positives = 102/253 (40%), Gaps = 14/253 (5%)
Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
+ +L G S T ++Y +A L N+++A + +
Sbjct: 2 KKIAVMMLMAAWLAGCSTTSE----PADETRGWTVEKLYSEARDELNSGNYTRAIKLYET 57
Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
+P+ A+++ + A+ + + + + + +I +P NVDYVYYL G+
Sbjct: 58 LEARYPYGRYAQQAQMDLAYAHFKDQEPALSLAAADRFIKLHPAHPNVDYVYYLKGLVNY 117
Query: 143 QM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
D +A + +V R+ +S Y AR + + LA
Sbjct: 118 NEDGGILSKYTGQDRAERDPKAAREAFTSFRDLVVRFPDSRYAPDARVKMQNLVDGLAEH 177
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
E+ + RYY++R Y+AA R Q ++ + D+ EE+ A +V AY L + +
Sbjct: 178 ELFVARYYMRRSAYLAAANRAQGMIKEFPDSPFVEESFAIMVTAYDKLGKTTLRDDTRRV 237
Query: 253 IQERYPQGYWARY 265
++ +P + +
Sbjct: 238 LETNFPNSVYLKK 250
>gi|319943654|ref|ZP_08017935.1| competence lipoprotein ComL [Lautropia mirabilis ATCC 51599]
gi|319742887|gb|EFV95293.1| competence lipoprotein ComL [Lautropia mirabilis ATCC 51599]
Length = 359
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 60/249 (24%), Positives = 103/249 (41%), Gaps = 16/249 (6%)
Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85
+ A L G T ++Y A L N++ A + +
Sbjct: 55 LAVVAAGVLLAGCAATDKD------PTTNWTAEQLYADAKADLDAGNWTSAIKGMERLES 108
Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG------- 138
+PF A+++ L A+ Y G +A S + +I +P + +DY YYL G
Sbjct: 109 RYPFGSYAQQAQLDIAWAHYKEGDRAEALSAIDRFIRLHPAHERLDYAYYLKGLVNFSNG 168
Query: 139 ---MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
++ D AT+ ++V R+ S Y + + + N +A+ EV
Sbjct: 169 TGLIARWAGQDASERDLAATREAYDAFQQVVNRFPQSRYREDSIARMRSLVNSMASGEVH 228
Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
+ R+YL RG YVA+ R Q VL++Y E+A+ L +Y L L D + V ++
Sbjct: 229 VARFYLSRGAYVASANRAQGVLSSYQGTPATEDALNILATSYDRLNLPDLRDDTVRVLAR 288
Query: 256 RYPQGYWAR 264
+PQ + +
Sbjct: 289 TWPQSAYLK 297
>gi|126640892|ref|YP_001083876.1| putative competence protein (ComL) [Acinetobacter baumannii ATCC
17978]
Length = 364
Score = 100 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 52/233 (22%), Positives = 98/233 (42%), Gaps = 11/233 (4%)
Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
G S+ +D+ ++ ++KA L + A + +P A+++
Sbjct: 2 GCSSNPSKKEVVDTGPQ-SSEQAYFDKAQKALDRGQYLDATKSLEAIDTYYPTGQYAQQA 60
Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR---------- 146
L + ++ Y+ A +L E +I P+ NVDY YY+ G+S +M
Sbjct: 61 QLELLYSKFKQKDYEGAIALAERFIRLNPQHPNVDYAYYVRGVSNMEMNYDSLLRYTSLQ 120
Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
D K+ Q ++ R+ +S Y A + +LA E+ R+ +KR +
Sbjct: 121 QSHRDVSYLKVAYQNFVDLIRRFPSSQYSVDAAQRMKFIGQELAESEMNAARFNVKRKAW 180
Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
+AA R Q V+ +Y EA+A L +Y L +++ + +++ YP
Sbjct: 181 IAAAERSQWVIEHYPQTPQVPEALATLAYSYDQLGDKATSQQYIEVLKLNYPS 233
>gi|89901093|ref|YP_523564.1| hypothetical protein Rfer_2315 [Rhodoferax ferrireducens T118]
gi|89345830|gb|ABD70033.1| putative transmembrane protein [Rhodoferax ferrireducens T118]
Length = 268
Score = 100 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 67/264 (25%), Positives = 111/264 (42%), Gaps = 20/264 (7%)
Query: 19 LYKFALTIF----FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFS 74
+ + L++ + AV L G T ++Y +A L +
Sbjct: 1 MLRAKLSVVCAWSLAGAVLLLPGCSSTPPDQ------TADWSPNKIYAEAKDELSSGGYD 54
Query: 75 KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
KA F + +A+++ L A+ QY +G+ QA + + ++ +P S +DY
Sbjct: 55 KAVVLFEKLEGRAAGTPLAQQAQLDKAYAQYKSGESAQALATLDRFMKLHPASPALDYAL 114
Query: 135 YLVGMSYAQ----------MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184
YL G+ DQ+A+K + +V R+ S Y AR +T
Sbjct: 115 YLKGIINFNDDLGLFSAVTRQDLAERDQKASKESFESFKELVTRFPESRYTPDARQRMTY 174
Query: 185 GRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244
N LA EV + RYY RG YVAAI R Q+ + +Y EEA+ +V++Y AL L
Sbjct: 175 IVNSLAQYEVHVARYYYGRGAYVAAINRAQVAVTDYQGVPAVEEALFIIVKSYDALGLTQ 234
Query: 245 EAREVVSLIQERYPQGYWARYVET 268
+ ++++ YPQ +
Sbjct: 235 LRDDAKRVLEKNYPQTEYLTRGFK 258
>gi|332970081|gb|EGK09078.1| competence lipoprotein ComL [Kingella kingae ATCC 23330]
Length = 268
Score = 100 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 56/260 (21%), Positives = 98/260 (37%), Gaps = 13/260 (5%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ KF L I L +S +T ++Y +A L + N+++A
Sbjct: 1 MKKFLLVIS---VAAALSACASNASTVSKDAQLTQNWSNDQLYSEARQELNDGNYTRATA 57
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY--- 135
+ +SL+ SA+ + + +A + YP S ++DY Y
Sbjct: 58 LYELLRARQADGRYTEQSLIESAYAHFKNEEPAKALQNLARFEQNYPASVDMDYALYLKG 117
Query: 136 -------LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
+ D A + + ++V RY NS Y + AR + +
Sbjct: 118 LVLFAEDQSFLRRLASQDWSDRDPEANRRAFRVFEQLVNRYPNSKYAEDARKRMAQLVDA 177
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
L E+ I RYY KR Y+AA R Q +L + + + EEA+A +V Y + D A
Sbjct: 178 LGGHEIAIARYYAKRTAYLAANNRAQRILEQFQNTRYVEEALAIMVYTYEQMGNADMAEA 237
Query: 249 VVSLIQERYPQGYWARYVET 268
++ + P + +
Sbjct: 238 TRRVLAQNLPNSPYLQQAWK 257
>gi|325143910|gb|EGC66220.1| competence lipoprotein comL [Neisseria meningitidis M01-240013]
gi|325206454|gb|ADZ01907.1| competence lipoprotein comL [Neisseria meningitidis M04-240196]
Length = 267
Score = 100 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 58/258 (22%), Positives = 112/258 (43%), Gaps = 14/258 (5%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K LT+ +A L + + D +T ++Y +A L N+++A +
Sbjct: 1 MKKILLTVSLGLA---LSACATKGTVDKDA-QITQDWSVEKLYAEAQDELNSSNYTRAVK 56
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY------ 132
+ FP + AR+S L +A+ Y + +A + E + +P+ N+DY
Sbjct: 57 LYEILESRFPTSRHARQSQLDTAYAYYKDDEKDKALAAIERFRRLHPQHPNMDYALYLRG 116
Query: 133 ----VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
++ D +A + Q + +V+R+ NS Y A + +
Sbjct: 117 LVLFNEDQSFLNKLASQDWSDRDPKANREAYQAFAELVQRFPNSKYAADATARMVKLVDA 176
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
L E+ + RYY+KRG Y+AA R Q ++ +Y + + EE++A L AY L A +
Sbjct: 177 LGGNEISVARYYMKRGAYIAAANRAQKIIGSYQNTRYVEESLAILELAYQKLGKPQLAAD 236
Query: 249 VVSLIQERYPQGYWARYV 266
+++ +P+ + +
Sbjct: 237 TRRVLETNFPKSPFLTHA 254
>gi|237748963|ref|ZP_04579443.1| competence lipoprotein ComL [Oxalobacter formigenes OXCC13]
gi|229380325|gb|EEO30416.1| competence lipoprotein ComL [Oxalobacter formigenes OXCC13]
Length = 266
Score = 99.9 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 61/253 (24%), Positives = 106/253 (41%), Gaps = 14/253 (5%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K+ + I + + T ++Y +A L N+ KA E
Sbjct: 1 MRKYLTILLACIIALSISACGLLPEKI----DETASWPAGKLYREAKEELNSGNYEKAVE 56
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
YF + +PF A+++ + A+ Y + QA + E +I +P N+DY+YYL G
Sbjct: 57 YFEKLEARYPFGIYAQQAQMDIAYAYYRQNEQAQALAAAERFIKLHPNHPNIDYMYYLKG 116
Query: 139 MSYAQ----------MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
+ D +A + +V RY +S Y K A +
Sbjct: 117 LINFNDRLGLLNFAFRQDLSERDPKAAQDAFDAFKVLVTRYPDSVYAKDAMLRMKYLVTM 176
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
LA E+ + +YY +RG Y+AA R Q + NY ++ EEA+ + ++Y L L D + +
Sbjct: 177 LAKYEIHVAKYYYRRGAYLAAANRAQRTIKNYPESHVVEEALYIMAQSYKKLGLYDLSAD 236
Query: 249 VVSLIQERYPQGY 261
+ ++ YP
Sbjct: 237 AERVFKQNYPDSK 249
>gi|119775738|ref|YP_928478.1| putative lipoprotein [Shewanella amazonensis SB2B]
gi|119768238|gb|ABM00809.1| putative lipoprotein [Shewanella amazonensis SB2B]
Length = 283
Score = 99.9 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 55/256 (21%), Positives = 103/256 (40%), Gaps = 13/256 (5%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+YKFA ++ L S++ + S + +Y +A ++ NFSKA +
Sbjct: 30 MYKFAKGSAVALFALALGACSSSGSQEDLVLS---QKSPEALYAQARTSMELGNFSKAVK 86
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
FPF + L + Y QA + + ++ P +VDYV Y+ G
Sbjct: 87 SLEALDSRFPFGAHKTQVQLDMIYAYYKLDDTPQAIANIDRFLRLNPTHPDVDYVQYMRG 146
Query: 139 MSYAQMIRDVPYDQRATK----------LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
+ Q + +D + R+++ Y NS Y A + +N+
Sbjct: 147 LVNMQADSYLFHDMMNIDRTDRDPKNAMDAFKDFERLIKTYPNSKYAADAHQRMQFLKNR 206
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
LA +++ YY+K + AA R Q V+ ++ E A+ + ++Y L +
Sbjct: 207 LARYSIQVAEYYVKMNAWSAAAVRAQTVMESFPGTPSTERALEIMAQSYDELGQEQLKKH 266
Query: 249 VVSLIQERYPQGYWAR 264
V+ ++QE +P +
Sbjct: 267 VLMVMQENFPANEMLQ 282
>gi|145297341|ref|YP_001140182.1| ComL family lipoprotein [Aeromonas salmonicida subsp. salmonicida
A449]
gi|142850113|gb|ABO88434.1| lipoprotein, ComL family [Aeromonas salmonicida subsp. salmonicida
A449]
Length = 257
Score = 99.9 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 56/252 (22%), Positives = 101/252 (40%), Gaps = 17/252 (6%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
K L + ++ + G + +Y+KA L L N+ A E
Sbjct: 9 KKSHLLMSLALVATLITGCSSTKPK-------VPDEPPETLYQKARLKLDAGNYVNAIEL 61
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
+PF + + L + Y QA + + +I P KN+DYV+Y+ G+
Sbjct: 62 LEALDSRYPFGAYSNQVQLDLIYAYYKQDDTAQAIANIDRFIRLNPAHKNIDYVFYMRGL 121
Query: 140 SYAQMIRDVPYD----------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
+ + D + Q +++ Y NS Y AR + +N+L
Sbjct: 122 TNMAGDYNFFQDFLGINRDDKDPSYARQAFQDFKTLLQNYPNSVYAADARARMIGLKNRL 181
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
A ++ + YY+KR +AA R +L++ Y D E+A+ +VE+Y L + A+
Sbjct: 182 ARYDLSVAEYYVKRDALIAAANRAKLIVETYPDTAETEKALEIMVESYDTLKMPTLAQHA 241
Query: 250 VSLIQERYPQGY 261
++ + YP
Sbjct: 242 REVLAKNYPDNR 253
>gi|311104862|ref|YP_003977715.1| competence lipoprotein ComL [Achromobacter xylosoxidans A8]
gi|310759551|gb|ADP15000.1| competence lipoprotein ComL [Achromobacter xylosoxidans A8]
Length = 280
Score = 99.9 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 57/250 (22%), Positives = 99/250 (39%), Gaps = 14/250 (5%)
Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
+ AV + G +S+ T ++Y A + + +A E
Sbjct: 19 LRVVIALFAVMVIAGCGSTNSK----YDKTTNWSAEQLYADAKAEMSSGGWKEARERLTA 74
Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
+PF A+++LL A+V + G+ +QA + + + YP DY YL G+
Sbjct: 75 IESRYPFGVYAQQALLELAYVNWKDGENEQALAAIDRFQQLYPNHPGTDYALYLKGLINF 134
Query: 143 QMIRDVPYDQRATKLM----------LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
+ +++RY +S Y A V N +A
Sbjct: 135 TPASAFMSSITGQDPAERDPKGLRASYDAFNELIKRYPDSKYTVDAEKRVAWLVNTIAMN 194
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
EV + RYY +RG YVAA R Q V+ ++ A EEA+ +VE+Y L + + + +
Sbjct: 195 EVHVARYYYERGAYVAAANRAQTVITDFEGAPATEEALYLMVESYDKLGMTELKNDSQRV 254
Query: 253 IQERYPQGYW 262
+ +P +
Sbjct: 255 YDKNFPNSEF 264
>gi|226953431|ref|ZP_03823895.1| DNA uptake lipoprotein-like protein [Acinetobacter sp. ATCC 27244]
gi|294649579|ref|ZP_06726998.1| competence protein [Acinetobacter haemolyticus ATCC 19194]
gi|226835814|gb|EEH68197.1| DNA uptake lipoprotein-like protein [Acinetobacter sp. ATCC 27244]
gi|292824518|gb|EFF83302.1| competence protein [Acinetobacter haemolyticus ATCC 19194]
Length = 329
Score = 99.9 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 52/250 (20%), Positives = 101/250 (40%), Gaps = 11/250 (4%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
YK + VG S+ +D ++ +EKA+ L+ ++ A +
Sbjct: 6 YKITVLALSLGVASAFVGCSSNPSKKEVVDKGPQ-SSEQVYFEKALKSLERNQYTDAVKS 64
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
FP +++ L + ++ Y+ +L + +I P+ NVDY YY+ G+
Sbjct: 65 LEALDTYFPTGQYTQQAQLELLYAKFKQKDYEGTIALADRFIRLNPQHPNVDYAYYVRGV 124
Query: 140 SYAQMIRDVPYDQRATKLM----------LQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
+ +M D + K Q ++ R+ +S Y A + +L
Sbjct: 125 ANMEMNYDSLIRYTSLKQAHRDVSYIKVAYQNFVDLIRRFPSSQYSVDAAQRMKYIGQEL 184
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
A E+ R+ ++R ++AA R + VL Y EA+A L +Y L +++
Sbjct: 185 AESEMNAARFNIQRKAWLAAAERARWVLEYYPQTPQTPEALATLAYSYQQLGDKATSQQY 244
Query: 250 VSLIQERYPQ 259
+ +++ YP
Sbjct: 245 IEILKLNYPN 254
>gi|300114964|ref|YP_003761539.1| outer membrane assembly lipoprotein YfiO [Nitrosococcus watsonii
C-113]
gi|299540901|gb|ADJ29218.1| outer membrane assembly lipoprotein YfiO [Nitrosococcus watsonii
C-113]
Length = 262
Score = 99.9 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 54/259 (20%), Positives = 108/259 (41%), Gaps = 11/259 (4%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
+ + +L G + + Y +A L ++ KA ++
Sbjct: 1 MWIFKFLSLCLILWLGGCAWLG-KSPPEEKPEADWTVERFYAEAKAALNAGDYQKAITFY 59
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
Q +PF A+++LL SA+ Y + + A + + +I YP + ++DY +YL G+
Sbjct: 60 EQLEARYPFGVYAQQALLESAYAYYKFNEPESALAALDRFIRLYPLNSHMDYAHYLKGLV 119
Query: 141 YAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
+ D + + L+ +++R+ +S Y + + + RN+LA
Sbjct: 120 SFHRGVGIVERYIPRDETQRDPESARNALKSFKTLIQRFPDSKYAEDSAQRIVYLRNRLA 179
Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
E+ + YY++RG Y+ AI R + V+ NY EA+ + Y L L + + +
Sbjct: 180 QHEINVAHYYMRRGAYIGAINRAKYVVENYQRTPPVPEALTIMARGYEILGLNELKEDTL 239
Query: 251 SLIQERYPQGYWARYVETL 269
+++ +P TL
Sbjct: 240 RILELSFPGHSGIAKARTL 258
>gi|17546346|ref|NP_519748.1| hypothetical protein RSc1627 [Ralstonia solanacearum GMI1000]
gi|17428643|emb|CAD15329.1| probable dna uptake lipoprotein transmembrane [Ralstonia
solanacearum GMI1000]
Length = 289
Score = 99.9 bits (246), Expect = 4e-19, Method: Composition-based stats.
Identities = 56/249 (22%), Positives = 104/249 (41%), Gaps = 14/249 (5%)
Query: 30 IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89
+A + + T ++Y +A L ++SKA +Y+ + +PF
Sbjct: 35 VACLAISACGIMPEQQ----DETAGWSANKLYSEAKDALDGGDYSKAVKYYEKLESRYPF 90
Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
A+++ + +A+ Y G+ A + + +I +P +VDY YYL G+
Sbjct: 91 GPFAQQAQIETAYANYKDGETAAALAAVDRFIQLHPNHPSVDYAYYLKGLINFNDNLGWL 150
Query: 150 YDQRAT----------KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
+ ++ R+ NS Y A + N +A EV+ RY
Sbjct: 151 GRFSNQDLSERDPKAARAAYDAFKTLITRFPNSKYAPDAAQRMQYIVNAMAEHEVQAARY 210
Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
Y +RG Y+AA R Q + +Y A EE + ++++Y AL + D + +I++ YP
Sbjct: 211 YYRRGAYLAATNRAQEAIKDYDRAPAVEEGLYIMMKSYEALGMKDLRDDTERIIKQNYPN 270
Query: 260 GYWARYVET 268
+ Y +
Sbjct: 271 SDFLLYGQR 279
>gi|327482284|gb|AEA85594.1| competence protein ComL [Pseudomonas stutzeri DSM 4166]
Length = 329
Score = 99.9 bits (246), Expect = 4e-19, Method: Composition-based stats.
Identities = 62/244 (25%), Positives = 101/244 (41%), Gaps = 17/244 (6%)
Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85
+ ++V + + E+Y++A L ++++ A
Sbjct: 6 LLLIAIFALTAACSSN-------ETVDENLGEVELYQQAQADLDNKSYTSAISKLKALES 58
Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
+PF A ++ L + Y + + A S E +I +P+ NVDY YYL G++
Sbjct: 59 RYPFGRFAEQAQLELIYAYYRNAEPEAARSAAERFIRLHPQHPNVDYAYYLKGLASFDQD 118
Query: 146 R----------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
R D A + +++ RY NS Y A+ + RN LAA E+
Sbjct: 119 RGLLARFLPLDMTKRDPGAARDSFNEFAQLTSRYPNSRYSPDAKARMIYLRNLLAANEIH 178
Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
+ YYLKR YVAA R + V+ N+ + +A + EAY L L D A + +Q
Sbjct: 179 VAHYYLKRQAYVAAANRGRYVVENFQGTPAVADGLAVMTEAYQRLGLDDLADASLKTLQL 238
Query: 256 RYPQ 259
YP
Sbjct: 239 NYPD 242
Score = 36.7 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 18/76 (23%), Positives = 29/76 (38%)
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+ + L Y +AI + + + + Y AE+A L+ AY A + AR
Sbjct: 34 YQQAQADLDNKSYTSAISKLKALESRYPFGRFAEQAQLELIYAYYRNAEPEAARSAAERF 93
Query: 254 QERYPQGYWARYVETL 269
+PQ Y L
Sbjct: 94 IRLHPQHPNVDYAYYL 109
>gi|294788952|ref|ZP_06754192.1| competence lipoprotein ComL [Simonsiella muelleri ATCC 29453]
gi|294483054|gb|EFG30741.1| competence lipoprotein ComL [Simonsiella muelleri ATCC 29453]
Length = 268
Score = 99.5 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 58/257 (22%), Positives = 104/257 (40%), Gaps = 13/257 (5%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ KF +F + V L G S+ +T ++Y +A L N+++A +
Sbjct: 1 MKKF---LFSVVVVAALSGCAANQSKISKDAQITQNWTADQLYSEARNELNSGNYTRATK 57
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY--- 135
+ P +SLL +A+ QY + ++A + YP S+++DY Y
Sbjct: 58 LYELLRARQPEGRYIEQSLLDTAYAQYKNEEPEKALIALARFKQNYPASRDMDYALYLKG 117
Query: 136 -------LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
+ D + + +V++Y S Y A + +
Sbjct: 118 LVLFAEEQSFLRKLASQDWADRDPASNRKAYYAFEELVKKYPTSKYAADATKRMAKLVDA 177
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
L E+ I RYY KRG YVAA R Q V+ N+ + EE++A ++ Y + A +
Sbjct: 178 LGGHEIAIARYYAKRGAYVAANNRAQRVIENFQNTRFVEESLAIMIFTYKKMDKPRLAED 237
Query: 249 VVSLIQERYPQGYWARY 265
V ++Q +P + +
Sbjct: 238 VRQVLQHNFPNSPYLQK 254
>gi|161869645|ref|YP_001598811.1| competence lipoprotein [Neisseria meningitidis 053442]
gi|161595198|gb|ABX72858.1| competence lipoprotein [Neisseria meningitidis 053442]
gi|325127791|gb|EGC50699.1| competence lipoprotein comL [Neisseria meningitidis N1568]
gi|325133783|gb|EGC56439.1| competence lipoprotein comL [Neisseria meningitidis M13399]
gi|325203790|gb|ADY99243.1| competence lipoprotein comL [Neisseria meningitidis M01-240355]
Length = 267
Score = 99.5 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 59/258 (22%), Positives = 112/258 (43%), Gaps = 14/258 (5%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K LT+ +A L Q + D +T ++Y +A L N+++A +
Sbjct: 1 MKKILLTVSLGLA---LSACATQGTVDKDA-QITQDWSVEKLYAEAQDELNSSNYTRAVK 56
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY------ 132
+ FP + AR+S L +A+ Y + +A + E + +P+ N+DY
Sbjct: 57 LYEILESRFPTSRHARQSQLDTAYAYYKDDEKDKALAAIERFRRLHPQHPNMDYALYLRG 116
Query: 133 ----VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
++ D +A + Q + +V+R+ NS Y A + +
Sbjct: 117 LVLFNEDQSFLNKLASQDWSDRDPKANREAYQAFAELVQRFPNSKYAADATARMVKLVDA 176
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
L E+ + RYY+KRG Y+AA R Q ++ +Y + + EE++A L AY L A +
Sbjct: 177 LGGNEISVARYYMKRGAYIAAANRAQKIIGSYQNTRYVEESLAILELAYQKLGKPQLAAD 236
Query: 249 VVSLIQERYPQGYWARYV 266
+++ +P+ + +
Sbjct: 237 TRRVLETNFPKSPFLTHA 254
>gi|304387999|ref|ZP_07370171.1| competence lipoprotein ComL [Neisseria meningitidis ATCC 13091]
gi|304337998|gb|EFM04136.1| competence lipoprotein ComL [Neisseria meningitidis ATCC 13091]
Length = 267
Score = 99.5 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 59/258 (22%), Positives = 112/258 (43%), Gaps = 14/258 (5%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K LT+ +A L Q + D +T ++Y +A L N+++A +
Sbjct: 1 MKKILLTVSLGLA---LSACATQGTVDKDA-QITQDWSVEKLYAEAQDELNSSNYTRAVK 56
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY------ 132
+ FP + AR+S L +A+ Y + +A + E + +P+ N+DY
Sbjct: 57 LYEILESRFPTSRHARQSQLDTAYAYYKDDEKDKALAAIERFRRLHPQHPNMDYALYLRG 116
Query: 133 ----VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
++ D +A + Q + +V+R+ NS Y A + +
Sbjct: 117 LVLFNEDQSFLNKLASQDWSDRDPKANREAYQAFAELVQRFPNSKYAADATARMIKLVDA 176
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
L E+ + RYY+KRG Y+AA R Q ++ +Y + + EE++A L AY L A +
Sbjct: 177 LGGNEMSVARYYMKRGAYIAATNRAQKIIGSYQNTRYVEESLAILELAYQKLGKPQLAAD 236
Query: 249 VVSLIQERYPQGYWARYV 266
+++ +P+ + +
Sbjct: 237 TRRVLETNFPKSPFLTHA 254
>gi|157376632|ref|YP_001475232.1| putative lipoprotein [Shewanella sediminis HAW-EB3]
gi|157319006|gb|ABV38104.1| putative lipoprotein [Shewanella sediminis HAW-EB3]
Length = 282
Score = 99.5 bits (245), Expect = 5e-19, Method: Composition-based stats.
Identities = 53/256 (20%), Positives = 92/256 (35%), Gaps = 14/256 (5%)
Query: 17 YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76
++KFA + + D+ + +Y +A ++ NFSKA
Sbjct: 28 LSMHKFAKGAVVGLFSLAIAACSSSPEEDLKVKK----SSPDILYSQARTSMELGNFSKA 83
Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
+PF + L F Y + + +I P K++DYVYY+
Sbjct: 84 VRSLEALDSRYPFGPHKTQVQLDLIFAYYKLDDAASGIANIDRFIRLNPTHKDIDYVYYM 143
Query: 137 VGMSYAQMIRDVPYDQRATK----------LMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
G+ Q + +D R+++ Y S Y A + +
Sbjct: 144 RGLVNMQSDNYMFHDMLDIDRTDRDPKVAQDAFNDFDRLIKSYPKSKYAPDAAKRMLYLK 203
Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
N+LA + + YY+K + AA R Q V+ Y E A+ + EAY L
Sbjct: 204 NRLAKYSINVAEYYIKMNAWSAASTRAQSVMETYPGTTSTERALEIMAEAYGELGQEKLR 263
Query: 247 REVVSLIQERYPQGYW 262
V+S+++ +P
Sbjct: 264 ENVLSVMKINFPNNKM 279
>gi|121634500|ref|YP_974745.1| competence lipoprotein [Neisseria meningitidis FAM18]
gi|218767825|ref|YP_002342337.1| competence lipoprotein [Neisseria meningitidis Z2491]
gi|254804586|ref|YP_003082807.1| DNA uptake lipoprotein [Neisseria meningitidis alpha14]
gi|18203141|sp|Q9JVB7|COML_NEIMA RecName: Full=Competence lipoprotein ComL; Flags: Precursor
gi|120866206|emb|CAM09946.1| competence lipoprotein [Neisseria meningitidis FAM18]
gi|121051833|emb|CAM08139.1| competence lipoprotein [Neisseria meningitidis Z2491]
gi|254668129|emb|CBA04725.1| DNA uptake lipoprotein [Neisseria meningitidis alpha14]
gi|254670507|emb|CBA06261.1| competence lipoprotein ComL [Neisseria meningitidis alpha153]
gi|261392925|emb|CAX50510.1| competence lipoprotein ComL [Neisseria meningitidis 8013]
gi|308388891|gb|ADO31211.1| competence lipoprotein [Neisseria meningitidis alpha710]
gi|319410075|emb|CBY90409.1| competence lipoprotein ComL [Neisseria meningitidis WUE 2594]
gi|325131844|gb|EGC54544.1| competence lipoprotein comL [Neisseria meningitidis M6190]
gi|325136075|gb|EGC58685.1| competence lipoprotein comL [Neisseria meningitidis M0579]
gi|325137894|gb|EGC60469.1| competence lipoprotein comL [Neisseria meningitidis ES14902]
gi|325139919|gb|EGC62449.1| competence lipoprotein comL [Neisseria meningitidis CU385]
gi|325141925|gb|EGC64365.1| competence lipoprotein comL [Neisseria meningitidis 961-5945]
gi|325197922|gb|ADY93378.1| competence lipoprotein comL [Neisseria meningitidis G2136]
gi|325202502|gb|ADY97956.1| competence lipoprotein comL [Neisseria meningitidis M01-240149]
gi|325207747|gb|ADZ03199.1| competence lipoprotein comL [Neisseria meningitidis NZ-05/33]
Length = 267
Score = 99.5 bits (245), Expect = 5e-19, Method: Composition-based stats.
Identities = 59/258 (22%), Positives = 112/258 (43%), Gaps = 14/258 (5%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K LT+ +A L Q + D +T ++Y +A L N+++A +
Sbjct: 1 MKKILLTVSLGLA---LSACATQGTVDKDA-QITQDWSVEKLYAEAQDELNSSNYTRAVK 56
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY------ 132
+ FP + AR+S L +A+ Y + +A + E + +P+ N+DY
Sbjct: 57 LYEILESRFPTSRHARQSQLDTAYAYYKDDEKDKALAAIERFRRLHPQHPNMDYALYLRG 116
Query: 133 ----VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
++ D +A + Q + +V+R+ NS Y A + +
Sbjct: 117 LVLFNEDQSFLNKLASQDWSDRDPKANREAYQAFAELVQRFPNSKYAADATARMVKLVDA 176
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
L E+ + RYY+KRG Y+AA R Q ++ +Y + + EE++A L AY L A +
Sbjct: 177 LGGNEMSVARYYMKRGAYIAAANRAQKIIGSYQNTRYVEESLAILELAYQKLGKPQLAAD 236
Query: 249 VVSLIQERYPQGYWARYV 266
+++ +P+ + +
Sbjct: 237 TRRVLETNFPKSPFLTHA 254
>gi|329902612|ref|ZP_08273173.1| putative component of the lipoprotein assembly complex (forms a
complex with YaeT, YfgL, and NlpB) [Oxalobacteraceae
bacterium IMCC9480]
gi|327548720|gb|EGF33363.1| putative component of the lipoprotein assembly complex (forms a
complex with YaeT, YfgL, and NlpB) [Oxalobacteraceae
bacterium IMCC9480]
Length = 265
Score = 99.5 bits (245), Expect = 5e-19, Method: Composition-based stats.
Identities = 57/256 (22%), Positives = 103/256 (40%), Gaps = 14/256 (5%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ L V + + T ++Y +A + N+ +
Sbjct: 1 MRNKLLKCAALALVFTISACGLLPEKI----DETKNWSAAKLYAEARDEISTGNYETGIK 56
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
Y+ + +PF A+++ + A+ Y QA + E +I +P NVDY+YYL G
Sbjct: 57 YYERLESRYPFGTFAQQAQMEVAYAYYRQSDQAQALAAVERFIKLHPNHPNVDYMYYLRG 116
Query: 139 ----------MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
+ D +A + ++VER+ +S Y AR + N
Sbjct: 117 LINFNDKLGLFDFVSRQDATERDPKAAHEAFESFKQLVERFPDSIYAADARLRMKYLVNA 176
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
+A EV + YY +RG YVAA+ R Q + Y A EEA+ + +Y L + + +
Sbjct: 177 IAQHEVHVANYYFRRGAYVAAVNRAQFAVKEYPTAPATEEALFVMTRSYDELGMPELRDD 236
Query: 249 VVSLIQERYPQGYWAR 264
++++ +P + R
Sbjct: 237 AGRVMKQNFPNSVYYR 252
>gi|83745882|ref|ZP_00942939.1| transmembrane protein [Ralstonia solanacearum UW551]
gi|83727572|gb|EAP74693.1| transmembrane protein [Ralstonia solanacearum UW551]
Length = 289
Score = 99.5 bits (245), Expect = 5e-19, Method: Composition-based stats.
Identities = 57/249 (22%), Positives = 105/249 (42%), Gaps = 14/249 (5%)
Query: 30 IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89
+A + + T ++Y +A L ++SKA +Y+ + +PF
Sbjct: 35 VACLAISACGIMPEQQ----DETAGWSANKLYSEAKDALDGGDYSKAVKYYEKLESRYPF 90
Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
A+++ + +A+ Y G+ A + + +I +P +VDY YYL G+
Sbjct: 91 GPFAQQAQIETAYANYKDGETAAALAAVDRFIQLHPNHPSVDYAYYLKGLINFNDNLGWL 150
Query: 150 YDQRAT----------KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
+ ++ R+ NS Y A + N +A EV+ RY
Sbjct: 151 GRFSNQDLSERDPKAARAAYDAFKTLITRFPNSKYTPDAAQRMQYIVNAMAEHEVQAARY 210
Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
Y +RG Y+AA R Q + +Y A EEA+ ++++Y AL + D + +I++ YP
Sbjct: 211 YYRRGAYLAATNRAQEAIKDYDRAPAVEEALYIMMKSYEALGMKDLRDDTERIIKQNYPN 270
Query: 260 GYWARYVET 268
+ Y +
Sbjct: 271 SNFMLYGQR 279
>gi|253996249|ref|YP_003048313.1| outer membrane assembly lipoprotein YfiO [Methylotenera mobilis
JLW8]
gi|253982928|gb|ACT47786.1| outer membrane assembly lipoprotein YfiO [Methylotenera mobilis
JLW8]
Length = 267
Score = 99.1 bits (244), Expect = 6e-19, Method: Composition-based stats.
Identities = 61/244 (25%), Positives = 103/244 (42%), Gaps = 11/244 (4%)
Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85
I L G + D T +Y++ ++++++ KA YF +
Sbjct: 4 ISILAFTFLLSGCAIFGAPTEIDD--TKGWTAERIYQEGAAKMQDRDYDKAIVYFQKLES 61
Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY---------L 136
+P A ++ L +A+ Y A + + +I +P+ NVDY YY
Sbjct: 62 RYPHGKYATQAQLETAYAHYKKQDPVSAVAAADRFIKLHPDHPNVDYAYYLKGLAVFNER 121
Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196
+ + D RA K +V RY S YVK A + N L+ E+ +
Sbjct: 122 GIIEKLTKQQVSDRDPRALKDSFATFKELVTRYPKSRYVKDATQRMVYLANSLSEHELHV 181
Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
RYY+KR YVAAI R + V+ Y + H EEA+ ++ AY + + D + + +++
Sbjct: 182 ARYYMKRKAYVAAINRTKYVIEYYPQSPHVEEALVIMISAYDLMGMDDLKNDTLRVLKTN 241
Query: 257 YPQG 260
YP
Sbjct: 242 YPDS 245
>gi|89093552|ref|ZP_01166500.1| competence lipoprotein ComL, putative [Oceanospirillum sp. MED92]
gi|89082242|gb|EAR61466.1| competence lipoprotein ComL, putative [Oceanospirillum sp. MED92]
Length = 307
Score = 99.1 bits (244), Expect = 6e-19, Method: Composition-based stats.
Identities = 54/254 (21%), Positives = 108/254 (42%), Gaps = 15/254 (5%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
+ ++ ++ Y D ++++Y++A+ ++E N+ A E
Sbjct: 1 MRITKSLIVALFCLMTAACSWFEDLQEYPD-----VPEQQLYQEAMKAMEEVNYDLAIEK 55
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
+PF + ++ L + + + + A + + +I +P N+DY YYL G+
Sbjct: 56 LQLLEARYPFGRFSEQTQLELIYAYFKNYEPEAARAAADRFIRLHPNHDNIDYAYYLKGL 115
Query: 140 SYAQMIRDVPYDQRATKL----------MLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
+ + + S +V RY S Y + + +N+L
Sbjct: 116 TAFEQDISWITQYLPIDETQRDPGAALDSFESFSTLVNRYPESQYAPDSYKRMVYLKNRL 175
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
AA EV + RYY++R +VAA R + V+ N + +A+A ++EAY L D A +
Sbjct: 176 AAYEVHVARYYIQREAFVAAANRGRYVIENMQETPAVPDALAVMIEAYTHLGQQDLAADT 235
Query: 250 VSLIQERYPQGYWA 263
S++ + YP+ +
Sbjct: 236 QSVLSQNYPEYQYT 249
>gi|207743016|ref|YP_002259408.1| dna uptake lipoprotein [Ralstonia solanacearum IPO1609]
gi|206594413|emb|CAQ61340.1| dna uptake lipoprotein [Ralstonia solanacearum IPO1609]
Length = 277
Score = 98.7 bits (243), Expect = 7e-19, Method: Composition-based stats.
Identities = 57/249 (22%), Positives = 105/249 (42%), Gaps = 14/249 (5%)
Query: 30 IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89
+A + + T ++Y +A L ++SKA +Y+ + +PF
Sbjct: 23 VACLAISACGIMPEQQ----DETAGWSANKLYSEAKDALDGGDYSKAVKYYEKLESRYPF 78
Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
A+++ + +A+ Y G+ A + + +I +P +VDY YYL G+
Sbjct: 79 GPFAQQAQIETAYANYKDGETAAALAAVDRFIQLHPNHPSVDYAYYLKGLINFNDNLGWL 138
Query: 150 YDQRAT----------KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
+ ++ R+ NS Y A + N +A EV+ RY
Sbjct: 139 GRFSNQDLSERDPKAARAAYDAFKTLITRFPNSKYTPDAAQRMQYIVNAMAEHEVQAARY 198
Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
Y +RG Y+AA R Q + +Y A EEA+ ++++Y AL + D + +I++ YP
Sbjct: 199 YYRRGAYLAATNRAQEAIKDYDRAPAVEEALYIMMKSYEALGMKDLRDDTERIIKQNYPN 258
Query: 260 GYWARYVET 268
+ Y +
Sbjct: 259 SNFMLYGQR 267
>gi|300703939|ref|YP_003745541.1| lipoprotein [Ralstonia solanacearum CFBP2957]
gi|299071602|emb|CBJ42926.1| putative lipoprotein, ComL family, tetratricopeptide repeats (TPR)
domain [Ralstonia solanacearum CFBP2957]
Length = 277
Score = 98.7 bits (243), Expect = 7e-19, Method: Composition-based stats.
Identities = 56/243 (23%), Positives = 103/243 (42%), Gaps = 14/243 (5%)
Query: 30 IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89
+A + + T ++Y +A L ++SKA +Y+ + +PF
Sbjct: 23 VACLAISACGIMPEQQ----DETAGWSANKLYSEAKDALDGGDYSKAVKYYEKLESRYPF 78
Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
A+++ + +A+ Y G+ A + + +I +P +VDY YYL G+
Sbjct: 79 GPFAQQAQIETAYANYKDGETAAALAAVDRFIQLHPNHPSVDYAYYLKGLINFNDNLGWL 138
Query: 150 YDQRAT----------KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
+ ++ R+ NS Y A + N +A EV+ RY
Sbjct: 139 GRFSNQDLSERDPKAARAAYDAFKTLITRFPNSKYTPDAAQRMQYIVNAMAEHEVQAARY 198
Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
Y +RG Y+AA R Q + +Y A EEA+ ++++Y AL + D + +I++ YP
Sbjct: 199 YYRRGAYLAATNRAQEAIKDYDRAPAVEEALYIMMKSYEALGMKDLRDDTERIIKQNYPN 258
Query: 260 GYW 262
+
Sbjct: 259 SNF 261
>gi|254673629|emb|CBA09175.1| competence lipoprotein ComL [Neisseria meningitidis alpha275]
Length = 267
Score = 98.7 bits (243), Expect = 8e-19, Method: Composition-based stats.
Identities = 59/258 (22%), Positives = 112/258 (43%), Gaps = 14/258 (5%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K LT+ +A L Q + D +T ++Y +A L N+++A +
Sbjct: 1 MKKILLTVSLGLA---LSACATQGTVDKDA-QITQDWSVEKLYAEAQDELNSSNYTRAVK 56
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY------ 132
+ FP + AR+S L +A+ Y + +A + E + +P+ N+DY
Sbjct: 57 LYEILESRFPTSLHARQSQLDTAYAYYKDDEKDKALAAIERFRRLHPQHPNMDYALYLRG 116
Query: 133 ----VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
++ D +A + Q + +V+R+ NS Y A + +
Sbjct: 117 LVLFNEDQSFLNKLASQDWSDRDPKANREAYQAFAELVQRFPNSKYAADATVRMVKLVDA 176
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
L E+ + RYY+KRG Y+AA R Q ++ +Y + + EE++A L AY L A +
Sbjct: 177 LGGNEMSVARYYMKRGAYIAAANRAQKIIGSYQNTRYVEESLAILELAYQKLGKPQLAAD 236
Query: 249 VVSLIQERYPQGYWARYV 266
+++ +P+ + +
Sbjct: 237 TRRVLETNFPKSPFLTHA 254
>gi|300691370|ref|YP_003752365.1| lipoprotein, ComL family, tetratricopeptide repeats (TPR) domain
[Ralstonia solanacearum PSI07]
gi|299078430|emb|CBJ51082.1| putative lipoprotein, ComL family, tetratricopeptide repeats (TPR)
domain [Ralstonia solanacearum PSI07]
Length = 277
Score = 98.7 bits (243), Expect = 8e-19, Method: Composition-based stats.
Identities = 56/242 (23%), Positives = 102/242 (42%), Gaps = 14/242 (5%)
Query: 30 IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89
+A + + T ++Y +A L ++SKA +Y+ + +PF
Sbjct: 23 VACLAISACGIMPEQQ----DETAGWSANKLYSEAKDALDGGDYSKAVKYYEKLESRYPF 78
Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
A+++ + +A+ Y G+ A + + +I +P +VDY YYL G+
Sbjct: 79 GPFAQQAQIETAYANYKDGETAAALAAVDRFIQLHPNHPSVDYAYYLKGLINFNDNLGWL 138
Query: 150 YDQRAT----------KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
+ ++ R+ NS Y A + N +A EV+ RY
Sbjct: 139 GRFSNQDLSERDPKAARAAYDAFKTLITRFPNSKYTPDAAQRMQYIVNAMADHEVQAARY 198
Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
Y +RG Y+AA R Q + +Y A EEA+ ++++Y AL + D + +I++ YP
Sbjct: 199 YYRRGAYLAATNRAQEAIKDYDRAPAVEEALYIMMKSYEALGMKDLHDDTERIIKQNYPN 258
Query: 260 GY 261
Sbjct: 259 SD 260
>gi|293604135|ref|ZP_06686543.1| competence lipoprotein ComL [Achromobacter piechaudii ATCC 43553]
gi|292817360|gb|EFF76433.1| competence lipoprotein ComL [Achromobacter piechaudii ATCC 43553]
Length = 262
Score = 98.7 bits (243), Expect = 8e-19, Method: Composition-based stats.
Identities = 57/250 (22%), Positives = 99/250 (39%), Gaps = 14/250 (5%)
Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
+ AV + G +S+ T ++Y A + + +A E
Sbjct: 1 MRVVIALFAVIVIAGCGSTNSK----YDKTTNWSAEQLYADAKSEMSSGGWKEARERLTA 56
Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
+PF A+++LL A+V + G+ +QA + + + YP DY YL G+
Sbjct: 57 IESRYPFGVYAQQALLELAYVNWKDGENEQALAAIDRFQQLYPNHPGTDYALYLKGLINF 116
Query: 143 QMIRDVPYDQRATKLM----------LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
+ +++RY +S Y A + N +A
Sbjct: 117 TPASAFMTSITGQDPAERDPKGLRASYDAFNELIKRYPDSKYSVDAEKRIAWLVNTIAMN 176
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
EV + RYY +RG YVAA R Q V+ ++ A EEA+ +VE+Y L + D + +
Sbjct: 177 EVHVARYYYERGAYVAAANRAQTVITDFEGAPATEEALYLMVESYDKLGMTDLKNDAQRV 236
Query: 253 IQERYPQGYW 262
+ +P +
Sbjct: 237 YDKNFPNSDF 246
>gi|325265796|ref|ZP_08132483.1| competence lipoprotein ComL [Kingella denitrificans ATCC 33394]
gi|324982779|gb|EGC18404.1| competence lipoprotein ComL [Kingella denitrificans ATCC 33394]
Length = 268
Score = 98.3 bits (242), Expect = 9e-19, Method: Composition-based stats.
Identities = 58/254 (22%), Positives = 101/254 (39%), Gaps = 10/254 (3%)
Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
+ SI + L ++ ++ +Y +A L N+S A +
Sbjct: 2 KKIVAASIVMAILSACATPNATVSKDAQMSKDWSNDRLYSEARNALNSGNYSHANALYGV 61
Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
P +SLL SA+ Y + QA +L + YP S ++DY YL G+ +
Sbjct: 62 LRARQPDGRYTEQSLLDSAYAHYKNEEMSQALALLSRFERNYPASVDMDYALYLKGLIFF 121
Query: 143 QMIR----------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
+ D A + + ++V R+ S Y + +R + + L
Sbjct: 122 AEDQSFLRKLASQDWSDRDPEANRRAFRVFEQLVNRFPQSKYAEDSRRRMAQLVDALGGH 181
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
E+ I RYY KR YVAA R Q VL Y + + EEA+A ++ +Y + A + +
Sbjct: 182 EIAIARYYAKRHAYVAANNRAQRVLQQYQNTRYVEEALAIMIFSYEKMGNTQLADDTRRV 241
Query: 253 IQERYPQGYWARYV 266
+Q+ + +
Sbjct: 242 LQQNFANSPYLAKS 255
>gi|117621430|ref|YP_858499.1| ComL family lipoprotein [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
gi|117562837|gb|ABK39785.1| lipoprotein, ComL family [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
Length = 305
Score = 98.3 bits (242), Expect = 9e-19, Method: Composition-based stats.
Identities = 54/252 (21%), Positives = 101/252 (40%), Gaps = 17/252 (6%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
K L + ++ + G + +Y+KA L L N+ A E
Sbjct: 57 KKSHLLMSLALVATLITGCSSTKPK-------VPDEPPETLYQKARLKLDAGNYLNAIEL 109
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
+PF + + L + Y QA + + +I P KN+DYV+Y+ G+
Sbjct: 110 LEALDSRYPFGAYSNQVQLDLIYAYYKQDDTAQAIANIDRFIRLNPAHKNIDYVFYMRGL 169
Query: 140 SYAQMIRDVPYD----------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
+ + D + Q +++ Y NS Y AR + +N+L
Sbjct: 170 TNMAGDYNFFQDFLGINRDDKDPSYARQAFQDFKTLLQNYPNSVYAADARARMIGLKNRL 229
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
A ++ + YY+KR +AA R +L++ Y D E+A+ ++ +Y +L + A+
Sbjct: 230 ARYDLSVAEYYVKRDALIAAANRAKLIVETYPDTAETEKALEIMINSYDSLKMPTLAQHA 289
Query: 250 VSLIQERYPQGY 261
++ + YP
Sbjct: 290 REVLAKNYPDNR 301
>gi|28199627|ref|NP_779941.1| hypothetical protein PD1756 [Xylella fastidiosa Temecula1]
gi|28057742|gb|AAO29590.1| conserved hypothetical protein [Xylella fastidiosa Temecula1]
Length = 298
Score = 98.3 bits (242), Expect = 9e-19, Method: Composition-based stats.
Identities = 63/251 (25%), Positives = 108/251 (43%), Gaps = 15/251 (5%)
Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
L + G R++ ++ D +Y+KA +K+ N++ A F +
Sbjct: 18 LLAVLLATFILITGCHRETKKN-----ADDGMPVEHLYDKAHTLMKKGNWAGAELSFKRL 72
Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
+P+ ++++ +A+ QY +GK+ A S + +I YP N+ Y+YYL G+S +
Sbjct: 73 IAQYPYGPYTEQAMVENAYAQYKSGKHDDAVSSIDRFIRTYPTHHNIPYMYYLRGLSNSN 132
Query: 144 MIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
D A + +++RY NS Y A+ +T RN A E
Sbjct: 133 RDTIFLRKVWSLDLSRRDLSAPQQAYNDFKTVLDRYPNSRYATDAKKQMTELRNMFAQYE 192
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+ + YYL+R +VAA R +L Y + +A+A L EAY L A ++
Sbjct: 193 MNVTLYYLRRTAWVAAAGRANFLLETYPQSPFQYDAVAALGEAYTHLGNKTLADNARQVL 252
Query: 254 QERYPQGYWAR 264
Q P W +
Sbjct: 253 QTNAPDHPWLK 263
>gi|71907235|ref|YP_284822.1| putative competence lipoprotein precursor [Dechloromonas aromatica
RCB]
gi|71846856|gb|AAZ46352.1| putative competence lipoprotein precursor [Dechloromonas aromatica
RCB]
Length = 257
Score = 98.3 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 59/247 (23%), Positives = 102/247 (41%), Gaps = 14/247 (5%)
Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
V F+ G S + T ++Y ++ + N+ KA +Y + FP
Sbjct: 3 VFVVAFIAGCGSTSEKF----DETSGWSAGKLYSESKDAQADGNWEKAAKYLEKLEARFP 58
Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM---- 144
+ A+++ L +V + + A + + +I +P VDYVYYL G+
Sbjct: 59 YGRYAQQAQLELGYVYWKGNEPGSALAACDRFIKLHPSHPTVDYVYYLKGLINFNEDLGL 118
Query: 145 ------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
D +A + +V R+ S Y A + N LA+ EV + R
Sbjct: 119 TAYISSQDPTERDPKAAREAFDAFKELVTRFPESKYAPDASLRMNYLVNALASLEVHVAR 178
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
YY+KRG Y+AA R Q + Y A EEAM LV +Y + + + + ++++ +P
Sbjct: 179 YYVKRGAYIAAANRAQFAVKTYPQAPAIEEAMFILVTSYDKMGMNELRDDAQRVMKKNFP 238
Query: 259 QGYWARY 265
+
Sbjct: 239 NSRYYND 245
>gi|297538119|ref|YP_003673888.1| outer membrane assembly lipoprotein YfiO [Methylotenera sp. 301]
gi|297257466|gb|ADI29311.1| outer membrane assembly lipoprotein YfiO [Methylotenera sp. 301]
Length = 269
Score = 98.3 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 57/250 (22%), Positives = 105/250 (42%), Gaps = 14/250 (5%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
K+ L + F++ + G + D T +Y+ ++++++ KA Y
Sbjct: 1 MKYILILMFAL---LMNGCAIFGAPTELDD--TKGLTAERIYQMGSEKMRDKDYDKAIVY 55
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY---- 135
F + +P A ++ L +A+ + + + +I +P NVDY YY
Sbjct: 56 FGKLESRYPNGRFAAQAQLETAYAHFKKQDPVLCVAAADRFIKLHPNHPNVDYAYYLKGL 115
Query: 136 -----LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
+ + D R+ + +V RY NS Y K A + N L+
Sbjct: 116 AVFNERGVIEKLTKQQISDRDPRSLRDSFVTFKDLVTRYPNSKYAKDATQRMVYLANSLS 175
Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
E+++ YY+KR Y+AAI R + VL Y E+A+ ++ AY + L D ++ V
Sbjct: 176 DHELDVANYYMKRQAYLAAINRCKYVLEYYPQTPGVEQALVTMISAYDLMGLDDLKKDTV 235
Query: 251 SLIQERYPQG 260
+++ YP
Sbjct: 236 RILETNYPNS 245
>gi|121999015|ref|YP_001003802.1| putative lipoprotein [Halorhodospira halophila SL1]
gi|121590420|gb|ABM63000.1| putative lipoprotein [Halorhodospira halophila SL1]
Length = 253
Score = 98.3 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 59/249 (23%), Positives = 101/249 (40%), Gaps = 16/249 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+++ ++ G R E+Y A L N+S+A E
Sbjct: 1 MHRIQRWATIALVALLATGCAGTD------PDGAAERSVEELYTDARSSLSSGNYSQAVE 54
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
F +PF A +S LM + Y AG+++ A + E + +P +++V Y Y+ G
Sbjct: 55 RFENLVARYPFGTHAVQSQLMIIYAHYLAGQHESAIAAAERFQRMHPRNEHVAYALYMRG 114
Query: 139 MSYAQMIR----------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
+S D + + E+Y +S Y+ A + R
Sbjct: 115 VSRQAQGPGGLGDLFNVDANLRDPEPKRRAFADFRELTEQYPDSEYIDDAVERMEQIRVA 174
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
LA E+ +GR+YL+R Y+A+ R + ++A Y EAM L E+Y L L +
Sbjct: 175 LAEHELYVGRFYLERSAYIASANRARTIIARYPGTPAVPEAMGMLAESYRRLGLDPLDED 234
Query: 249 VVSLIQERY 257
V ++ER+
Sbjct: 235 VERALRERH 243
>gi|120611899|ref|YP_971577.1| hypothetical protein Aave_3241 [Acidovorax citrulli AAC00-1]
gi|120590363|gb|ABM33803.1| putative transmembrane protein [Acidovorax citrulli AAC00-1]
Length = 265
Score = 98.3 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 67/261 (25%), Positives = 110/261 (42%), Gaps = 17/261 (6%)
Query: 19 LYKFAL-TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
+ +F+L + +A L G T +Y +A L ++ KA
Sbjct: 1 MPRFSLPLLTILLAAGVLAGCSSTPEDK------TAGWSPNRIYSEARDELNSNSYDKAV 54
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY----- 132
F + +A+++ L A+ QY G+ QA + + ++ +P S DY
Sbjct: 55 PLFEKLEGRAAGTPLAQQAQLEKAYAQYKGGEKAQAIATLDRFMKLHPASPAYDYALYLK 114
Query: 133 -----VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
L S+ DQ+A K + + R+ +S Y + A+ +T N
Sbjct: 115 GLVNFNDNLGLFSWLSRQDLSERDQKAAKDSFESFRELTTRFPDSRYARDAQQRMTYIVN 174
Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
LA EV + RYY +RG YVAAI R Q+ LA+Y D EEA+ L+++Y AL +
Sbjct: 175 SLAQYEVHVARYYYQRGAYVAAINRAQIALADYKDVPALEEALYILIKSYDALGMTQLRD 234
Query: 248 EVVSLIQERYPQGYWARYVET 268
+ ++ YPQ + R
Sbjct: 235 DAQRVMAASYPQSEYMRNGFK 255
>gi|332992386|gb|AEF02441.1| Competence lipoprotein ComL [Alteromonas sp. SN2]
Length = 255
Score = 98.3 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 52/255 (20%), Positives = 110/255 (43%), Gaps = 13/255 (5%)
Query: 19 LYKFALTIFFSI-AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
+ L + A+ + G S + +V +++Y +A ++ NFS A
Sbjct: 1 MKSIRLLAPVLLGAMVSVAGCSSSSDEEE--KAVMANMGAQQLYNRAKQSMEVGNFSAAA 58
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL- 136
+ +PF ++ + L + Y +GK + + + +I P +VDY YY+
Sbjct: 59 QTLGALDSRYPFGPLSHQVQLDLIYSYYKSGKSDETLATIDRFIRLNPNHSDVDYAYYMR 118
Query: 137 ---------VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
I D ++ + R++++Y +S Y AR + ++
Sbjct: 119 GLTNMESDSNLFQDLMNIDRTDRDPSKSRQAFEDFRRLMQQYPDSKYAADARKRMLHIKD 178
Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
+LA E+ I R+Y++R YVAA R + V+ ++ ++ ++A+ +V +Y L L D
Sbjct: 179 RLARYEIAIARFYMRRHAYVAAANRGRYVIEHFPESTQIQQALEIMVSSYEQLGLDDLRG 238
Query: 248 EVVSLIQERYPQGYW 262
+ ++ +P+ +
Sbjct: 239 NAMKTLKLNFPESDF 253
>gi|308048516|ref|YP_003912082.1| outer membrane assembly lipoprotein YfiO [Ferrimonas balearica DSM
9799]
gi|307630706|gb|ADN75008.1| outer membrane assembly lipoprotein YfiO [Ferrimonas balearica DSM
9799]
Length = 256
Score = 97.9 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 52/254 (20%), Positives = 98/254 (38%), Gaps = 14/254 (5%)
Query: 19 LYKFALTIFFSIAVCF-LVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
+ K ++ +++ F L R Y+ + R +Y A ++ NF+KA
Sbjct: 1 MRKITGSLLLALSSVFALSACSSTGDRSGYV---VEDRTPEALYADARQAMELGNFTKAS 57
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
+ +PF + L + Y A + + +I P ++DYVYY+
Sbjct: 58 QVLEALDSRYPFGPHKTQVQLDLIYAYYKLDDSASALANVDRFIRLNPTHPDIDYVYYMR 117
Query: 138 GMSYAQMIRDVPYDQRATKL----------MLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
G+ Q + +D + +V+ Y NS Y A+ + + +N
Sbjct: 118 GLVNMQADSYLFHDMLGIDRTDRDPSNAVAAFRDFETLVKSYPNSRYAPDAQRRMIMLKN 177
Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
+LA +++ YY+ +V A R Q VL Y E A+ ++ +Y L
Sbjct: 178 RLAEFSLKVAEYYVTMEAWVGAANRAQQVLETYPGTPATERALEIMITSYDELGQEAMRD 237
Query: 248 EVVSLIQERYPQGY 261
VS+++ +P
Sbjct: 238 HSVSVLKATFPDNR 251
>gi|77164235|ref|YP_342760.1| transmembrane protein [Nitrosococcus oceani ATCC 19707]
gi|254435638|ref|ZP_05049145.1| outer membrane assembly lipoprotein YfiO [Nitrosococcus oceani
AFC27]
gi|76882549|gb|ABA57230.1| probable transmembrane protein [Nitrosococcus oceani ATCC 19707]
gi|207088749|gb|EDZ66021.1| outer membrane assembly lipoprotein YfiO [Nitrosococcus oceani
AFC27]
Length = 261
Score = 97.9 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 54/249 (21%), Positives = 105/249 (42%), Gaps = 12/249 (4%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
+ L V +L G Y +A L ++ KA ++
Sbjct: 1 MWFLKFLSLCLVLWLGGCAWL--DKPPPKQPEADWTVERFYAEAKTALDAGDYQKAISFY 58
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
Q +PF A+++LL SA+ Y + + A + + +I YP + ++DY +YL G+
Sbjct: 59 EQLEARYPFGAYAQQALLESAYAYYKFNEPESALAALDRFIRLYPLNSHMDYAHYLKGLV 118
Query: 141 YAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
+ D + + L+ +++R+ +S Y + + + RN+LA
Sbjct: 119 SFHRGVGLVEKYIPRDETQRDPESARNALKSFKTLIQRFPDSKYAEDSAQRIVYLRNRLA 178
Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
E+ + YY++RG Y+ AI R + V+ NY EA+ + Y L L + + +
Sbjct: 179 QHEINVAHYYMRRGAYIGAINRAKYVVENYQRTPPVPEALTIMARGYEILGLNELKEDTL 238
Query: 251 SLIQERYPQ 259
+++ +P
Sbjct: 239 RVLEASFPG 247
>gi|256822305|ref|YP_003146268.1| outer membrane assembly lipoprotein YfiO [Kangiella koreensis DSM
16069]
gi|256795844|gb|ACV26500.1| outer membrane assembly lipoprotein YfiO [Kangiella koreensis DSM
16069]
Length = 268
Score = 97.9 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 54/259 (20%), Positives = 107/259 (41%), Gaps = 11/259 (4%)
Query: 17 YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76
+ K + I ++ V G + + +E+++ A ++ N+ +A
Sbjct: 11 LNMQKHS-IIVLALLVFSFAGCSSTPKEPDLNKTKVESMAAQELFDGAKRSMRNGNYVRA 69
Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
E + +PF ++ ++ L + + Y+ +L + ++ Q+P+ +N DYVYY+
Sbjct: 70 TELLEEIDTRYPFGRISEQAKLELIYAYFKRADYESGQALADRFLRQHPQHENADYVYYM 129
Query: 137 VGMSYAQMI----------RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
G+ + + D K +VE Y S Y AR + R
Sbjct: 130 KGVMHYEQEVGTFKEVFSADIEKRDTSNIKAAFDNFKALVEVYPESEYAPDARKRMIQIR 189
Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
N LA E+ + RYY++R Y+ A R + ++ N+ A+ L+ +Y L L + +
Sbjct: 190 NLLADYELHVARYYMQRDSYIGAANRAKYIVENFPKTPAVPSALEILINSYKILELPEIS 249
Query: 247 REVVSLIQERYPQGYWARY 265
E ++ YP A +
Sbjct: 250 EEYRKVLLLNYPDYKLAEF 268
>gi|330831469|ref|YP_004394421.1| ComL family lipoprotein [Aeromonas veronii B565]
gi|328806605|gb|AEB51804.1| Lipoprotein, ComL family [Aeromonas veronii B565]
Length = 254
Score = 97.9 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 59/255 (23%), Positives = 106/255 (41%), Gaps = 17/255 (6%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
K L + ++ + G + +Y+KA L L N+ +A E
Sbjct: 6 KKSHLLMSLALVATLITGCSSTKPK-------VPDEPPETLYQKARLKLDVGNYVQATEL 58
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
+PF + + L + Y QA + + +I P KN+DYV+Y+ G+
Sbjct: 59 LEALDSRYPFGAYSNQVQLDLIYAYYKQDDTAQAIANIDRFIRLNPAHKNIDYVFYMRGL 118
Query: 140 SYAQMIRDVPY----------DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
+ + D + Q +++ Y NS Y AR + +N+L
Sbjct: 119 TNMAADYNFFQSLFGIDRDDKDPAYARQAFQDFKTLLQNYPNSVYAADARARMIGLKNRL 178
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
A ++ + YY+KR VAA R +L++ Y D E+A+ +VE+Y +L + A+
Sbjct: 179 ARYDLSVAEYYVKRDALVAAANRAKLIVETYPDTAETEKALEIMVESYDSLKMPQLAKHA 238
Query: 250 VSLIQERYPQGYWAR 264
++ + YP+ AR
Sbjct: 239 REVLAKNYPENRLAR 253
>gi|182682371|ref|YP_001830531.1| competence lipoprotein [Xylella fastidiosa M23]
gi|32130367|sp|Q87AR6|Y1756_XYLFT RecName: Full=UPF0169 lipoprotein PD_1756; Flags: Precursor
gi|182632481|gb|ACB93257.1| competence lipoprotein [Xylella fastidiosa M23]
Length = 293
Score = 97.9 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 63/251 (25%), Positives = 108/251 (43%), Gaps = 15/251 (5%)
Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
L + G R++ ++ D +Y+KA +K+ N++ A F +
Sbjct: 13 LLAVLLATFILITGCHRETKKN-----ADDGMPVEHLYDKAHTLMKKGNWAGAELSFKRL 67
Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
+P+ ++++ +A+ QY +GK+ A S + +I YP N+ Y+YYL G+S +
Sbjct: 68 IAQYPYGPYTEQAMVENAYAQYKSGKHDDAVSSIDRFIRTYPTHHNIPYMYYLRGLSNSN 127
Query: 144 MIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
D A + +++RY NS Y A+ +T RN A E
Sbjct: 128 RDTIFLRKVWSLDLSRRDLSAPQQAYNDFKTVLDRYPNSRYATDAKKQMTELRNMFAQYE 187
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+ + YYL+R +VAA R +L Y + +A+A L EAY L A ++
Sbjct: 188 MNVTLYYLRRTAWVAAAGRANFLLETYPQSPFQYDAVAALGEAYTHLGNKTLADNARQVL 247
Query: 254 QERYPQGYWAR 264
Q P W +
Sbjct: 248 QTNAPDHPWLK 258
>gi|254281628|ref|ZP_04956596.1| competence protein ComL [gamma proteobacterium NOR51-B]
gi|219677831|gb|EED34180.1| competence protein ComL [gamma proteobacterium NOR51-B]
Length = 307
Score = 97.9 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 61/253 (24%), Positives = 112/253 (44%), Gaps = 16/253 (6%)
Query: 18 QLYK-FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76
++Y+ L + V L ++ DS ++++Y +A +L+ +F A
Sbjct: 13 KMYRTLTLGALTACVVAMLAACSGNDELEMAADSG-----EQQIYLEAQRYLENDSFDLA 67
Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
+PF A ++ L F Y +++ A +I +P+ NVDY YY+
Sbjct: 68 IRTLQMLESRYPFGRYAEQAQLELVFAHYGGREFEAAIEAANRFIRLHPQHPNVDYAYYM 127
Query: 137 VGMSYAQMI----------RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
G++ + D D K L ++++ R+ +SPY AR + R
Sbjct: 128 KGLAAYDIDGGFLASLVPTDDTKRDVGHMKEALAEFAQLLARFPDSPYAPDARLRMVHLR 187
Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
N LA E+ + YY +RG Y+AA+ R + V+ N + +A + +AY+ L L D A
Sbjct: 188 NMLARHEIHVANYYFRRGAYMAALNRGRYVVENLEQTPSVADGLAIMAQAYLLLGLDDLA 247
Query: 247 REVVSLIQERYPQ 259
+ + +++ YP
Sbjct: 248 IDTIEVLKANYPN 260
>gi|254482813|ref|ZP_05096050.1| outer membrane assembly lipoprotein YfiO [marine gamma
proteobacterium HTCC2148]
gi|214036894|gb|EEB77564.1| outer membrane assembly lipoprotein YfiO [marine gamma
proteobacterium HTCC2148]
Length = 289
Score = 97.9 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 61/250 (24%), Positives = 109/250 (43%), Gaps = 17/250 (6%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
K+AL S+ + G L + ++++YE+A +L+ +N++ A
Sbjct: 1 MKYALVFLLSLIII---GCSGNDE----LPDIAADTGEQQIYEEAQRYLRNKNWNLAVRS 53
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL--- 136
+PF A +S L + Y+ ++ A E +I +P NVDY YY+
Sbjct: 54 LQVLESRYPFGKYAEQSQLEIIYAHYNGYEHDAAVEAAERFIRLHPAHPNVDYAYYMKGL 113
Query: 137 -------VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
S + D K +++V R+ +SPY AR + RN L
Sbjct: 114 AAFAGNDDIFSRFLPTDESERDVSQAKEAFAEFNQLVSRFPDSPYAPDARARMVHLRNLL 173
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
A E+ + YY +RG Y+AA R + V+ N+ + +A + + Y+ L L D A++
Sbjct: 174 ARHEILVANYYFRRGAYMAATNRGRYVVENFQRTPAVADGLAVMAQGYILLGLEDLAKDT 233
Query: 250 VSLIQERYPQ 259
+ ++ YP+
Sbjct: 234 IGILAMNYPE 243
>gi|190575602|ref|YP_001973447.1| putative competence lipoprotein [Stenotrophomonas maltophilia
K279a]
gi|190013524|emb|CAQ47159.1| putative competence lipoprotein precursor [Stenotrophomonas
maltophilia K279a]
Length = 295
Score = 97.9 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 61/251 (24%), Positives = 109/251 (43%), Gaps = 13/251 (5%)
Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
LT + V G R + + D + ++YEK+ ++ N+S A F +
Sbjct: 14 LTALLLVLVIAATGCHRGAKKG---DRPDEGTPVEQLYEKSHKLMQGGNWSGAETSFRRL 70
Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
+P+ ++++ +A+ QY AGK+ A S + +I YP +N+ Y+YYL G++ +
Sbjct: 71 VAQYPYGPYTEQAMIETAYAQYKAGKHDDAVSSIDRFIRTYPTHRNIAYLYYLRGLANSN 130
Query: 144 MIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
D + +V+RY NS Y AR + R+ A E
Sbjct: 131 RSTVFLRRVWSLDASRRDLSTPHQAYSDFNIVVDRYPNSRYAADARQRMLELRDVFAQHE 190
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
++ YY++RG +V+A R +L Y + +A+A L ++Y L A + ++
Sbjct: 191 LDNALYYMRRGAWVSAAGRANYLLETYPQSAFQYDAVAVLADSYTHLGNKTLADDARRVL 250
Query: 254 QERYPQGYWAR 264
Q P W
Sbjct: 251 QLNQPDHPWLE 261
>gi|71276442|ref|ZP_00652718.1| putative lipoprotein [Xylella fastidiosa Dixon]
gi|71901553|ref|ZP_00683636.1| putative lipoprotein [Xylella fastidiosa Ann-1]
gi|170730992|ref|YP_001776425.1| putative lipoprotein [Xylella fastidiosa M12]
gi|71162758|gb|EAO12484.1| putative lipoprotein [Xylella fastidiosa Dixon]
gi|71728677|gb|EAO30825.1| putative lipoprotein [Xylella fastidiosa Ann-1]
gi|167965785|gb|ACA12795.1| putative lipoprotein [Xylella fastidiosa M12]
Length = 293
Score = 97.9 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 63/251 (25%), Positives = 108/251 (43%), Gaps = 15/251 (5%)
Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
L + G R++ ++ D +Y+KA +K+ N++ A F +
Sbjct: 13 LLAMLLATFILITGCHRETKKN-----ADDGMPVEHLYDKAHTLMKKGNWAGAEVSFKRL 67
Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
+P+ ++++ +A+ QY +GK+ A S + +I YP N+ Y+YYL G+S +
Sbjct: 68 IAQYPYGPYTEQAMVENAYAQYKSGKHDDAVSSIDRFIRTYPTHHNIPYMYYLRGLSNSN 127
Query: 144 MIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
D A + +++RY NS Y A+ +T RN A E
Sbjct: 128 RDTIFLRKVWSLDLSRRDLSAPQQAYNDFKTVLDRYPNSRYAADAKKQMTELRNMFAQYE 187
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+ + YYL+R +VAA R +L Y + +A+A L EAY L A ++
Sbjct: 188 MNVTLYYLRRTAWVAAAGRANFLLETYPQSPFQYDAVAALGEAYTHLGNKTLADNARQVL 247
Query: 254 QERYPQGYWAR 264
Q P W +
Sbjct: 248 QTNAPDHPWLK 258
>gi|226943323|ref|YP_002798396.1| competence protein ComL [Azotobacter vinelandii DJ]
gi|226718250|gb|ACO77421.1| competence protein ComL [Azotobacter vinelandii DJ]
Length = 337
Score = 97.9 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 59/249 (23%), Positives = 105/249 (42%), Gaps = 13/249 (5%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
+ ++ + + ++ +D + E+Y++A L +NF A
Sbjct: 1 MHLKHLLLIASLVLIAACGSKKEKEEVVDE---NLSETELYQQAQNDLNNENFGSATTKL 57
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
+PF A ++ L + Y + + + S E +I +P+ NVDY YYL G++
Sbjct: 58 KALESRYPFGRYAEQAQLELIYAYYKSQETDASRSAAERFIRLHPQHPNVDYAYYLKGLA 117
Query: 141 YAQMIR----------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
R D A + +++ R+ NS Y A+ + RN LA
Sbjct: 118 SFDQDRGLLSRFLPLDMTKRDPGAARDSFNEFAQLTSRFPNSRYAPDAKARMVYLRNLLA 177
Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
A E+ + YYLKR YVAA R + V+ N + + +A ++EAY + L + A +
Sbjct: 178 AYEIHVAHYYLKREAYVAAANRGRYVVENLQETPAVGDGLAVMIEAYQRMTLDELATTSL 237
Query: 251 SLIQERYPQ 259
++ YP
Sbjct: 238 ETLKLNYPD 246
>gi|194366932|ref|YP_002029542.1| outer membrane assembly lipoprotein YfiO [Stenotrophomonas
maltophilia R551-3]
gi|194349736|gb|ACF52859.1| outer membrane assembly lipoprotein YfiO [Stenotrophomonas
maltophilia R551-3]
Length = 289
Score = 97.6 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 60/251 (23%), Positives = 108/251 (43%), Gaps = 13/251 (5%)
Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
LT + V G R + + D + ++YEK+ ++ N+S A F +
Sbjct: 8 LTALLLVLVIAATGCHRGAKKG---DRPDEGTPVEQLYEKSHKLMQGGNWSGAESSFRRL 64
Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
+P+ ++++ +A+ QY AGK+ A S + +I YP +N+ Y+YYL G++ +
Sbjct: 65 VAQYPYGPYTEQAMIETAYAQYKAGKHDDAVSSIDRFIRTYPTHRNIAYLYYLRGLANSN 124
Query: 144 MIRDVPYDQ----------RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
+ +V+RY NS Y AR + R+ A E
Sbjct: 125 RSTVFLRHVWSLDASRRDLSTPHQAYSDFNIVVDRYPNSRYAADARQRMLELRDVFAQHE 184
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
++ YY++RG +V+A R +L Y + +A+A L ++Y L A + ++
Sbjct: 185 LDNALYYMRRGAWVSAAGRANYLLETYPQSAFQYDAVAVLADSYTHLGNKTLADDARRVL 244
Query: 254 QERYPQGYWAR 264
Q P W
Sbjct: 245 QLNQPDHPWLE 255
>gi|307578654|gb|ADN62623.1| competence lipoprotein [Xylella fastidiosa subsp. fastidiosa GB514]
Length = 293
Score = 97.6 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 63/251 (25%), Positives = 108/251 (43%), Gaps = 15/251 (5%)
Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
L + G R++ ++ D +Y+KA +K+ N++ A F +
Sbjct: 13 LLAVLLATFILITGCHRETKKN-----ADDGMPVEHLYDKAHXLMKKGNWAGAELSFKRL 67
Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
+P+ ++++ +A+ QY +GK+ A S + +I YP N+ Y+YYL G+S +
Sbjct: 68 IAQYPYGPYTEQAMVENAYAQYKSGKHDDAVSSIDRFIRTYPTHHNIPYMYYLRGLSNSN 127
Query: 144 MIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
D A + +++RY NS Y A+ +T RN A E
Sbjct: 128 RDTIFLRKVWSLDLSRRDLSAPQQAYNDFKTVLDRYPNSRYATDAKKQMTELRNMFAQYE 187
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+ + YYL+R +VAA R +L Y + +A+A L EAY L A ++
Sbjct: 188 MNVTLYYLRRTAWVAAAGRANFLLETYPQSPFQYDAVAALGEAYTHLGNKTLADNARQVL 247
Query: 254 QERYPQGYWAR 264
Q P W +
Sbjct: 248 QTNAPDHPWLK 258
>gi|170728052|ref|YP_001762078.1| putative lipoprotein [Shewanella woodyi ATCC 51908]
gi|169813399|gb|ACA87983.1| putative lipoprotein [Shewanella woodyi ATCC 51908]
Length = 268
Score = 97.6 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 50/254 (19%), Positives = 90/254 (35%), Gaps = 14/254 (5%)
Query: 17 YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76
++ F + + + T +Y +A ++ N+SKA
Sbjct: 14 LSMHTFVKGAVIGLFSLAITACSSNQEDQL----KTSKSSPDVLYSQARTSMELGNYSKA 69
Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
+PF + L + Y + + +I P KN+DYVYY+
Sbjct: 70 VRSLEALDSRYPFGPHKTQVQLDLIYAYYKLDDPASGIANIDRFIRLNPTHKNIDYVYYM 129
Query: 137 VGMSYAQMIRDVPYDQRATK----------LMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
G+ Q + +D + R+++ Y NS Y A + +
Sbjct: 130 RGLVNMQSDNYMFHDMLNIDRTDRDPKVAQDAFKDFDRLIKSYPNSKYAPDAAKRMQQLK 189
Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
N+LA + + YY+K + AA R Q V+ + E A+ + AY L
Sbjct: 190 NRLAKYSINVAEYYIKMNAWSAAATRAQSVMETFPGTPSTERALEIMSIAYGELGQAKLK 249
Query: 247 REVVSLIQERYPQG 260
V+S++Q +P
Sbjct: 250 ENVLSVMQANFPNN 263
>gi|157962984|ref|YP_001503018.1| putative lipoprotein [Shewanella pealeana ATCC 700345]
gi|157847984|gb|ABV88483.1| putative lipoprotein [Shewanella pealeana ATCC 700345]
Length = 268
Score = 97.6 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 53/253 (20%), Positives = 95/253 (37%), Gaps = 14/253 (5%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
++K A ++ + + D + +Y +A ++ N+SKA
Sbjct: 16 MHKIAKSVAVVLITLAATACSSKQGEDPAMTK----SSPEVLYSQARTSMELGNYSKAVR 71
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
FPF + L + Y + + +I P K++DYVYY+ G
Sbjct: 72 SLEALDSRFPFGPHKTQVQLDLIYAYYKLDDPASGIANIDRFIRLNPTHKDIDYVYYMRG 131
Query: 139 MSYAQMIRDVPYDQRATK----------LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
+ Q R + +D R+++ Y NS Y A+ + +N+
Sbjct: 132 LVNMQSDRYLFHDMLNIDRSDRDPKAAQDAFNDFDRLIKSYPNSKYAADAQKRMQHLKNR 191
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
LA +++ YY+K + AA R Q VL Y E+A+ + AY L
Sbjct: 192 LALYSIKVAEYYIKMNAWSAAAIRAQSVLETYPGTPSTEKALEIMSTAYGELGQEKLKDH 251
Query: 249 VVSLIQERYPQGY 261
V+ +++ YP
Sbjct: 252 VLMVMKANYPNNK 264
>gi|261377889|ref|ZP_05982462.1| competence lipoprotein ComL [Neisseria cinerea ATCC 14685]
gi|269145742|gb|EEZ72160.1| competence lipoprotein ComL [Neisseria cinerea ATCC 14685]
Length = 267
Score = 97.6 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 56/257 (21%), Positives = 112/257 (43%), Gaps = 14/257 (5%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K LT+ +A L + + D +T ++Y +A L N+++A +
Sbjct: 1 MKKILLTVSLGLA---LSACATKGTVDKDA-QITQDWSVEKLYAEAQDELNSSNYTRAVK 56
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY------ 132
+ FP + A++S L +A+ Y + +A + + + +P+ N+DY
Sbjct: 57 LYEILESRFPTSRHAQQSQLDTAYAYYKDDEKDKALAAIDRFRRLHPQHPNMDYALYLRG 116
Query: 133 ----VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
++ D +A + Q + +V+R+ NS Y A + +
Sbjct: 117 LVLFNEDQSFLNKLASQDWSDRDPKANREAYQAFAELVQRFPNSKYAADATARMIKLVDA 176
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
L E+ + RYY+KRG Y+AA R Q ++ +Y + + EE++A L AY L A +
Sbjct: 177 LGGNEMSVARYYMKRGAYIAAANRAQKIIGSYQNTRYVEESLAILELAYKKLDKPQLAAD 236
Query: 249 VVSLIQERYPQGYWARY 265
+++ +P+ + +
Sbjct: 237 THRVLEANFPKSPFLKQ 253
>gi|134095126|ref|YP_001100201.1| TPR repeat-containing protein [Herminiimonas arsenicoxydans]
gi|133739029|emb|CAL62077.1| Competence lipoprotein ComL precursor [Herminiimonas
arsenicoxydans]
Length = 261
Score = 97.2 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 57/251 (22%), Positives = 102/251 (40%), Gaps = 14/251 (5%)
Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
L + + L + T ++Y +A + N+ KA +F +
Sbjct: 1 MLKLTYIALAFLLSACSLTPDQI----DETKNWSPSKLYSEAREEMNTGNYEKAVSHFEK 56
Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV----- 137
+PF A+++ + A+ Y G QA + E +I +P+ NVDY+YYL
Sbjct: 57 LESRYPFGTYAQQAQMEIAYAYYRQGDQPQALAAVERFIKLHPDHPNVDYMYYLRGLINF 116
Query: 138 -----GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
+ D +A + + ER+ +S Y A + N +A
Sbjct: 117 NDKVSVFDFLSRQDPTERDPKAAREAFDSFKLLTERFPDSKYTPDASARLAYLVNAMAQY 176
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+V + YY +RG Y+AA R Q + NY A AE A+ ++++Y AL L + +
Sbjct: 177 DVHVANYYYRRGAYLAAANRAQAAVKNYPGAPAAEGALYVMIQSYDALNLPQLRDDAERV 236
Query: 253 IQERYPQGYWA 263
++ +P +
Sbjct: 237 MKTNFPNSVYF 247
>gi|163856157|ref|YP_001630454.1| competence lipoprotein precursor [Bordetella petrii DSM 12804]
gi|163259885|emb|CAP42186.1| competence lipoprotein precursor [Bordetella petrii]
Length = 303
Score = 97.2 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 56/244 (22%), Positives = 97/244 (39%), Gaps = 14/244 (5%)
Query: 27 FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86
G ++ T ++Y A +++A E
Sbjct: 44 VVLSIALVAAGCSGTDTK----YDKTAGWSAEQLYADAKAETAAGAWNEARERLTAIESR 99
Query: 87 FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV--------- 137
+PF A+++L+ A+V + G+ +QA + + + YP DY+ YL
Sbjct: 100 YPFGVYAQQALIDLAYVNWKDGENEQALAAIDRFQQMYPNHPGTDYMLYLKGLINFTPAS 159
Query: 138 -GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196
MS D + + + +++RY +S Y A VT N +A EV +
Sbjct: 160 AFMSNLTGQDPAERDPKGLRASYDAFNELIKRYPSSKYTPDAEKRVTWLVNAIAMNEVYV 219
Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
RYY +RG YVAA R Q V+ ++ AEEA+ + +Y L + D + +++
Sbjct: 220 ARYYYERGAYVAAANRAQTVITDFEGVPAAEEALVIMAASYDKLGMTDLKNDAERVLKTN 279
Query: 257 YPQG 260
YP
Sbjct: 280 YPDS 283
>gi|296314699|ref|ZP_06864640.1| competence lipoprotein ComL [Neisseria polysaccharea ATCC 43768]
gi|296838533|gb|EFH22471.1| competence lipoprotein ComL [Neisseria polysaccharea ATCC 43768]
Length = 267
Score = 97.2 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 57/258 (22%), Positives = 113/258 (43%), Gaps = 14/258 (5%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ KF LT+ +A L + + D +T ++Y +A L N+++A +
Sbjct: 1 MKKFLLTVSLGLA---LSACATKGTVDKDA-QITQDWSVEKLYAEAQDELNSSNYTRAVK 56
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY------ 132
+ FP + A++S L +A+ Y + +A + + + +P+ N+DY
Sbjct: 57 LYEILESRFPTSRHAQQSQLDTAYAYYKDDEKDKALAAIDRFRRLHPQHPNMDYALYLRG 116
Query: 133 ----VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
++ D +A + Q + +V+R+ NS Y A + +
Sbjct: 117 LVLFNEDQSFLNKLASQDWSDRDPKANREAYQAFAELVQRFPNSKYAADATARMIKLVDA 176
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
L E+ + RYY+KRG Y+AA R Q ++ +Y + + EE++A L AY L A +
Sbjct: 177 LGGNEMSVARYYMKRGAYIAAANRAQKIIGSYQNTRYVEESLAILELAYKKLDKPQLAAD 236
Query: 249 VVSLIQERYPQGYWARYV 266
+++ +P+ + +
Sbjct: 237 THRVLEANFPKSPFLTHA 254
>gi|52425875|ref|YP_089012.1| NrfG protein [Mannheimia succiniciproducens MBEL55E]
gi|52307927|gb|AAU38427.1| NrfG protein [Mannheimia succiniciproducens MBEL55E]
Length = 297
Score = 97.2 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 53/260 (20%), Positives = 111/260 (42%), Gaps = 19/260 (7%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ KF +++V + + + ++E++ +L+E N+++A
Sbjct: 1 MRKFKSLTLIALSVLVIASCSSS-------EKPVEQASEQELFSTGANYLQEGNYTQATR 53
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL-- 136
Y FP + + ++ L F Y + Y + + + ++ Q+P+S+++DYV Y+
Sbjct: 54 YLEAVDSRFPGSSYSEQAELNLIFSTYKSQDYTKTLTTADRFLQQFPQSQHLDYVLYMAA 113
Query: 137 --------VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
+ + + K +V+ + NSPY A + +++
Sbjct: 114 LTNSALGDNLFQDFFGVDRSTRETTSMKTAFNNFQTLVQNFPNSPYTPDALARMAYIKDR 173
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
LA E+EI ++Y KR +VA R +L +Y D + EA+ L E+Y + L A +
Sbjct: 174 LARHELEIAKFYAKRSAWVATSNRITGMLRSYPDTQATLEALPLLQESYEKMGLTQLASQ 233
Query: 249 VVSLIQERYPQGYWARYVET 268
+L++ +G + E
Sbjct: 234 AATLVKAN--EGRVIKEAEK 251
>gi|163750157|ref|ZP_02157400.1| hypothetical protein KT99_20856 [Shewanella benthica KT99]
gi|161330214|gb|EDQ01196.1| hypothetical protein KT99_20856 [Shewanella benthica KT99]
Length = 269
Score = 97.2 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 50/251 (19%), Positives = 94/251 (37%), Gaps = 14/251 (5%)
Query: 17 YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76
++KFA ++ + ++ + R +Y +A ++ NFSKA
Sbjct: 14 LSMHKFAKGAVLALFSIAITACSSSPDEELKANK----RSPDVLYSQARTSMELGNFSKA 69
Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
+PF + L + Y + + +I P K++DYVYY+
Sbjct: 70 VRSLEALDSRYPFGPHKTQVQLDLIYAYYKLDDPASGIANIDRFIRLNPTHKDIDYVYYM 129
Query: 137 VGMSYAQMIRDVPYDQRATK----------LMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
G+ Q + +D + R+++ Y NS Y A + +
Sbjct: 130 RGLVNMQSDSYMFHDMLNIDRTDRDPKVAQDAFKDFDRLIKSYPNSKYAYDAAQRMQFLK 189
Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
N+LA + + YY+K + AA R Q V+ Y E A+ + +AY L
Sbjct: 190 NRLAKYSINVAEYYMKMNAWSAAAIRAQSVMETYPGTPSTEHALEIMADAYGELGQEKLK 249
Query: 247 REVVSLIQERY 257
+++++ Y
Sbjct: 250 ENTLTVMKANY 260
>gi|15676601|ref|NP_273745.1| competence lipoprotein [Neisseria meningitidis MC58]
gi|18203154|sp|Q9K0B1|COML_NEIMB RecName: Full=Competence lipoprotein ComL; Flags: Precursor
gi|7225932|gb|AAF41120.1| competence lipoprotein ComL [Neisseria meningitidis MC58]
gi|316983680|gb|EFV62661.1| competence lipoprotein comL [Neisseria meningitidis H44/76]
gi|325200612|gb|ADY96067.1| competence lipoprotein comL [Neisseria meningitidis H44/76]
Length = 267
Score = 97.2 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 57/257 (22%), Positives = 112/257 (43%), Gaps = 14/257 (5%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K LT+ +A L Q + D +T ++Y +A L N+++A +
Sbjct: 1 MKKILLTVSLGLA---LSACATQGTVDKDA-QITQDWSVEKLYAEAQDELNSSNYTRAVK 56
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY------ 132
+ FP + A++S L +A+ Y + +A + + + +P+ N+DY
Sbjct: 57 LYEILESRFPTSRHAQQSQLDTAYAYYKDDEKDKALAAIDRFRRLHPQHPNMDYALYLRG 116
Query: 133 ----VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
++ D +A + Q + +V+R+ NS Y A + +
Sbjct: 117 LVLFNEDQSFLNKLASQDWSDRDPKANREAYQAFAELVQRFPNSKYAADATARMVKLVDA 176
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
L E+ + RYY+KRG Y+AA R Q ++ +Y + + EE++A L AY L A +
Sbjct: 177 LGGNEMSVARYYMKRGAYIAAANRAQKIIGSYQNTRYVEESLAILELAYKKLDKPRLAAD 236
Query: 249 VVSLIQERYPQGYWARY 265
+++ +P+ + +
Sbjct: 237 TRRVLETNFPKSPFLKQ 253
>gi|189183077|ref|YP_001936862.1| ComL-like lipoprotein [Orientia tsutsugamushi str. Ikeda]
gi|189179848|dbj|BAG39628.1| ComL-like lipoprotein [Orientia tsutsugamushi str. Ikeda]
Length = 264
Score = 97.2 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 50/260 (19%), Positives = 123/260 (47%), Gaps = 8/260 (3%)
Query: 12 FEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQ 71
+++F T+F + + + ++ + L + + Y +A L +++
Sbjct: 7 IINKLLNMFRFICTLFVLLCFTNCIVFAKEKTTITCL-------SEDDAYSRAELLFQKK 59
Query: 72 NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
++ A + F + A K+ LM + Y AG+Y +A+ + + +I +P + +
Sbjct: 60 KYNAAAKQFFDIFVQHLGSNTATKAELMRGYSLYLAGQYSEASEVLDNFIRLHPVHQKIA 119
Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
VYYL ++ + + ++ + ++++++ S + A+ + V LA
Sbjct: 120 DVYYLKALAEYKQAHNQQDLEQL-LHARLELQQVIDKFPKSDFAIKAKEKINVISKNLAG 178
Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
+++IG++YL + +AA+ RF V+ YS + EA+ R+ ++Y L E +E ++
Sbjct: 179 SQIDIGKFYLNKKNPIAALNRFNTVVDKYSHTSYYPEAIYRIAQSYALLGRKQEMKEQLA 238
Query: 252 LIQERYPQGYWARYVETLVK 271
++ ++P W++ +L++
Sbjct: 239 ILNSKFPNSTWSKRASSLLQ 258
>gi|254525277|ref|ZP_05137332.1| competence lipoprotein [Stenotrophomonas sp. SKA14]
gi|219722868|gb|EED41393.1| competence lipoprotein [Stenotrophomonas sp. SKA14]
Length = 289
Score = 96.8 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 61/251 (24%), Positives = 109/251 (43%), Gaps = 13/251 (5%)
Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
LT + V G R + + D + ++YEK+ ++ N+S A F +
Sbjct: 8 LTALLLVLVIAATGCHRGAKKG---DRPDEGTPVEQLYEKSHKLMQGGNWSGAETSFRRL 64
Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
+P+ ++++ +A+ QY AGK+ A S + +I YP +N+ Y+YYL G++ +
Sbjct: 65 VAQYPYGPYTEQAMIETAYAQYKAGKHDDAVSSIDRFIRTYPTHRNIAYLYYLRGLANSN 124
Query: 144 MIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
D + +V+RY NS Y AR + R+ A E
Sbjct: 125 RSTVFLRRVWSLDASRRDLSTPHQAYSDFNIVVDRYPNSRYAADARSRMLELRDVFAQHE 184
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
++ YY++RG +V+A R +L Y + +A+A L ++Y L A + ++
Sbjct: 185 LDNALYYMRRGAWVSAAGRANYLLETYPQSAFQYDAVAVLADSYTHLGNKTLADDARRVL 244
Query: 254 QERYPQGYWAR 264
Q P W
Sbjct: 245 QLNQPDHPWLE 255
>gi|241760147|ref|ZP_04758245.1| competence lipoprotein ComL [Neisseria flavescens SK114]
gi|241319601|gb|EER56031.1| competence lipoprotein ComL [Neisseria flavescens SK114]
Length = 267
Score = 96.8 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 55/252 (21%), Positives = 106/252 (42%), Gaps = 10/252 (3%)
Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
I +++ + +T ++Y +A L N+++A + +
Sbjct: 1 MKKILLVVSLGLALSACANKGTIDKDAQITQDWSVEKLYAEAQDELNSNNYTRAVKLYEI 60
Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY---------- 132
FP A++S L +A+ Y + ++A + + +P+ N+DY
Sbjct: 61 LESRFPNGRYAQQSQLDTAYAYYKDDEPEKALAAIARFQRHHPQHPNMDYALYLKGLVLF 120
Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
++ D +A + Q + +V+RY NS Y A + + L
Sbjct: 121 NEDQSFLNKLASQDWSDRDPKANRDAYQAFAELVQRYPNSKYAADATERMAKLVDALGGN 180
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
E+ + RYY+KRG YVAA+ R Q ++A Y + + EEA+A + AY L A + +
Sbjct: 181 EMSVARYYMKRGAYVAAVNRAQKIVARYQNTRYVEEALAMMELAYKKLDKPQLAADTRRV 240
Query: 253 IQERYPQGYWAR 264
++ +PQ + +
Sbjct: 241 LETNFPQSPFLQ 252
>gi|332974184|gb|EGK11118.1| DNA uptake lipoprotein family protein [Psychrobacter sp.
1501(2011)]
Length = 387
Score = 96.8 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 63/253 (24%), Positives = 112/253 (44%), Gaps = 13/253 (5%)
Query: 20 YKFALTIFFSIA-VCFLVGWE--RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76
K LT+ A + L G + + + T + + Y++AV + + + A
Sbjct: 21 RKTKLTVALLTAGMLSLTGCQTLKNITGKDSDAVATAEKTDAQYYKEAVDAMDKGRYIYA 80
Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
E ++ +P A ++LL + Q+ + +Y A + E++I YP + VDY YY+
Sbjct: 81 AEQLSELRTFYPTGAYAEQALLDLMYSQFQSNEYALAVTSAEQFIKLYPRNNQVDYAYYV 140
Query: 137 VGMSYAQ----------MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
G++ Q ++ D +L ++ ++ NS Y A +T
Sbjct: 141 RGVANMQAGTSSLLNITKLQQAHRDTSYYRLAFGNFQELLAKFPNSSYAPDAAQRMTYIY 200
Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
NQ A E+ R+Y+KR YVAA R + V + ++ EA+A L L L D A
Sbjct: 201 NQFAESELSAARWYIKREAYVAAANRAKWVFQYFPQSQQVPEAIAILAYTNEQLGLNDLA 260
Query: 247 REVVSLIQERYPQ 259
++ +L+Q YP+
Sbjct: 261 QQYKTLLQINYPE 273
>gi|261380319|ref|ZP_05984892.1| competence lipoprotein ComL [Neisseria subflava NJ9703]
gi|284796837|gb|EFC52184.1| competence lipoprotein ComL [Neisseria subflava NJ9703]
Length = 267
Score = 96.8 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 54/252 (21%), Positives = 105/252 (41%), Gaps = 10/252 (3%)
Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
I +++ + +T ++Y +A L N+++A + +
Sbjct: 1 MKKILLVVSLGLALSACANKGTIDKDAQITQDWSVEKLYAEAQDELNSNNYTRAVKLYEI 60
Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY---------- 132
FP A++S L +A+ Y + ++A + + +P+ N+DY
Sbjct: 61 LESRFPNGRYAQQSQLDTAYAYYKDDEPEKALAAIARFQRHHPQHPNMDYALYLKGLVLF 120
Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
++ D +A + Q + +V+RY NS Y A + + L
Sbjct: 121 NEDQSFLNKLASQDWSDRDPKANRDAYQAFAELVQRYPNSKYAADATERMAKLVDALGGN 180
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
E+ + RYY+KRG YVAA R Q +++ Y + + EEA+A + AY L A + +
Sbjct: 181 EMSVARYYMKRGAYVAAANRAQKIVSRYQNTRYVEEALAMMELAYKKLDKPQLAADTRRV 240
Query: 253 IQERYPQGYWAR 264
++ +PQ + +
Sbjct: 241 LETNFPQSPFLQ 252
>gi|269140176|ref|YP_003296877.1| lipoprotein [Edwardsiella tarda EIB202]
gi|267985836|gb|ACY85665.1| lipoprotein [Edwardsiella tarda EIB202]
gi|304560009|gb|ADM42673.1| Putative lipoprotein assembly complex component [Edwardsiella tarda
FL6-60]
Length = 245
Score = 96.8 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 58/248 (23%), Positives = 100/248 (40%), Gaps = 17/248 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + + + LVG E+Y A L++ NF A
Sbjct: 1 MTRIKYLVAATTLSLALVGCSSS-------KEAVPDNPPAEIYATAQQKLQDGNFKAAIT 53
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+PF +++ L + Y + A + + +I P S+N+ YV Y+ G
Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKSADLPMAQATIDRFIRLNPTSQNMPYVLYMRG 113
Query: 139 MSYAQMIR----------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
++ M D + + S++V+RY NS Y A + +N+
Sbjct: 114 LTDMAMDDSALQGFFGIDRSDRDPEHARQAFRDFSQLVQRYPNSAYTTDATKRLLFLKNR 173
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
LA E+ + R+Y KRG YVA + R + +L NY D + +A+ + AY + L EA +
Sbjct: 174 LAKHELAVARFYTKRGAYVAVVNRVEQMLRNYPDTQATRDALPLMENAYRQMGLNGEADK 233
Query: 249 VVSLIQER 256
V +I
Sbjct: 234 VQKIIAFN 241
>gi|187929000|ref|YP_001899487.1| outer membrane assembly lipoprotein YfiO [Ralstonia pickettii 12J]
gi|187725890|gb|ACD27055.1| outer membrane assembly lipoprotein YfiO [Ralstonia pickettii 12J]
Length = 258
Score = 96.8 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 56/249 (22%), Positives = 106/249 (42%), Gaps = 14/249 (5%)
Query: 30 IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89
+A + + T ++Y +A L +++KA +Y+ + +PF
Sbjct: 4 VACLAISACGILPEQQ----DETAGWSANKLYSEAKDSLDGGDYAKAVKYYEKLESRYPF 59
Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
A+++ + +A+ Y G+ A + + +I +P +VDY YYL G+
Sbjct: 60 GQYAQQAQIETAYANYKDGETAAALAAVDRFIQLHPNHPSVDYAYYLKGLINFNDNLGWL 119
Query: 150 YDQRAT----------KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
+ ++ R+ NS Y A + N +A EV RY
Sbjct: 120 GRFSNQDLSERDPKAARAAYDAFKTLITRFPNSKYTPDATQRMQYIVNAMAEHEVGAARY 179
Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
Y +RG Y+AA+ R Q + +Y A EEA+ ++++Y AL + D + +I++ YP+
Sbjct: 180 YYRRGAYLAAVNRAQDAIKDYDRAPAVEEALYIMMKSYEALGMKDMRDDTERIIKQNYPK 239
Query: 260 GYWARYVET 268
+ Y +
Sbjct: 240 SDFLAYGQR 248
>gi|225076528|ref|ZP_03719727.1| hypothetical protein NEIFLAOT_01576 [Neisseria flavescens
NRL30031/H210]
gi|224952207|gb|EEG33416.1| hypothetical protein NEIFLAOT_01576 [Neisseria flavescens
NRL30031/H210]
Length = 267
Score = 96.8 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 54/252 (21%), Positives = 105/252 (41%), Gaps = 10/252 (3%)
Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
I +++ + +T ++Y +A L N+++A + +
Sbjct: 1 MKKILLVVSLGLALSACANKGTIDKDAQITQDWSVEKLYAEAQDELNSNNYTRAVKLYEI 60
Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY---------- 132
FP A++S L +A+ Y + ++A + + +P+ N+DY
Sbjct: 61 LESRFPNGRYAQQSQLDTAYAYYKDDEPEKALAAIARFQRHHPQHPNMDYALYLKGLVLF 120
Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
++ D +A + Q + +V+RY NS Y A + + L
Sbjct: 121 NEDQSFLNKLASQDWSDRDPKANRDAYQAFAELVQRYPNSKYAADATERMAKLVDALGGN 180
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
E+ + RYY+KRG YVAA R Q +++ Y + + EEA+A + AY L A + +
Sbjct: 181 EISVARYYMKRGAYVAAANRAQKIVSRYQNTRYVEEALAMMELAYKKLDKPQLAADTRRV 240
Query: 253 IQERYPQGYWAR 264
++ +PQ + +
Sbjct: 241 LETNFPQSPFLQ 252
>gi|167625161|ref|YP_001675455.1| putative lipoprotein [Shewanella halifaxensis HAW-EB4]
gi|167355183|gb|ABZ77796.1| putative lipoprotein [Shewanella halifaxensis HAW-EB4]
Length = 268
Score = 96.4 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 52/252 (20%), Positives = 96/252 (38%), Gaps = 14/252 (5%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
++K A ++ + + D + +Y +A ++ N+SKA
Sbjct: 16 MHKIAKSVAVVLITLAATACSSKKGEDPQMTK----SSPEVLYSQARTSMELGNYSKAVR 71
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
FPF + L + Y + + +I P K++DYVYY+ G
Sbjct: 72 SLEALDSRFPFGPHKTQVQLDLIYAYYKLDDPASGIANIDRFIRLNPTHKDIDYVYYMRG 131
Query: 139 MSYAQMIRDVPYDQRATK----------LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
+ Q R + +D + R+++ Y NS Y A+ + +N+
Sbjct: 132 LVNMQSDRYLFHDMLNIDRSDRDPKAAQDAFKDFDRLIKSYPNSKYAADAQKRMQHLKNR 191
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
LA +++ YY+K + AA R Q VL Y AE+A+ + AY L
Sbjct: 192 LALYSIKVAEYYIKMNAWSAAAVRAQSVLETYPGTPSAEKALEIMSTAYGELGQEKLKDH 251
Query: 249 VVSLIQERYPQG 260
+ +++ +P
Sbjct: 252 ALMVMKANFPNN 263
>gi|212636675|ref|YP_002313200.1| hypothetical protein swp_3941 [Shewanella piezotolerans WP3]
gi|212558159|gb|ACJ30613.1| Conserved hypothetical protein [Shewanella piezotolerans WP3]
Length = 276
Score = 96.4 bits (237), Expect = 4e-18, Method: Composition-based stats.
Identities = 53/253 (20%), Positives = 96/253 (37%), Gaps = 14/253 (5%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
++K A ++ + + + D +Y +A ++ N+SKA
Sbjct: 23 MHKIAKSVAVVLISLAVTACSSKQGE----DPAMIKSSPEVLYSQARTSMELGNYSKAVR 78
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
FPF + L F Y + + +I P K++DYVYY+ G
Sbjct: 79 SLEALDSRFPFGPHKTQVQLDLIFAYYKLDDPASGIANIDRFIRLNPTHKDIDYVYYMRG 138
Query: 139 MSYAQMIRDVPYDQRATK----------LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
+ Q R + +D + R+V+ Y NS Y A+ + +N+
Sbjct: 139 LVNMQSDRYLFHDMLNIDRSDRDPKAAQDAFKDFDRLVKAYPNSKYAADAQKRMQHLKNR 198
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
LA +++ YY+K + AA R QLV+ + E A+ + +AY L
Sbjct: 199 LALYSIKVAEYYIKMNAWSAAAIRAQLVMEGFPGTPSTERALEIMSQAYGELGQDKLKEH 258
Query: 249 VVSLIQERYPQGY 261
+ ++Q +P
Sbjct: 259 TLMVMQANFPDNK 271
>gi|294634725|ref|ZP_06713256.1| competence lipoprotein ComL [Edwardsiella tarda ATCC 23685]
gi|291091855|gb|EFE24416.1| competence lipoprotein ComL [Edwardsiella tarda ATCC 23685]
Length = 245
Score = 96.4 bits (237), Expect = 4e-18, Method: Composition-based stats.
Identities = 60/248 (24%), Positives = 101/248 (40%), Gaps = 17/248 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + + + LVG E+Y A L++ NF A
Sbjct: 1 MTRIKYLVAATTLSLALVGCSSS-------KEAVPDNPPAEIYATAQQKLQDGNFKAAIT 53
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+PF +++ L + Y + A + + +I P S+N+ YV Y+ G
Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKSADLPMAQATIDRFIRLNPTSQNMPYVLYMRG 113
Query: 139 MSYAQMIR----------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
++ M D + + S++V+RY NS Y A + +N+
Sbjct: 114 LTDMAMDDSALQGFFGIDRSDRDPEHARQAFRDFSQLVQRYPNSQYSSDATKRLIFLKNR 173
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
LA E+ + R+Y KRG YVA + R + +L NY D + +A+ + AY L LM EA +
Sbjct: 174 LAKHELAVARFYTKRGAYVAVVNRVEQMLRNYPDTQATRDALPLMENAYRQLGLMSEAAK 233
Query: 249 VVSLIQER 256
V +I
Sbjct: 234 VQKIIAFN 241
>gi|59800727|ref|YP_207439.1| ComL [Neisseria gonorrhoeae FA 1090]
gi|194097999|ref|YP_002001047.1| ComL, competence lipoprotein [Neisseria gonorrhoeae NCCP11945]
gi|239998465|ref|ZP_04718389.1| ComL, competence lipoprotein [Neisseria gonorrhoeae 35/02]
gi|240013590|ref|ZP_04720503.1| ComL, competence lipoprotein [Neisseria gonorrhoeae DGI18]
gi|240016029|ref|ZP_04722569.1| ComL, competence lipoprotein [Neisseria gonorrhoeae FA6140]
gi|240080170|ref|ZP_04724713.1| ComL, competence lipoprotein [Neisseria gonorrhoeae FA19]
gi|240112384|ref|ZP_04726874.1| ComL, competence lipoprotein [Neisseria gonorrhoeae MS11]
gi|240115124|ref|ZP_04729186.1| ComL, competence lipoprotein [Neisseria gonorrhoeae PID18]
gi|240117407|ref|ZP_04731469.1| ComL, competence lipoprotein [Neisseria gonorrhoeae PID1]
gi|240120660|ref|ZP_04733622.1| ComL, competence lipoprotein [Neisseria gonorrhoeae PID24-1]
gi|240122964|ref|ZP_04735920.1| ComL, competence lipoprotein [Neisseria gonorrhoeae PID332]
gi|240125215|ref|ZP_04738101.1| ComL, competence lipoprotein [Neisseria gonorrhoeae SK-92-679]
gi|240127669|ref|ZP_04740330.1| ComL, competence lipoprotein [Neisseria gonorrhoeae SK-93-1035]
gi|254493185|ref|ZP_05106356.1| competence lipoprotein comL [Neisseria gonorrhoeae 1291]
gi|260441059|ref|ZP_05794875.1| ComL, competence lipoprotein [Neisseria gonorrhoeae DGI2]
gi|268594326|ref|ZP_06128493.1| peptidoglycan-linked lipoprotein [Neisseria gonorrhoeae 35/02]
gi|268596321|ref|ZP_06130488.1| peptidoglycan-linked lipoprotein [Neisseria gonorrhoeae FA19]
gi|268598445|ref|ZP_06132612.1| competence lipoprotein comL [Neisseria gonorrhoeae MS11]
gi|268600799|ref|ZP_06134966.1| competence lipoprotein comL [Neisseria gonorrhoeae PID18]
gi|268603104|ref|ZP_06137271.1| competence lipoprotein comL [Neisseria gonorrhoeae PID1]
gi|268681585|ref|ZP_06148447.1| competence lipoprotein comL [Neisseria gonorrhoeae PID332]
gi|268683813|ref|ZP_06150675.1| competence lipoprotein comL [Neisseria gonorrhoeae SK-92-679]
gi|268686055|ref|ZP_06152917.1| competence lipoprotein comL [Neisseria gonorrhoeae SK-93-1035]
gi|291044391|ref|ZP_06570100.1| peptidoglycan-linked lipoprotein [Neisseria gonorrhoeae DGI2]
gi|293399572|ref|ZP_06643725.1| lipoprotein [Neisseria gonorrhoeae F62]
gi|5921830|sp|Q50985|COML_NEIGO RecName: Full=Competence lipoprotein ComL; Flags: Precursor
gi|1107833|emb|CAA90076.1| ComL, competence lipoprotein [Neisseria gonorrhoeae]
gi|59717622|gb|AAW89027.1| competence lipoprotein [Neisseria gonorrhoeae FA 1090]
gi|193933289|gb|ACF29113.1| ComL, competence lipoprotein [Neisseria gonorrhoeae NCCP11945]
gi|226512225|gb|EEH61570.1| competence lipoprotein comL [Neisseria gonorrhoeae 1291]
gi|268547715|gb|EEZ43133.1| peptidoglycan-linked lipoprotein [Neisseria gonorrhoeae 35/02]
gi|268550109|gb|EEZ45128.1| peptidoglycan-linked lipoprotein [Neisseria gonorrhoeae FA19]
gi|268582576|gb|EEZ47252.1| competence lipoprotein comL [Neisseria gonorrhoeae MS11]
gi|268584930|gb|EEZ49606.1| competence lipoprotein comL [Neisseria gonorrhoeae PID18]
gi|268587235|gb|EEZ51911.1| competence lipoprotein comL [Neisseria gonorrhoeae PID1]
gi|268621869|gb|EEZ54269.1| competence lipoprotein comL [Neisseria gonorrhoeae PID332]
gi|268624097|gb|EEZ56497.1| competence lipoprotein comL [Neisseria gonorrhoeae SK-92-679]
gi|268626339|gb|EEZ58739.1| competence lipoprotein comL [Neisseria gonorrhoeae SK-93-1035]
gi|291011285|gb|EFE03281.1| peptidoglycan-linked lipoprotein [Neisseria gonorrhoeae DGI2]
gi|291610141|gb|EFF39263.1| lipoprotein [Neisseria gonorrhoeae F62]
gi|317163747|gb|ADV07288.1| ComL [Neisseria gonorrhoeae TCDC-NG08107]
gi|1588996|prf||2209423A lipoprotein
Length = 267
Score = 96.4 bits (237), Expect = 4e-18, Method: Composition-based stats.
Identities = 58/258 (22%), Positives = 112/258 (43%), Gaps = 14/258 (5%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K LT+ +A L Q + D +T ++Y +A L N+++A +
Sbjct: 1 MKKILLTVSLGLA---LSACATQGTADKDA-QITQDWSVEKLYAEAQDELNSSNYTRAVK 56
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY------ 132
+ FP + AR+S L +A+ Y + +A + E + +P+ N+DY
Sbjct: 57 LYEILESRFPTSRHARQSQLDTAYAYYKDDEKDKALAAIERFRRLHPQHPNMDYALYLRG 116
Query: 133 ----VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
++ D +A + Q + +V+R+ NS Y A + +
Sbjct: 117 LVLFNEDQSFLNKLASQDWSDRDPKANREAYQAFAELVQRFPNSKYAADATARMVKLVDA 176
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
L E+ + RYY+KRG Y+AA R + ++ +Y + + EE++A L AY L A +
Sbjct: 177 LGGNEMSVARYYMKRGAYIAAANRAKKIIGSYQNTRYVEESLAILELAYKKLDKPQLAAD 236
Query: 249 VVSLIQERYPQGYWARYV 266
+++ +P+ + +
Sbjct: 237 TRRVLETNFPKSPFLTHA 254
>gi|224825455|ref|ZP_03698560.1| outer membrane assembly lipoprotein YfiO [Lutiella nitroferrum
2002]
gi|224602376|gb|EEG08554.1| outer membrane assembly lipoprotein YfiO [Lutiella nitroferrum
2002]
Length = 256
Score = 96.4 bits (237), Expect = 4e-18, Method: Composition-based stats.
Identities = 59/247 (23%), Positives = 101/247 (40%), Gaps = 15/247 (6%)
Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
+ L G T ++Y +A L N+++A + + FP
Sbjct: 1 MLVALSLAGCASNEP-----YDETRSWTVEKLYAEARDELNSGNYTRAVKLYETLEARFP 55
Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY------- 141
+ A++S + A+ Y + + A + + +I +P N+DYV YL G+ Y
Sbjct: 56 YGRYAQQSEMDLAYTHYKDNEPELAIAAADRFIKLHPTHPNLDYVLYLKGLVYYNDDSGL 115
Query: 142 ---AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
D RAT+ + R+ NS Y A + L E+ + R
Sbjct: 116 LAKWAGQDMSERDPRATREAFLAFRELTSRFPNSQYSADAAEKMNKLIKALGGHEMHVAR 175
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
YY+KRG Y+AA R Q V+ Y++ + EEA+A V AY L + + +++ YP
Sbjct: 176 YYMKRGAYLAAAGRAQNVVKEYANTGYLEEALALTVTAYDKLGMPQLRDDARRVLELNYP 235
Query: 259 QGYWARY 265
+ +
Sbjct: 236 KSQYLAK 242
>gi|91775966|ref|YP_545722.1| putative competence lipoprotein precursor [Methylobacillus
flagellatus KT]
gi|91709953|gb|ABE49881.1| putative competence lipoprotein precursor [Methylobacillus
flagellatus KT]
Length = 267
Score = 96.4 bits (237), Expect = 4e-18, Method: Composition-based stats.
Identities = 63/241 (26%), Positives = 105/241 (43%), Gaps = 11/241 (4%)
Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
IAV +L G + + T + +Y AV + +++ KA +YF +P
Sbjct: 7 LIAVLWLTGCAIFGAPTELDE--TKGWPVQRIYAAAVENMTTRDYEKAIKYFQILESRYP 64
Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV---------GM 139
A +S L + Y + + +I +P NVDY YY+ +
Sbjct: 65 HGRYATQSQLEVIYAHYKKNDPAATMAAADRFIKLHPNHPNVDYAYYMKGLATFNERGII 124
Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
+ D ++ + + +V R+ NS YVK A ++ N LA E+ + RY
Sbjct: 125 EKLTKQQISDRDPKSLRESFLALKELVNRFPNSRYVKDATLRMSYLVNSLAQHELHVARY 184
Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
Y+KR YVAA R + V+ Y D H EEA+ L+ AY A+++ D + ++ + YP
Sbjct: 185 YMKRQAYVAAANRCKYVMEFYPDTPHIEEALVILISAYDAMSMDDLRDDAKRVLAQNYPN 244
Query: 260 G 260
Sbjct: 245 S 245
>gi|71898900|ref|ZP_00681067.1| putative lipoprotein [Xylella fastidiosa Ann-1]
gi|71731312|gb|EAO33376.1| putative lipoprotein [Xylella fastidiosa Ann-1]
Length = 292
Score = 96.0 bits (236), Expect = 5e-18, Method: Composition-based stats.
Identities = 63/251 (25%), Positives = 108/251 (43%), Gaps = 15/251 (5%)
Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
L + G R++ ++ D +Y+KA +K+ N++ A F +
Sbjct: 13 LLAVLLATFILITGCHRETKKN-----ADDGMPVEHLYDKAHTLMKKGNWAGAEVSFKRL 67
Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
+P+ ++++ +A+ QY +GK+ A S + +I YP N+ Y+YYL G+S +
Sbjct: 68 IAQYPYGPYTEQAMVENAYAQYKSGKHDDAVSSIDRFIRTYPTHHNIPYMYYLRGLSNSN 127
Query: 144 MIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
D A + +++RY NS Y A+ +T RN A E
Sbjct: 128 RDTIFLRKVWSLDLSRRDLSAPQQAYNDFKTVLDRYPNSRYAADAKKQMTELRNMFAQYE 187
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+ + YYL+R +VAA R +L Y + +A+A L EAY L A ++
Sbjct: 188 MNVILYYLRRTAWVAAAGRANFLLETYPQSAFQYDAVAALGEAYTHLGNKTLADNARQVL 247
Query: 254 QERYPQGYWAR 264
Q P W +
Sbjct: 248 QTNAPDHPWLK 258
>gi|171463621|ref|YP_001797734.1| putative transmembrane protein [Polynucleobacter necessarius subsp.
necessarius STIR1]
gi|171193159|gb|ACB44120.1| putative transmembrane protein [Polynucleobacter necessarius subsp.
necessarius STIR1]
Length = 295
Score = 96.0 bits (236), Expect = 5e-18, Method: Composition-based stats.
Identities = 61/245 (24%), Positives = 109/245 (44%), Gaps = 14/245 (5%)
Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
G TD+ + ++Y +A L + +F+K +YF + FPF ++++
Sbjct: 45 GCAGSDGNK----DDTDIWSEAKLYSEATDKLNDADFAKCGKYFEKLEARFPFGPYSQQA 100
Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV-------- 148
+ +A+ + A + QA + +I + S N+DY YYL G+
Sbjct: 101 QINAAYCYWKAQEQTQALVAIDRFIKLHQGSPNLDYAYYLKGLITFNDDLGWLGKFTGQD 160
Query: 149 --PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
D +A K + +VER+ NS Y A + N LA +V + R+Y +RG Y
Sbjct: 161 LSERDPKAAKEAFESFKVVVERFPNSKYTPDAIDRMRYIVNSLAEADVIVARFYYQRGAY 220
Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
+AA R QLV+ +Y A EEA+ L ++Y L + +++ + + +P
Sbjct: 221 LAAANRAQLVIRDYDRAPAVEEALYILTKSYEKLGMTQLSKDSARVFKLNFPDSDMLETG 280
Query: 267 ETLVK 271
+ + K
Sbjct: 281 QRVKK 285
>gi|332184382|gb|AEE26636.1| Competence protein [Francisella cf. novicida 3523]
Length = 274
Score = 96.0 bits (236), Expect = 5e-18, Method: Composition-based stats.
Identities = 57/256 (22%), Positives = 106/256 (41%), Gaps = 12/256 (4%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ +F I + + L +D L V +Y KA ++ + + A
Sbjct: 1 MKRFLYLIVITFMLLLLSSCG--PKKDSELPQVYTGYTASFIYAKAHEQMRNEKYFDAIR 58
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV- 137
+ +PF +A K ++ +V Y + A +LG+++I YP S YVYY++
Sbjct: 59 SYKSLVAQYPFTPLAEKGMVDLIYVYYMDDESTMALALGQQFIKMYPYSIYKGYVYYMIG 118
Query: 138 ---------GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
+ +D + R ++ N +V A+ + N
Sbjct: 119 VVGFEDGRGMLQTYAPYDMNYHDPTGYQDAYTNFERAIQLDPNGSFVPDAKRRMVFINNT 178
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
+A +I +Y KRG Y AAI R V+ NY + E+A+ + AY L L D+A+
Sbjct: 179 IARHYDDIAHFYFKRGAYNAAIDRASQVIRNYPQSTSTEDALVLTIRAYNKLGLYDQAKA 238
Query: 249 VVSLIQERYPQGYWAR 264
+ ++++ YP+ + +
Sbjct: 239 NIRVLKKNYPKNKFIK 254
>gi|254785220|ref|YP_003072648.1| outer membrane assembly lipoprotein YfiO [Teredinibacter turnerae
T7901]
gi|237686542|gb|ACR13806.1| outer membrane assembly lipoprotein YfiO [Teredinibacter turnerae
T7901]
Length = 301
Score = 95.6 bits (235), Expect = 6e-18, Method: Composition-based stats.
Identities = 55/256 (21%), Positives = 105/256 (41%), Gaps = 16/256 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K I A VG + ++ Y A +L+ N+S A E
Sbjct: 1 MIKHPAVIALVTAALLTVGCSSNDDK-------LAQSSEQVTYNLAQKYLRSSNWSAAIE 53
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+FPF A ++ L + + +Y A + + ++ +P+ +NVDY +Y+ G
Sbjct: 54 ALEVMEENFPFGSYAEQAQLELIYAYFRGNEYDAAIASADRFVRLHPQHRNVDYAFYMRG 113
Query: 139 MSYAQMIRDVPYDQRAT---------KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
++ K Y +++++RY +SPY A+ + RN L
Sbjct: 114 IAAFHNDTAFYSMLPTDITQRDAGTAKDSFDYFAQLIDRYPDSPYALDAQKRMIYLRNML 173
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
A E+ + YY KR Y+AA R + V+ N+ + +A + +AY L + D ++
Sbjct: 174 ARYEIHVANYYFKRSAYLAAANRGRYVVENFEGTPAVPDGLAVMAQAYQMLGMDDYSKSA 233
Query: 250 VSLIQERYPQGYWARY 265
++ + +P +
Sbjct: 234 EKVLVKNFPNHPALKD 249
>gi|319638103|ref|ZP_07992867.1| competence lipoprotein comL [Neisseria mucosa C102]
gi|317400748|gb|EFV81405.1| competence lipoprotein comL [Neisseria mucosa C102]
Length = 267
Score = 95.6 bits (235), Expect = 6e-18, Method: Composition-based stats.
Identities = 54/252 (21%), Positives = 105/252 (41%), Gaps = 10/252 (3%)
Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
I +++ + +T ++Y +A L N+++A + +
Sbjct: 1 MKKILLVVSLGLALSACANKGTIDKDAQITQDWSVEKLYAEAQDELNSNNYTRAVKLYEI 60
Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY---------- 132
FP A++S L +A+ Y + ++A + + +P+ N+DY
Sbjct: 61 LESRFPNGRYAQQSQLDTAYAYYKDDEPEKALAAIARFQRHHPQHPNMDYALYLKGLVLF 120
Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
++ D +A + Q + +V+RY NS Y A + + L
Sbjct: 121 NEDQSFLNKLASQDWSDRDPKANRDAYQAFAELVQRYPNSKYAADATERMAKLVDALGGN 180
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
E+ + RYY+KRG YVAA R Q +++ Y + + EEA+A + AY L A + +
Sbjct: 181 EMSVARYYMKRGAYVAAANRAQKIVSRYQNTRYVEEALAMMELAYKKLDKPQLAADTHRV 240
Query: 253 IQERYPQGYWAR 264
++ +PQ + +
Sbjct: 241 LETNFPQSPFLQ 252
>gi|237653788|ref|YP_002890102.1| outer membrane assembly lipoprotein YfiO [Thauera sp. MZ1T]
gi|237625035|gb|ACR01725.1| outer membrane assembly lipoprotein YfiO [Thauera sp. MZ1T]
Length = 269
Score = 95.6 bits (235), Expect = 7e-18, Method: Composition-based stats.
Identities = 57/225 (25%), Positives = 98/225 (43%), Gaps = 10/225 (4%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
T +++Y +A + E + +A F + +P+ A+++ L A+ Y G+
Sbjct: 32 DETAGWNAQKLYSEAKASMSEGGYDRAVTLFEKLEARYPYGRFAQQAQLEVAYAYYKQGE 91
Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ----------MIRDVPYDQRATKLML 159
A + + +I +P NVDY YYL G+ D + +
Sbjct: 92 QALALAAADRFIKLHPNHPNVDYAYYLKGLVNFNEDLGLLAGLSRQDLSERDPKGAREAF 151
Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219
+VER+ S Y +R + N LA+ EV + RYY RG YVAAI R Q + N
Sbjct: 152 DSFRELVERFPESRYADDSRARMQYLINSLASHEVHVSRYYYNRGAYVAAINRAQTAVNN 211
Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
+ A EEA+ +V +Y L + + ++++ +P + R
Sbjct: 212 FPQAPAIEEALFLMVMSYDKLGMAQLRDDADRVMRKNFPDSVYFR 256
Score = 37.5 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 17/91 (18%), Positives = 27/91 (29%)
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
V A K + + G Y A+ F+ + A Y A++A + AY
Sbjct: 28 PEQVDETAGWNAQKLYSEAKASMSEGGYDRAVTLFEKLEARYPYGRFAQQAQLEVAYAYY 87
Query: 239 ALALMDEAREVVSLIQERYPQGYWARYVETL 269
A + +P Y L
Sbjct: 88 KQGEQALALAAADRFIKLHPNHPNVDYAYYL 118
>gi|74316827|ref|YP_314567.1| putative competence lipoprotein [Thiobacillus denitrificans ATCC
25259]
gi|74056322|gb|AAZ96762.1| putative competence lipoprotein precursor [Thiobacillus
denitrificans ATCC 25259]
Length = 281
Score = 95.6 bits (235), Expect = 7e-18, Method: Composition-based stats.
Identities = 59/228 (25%), Positives = 97/228 (42%), Gaps = 10/228 (4%)
Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106
+ T +++Y +A L E N+ +A + F +PF A+++ L A+ Y
Sbjct: 41 EVKDETTGWSAQKLYAEAKDNLNEGNYERAVKLFETLESRYPFGRYAQQAQLEVAYAYYK 100
Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATK 156
+ A + + +I +P NVDY YYL G++ D RA +
Sbjct: 101 DNEPISAVAACDRFIKLHPNHPNVDYAYYLKGLANFNDDLGLLGNLVDQDMSERDPRAAR 160
Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
+ R+ S Y A + N LA EV + +YYLKR YVAA R + V
Sbjct: 161 DAFLAFKELATRFPQSIYAADATARMKYLVNALANNEVHVAKYYLKRKAYVAAANRAKEV 220
Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
L Y +A EEA+A + +Y L L + + ++ +P + +
Sbjct: 221 LKTYPEAPALEEALAIMALSYDRLKLPELRDDARRVLTLNFPNSKYLQ 268
>gi|322831461|ref|YP_004211488.1| outer membrane assembly lipoprotein YfiO [Rahnella sp. Y9602]
gi|321166662|gb|ADW72361.1| outer membrane assembly lipoprotein YfiO [Rahnella sp. Y9602]
Length = 244
Score = 95.6 bits (235), Expect = 7e-18, Method: Composition-based stats.
Identities = 51/248 (20%), Positives = 97/248 (39%), Gaps = 17/248 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + + + LVG +Y A L++ NF A
Sbjct: 1 MTRVKYLVAAATLSLALVGCSSS-------KETVPDNPPNVLYATAQQKLQDGNFKGAIA 53
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+PF +++ L + Y + A + + ++ P N+DYV Y+ G
Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKSADLPMAQASIDRFMRLNPTHPNIDYVMYMRG 113
Query: 139 MSYAQMIR----------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
++ + D + + + S+++ Y NS Y A + +++
Sbjct: 114 LTDMALDDSALQGFFGVDRSDRDPQHARAAFRDFSQLIHTYPNSQYATDATKRLVFLKDR 173
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
LA E+ + +YY KRG YVA + R + +L +Y D + +A+ + AY L L +A +
Sbjct: 174 LAKYELSVVQYYTKRGAYVAVVNRVEQMLKDYPDTKATHDALPLMENAYRELQLNTQADK 233
Query: 249 VVSLIQER 256
V +I
Sbjct: 234 VAKIIAAN 241
>gi|93005954|ref|YP_580391.1| putative lipoprotein (DUF0169) [Psychrobacter cryohalolentis K5]
gi|92393632|gb|ABE74907.1| putative lipoprotein (DUF0169) [Psychrobacter cryohalolentis K5]
Length = 359
Score = 95.6 bits (235), Expect = 7e-18, Method: Composition-based stats.
Identities = 66/252 (26%), Positives = 112/252 (44%), Gaps = 12/252 (4%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSS---RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76
+ +I LVG + + VT + ++ Y A+ + + +++A
Sbjct: 8 FIKLSSITLLALSVNLVGCQTFKNLTGGKDVDAVVTAEKSEQAYYNDAIAQIDKGRYTQA 67
Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
E +P A +SLL + QY++GKY+ AA+ E++I YP + V Y YY+
Sbjct: 68 IEDLTNLRTFYPTGQYAEQSLLDMMYAQYASGKYETAAASAEQFIRLYPSNPQVSYAYYV 127
Query: 137 VGMSYAQ---------MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
G++ Q + D ++ ++ +Y NSPY A +T N
Sbjct: 128 RGVANMQGSSEGLKLFKLNQAERDTAYYRIAFANFQELLNKYPNSPYAPDAAQRMTFIYN 187
Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
Q A E+ +Y++R YVAA+ R + V Y +E +A+A L ++ L L D A
Sbjct: 188 QFAESEMSAANWYIEREAYVAAVNRAKWVFQYYPLSESVPDAIAVLAYSHEKLGLTDLAN 247
Query: 248 EVVSLIQERYPQ 259
E +L+Q YP
Sbjct: 248 EYKTLLQINYPN 259
Score = 36.3 bits (81), Expect = 4.6, Method: Composition-based stats.
Identities = 13/81 (16%), Positives = 25/81 (30%)
Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
+ + +G Y AI + Y ++AE+++ ++ A A + A
Sbjct: 45 EKSEQAYYNDAIAQIDKGRYTQAIEDLTNLRTFYPTGQYAEQSLLDMMYAQYASGKYETA 104
Query: 247 REVVSLIQERYPQGYWARYVE 267
YP Y
Sbjct: 105 AASAEQFIRLYPSNPQVSYAY 125
>gi|134301740|ref|YP_001121708.1| lipoprotein [Francisella tularensis subsp. tularensis WY96-3418]
gi|134049517|gb|ABO46588.1| hypothetical lipoprotein [Francisella tularensis subsp. tularensis
WY96-3418]
Length = 274
Score = 95.6 bits (235), Expect = 7e-18, Method: Composition-based stats.
Identities = 55/256 (21%), Positives = 105/256 (41%), Gaps = 12/256 (4%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ +F I + + L +D L V +Y KA ++ Q + A
Sbjct: 1 MKRFLYLIIITFMLLLLSSCG--PKKDSELPQVYTGYTASFIYAKAHEQMQNQKYFDAIR 58
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV- 137
+ +PF +A K ++ +V Y + A +LG+++I +P S YVYY++
Sbjct: 59 SYKSLVAQYPFTPLAEKGMVDLIYVYYMDDESTMALALGQQFIKMHPYSIYKGYVYYMIG 118
Query: 138 ---------GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
+ +D + + ++ +V A+ + N
Sbjct: 119 VVGFEDGRGMLQTYAPYDMNYHDPTGYQDAYTNFEKAIQLDPTGSFVPDAKRRMIFINNI 178
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
+A +I +Y KRG Y AAI R V+ NY + E+A+ + AY L L D+A+
Sbjct: 179 IARHYDDIAHFYFKRGAYNAAIDRASQVIRNYPQSTSTEDALVLTIRAYNKLGLYDQAKA 238
Query: 249 VVSLIQERYPQGYWAR 264
+ ++++ YP+ + +
Sbjct: 239 NIRVLKKNYPKNKFIK 254
>gi|254248089|ref|ZP_04941410.1| Competence lipoprotein ComL [Burkholderia cenocepacia PC184]
gi|124872865|gb|EAY64581.1| Competence lipoprotein ComL [Burkholderia cenocepacia PC184]
Length = 309
Score = 95.6 bits (235), Expect = 7e-18, Method: Composition-based stats.
Identities = 53/239 (22%), Positives = 96/239 (40%), Gaps = 14/239 (5%)
Query: 34 FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93
+ G + T ++Y +A L ++ K +YF PF A
Sbjct: 59 LIAGCHGLPQKQ----DETATWSNNKLYSEAQDALSGGDWGKCAKYFESLQGRDPFGHFA 114
Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM--------- 144
+++ + A+ + + A + +I +P+ ++ Y YYL GM +
Sbjct: 115 QQAQINVAYCNWKDNEAAAADQAVDRFIQLHPDHPDIPYAYYLKGMIHFNDDLGLFGRFS 174
Query: 145 -IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
D +A + +V+R+ S Y A + N LA+ EV YY +R
Sbjct: 175 GQDMSERDPQALRESYDAFKVVVDRFPKSKYAPDAAARMRYIVNALASHEVHAADYYYRR 234
Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
G YVAAI R QL + +Y A E+A+ ++ +Y L + A + ++ +P +
Sbjct: 235 GAYVAAINRAQLAIKDYKGAPAIEDALHIMILSYGKLNQPELAEDTKRVLAGTFPDSPY 293
>gi|313496997|gb|ADR58363.1| DNA uptake lipoprotein-like protein [Pseudomonas putida BIRD-1]
Length = 339
Score = 95.6 bits (235), Expect = 7e-18, Method: Composition-based stats.
Identities = 56/249 (22%), Positives = 99/249 (39%), Gaps = 16/249 (6%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
+ + + + E+Y++A L +++ A
Sbjct: 1 MRVKHLLLIAILGLTAACSSNKEVI------DENLSEAELYQQAQADLDNSSYTSAVNKL 54
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
+PF A ++ L + Y + + A S E +I +P+ NVDY YYL G++
Sbjct: 55 KALESRYPFGRYADQAQLELIYANYKNSEPEAAKSAAERFIRLHPQHPNVDYAYYLKGLT 114
Query: 141 YAQMIR----------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
R D A + +++ R+ NS Y A+ + RN LA
Sbjct: 115 SFDQDRGLLARFLPLDMTKRDPGAARDSYNEFAQLTSRFPNSRYAPDAKQRMIYLRNLLA 174
Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
+ E+ + YYL R YVAA R + V+ N+ + + +A +VE+Y L L + A +
Sbjct: 175 SYEIHVADYYLSRQAYVAAANRGRYVVENFQETPSVGDGLAVMVESYQKLHLDELAATSL 234
Query: 251 SLIQERYPQ 259
++ YP
Sbjct: 235 ETLKLNYPD 243
>gi|309782613|ref|ZP_07677335.1| competence lipoprotein ComL [Ralstonia sp. 5_7_47FAA]
gi|308918588|gb|EFP64263.1| competence lipoprotein ComL [Ralstonia sp. 5_7_47FAA]
Length = 258
Score = 95.2 bits (234), Expect = 7e-18, Method: Composition-based stats.
Identities = 56/249 (22%), Positives = 105/249 (42%), Gaps = 14/249 (5%)
Query: 30 IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89
+A + + T ++Y +A L +++KA +Y+ + +PF
Sbjct: 4 VACLAISACGILPEQQ----DETAGWSANKLYSEAKDSLDGGDYAKAVKYYEKLESRYPF 59
Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
A+++ + +A+ Y G+ A + + +I +P +VDY YYL G+
Sbjct: 60 GQYAQQAQIETAYANYKDGETAAALAAVDRFIQLHPNHPSVDYAYYLNGLINFNDNLGWL 119
Query: 150 YDQRAT----------KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
+ + R+ NS Y A + N +A EV RY
Sbjct: 120 GRFSNQDLSERDPKAARAAYDAFKTLFTRFPNSKYTPDATQRMQYIVNAMAEHEVGAARY 179
Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
Y +RG Y+AA+ R Q + +Y A EEA+ ++++Y AL + D + +I++ YP+
Sbjct: 180 YYRRGAYLAAVNRAQDAIKDYDRAPAVEEALYIMMKSYEALGMKDMRDDTERIIKQNYPK 239
Query: 260 GYWARYVET 268
+ Y +
Sbjct: 240 SDFLAYGQR 248
>gi|148545912|ref|YP_001266014.1| DNA uptake lipoprotein-like protein [Pseudomonas putida F1]
gi|148509970|gb|ABQ76830.1| DNA uptake lipoprotein-like protein [Pseudomonas putida F1]
Length = 339
Score = 95.2 bits (234), Expect = 8e-18, Method: Composition-based stats.
Identities = 56/249 (22%), Positives = 99/249 (39%), Gaps = 16/249 (6%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
+ + + + E+Y++A L +++ A
Sbjct: 1 MRVKHLLLIAILGLTAACSSNKEVI------DENLSEAELYQQAQADLDNSSYTSAVNKL 54
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
+PF A ++ L + Y + + A S E +I +P+ NVDY YYL G++
Sbjct: 55 KALESRYPFGRYADQAQLELIYANYKNAEPEAAKSAAERFIRLHPQHPNVDYAYYLKGLT 114
Query: 141 YAQMIR----------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
R D A + +++ R+ NS Y A+ + RN LA
Sbjct: 115 SFDQDRGLLARFLPLDMTKRDPGAARDSYNEFAQLTSRFPNSRYAPDAKQRMIYLRNLLA 174
Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
+ E+ + YYL R YVAA R + V+ N+ + + +A +VE+Y L L + A +
Sbjct: 175 SYEIHVADYYLSRQAYVAAANRGRYVVENFQETPSVGDGLAVMVESYQKLHLDELAATSL 234
Query: 251 SLIQERYPQ 259
++ YP
Sbjct: 235 ETLKLNYPD 243
>gi|26987359|ref|NP_742784.1| competence lipoprotein ComL, putative [Pseudomonas putida KT2440]
gi|24982012|gb|AAN66248.1|AE016253_3 competence lipoprotein ComL, putative [Pseudomonas putida KT2440]
Length = 339
Score = 95.2 bits (234), Expect = 8e-18, Method: Composition-based stats.
Identities = 56/249 (22%), Positives = 99/249 (39%), Gaps = 16/249 (6%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
+ + + + E+Y++A L +++ A
Sbjct: 1 MRVKHLLLIAILGLTAACSSNKEVI------DENLSEAELYQQAQADLDNSSYTSAVNKL 54
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
+PF A ++ L + Y + + A S E +I +P+ NVDY YYL G++
Sbjct: 55 KALESRYPFGRYADQAQLELIYANYKNSEPEAAKSAAERFIRLHPQHPNVDYAYYLKGLT 114
Query: 141 YAQMIR----------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
R D A + +++ R+ NS Y A+ + RN LA
Sbjct: 115 SFDQDRGLLARFLPLDMTKRDPGAARDSYNEFAQLTSRFPNSRYAPDAKQRMIYLRNLLA 174
Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
+ E+ + YYL R YVAA R + V+ N+ + + +A +VE+Y L L + A +
Sbjct: 175 SYEIHVADYYLSRQAYVAAANRGRYVVENFQETPSVGDGLAVMVESYQKLHLDELAATSL 234
Query: 251 SLIQERYPQ 259
++ YP
Sbjct: 235 ETLKLNYPD 243
>gi|15837540|ref|NP_298228.1| hypothetical protein XF0938 [Xylella fastidiosa 9a5c]
gi|9105861|gb|AAF83748.1|AE003932_12 conserved hypothetical protein [Xylella fastidiosa 9a5c]
Length = 297
Score = 95.2 bits (234), Expect = 8e-18, Method: Composition-based stats.
Identities = 63/251 (25%), Positives = 108/251 (43%), Gaps = 15/251 (5%)
Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
L + G R++ ++ D +Y+KA +K+ N++ A F +
Sbjct: 18 LLAMLLATFVLITGCHREAKKN-----ADDGMPVEHLYDKAHTLMKKGNWAGAEVSFKRL 72
Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
+P+ ++++ +A+ QY +GK+ A S + +I YP N+ Y+YYL G+S +
Sbjct: 73 IAQYPYGPYTEQAMVENAYAQYKSGKHDDAVSSIDRFIRTYPTHHNIPYLYYLRGLSNSN 132
Query: 144 MIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
D A + +++RY NS Y A+ +T RN A E
Sbjct: 133 RDTIFLRKVWSLDLSRRDLSAPQQAYNDFKTVLDRYPNSRYAADAKKQMTELRNMFAQYE 192
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+ + YYL+R +VAA R +L Y + +A+A L EAY L A ++
Sbjct: 193 MNVTLYYLRRTAWVAAAGRANFLLETYPQSAFQYDAVAALGEAYTHLGNKTLADNARQVL 252
Query: 254 QERYPQGYWAR 264
Q P W +
Sbjct: 253 QTNAPDHPWLK 263
>gi|58581219|ref|YP_200235.1| competence lipoprotein [Xanthomonas oryzae pv. oryzae KACC10331]
gi|84623137|ref|YP_450509.1| competence lipoprotein [Xanthomonas oryzae pv. oryzae MAFF 311018]
gi|58425813|gb|AAW74850.1| competence lipoprotein [Xanthomonas oryzae pv. oryzae KACC10331]
gi|84367077|dbj|BAE68235.1| competence lipoprotein [Xanthomonas oryzae pv. oryzae MAFF 311018]
Length = 293
Score = 95.2 bits (234), Expect = 9e-18, Method: Composition-based stats.
Identities = 56/249 (22%), Positives = 105/249 (42%), Gaps = 14/249 (5%)
Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
L + + G R + + ++Y KA +++ N++ A F
Sbjct: 13 LIALMLVMAFVVTGCHRGAKDKN----PDEGMPVEQLYGKAHNLMEKGNWAGAEASFKHL 68
Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
+P+ ++++ SA+ QY AGK+ S + +I YP +N+ Y+YYL G++ +
Sbjct: 69 IAQYPYGPYTEQAMIESAYAQYKAGKHDDTVSSVDRFIRTYPTHRNIAYLYYLRGLANSN 128
Query: 144 MIRDVPYDQ----------RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
+ + + + +RY NS Y AR + R+ A E
Sbjct: 129 RDTVFLRHVWSLDPSRRDLSSPQQAYNDFNTVTDRYPNSRYAADARKRMIELRDVFAQHE 188
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
++ YYL+R +V+A R +L Y + + +A+A L EAY L A + ++
Sbjct: 189 LDNALYYLRRDAWVSAAGRANYLLETYPQSAYQYDAVAVLAEAYTHLGNKTLAADARRVL 248
Query: 254 QERYPQGYW 262
+ P+ W
Sbjct: 249 ELNDPKHPW 257
>gi|319786172|ref|YP_004145647.1| outer membrane assembly lipoprotein YfiO [Pseudoxanthomonas
suwonensis 11-1]
gi|317464684|gb|ADV26416.1| outer membrane assembly lipoprotein YfiO [Pseudoxanthomonas
suwonensis 11-1]
Length = 297
Score = 95.2 bits (234), Expect = 9e-18, Method: Composition-based stats.
Identities = 62/253 (24%), Positives = 118/253 (46%), Gaps = 19/253 (7%)
Query: 34 FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93
F G R + + R E+YEK +++ N++ A F + +P+
Sbjct: 29 FATGCGRDKKKK----DADEGRPVAELYEKGHGYMERGNWTGAETVFRRLVAQYPYGPYT 84
Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ- 152
++L+ +A+ QY AG++ +A S + +I YP +N+ Y YYL G+S +
Sbjct: 85 EQALMETAYAQYKAGRHDEAVSTIDRFIRTYPTHRNIAYFYYLRGLSNSNRDAVFMQRVW 144
Query: 153 ---------RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
+ + + + + +RY NS Y AR + V RN A E++I YY++R
Sbjct: 145 SLDPSRRDLSSPQQAYEDFNTVAQRYPNSRYAPDARQRMVVLRNVFARHEMDIALYYMRR 204
Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP----- 258
G +++A+ R + +L Y +++ +A+A L E+Y L + + + +++ P
Sbjct: 205 GAWLSAVSRAKYILETYPQSDYQYDAIAALAESYDNLGQKQLSEDAIRVLRLNDPQHPYL 264
Query: 259 QGYWARYVETLVK 271
G W +Y + K
Sbjct: 265 SGDWPKYPWAIRK 277
>gi|317401791|gb|EFV82406.1| competence lipoprotein [Achromobacter xylosoxidans C54]
Length = 262
Score = 95.2 bits (234), Expect = 9e-18, Method: Composition-based stats.
Identities = 55/250 (22%), Positives = 98/250 (39%), Gaps = 14/250 (5%)
Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
+ AV + G +S+ T ++Y A + + +A E
Sbjct: 1 MRVVIALFAVIAIAGCGSTNSK----YDKTTNWSAEQLYADAKAEISSGGWKEARERLTA 56
Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
+PF A+++LL A+V + G+ +QA + + + YP DY YL G+
Sbjct: 57 IESRYPFGVYAQQALLELAYVNWKDGENEQALAAIDRFQQLYPNHPGTDYALYLKGLINF 116
Query: 143 QMIRDVPYDQRATKLM----------LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
+ +++RY S Y A V N +A
Sbjct: 117 TPASAFMSSITGQDPAERDPKGLRASYDAFNDLIKRYPESKYTPDAEKRVAWLVNTIAMN 176
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
EV + RYY +RG Y+AA R Q V+ ++ A EEA+ +V++Y L + + + +
Sbjct: 177 EVHVARYYYERGAYIAAANRAQTVITDFEGAPATEEALYLMVQSYDKLGMTELKNDSQRV 236
Query: 253 IQERYPQGYW 262
+ +P +
Sbjct: 237 FDKNFPNSTF 246
>gi|21232519|ref|NP_638436.1| competence lipoprotein [Xanthomonas campestris pv. campestris str.
ATCC 33913]
gi|66767397|ref|YP_242159.1| competence lipoprotein [Xanthomonas campestris pv. campestris str.
8004]
gi|188990498|ref|YP_001902508.1| putative outer membrane lipoprotein [Xanthomonas campestris pv.
campestris str. B100]
gi|21114310|gb|AAM42360.1| competence lipoprotein [Xanthomonas campestris pv. campestris str.
ATCC 33913]
gi|66572729|gb|AAY48139.1| competence lipoprotein [Xanthomonas campestris pv. campestris str.
8004]
gi|167732258|emb|CAP50450.1| putative outer membrane lipoprotein [Xanthomonas campestris pv.
campestris]
Length = 293
Score = 95.2 bits (234), Expect = 9e-18, Method: Composition-based stats.
Identities = 55/249 (22%), Positives = 105/249 (42%), Gaps = 14/249 (5%)
Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
L + + G R + + ++Y K +++ N++ A + +
Sbjct: 13 LIALMLVMAFVVTGCHRGAKDKN----PDEGMPVEQLYGKGHGLMEKGNWAGAEASYKRL 68
Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
+P+ ++++ +A+ QY AGK+ S + +I YP +N+ Y+YYL G++ +
Sbjct: 69 IAQYPYGPYTEQAMIETAYAQYKAGKHDDTVSSVDRFIRTYPTHRNISYLYYLRGLANSN 128
Query: 144 MIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
D + + + + +RY NS Y AR + R+ A E
Sbjct: 129 RDTVFLRRVWSLDPSRRDLSSPQQAYNDFNTVTDRYPNSRYAPDARKRMIELRDIFAQHE 188
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
++ YYL+R +V+A R +L Y + +A+A L EAY L A + ++
Sbjct: 189 LDNALYYLRRDAWVSAAGRANYLLETYPQSAFQYDAVAVLAEAYTHLGNKTLAADARRVL 248
Query: 254 QERYPQGYW 262
+ PQ W
Sbjct: 249 ELNSPQHPW 257
>gi|254490941|ref|ZP_05104123.1| outer membrane assembly lipoprotein YfiO [Methylophaga thiooxidans
DMS010]
gi|224463850|gb|EEF80117.1| outer membrane assembly lipoprotein YfiO [Methylophaga thiooxydans
DMS010]
Length = 261
Score = 95.2 bits (234), Expect = 9e-18, Method: Composition-based stats.
Identities = 58/233 (24%), Positives = 100/233 (42%), Gaps = 13/233 (5%)
Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
G ++ D VY +A L ++ A Y+ Q FPF A+++
Sbjct: 19 GCSFFKKEEIKADES---WTVERVYSEANAALTLGDYETAITYYEQLEARFPFGEYAQQA 75
Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
LL SA+ Y + A + + ++ YP + N+DY YL G++
Sbjct: 76 LLESAYAHYKNDDPETAIATLDRFMRVYPLNPNIDYAIYLRGLTSFHRDIGFFEKYIPRD 135
Query: 157 L----------MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
L+ +V R+ S Y + + + RN+LA EV + YY++RG Y
Sbjct: 136 ESQRDPGAAEDALRDFKTLVTRFPQSRYAEDSTQRIVYLRNRLAQHEVNVANYYMRRGSY 195
Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
+AA R + VL NY EA+ + +AY L + D +++ + +++ YP
Sbjct: 196 IAAANRGKYVLENYPRTPSMPEALVVMAKAYKVLDMHDLSQDALRVLELNYPG 248
>gi|262376644|ref|ZP_06069872.1| competence lipoprotein comL [Acinetobacter lwoffii SH145]
gi|262308354|gb|EEY89489.1| competence lipoprotein comL [Acinetobacter lwoffii SH145]
Length = 321
Score = 95.2 bits (234), Expect = 9e-18, Method: Composition-based stats.
Identities = 57/253 (22%), Positives = 105/253 (41%), Gaps = 15/253 (5%)
Query: 17 YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76
Y++ A+T+ + A+ VG ++V ++ +KA L ++ A
Sbjct: 6 YKMTMLAVTLGIASAM---VGCSSNPKKEVVDKGP--ESSEQVYIQKAQKALDRNQYTDA 60
Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
+ FP + A ++ L +V++ Y+ A +L E +I P+ NVDY YY+
Sbjct: 61 AKQLEALETYFPTSQYAPQAQLELLYVKFQQKDYEGAVALAERFIRLNPQHPNVDYAYYV 120
Query: 137 VGMSYAQMIRDVPYDQRATKL----------MLQYMSRIVERYTNSPYVKGARFYVTVGR 186
G+S + + + K Q + RY +S Y A +
Sbjct: 121 RGVSNMEQNYNGLLRYTSLKQSHRDVSYLKVAYQNFVDFIRRYPSSTYAVDAAQRMQFIG 180
Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
+LA E+ R+ +KR Y+AA+ R V+ +Y EA+A + Y L +
Sbjct: 181 QELAEHEMNAARFNIKRKAYLAAVERGLWVIEHYPQTPQIPEALATVAYGYAQLGDKATS 240
Query: 247 REVVSLIQERYPQ 259
++ V +++ YP
Sbjct: 241 QQYVDVLKLNYPN 253
>gi|170723709|ref|YP_001751397.1| competence lipoprotein ComL [Pseudomonas putida W619]
gi|169761712|gb|ACA75028.1| competence lipoprotein ComL [Pseudomonas putida W619]
Length = 339
Score = 95.2 bits (234), Expect = 9e-18, Method: Composition-based stats.
Identities = 57/244 (23%), Positives = 99/244 (40%), Gaps = 16/244 (6%)
Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85
+ + + + E+Y++A L +++ A
Sbjct: 6 LLLIAILGLTAACSSNKEVI------DENLSEAELYQQAQADLDNSSYNSAVNKLKALES 59
Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
+PF A ++ L + Y + + A S E +I +P+ NVDY YYL G++
Sbjct: 60 RYPFGRYADQAQLELIYANYKNSEPEAAKSAAERFIRLHPQHPNVDYAYYLKGLTSFDQD 119
Query: 146 R----------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
R D A + +++ R+ NS Y A+ + RN LA+ E+
Sbjct: 120 RGLVARFLPLDMTKRDPGAARDSYNEFAQLTSRFPNSRYAPDAKQRMIYLRNLLASYEIH 179
Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
+ YYL R YVAA R + V+ N+ + + +A +VEAY + L D A + ++
Sbjct: 180 VADYYLSRQAYVAAANRGRYVVENFQETPSVGDGLAVMVEAYQKMHLDDLAATSLETLKL 239
Query: 256 RYPQ 259
YP
Sbjct: 240 NYPD 243
>gi|82703096|ref|YP_412662.1| TPR repeat-containing protein [Nitrosospira multiformis ATCC 25196]
gi|82411161|gb|ABB75270.1| TPR repeat [Nitrosospira multiformis ATCC 25196]
Length = 266
Score = 95.2 bits (234), Expect = 9e-18, Method: Composition-based stats.
Identities = 57/231 (24%), Positives = 98/231 (42%), Gaps = 14/231 (6%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
T + Y +A L + N++ A + F +P+ A+++ L + Y G+
Sbjct: 24 EDTKAWSASKYYTEAKSELNDGNYAAAIKLFEALEARYPYGRYAQQAQLEIGYAHYKDGE 83
Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ--------------MIRDVPYDQRAT 155
A + + +I +P NVDY YYL G++ D +A+
Sbjct: 84 QALAIAAADRFIKLHPNHPNVDYAYYLKGLANFNDDLGLMGIVTEKILNQDMSERDPKAS 143
Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
+ +V R+ S Y A + N +A E+++ RYY+KRG YVAA R Q
Sbjct: 144 HESFENFKELVNRFPKSKYAPDAVQRMKHLVNVVALNEIQVARYYMKRGGYVAAANRAQY 203
Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
L Y EEA+ +V+AY AL + D + ++++ +P +
Sbjct: 204 ALKEYPQTPATEEALFIMVKAYDALGMTDLRDDADRVMRKNFPNSRFLSDS 254
>gi|166713129|ref|ZP_02244336.1| competence lipoprotein [Xanthomonas oryzae pv. oryzicola BLS256]
Length = 293
Score = 95.2 bits (234), Expect = 9e-18, Method: Composition-based stats.
Identities = 57/249 (22%), Positives = 107/249 (42%), Gaps = 14/249 (5%)
Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
L + + G R + + ++Y KA +++ N++ A F +
Sbjct: 13 LIALMLVMAFVVTGCHRGAKDKN----PDEGMPVEQLYGKAHNLMEKGNWAGAEASFKRL 68
Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
+P+ ++++ SA+ QY AGK+ S + +I YP +N+ Y+YYL G++ +
Sbjct: 69 IAQYPYGPYTEQAMIESAYAQYKAGKHDDTVSSVDRFIRTYPTHRNIAYLYYLRGLANSN 128
Query: 144 MIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
D + + + + +RY NS Y AR + R+ A E
Sbjct: 129 RDTVFLRRVWSLDPSRRDLSSPQQAYNDFNTVTDRYPNSRYAADARKRMIELRDVFAQHE 188
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
++ YYL+R +V+A R +L Y + + +A+A L EAY L A + ++
Sbjct: 189 LDDALYYLRRDAWVSAAGRANYLLETYPQSAYQYDAVAVLAEAYTHLGNKTLAADARRVL 248
Query: 254 QERYPQGYW 262
+ P+ W
Sbjct: 249 ELNDPKHPW 257
>gi|56708306|ref|YP_170202.1| lipoprotein [Francisella tularensis subsp. tularensis SCHU S4]
gi|89256089|ref|YP_513451.1| lipoprotein [Francisella tularensis subsp. holarctica LVS]
gi|110670777|ref|YP_667334.1| lipoprotein [Francisella tularensis subsp. tularensis FSC198]
gi|118497848|ref|YP_898898.1| competence lipoprotein ComL [Francisella tularensis subsp. novicida
U112]
gi|167010774|ref|ZP_02275705.1| competence lipoprotein ComL [Francisella tularensis subsp.
holarctica FSC200]
gi|169656566|ref|YP_001428171.2| lipoprotein [Francisella tularensis subsp. holarctica FTNF002-00]
gi|187931811|ref|YP_001891796.1| competence lipoprotein ComL [Francisella tularensis subsp.
mediasiatica FSC147]
gi|224457426|ref|ZP_03665899.1| competence lipoprotein ComL [Francisella tularensis subsp.
tularensis MA00-2987]
gi|254367417|ref|ZP_04983443.1| conserved hypothetical lipoprotein [Francisella tularensis subsp.
holarctica 257]
gi|254369096|ref|ZP_04985108.1| hypothetical protein FTAG_00025 [Francisella tularensis subsp.
holarctica FSC022]
gi|254370789|ref|ZP_04986794.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis FSC033]
gi|254373203|ref|ZP_04988692.1| conserved hypothetical protein [Francisella tularensis subsp.
novicida GA99-3549]
gi|254374658|ref|ZP_04990139.1| conserved hypothetical protein [Francisella novicida GA99-3548]
gi|254875127|ref|ZP_05247837.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis MA00-2987]
gi|290954526|ref|ZP_06559147.1| competence lipoprotein ComL [Francisella tularensis subsp.
holarctica URFT1]
gi|295312042|ref|ZP_06802857.1| competence lipoprotein ComL [Francisella tularensis subsp.
holarctica URFT1]
gi|56604798|emb|CAG45877.1| conserved hypothetical lipoprotein [Francisella tularensis subsp.
tularensis SCHU S4]
gi|89143920|emb|CAJ79139.1| conserved hypothetical lipoprotein [Francisella tularensis subsp.
holarctica LVS]
gi|110321110|emb|CAL09260.1| conserved hypothetical lipoprotein [Francisella tularensis subsp.
tularensis FSC198]
gi|118423754|gb|ABK90144.1| competence lipoprotein ComL [Francisella novicida U112]
gi|134253233|gb|EBA52327.1| conserved hypothetical lipoprotein [Francisella tularensis subsp.
holarctica 257]
gi|151569032|gb|EDN34686.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis FSC033]
gi|151570930|gb|EDN36584.1| conserved hypothetical protein [Francisella novicida GA99-3549]
gi|151572377|gb|EDN38031.1| conserved hypothetical protein [Francisella novicida GA99-3548]
gi|157122046|gb|EDO66186.1| hypothetical protein FTAG_00025 [Francisella tularensis subsp.
holarctica FSC022]
gi|164551634|gb|ABU61215.2| lipoprotein with TPR domain [Francisella tularensis subsp.
holarctica FTNF002-00]
gi|187712720|gb|ACD31017.1| competence lipoprotein ComL [Francisella tularensis subsp.
mediasiatica FSC147]
gi|254841126|gb|EET19562.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis MA00-2987]
gi|282159537|gb|ADA78928.1| lipoprotein with TPR domain [Francisella tularensis subsp.
tularensis NE061598]
gi|332678563|gb|AEE87692.1| Putative component of the lipoprotein assembly complex (forms a
complex with YaeT, YfgL, and NlpB) [Francisella cf.
novicida Fx1]
Length = 274
Score = 95.2 bits (234), Expect = 9e-18, Method: Composition-based stats.
Identities = 57/256 (22%), Positives = 106/256 (41%), Gaps = 12/256 (4%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ +F I + + L +D L V +Y KA ++ Q + A
Sbjct: 1 MKRFLYLIIITFMLLLLSSCG--PKKDSELPQVYTGYTASFIYAKAHEQMQNQKYFDAIR 58
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV- 137
+ +PF +A K ++ +V Y + A +LG+++I YP S YVYY++
Sbjct: 59 SYKSLVAQYPFTPLAEKGMVDLIYVYYMDDESTMALALGQQFIKMYPYSIYKGYVYYMIG 118
Query: 138 ---------GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
+ +D + + ++ N +V A+ + N
Sbjct: 119 VVGFEDGRGMLQTYAPYDMNYHDPTGYQDAYTNFEKAIQLDPNGSFVPDAKRRMVFINNI 178
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
+A +I +Y KRG Y AAI R V+ NY + E+A+ + AY L L D+A+
Sbjct: 179 IARHYDDIAHFYFKRGAYNAAIDRASQVIRNYPQSTSTEDALVLTIRAYNKLGLYDQAKA 238
Query: 249 VVSLIQERYPQGYWAR 264
+ ++++ YP+ + +
Sbjct: 239 NIRVLKKNYPKNKFIK 254
>gi|307824792|ref|ZP_07655015.1| outer membrane assembly lipoprotein YfiO [Methylobacter
tundripaludum SV96]
gi|307734150|gb|EFO05004.1| outer membrane assembly lipoprotein YfiO [Methylobacter
tundripaludum SV96]
Length = 279
Score = 94.9 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 62/257 (24%), Positives = 99/257 (38%), Gaps = 15/257 (5%)
Query: 20 YKFALTIFFSIAVCFLV--GW---ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFS 74
+ L F I L G + S D + + +A L N+
Sbjct: 1 MRLILIKFLFICCLGLSLQGCETLKSLGSGDSDTEDEYADWNAEKFRGQAKTALDAGNYD 60
Query: 75 KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
KA + + +PF + ++ L A+ Y + A + + +I P S +VDY Y
Sbjct: 61 KAIKLYEALESRYPFGDESAQTQLDIAYAYYKNSDPEAAIAAADRFIKINPRSSSVDYAY 120
Query: 135 YLVGMSYAQMIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184
YL G+ D + + + R+ NS Y+ A+ +
Sbjct: 121 YLKGLVNYNRGIGFIDRFLPTDTSQRDPGTARDAYDNFAELTRRFPNSKYIADAQQRMIE 180
Query: 185 GRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244
+N LA EV + R+Y+KR YVAAI R V+ Y A+ + EAY L L D
Sbjct: 181 LKNNLAMYEVHVARFYMKRKAYVAAINRASTVVDKYQRTPAVPYALQIMQEAYTKLELPD 240
Query: 245 EAREVVSLIQERYPQGY 261
A++ + + YP G
Sbjct: 241 LAKDTTRVYELNYPNGP 257
>gi|18203349|sp|Q9PEU0|Y938_XYLFA RecName: Full=UPF0169 lipoprotein XF_0938; Flags: Precursor
Length = 292
Score = 94.9 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 63/251 (25%), Positives = 108/251 (43%), Gaps = 15/251 (5%)
Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
L + G R++ ++ D +Y+KA +K+ N++ A F +
Sbjct: 13 LLAMLLATFVLITGCHREAKKN-----ADDGMPVEHLYDKAHTLMKKGNWAGAEVSFKRL 67
Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
+P+ ++++ +A+ QY +GK+ A S + +I YP N+ Y+YYL G+S +
Sbjct: 68 IAQYPYGPYTEQAMVENAYAQYKSGKHDDAVSSIDRFIRTYPTHHNIPYLYYLRGLSNSN 127
Query: 144 MIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
D A + +++RY NS Y A+ +T RN A E
Sbjct: 128 RDTIFLRKVWSLDLSRRDLSAPQQAYNDFKTVLDRYPNSRYAADAKKQMTELRNMFAQYE 187
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+ + YYL+R +VAA R +L Y + +A+A L EAY L A ++
Sbjct: 188 MNVTLYYLRRTAWVAAAGRANFLLETYPQSAFQYDAVAALGEAYTHLGNKTLADNARQVL 247
Query: 254 QERYPQGYWAR 264
Q P W +
Sbjct: 248 QTNAPDHPWLK 258
>gi|71065815|ref|YP_264542.1| lipoprotein [Psychrobacter arcticus 273-4]
gi|71038800|gb|AAZ19108.1| possible lipoprotein (DUF0169) [Psychrobacter arcticus 273-4]
Length = 359
Score = 94.9 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 64/252 (25%), Positives = 111/252 (44%), Gaps = 12/252 (4%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSS---RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76
+ +I LVG + + VT + ++ Y A+ + + +++A
Sbjct: 8 FIKLSSITLLALSVNLVGCQTFKNLTGGKDVDAVVTAEKSEQAYYNDAIAQIDKGRYTQA 67
Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
E +P A ++LL + QY +GKY+ AA+ E++I YP + V Y YY+
Sbjct: 68 VEDLTNLRTFYPTGQYAEQALLDMMYAQYESGKYETAAASAEQFIRLYPSNPQVSYAYYV 127
Query: 137 VGMSYAQ---------MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
G++ Q + D ++ ++ +Y NSPY A +T N
Sbjct: 128 RGVANMQGSSEGLKLFKLNQAERDTAYYRIAFANFQELLNKYPNSPYASDAAQRMTFIYN 187
Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
Q A E+ +Y++R YVAA+ R + V Y +E +A+ L ++ L L D A+
Sbjct: 188 QFAESEMSAANWYIEREAYVAAVNRAKWVFQYYPLSESVPDAITVLAYSHEKLGLTDLAK 247
Query: 248 EVVSLIQERYPQ 259
E +L+Q YP
Sbjct: 248 EYKTLLQINYPN 259
Score = 39.0 bits (88), Expect = 0.81, Method: Composition-based stats.
Identities = 12/81 (14%), Positives = 24/81 (29%)
Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
+ + +G Y A+ + Y ++AE+A+ ++ A + A
Sbjct: 45 EKSEQAYYNDAIAQIDKGRYTQAVEDLTNLRTFYPTGQYAEQALLDMMYAQYESGKYETA 104
Query: 247 REVVSLIQERYPQGYWARYVE 267
YP Y
Sbjct: 105 AASAEQFIRLYPSNPQVSYAY 125
>gi|37525234|ref|NP_928578.1| outer membrane protein assembly complex subunit YfiO [Photorhabdus
luminescens subsp. laumondii TTO1]
gi|36784661|emb|CAE13561.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 244
Score = 94.9 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 52/249 (20%), Positives = 96/249 (38%), Gaps = 17/249 (6%)
Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
+ + + + L G + E+Y K L++ ++ A
Sbjct: 1 MMIRIKYLVAAATLSLALSGCAGNKN-------AVPDSPPAEIYSKGQEKLQKGSYPDAI 53
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
+ +PF +++ L + Y + A + + +I P N+DYV Y+
Sbjct: 54 KQLETLDNRYPFGPYSQQVQLDLIYAYYKSSDLPMALASIDRFIRLNPTHPNIDYVLYMR 113
Query: 138 ----------GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
+ I D ++ + S++V + NS Y A + +
Sbjct: 114 GLTSQALDNSPLQSFFGIDHSDRDPEHARVAFKDFSQLVRYHPNSLYTADAIKRLMFIKE 173
Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
+LA E+ + YY KRG YVA + R + +L +Y D + EA+ + AY L L+ +A
Sbjct: 174 RLAKYELSVVEYYNKRGAYVAVVNRIEQMLRDYPDTQSTLEALPYMKSAYTHLGLIAQAD 233
Query: 248 EVVSLIQER 256
+V LI
Sbjct: 234 KVAKLIAAN 242
>gi|187477716|ref|YP_785740.1| lipoprotein [Bordetella avium 197N]
gi|115422302|emb|CAJ48826.1| lipoprotein [Bordetella avium 197N]
Length = 282
Score = 94.9 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 54/242 (22%), Positives = 97/242 (40%), Gaps = 14/242 (5%)
Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
G ++ T ++Y A + N+ +A + +PF A+++
Sbjct: 33 GCGTSDNK----YDKTAGWSAEQLYADAKQEVAAGNWKEARDRLTAIESRYPFGTYAQQA 88
Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV----------GMSYAQMIR 146
L+ A+V + G+ +QA + + + YP DYV YL M+
Sbjct: 89 LIELAYVNWKDGENEQALAAIDRFQQLYPNHPGTDYVLYLKGLINFTPASAFMANLTGQD 148
Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
D + + + +++R+ +S Y A + N +A EV + RYY RG Y
Sbjct: 149 PAERDPKGLRASYDAFNELIKRFPDSKYTPDAEQRMNWLVNAIAMNEVHVARYYYTRGAY 208
Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
VAAI R Q VL ++ A EEA+ +V +Y L + + ++ + +P
Sbjct: 209 VAAINRAQTVLTDFDGAPATEEALYIMVLSYDKLQMKQLKEDTERVLDKNFPNSKLKAEG 268
Query: 267 ET 268
Sbjct: 269 FK 270
>gi|332525785|ref|ZP_08401929.1| hypothetical protein RBXJA2T_08043 [Rubrivivax benzoatilyticus JA2]
gi|332109339|gb|EGJ10262.1| hypothetical protein RBXJA2T_08043 [Rubrivivax benzoatilyticus JA2]
Length = 253
Score = 94.9 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 57/246 (23%), Positives = 102/246 (41%), Gaps = 16/246 (6%)
Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90
L G + + ++Y A ++ ++ A + ++
Sbjct: 2 VATLLAGCGSTTKEERA------DVAAEKLYADAKDNMEAGSYEPAIKALSRVEGLAAGT 55
Query: 91 GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY----------LVGMS 140
+A++S + A++ + G+ QA + E +I P S +DY Y +
Sbjct: 56 VLAQQSQIDLAYLYWKTGERAQALTTIERFIRLNPSSPALDYAMYLRGLINFNEDMGLFG 115
Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
DQRA + Q ++VE++ S Y A+ + N LAA EV + RYY
Sbjct: 116 RIARQDLSERDQRAARDAYQAFKQLVEQFPQSRYTPDAKLRMDYIVNSLAAYEVHVARYY 175
Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
KRG YVAA R Q +A + + AEE + +V++Y L L+ + + ++Q+ YP
Sbjct: 176 FKRGAYVAAANRAQQAVAEFQRSPAAEEGLFLMVQSYDRLQLVQLRDDALRVLQKNYPDS 235
Query: 261 YWARYV 266
+
Sbjct: 236 RFLAQA 241
>gi|152988068|ref|YP_001350516.1| competence protein ComL [Pseudomonas aeruginosa PA7]
gi|150963226|gb|ABR85251.1| competence protein ComL [Pseudomonas aeruginosa PA7]
Length = 341
Score = 94.5 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 63/240 (26%), Positives = 105/240 (43%), Gaps = 16/240 (6%)
Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
++V + + ++Y++A L ++++ A +PF A ++
Sbjct: 18 CSSNK------ETVDENLSESQLYQQAQDDLNNKSYNSAVTKLKALESRYPFGRYAEQAQ 71
Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR----------D 147
L + Y + + A + E +I +P+ NVDY YYL G+S R
Sbjct: 72 LELIYANYKNMEPEAARAAAERFIRLHPQHPNVDYAYYLKGLSSFDQDRGLVARFLPLDM 131
Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
D A + +++ R+ NS Y A+ + RN LAA EV +G YYLKR YV
Sbjct: 132 TKRDPGAARDSFNEFAQLTSRFPNSRYAPDAKARMVYLRNLLAAYEVHVGHYYLKRQAYV 191
Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
AA R + V+ N+ + + +A +VEAY L L D A + ++ YP + E
Sbjct: 192 AAANRGRYVVENFQETPAVGDGLAIMVEAYRRLGLDDLASTSLETLKLNYPDNASLKDGE 251
>gi|325129837|gb|EGC52644.1| competence lipoprotein comL [Neisseria meningitidis OX99.30304]
Length = 256
Score = 94.5 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 55/244 (22%), Positives = 105/244 (43%), Gaps = 11/244 (4%)
Query: 33 CFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV 92
L Q + D +T ++Y +A L N+++A + + FP +
Sbjct: 1 LALSACATQGTVDKDA-QITQDWSVEKLYAEAQDELNSSNYTRAVKLYEILESRFPTSRH 59
Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY----------VYYLVGMSYA 142
AR+S L +A+ Y + +A + E + +P+ N+DY ++
Sbjct: 60 ARQSQLDTAYAYYKDDEKDKALAAIERFRRLHPQHPNMDYALYLRGLVLFNEDQSFLNKL 119
Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
D +A + Q + +V+R+ NS Y A + + L E+ + RYY+K
Sbjct: 120 ASQDWSDRDPKANREAYQAFAELVQRFPNSKYAADATARMVKLVDALGGNEMSVARYYMK 179
Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
RG Y+AA R Q ++ +Y + + EE++A L AY L A + +++ +P+ +
Sbjct: 180 RGAYIAAANRAQKIIGSYQNTRYVEESLAILELAYQKLGKPQLAADTRRVLETNFPKSPF 239
Query: 263 ARYV 266
+
Sbjct: 240 LTHA 243
>gi|300722271|ref|YP_003711555.1| putative lipoprotein [Xenorhabdus nematophila ATCC 19061]
gi|297628772|emb|CBJ89350.1| putative lipoprotein with tetratricopeptide repeats (TPR) domain
[Xenorhabdus nematophila ATCC 19061]
Length = 243
Score = 94.5 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 50/248 (20%), Positives = 94/248 (37%), Gaps = 17/248 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + + + L G ++Y L+E N+ A +
Sbjct: 1 MIRMKYLVAATTLSLVLSGCSSNKD-------AVPDIPPSQIYSIGQEKLQEGNYKAAIK 53
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV- 137
+PF +++ L + Y + ++ A + + +I P N+DYV+Y+
Sbjct: 54 QLESLDNRYPFGPYSQQVQLDLIYAYYKSAEFPLAIASIDRFIRLNPTHPNIDYVWYMRG 113
Query: 138 ---------GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
+ I D + + + ++ Y +S Y A + + +
Sbjct: 114 LVSQALDDSALQEFFGIDRSDRDPEHARAAFRDFNHLIHDYPSSQYSADAIKRLAFLKER 173
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
LA E+ + YY KR YVA + R + +L +Y D EA++ + AY L L+ EA +
Sbjct: 174 LARYELAVVEYYTKRSAYVAVVNRVEQMLRDYPDTHATREALSYMESAYKELGLIAEADK 233
Query: 249 VVSLIQER 256
V LI
Sbjct: 234 VAKLIAAN 241
>gi|56460292|ref|YP_155573.1| competence lipoprotein ComL [Idiomarina loihiensis L2TR]
gi|56179302|gb|AAV82024.1| Competence lipoprotein ComL [Idiomarina loihiensis L2TR]
Length = 256
Score = 94.5 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 55/247 (22%), Positives = 113/247 (45%), Gaps = 15/247 (6%)
Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
+F S+ L G QS + + + +Y++A + N + A E + +
Sbjct: 10 LVFSSVLGLMLAGCSSQSDEEQVSKTQIEY-----LYDQAQESMANGNLNLAQEQLSSLN 64
Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
+ +PF A + L ++ Y +A + + +I+ P K+VDY Y+ G+ +
Sbjct: 65 KRYPFGPFAHQIQLDLIYLHYKLDNTDEALAAIDRFISLNPNHKDVDYALYMRGLVNQRA 124
Query: 145 IRDVPYD----------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
+ ++ + + + +V +Y S Y A+ + +++LA KE+
Sbjct: 125 EHNAIHNLAGVDRSDRDSSMAQAAFKDFAELVRKYPKSEYAADAKKRLIALKSRLAKKEL 184
Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
I +YY++R Y+AA R + VL ++SD E A+A +VE+Y L L + + + +++
Sbjct: 185 AIAQYYMERQAYLAAANRGRYVLEHFSDTPEVENALAIMVESYDQLELPELREDAMKVLR 244
Query: 255 ERYPQGY 261
+P+
Sbjct: 245 ANFPENQ 251
>gi|325916248|ref|ZP_08178529.1| outer membrane assembly lipoprotein YfiO [Xanthomonas vesicatoria
ATCC 35937]
gi|325537542|gb|EGD09257.1| outer membrane assembly lipoprotein YfiO [Xanthomonas vesicatoria
ATCC 35937]
Length = 293
Score = 94.5 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 55/249 (22%), Positives = 106/249 (42%), Gaps = 14/249 (5%)
Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
L + + G R + + ++Y K +++ N++ A + +
Sbjct: 13 LIALMLVMAFVVTGCHRGAKDKN----PDEGMPVEQLYGKGHGLMEKGNWAGAEASYKRL 68
Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
+P+ ++++ +A+ QY AGK+ S + +I YP +N+ Y+YYL G++ +
Sbjct: 69 IAQYPYGPYTEQAMIETAYAQYKAGKHDDTVSSVDRFIRTYPTHRNISYLYYLRGLANSN 128
Query: 144 MIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
D + + + + +RY NS Y AR + R+ A E
Sbjct: 129 RDTVFLRRVWSLDPSRRDLSSPQQAYNDFNTVTDRYPNSRYAPDARKRMIELRDVFAQHE 188
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
++ YYL+R +V+A R +L Y + + +A+A L EAY L A + ++
Sbjct: 189 LDNALYYLRRNAWVSAAGRANYLLETYPQSAYQYDAVAVLAEAYTHLGNKTLAADARRVL 248
Query: 254 QERYPQGYW 262
+ PQ W
Sbjct: 249 ELNSPQHPW 257
>gi|257453789|ref|ZP_05619067.1| DNA uptake lipoprotein [Enhydrobacter aerosaccus SK60]
gi|257448716|gb|EEV23681.1| DNA uptake lipoprotein [Enhydrobacter aerosaccus SK60]
Length = 360
Score = 94.5 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 60/247 (24%), Positives = 109/247 (44%), Gaps = 15/247 (6%)
Query: 28 FSIAVCFLVGW-----ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
++A+ L G + + + + ++ Y+ A +K+ N +KA N
Sbjct: 13 ITVALTTLSGCQTLKNSKLFGGKDEVVATKAEKSEQGYYQAASDNIKKGNLAKAISQLND 72
Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
+P + ++LL + QY G Y A + + +I YP + VDY YY+ G+S
Sbjct: 73 LRTFYPVGDYSEQALLDLMYAQYQHGDYLDAIASADRFIQSYPSNPQVDYAYYVRGISNM 132
Query: 143 Q----------MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
Q + D +++ +++ R+ NS Y A + NQL+
Sbjct: 133 QAASGGVMKYTKLNPAHRDMGYSRIAFNNFQQLINRFPNSAYAPDAALRMRYIYNQLSES 192
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
E+++ R+Y+KR YVAA R + V Y +E E++A + +Y L + D A + L
Sbjct: 193 EMDVARWYIKRKAYVAAANRAKWVFQYYPQSEAIPESIATIAYSYDKLGMTDTANQYKQL 252
Query: 253 IQERYPQ 259
++ YP
Sbjct: 253 LRINYPG 259
>gi|254252276|ref|ZP_04945594.1| competence lipoprotein ComL [Burkholderia dolosa AUO158]
gi|124894885|gb|EAY68765.1| competence lipoprotein ComL [Burkholderia dolosa AUO158]
Length = 309
Score = 94.5 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 55/239 (23%), Positives = 95/239 (39%), Gaps = 14/239 (5%)
Query: 34 FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93
+ G + T ++Y +A L ++ K +YF PF A
Sbjct: 59 LIAGCHGLPQKQ----DETATWSNNKLYSEAQDALSGGDWGKCAKYFEALQGRDPFGHFA 114
Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM--------- 144
+++ + A+ + + A + +I +P+ ++ Y YYL GM +
Sbjct: 115 QQAQINVAYCNWKDNEIAAADQAVDRFIQLHPDHPDIAYAYYLKGMIHFNDDLGLFGRFS 174
Query: 145 -IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
D +A + +V+RY S Y A + N LA+ EV YY +R
Sbjct: 175 GQDMSERDPQALRESYDAFKVVVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRR 234
Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
G YVAAI R QL + +Y A E+A+ +V +Y L A + ++ +P +
Sbjct: 235 GAYVAAINRAQLAIKDYKGAPAIEDALHIMVLSYGKLNQPQLAEDTKRVLAGTFPDSPY 293
>gi|83648562|ref|YP_436997.1| DNA uptake lipoprotein [Hahella chejuensis KCTC 2396]
gi|83636605|gb|ABC32572.1| DNA uptake lipoprotein [Hahella chejuensis KCTC 2396]
Length = 275
Score = 94.5 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 65/249 (26%), Positives = 106/249 (42%), Gaps = 19/249 (7%)
Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
+F +A L + V ++E Y+KA L NF +A +
Sbjct: 4 IRALFAMLAFVLLTACAS---------APPQVLSEKEYYDKAKSALDSGNFLEAARHLED 54
Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
PF A ++ L + Y++ ++A S E +I +PES +VDY YY+ G++
Sbjct: 55 LETYHPFGRYAEQAQLDLIYAHYNSLNPERAESAAERFIRLHPESPHVDYAYYIKGLAAY 114
Query: 143 QMI----------RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
D K + S +V + +SPY A + + +LA
Sbjct: 115 YADLGLGPRFLPIDVNSRDPGRAKEAFRDFSTLVTNFPDSPYAADAEKRMLAIKERLAQY 174
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
E+ + RYY++R YVAA+ R Q V+ NY D EA++ +VE Y L + A + + L
Sbjct: 175 EMHVARYYIRRQAYVAAVARAQYVVENYPDTPVVPEALSLMVELYRYLGMQRHADDALVL 234
Query: 253 IQERYPQGY 261
+ YP
Sbjct: 235 LAASYPDHK 243
Score = 35.9 bits (80), Expect = 6.4, Method: Composition-based stats.
Identities = 13/121 (10%), Positives = 30/121 (24%), Gaps = 18/121 (14%)
Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
+ + ++++ + A + + + ++ H +
Sbjct: 44 NFLEAARHLEDLETYHPFGRYAEQAQLDLIYAHYNSLNPERAESAAERFIRLHPESPHVD 103
Query: 228 EAMARLVEA--YVALAL----------------MDEAREVVSLIQERYPQGYWARYVETL 269
A A Y L L EA S + +P +A E
Sbjct: 104 YAYYIKGLAAYYADLGLGPRFLPIDVNSRDPGRAKEAFRDFSTLVTNFPDSPYAADAEKR 163
Query: 270 V 270
+
Sbjct: 164 M 164
>gi|15603585|ref|NP_246659.1| hypothetical protein PM1720 [Pasteurella multocida subsp. multocida
str. Pm70]
gi|18202811|sp|Q9CKA5|Y1720_PASMU RecName: Full=UPF0169 lipoprotein PM1720; Flags: Precursor
gi|12722132|gb|AAK03804.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
Length = 260
Score = 94.1 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 57/248 (22%), Positives = 103/248 (41%), Gaps = 18/248 (7%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K F ++ + + R ++E+Y L+ ++S+A
Sbjct: 1 MRKLKSFTFIALTAFAITACSGSKD--------VEQRPEQELYNVGQTHLQNGDYSQAIR 52
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
Y + FP + + ++LL + Y Y Q L + + QYP S+N+DYV Y+ G
Sbjct: 53 YLDAVRSRFPGSSYSEQTLLNLIYANYKTQDYTQTLVLADRFFQQYPTSRNLDYVLYMAG 112
Query: 139 MSYAQMIRDVPYDQRATKLM----------LQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
++ A + + D +V+ + NSPY + A + +
Sbjct: 113 LTNAALGDNYIQDLFRIDRATRESSSIKAAFANFQTLVQNFPNSPYAQDALARMAYIKAS 172
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
LA E+ I ++Y KR +VA R +L Y D + EA+ + EAY + L D A +
Sbjct: 173 LARHELAIAKFYAKRDAHVAVANRVVGMLQQYPDTQATYEALPLMQEAYEKMNLNDLAAK 232
Query: 249 VVSLIQER 256
++I+
Sbjct: 233 TAAIIEAN 240
>gi|268593136|ref|ZP_06127357.1| competence lipoprotein ComL [Providencia rettgeri DSM 1131]
gi|291311409|gb|EFE51862.1| competence lipoprotein ComL [Providencia rettgeri DSM 1131]
Length = 243
Score = 94.1 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 58/248 (23%), Positives = 103/248 (41%), Gaps = 17/248 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + + + LVG V+ E+Y L++ NF A +
Sbjct: 1 MIRMKNLVAAATLSLILVGCSST-------PEVSPDSTPAEIYATGQQKLQDGNFKAAIK 53
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
F +PF A++ L + Y + + A + + ++ P N+DYV Y+ G
Sbjct: 54 QFEALDNRYPFGPYAQQVQLDLIYAYYKSAELPMAIAAIDRFMRLNPTHPNIDYVLYMRG 113
Query: 139 MSYAQMIR----------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
++ + D + ++ + S++V Y NS Y A + +++
Sbjct: 114 LTAMALDDSLLQGLFGIDRSDRDPQHARVAFKDFSQLVRYYPNSLYSNDASKRLVFLKDR 173
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
LA ++ + YY KRG YVA + R Q +L +Y D E A+A + AY + L EA +
Sbjct: 174 LAKFDLSVVEYYNKRGAYVAVVNRVQQMLKDYPDTEATRNALAYMEIAYNEMGLNQEANK 233
Query: 249 VVSLIQER 256
V S+I
Sbjct: 234 VASIIAAN 241
>gi|15599741|ref|NP_253235.1| competence protein ComL [Pseudomonas aeruginosa PAO1]
gi|107099792|ref|ZP_01363710.1| hypothetical protein PaerPA_01000810 [Pseudomonas aeruginosa PACS2]
gi|116052690|ref|YP_793006.1| competence protein ComL [Pseudomonas aeruginosa UCBPP-PA14]
gi|218893640|ref|YP_002442509.1| competence protein ComL [Pseudomonas aeruginosa LESB58]
gi|254238707|ref|ZP_04932030.1| competence protein ComL [Pseudomonas aeruginosa C3719]
gi|254244557|ref|ZP_04937879.1| competence protein ComL [Pseudomonas aeruginosa 2192]
gi|296391366|ref|ZP_06880841.1| competence protein ComL [Pseudomonas aeruginosa PAb1]
gi|12231047|sp|P33641|Y9F5_PSEAE RecName: Full=UPF0169 lipoprotein PA4545; AltName: Full=ORFY;
Flags: Precursor
gi|9950789|gb|AAG07933.1|AE004868_4 competence protein ComL [Pseudomonas aeruginosa PAO1]
gi|32423743|gb|AAP81267.1| competence protein [Pseudomonas aeruginosa PA14]
gi|115587911|gb|ABJ13926.1| competence lipoprotein ComL [Pseudomonas aeruginosa UCBPP-PA14]
gi|126170638|gb|EAZ56149.1| competence protein ComL [Pseudomonas aeruginosa C3719]
gi|126197935|gb|EAZ61998.1| competence protein ComL [Pseudomonas aeruginosa 2192]
gi|218773868|emb|CAW29682.1| competence protein ComL [Pseudomonas aeruginosa LESB58]
Length = 341
Score = 94.1 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 63/240 (26%), Positives = 105/240 (43%), Gaps = 16/240 (6%)
Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
++V + + ++Y++A L ++++ A +PF A ++
Sbjct: 18 CSSNK------ETVDENLSESQLYQQAQDDLNNKSYNSAVTKLKALESRYPFGRYAEQAQ 71
Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR----------D 147
L + Y + + A + E +I +P+ NVDY YYL G+S R
Sbjct: 72 LELIYANYKNMEPEAARAAAERFIRLHPQHPNVDYAYYLKGLSSFDQDRGLLARFLPLDM 131
Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
D A + +++ R+ NS Y A+ + RN LAA EV +G YYLKR YV
Sbjct: 132 TKRDPGAARDSFNEFAQLTSRFPNSRYAPDAKARMVYLRNLLAAYEVHVGHYYLKRQAYV 191
Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
AA R + V+ N+ + + +A +VEAY L L D A + ++ YP + E
Sbjct: 192 AAANRGRYVVENFQETPAVGDGLAIMVEAYRRLGLDDLASTSLETLKLNYPDNASLKDGE 251
>gi|289662939|ref|ZP_06484520.1| putative competence lipoprotein [Xanthomonas campestris pv.
vasculorum NCPPB702]
Length = 293
Score = 94.1 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 56/249 (22%), Positives = 106/249 (42%), Gaps = 14/249 (5%)
Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
L + + G R + + ++Y K +++ N++ A + +
Sbjct: 13 LIALMLVMAFVVTGCHRGAKDKN----PDEGMPVEQLYGKGHDLMEKGNWAGAEASYKRL 68
Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
+P+ ++++ SA+ QY AGK+ S + +I YP +N+ Y+YYL G++ +
Sbjct: 69 IAQYPYGPYTEQAMIESAYAQYKAGKHDDTVSSVDRFIRTYPTHRNISYLYYLRGLANSN 128
Query: 144 MIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
D + + + + +RY NS Y AR + R+ A E
Sbjct: 129 RDTVFLRRVWSLDPSRRDLSSPQQAYNDFNTVTDRYPNSRYAADARKRMIELRDVFAQHE 188
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
++ YYL+R +V+A R +L Y + + +A+A L EAY L A + ++
Sbjct: 189 LDNALYYLRRDAWVSAAGRANYLLETYPQSAYQYDAVAVLAEAYTHLGNKTLAADARRVL 248
Query: 254 QERYPQGYW 262
+ PQ W
Sbjct: 249 ELNDPQHPW 257
>gi|313107190|ref|ZP_07793389.1| competence protein ComL [Pseudomonas aeruginosa 39016]
gi|310879891|gb|EFQ38485.1| competence protein ComL [Pseudomonas aeruginosa 39016]
Length = 341
Score = 94.1 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 63/240 (26%), Positives = 105/240 (43%), Gaps = 16/240 (6%)
Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
++V + + ++Y++A L ++++ A +PF A ++
Sbjct: 18 CSSNK------ETVDENLSESQLYQQAQDDLNNKSYNSAVTKLKALESRYPFGRYAEQAQ 71
Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR----------D 147
L + Y + + A + E +I +P+ NVDY YYL G+S R
Sbjct: 72 LELIYANYKNMEPEAARAAAERFIRLHPQHPNVDYAYYLKGLSSFDQDRGLLARFLPLDM 131
Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
D A + +++ R+ NS Y A+ + RN LAA EV +G YYLKR YV
Sbjct: 132 TKRDPGAARDSFNEFAQLTSRFPNSRYAPDAKARMVYLRNLLAAYEVHVGHYYLKRQAYV 191
Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
AA R + V+ N+ + + +A +VEAY L L D A + ++ YP + E
Sbjct: 192 AAANRGRYVVENFQETPAVGDGLAIMVEAYRRLGLDDLASTSLETLKLNYPDNASLKDGE 251
>gi|148653371|ref|YP_001280464.1| DNA uptake lipoprotein-like protein [Psychrobacter sp. PRwf-1]
gi|148572455|gb|ABQ94514.1| DNA uptake lipoprotein-like protein [Psychrobacter sp. PRwf-1]
Length = 393
Score = 94.1 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 63/252 (25%), Positives = 108/252 (42%), Gaps = 13/252 (5%)
Query: 21 KFALTIFFSIA-VCFLVGWE--RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
K L A + L G + + + T + + Y++AV + + + A
Sbjct: 22 KNKLAFAVLTAGLLSLTGCQTLKNITGKDSDTVATAEKTDAQYYQEAVKAMDKGRYIYAS 81
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
E + +P A ++LL + Q+ Y+ AA+ E++I YP + VDY YY+
Sbjct: 82 EQLTELRTFYPTGAYAEQALLDLMYSQFQTKDYELAATSAEQFIKLYPRNPQVDYAYYVR 141
Query: 138 GMSYAQ----------MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
G++ ++ D +L ++ R+ NS Y A +T N
Sbjct: 142 GVANMHAGTSSLLSIARMQQADRDTSYYRLAFSNFQDLLSRFPNSSYAPDAAQRMTYIYN 201
Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
Q A E+ R+Y+KR YVAA R + V Y ++ E++A L + L L D A
Sbjct: 202 QFAESELSAARWYIKREAYVAAANRAKWVFQYYPLSQQIPESIAILAYSNEQLGLTDLAN 261
Query: 248 EVVSLIQERYPQ 259
+ +L+Q YP+
Sbjct: 262 QYKTLLQINYPE 273
>gi|206560229|ref|YP_002230993.1| putative lipoprotein [Burkholderia cenocepacia J2315]
gi|198036270|emb|CAR52166.1| putative lipoprotein [Burkholderia cenocepacia J2315]
Length = 274
Score = 94.1 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 53/239 (22%), Positives = 96/239 (40%), Gaps = 14/239 (5%)
Query: 34 FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93
+ G + T ++Y +A L ++ K +YF PF A
Sbjct: 24 LIAGCHGLPQKQ----DETATWSNNKLYSEAQDALSGGDWGKCAKYFESLQGRDPFGHFA 79
Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM--------- 144
+++ + A+ + + A + +I +P+ ++ Y YYL GM +
Sbjct: 80 QQAQINVAYCNWKDNEPAAADQAVDRFIQLHPDHPDIPYAYYLKGMIHFNDDLGLFGRFS 139
Query: 145 -IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
D +A + +V+R+ S Y A + N LA+ EV YY +R
Sbjct: 140 GQDMSERDPQALRESYDAFKVVVDRFPKSKYAPDAAARMRYIVNALASHEVHAADYYYRR 199
Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
G YVAAI R QL + +Y A E+A+ ++ +Y L + A + ++ +P +
Sbjct: 200 GAYVAAINRAQLAIKDYKGAPAIEDALHIMILSYGKLNQPELAEDTKRVLAGTFPDSPY 258
>gi|325273288|ref|ZP_08139565.1| competence lipoprotein ComL [Pseudomonas sp. TJI-51]
gi|324101573|gb|EGB99142.1| competence lipoprotein ComL [Pseudomonas sp. TJI-51]
Length = 339
Score = 93.7 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 55/244 (22%), Positives = 99/244 (40%), Gaps = 16/244 (6%)
Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85
+ + + + E+Y++A L +++ A
Sbjct: 6 LLLIAILGLTAACSSNKEVI------DENLSEAELYQQAQADLDNSSYTSAVNKLKALES 59
Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
+PF A ++ L + Y + + A S E +I +P+ NVDY YYL G++
Sbjct: 60 RYPFGRYADQAQLELIYANYKNAEPEAAKSAAERFIRLHPQHPNVDYAYYLKGLTSFDQD 119
Query: 146 R----------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
R D A + +++ R+ NS Y A+ + RN LA+ E+
Sbjct: 120 RGLLARFLPLDMTKRDPGAARDSYNEFAQLTSRFPNSRYAPDAKQRMIYLRNLLASYEIH 179
Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
+ YYL R YVAA R + V+ N+ + + +A +VE+Y + L + A + ++
Sbjct: 180 VADYYLSRQAYVAAANRGRYVVENFQETPSVGDGLAVMVESYQKMHLDELAATSLETLKL 239
Query: 256 RYPQ 259
YP
Sbjct: 240 NYPD 243
>gi|45403|emb|CAA78141.1| putative protein of no known function [Pseudomonas aeruginosa PAO1]
Length = 341
Score = 93.7 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 63/240 (26%), Positives = 104/240 (43%), Gaps = 16/240 (6%)
Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
++V + + ++Y++A L ++++ A +PF A ++
Sbjct: 18 CSSNK------ETVDENLSESQLYQQAQDDLNNKSYNSAVTKLKALESRYPFGRYAEQAQ 71
Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR----------D 147
L + Y + + A + E +I +P+ NVDY YYL G+S R
Sbjct: 72 LELIYANYKNMEPEAARAAAERFIRLHPQHPNVDYAYYLKGLSSFDQDRGLLARFLPLDM 131
Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
D A + +++ R NS Y A+ + RN LAA EV +G YYLKR YV
Sbjct: 132 TKRDPGAARDSFNEFAQLTSRLPNSRYAPDAKARMVYLRNLLAAYEVHVGHYYLKRQAYV 191
Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
AA R + V+ N+ + + +A +VEAY L L D A + ++ YP + E
Sbjct: 192 AAANRGRYVVENFQETPAVGDGLAIMVEAYRRLGLDDLASTSLETLKLNYPDNASLKDGE 251
>gi|115314565|ref|YP_763288.1| hypothetical protein FTH_0702 [Francisella tularensis subsp.
holarctica OSU18]
gi|115129464|gb|ABI82651.1| conserved hypothetical protein [Francisella tularensis subsp.
holarctica OSU18]
Length = 274
Score = 93.7 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 57/256 (22%), Positives = 106/256 (41%), Gaps = 12/256 (4%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ +F I + + L +D L V +Y KA ++ Q + A
Sbjct: 1 MKRFLYLIIITFMLLLLSSCG--PKKDSELPQVYTGYTASFIYAKAHEQMQNQKYFDAIR 58
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV- 137
+ +PF +A K ++ +V Y + A +LG+++I YP S YVYY++
Sbjct: 59 SYKSLVAQYPFTSLAEKGMVDLIYVYYMDDESTMALALGQQFIKMYPYSIYKGYVYYMIG 118
Query: 138 ---------GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
+ +D + + ++ N +V A+ + N
Sbjct: 119 VVGFEDGRGMLQTYAPYDMNYHDPTGYQDAYTNFEKAIQLDPNGSFVPDAKRRMVFINNI 178
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
+A +I +Y KRG Y AAI R V+ NY + E+A+ + AY L L D+A+
Sbjct: 179 IARHYDDIAHFYFKRGAYNAAIDRASQVIRNYPQSTSTEDALVLTIRAYNKLGLYDQAKA 238
Query: 249 VVSLIQERYPQGYWAR 264
+ ++++ YP+ + +
Sbjct: 239 NIRVLKKNYPKNKFIK 254
>gi|329895228|ref|ZP_08270892.1| putative component of the lipoprotein assembly complex [gamma
proteobacterium IMCC3088]
gi|328922466|gb|EGG29808.1| putative component of the lipoprotein assembly complex [gamma
proteobacterium IMCC3088]
Length = 303
Score = 93.7 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 53/246 (21%), Positives = 108/246 (43%), Gaps = 15/246 (6%)
Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
L IF + + L D ++ ++++Y +A +L+ +N+ A + Q
Sbjct: 20 LRIFLASCILLLGACASNDELDSQANAA-----EQQIYSEAQKYLRSKNYDMAIKALQQL 74
Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL------- 136
+PF A ++ L + Y A + + A +I +P+ ++DY +Y+
Sbjct: 75 ESRYPFGKYAEQAQLEIIYAHYGAYEPEAAIEAANRFIRLHPQHPSIDYAFYMKGLAAYS 134
Query: 137 ---VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
S + D + + ++++ R+ S Y AR + RN LA E
Sbjct: 135 GNSNIFSRFLPTSESSRDTKHIEEAFTEFAQLLARFPESEYGADARARMVHLRNLLARHE 194
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+++ YY +RG Y+AA+ R + V+ NY + +A+A + Y+ L + + A+ + +
Sbjct: 195 IDVANYYFRRGAYLAAVNRGRYVIENYQGSTAMADALAVMAHGYLLLDMPELAQTSIDTL 254
Query: 254 QERYPQ 259
+ YP
Sbjct: 255 KVNYPD 260
>gi|114331226|ref|YP_747448.1| TPR repeat-containing protein [Nitrosomonas eutropha C91]
gi|114308240|gb|ABI59483.1| TPR repeat [Nitrosomonas eutropha C91]
Length = 257
Score = 93.7 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 62/254 (24%), Positives = 105/254 (41%), Gaps = 18/254 (7%)
Query: 32 VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91
+ L S + V + Y +A L E N+S A + F +P+
Sbjct: 1 MVLLAACGILSEKTV----DNSQWSASKFYIEAKNELNEGNYSAAVKLFEALEARYPYGR 56
Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL--------------V 137
A+++ L A+ Y + A + + +I YP N+DY YY+
Sbjct: 57 FAQQAQLEIAYAYYKDQEQASAIAAADRFIQLYPHHHNIDYAYYIKGLASFNDDQGLLGY 116
Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
+ D +A++ + +V RY +S Y A + N LA E+ +
Sbjct: 117 ITTKIIKQDLSERDAKASRESFEDFKLLVTRYPDSKYTPDALQRMAYLVNALARGEIHVA 176
Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
RYY+KR Y+AA+ R Q VL Y EEA+ + AY L L+D + +I++ +
Sbjct: 177 RYYMKRKAYIAALRRAQFVLEEYPQTPATEEALYIMASAYNELGLIDLREDTEKVIKKNF 236
Query: 258 PQGYWARYVETLVK 271
P+ + +LV+
Sbjct: 237 PESAYLTDSGSLVE 250
>gi|21243944|ref|NP_643526.1| competence lipoprotein [Xanthomonas axonopodis pv. citri str. 306]
gi|78048899|ref|YP_365074.1| putative competence lipoprotein [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|294625814|ref|ZP_06704431.1| competence lipoprotein [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
gi|294666974|ref|ZP_06732203.1| competence lipoprotein [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
gi|325929043|ref|ZP_08190198.1| outer membrane assembly lipoprotein YfiO [Xanthomonas perforans
91-118]
gi|21109554|gb|AAM38062.1| competence lipoprotein [Xanthomonas axonopodis pv. citri str. 306]
gi|78037329|emb|CAJ25074.1| putative competence lipoprotein [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|292599889|gb|EFF44009.1| competence lipoprotein [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
gi|292603263|gb|EFF46685.1| competence lipoprotein [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
gi|325540576|gb|EGD12163.1| outer membrane assembly lipoprotein YfiO [Xanthomonas perforans
91-118]
Length = 293
Score = 93.7 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 56/249 (22%), Positives = 106/249 (42%), Gaps = 14/249 (5%)
Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
L + + G R + + ++Y K +++ N++ A + +
Sbjct: 13 LIALMLVMAFVVTGCHRGAKDKN----PDEGMPVEQLYGKGHNLMEKGNWAGAEASYKRL 68
Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
+P+ ++++ +A+ QY AGK+ A S + +I YP +N+ Y+YYL G++ +
Sbjct: 69 IAQYPYGPYTEQAMIETAYAQYKAGKHDDAVSSVDRFIRTYPTHRNISYLYYLRGLANSN 128
Query: 144 MIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
D + + + + +RY NS Y AR + R+ A E
Sbjct: 129 RDTVFLRRVWSLDPSRRDLSSPQQAYNDFNTVTDRYPNSRYAADARKRMIELRDIFAQHE 188
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
++ YYL+R +V+A R +L Y + +A+A L EAY L A + ++
Sbjct: 189 LDNALYYLRRDAWVSAAGRANYLLETYPQSAFQYDAVAVLAEAYTHLGNKTLAADARRVL 248
Query: 254 QERYPQGYW 262
+ PQ W
Sbjct: 249 ELNDPQHPW 257
>gi|289209196|ref|YP_003461262.1| outer membrane assembly lipoprotein YfiO [Thioalkalivibrio sp.
K90mix]
gi|288944827|gb|ADC72526.1| outer membrane assembly lipoprotein YfiO [Thioalkalivibrio sp.
K90mix]
Length = 279
Score = 93.7 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 56/221 (25%), Positives = 99/221 (44%), Gaps = 10/221 (4%)
Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
+ T ++Y +A L E N+ +A EY+ + +PF A+++ + + Y A
Sbjct: 27 EDPTLGWSASQLYGEAKNALNEGNYDQAVEYYEKLEARYPFGRYAQQAQIEIPYAYYKAR 86
Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV----------PYDQRATKLM 158
+ + A + + +I P N+DY YYL G+ + D +
Sbjct: 87 EPEAAIAAVDRFIQLNPRHPNLDYAYYLRGLINFNRQQGFLANLFPRDPAEMDPEPFEQA 146
Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
Q R++ + +S Y + + + RN LAA E+ + +Y++R +VA R + VLA
Sbjct: 147 FQDFDRLIREFPDSRYAQDSYLRMVYIRNALAAYELRVAEFYMERTAWVAGAERARHVLA 206
Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
Y AE +A+ L AY L L D A + +++ YP
Sbjct: 207 TYPGAEVQPQALGVLWRAYTELGLEDYADATMQVLELNYPD 247
>gi|119505581|ref|ZP_01627652.1| competence protein ComL [marine gamma proteobacterium HTCC2080]
gi|119458524|gb|EAW39628.1| competence protein ComL [marine gamma proteobacterium HTCC2080]
Length = 336
Score = 93.7 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 58/244 (23%), Positives = 107/244 (43%), Gaps = 14/244 (5%)
Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85
I + + G D+ + ++++Y +A L NF+ A
Sbjct: 51 ITLVALITVVSGCSWFGKDDIEI----ADNGEQQIYLEAQRSLDSGNFNTAIRTLQLLES 106
Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
+PF A ++ L + Y A +++ A + +I +P+ NVDY YY+ G+S M
Sbjct: 107 RYPFGRYAEQAQLELVYAHYGAYEFEAAIEAADRFIRLHPQHPNVDYAYYMKGLSAFDME 166
Query: 146 ----------RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
D D K ++++ R+ +S Y AR + RN LA EV
Sbjct: 167 GGFLASFVPTDDTKRDVSHIKEAFAEFAQLLARFPDSAYAPDARARMVHMRNMLARHEVH 226
Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
+ YY +RG Y+AA+ R + V+ + + +A + +AY+ L D A++ ++++ E
Sbjct: 227 VANYYFRRGAYMAALNRGRYVVEHMQQTPSVADGLAIMAQAYILLDFNDLAKDSIAVLHE 286
Query: 256 RYPQ 259
+P
Sbjct: 287 NFPD 290
>gi|149377767|ref|ZP_01895500.1| DNA uptake lipoprotein [Marinobacter algicola DG893]
gi|149357939|gb|EDM46428.1| DNA uptake lipoprotein [Marinobacter algicola DG893]
Length = 292
Score = 93.7 bits (230), Expect = 3e-17, Method: Composition-based stats.
Identities = 55/258 (21%), Positives = 106/258 (41%), Gaps = 17/258 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + + A F+ ++ L ++ YE A + NF++A +
Sbjct: 15 MRSVVRLLLVTTAALFISACASNDKQEEVL-------PEQTYYENARDAMNSGNFNEAEQ 67
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+ +PF A ++ L + +Y + A + + ++ P+S + DY Y+ G
Sbjct: 68 NLDYLETYYPFGRYAEQAQLDLIYARYQNLDLEGARAAADRFLRLNPQSDHADYALYMRG 127
Query: 139 MSYAQMIRDVPYDQRA----------TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
++ + + + Q S ++ RY +S Y AR + RN+
Sbjct: 128 LASYNLDIGLAARYFPVDVSARDPGEQRQAFQDFSELLNRYPSSEYAPDARQRMIAIRNR 187
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
LA E+ RYY+ R Y+AA R + ++ NYS EEA+ L E + + L A +
Sbjct: 188 LAELELYAARYYISREAYIAANNRARYIIENYSTTPSVEEALIILAETFRFMDLKKGATD 247
Query: 249 VVSLIQERYPQGYWARYV 266
V++++E +P
Sbjct: 248 AVAMLKENFPDSTAFNES 265
>gi|289667067|ref|ZP_06488142.1| putative competence lipoprotein [Xanthomonas campestris pv.
musacearum NCPPB4381]
Length = 293
Score = 93.7 bits (230), Expect = 3e-17, Method: Composition-based stats.
Identities = 56/249 (22%), Positives = 106/249 (42%), Gaps = 14/249 (5%)
Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
L + + G R + + ++Y K +++ N++ A + +
Sbjct: 13 LIALMLVMAFVVTGCHRGAKDKN----PDEGMPVEQLYGKGHDLMEKGNWAGAEASYKRL 68
Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
+P+ ++++ SA+ QY AGK+ S + +I YP +N+ Y+YYL G++ +
Sbjct: 69 IAQYPYGPYTEQAMIESAYAQYKAGKHDDTVSSVDRFIRTYPTHRNISYLYYLRGLANSN 128
Query: 144 MIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
D + + + + +RY NS Y AR + R+ A E
Sbjct: 129 RDTVFLRRVWSLDPSRRDLSSPQQAYNDFNTVTDRYPNSRYAADARKRMIELRDVFAQHE 188
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
++ YYL+R +V+A R +L Y + + +A+A L EAY L A + ++
Sbjct: 189 LDNALYYLRRDAWVSAAGRANYLLETYPQSAYQYDAVAMLAEAYTHLGNKTLAADARRVL 248
Query: 254 QERYPQGYW 262
+ PQ W
Sbjct: 249 ELNDPQHPW 257
>gi|297183891|gb|ADI20013.1| DNA uptake lipoprotein [uncultured gamma proteobacterium
EB000_65A11]
Length = 285
Score = 93.7 bits (230), Expect = 3e-17, Method: Composition-based stats.
Identities = 60/251 (23%), Positives = 106/251 (42%), Gaps = 13/251 (5%)
Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
+++ FL G + + + E Y+ + L+ N+ A E FP
Sbjct: 15 LLSLIFLAGCSSDKAEEG---EEDIDATELEYYKMSQSALRSGNYQTAVERLQFLEARFP 71
Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
F A ++ L + Y + + + A + + +I +P+ NVDY YYL GM+ +
Sbjct: 72 FGRYAEQAQLEIIYAYYKSAQSESARAAADRFIRLHPQHPNVDYAYYLRGMASFDEDTNF 131
Query: 149 PYDQRATKLM----------LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
S++++R+ NS Y A++ + RN LA E+ + R
Sbjct: 132 LEKFIPMNAATRDPGAARDSFNDFSQLIKRFPNSQYAPDAQYRMIYLRNLLAEYEINVAR 191
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
YY+ RG Y+AA R + V N+ + + +A +VEAY L + A E + ++ E +P
Sbjct: 192 YYIYRGAYIAAANRGRHVFENFQETPSVPDGLAIMVEAYTLLNMETLASEALMVLSENFP 251
Query: 259 QGYWARYVETL 269
L
Sbjct: 252 DHQSLGRAGKL 262
>gi|167031684|ref|YP_001666915.1| competence lipoprotein ComL [Pseudomonas putida GB-1]
gi|166858172|gb|ABY96579.1| competence lipoprotein ComL [Pseudomonas putida GB-1]
Length = 339
Score = 93.3 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 55/244 (22%), Positives = 99/244 (40%), Gaps = 16/244 (6%)
Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85
+ + + + E+Y++A L +++ A
Sbjct: 6 LLLIAILGLTAACSSNKEVI------DENLSEAELYQQAQADLDNSSYTSAVNKLKALES 59
Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
+PF A ++ L + Y + + A S E +I +P+ NVDY YYL G++
Sbjct: 60 RYPFGRYADQAQLELIYANYKNSEPEAAKSAAERFIRLHPQHPNVDYAYYLKGLTSFDQD 119
Query: 146 R----------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
R D A + +++ R+ NS Y A+ + RN LA+ E+
Sbjct: 120 RGLLARFLPLDMTKRDPGAARDSYNEFAQLTSRFPNSRYAPDAKQRMIYLRNLLASYEIH 179
Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
+ YYL R YVAA R + V+ N+ + + +A +VE+Y + L + A + ++
Sbjct: 180 VADYYLSRQAYVAAANRGRYVVENFQETPSVGDGLAVMVESYQKMHLDELAASSLETLKL 239
Query: 256 RYPQ 259
YP
Sbjct: 240 NYPD 243
>gi|189426001|ref|YP_001953178.1| outer membrane assembly lipoprotein YfiO [Geobacter lovleyi SZ]
gi|189422260|gb|ACD96658.1| outer membrane assembly lipoprotein YfiO [Geobacter lovleyi SZ]
Length = 248
Score = 93.3 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 58/253 (22%), Positives = 109/253 (43%), Gaps = 10/253 (3%)
Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
+L ++ L + A+ L G D E+Y + ++ + +A
Sbjct: 2 KLLRYRLLVA-GTALLMLQGCASAPKTDP---------TPEELYAQGETAFQKSRYEQAV 51
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
E + + FP +A ++ + A + + +A + E++ +P + + Y
Sbjct: 52 ESWKKVKETFPEPELAARAEIGIANAYFLNHDFIEAGAAYEDFRKLHPTHELAQFSLYRQ 111
Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
G++ +I + DQ TK L + +Y S YV + + R +LA E+ +G
Sbjct: 112 GLASFNLITGIDTDQTPTKNALALFESFIRQYPKSQYVAKVQEKIADCRGKLAQYEIYVG 171
Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
R+Y + Y AAI RF+ L N+ D +E + L +AY+A D+A+ V+S + Y
Sbjct: 172 RFYYRTDNYQAAIGRFEGALTNFPDYTGNDETLFYLAKAYIANRQSDKAQTVLSRLIREY 231
Query: 258 PQGYWARYVETLV 270
P G + L+
Sbjct: 232 PTGKYLDDARKLL 244
>gi|258592923|emb|CBE69232.1| putative Tetratricopeptide TPR_2 precursor [NC10 bacterium 'Dutch
sediment']
Length = 304
Score = 93.3 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 45/256 (17%), Positives = 106/256 (41%), Gaps = 1/256 (0%)
Query: 15 WAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFS 74
+ + + L + + + G V +E+ +A + +
Sbjct: 1 MRFFMPRLLLVAGCATILFSVSGCAGLDLFSPKQAEVPAG-SDQELMSRAEAAFALKQYD 59
Query: 75 KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
+ ++ + +FP + + + L S + ++ ++ + + ++ +P+ + +D
Sbjct: 60 EGRKHLQRLINNFPESELVPTARLNSGRTYFDEKRFDESRAEYQRFMELFPQHEQLDEAQ 119
Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
Y +G+SY + + V DQ T + ++ + NS +V A+ + QL +E+
Sbjct: 120 YYIGLSYFRQMEKVDRDQTMTNNAAREFRTLINDFRNSQFVSDAQAKLAECYRQLVQREL 179
Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
+G++Y R Y AAIPRF+ +L Y +++ ++A+ L E+ L A+ +
Sbjct: 180 YVGKFYFHREAYGAAIPRFESILKEYPGSQYDDQALYYLGESLWELEQKVPAKAAFQRLI 239
Query: 255 ERYPQGYWARYVETLV 270
+P A +
Sbjct: 240 AEFPDSDMAPPAAKRI 255
>gi|260221243|emb|CBA29611.1| Competence lipoprotein comL [Curvibacter putative symbiont of Hydra
magnipapillata]
Length = 268
Score = 93.3 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 57/258 (22%), Positives = 103/258 (39%), Gaps = 20/258 (7%)
Query: 19 LYKFALTIF----FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFS 74
+ + L++ + L G T +Y +A + +
Sbjct: 1 MLRAKLSVVCATMLTTMATLLAGCSSAPVDK------TAGMSPNRLYAEAKDEMGASQWD 54
Query: 75 KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
KA + +A+++ L A+ Q+ AG+ Q+ + E +I +P S +DY
Sbjct: 55 KAVPLLEKLEARAAGTPLAQQAQLDKAYAQFKAGEQAQSLATLERFIKLHPASPALDYAI 114
Query: 135 YLVGMSYAQ----------MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184
YL G+ DQ+A K + + R+ +S Y A+ +
Sbjct: 115 YLRGIVNFNDDLGLLSSITRQDLAERDQKAAKESFESFKELTTRFPDSKYAPDAQQRMNY 174
Query: 185 GRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244
LA EV + +YY KRG Y+AA R Q + +Y D EEA+ L ++Y AL +
Sbjct: 175 IVGSLAQYEVHVAKYYYKRGAYLAAANRAQQCITDYRDVPATEEALFILYKSYDALGMEQ 234
Query: 245 EAREVVSLIQERYPQGYW 262
+ ++++ +PQ +
Sbjct: 235 LRDDAKRVLEKNFPQSDF 252
>gi|148285105|ref|YP_001249195.1| TPR repeat-containing protein [Orientia tsutsugamushi str. Boryong]
gi|146740544|emb|CAM81139.1| tetratricopeptide repeat protein with 1 trp repeats [Orientia
tsutsugamushi str. Boryong]
Length = 264
Score = 93.3 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 52/260 (20%), Positives = 126/260 (48%), Gaps = 8/260 (3%)
Query: 12 FEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQ 71
+++F T+F + + + ++ + YL + + Y +A L +++
Sbjct: 7 IINKLLNMFRFICTLFVLLCFTNCIIFAKEKTIITYL-------SEDDAYSRAELLFQKK 59
Query: 72 NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
++ A + F + A K+ LM + Y AG+Y +A+ + + +I +P + +
Sbjct: 60 KYNAAAKQFFDIFVQHLGSNTATKAELMQGYSLYLAGQYSEASEVLDNFIRLHPVHQKIA 119
Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
VYYL ++ + + ++ + ++++++ S + A+ + V LA+
Sbjct: 120 DVYYLKALAEYKQAHNQQDLEQL-LHAKLALQQVIDKFPKSDFAVKAKEKINVISKNLAS 178
Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
+++IG++YL + +AA+ RF V+ YS + EA+ R+ ++Y L E +E ++
Sbjct: 179 SQIDIGKFYLNKKNPIAALNRFNTVVDKYSHTSYYPEAIYRIAQSYALLGRKQEMKEQLA 238
Query: 252 LIQERYPQGYWARYVETLVK 271
++ ++P G W++ +L++
Sbjct: 239 ILNIKFPNGTWSKRASSLLQ 258
>gi|119946872|ref|YP_944552.1| putative lipoprotein [Psychromonas ingrahamii 37]
gi|119865476|gb|ABM04953.1| putative lipoprotein [Psychromonas ingrahamii 37]
Length = 257
Score = 93.3 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 56/253 (22%), Positives = 110/253 (43%), Gaps = 15/253 (5%)
Query: 19 LYKFALTIFFSIAVCFLV-GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
+ K I S+ + L G + + + D + +YE+A L+ +F KA
Sbjct: 1 MKKILRLITSSLMIVLLSTGCSSKKAEKPKV----DDKPPMVLYEQAKQALESASFEKAS 56
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL- 136
+ +PF + + L + Y G+ + + ++ P ++DY+YY+
Sbjct: 57 DILEALDTRYPFGPHSDQVQLDLIYAYYKRGETAFTLANIDRFLRLNPTHPDLDYIYYMR 116
Query: 137 ---------VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
I D + +SRI++ Y +S Y A+ + ++
Sbjct: 117 GLTYISADQQFFQDLFGIDRYNRDPNNAIQAFKDLSRIIKYYPSSEYAVDAQQRIIDLKD 176
Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
+LA E+ I ++YLKR Y+AAI R ++VL NY D E+A+ ++ +Y L + +
Sbjct: 177 RLARYEIGIAQWYLKREAYIAAINRCKIVLNNYPDMPAVEQALEIMIASYNVLGIEEPKM 236
Query: 248 EVVSLIQERYPQG 260
+++++ YP+
Sbjct: 237 NALAVLKLNYPKN 249
>gi|123441244|ref|YP_001005231.1| outer membrane protein assembly complex subunit YfiO [Yersinia
enterocolitica subsp. enterocolitica 8081]
gi|332160280|ref|YP_004296857.1| outer membrane protein assembly complex subunit YfiO [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
gi|122088205|emb|CAL10993.1| putative lipoprotein [Yersinia enterocolitica subsp. enterocolitica
8081]
gi|318604492|emb|CBY25990.1| putative component of the lipoprotein assembly complex (forms a
complex with YaeT, YfgL, and NlpB) [Yersinia
enterocolitica subsp. palearctica Y11]
gi|325664510|gb|ADZ41154.1| outer membrane protein assembly complex subunit YfiO [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
gi|330863601|emb|CBX73711.1| UPF0169 lipoprotein yfiO [Yersinia enterocolitica W22703]
Length = 243
Score = 93.3 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 52/248 (20%), Positives = 100/248 (40%), Gaps = 17/248 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + + + L G V E+Y A L++ NF A
Sbjct: 1 MTRMKYLVAAATLSLVLTGCSSNKD-------VVPDNPPSELYATAQQKLQDGNFKGAIT 53
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+PF +++ L + Y + A + + ++ P N+DYV Y+ G
Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKSADLPLAQASIDRFMRLNPTHPNIDYVLYMRG 113
Query: 139 MSYAQMIR----------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
++ + D + K + +++++ Y NS Y A+ + +++
Sbjct: 114 LTDMALDDSALQGFFGIDRSDRDPQHAKAAFRDFNQLIQSYPNSQYATDAQKRLMFLKDR 173
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
LA E+ + +YY KRG YVA + R + +L +Y D + +A+ + AY L L +A +
Sbjct: 174 LAKHELAVAQYYTKRGAYVAVVNRVEQMLRDYPDTQATRDALPLMENAYKQLQLNAQADK 233
Query: 249 VVSLIQER 256
V +I
Sbjct: 234 VAKIIAAN 241
>gi|22124819|ref|NP_668242.1| outer membrane protein assembly complex subunit YfiO [Yersinia
pestis KIM 10]
gi|45440504|ref|NP_992043.1| outer membrane protein assembly complex subunit YfiO [Yersinia
pestis biovar Microtus str. 91001]
gi|51595195|ref|YP_069386.1| outer membrane protein assembly complex subunit YfiO [Yersinia
pseudotuberculosis IP 32953]
gi|108808760|ref|YP_652676.1| outer membrane protein assembly complex subunit YfiO [Yersinia
pestis Antiqua]
gi|108810983|ref|YP_646750.1| outer membrane protein assembly complex subunit YfiO [Yersinia
pestis Nepal516]
gi|145600173|ref|YP_001164249.1| outer membrane protein assembly complex subunit YfiO [Yersinia
pestis Pestoides F]
gi|153948219|ref|YP_001402172.1| outer membrane protein assembly complex subunit YfiO [Yersinia
pseudotuberculosis IP 31758]
gi|153997672|ref|ZP_02022772.1| putative lipoprotein [Yersinia pestis CA88-4125]
gi|162419347|ref|YP_001607808.1| outer membrane protein assembly complex subunit YfiO [Yersinia
pestis Angola]
gi|165926624|ref|ZP_02222456.1| putative lipoprotein [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165936801|ref|ZP_02225368.1| putative lipoprotein [Yersinia pestis biovar Orientalis str. IP275]
gi|166010083|ref|ZP_02230981.1| putative lipoprotein [Yersinia pestis biovar Antiqua str. E1979001]
gi|166213080|ref|ZP_02239115.1| putative lipoprotein [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167399369|ref|ZP_02304893.1| putative lipoprotein [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167421522|ref|ZP_02313275.1| putative lipoprotein [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167423440|ref|ZP_02315193.1| putative lipoprotein [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|167470272|ref|ZP_02334976.1| putative lipoprotein [Yersinia pestis FV-1]
gi|170025567|ref|YP_001722072.1| outer membrane protein assembly complex subunit YfiO [Yersinia
pseudotuberculosis YPIII]
gi|186894213|ref|YP_001871325.1| outer membrane protein assembly complex subunit YfiO [Yersinia
pseudotuberculosis PB1/+]
gi|218930303|ref|YP_002348178.1| outer membrane protein assembly complex subunit YfiO [Yersinia
pestis CO92]
gi|229838894|ref|ZP_04459053.1| Lipoprotein required for outer membrane biogenesis [Yersinia pestis
biovar Orientalis str. PEXU2]
gi|229896562|ref|ZP_04511729.1| Lipoprotein required for outer membrane biogenesis [Yersinia pestis
Pestoides A]
gi|229899461|ref|ZP_04514604.1| Lipoprotein required for outer membrane biogenesis [Yersinia pestis
biovar Orientalis str. India 195]
gi|229901199|ref|ZP_04516322.1| Lipoprotein required for outer membrane biogenesis [Yersinia pestis
Nepal516]
gi|270489384|ref|ZP_06206458.1| outer membrane assembly lipoprotein YfiO [Yersinia pestis KIM D27]
gi|294504992|ref|YP_003569054.1| putative lipoprotein [Yersinia pestis Z176003]
gi|21957645|gb|AAM84493.1|AE013693_9 hypothetical protein y0911 [Yersinia pestis KIM 10]
gi|45435361|gb|AAS60920.1| putative lipoprotein [Yersinia pestis biovar Microtus str. 91001]
gi|51588477|emb|CAH20085.1| putative lipoprotein [Yersinia pseudotuberculosis IP 32953]
gi|108774631|gb|ABG17150.1| lipoprotein [Yersinia pestis Nepal516]
gi|108780673|gb|ABG14731.1| putative lipoprotein [Yersinia pestis Antiqua]
gi|115348914|emb|CAL21871.1| putative lipoprotein [Yersinia pestis CO92]
gi|145211869|gb|ABP41276.1| lipoprotein [Yersinia pestis Pestoides F]
gi|149289309|gb|EDM39389.1| putative lipoprotein [Yersinia pestis CA88-4125]
gi|152959714|gb|ABS47175.1| putative lipoprotein [Yersinia pseudotuberculosis IP 31758]
gi|162352162|gb|ABX86110.1| putative lipoprotein [Yersinia pestis Angola]
gi|165915450|gb|EDR34060.1| putative lipoprotein [Yersinia pestis biovar Orientalis str. IP275]
gi|165921552|gb|EDR38749.1| putative lipoprotein [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165990990|gb|EDR43291.1| putative lipoprotein [Yersinia pestis biovar Antiqua str. E1979001]
gi|166205867|gb|EDR50347.1| putative lipoprotein [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166960441|gb|EDR56462.1| putative lipoprotein [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167051873|gb|EDR63281.1| putative lipoprotein [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167057610|gb|EDR67356.1| putative lipoprotein [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|169752101|gb|ACA69619.1| putative lipoprotein [Yersinia pseudotuberculosis YPIII]
gi|186697239|gb|ACC87868.1| putative lipoprotein [Yersinia pseudotuberculosis PB1/+]
gi|229681924|gb|EEO78017.1| Lipoprotein required for outer membrane biogenesis [Yersinia pestis
Nepal516]
gi|229687863|gb|EEO79936.1| Lipoprotein required for outer membrane biogenesis [Yersinia pestis
biovar Orientalis str. India 195]
gi|229695260|gb|EEO85307.1| Lipoprotein required for outer membrane biogenesis [Yersinia pestis
biovar Orientalis str. PEXU2]
gi|229700340|gb|EEO88372.1| Lipoprotein required for outer membrane biogenesis [Yersinia pestis
Pestoides A]
gi|262363057|gb|ACY59778.1| putative lipoprotein [Yersinia pestis D106004]
gi|262366981|gb|ACY63538.1| putative lipoprotein [Yersinia pestis D182038]
gi|270337888|gb|EFA48665.1| outer membrane assembly lipoprotein YfiO [Yersinia pestis KIM D27]
gi|294355451|gb|ADE65792.1| putative lipoprotein [Yersinia pestis Z176003]
gi|320016470|gb|ADW00042.1| Lipoprotein required for outer membrane biogenesis [Yersinia pestis
biovar Medievalis str. Harbin 35]
Length = 243
Score = 93.3 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 50/248 (20%), Positives = 99/248 (39%), Gaps = 17/248 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + + + L G V E+Y A L++ NF A
Sbjct: 1 MTRMKYLVAAATLSLVLTGCSSNKD-------VVPDNPPSELYATAQQKLQDGNFKGAIT 53
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+PF +++ L + Y + A + + ++ P N+DYV Y+ G
Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKSADLPMAQASIDRFMRLNPTHPNIDYVLYMRG 113
Query: 139 MSYAQMIR----------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
++ + D + + + +++++ Y NS Y A+ + +++
Sbjct: 114 LTDMALDDSALQGFFGIDRSDRDPQHARAAFRDFNQLIQNYPNSQYATDAQKRLVFLKDR 173
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
LA E+ + +YY KRG YVA + R ++ +Y D + +A+ + AY L L +A +
Sbjct: 174 LAKYELAVAQYYTKRGAYVAVVNRVDQMMRDYPDTQATRDALPLMENAYKQLQLNAQADK 233
Query: 249 VVSLIQER 256
V +I
Sbjct: 234 VAKIIAAN 241
>gi|329297085|ref|ZP_08254421.1| outer membrane biogenesis protein BamD [Plautia stali symbiont]
Length = 246
Score = 93.3 bits (229), Expect = 4e-17, Method: Composition-based stats.
Identities = 53/247 (21%), Positives = 95/247 (38%), Gaps = 17/247 (6%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
K + LVG S E+Y A L++ NF A +
Sbjct: 4 MKHLVAAATLSLSLALVGCSGSSD-------PVPDSPPSEIYATAQQKLQDGNFKAAIKQ 56
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
+PF +++ L + Y A + ++ P N+DYV Y+ G+
Sbjct: 57 LEALDNRYPFGPYSQQVQLDLIYAYYKNTDLPLAQAAISRFMRLNPTHPNIDYVIYMKGL 116
Query: 140 SYAQMIR----------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
+ + D + + S+++ Y N Y A+ +T ++ L
Sbjct: 117 TDMALDDSALQDFFGIDRSDRDPTHARDAFRDFSQLLRGYPNCQYAADAQKRLTFLKDSL 176
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
A E+ + ++Y KRG YVA + R + ++ +Y D + +A+ + AY L L EA +V
Sbjct: 177 AKYELSVAQFYTKRGAYVAVVNRVEGMMRDYPDTQATRDALPLMENAYRQLQLTTEADKV 236
Query: 250 VSLIQER 256
+I
Sbjct: 237 AKIIAAN 243
>gi|317049250|ref|YP_004116898.1| outer membrane assembly lipoprotein YfiO [Pantoea sp. At-9b]
gi|316950867|gb|ADU70342.1| outer membrane assembly lipoprotein YfiO [Pantoea sp. At-9b]
Length = 243
Score = 93.3 bits (229), Expect = 4e-17, Method: Composition-based stats.
Identities = 52/249 (20%), Positives = 97/249 (38%), Gaps = 17/249 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + + + LVG E+Y A L++ NF A +
Sbjct: 1 MTRMKHLVAAATLSLALVGCSGSKD-------TVPDSPPSEIYATAQQKLQDGNFKAAIK 53
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+PF +++ L + Y A + ++ P N+DYV Y+ G
Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIARFMRLNPTHPNIDYVIYMKG 113
Query: 139 MSYAQMIR----------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
++ + D + + S+++ Y NS Y A+ + + +
Sbjct: 114 LTDMALDDSALQGFFGIDRSDRDPTHARDAFRDFSQLLRGYPNSQYAADAQKRLVFLKER 173
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
LA E+ + ++Y KRG YVA + R + ++ +Y D + EA+ + AY L L EA +
Sbjct: 174 LAKYELSVAQFYTKRGAYVAVVNRVEGMMKDYPDTQATHEALPLMENAYRQLQLTAEADK 233
Query: 249 VVSLIQERY 257
V +I +
Sbjct: 234 VAKIIAANH 242
>gi|283786207|ref|YP_003366072.1| lipoprotein [Citrobacter rodentium ICC168]
gi|282949661|emb|CBG89280.1| putative lipoprotein [Citrobacter rodentium ICC168]
Length = 245
Score = 92.9 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 49/248 (19%), Positives = 95/248 (38%), Gaps = 17/248 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + + + FL G E+Y A L++ N+ +A
Sbjct: 1 MTRMKYLVAAATLSLFLAGCSGSKEE-------VPDNPPNEIYATAQQKLQDGNWKQAIT 53
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+PF +++ L + Y A + + +I P N+DYV Y+ G
Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRG 113
Query: 139 MSYAQMIR----------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
++ + D + + S++V Y NS Y A + +++
Sbjct: 114 LTNMALDDSALQGFFGVDRSDRDPQHARAAFNDFSKLVRGYPNSQYTTDATKRLVFLKDR 173
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
LA E + YY KRG +VA + R + +L ++ D + +A+ + AY + + +A +
Sbjct: 174 LAKYEYSVAEYYTKRGAWVAVVNRVEGMLRDFPDTQATRDALPLMENAYREMQMTTQAEK 233
Query: 249 VVSLIQER 256
V +I
Sbjct: 234 VAKIIAAN 241
>gi|107029026|ref|YP_626121.1| DNA uptake lipoprotein-like [Burkholderia cenocepacia AU 1054]
gi|116689815|ref|YP_835438.1| DNA uptake lipoprotein-like protein [Burkholderia cenocepacia
HI2424]
gi|170733154|ref|YP_001765101.1| DNA uptake lipoprotein-like protein [Burkholderia cenocepacia
MC0-3]
gi|105898190|gb|ABF81148.1| DNA uptake lipoprotein-like protein [Burkholderia cenocepacia AU
1054]
gi|116647904|gb|ABK08545.1| DNA uptake lipoprotein-like protein [Burkholderia cenocepacia
HI2424]
gi|169816396|gb|ACA90979.1| DNA uptake lipoprotein-like protein [Burkholderia cenocepacia
MC0-3]
Length = 274
Score = 92.9 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 53/239 (22%), Positives = 96/239 (40%), Gaps = 14/239 (5%)
Query: 34 FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93
+ G + T ++Y +A L ++ K +YF PF A
Sbjct: 24 LIAGCHGLPQKQ----DETATWSNNKLYSEAQDALSGGDWGKCAKYFESLQGRDPFGHFA 79
Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM--------- 144
+++ + A+ + + A + +I +P+ ++ Y YYL GM +
Sbjct: 80 QQAQINVAYCNWKDNEAAAADQAVDRFIQLHPDHPDIPYAYYLKGMIHFNDDLGLFGRFS 139
Query: 145 -IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
D +A + +V+R+ S Y A + N LA+ EV YY +R
Sbjct: 140 GQDMSERDPQALRESYDAFKVVVDRFPKSKYAPDAAARMRYIVNALASHEVHAADYYYRR 199
Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
G YVAAI R QL + +Y A E+A+ ++ +Y L + A + ++ +P +
Sbjct: 200 GAYVAAINRAQLAIKDYKGAPAIEDALHIMILSYGKLNQPELAEDTKRVLAGTFPDSPY 258
>gi|238921073|ref|YP_002934588.1| outer membrane protein assembly complex subunit YfiO [Edwardsiella
ictaluri 93-146]
gi|238870642|gb|ACR70353.1| competence lipoprotein ComL [Edwardsiella ictaluri 93-146]
Length = 245
Score = 92.9 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 54/248 (21%), Positives = 93/248 (37%), Gaps = 17/248 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + + + L G E+Y A L++ NF A
Sbjct: 1 MTRIKYLVAATTLSLALAGCSSS-------KEAVPDNPPAEIYATAQQKLQDGNFKAAIT 53
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV-------- 130
+PF +++ L + Y + A + + +I P S+N+
Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKSADLPMAQATIDRFIRLNPTSQNMSYVLYMRG 113
Query: 131 --DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
D + I D + + S++V+RY NS Y A + +N+
Sbjct: 114 LTDMAMDDSALQGFFGIDRSDRDPEYARQAFRDFSQLVQRYPNSAYTTDATKRLVFLKNR 173
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
LA E+ + R+Y KRG YVA + R + +L NY D + A+ + AY + L EA +
Sbjct: 174 LAKHELAVARFYTKRGAYVAVVNRVEQMLRNYPDTQATRGALPLMENAYRQMGLNGEADK 233
Query: 249 VVSLIQER 256
V +I
Sbjct: 234 VQKIIAFN 241
>gi|269958518|ref|YP_003328305.1| putative DNA uptake lipoprotein ComL [Anaplasma centrale str.
Israel]
gi|269848347|gb|ACZ48991.1| putative DNA uptake lipoprotein ComL [Anaplasma centrale str.
Israel]
Length = 290
Score = 92.9 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 73/242 (30%), Positives = 111/242 (45%), Gaps = 7/242 (2%)
Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
++ V LV + ++YE + KA F++ +P
Sbjct: 9 AVLVALLVFC----ITPPVAAAPLTEEGVHKLYEDGLRLFHSGQHKKAVAIFDKIEALYP 64
Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
F+ +A L++A Y G Y +AASL E YI YP SKN+DY YY+ + + D+
Sbjct: 65 FSQMAIDGSLVAAVSHYELGNYAEAASLAESYIDAYPSSKNIDYAYYVRVTAKYMQVPDL 124
Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
DQ + S V + NS Y+ + + LAA+E IG +YL+RG ++A
Sbjct: 125 GLDQGVALEVRNLASEFVRMFPNSRYLAEVSQRLAAVQQHLAAREFMIGDFYLRRGGFIA 184
Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
AI RF +++ Y D+ +A E + RLVEAY AL A +S + E W E
Sbjct: 185 AIKRFNSLVSGYPDSVYAHEGLYRLVEAYTALGDRQSAAMYLSRLGEN---SPWRVKAER 241
Query: 269 LV 270
L+
Sbjct: 242 LL 243
>gi|260775125|ref|ZP_05884023.1| probable component of the lipoprotein assembly complex (forms a
complex with YaeT YfgL and NlpB) [Vibrio coralliilyticus
ATCC BAA-450]
gi|260608826|gb|EEX34988.1| probable component of the lipoprotein assembly complex (forms a
complex with YaeT YfgL and NlpB) [Vibrio coralliilyticus
ATCC BAA-450]
Length = 241
Score = 92.9 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 57/248 (22%), Positives = 106/248 (42%), Gaps = 19/248 (7%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K L+ +++V LVG + + E+Y +A + L+ N+ A +
Sbjct: 1 MKKHTLSGLLALSV--LVGCSSS-------EEIVPDIPPSELYSEAQISLQSGNWLTAID 51
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+PF + + L + Y + E + P + +D+V Y+ G
Sbjct: 52 KLEALDSRYPFGAYSEQVQLDLIYAYYKNDDLALGLATIERFSRLNPTHEKLDWVLYMRG 111
Query: 139 MSYAQMIRDVPYD----------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
+++ R+ +D K +++ERY NSPY + A+ + +N+
Sbjct: 112 LTHMAQDRNFMHDLFNVDRSDRDPEPVKKAFADFKKLLERYPNSPYAEDAQKRMFALKNR 171
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
LA ++ +YL+R ++AAI R Q + Y D E A +++ +EAY L L D A+
Sbjct: 172 LAEYDLATADFYLRREAWIAAINRTQELQKTYPDTEAARKSLEIQLEAYEKLGLEDAAKR 231
Query: 249 VVSLIQER 256
LI+
Sbjct: 232 TRQLIELN 239
>gi|304414307|ref|ZP_07395675.1| outer membrane protein assembly complex [Candidatus Regiella
insecticola LSR1]
gi|304283521|gb|EFL91917.1| outer membrane protein assembly complex [Candidatus Regiella
insecticola LSR1]
Length = 246
Score = 92.9 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 53/248 (21%), Positives = 100/248 (40%), Gaps = 17/248 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + + +I L+G + V E+Y A L+ NF A
Sbjct: 1 MKRIKYLVATAIWSLLLMGCSNSND-------VVPDSPPTELYTDAQQKLQSGNFQGAIT 53
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+PF+ + + + Y + A + ++ P N+DY+ YL G
Sbjct: 54 QLEALDSRYPFSAYSSQVQFDLIYAYYKSANLSMALVSIDRFMRLNPTHPNIDYMLYLRG 113
Query: 139 MSYAQMIR----------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
++ + D + ++++E Y +S Y ++ + +N+
Sbjct: 114 LTDMALDDSALQGLFGIDRSDRDPIYVLAAFRDFTQLIENYPDSQYATDSQKRLLYLKNR 173
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
LA E++I RYY KRG +VA + R + ++ NY D + +A+ + AY L L ++A +
Sbjct: 174 LAKHELDIARYYTKRGAHVAVVNRIEQMMQNYPDTQATRDALPLMKNAYERLQLNEQADQ 233
Query: 249 VVSLIQER 256
V LI
Sbjct: 234 VAKLIAAN 241
>gi|85711026|ref|ZP_01042086.1| Competence lipoprotein ComL [Idiomarina baltica OS145]
gi|85694939|gb|EAQ32877.1| Competence lipoprotein ComL [Idiomarina baltica OS145]
Length = 252
Score = 92.9 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 55/252 (21%), Positives = 110/252 (43%), Gaps = 14/252 (5%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
K + I + L G + L +YE A + NF++A E
Sbjct: 1 MKRRILILTAAVGLSLAGCSSTDDQQSELKYT----QVELMYESAQDQMSLGNFTQAEEE 56
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
+ + +PF A + L ++ Y ++A + + +I+ P K+VDY Y+ G+
Sbjct: 57 LSNINSRYPFGPFAHQVQLDLIYLNYKLDNTEKALAAIDRFISLNPNHKDVDYALYMRGL 116
Query: 140 SYAQMIRDVPY----------DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
+ + + + D K + + ++ +Y S Y A+ + +++L
Sbjct: 117 TNQRAEYNAIHELAGVDRSDRDSTMAKEAFKDFAELLRKYPESKYAADAKKRMIAIKSRL 176
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
A KE+ + +YY+KR Y+AA R + V+ N+ + E A+A +VE Y L L + ++
Sbjct: 177 AKKELAVAQYYMKRQAYLAAANRGRYVVENFENTPEVESALAMMVECYDQLELEELKQDT 236
Query: 250 VSLIQERYPQGY 261
+ +++ +P
Sbjct: 237 LKVLRSNFPNNE 248
>gi|104783635|ref|YP_610133.1| competence lipoprotein ComL [Pseudomonas entomophila L48]
gi|95112622|emb|CAK17350.1| putative competence lipoprotein ComL [Pseudomonas entomophila L48]
Length = 339
Score = 92.9 bits (228), Expect = 5e-17, Method: Composition-based stats.
Identities = 55/244 (22%), Positives = 99/244 (40%), Gaps = 16/244 (6%)
Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85
+ + + + E+Y++A L +++ A
Sbjct: 6 LLLIAILGLTAACSSNKEVI------DENLSEAELYQQAQADLDNSSYTSAVNKLKALES 59
Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
+PF A ++ L + Y + + A S E +I +P+ NVDY YYL G++
Sbjct: 60 RYPFGRYADQAQLELIYANYKNSEPEAAKSAAERFIRLHPQHPNVDYAYYLKGLTSFDQD 119
Query: 146 R----------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
R D A + +++ R+ NS Y A+ + RN LA+ E+
Sbjct: 120 RGLLARFLPLDMTKRDPGAARDSYNEFAQLTSRFPNSRYSPDAKQRMIYLRNLLASYEIH 179
Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
+ YYL R YVAA R + V+ N+ + + +A +VE+Y + L + A + ++
Sbjct: 180 VANYYLSREAYVAAANRGRYVVENFQETPSVGDGLAVMVESYQHMHLDELAATSLETLKL 239
Query: 256 RYPQ 259
YP
Sbjct: 240 NYPD 243
>gi|331684251|ref|ZP_08384843.1| putative lipoprotein [Escherichia coli H299]
gi|331077866|gb|EGI49072.1| putative lipoprotein [Escherichia coli H299]
Length = 245
Score = 92.5 bits (227), Expect = 5e-17, Method: Composition-based stats.
Identities = 50/248 (20%), Positives = 95/248 (38%), Gaps = 17/248 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + + + FL G E+Y A L++ N+ +A
Sbjct: 1 MTRMKYLVAAATLSLFLAGCSGSKEE-------VPDNPPNEIYATAQQKLQDGNWRQAIT 53
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+PF +++ L + Y A + + +I P N+DYV Y+ G
Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRG 113
Query: 139 MSYAQMIR----------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
++ + D + + S++V Y NS Y A + +++
Sbjct: 114 LTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDR 173
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
LA E + YY +RG +VA + R + +L +Y D + +A+ + AY + L +A +
Sbjct: 174 LAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQLNAQAEK 233
Query: 249 VVSLIQER 256
V +I
Sbjct: 234 VAKIIAAN 241
>gi|325528652|gb|EGD05738.1| competence lipoprotein ComL [Burkholderia sp. TJI49]
Length = 274
Score = 92.5 bits (227), Expect = 5e-17, Method: Composition-based stats.
Identities = 54/239 (22%), Positives = 95/239 (39%), Gaps = 14/239 (5%)
Query: 34 FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93
+ G + T ++Y +A L ++ K +YF PF A
Sbjct: 24 LIAGCHGLPQKQ----DETATWSNNKLYSEAQDALSGGDWGKCAKYFEALQGRDPFGHFA 79
Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM--------- 144
+++ + A+ + + A + +I +P+ ++ Y YYL GM +
Sbjct: 80 QQAQINVAYCNWKDNETAAADQAVDRFIQLHPDHPDIPYAYYLKGMIHFNDDLGLFGRFS 139
Query: 145 -IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
D +A + +V+RY S Y A + N LA+ EV YY +R
Sbjct: 140 GQDMSERDPQALRESYDAFKVVVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRR 199
Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
G YVAAI R QL + +Y A E+A+ ++ +Y L A + ++ +P +
Sbjct: 200 GAYVAAINRAQLAIKDYKGAPAIEDALHIMILSYGKLNQPQLAEDTKRVLAGTFPDSPY 258
>gi|222034299|emb|CAP77040.1| UPF0169 lipoprotein yfiO [Escherichia coli LF82]
Length = 245
Score = 92.5 bits (227), Expect = 5e-17, Method: Composition-based stats.
Identities = 49/248 (19%), Positives = 96/248 (38%), Gaps = 17/248 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + + + FL G E+Y A L++ N+ +A
Sbjct: 1 MTRMKYLVAAATLSLFLAGCSGSKEE-------VPDNPPNEIYATAQQKLQDGNWRQAIT 53
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+PF +++ L + Y A ++ + +I P N+DYV Y+ G
Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAVIDRFIRLNPTHPNIDYVMYMRG 113
Query: 139 MSYAQMIR----------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
++ + D + + S++V Y NS Y A + +++
Sbjct: 114 LTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDR 173
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
LA E + YY +RG +VA + R + +L +Y D + +A+ + AY + + +A +
Sbjct: 174 LAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQMNAQAEK 233
Query: 249 VVSLIQER 256
V +I
Sbjct: 234 VAKIIAAN 241
>gi|218547882|ref|YP_002381673.1| outer membrane protein assembly complex subunit YfiO [Escherichia
fergusonii ATCC 35469]
gi|218355423|emb|CAQ88031.1| putative lipoprotein [Escherichia fergusonii ATCC 35469]
gi|324111236|gb|EGC05218.1| outer membrane assembly lipoprotein YfiO [Escherichia fergusonii
B253]
gi|325496331|gb|EGC94190.1| outer membrane protein assembly complex subunit YfiO [Escherichia
fergusonii ECD227]
Length = 245
Score = 92.5 bits (227), Expect = 5e-17, Method: Composition-based stats.
Identities = 49/252 (19%), Positives = 95/252 (37%), Gaps = 17/252 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + + + FL G E+Y A L++ N+ +A
Sbjct: 1 MTRMKYLVAAATLSLFLAGCSGSKEE-------VPDNPPNEIYATAQQKLQDGNWKQAIT 53
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+PF +++ L + Y A + + +I P N+DYV Y+ G
Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRG 113
Query: 139 MSYAQMIR----------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
++ + D + + S++V Y NS Y A + +++
Sbjct: 114 LTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDR 173
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
LA E + YY +RG +VA + R + +L +Y D + +A+ + AY + + +A +
Sbjct: 174 LAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQMNAQAEK 233
Query: 249 VVSLIQERYPQG 260
V +I
Sbjct: 234 VAKIIATNSSNS 245
>gi|110806534|ref|YP_690054.1| outer membrane protein assembly complex subunit YfiO [Shigella
flexneri 5 str. 8401]
gi|110616082|gb|ABF04749.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
Length = 245
Score = 92.5 bits (227), Expect = 5e-17, Method: Composition-based stats.
Identities = 49/248 (19%), Positives = 94/248 (37%), Gaps = 17/248 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + + + FL G E+Y A L++ N+ +A
Sbjct: 1 MTRMKYLVAAATLSLFLAGCSGSKEE-------VPDNPPNEIYATAQQKLQDGNWRQAIT 53
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+PF +++ L + Y A + + +I P N+DYV Y+ G
Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRG 113
Query: 139 MSYAQMIR----------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
++ + D + + S++V Y NS Y A + + +
Sbjct: 114 LTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKGR 173
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
LA E + YY +RG +VA + R + +L +Y D + +A+ + AY + + +A +
Sbjct: 174 LAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQMNAQAEK 233
Query: 249 VVSLIQER 256
V +I
Sbjct: 234 VAKIIAAN 241
>gi|225023855|ref|ZP_03713047.1| hypothetical protein EIKCOROL_00721 [Eikenella corrodens ATCC
23834]
gi|224943329|gb|EEG24538.1| hypothetical protein EIKCOROL_00721 [Eikenella corrodens ATCC
23834]
Length = 269
Score = 92.5 bits (227), Expect = 5e-17, Method: Composition-based stats.
Identities = 54/255 (21%), Positives = 109/255 (42%), Gaps = 10/255 (3%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
+ + +AV ++ +T ++Y +A ++ +N+S++ +
Sbjct: 1 MKKILLVTGLAVMLSACSSTSTTAVSQDAQITQDWSVDKLYAEAHDEMESRNYSRSVRLY 60
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY-------- 132
FP A +S L +A+V Y + QA + E+++ YP N DY
Sbjct: 61 EILRARFPNTRQAVQSRLDTAYVYYKDEQQPQALAHVEQFLKLYPNHPNTDYALYLKGLI 120
Query: 133 --VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
+ D +A + Q + ++ R+ +S Y AR + + L
Sbjct: 121 VLNQDKSIFNKLASQDWSDRDPKANREAYQVFNELITRFPDSKYANDAREKMARLVDALG 180
Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
E+ I RYY++RG Y+AA R Q +++ Y + + EEA+A ++ AY L + + +
Sbjct: 181 GNEMAIARYYMQRGAYLAAANRAQGIVSRYQNTRYVEEALAIMMTAYARLEKPELSSDTR 240
Query: 251 SLIQERYPQGYWARY 265
++ + +PQ + +
Sbjct: 241 RVLAQNFPQSPYLQK 255
>gi|186475731|ref|YP_001857201.1| putative competence lipoprotein, ComL [Burkholderia phymatum
STM815]
gi|184192190|gb|ACC70155.1| putative competence lipoprotein, ComL [Burkholderia phymatum
STM815]
Length = 285
Score = 92.5 bits (227), Expect = 5e-17, Method: Composition-based stats.
Identities = 53/242 (21%), Positives = 94/242 (38%), Gaps = 14/242 (5%)
Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90
A + + T ++Y +A L +F K +YF PF
Sbjct: 32 AATLVAACHGLPEK----TDETATWTNNKLYTEAQDALSGGDFGKCAKYFEALEGRDPFG 87
Query: 91 GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM------ 144
A+++ + A+ + + A +I +P+ ++ Y YYL GM +
Sbjct: 88 HFAQQAQINVAYCNWKDSETDAADQAVNRFIQLHPDHPDIPYAYYLKGMIHFNDDLGLFG 147
Query: 145 ----IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
D ++ + +V++Y S Y A + N LA+ EV YY
Sbjct: 148 RFSGQDMSERDPKSLRESYDAFKVVVDKYPQSKYAPDAAQRMRYIVNALASHEVHAADYY 207
Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
+RG YVAAI R QL + Y +A E+A+ ++ +Y L A + ++ +P
Sbjct: 208 YRRGAYVAAINRAQLAIKEYKNAPAIEDALHIMMLSYQKLDQPQLAEDTKRVLAGTFPDS 267
Query: 261 YW 262
+
Sbjct: 268 PY 269
>gi|78066564|ref|YP_369333.1| DNA uptake lipoprotein-like [Burkholderia sp. 383]
gi|77967309|gb|ABB08689.1| DNA uptake lipoprotein-like protein [Burkholderia sp. 383]
Length = 274
Score = 92.5 bits (227), Expect = 5e-17, Method: Composition-based stats.
Identities = 53/239 (22%), Positives = 95/239 (39%), Gaps = 14/239 (5%)
Query: 34 FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93
+ G + T ++Y +A L ++ K +YF PF A
Sbjct: 24 LIAGCHGLPQKQ----DETATWSNNKLYSEAQDALSGGDWGKCAKYFESLQGRDPFGHFA 79
Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM--------- 144
+++ + A+ + + A + +I +P+ ++ Y YYL GM +
Sbjct: 80 QQAQINVAYCNWKDNEAAAADQAVDRFIQLHPDHPDIPYAYYLKGMIHFNDDLGLFGRFS 139
Query: 145 -IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
D +A + +V+R+ S Y A + N LA+ EV YY +R
Sbjct: 140 GQDMSERDPQALRESYDAFKVVVDRFPKSKYAPDAAARMRYIVNALASHEVHAADYYYRR 199
Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
G YVAAI R QL + +Y A E+A+ ++ +Y L A + ++ +P +
Sbjct: 200 GAYVAAINRAQLAIKDYKGAPAIEDALHIMILSYGKLNQPQLAEDTKRVLAGTFPDSPY 258
>gi|329120442|ref|ZP_08249107.1| competence lipoprotein ComL [Neisseria bacilliformis ATCC BAA-1200]
gi|327461900|gb|EGF08230.1| competence lipoprotein ComL [Neisseria bacilliformis ATCC BAA-1200]
Length = 267
Score = 92.5 bits (227), Expect = 5e-17, Method: Composition-based stats.
Identities = 53/235 (22%), Positives = 103/235 (43%), Gaps = 11/235 (4%)
Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
+ + D +T ++Y +A L N+++A + + FP A+++
Sbjct: 17 CASKGTSDKDA-QITQDWSVEKLYAEAQDELNSSNYTRAVKLYELLESRFPQGRYAQQAQ 75
Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY----------VYYLVGMSYAQMIRD 147
L +A+ Y + ++A + E + +P+ N+DY ++
Sbjct: 76 LDTAYAYYKDEEREKALAAVERFQKLHPQHPNMDYALYLKGLILFNEDPSFLNKLAAQDW 135
Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
D +A + Q S +V+RY S YV+ A + + LA E+ + RYY KRG Y+
Sbjct: 136 SDRDPKANREAYQAFSELVQRYPQSKYVEDASARMAKLVDALAGNEMAVARYYAKRGAYL 195
Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
AA R Q ++ + + EEA+A + +Y + A + ++Q+ +PQ +
Sbjct: 196 AAANRAQNIVTGFQNTRFVEEALAIMELSYQKMGRPQLAEDTRRILQQNFPQSPY 250
>gi|296135787|ref|YP_003643029.1| outer membrane assembly lipoprotein YfiO [Thiomonas intermedia K12]
gi|295795909|gb|ADG30699.1| outer membrane assembly lipoprotein YfiO [Thiomonas intermedia K12]
Length = 273
Score = 92.5 bits (227), Expect = 5e-17, Method: Composition-based stats.
Identities = 61/267 (22%), Positives = 110/267 (41%), Gaps = 19/267 (7%)
Query: 9 ICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFL 68
+ ++ W +L L ++ + L G S+D T ++Y +A +
Sbjct: 3 VVLYRLWTLRL----LGAAAAVVLLGLAGCASTPSKDE-----TLGWSSAKLYAEAKDEM 53
Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
N K + + + +P+ +A+++L+ A+ Y G+ QA + + ++ YP +
Sbjct: 54 NSGNTDKGVKLYEKLESRYPYGLLAQQALIEIAYGNYKQGERAQALAAADRFLKLYPNNP 113
Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATK----------LMLQYMSRIVERYTNSPYVKGA 178
DYV YL G+ + K + +V R+ S Y A
Sbjct: 114 YTDYVLYLKGLINFNTDQGWFSFLSDQKLYERDQAAAKQSFESFKELVTRFPESKYAPDA 173
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
R + N LA E + +Y +RG YVAA R Q + +Y DA + A+A LV+AY
Sbjct: 174 RQRMRYIVNSLAEYETHVALFYYRRGAYVAAADRAQRAIEHYQDAPANQLALAILVDAYG 233
Query: 239 ALALMDEAREVVSLIQERYPQGYWARY 265
L + + +++ YPQ +
Sbjct: 234 KLGMTQLRDDAERVLKLNYPQSTYLTE 260
>gi|323963905|gb|EGB59398.1| outer membrane assembly lipoprotein YfiO [Escherichia coli M863]
gi|327252301|gb|EGE63973.1| outer membrane assembly lipoprotein YfiO [Escherichia coli STEC_7v]
Length = 245
Score = 92.5 bits (227), Expect = 5e-17, Method: Composition-based stats.
Identities = 49/248 (19%), Positives = 95/248 (38%), Gaps = 17/248 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + + + FL G E+Y A L++ N+ +A
Sbjct: 1 MTRMKYLVAAATLSLFLAGCSGSKEE-------VPDNPPNEIYATAQQKLQDGNWRQAIT 53
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+PF +++ L + Y A + + +I P N+DYV Y+ G
Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRG 113
Query: 139 MSYAQMIR----------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
++ + D + + S++V Y NS Y A + +++
Sbjct: 114 LTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDR 173
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
LA E + YY +RG +VA + R + +L +Y D + +A+ + AY + + +A +
Sbjct: 174 LAKYEYSVAEYYTERGAWVAVVNRVEDMLRDYPDTQATRDALPLMENAYRQMQMNAQAEK 233
Query: 249 VVSLIQER 256
V +I
Sbjct: 234 VAKIIAAN 241
>gi|157148107|ref|YP_001455426.1| outer membrane protein assembly complex subunit YfiO [Citrobacter
koseri ATCC BAA-895]
gi|157085312|gb|ABV14990.1| hypothetical protein CKO_03917 [Citrobacter koseri ATCC BAA-895]
Length = 245
Score = 92.5 bits (227), Expect = 5e-17, Method: Composition-based stats.
Identities = 48/248 (19%), Positives = 94/248 (37%), Gaps = 17/248 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + + + FL G E+Y A L++ N+ +A
Sbjct: 1 MTRMKYLVAAATLSLFLAGCSGSKEE-------VPDNPPNEIYATAQQKLQDGNWKQAIT 53
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+PF +++ L + Y A + + +I P N+DYV Y+ G
Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRG 113
Query: 139 MSYAQMIR----------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
++ + D + + S++V Y NS Y A + +++
Sbjct: 114 LTNMALDDSALQGFFGVDRSDRDPQHARAAFNDFSKLVRSYPNSQYTTDATKRLVFLKDR 173
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
LA E + YY RG +VA + R + +L ++ D + +A+ + AY + + +A +
Sbjct: 174 LAKYEYSVADYYTARGAWVAVVNRVEGMLRDFPDTQATRDALPLMENAYRQMQMTTQADK 233
Query: 249 VVSLIQER 256
V +I
Sbjct: 234 VAKIIAAN 241
>gi|161524653|ref|YP_001579665.1| competence lipoprotein ComL [Burkholderia multivorans ATCC 17616]
gi|189350590|ref|YP_001946218.1| putative lipoprotein [Burkholderia multivorans ATCC 17616]
gi|221198060|ref|ZP_03571106.1| putative competence lipoprotein ComL [Burkholderia multivorans
CGD2M]
gi|221204382|ref|ZP_03577399.1| putative competence lipoprotein ComL [Burkholderia multivorans
CGD2]
gi|221212789|ref|ZP_03585765.1| putative competence lipoprotein ComL [Burkholderia multivorans
CGD1]
gi|160342082|gb|ABX15168.1| competence lipoprotein ComL [Burkholderia multivorans ATCC 17616]
gi|189334612|dbj|BAG43682.1| putative lipoprotein [Burkholderia multivorans ATCC 17616]
gi|221167002|gb|EED99472.1| putative competence lipoprotein ComL [Burkholderia multivorans
CGD1]
gi|221175239|gb|EEE07669.1| putative competence lipoprotein ComL [Burkholderia multivorans
CGD2]
gi|221181992|gb|EEE14393.1| putative competence lipoprotein ComL [Burkholderia multivorans
CGD2M]
Length = 274
Score = 92.5 bits (227), Expect = 6e-17, Method: Composition-based stats.
Identities = 55/236 (23%), Positives = 94/236 (39%), Gaps = 14/236 (5%)
Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
G + T ++Y +A L ++ K +YF PF A+++
Sbjct: 27 GCHGLPQKQ----DETATWSNNKLYSEAQDALSGGDWGKCAKYFEALQGRDPFGHFAQQA 82
Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IR 146
+ A+ + + A + +I +P+ ++ Y YYL GM +
Sbjct: 83 QINVAYCNWKDNEPAAADQAVDRFIQLHPDHPDIAYAYYLKGMIHFNDDLGLFGRFSGQD 142
Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
D +A + +V+RY S Y A + N LA+ EV YY +RG Y
Sbjct: 143 MSERDPQALRESYDAFKVVVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAY 202
Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
VAAI R QL + +Y A E+A+ +V +Y L A + ++ +P +
Sbjct: 203 VAAINRAQLAIKDYKGAPAIEDALHIMVLSYQKLNQPQLAEDTKRVLAGTFPDSPY 258
>gi|183597511|ref|ZP_02959004.1| hypothetical protein PROSTU_00784 [Providencia stuartii ATCC 25827]
gi|188023156|gb|EDU61196.1| hypothetical protein PROSTU_00784 [Providencia stuartii ATCC 25827]
Length = 243
Score = 92.5 bits (227), Expect = 6e-17, Method: Composition-based stats.
Identities = 54/248 (21%), Positives = 102/248 (41%), Gaps = 17/248 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + + + L G + V+ E+Y L++ N+ A +
Sbjct: 1 MIRIKYLVAAATLSLVLTGCSSN-------NEVSPDSTPAEMYSIGQQKLQDGNYKAAIK 53
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+PF A++ L + Y + + A + + ++ P N+DYV Y+ G
Sbjct: 54 QLEALDNRYPFGPYAQQVQLDLIYAYYKSAELPMAIAAIDRFMRLNPTHPNIDYVLYMRG 113
Query: 139 MSYAQMIR----------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
++ + D + ++ + S++V Y NS Y A + +++
Sbjct: 114 LTAMALDDSLLQGFFGVDRSDRDPQHARVAFKDFSQLVRYYPNSLYANDASKRLVYLKDR 173
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
LA ++ + YY KRG YVA + R Q +L +Y D E A+ + AY + L +EA +
Sbjct: 174 LARFDLSVVEYYNKRGAYVAVVNRVQQMLRDYPDTEATRNALKYMEIAYKQMGLDEEANK 233
Query: 249 VVSLIQER 256
V +LI
Sbjct: 234 VANLIAAN 241
>gi|323159116|gb|EFZ45109.1| outer membrane assembly lipoprotein YfiO [Escherichia coli E128010]
Length = 245
Score = 92.5 bits (227), Expect = 6e-17, Method: Composition-based stats.
Identities = 49/248 (19%), Positives = 95/248 (38%), Gaps = 17/248 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + + + FL G E+Y A L++ N+ +A
Sbjct: 1 MTRMKYLVAAATLSLFLAGCSGSKEE-------VPDNPPNEIYATAQQKLQDGNWRQAIT 53
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+PF +++ L + Y A + + +I P N+DYV Y+ G
Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRG 113
Query: 139 MSYAQMIR----------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
++ + D + + S++V Y NS Y A + +++
Sbjct: 114 LTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDR 173
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
LA E + YY +RG +VA + R + +L +Y D + +A+ + AY + + +A +
Sbjct: 174 LAKYEYSVAEYYTERGAWVAVVNRVEGILRDYPDTQATRDALPLMENAYRQMQMNAQAEK 233
Query: 249 VVSLIQER 256
V +I
Sbjct: 234 VAKIIAAN 241
>gi|170765615|ref|ZP_02900426.1| outer membrane assembly lipoprotein YfiO [Escherichia albertii
TW07627]
gi|170124761|gb|EDS93692.1| outer membrane assembly lipoprotein YfiO [Escherichia albertii
TW07627]
Length = 245
Score = 92.5 bits (227), Expect = 6e-17, Method: Composition-based stats.
Identities = 49/248 (19%), Positives = 95/248 (38%), Gaps = 17/248 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + + + FL G E+Y A L++ N+ +A
Sbjct: 1 MTRMKYLVAAATLSLFLAGCSGSKEE-------VPDNPPNEIYATAQQKLQDGNWRQAIT 53
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+PF +++ L + Y A + + +I P N+DYV Y+ G
Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRG 113
Query: 139 MSYAQMIR----------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
++ + D + + S++V Y NS Y A + +++
Sbjct: 114 LTNMALDDSALQGFFGVDRSDRDPQHARAAFNDFSKLVRGYPNSQYTTDATKRLVFLKDR 173
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
LA E + YY +RG +VA + R + +L +Y D + +A+ + AY + + +A +
Sbjct: 174 LAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQMNAQAEK 233
Query: 249 VVSLIQER 256
V +I
Sbjct: 234 VAKIIAAN 241
>gi|15803119|ref|NP_289150.1| outer membrane protein assembly complex subunit YfiO [Escherichia
coli O157:H7 EDL933]
gi|15832712|ref|NP_311485.1| outer membrane protein assembly complex subunit YfiO [Escherichia
coli O157:H7 str. Sakai]
gi|16130516|ref|NP_417086.1| lipoprotein required for OM biogenesis, in BamABCD complex
[Escherichia coli str. K-12 substr. MG1655]
gi|26248958|ref|NP_754998.1| outer membrane protein assembly complex subunit YfiO [Escherichia
coli CFT073]
gi|74313154|ref|YP_311573.1| outer membrane protein assembly complex subunit YfiO [Shigella
sonnei Ss046]
gi|89109397|ref|AP_003177.1| predicted lipoprotein [Escherichia coli str. K-12 substr. W3110]
gi|91211929|ref|YP_541915.1| outer membrane protein assembly complex subunit YfiO [Escherichia
coli UTI89]
gi|117624819|ref|YP_853732.1| outer membrane protein assembly complex subunit YfiO [Escherichia
coli APEC O1]
gi|157155227|ref|YP_001463916.1| outer membrane protein assembly complex subunit YfiO [Escherichia
coli E24377A]
gi|157162071|ref|YP_001459389.1| outer membrane protein assembly complex subunit YfiO [Escherichia
coli HS]
gi|168752064|ref|ZP_02777086.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7
str. EC4113]
gi|168758665|ref|ZP_02783672.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7
str. EC4401]
gi|168762388|ref|ZP_02787395.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7
str. EC4501]
gi|168771701|ref|ZP_02796708.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7
str. EC4486]
gi|168773477|ref|ZP_02798484.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7
str. EC4196]
gi|168789498|ref|ZP_02814505.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7
str. EC869]
gi|168801713|ref|ZP_02826720.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7
str. EC508]
gi|170019126|ref|YP_001724080.1| outer membrane protein assembly complex subunit YfiO [Escherichia
coli ATCC 8739]
gi|170082200|ref|YP_001731520.1| lipoprotein [Escherichia coli str. K-12 substr. DH10B]
gi|170682905|ref|YP_001744780.1| outer membrane protein assembly complex subunit YfiO [Escherichia
coli SMS-3-5]
gi|187732232|ref|YP_001881383.1| outer membrane protein assembly complex subunit YfiO [Shigella
boydii CDC 3083-94]
gi|188492325|ref|ZP_02999595.1| outer membrane assembly lipoprotein YfiO [Escherichia coli 53638]
gi|191169057|ref|ZP_03030820.1| outer membrane assembly lipoprotein YfiO [Escherichia coli B7A]
gi|193064045|ref|ZP_03045130.1| outer membrane assembly lipoprotein YfiO [Escherichia coli E22]
gi|193071696|ref|ZP_03052597.1| outer membrane assembly lipoprotein YfiO [Escherichia coli E110019]
gi|194430166|ref|ZP_03062667.1| outer membrane assembly lipoprotein YfiO [Escherichia coli B171]
gi|194439383|ref|ZP_03071461.1| outer membrane assembly lipoprotein YfiO [Escherichia coli 101-1]
gi|195940190|ref|ZP_03085572.1| outer membrane protein assembly complex subunit YfiO [Escherichia
coli O157:H7 str. EC4024]
gi|208807425|ref|ZP_03249762.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7
str. EC4206]
gi|208813580|ref|ZP_03254909.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7
str. EC4045]
gi|208818633|ref|ZP_03258953.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7
str. EC4042]
gi|209395708|ref|YP_002272068.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7
str. EC4115]
gi|209920072|ref|YP_002294156.1| outer membrane protein assembly complex subunit YfiO [Escherichia
coli SE11]
gi|215487934|ref|YP_002330365.1| outer membrane protein assembly complex subunit YfiO [Escherichia
coli O127:H6 str. E2348/69]
gi|217327021|ref|ZP_03443104.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7
str. TW14588]
gi|218555175|ref|YP_002388088.1| outer membrane protein assembly complex subunit YfiO [Escherichia
coli IAI1]
gi|218559516|ref|YP_002392429.1| outer membrane protein assembly complex subunit YfiO [Escherichia
coli S88]
gi|218690714|ref|YP_002398926.1| outer membrane protein assembly complex subunit YfiO [Escherichia
coli ED1a]
gi|218696220|ref|YP_002403887.1| outer membrane protein assembly complex subunit YfiO [Escherichia
coli 55989]
gi|218701107|ref|YP_002408736.1| outer membrane protein assembly complex subunit YfiO [Escherichia
coli IAI39]
gi|218706097|ref|YP_002413616.1| outer membrane protein assembly complex subunit YfiO [Escherichia
coli UMN026]
gi|227888162|ref|ZP_04005967.1| DNA uptake lipoprotein ComL [Escherichia coli 83972]
gi|237706816|ref|ZP_04537297.1| outer membrane protein assembly complex subunit YfiO [Escherichia
sp. 3_2_53FAA]
gi|238901756|ref|YP_002927552.1| putative lipoprotein [Escherichia coli BW2952]
gi|253772509|ref|YP_003035340.1| outer membrane protein assembly complex subunit YfiO [Escherichia
coli 'BL21-Gold(DE3)pLysS AG']
gi|254037672|ref|ZP_04871730.1| outer membrane assembly lipoprotein YfiO [Escherichia sp. 1_1_43]
gi|254162566|ref|YP_003045674.1| outer membrane protein assembly complex subunit YfiO [Escherichia
coli B str. REL606]
gi|254794543|ref|YP_003079380.1| outer membrane protein assembly complex subunit YfiO [Escherichia
coli O157:H7 str. TW14359]
gi|256019584|ref|ZP_05433449.1| outer membrane protein assembly complex subunit YfiO [Shigella sp.
D9]
gi|256024876|ref|ZP_05438741.1| outer membrane protein assembly complex subunit YfiO [Escherichia
sp. 4_1_40B]
gi|260845277|ref|YP_003223055.1| putative lipoprotein [Escherichia coli O103:H2 str. 12009]
gi|260856685|ref|YP_003230576.1| putative lipoprotein [Escherichia coli O26:H11 str. 11368]
gi|260869277|ref|YP_003235679.1| putative lipoprotein [Escherichia coli O111:H- str. 11128]
gi|261227480|ref|ZP_05941761.1| Lipoprotein required for outer membrane biogenesis [Escherichia
coli O157:H7 str. FRIK2000]
gi|261255674|ref|ZP_05948207.1| putative lipoprotein [Escherichia coli O157:H7 str. FRIK966]
gi|291283868|ref|YP_003500686.1| putative lipoprotein [Escherichia coli O55:H7 str. CB9615]
gi|293406105|ref|ZP_06650031.1| outer membrane protein assembly complex subunit YfiO [Escherichia
coli FVEC1412]
gi|293415868|ref|ZP_06658508.1| outer membrane protein assembly complex subunit YfiO [Escherichia
coli B185]
gi|297516263|ref|ZP_06934649.1| outer membrane protein assembly complex subunit YfiO [Escherichia
coli OP50]
gi|298381837|ref|ZP_06991434.1| outer membrane protein assembly complex subunit YfiO [Escherichia
coli FVEC1302]
gi|300819931|ref|ZP_07100114.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
107-1]
gi|300825128|ref|ZP_07105221.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
119-7]
gi|300900219|ref|ZP_07118405.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
198-1]
gi|300905085|ref|ZP_07122892.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 84-1]
gi|300921139|ref|ZP_07137520.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
115-1]
gi|300922521|ref|ZP_07138630.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
182-1]
gi|300930680|ref|ZP_07146064.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
187-1]
gi|300940368|ref|ZP_07154956.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 21-1]
gi|300948989|ref|ZP_07163045.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
116-1]
gi|300957378|ref|ZP_07169595.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
175-1]
gi|300986848|ref|ZP_07177831.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 45-1]
gi|301024187|ref|ZP_07187894.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
196-1]
gi|301026355|ref|ZP_07189803.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 69-1]
gi|301050464|ref|ZP_07197346.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
185-1]
gi|301305759|ref|ZP_07211846.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
124-1]
gi|301326711|ref|ZP_07220029.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 78-1]
gi|301644037|ref|ZP_07244055.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
146-1]
gi|306812485|ref|ZP_07446683.1| outer membrane protein assembly complex subunit YfiO [Escherichia
coli NC101]
gi|307139316|ref|ZP_07498672.1| outer membrane protein assembly complex subunit YfiO [Escherichia
coli H736]
gi|307315091|ref|ZP_07594675.1| outer membrane assembly lipoprotein YfiO [Escherichia coli W]
gi|309794108|ref|ZP_07688532.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
145-7]
gi|312965510|ref|ZP_07779742.1| conserved hypothetical protein [Escherichia coli 2362-75]
gi|312973161|ref|ZP_07787334.1| conserved hypothetical protein [Escherichia coli 1827-70]
gi|331643312|ref|ZP_08344443.1| putative lipoprotein [Escherichia coli H736]
gi|331648339|ref|ZP_08349427.1| putative lipoprotein [Escherichia coli M605]
gi|331654055|ref|ZP_08355055.1| putative lipoprotein [Escherichia coli M718]
gi|331658745|ref|ZP_08359687.1| putative lipoprotein [Escherichia coli TA206]
gi|331669347|ref|ZP_08370193.1| putative lipoprotein [Escherichia coli TA271]
gi|331674038|ref|ZP_08374800.1| putative lipoprotein [Escherichia coli TA280]
gi|331678589|ref|ZP_08379263.1| putative lipoprotein [Escherichia coli H591]
gi|332280709|ref|ZP_08393122.1| lipoprotein [Shigella sp. D9]
gi|81170861|sp|P0AC04|YFIO_ECO57 RecName: Full=UPF0169 lipoprotein yfiO; Flags: Precursor
gi|81170862|sp|P0AC03|YFIO_ECOL6 RecName: Full=UPF0169 lipoprotein yfiO; Flags: Precursor
gi|81170863|sp|P0AC02|YFIO_ECOLI RecName: Full=UPF0169 lipoprotein yfiO; Flags: Precursor
gi|12517019|gb|AAG57708.1|AE005490_3 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
gi|26109364|gb|AAN81566.1|AE016764_248 Hypothetical lipoprotein yfiO precursor [Escherichia coli CFT073]
gi|1788947|gb|AAC75644.1| lipoprotein required for OM biogenesis, in BamABCD complex
[Escherichia coli str. K-12 substr. MG1655]
gi|1799999|dbj|BAA16480.1| predicted lipoprotein [Escherichia coli str. K12 substr. W3110]
gi|13362929|dbj|BAB36881.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
gi|73856631|gb|AAZ89338.1| conserved hypothetical protein [Shigella sonnei Ss046]
gi|91073503|gb|ABE08384.1| hypothetical protein UTI89_C2928 [Escherichia coli UTI89]
gi|115513943|gb|ABJ02018.1| putative lipoprotein [Escherichia coli APEC O1]
gi|157067751|gb|ABV07006.1| outer membrane assembly lipoprotein YfiO [Escherichia coli HS]
gi|157077257|gb|ABV16965.1| outer membrane assembly lipoprotein YfiO [Escherichia coli E24377A]
gi|169754054|gb|ACA76753.1| conserved hypothetical protein [Escherichia coli ATCC 8739]
gi|169890035|gb|ACB03742.1| predicted lipoprotein [Escherichia coli str. K-12 substr. DH10B]
gi|170520623|gb|ACB18801.1| outer membrane assembly lipoprotein YfiO [Escherichia coli SMS-3-5]
gi|187429224|gb|ACD08498.1| outer membrane assembly lipoprotein YfiO [Shigella boydii CDC
3083-94]
gi|187770689|gb|EDU34533.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7
str. EC4196]
gi|188013996|gb|EDU52118.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7
str. EC4113]
gi|188487524|gb|EDU62627.1| outer membrane assembly lipoprotein YfiO [Escherichia coli 53638]
gi|189354558|gb|EDU72977.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7
str. EC4401]
gi|189359602|gb|EDU78021.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7
str. EC4486]
gi|189367289|gb|EDU85705.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7
str. EC4501]
gi|189370903|gb|EDU89319.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7
str. EC869]
gi|189376189|gb|EDU94605.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7
str. EC508]
gi|190900898|gb|EDV60684.1| outer membrane assembly lipoprotein YfiO [Escherichia coli B7A]
gi|192929280|gb|EDV82889.1| outer membrane assembly lipoprotein YfiO [Escherichia coli E22]
gi|192954991|gb|EDV85493.1| outer membrane assembly lipoprotein YfiO [Escherichia coli E110019]
gi|194411791|gb|EDX28112.1| outer membrane assembly lipoprotein YfiO [Escherichia coli B171]
gi|194421745|gb|EDX37754.1| outer membrane assembly lipoprotein YfiO [Escherichia coli 101-1]
gi|208727226|gb|EDZ76827.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7
str. EC4206]
gi|208734857|gb|EDZ83544.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7
str. EC4045]
gi|208738756|gb|EDZ86438.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7
str. EC4042]
gi|209157108|gb|ACI34541.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7
str. EC4115]
gi|209762668|gb|ACI79646.1| hypothetical protein ECs3458 [Escherichia coli]
gi|209762670|gb|ACI79647.1| hypothetical protein ECs3458 [Escherichia coli]
gi|209762672|gb|ACI79648.1| hypothetical protein ECs3458 [Escherichia coli]
gi|209762674|gb|ACI79649.1| hypothetical protein ECs3458 [Escherichia coli]
gi|209762676|gb|ACI79650.1| hypothetical protein ECs3458 [Escherichia coli]
gi|209913331|dbj|BAG78405.1| putative lipoprotein [Escherichia coli SE11]
gi|215266006|emb|CAS10417.1| predicted lipoprotein [Escherichia coli O127:H6 str. E2348/69]
gi|217319388|gb|EEC27813.1| outer membrane assembly lipoprotein YfiO [Escherichia coli O157:H7
str. TW14588]
gi|218352952|emb|CAU98751.1| putative lipoprotein [Escherichia coli 55989]
gi|218361943|emb|CAQ99545.1| putative lipoprotein [Escherichia coli IAI1]
gi|218366285|emb|CAR04037.1| putative lipoprotein [Escherichia coli S88]
gi|218371093|emb|CAR18922.1| putative lipoprotein [Escherichia coli IAI39]
gi|218428278|emb|CAR09056.1| putative lipoprotein [Escherichia coli ED1a]
gi|218433194|emb|CAR14093.1| putative lipoprotein [Escherichia coli UMN026]
gi|226839296|gb|EEH71317.1| outer membrane assembly lipoprotein YfiO [Escherichia sp. 1_1_43]
gi|226899856|gb|EEH86115.1| outer membrane protein assembly complex subunit YfiO [Escherichia
sp. 3_2_53FAA]
gi|227834802|gb|EEJ45268.1| DNA uptake lipoprotein ComL [Escherichia coli 83972]
gi|238862627|gb|ACR64625.1| predicted lipoprotein [Escherichia coli BW2952]
gi|242378191|emb|CAQ32966.1| BamD, subunit of Outer Membrane Protein Assembly Complex
[Escherichia coli BL21(DE3)]
gi|253323553|gb|ACT28155.1| outer membrane assembly lipoprotein YfiO [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253974467|gb|ACT40138.1| predicted lipoprotein [Escherichia coli B str. REL606]
gi|253978634|gb|ACT44304.1| predicted lipoprotein [Escherichia coli BL21(DE3)]
gi|254593943|gb|ACT73304.1| Lipoprotein required for outer membrane biogenesis [Escherichia
coli O157:H7 str. TW14359]
gi|257755334|dbj|BAI26836.1| predicted lipoprotein [Escherichia coli O26:H11 str. 11368]
gi|257760424|dbj|BAI31921.1| predicted lipoprotein [Escherichia coli O103:H2 str. 12009]
gi|257765633|dbj|BAI37128.1| predicted lipoprotein [Escherichia coli O111:H- str. 11128]
gi|260448329|gb|ACX38751.1| outer membrane assembly lipoprotein YfiO [Escherichia coli DH1]
gi|281179643|dbj|BAI55973.1| putative lipoprotein [Escherichia coli SE15]
gi|284922543|emb|CBG35630.1| putative lipoprotein [Escherichia coli 042]
gi|290763741|gb|ADD57702.1| predicted lipoprotein [Escherichia coli O55:H7 str. CB9615]
gi|291426111|gb|EFE99143.1| outer membrane protein assembly complex subunit YfiO [Escherichia
coli FVEC1412]
gi|291432057|gb|EFF05039.1| outer membrane protein assembly complex subunit YfiO [Escherichia
coli B185]
gi|294489858|gb|ADE88614.1| outer membrane assembly lipoprotein YfiO [Escherichia coli IHE3034]
gi|298276977|gb|EFI18493.1| outer membrane protein assembly complex subunit YfiO [Escherichia
coli FVEC1302]
gi|299880529|gb|EFI88740.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
196-1]
gi|300297835|gb|EFJ54220.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
185-1]
gi|300315881|gb|EFJ65665.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
175-1]
gi|300356254|gb|EFJ72124.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
198-1]
gi|300395570|gb|EFJ79108.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 69-1]
gi|300403012|gb|EFJ86550.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 84-1]
gi|300407858|gb|EFJ91396.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 45-1]
gi|300411912|gb|EFJ95222.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
115-1]
gi|300421133|gb|EFK04444.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
182-1]
gi|300451546|gb|EFK15166.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
116-1]
gi|300454822|gb|EFK18315.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 21-1]
gi|300461454|gb|EFK24947.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
187-1]
gi|300522400|gb|EFK43469.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
119-7]
gi|300527519|gb|EFK48581.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
107-1]
gi|300839013|gb|EFK66773.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
124-1]
gi|300846634|gb|EFK74394.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 78-1]
gi|301077611|gb|EFK92417.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
146-1]
gi|305854523|gb|EFM54961.1| outer membrane protein assembly complex subunit YfiO [Escherichia
coli NC101]
gi|306905520|gb|EFN36054.1| outer membrane assembly lipoprotein YfiO [Escherichia coli W]
gi|307554610|gb|ADN47385.1| outer membrane assembly lipoprotein YfiO [Escherichia coli ABU
83972]
gi|307625853|gb|ADN70157.1| outer membrane protein assembly complex subunit YfiO [Escherichia
coli UM146]
gi|308122013|gb|EFO59275.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
145-7]
gi|309702977|emb|CBJ02308.1| putative lipoprotein [Escherichia coli ETEC H10407]
gi|310333103|gb|EFQ00317.1| conserved hypothetical protein [Escherichia coli 1827-70]
gi|312289930|gb|EFR17818.1| conserved hypothetical protein [Escherichia coli 2362-75]
gi|312947169|gb|ADR27996.1| outer membrane protein assembly complex subunit YfiO [Escherichia
coli O83:H1 str. NRG 857C]
gi|315061910|gb|ADT76237.1| predicted lipoprotein [Escherichia coli W]
gi|315137215|dbj|BAJ44374.1| putative lipoprotein [Escherichia coli DH1]
gi|315253123|gb|EFU33091.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 85-1]
gi|315284806|gb|EFU44251.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
110-3]
gi|315290936|gb|EFU50301.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
153-1]
gi|315298637|gb|EFU57892.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 16-3]
gi|315615336|gb|EFU95970.1| outer membrane assembly lipoprotein YfiO [Escherichia coli 3431]
gi|320177088|gb|EFW52105.1| outer membrane protein assembly complex subunit YfiO [Shigella
dysenteriae CDC 74-1112]
gi|320185009|gb|EFW59791.1| outer membrane protein assembly complex subunit YfiO [Shigella
flexneri CDC 796-83]
gi|320188932|gb|EFW63591.1| outer membrane protein assembly complex subunit YfiO [Escherichia
coli O157:H7 str. EC1212]
gi|320194760|gb|EFW69389.1| outer membrane protein assembly complex subunit YfiO [Escherichia
coli WV_060327]
gi|320198370|gb|EFW72972.1| outer membrane protein assembly complex subunit YfiO [Escherichia
coli EC4100B]
gi|320640779|gb|EFX10277.1| outer membrane biogenesis protein BamD [Escherichia coli O157:H7
str. G5101]
gi|320646124|gb|EFX15069.1| outer membrane biogenesis protein BamD [Escherichia coli O157:H-
str. 493-89]
gi|320651421|gb|EFX19822.1| outer membrane biogenesis protein BamD [Escherichia coli O157:H-
str. H 2687]
gi|320657026|gb|EFX24849.1| outer membrane biogenesis protein BamD [Escherichia coli O55:H7
str. 3256-97 TW 07815]
gi|320662690|gb|EFX30034.1| outer membrane biogenesis protein BamD [Escherichia coli O55:H7
str. USDA 5905]
gi|320667507|gb|EFX34431.1| outer membrane biogenesis protein BamD [Escherichia coli O157:H7
str. LSU-61]
gi|323156251|gb|EFZ42410.1| outer membrane assembly lipoprotein YfiO [Escherichia coli EPECa14]
gi|323167769|gb|EFZ53464.1| outer membrane assembly lipoprotein YfiO [Shigella sonnei 53G]
gi|323173089|gb|EFZ58720.1| outer membrane assembly lipoprotein YfiO [Escherichia coli LT-68]
gi|323177277|gb|EFZ62865.1| outer membrane assembly lipoprotein YfiO [Escherichia coli 1180]
gi|323184528|gb|EFZ69902.1| outer membrane assembly lipoprotein YfiO [Escherichia coli 1357]
gi|323188382|gb|EFZ73673.1| outer membrane assembly lipoprotein YfiO [Escherichia coli RN587/1]
gi|323377509|gb|ADX49777.1| outer membrane assembly lipoprotein YfiO [Escherichia coli KO11]
gi|323935609|gb|EGB31929.1| outer membrane assembly lipoprotein YfiO [Escherichia coli E1520]
gi|323941385|gb|EGB37569.1| outer membrane assembly lipoprotein YfiO [Escherichia coli E482]
gi|323946276|gb|EGB42309.1| outer membrane assembly lipoprotein YfiO [Escherichia coli H120]
gi|323957036|gb|EGB52762.1| outer membrane assembly lipoprotein YfiO [Escherichia coli H263]
gi|323960545|gb|EGB56174.1| outer membrane assembly lipoprotein YfiO [Escherichia coli H489]
gi|323971460|gb|EGB66696.1| outer membrane assembly lipoprotein YfiO [Escherichia coli TA007]
gi|323978452|gb|EGB73536.1| outer membrane assembly lipoprotein YfiO [Escherichia coli TW10509]
gi|324005835|gb|EGB75054.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 57-2]
gi|324016578|gb|EGB85797.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
117-3]
gi|324120054|gb|EGC13930.1| outer membrane assembly lipoprotein YfiO [Escherichia coli E1167]
gi|326344349|gb|EGD68107.1| outer membrane protein assembly complex subunit YfiO [Escherichia
coli O157:H7 str. 1125]
gi|326347718|gb|EGD71435.1| outer membrane protein assembly complex subunit YfiO [Escherichia
coli O157:H7 str. 1044]
gi|330912360|gb|EGH40870.1| putative component of the lipoprotein assembly complex [Escherichia
coli AA86]
gi|331036783|gb|EGI09007.1| putative lipoprotein [Escherichia coli H736]
gi|331042086|gb|EGI14228.1| putative lipoprotein [Escherichia coli M605]
gi|331047437|gb|EGI19514.1| putative lipoprotein [Escherichia coli M718]
gi|331053327|gb|EGI25356.1| putative lipoprotein [Escherichia coli TA206]
gi|331063015|gb|EGI34928.1| putative lipoprotein [Escherichia coli TA271]
gi|331068777|gb|EGI40170.1| putative lipoprotein [Escherichia coli TA280]
gi|331073419|gb|EGI44740.1| putative lipoprotein [Escherichia coli H591]
gi|332103061|gb|EGJ06407.1| lipoprotein [Shigella sp. D9]
gi|332344466|gb|AEE57800.1| conserved hypothetical protein [Escherichia coli UMNK88]
gi|332999361|gb|EGK18946.1| outer membrane assembly lipoprotein YfiO [Shigella flexneri VA-6]
gi|333001155|gb|EGK20725.1| outer membrane assembly lipoprotein YfiO [Shigella flexneri K-272]
gi|333015793|gb|EGK35130.1| outer membrane assembly lipoprotein YfiO [Shigella flexneri K-227]
Length = 245
Score = 92.5 bits (227), Expect = 6e-17, Method: Composition-based stats.
Identities = 49/248 (19%), Positives = 95/248 (38%), Gaps = 17/248 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + + + FL G E+Y A L++ N+ +A
Sbjct: 1 MTRMKYLVAAATLSLFLAGCSGSKEE-------VPDNPPNEIYATAQQKLQDGNWRQAIT 53
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+PF +++ L + Y A + + +I P N+DYV Y+ G
Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRG 113
Query: 139 MSYAQMIR----------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
++ + D + + S++V Y NS Y A + +++
Sbjct: 114 LTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDR 173
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
LA E + YY +RG +VA + R + +L +Y D + +A+ + AY + + +A +
Sbjct: 174 LAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQMNAQAEK 233
Query: 249 VVSLIQER 256
V +I
Sbjct: 234 VAKIIAAN 241
>gi|293411986|ref|ZP_06654709.1| conserved hypothetical protein [Escherichia coli B354]
gi|331664162|ref|ZP_08365071.1| putative lipoprotein [Escherichia coli TA143]
gi|291468757|gb|EFF11248.1| conserved hypothetical protein [Escherichia coli B354]
gi|331058619|gb|EGI30597.1| putative lipoprotein [Escherichia coli TA143]
Length = 245
Score = 92.2 bits (226), Expect = 7e-17, Method: Composition-based stats.
Identities = 49/248 (19%), Positives = 96/248 (38%), Gaps = 17/248 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + + + FL G E+Y A L++ N+ +A
Sbjct: 1 MTRMKYLVAAATLSLFLAGCSGSKEE-------VPDNPPNEIYATAQQKLQDGNWRQAIT 53
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+PF +++ L + Y A + + +I P N+DYV Y+ G
Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRG 113
Query: 139 MSYAQMIR----------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
++ + D + + S++V Y NS Y A + +++
Sbjct: 114 LTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDR 173
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
LA E + +YY +RG +VA + R + +L +Y D + +A+ + AY + + +A +
Sbjct: 174 LAKYEYSVAKYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQMNAQAEK 233
Query: 249 VVSLIQER 256
V +I
Sbjct: 234 VAKIIAAN 241
>gi|82545048|ref|YP_408995.1| outer membrane protein assembly complex subunit YfiO [Shigella
boydii Sb227]
gi|81246459|gb|ABB67167.1| conserved hypothetical protein [Shigella boydii Sb227]
gi|332092137|gb|EGI97215.1| outer membrane assembly lipoprotein YfiO [Shigella boydii 3594-74]
Length = 245
Score = 92.2 bits (226), Expect = 7e-17, Method: Composition-based stats.
Identities = 48/248 (19%), Positives = 95/248 (38%), Gaps = 17/248 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + + + FL G E+Y A L++ N+ +A
Sbjct: 1 MTRMKYLVAAATLSLFLAGCSGSKEE-------VPDNPPNEIYATAQQKLQDGNWRQAIT 53
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+PF +++ L + Y A + + +I P N+DYV Y+ G
Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRG 113
Query: 139 MSYAQMIR----------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
++ + D + + S++V Y NS Y A + +++
Sbjct: 114 LTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDR 173
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
LA E + YY +RG +VA + R + +L +Y D + +A+ + +Y + + +A +
Sbjct: 174 LAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLMENSYRQMQMNAQAEK 233
Query: 249 VVSLIQER 256
V +I
Sbjct: 234 VAKIIAAN 241
>gi|82778019|ref|YP_404368.1| outer membrane protein assembly complex subunit YfiO [Shigella
dysenteriae Sd197]
gi|309789451|ref|ZP_07684037.1| conserved hypothetical protein [Shigella dysenteriae 1617]
gi|81242167|gb|ABB62877.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
gi|308922694|gb|EFP68215.1| conserved hypothetical protein [Shigella dysenteriae 1617]
Length = 245
Score = 92.2 bits (226), Expect = 7e-17, Method: Composition-based stats.
Identities = 50/248 (20%), Positives = 95/248 (38%), Gaps = 17/248 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + + + FL G E+Y A L++ N+ +A
Sbjct: 1 MTRMKYLVAAATLSLFLAGCSGSKEE-------VPDNPPNEIYATAQQKLQDGNWRQAIT 53
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+PF +++ L + Y A + + +I P N+DYV Y+ G
Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRG 113
Query: 139 MSYAQMIR----------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
++ + D + + S++V Y NS Y A + +++
Sbjct: 114 LTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDR 173
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
LA E + YY +RG +VA + R + +L NY D + +A+ + AY + + +A +
Sbjct: 174 LAKYEYSVAEYYTERGAWVAVVNRVEGMLRNYPDTQATRDALPLMENAYRQMQMNAQAEK 233
Query: 249 VVSLIQER 256
V +I
Sbjct: 234 VAKIIAAN 241
>gi|283835693|ref|ZP_06355434.1| competence lipoprotein ComL [Citrobacter youngae ATCC 29220]
gi|291068910|gb|EFE07019.1| competence lipoprotein ComL [Citrobacter youngae ATCC 29220]
Length = 245
Score = 92.2 bits (226), Expect = 7e-17, Method: Composition-based stats.
Identities = 49/248 (19%), Positives = 94/248 (37%), Gaps = 17/248 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + + + FL G E+Y A L++ N+ +A
Sbjct: 1 MTRMKYLVAAATLSLFLAGCSGSKEE-------VPDNPPNEIYATAQQKLQDGNWKQAIT 53
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+PF +++ L + Y A + + +I P N+DYV Y+ G
Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRG 113
Query: 139 MSYAQMIR----------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
++ + D + + S++V Y NS Y A + +++
Sbjct: 114 LTNMALDDSALQGFFGVDRSDRDPQHARAAFNDFSKLVRGYPNSQYTTDATKRLVFLKDR 173
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
LA E + YY RG +VA + R + +L +Y D + +A+ + AY + + +A +
Sbjct: 174 LAKYEYSVAEYYTARGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQMNAQAEK 233
Query: 249 VVSLIQER 256
V +I
Sbjct: 234 VAKIIAAN 241
>gi|238021800|ref|ZP_04602226.1| hypothetical protein GCWU000324_01703 [Kingella oralis ATCC 51147]
gi|237866414|gb|EEP67456.1| hypothetical protein GCWU000324_01703 [Kingella oralis ATCC 51147]
Length = 276
Score = 92.2 bits (226), Expect = 7e-17, Method: Composition-based stats.
Identities = 52/257 (20%), Positives = 99/257 (38%), Gaps = 14/257 (5%)
Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVT----DVRYQREVYEKAVLFLKEQNFSKAYE 78
++ F L G + ++Y +A L +N+ +A +
Sbjct: 6 KKSLLFIALAVALTGCAFKDKAKKVKIDSDTIAAQNWSNDQLYNEARSELNAKNYDRANK 65
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY--- 135
+ +SLL +A+ Y + +A +L + YP S ++DY Y
Sbjct: 66 LYEILRARQAPGRYTEQSLLDAAYAHYKNEEPAKALALLSRFEHNYPASIDMDYALYLRG 125
Query: 136 -------LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
+ D +A + + + +V RY +S Y + AR + +
Sbjct: 126 LVLFDEDQSFLRKLASQDWSDRDPQANRRAYRVFNELVTRYPDSKYAEDARKRMAQLVDA 185
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
L ++ I +YY KRG Y+AA R Q V+ + + EEA+A + Y + A +
Sbjct: 186 LGGHQIAIAKYYAKRGAYLAANNRAQEVIKQFQNTRFVEEALAIMAYTYGKMGNEQSAND 245
Query: 249 VVSLIQERYPQGYWARY 265
++Q+ +PQ + +
Sbjct: 246 TKRVLQQNFPQSPYLQQ 262
>gi|121594196|ref|YP_986092.1| hypothetical protein Ajs_1829 [Acidovorax sp. JS42]
gi|120606276|gb|ABM42016.1| putative transmembrane protein [Acidovorax sp. JS42]
Length = 300
Score = 92.2 bits (226), Expect = 7e-17, Method: Composition-based stats.
Identities = 62/233 (26%), Positives = 95/233 (40%), Gaps = 16/233 (6%)
Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
T ++Y +A L ++ KA + +A+++
Sbjct: 56 CSSTPEDK------TAGWSTDKIYSEARDELNGGSYDKAVPLLEKLEGRAAGTPLAQQAQ 109
Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY----------VYYLVGMSYAQMIRD 147
L A+ QY G+ QA + + ++ +P S DY L S+
Sbjct: 110 LEKAYAQYKGGEKAQAIATLDRFMKLHPASPAYDYALYLKGLVNFNDNLGLFSWLSRQDL 169
Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
DQ+A K + +V R+ S Y AR +T N LA EV + RYY +RG YV
Sbjct: 170 SERDQKAAKDSFESFRELVTRFPESRYTPDARQRMTYIVNSLAQYEVHVARYYYERGAYV 229
Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
AA+ R Q +A+Y D EEA+ LV +Y AL L + ++ YPQ
Sbjct: 230 AAVSRAQSAVADYKDVPATEEALYILVRSYDALGLTQLRDDTRRVMDASYPQS 282
>gi|24113931|ref|NP_708441.1| outer membrane protein assembly complex subunit YfiO [Shigella
flexneri 2a str. 301]
gi|30063990|ref|NP_838161.1| outer membrane protein assembly complex subunit YfiO [Shigella
flexneri 2a str. 2457T]
gi|24053035|gb|AAN44148.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]
gi|30042246|gb|AAP17971.1| hypothetical protein S2828 [Shigella flexneri 2a str. 2457T]
gi|281602001|gb|ADA74985.1| putative lipoprotein [Shigella flexneri 2002017]
gi|313648269|gb|EFS12713.1| hypothetical protein SF2457T_3266 [Shigella flexneri 2a str. 2457T]
gi|332753863|gb|EGJ84240.1| outer membrane assembly lipoprotein YfiO [Shigella flexneri
4343-70]
gi|332754014|gb|EGJ84386.1| outer membrane assembly lipoprotein YfiO [Shigella flexneri K-671]
gi|332755663|gb|EGJ86026.1| outer membrane assembly lipoprotein YfiO [Shigella flexneri
2747-71]
gi|332765570|gb|EGJ95783.1| bamD [Shigella flexneri 2930-71]
gi|332997823|gb|EGK17433.1| outer membrane assembly lipoprotein YfiO [Shigella flexneri K-218]
gi|333015915|gb|EGK35251.1| outer membrane assembly lipoprotein YfiO [Shigella flexneri K-304]
Length = 245
Score = 92.2 bits (226), Expect = 7e-17, Method: Composition-based stats.
Identities = 49/248 (19%), Positives = 95/248 (38%), Gaps = 17/248 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + + + FL G E+Y A L++ N+ +A
Sbjct: 1 MTRMKYLVAAATLSLFLAGCSGSKEE-------VPDNPPNEIYATAQQKLQDGNWRQAIT 53
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+PF +++ L + Y A + + +I P N+DYV Y+ G
Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRG 113
Query: 139 MSYAQMIR----------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
++ + D + + S++V Y NS Y A + +++
Sbjct: 114 LTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDR 173
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
LA E + YY +RG +VA + R + +L +Y D + +A+ + AY + + +A +
Sbjct: 174 LAKYEYSVAEYYTERGAWVAVVNRIEGMLRDYPDTQATRDALPLMENAYRQMQMNAQAEK 233
Query: 249 VVSLIQER 256
V +I
Sbjct: 234 VAKIIAAN 241
>gi|167587071|ref|ZP_02379459.1| DNA uptake lipoprotein-like [Burkholderia ubonensis Bu]
Length = 274
Score = 92.2 bits (226), Expect = 7e-17, Method: Composition-based stats.
Identities = 54/239 (22%), Positives = 94/239 (39%), Gaps = 14/239 (5%)
Query: 34 FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93
+ G + T ++Y +A L ++ K +YF PF A
Sbjct: 24 LIAGCHGLPQKQ----DETATWSNNKLYSEAQDALTGGDWGKCAKYFEALQGRDPFGHFA 79
Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM--------- 144
+++ + A+ + + A + +I +P+ ++ Y YYL GM +
Sbjct: 80 QQAQINVAYCNWKDNEPAAADQAVDRFIQLHPDHPDIPYAYYLKGMIHFNDDLGLFGRFS 139
Query: 145 -IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
D +A + +V+RY S Y A + N LA+ EV YY +R
Sbjct: 140 GQDMSERDPQALRESYDAFKVVVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRR 199
Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
G YVAAI R QL + Y A E+A+ ++ +Y L A + ++ +P +
Sbjct: 200 GAYVAAINRAQLAIKEYKGAPAIEDALHIMILSYDKLQQPQLAEDTKRVLAGTFPDSPY 258
>gi|325921579|ref|ZP_08183424.1| outer membrane assembly lipoprotein YfiO [Xanthomonas gardneri ATCC
19865]
gi|325547933|gb|EGD18942.1| outer membrane assembly lipoprotein YfiO [Xanthomonas gardneri ATCC
19865]
Length = 293
Score = 92.2 bits (226), Expect = 8e-17, Method: Composition-based stats.
Identities = 55/249 (22%), Positives = 107/249 (42%), Gaps = 14/249 (5%)
Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
L + + G R + + ++Y K+ +++ N++ A + +
Sbjct: 13 LIALMLVMAFVVTGCHRGAKNKN----PDEGMPVEQLYGKSHGLMEKGNWAGAEASYKRL 68
Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
+P+ ++++ +A+ QY AGK+ S + +I YP +N+ Y+YYL G++ +
Sbjct: 69 IAQYPYGPYTEQAMIETAYAQYKAGKHDDTVSSVDRFIRTYPTHRNISYLYYLRGLANSN 128
Query: 144 MIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
D + + + + +RY NS Y AR + R+ A E
Sbjct: 129 RDTVFLRRVWSLDPSRRDLSSPQQAYNDFNTVTDRYPNSRYAPDARKRMIELRDVFAQHE 188
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
++ YYL+R +V+A R +L Y + + +A+A L EAY L A + ++
Sbjct: 189 LDNALYYLRRNAWVSAAGRANYLLETYPQSAYQYDAVAVLAEAYTHLGNKTLAADARRVL 248
Query: 254 QERYPQGYW 262
+ PQ W
Sbjct: 249 ELNSPQHPW 257
>gi|16761517|ref|NP_457134.1| outer membrane protein assembly complex subunit YfiO [Salmonella
enterica subsp. enterica serovar Typhi str. CT18]
gi|29142988|ref|NP_806330.1| outer membrane protein assembly complex subunit YfiO [Salmonella
enterica subsp. enterica serovar Typhi str. Ty2]
gi|213051816|ref|ZP_03344694.1| outer membrane protein assembly complex subunit YfiO [Salmonella
enterica subsp. enterica serovar Typhi str. E00-7866]
gi|213424874|ref|ZP_03357624.1| outer membrane protein assembly complex subunit YfiO [Salmonella
enterica subsp. enterica serovar Typhi str. E02-1180]
gi|213850145|ref|ZP_03381043.1| outer membrane protein assembly complex subunit YfiO [Salmonella
enterica subsp. enterica serovar Typhi str. M223]
gi|25306749|pir||AD0832 probable lipoprotein STY2852 [imported] - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|16503818|emb|CAD05843.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Typhi]
gi|29138620|gb|AAO70190.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Typhi str. Ty2]
Length = 245
Score = 92.2 bits (226), Expect = 8e-17, Method: Composition-based stats.
Identities = 50/248 (20%), Positives = 94/248 (37%), Gaps = 17/248 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + + + FL G E+Y A L++ N+ +A
Sbjct: 1 MTRMKYLVAAATLSLFLAGCSGSKEE-------VPDNPPNEIYATAQQKLQDGNWKQAIT 53
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+PF +++ L + Y A + + ++ P N+DYV Y+ G
Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFMRLNPTHPNIDYVMYMRG 113
Query: 139 MSYAQMIR----------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
++ + D + + S++V Y NS Y A + +++
Sbjct: 114 LTNMALDDSVLQGFFGVDRSDRDPQHARAAFNDFSKLVRSYPNSQYTTDATKRLVFLKDR 173
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
LA E + YY RG +VA + R + +L NY D + +A+ + AY + L +A +
Sbjct: 174 LAKYEYSVAEYYTARGAWVAVVNRVEGMLRNYPDTQATRDALPLMENAYRQMQLNAQADK 233
Query: 249 VVSLIQER 256
V +I
Sbjct: 234 VAKIIAAN 241
>gi|188575740|ref|YP_001912669.1| competence lipoprotein [Xanthomonas oryzae pv. oryzae PXO99A]
gi|188520192|gb|ACD58137.1| competence lipoprotein [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 277
Score = 92.2 bits (226), Expect = 8e-17, Method: Composition-based stats.
Identities = 55/244 (22%), Positives = 104/244 (42%), Gaps = 14/244 (5%)
Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
+ + G R + + ++Y KA +++ N++ A F +P
Sbjct: 2 LVMAFVVTGCHRGAKDKN----PDEGMPVEQLYGKAHNLMEKGNWAGAEASFKHLIAQYP 57
Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
+ ++++ SA+ QY AGK+ S + +I YP +N+ Y+YYL G++ +
Sbjct: 58 YGPYTEQAMIESAYAQYKAGKHDDTVSSVDRFIRTYPTHRNIAYLYYLRGLANSNRDTVF 117
Query: 149 PYDQ----------RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
+ + + + +RY NS Y AR + R+ A E++
Sbjct: 118 LRHVWSLDPSRRDLSSPQQAYNDFNTVTDRYPNSRYAADARKRMIELRDVFAQHELDNAL 177
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
YYL+R +V+A R +L Y + + +A+A L EAY L A + +++ P
Sbjct: 178 YYLRRDAWVSAAGRANYLLETYPQSAYQYDAVAVLAEAYTHLGNKTLAADARRVLELNDP 237
Query: 259 QGYW 262
+ W
Sbjct: 238 KHPW 241
>gi|226328714|ref|ZP_03804232.1| hypothetical protein PROPEN_02609 [Proteus penneri ATCC 35198]
gi|225201900|gb|EEG84254.1| hypothetical protein PROPEN_02609 [Proteus penneri ATCC 35198]
Length = 244
Score = 92.2 bits (226), Expect = 8e-17, Method: Composition-based stats.
Identities = 53/248 (21%), Positives = 97/248 (39%), Gaps = 16/248 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + + + L G T E+Y + L + N+ A +
Sbjct: 1 MRRIKYLVAAATVSLLLAGCSSSDKD------ATADMSPSELYSTSQEKLLDGNYGAAIK 54
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+PF +++ L + Y + + A S + ++ P N+DYV Y+ G
Sbjct: 55 QLESLDNRYPFGPYSQQVQLDLIYAYYKSAELPMAISAIDRFMRLNPTHPNIDYVLYMRG 114
Query: 139 MSYAQMIRDVPYDQRATKL----------MLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
++ + + S++V Y +S Y A + +N+
Sbjct: 115 LTAQALDDSALQGFFGIDRSDRDPQHAIVAFKDFSQLVRYYPDSLYAADATKRLVFLKNR 174
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
LA E+ + ++Y KRG YVA I R + ++ +Y D + +A+ + AY L L EA +
Sbjct: 175 LAKYELSVAKFYTKRGAYVAVINRVEQMMRDYPDTQATRDALVYMENAYKELGLTQEAEK 234
Query: 249 VVSLIQER 256
V SLI
Sbjct: 235 VASLIAAN 242
>gi|303257042|ref|ZP_07343056.1| competence lipoprotein ComL [Burkholderiales bacterium 1_1_47]
gi|302860533|gb|EFL83610.1| competence lipoprotein ComL [Burkholderiales bacterium 1_1_47]
Length = 283
Score = 92.2 bits (226), Expect = 8e-17, Method: Composition-based stats.
Identities = 49/248 (19%), Positives = 102/248 (41%), Gaps = 14/248 (5%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + + ++ T+ ++Y +A L E N+ A +
Sbjct: 9 IKRTLTAACLGSVILATTSCSMFKG----VEDPTEGWTADKLYVEARDNLNEGNYETARD 64
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
Y+ + +P+ ++++ + +A+ + G+ QQA ++ + ++ QYPE Y Y+ G
Sbjct: 65 YYQKLEARYPYGRYSQQAQVETAYSYFKEGEPQQAIAVCDRFLRQYPEHPLSPYALYIKG 124
Query: 139 MSYAQMIRDVPYDQRAT----------KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
++ + +V R+ NS Y + AR +
Sbjct: 125 IATLDEDEGWMSYLTRQDLSKRDAQAARDAFDIFKELVLRFPNSRYARDARERMHELVEA 184
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
A E+ +YY R Y+AAI R + VL N+ + AEEA+ + ++Y L + D+A +
Sbjct: 185 QAKYEINTAKYYYVRDAYIAAINRAENVLLNFQTSPQAEEALIIMRDSYNKLGMDDKAAD 244
Query: 249 VVSLIQER 256
+ ++
Sbjct: 245 IQRILDAN 252
>gi|110642758|ref|YP_670488.1| outer membrane protein assembly complex subunit YfiO [Escherichia
coli 536]
gi|191174570|ref|ZP_03036065.1| outer membrane assembly lipoprotein YfiO [Escherichia coli F11]
gi|300976567|ref|ZP_07173519.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
200-1]
gi|110344350|gb|ABG70587.1| hypothetical lipoprotein YfiO precursor [Escherichia coli 536]
gi|190905143|gb|EDV64787.1| outer membrane assembly lipoprotein YfiO [Escherichia coli F11]
gi|300308509|gb|EFJ63029.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS
200-1]
gi|324012461|gb|EGB81680.1| outer membrane assembly lipoprotein YfiO [Escherichia coli MS 60-1]
Length = 245
Score = 92.2 bits (226), Expect = 8e-17, Method: Composition-based stats.
Identities = 49/248 (19%), Positives = 95/248 (38%), Gaps = 17/248 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + + + FL G E+Y A L++ N+ +A
Sbjct: 1 MTRMKYLVAAATLSLFLAGCSGSKEE-------VPDNPPNEIYATAQQKLQDGNWRQAIT 53
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+PF +++ L + Y A + + +I P N+DYV Y+ G
Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRG 113
Query: 139 MSYAQMIR----------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
++ + D + + S++V Y NS Y A + +++
Sbjct: 114 LTNMALDDSALQRFFGVDRSDRDPQHARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDR 173
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
LA E + YY +RG +VA + R + +L +Y D + +A+ + AY + + +A +
Sbjct: 174 LAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQMNAQAEK 233
Query: 249 VVSLIQER 256
V +I
Sbjct: 234 VAKIIAAN 241
>gi|330721663|gb|EGG99674.1| putative component of the lipoprotein assembly complex (forms a
complex with YaeT2C YfgL2C and NlpB) [gamma
proteobacterium IMCC2047]
Length = 286
Score = 91.8 bits (225), Expect = 8e-17, Method: Composition-based stats.
Identities = 56/248 (22%), Positives = 102/248 (41%), Gaps = 16/248 (6%)
Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
+ L G R+ + +E A+ K N+S A E
Sbjct: 6 LKILASLVCLALLLTGCSSNDKREFT------ENSETAFFENAMKASKAGNYSTAIELLE 59
Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
+ +PF ++++ L F Y + Y+ + + +I +P+ +DYVYYL G++
Sbjct: 60 ELESRYPFGRYSQQAQLELIFAYYKSADYESSRATSSRFIRLHPQHLKLDYVYYLKGLAS 119
Query: 142 AQMIRDVPYDQRAT----------KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
Q +D + L ++ R+ +S Y AR + RNQLA
Sbjct: 120 YQQDKDFFDRFLNIETSQRDMGAARQSLVDFGILLNRFPDSQYADEARARMIYLRNQLAE 179
Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
E+ +G+YY+KR ++AA R + V+ NY + +A +++ Y L L D +
Sbjct: 180 HEIHVGQYYIKRKAWIAAANRGRYVVENYPTTPSVPDGLALMIQGYQQLGLTDLVNQTQK 239
Query: 252 LIQERYPQ 259
++ + P
Sbjct: 240 ILSQNAPN 247
>gi|238756472|ref|ZP_04617779.1| hypothetical protein yruck0001_32310 [Yersinia ruckeri ATCC 29473]
gi|238705321|gb|EEP97731.1| hypothetical protein yruck0001_32310 [Yersinia ruckeri ATCC 29473]
Length = 243
Score = 91.8 bits (225), Expect = 8e-17, Method: Composition-based stats.
Identities = 50/248 (20%), Positives = 98/248 (39%), Gaps = 17/248 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + + + L G V E+Y A L++ NF A
Sbjct: 1 MTRMKYLVAAATLSLVLTGCSSNKD-------VVPDNPPSELYATAQQKLQDGNFKGAIT 53
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+PF +++ L + Y + A + + ++ P N+DYV Y+ G
Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKSADLPLAQASIDRFMRLNPTHPNIDYVLYMRG 113
Query: 139 MSYAQMIR----------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
++ + D + K + +++++ + NS Y A+ + +N+
Sbjct: 114 LTDMALDDSALQGFFGIDRSDRDPQHAKAAFRDFNQLIQSHPNSQYATDAQKRLVYLKNR 173
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
LA E+ + YY KRG YVA I R + ++ +Y + +A+ + AY + L +A +
Sbjct: 174 LAKHELAVAEYYTKRGAYVAVINRVEQMMRDYPGTQATRDALPLMENAYKQIQLNAQADK 233
Query: 249 VVSLIQER 256
V +I
Sbjct: 234 VNKVIAAN 241
>gi|294339950|emb|CAZ88313.1| Competence lipoprotein comL precursor [Thiomonas sp. 3As]
Length = 273
Score = 91.8 bits (225), Expect = 8e-17, Method: Composition-based stats.
Identities = 61/267 (22%), Positives = 110/267 (41%), Gaps = 19/267 (7%)
Query: 9 ICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFL 68
+ ++ W +L L ++ + L G S+D T ++Y +A +
Sbjct: 3 VALYRLWTLRL----LGAAAAVVLLGLAGCASTPSKDE-----TLGWSSAKLYAEAKDEM 53
Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
N K + + + +P+ +A+++L+ A+ Y G+ QA + + ++ YP +
Sbjct: 54 NSGNTDKGVKLYEKLESRYPYGLLAQQALIEIAYGNYKQGERAQALAAADRFLKLYPNNP 113
Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATK----------LMLQYMSRIVERYTNSPYVKGA 178
DYV YL G+ + K + +V R+ S Y A
Sbjct: 114 YTDYVLYLKGLINFNTNQGWFSFLSDQKLYERDQAAAKQSFESFKELVTRFPESKYAPDA 173
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
R + N LA E + +Y +RG YVAA R Q + +Y DA + A+A LV+AY
Sbjct: 174 RQRMRYIVNSLAEYETHVALFYYRRGAYVAAADRAQRAIEHYQDAPANQLALAILVDAYG 233
Query: 239 ALALMDEAREVVSLIQERYPQGYWARY 265
L + + +++ YPQ +
Sbjct: 234 KLGMTQLRDDAERVLKLNYPQSTYLTE 260
>gi|223042000|ref|ZP_03612183.1| putative lipoprotein [Actinobacillus minor 202]
gi|240949470|ref|ZP_04753810.1| putative lipoprotein [Actinobacillus minor NM305]
gi|223017198|gb|EEF15627.1| putative lipoprotein [Actinobacillus minor 202]
gi|240296043|gb|EER46704.1| putative lipoprotein [Actinobacillus minor NM305]
Length = 260
Score = 91.8 bits (225), Expect = 8e-17, Method: Composition-based stats.
Identities = 53/249 (21%), Positives = 114/249 (45%), Gaps = 17/249 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ KF +A +VG +++++ + +++Y K +L++ +++ A
Sbjct: 1 MRKFTSLASLILAGLLVVGCSSNANKEL------EEASAQDLYSKGQTYLQDGDYNSAIR 54
Query: 79 YFNQC-SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY-- 135
Y + ++ + ++ L + QY G+Y +A + E ++ YP S +DYV+Y
Sbjct: 55 YLDAVGTKGGQQSQFGEQTQLSLIYAQYKIGEYYKALDIAERFVRAYPNSPQMDYVFYLA 114
Query: 136 --------LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
+ + + + IV+ + NS YV A+ ++ +N
Sbjct: 115 ALSNARLGDNFIQDFFGVNRSSRSTDSVRNAYGSFQTIVKEFPNSKYVPEAQQWMVYLKN 174
Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
+LA E++I ++Y +R YVA R + ++ Y D++ EA+ + +A+ + L D A
Sbjct: 175 RLAEHELQIVKFYDEREAYVAVANRVEEMMNFYPDSKPTLEALPYMQKAFEKMGLNDSAE 234
Query: 248 EVVSLIQER 256
+V S+I+
Sbjct: 235 KVASIIEAN 243
>gi|24375081|ref|NP_719124.1| hypothetical protein SO_3580 [Shewanella oneidensis MR-1]
gi|24349840|gb|AAN56568.1|AE015795_2 conserved hypothetical protein [Shewanella oneidensis MR-1]
Length = 268
Score = 91.8 bits (225), Expect = 8e-17, Method: Composition-based stats.
Identities = 56/253 (22%), Positives = 97/253 (38%), Gaps = 14/253 (5%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+YKF+ + + L S + + E+Y +A ++ N+SKA
Sbjct: 16 MYKFSKGLTLVLFSLALS----ACSSSPEDNDIAAKTSPDELYSQARTSMELGNYSKAVR 71
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
FPF + L + Y + + +I P N+DYVYY+ G
Sbjct: 72 SLEALDSRFPFGPHKTQVQLDLIYAYYKMDDVASGIANIDRFIRLNPTHPNIDYVYYMRG 131
Query: 139 MSYAQMIRDVPYDQRATK----------LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
+ Q + +D + R+++ Y NS Y A+ + +N+
Sbjct: 132 LVNMQADSYLFHDMLNIDRTDRDPKNAQDAFKDFDRLIKTYPNSKYAADAQKRMLSLKNR 191
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
LA +++ YY+K + AA R Q VL Y E A+ + EAY L +
Sbjct: 192 LAKYSIQVAEYYIKMNAWSAAAVRAQSVLETYPGTPSTERALEIMAEAYGELGQNQLKQN 251
Query: 249 VVSLIQERYPQGY 261
V+ ++Q +P
Sbjct: 252 VLMVMQANFPNNE 264
>gi|332088104|gb|EGI93229.1| outer membrane assembly lipoprotein YfiO [Shigella boydii 5216-82]
Length = 245
Score = 91.8 bits (225), Expect = 9e-17, Method: Composition-based stats.
Identities = 49/248 (19%), Positives = 95/248 (38%), Gaps = 17/248 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + + + FL G E+Y A L++ N+ +A
Sbjct: 1 MTRMKYLVAAATLSLFLAGCSGSKEE-------VPDNPPNEIYATAQQKLQDGNWRQAIT 53
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+PF +++ L + Y A + + +I P N+DYV Y+ G
Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRG 113
Query: 139 MSYAQMIR----------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
++ + D + + S++V Y NS Y A + +++
Sbjct: 114 LTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDR 173
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
LA E + YY +RG +VA + R + +L +Y D + +A+ + AY + + +A +
Sbjct: 174 LAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQINAQAEK 233
Query: 249 VVSLIQER 256
V +I
Sbjct: 234 VAKIIAAN 241
>gi|326565267|gb|EGE15452.1| DNA uptake lipoprotein-like protein [Moraxella catarrhalis 12P80B1]
gi|326575839|gb|EGE25762.1| DNA uptake lipoprotein-like protein [Moraxella catarrhalis CO72]
Length = 356
Score = 91.8 bits (225), Expect = 9e-17, Method: Composition-based stats.
Identities = 61/249 (24%), Positives = 101/249 (40%), Gaps = 11/249 (4%)
Query: 22 FALTIFFSIAVCFLVGWERQSS--RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
L A + G + + T + Y++A L + A E
Sbjct: 5 NKLIAAMMAATLTVTGCQSVNGLFDRKADTVETAEKTDAAYYQEASEALDKNQNRNAIEA 64
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
N +P A+++LL + QY A ++ EE+I +YP S++VDY Y+ G+
Sbjct: 65 LNNIRTFYPTGQYAQQALLDLIYAQYKANDFEAVLQSTEEFIHRYPNSRSVDYALYVQGV 124
Query: 140 SYA---------QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
++ D +L + +++ Y +SPYV A + N A
Sbjct: 125 THMGGAPKASRLVRFDQSHRDVTYLRLAFRDFQNLLKHYPDSPYVADAAQRMIAIYNDFA 184
Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
E+ R+Y+KR VAA R + V Y + EA+A L + L L + A++
Sbjct: 185 EHELAAARWYVKRDAMVAAANRAKWVFQYYPQSTGVPEAIAILAYSNQKLGLTETAKQYK 244
Query: 251 SLIQERYPQ 259
L+Q YPQ
Sbjct: 245 QLLQINYPQ 253
Score = 36.7 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 13/90 (14%), Positives = 27/90 (30%)
Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
+ + A + L + + AI + Y ++A++A+ L+ A
Sbjct: 29 DRKADTVETAEKTDAAYYQEASEALDKNQNRNAIEALNNIRTFYPTGQYAQQALLDLIYA 88
Query: 237 YVALALMDEAREVVSLIQERYPQGYWARYV 266
+ + RYP Y
Sbjct: 89 QYKANDFEAVLQSTEEFIHRYPNSRSVDYA 118
>gi|16765979|ref|NP_461594.1| outer membrane protein assembly complex subunit YfiO [Salmonella
enterica subsp. enterica serovar Typhimurium str. LT2]
gi|56414630|ref|YP_151705.1| outer membrane protein assembly complex subunit YfiO [Salmonella
enterica subsp. enterica serovar Paratyphi A str. ATCC
9150]
gi|161502238|ref|YP_001569350.1| outer membrane protein assembly complex subunit YfiO [Salmonella
enterica subsp. arizonae serovar 62:z4,z23:-- str.
RSK2980]
gi|161615593|ref|YP_001589558.1| outer membrane protein assembly complex subunit YfiO [Salmonella
enterica subsp. enterica serovar Paratyphi B str. SPB7]
gi|167553893|ref|ZP_02347636.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA29]
gi|167992441|ref|ZP_02573539.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica
subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
gi|168234183|ref|ZP_02659241.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica
subsp. enterica serovar Kentucky str. CDC 191]
gi|168244684|ref|ZP_02669616.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL486]
gi|168262166|ref|ZP_02684139.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica
subsp. enterica serovar Hadar str. RI_05P066]
gi|168464165|ref|ZP_02698082.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica
subsp. enterica serovar Newport str. SL317]
gi|168822473|ref|ZP_02834473.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica
subsp. enterica serovar Weltevreden str. HI_N05-537]
gi|194444235|ref|YP_002041927.1| outer membrane protein assembly complex subunit YfiO [Salmonella
enterica subsp. enterica serovar Newport str. SL254]
gi|194448106|ref|YP_002046669.1| outer membrane protein assembly complex subunit YfiO [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL476]
gi|194472505|ref|ZP_03078489.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica
subsp. enterica serovar Kentucky str. CVM29188]
gi|197248037|ref|YP_002147566.1| outer membrane protein assembly complex subunit YfiO [Salmonella
enterica subsp. enterica serovar Agona str. SL483]
gi|197263157|ref|ZP_03163231.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA23]
gi|197363557|ref|YP_002143194.1| outer membrane protein assembly complex subunit YfiO [Salmonella
enterica subsp. enterica serovar Paratyphi A str.
AKU_12601]
gi|198241761|ref|YP_002216674.1| outer membrane protein assembly complex subunit YfiO [Salmonella
enterica subsp. enterica serovar Dublin str.
CT_02021853]
gi|200388577|ref|ZP_03215189.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica
subsp. enterica serovar Virchow str. SL491]
gi|204929736|ref|ZP_03220810.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica
subsp. enterica serovar Javiana str. GA_MM04042433]
gi|205353702|ref|YP_002227503.1| outer membrane protein assembly complex subunit YfiO [Salmonella
enterica subsp. enterica serovar Gallinarum str. 287/91]
gi|207858013|ref|YP_002244664.1| outer membrane protein assembly complex subunit YfiO [Salmonella
enterica subsp. enterica serovar Enteritidis str.
P125109]
gi|224584516|ref|YP_002638314.1| outer membrane protein assembly complex subunit YfiO [Salmonella
enterica subsp. enterica serovar Paratyphi C strain
RKS4594]
gi|16421210|gb|AAL21553.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|56128887|gb|AAV78393.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Paratyphi A str. ATCC 9150]
gi|160863585|gb|ABX20208.1| hypothetical protein SARI_00263 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
gi|161364957|gb|ABX68725.1| hypothetical protein SPAB_03374 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194402898|gb|ACF63120.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica
subsp. enterica serovar Newport str. SL254]
gi|194406410|gb|ACF66629.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL476]
gi|194458869|gb|EDX47708.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica
subsp. enterica serovar Kentucky str. CVM29188]
gi|195633350|gb|EDX51764.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica
subsp. enterica serovar Newport str. SL317]
gi|197095034|emb|CAR60580.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Paratyphi A str. AKU_12601]
gi|197211740|gb|ACH49137.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica
subsp. enterica serovar Agona str. SL483]
gi|197241412|gb|EDY24032.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA23]
gi|197936277|gb|ACH73610.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica
subsp. enterica serovar Dublin str. CT_02021853]
gi|199605675|gb|EDZ04220.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica
subsp. enterica serovar Virchow str. SL491]
gi|204321455|gb|EDZ06655.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica
subsp. enterica serovar Javiana str. GA_MM04042433]
gi|205273483|emb|CAR38460.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|205321763|gb|EDZ09602.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA29]
gi|205329289|gb|EDZ16053.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica
subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
gi|205331816|gb|EDZ18580.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica
subsp. enterica serovar Kentucky str. CDC 191]
gi|205336453|gb|EDZ23217.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL486]
gi|205341181|gb|EDZ27945.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica
subsp. enterica serovar Weltevreden str. HI_N05-537]
gi|205349291|gb|EDZ35922.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica
subsp. enterica serovar Hadar str. RI_05P066]
gi|206709816|emb|CAR34168.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|224469043|gb|ACN46873.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
gi|261247857|emb|CBG25686.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Typhimurium str. D23580]
gi|267994804|gb|ACY89689.1| outer membrane protein assembly complex subunit YfiO [Salmonella
enterica subsp. enterica serovar Typhimurium str.
14028S]
gi|301159210|emb|CBW18725.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344]
gi|312913653|dbj|BAJ37627.1| outer membrane protein assembly complex subunit YfiO [Salmonella
enterica subsp. enterica serovar Typhimurium str.
T000240]
gi|320087096|emb|CBY96864.1| UPF0169 lipoprotein CC_1984 Flags: Precursor [Salmonella enterica
subsp. enterica serovar Weltevreden str. 2007-60-3289-1]
gi|321223455|gb|EFX48520.1| putative component of the lipoprotein assembly complex forms a
complex with YaeT, YfgL, and NlpB [Salmonella enterica
subsp. enterica serovar Typhimurium str. TN061786]
gi|323130997|gb|ADX18427.1| outer membrane protein assembly complex subunit YfiO [Salmonella
enterica subsp. enterica serovar Typhimurium str. 4/74]
gi|326624430|gb|EGE30775.1| outer membrane protein assembly complex subunit YfiO [Salmonella
enterica subsp. enterica serovar Dublin str. 3246]
gi|326628808|gb|EGE35151.1| outer membrane protein assembly complex subunit YfiO [Salmonella
enterica subsp. enterica serovar Gallinarum str. 9]
gi|332989588|gb|AEF08571.1| outer membrane protein assembly complex subunit YfiO [Salmonella
enterica subsp. enterica serovar Typhimurium str. UK-1]
Length = 245
Score = 91.8 bits (225), Expect = 9e-17, Method: Composition-based stats.
Identities = 50/248 (20%), Positives = 94/248 (37%), Gaps = 17/248 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + + + FL G E+Y A L++ N+ +A
Sbjct: 1 MTRMKYLVAAATLSLFLAGCSGSKEE-------VPDNPPNEIYATAQQKLQDGNWKQAIT 53
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+PF +++ L + Y A + + ++ P N+DYV Y+ G
Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFMRLNPTHPNIDYVMYMRG 113
Query: 139 MSYAQMIR----------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
++ + D + + S++V Y NS Y A + +++
Sbjct: 114 LTNMALDDSALQGFFGVDRSDRDPQHARAAFNDFSKLVRSYPNSQYTTDATKRLVFLKDR 173
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
LA E + YY RG +VA + R + +L NY D + +A+ + AY + L +A +
Sbjct: 174 LAKYEYSVAEYYTARGAWVAVVNRVEGMLRNYPDTQATRDALPLMENAYRQMQLNAQADK 233
Query: 249 VVSLIQER 256
V +I
Sbjct: 234 VAKIIAAN 241
>gi|308187866|ref|YP_003931997.1| UPF0169 lipoprotein yfiO precursor [Pantoea vagans C9-1]
gi|308058376|gb|ADO10548.1| putative UPF0169 lipoprotein yfiO precursor [Pantoea vagans C9-1]
Length = 274
Score = 91.8 bits (225), Expect = 9e-17, Method: Composition-based stats.
Identities = 50/250 (20%), Positives = 98/250 (39%), Gaps = 17/250 (6%)
Query: 17 YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76
+ + + + + LVG + E+Y A L++ NF A
Sbjct: 30 FVMTRMKHLVAAATLSLALVGCSGSND-------AVPDSPPSEIYATAQQKLQDGNFKAA 82
Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
+ +PF +++ L + Y A + ++ P N+DYV Y+
Sbjct: 83 IKQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIARFMRLNPTHPNIDYVIYM 142
Query: 137 VGMSYAQMIR----------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
G++ + D + + S+++ Y NS Y A+ + +
Sbjct: 143 KGLTDMALDDSALQGFFGIDRSDRDPTHARDAFRDFSQLLRSYPNSQYAADAQKRLVYLK 202
Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
++LA E+ + ++Y KR YVA + R + ++ +Y D + +A+ + AY L L EA
Sbjct: 203 DRLAKYELSVAQFYTKREAYVAVVNRVEGMMRDYPDTQATHDALPLMENAYRNLQLNAEA 262
Query: 247 REVVSLIQER 256
+V +I
Sbjct: 263 DKVAKIIAAN 272
>gi|322656052|gb|EFY52352.1| outer membrane protein assembly complex subunit YfiO [Salmonella
enterica subsp. enterica serovar Montevideo str.
CASC_09SCPH15965]
Length = 245
Score = 91.8 bits (225), Expect = 9e-17, Method: Composition-based stats.
Identities = 50/248 (20%), Positives = 94/248 (37%), Gaps = 17/248 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + + + FL G E+Y A L++ N+ +A
Sbjct: 1 MTRMKYLVAAATLSLFLAGCSGSKEE-------VPDNPPNEIYATAQQKLQDGNWKQAIT 53
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+PF +++ L + Y A + + ++ P N+DYV Y+ G
Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFMRLNPTHPNIDYVMYMRG 113
Query: 139 MSYAQMIR----------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
++ + D + + S++V Y NS Y A + +++
Sbjct: 114 LTNMALDDSALQGFFGVDRSDRDPQHARAAFNDFSKLVRSYPNSQYTTDATKRLVFLKDR 173
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
LA E + YY RG +VA + R + +L NY D + +A+ + AY + L +A +
Sbjct: 174 LAKYEYSVAEYYTARGAWVAVVNRVEGMLRNYPDTQATRDALPLMENAYRQMQLNAQADK 233
Query: 249 VVSLIQER 256
V +I
Sbjct: 234 VAKIIASN 241
>gi|296113273|ref|YP_003627211.1| DNA uptake lipoprotein-like protein [Moraxella catarrhalis RH4]
gi|295920967|gb|ADG61318.1| DNA uptake lipoprotein-like protein [Moraxella catarrhalis RH4]
gi|326570965|gb|EGE20989.1| DNA uptake lipoprotein-like protein [Moraxella catarrhalis BC7]
Length = 356
Score = 91.8 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 61/249 (24%), Positives = 101/249 (40%), Gaps = 11/249 (4%)
Query: 22 FALTIFFSIAVCFLVGWERQSS--RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
L A + G + + T + Y++A L + A E
Sbjct: 5 NKLIAAMMAATLTVTGCQSVNGLFDRKADTVETAEKTDAAYYQEASEALDKNQNRNAIEA 64
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
N +P A+++LL + QY A ++ EE+I +YP S++VDY Y+ G+
Sbjct: 65 LNNIRTFYPTGQYAQQALLDLIYAQYKANDFEAVLQSTEEFIHRYPNSRSVDYALYVQGV 124
Query: 140 SYA---------QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
++ D +L + +++ Y +SPYV A + N A
Sbjct: 125 THMGGAPKASRLVRFDQSHRDVTYLRLAFRDFQNLLKHYPDSPYVADAAQRMIAIYNDFA 184
Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
E+ R+Y+KR VAA R + V Y + EA+A L + L L + A++
Sbjct: 185 EHELAAARWYVKRDAMVAAANRAKWVFQYYPQSTGVPEAIAILAYSNQKLGLTETAKQYK 244
Query: 251 SLIQERYPQ 259
L+Q YPQ
Sbjct: 245 QLLQINYPQ 253
Score = 36.7 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 13/90 (14%), Positives = 27/90 (30%)
Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
+ + A + L + + AI + Y ++A++A+ L+ A
Sbjct: 29 DRKADTVETAEKTDAAYYQEASEALDKNQNRNAIEALNNIRTFYPTGQYAQQALLDLIYA 88
Query: 237 YVALALMDEAREVVSLIQERYPQGYWARYV 266
+ + RYP Y
Sbjct: 89 QYKANDFEAVLQSTEEFIHRYPNSRSVDYA 118
>gi|326562906|gb|EGE13193.1| DNA uptake lipoprotein-like protein [Moraxella catarrhalis 46P47B1]
gi|326563653|gb|EGE13905.1| DNA uptake lipoprotein-like protein [Moraxella catarrhalis
103P14B1]
gi|326573261|gb|EGE23229.1| DNA uptake lipoprotein-like protein [Moraxella catarrhalis
101P30B1]
Length = 356
Score = 91.8 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 61/249 (24%), Positives = 101/249 (40%), Gaps = 11/249 (4%)
Query: 22 FALTIFFSIAVCFLVGWERQSS--RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
L A + G + + T + Y++A L + A E
Sbjct: 5 NKLIAAMMAATLTVTGCQSVNGLFDRKADTVETAEKTDAAYYQEASEALDKNQNRNAIEA 64
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
N +P A+++LL + QY A ++ EE+I +YP S++VDY Y+ G+
Sbjct: 65 LNNIRTFYPTGQYAQQALLDLIYAQYKANDFEAVLQSTEEFIHRYPNSRSVDYALYVQGV 124
Query: 140 SYA---------QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
++ D +L + +++ Y +SPYV A + N A
Sbjct: 125 THMGGAPKASRLVRFDQSHRDVTYLRLAFRDFQNLLKHYPDSPYVADAAQRMIAIYNDFA 184
Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
E+ R+Y+KR VAA R + V Y + EA+A L + L L + A++
Sbjct: 185 EHELAAARWYVKRDAMVAAANRAKWVFQYYPQSTGVPEAIAILAYSNQKLGLTETAKQYK 244
Query: 251 SLIQERYPQ 259
L+Q YPQ
Sbjct: 245 QLLQINYPQ 253
Score = 36.7 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 13/90 (14%), Positives = 27/90 (30%)
Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
+ + A + L + + AI + Y ++A++A+ L+ A
Sbjct: 29 DRKADTVETAEKTDAAYYQEASEALDKNQNRNAIEALNNIRTFYPTGQYAQQALLDLIYA 88
Query: 237 YVALALMDEAREVVSLIQERYPQGYWARYV 266
+ + RYP Y
Sbjct: 89 QYKANDFEAVLQSTEEFIHRYPNSRSVDYA 118
>gi|326570228|gb|EGE20273.1| DNA uptake lipoprotein-like protein [Moraxella catarrhalis BC8]
Length = 356
Score = 91.8 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 61/249 (24%), Positives = 101/249 (40%), Gaps = 11/249 (4%)
Query: 22 FALTIFFSIAVCFLVGWERQSS--RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
L A + G + + T + Y++A L + A E
Sbjct: 5 NKLIAAMMAATLTVTGCQSVNGLFDRKADTVETAEKTDAAYYQEASEALDKNQNRNAIEA 64
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
N +P A+++LL + QY A ++ EE+I +YP S++VDY Y+ G+
Sbjct: 65 LNNIRTFYPTGQYAQQALLDLIYAQYKANDFEAVLQSTEEFIHRYPNSRSVDYALYVQGV 124
Query: 140 SYA---------QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
++ D +L + +++ Y +SPYV A + N A
Sbjct: 125 THMGGAPKASRLVRFDQSHRDVTYLRLAFRDFQNLLKHYPDSPYVADAAQRMIAIYNDFA 184
Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
E+ R+Y+KR VAA R + V Y + EA+A L + L L + A++
Sbjct: 185 EHELAAARWYVKRDAMVAAANRAKWVFQYYPQSTGVPEAIAILAYSNQKLGLTETAKQYK 244
Query: 251 SLIQERYPQ 259
L+Q YPQ
Sbjct: 245 QLLQINYPQ 253
Score = 36.7 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 13/90 (14%), Positives = 27/90 (30%)
Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
+ + A + L + + AI + Y ++A++A+ L+ A
Sbjct: 29 DRKADTVETAEKTDAAYYQEASEALDKNQNRNAIEALNNIRTFYPTGQYAQQALLDLIYA 88
Query: 237 YVALALMDEAREVVSLIQERYPQGYWARYV 266
+ + RYP Y
Sbjct: 89 QYKANDFEAVLQSTEEFIHRYPNSRSVDYA 118
>gi|114771762|ref|ZP_01449155.1| competence lipoprotein ComL, putative [alpha proteobacterium
HTCC2255]
gi|114547578|gb|EAU50469.1| competence lipoprotein ComL, putative [alpha proteobacterium
HTCC2255]
Length = 230
Score = 91.8 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 65/197 (32%), Positives = 107/197 (54%)
Query: 74 SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
++A F R +P++ A+KSLLMSA ++ Y+++ + E Y+ YP + +
Sbjct: 3 AEAASLFAAVERQYPYSEWAKKSLLMSAIANHNGAFYEESRADAERYLDFYPADVDAAHA 62
Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
YL+ +SY I +V DQ T LQ ++ERY NS Y + + + LA E
Sbjct: 63 QYLIALSYYDQIDNVSRDQSVTFSALQAFRTVIERYPNSEYTSPSLLKFDLSLDHLAGAE 122
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+E+GRYYLKRG + AAI RF++V+ + H EA+ RLVE+Y++L L+ A+ +++
Sbjct: 123 MEVGRYYLKRGHFGAAISRFRVVVEEFETTSHTPEALHRLVESYLSLGLIANAQTTGAIL 182
Query: 254 QERYPQGYWARYVETLV 270
+ W + L+
Sbjct: 183 GHNFQASDWYKDTYVLL 199
>gi|322614487|gb|EFY11418.1| outer membrane protein assembly complex subunit YfiO [Salmonella
enterica subsp. enterica serovar Montevideo str.
315996572]
gi|322621448|gb|EFY18301.1| outer membrane protein assembly complex subunit YfiO [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-1]
gi|322624309|gb|EFY21142.1| outer membrane protein assembly complex subunit YfiO [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-3]
gi|322629392|gb|EFY26170.1| outer membrane protein assembly complex subunit YfiO [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-4]
gi|322633632|gb|EFY30374.1| outer membrane protein assembly complex subunit YfiO [Salmonella
enterica subsp. enterica serovar Montevideo str.
515920-1]
gi|322638325|gb|EFY35023.1| outer membrane protein assembly complex subunit YfiO [Salmonella
enterica subsp. enterica serovar Montevideo str.
515920-2]
gi|322639763|gb|EFY36446.1| outer membrane protein assembly complex subunit YfiO [Salmonella
enterica subsp. enterica serovar Montevideo str. 531954]
gi|322647375|gb|EFY43871.1| outer membrane protein assembly complex subunit YfiO [Salmonella
enterica subsp. enterica serovar Montevideo str.
NC_MB110209-0054]
gi|322650455|gb|EFY46865.1| outer membrane protein assembly complex subunit YfiO [Salmonella
enterica subsp. enterica serovar Montevideo str.
OH_2009072675]
gi|322661446|gb|EFY57671.1| outer membrane protein assembly complex subunit YfiO [Salmonella
enterica subsp. enterica serovar Montevideo str. 19N]
gi|322662646|gb|EFY58854.1| outer membrane protein assembly complex subunit YfiO [Salmonella
enterica subsp. enterica serovar Montevideo str.
81038-01]
gi|322667019|gb|EFY63194.1| outer membrane protein assembly complex subunit YfiO [Salmonella
enterica subsp. enterica serovar Montevideo str.
MD_MDA09249507]
gi|322671388|gb|EFY67511.1| outer membrane protein assembly complex subunit YfiO [Salmonella
enterica subsp. enterica serovar Montevideo str. 414877]
gi|322677605|gb|EFY73668.1| outer membrane protein assembly complex subunit YfiO [Salmonella
enterica subsp. enterica serovar Montevideo str. 366867]
gi|322681569|gb|EFY77599.1| outer membrane protein assembly complex subunit YfiO [Salmonella
enterica subsp. enterica serovar Montevideo str. 413180]
gi|322683969|gb|EFY79979.1| outer membrane protein assembly complex subunit YfiO [Salmonella
enterica subsp. enterica serovar Montevideo str. 446600]
gi|323195538|gb|EFZ80716.1| outer membrane protein assembly complex subunit YfiO [Salmonella
enterica subsp. enterica serovar Montevideo str.
609458-1]
gi|323197911|gb|EFZ83034.1| outer membrane protein assembly complex subunit YfiO [Salmonella
enterica subsp. enterica serovar Montevideo str.
556150-1]
gi|323203089|gb|EFZ88121.1| outer membrane protein assembly complex subunit YfiO [Salmonella
enterica subsp. enterica serovar Montevideo str. 609460]
gi|323205330|gb|EFZ90305.1| outer membrane protein assembly complex subunit YfiO [Salmonella
enterica subsp. enterica serovar Montevideo str.
507440-20]
gi|323210520|gb|EFZ95404.1| outer membrane protein assembly complex subunit YfiO [Salmonella
enterica subsp. enterica serovar Montevideo str. 556152]
gi|323218199|gb|EGA02911.1| outer membrane protein assembly complex subunit YfiO [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB101509-0077]
gi|323221535|gb|EGA05948.1| outer membrane protein assembly complex subunit YfiO [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB102109-0047]
gi|323223755|gb|EGA08060.1| outer membrane protein assembly complex subunit YfiO [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB110209-0055]
gi|323230962|gb|EGA15080.1| outer membrane protein assembly complex subunit YfiO [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB111609-0052]
gi|323234686|gb|EGA18772.1| outer membrane protein assembly complex subunit YfiO [Salmonella
enterica subsp. enterica serovar Montevideo str.
2009083312]
gi|323238725|gb|EGA22775.1| outer membrane protein assembly complex subunit YfiO [Salmonella
enterica subsp. enterica serovar Montevideo str.
2009085258]
gi|323241424|gb|EGA25455.1| outer membrane protein assembly complex subunit YfiO [Salmonella
enterica subsp. enterica serovar Montevideo str.
315731156]
gi|323246878|gb|EGA30845.1| outer membrane biogenesis protein BamD [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|323253277|gb|EGA37107.1| outer membrane biogenesis protein BamD [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|323257073|gb|EGA40782.1| outer membrane biogenesis protein BamD [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|323260454|gb|EGA44065.1| outer membrane protein assembly complex subunit YfiO [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008284]
gi|323264489|gb|EGA47995.1| outer membrane biogenesis protein BamD [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|323269624|gb|EGA53077.1| outer membrane biogenesis protein BamD [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
Length = 245
Score = 91.8 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 50/248 (20%), Positives = 94/248 (37%), Gaps = 17/248 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + + + FL G E+Y A L++ N+ +A
Sbjct: 1 MTRMKYLVAAATLSLFLAGCSGSKEE-------VPDNPPNEIYATAQQKLQDGNWKQAIT 53
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+PF +++ L + Y A + + ++ P N+DYV Y+ G
Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFMRLNPTHPNIDYVMYMRG 113
Query: 139 MSYAQMIR----------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
++ + D + + S++V Y NS Y A + +++
Sbjct: 114 LTNMALDDSALQGFFGVDRSDRDPQHARAAFNDFSKLVRSYPNSQYTTDATKRLVFLKDR 173
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
LA E + YY RG +VA + R + +L NY D + +A+ + AY + L +A +
Sbjct: 174 LAKYEYSVAEYYTARGAWVAVVNRVEGMLRNYPDTQATRDALPLMENAYRQMQLNAQADK 233
Query: 249 VVSLIQER 256
V +I
Sbjct: 234 VAKIIASN 241
>gi|326316816|ref|YP_004234488.1| outer membrane assembly lipoprotein YfiO [Acidovorax avenae subsp.
avenae ATCC 19860]
gi|323373652|gb|ADX45921.1| outer membrane assembly lipoprotein YfiO [Acidovorax avenae subsp.
avenae ATCC 19860]
Length = 265
Score = 91.4 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 65/245 (26%), Positives = 104/245 (42%), Gaps = 16/245 (6%)
Query: 34 FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93
L G + T +Y +A L ++ KA F + +A
Sbjct: 17 VLAGCSSTTEDK------TAGWSPNRIYSEARDELNSNSYDKAVPLFEKLEGRAAGTPLA 70
Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY----------VYYLVGMSYAQ 143
+++ L A+ QY G+ QA + + ++ +P S DY L S+
Sbjct: 71 QQAQLEKAYAQYKGGEKAQAIATLDRFMKLHPASPAYDYALYLKGLVNFNDNLGLFSWLS 130
Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
DQ+A K + +V R+ +S Y + A+ +T N LA EV + RYY +R
Sbjct: 131 RQDLSERDQKAAKDSFESFRELVTRFPDSRYARDAQQRMTYIVNSLAQYEVHVARYYYQR 190
Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
G YVAAI R Q+ LA+Y D EEA+ L+++Y AL + + ++ YPQ +
Sbjct: 191 GAYVAAINRAQIALADYKDVPALEEALYILIKSYDALGMTQLRDDAQRVMAASYPQSEYM 250
Query: 264 RYVET 268
R
Sbjct: 251 RNGFK 255
>gi|194435121|ref|ZP_03067357.1| outer membrane assembly lipoprotein YfiO [Shigella dysenteriae
1012]
gi|194416652|gb|EDX32785.1| outer membrane assembly lipoprotein YfiO [Shigella dysenteriae
1012]
gi|332089242|gb|EGI94349.1| outer membrane assembly lipoprotein YfiO [Shigella dysenteriae
155-74]
Length = 245
Score = 91.4 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 50/248 (20%), Positives = 96/248 (38%), Gaps = 17/248 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + + + FL G E+Y A L++ N+ +A
Sbjct: 1 MTRMKYLVAAATLSLFLAGCSGSKEE-------VPDNPPNEIYATAQQKLQDGNWRQAIT 53
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+PF +++ L + Y A + + +I P N+DYV Y+ G
Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRG 113
Query: 139 MSYAQMIR----------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
++ + D + ++ S++V Y NS Y A + +N+
Sbjct: 114 LTNMALDDSALQGFFGVDRSDRDPQHARVAFSDFSKLVRGYPNSQYTTDATKRLVFLKNR 173
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
LA E + YY +RG +VA + R + +L +Y D + +A+ + AY + + +A +
Sbjct: 174 LAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQINAQAEK 233
Query: 249 VVSLIQER 256
V +I
Sbjct: 234 VAKIIAAN 241
>gi|261364921|ref|ZP_05977804.1| competence lipoprotein ComL [Neisseria mucosa ATCC 25996]
gi|288566704|gb|EFC88264.1| competence lipoprotein ComL [Neisseria mucosa ATCC 25996]
Length = 268
Score = 91.4 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 50/238 (21%), Positives = 100/238 (42%), Gaps = 10/238 (4%)
Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
+T ++Y +A L N+++A + + FP A+++
Sbjct: 16 ACASNKGTVDKDAQITQDWNVEKLYAEAHDELNSSNYTRAIKLYEILESRFPNGRYAQQA 75
Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY----------VYYLVGMSYAQMIR 146
L +A+ Y + ++A + + + +P+ N+DY ++
Sbjct: 76 QLDTAYAYYKDDEPEKALAAIDRFQRHHPQHPNMDYALYLKGLVLFNEDQSFLNKLASQD 135
Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
D +A + Q + +V+RY S Y A + + L E+ + RYY+KRG Y
Sbjct: 136 WSDRDPKANRSAYQAFAELVQRYPESKYAADATERMAKLVDALGGNEISVARYYMKRGAY 195
Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
+AA+ R Q ++ Y + + EEA+A + AY L A + +++ +PQ + +
Sbjct: 196 LAAVNRAQKIVERYQNTRYVEEALAMMELAYKKLDKPQLAADTRRVLETNFPQSPFLQ 253
>gi|254426918|ref|ZP_05040625.1| outer membrane assembly lipoprotein YfiO [Alcanivorax sp. DG881]
gi|196193087|gb|EDX88046.1| outer membrane assembly lipoprotein YfiO [Alcanivorax sp. DG881]
Length = 272
Score = 91.4 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 55/247 (22%), Positives = 96/247 (38%), Gaps = 17/247 (6%)
Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
+ V L G + + Y +A ++ +N+ A + + FP
Sbjct: 8 LLCVLILAGCAGN-------PEDRPELTEADQYREASESIESKNYLTAIDQLKELEARFP 60
Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY----------VYYLVG 138
+ A +S L + QY + Y + ++ YP +DY
Sbjct: 61 YGDYAEQSALDLIYAQYKSVDYPATVVAAQRFMRNYPAHPRMDYALYMRGLANFNMEKGL 120
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
D A K + R+V R+ +S Y AR + RNQLA +E+ + R
Sbjct: 121 FDNMVTSDRSSKDMDAAKDAFRDFERLVARFPDSEYSPDARARMVHIRNQLARQELHVAR 180
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
YY +RG VA+I R Q V+ +Y EE +A + + Y L L ++A + +++ +P
Sbjct: 181 YYARRGAIVASINRAQYVVKHYQQTPAVEEGLAIMTKGYQRLELPEQAEKSRAVLALNWP 240
Query: 259 QGYWARY 265
+
Sbjct: 241 DSAFLDD 247
>gi|326560262|gb|EGE10650.1| DNA uptake lipoprotein-like protein [Moraxella catarrhalis 7169]
gi|326566420|gb|EGE16570.1| DNA uptake lipoprotein-like protein [Moraxella catarrhalis BC1]
Length = 356
Score = 91.4 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 61/249 (24%), Positives = 101/249 (40%), Gaps = 11/249 (4%)
Query: 22 FALTIFFSIAVCFLVGWERQSS--RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
L A + G + + T + Y++A L + A E
Sbjct: 5 NKLIAAMMAATLTVTGCQSVNGLFDRKADTVETAEKTDAAYYQEASEALDKNQNRNAIEA 64
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
N +P A+++LL + QY A ++ EE+I +YP S++VDY Y+ G+
Sbjct: 65 LNNIRTFYPTGQYAQQALLDLIYAQYKANDFEAVLQSTEEFIHRYPNSRSVDYALYVQGV 124
Query: 140 SYA---------QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
++ D +L + +++ Y +SPYV A + N A
Sbjct: 125 THMGGAPKASRLVRFDQSHRDVTYLRLAFRDFQNLLKHYPDSPYVADAAQRMIAIYNDFA 184
Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
E+ R+Y+KR VAA R + V Y + EA+A L + L L + A++
Sbjct: 185 EHELAAARWYVKRDAMVAAANRAKWVFQYYPQSTGVPEAIAILAYSNQKLGLTETAKQYK 244
Query: 251 SLIQERYPQ 259
L+Q YPQ
Sbjct: 245 QLLQINYPQ 253
Score = 36.7 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 13/90 (14%), Positives = 27/90 (30%)
Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
+ + A + L + + AI + Y ++A++A+ L+ A
Sbjct: 29 DRKADTVETAEKTDAAYYQEASEALDKNQNRNAIEALNNIRTFYPTGQYAQQALLDLIYA 88
Query: 237 YVALALMDEAREVVSLIQERYPQGYWARYV 266
+ + RYP Y
Sbjct: 89 QYKANDFEAVLQSTEEFIHRYPNSRSVDYA 118
>gi|237746822|ref|ZP_04577302.1| competence lipoprotein ComL [Oxalobacter formigenes HOxBLS]
gi|229378173|gb|EEO28264.1| competence lipoprotein ComL [Oxalobacter formigenes HOxBLS]
Length = 265
Score = 91.4 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 58/225 (25%), Positives = 101/225 (44%), Gaps = 10/225 (4%)
Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106
T ++Y +A ++ N+ KA EY+ + +PF A+++ + A+ Y
Sbjct: 25 EKIDETVSWPAGKLYREAKDEMRSGNYEKAIEYYEKLESRYPFGVYAQQAQIDIAYAYYR 84
Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA----------QMIRDVPYDQRATK 156
+ QA + E +I +P N+DY+YYL G+ D +A +
Sbjct: 85 DNEPAQALAAVERFIKLHPNHPNIDYMYYLRGLINFNDRVGLLNFAFRQDLSERDPKAAQ 144
Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
+V RY +S Y K A + + LA E+ + +YY +RG Y+AA R Q
Sbjct: 145 DAFDSFKLLVTRYPDSVYSKDAIYRMKYLVTMLAKYEIHVAKYYYRRGAYLAAANRAQRA 204
Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
+ NY ++ EEA+ L E+Y L L D + + + ++ +P
Sbjct: 205 INNYPESAVVEEALYILAESYKKLGLYDLSNDADRIFKQNFPDSK 249
>gi|288934029|ref|YP_003438088.1| outer membrane assembly lipoprotein YfiO [Klebsiella variicola
At-22]
gi|288888758|gb|ADC57076.1| outer membrane assembly lipoprotein YfiO [Klebsiella variicola
At-22]
Length = 245
Score = 91.4 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 48/248 (19%), Positives = 96/248 (38%), Gaps = 17/248 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + + + LVG E+Y A L++ N+ +A
Sbjct: 1 MTRMKYLVAAATLSLALVGCSGSKEE-------VPDNPPNEIYATAQQKLQDGNWKQAIT 53
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+PF +++ L + Y A + + ++ P N+DYV Y+ G
Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFMRLNPTHPNIDYVIYMRG 113
Query: 139 MSYAQMIR----------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
++ + D + + S++V Y NS Y A + +++
Sbjct: 114 LTNMALDDSALQGFFGVDRSDRDPQHARDAFNDFSKLVRGYPNSQYATDAFKRMVFLKDR 173
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
LA E+ + YY RG +VA + R + ++ NY D + +A+ ++ AY + + +A +
Sbjct: 174 LAKYELSVVDYYTDRGAWVAVVNRVEGMMRNYPDTQATRDALPKMENAYRQMQMNAQADK 233
Query: 249 VVSLIQER 256
V +I
Sbjct: 234 VAKIIAAN 241
>gi|134295825|ref|YP_001119560.1| competence lipoprotein ComL [Burkholderia vietnamiensis G4]
gi|134138982|gb|ABO54725.1| competence lipoprotein ComL [Burkholderia vietnamiensis G4]
Length = 274
Score = 91.4 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 55/236 (23%), Positives = 94/236 (39%), Gaps = 14/236 (5%)
Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
G + T ++Y +A L ++ K +YF PF A+++
Sbjct: 27 GCHGLPQKQ----DETATWSNNKLYSEAQDALSGGDWGKCAKYFESLQGRDPFGHFAQQA 82
Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IR 146
+ A+ + + A + +I +P+ ++ Y YYL GM +
Sbjct: 83 QINVAYCNWKDNEAAAADQAVDRFIQLHPDHPDIPYAYYLKGMIHFNDDLGLFGRFSGQD 142
Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
D +A + +V+RY S Y A + N LA+ EV YY +RG Y
Sbjct: 143 MSERDPQALRESYDAFKVVVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAY 202
Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
VAAI R QL + +Y A E+A+ +V +Y L A + ++ +P +
Sbjct: 203 VAAINRAQLAIKDYKGAPAIEDALHIMVLSYGKLNQPQLAEDTKRVLAGTFPDSPY 258
>gi|238791394|ref|ZP_04635033.1| hypothetical protein yinte0001_31510 [Yersinia intermedia ATCC
29909]
gi|238729527|gb|EEQ21042.1| hypothetical protein yinte0001_31510 [Yersinia intermedia ATCC
29909]
Length = 240
Score = 91.4 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 55/244 (22%), Positives = 99/244 (40%), Gaps = 17/244 (6%)
Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
+ + L G V E+Y A L++ NF A
Sbjct: 2 KYLVAAATLSLVLTGCSSNKD-------VVPDNPPSELYATAQQKLQDGNFKGAITQLEA 54
Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
+PF +++ L + Y + A + + ++ P N+DYV Y+ G++
Sbjct: 55 LDNRYPFGPYSQQVQLDLIYAYYKSADLPLAQASIDRFMRLNPTHPNIDYVLYMRGLTDM 114
Query: 143 QMIR----------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
+ D + K + +++++ Y NS Y A+ +T +N+LA
Sbjct: 115 ALDDSALQGFFGIDRSDRDPQHAKAAFRDFNQLIQNYPNSQYATDAQKRLTFLKNRLAKH 174
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
E+ + +YY KRG YVA + R + +L +Y D + +A+ + AY L L EA +V +
Sbjct: 175 ELAVAQYYTKRGAYVAVVNRVEQMLRDYPDTQATRDALPLMENAYKQLQLNAEADKVAKI 234
Query: 253 IQER 256
I
Sbjct: 235 IAAN 238
>gi|293448947|ref|ZP_06663368.1| outer membrane protein assembly complex subunit YfiO [Escherichia
coli B088]
gi|291322037|gb|EFE61466.1| outer membrane protein assembly complex subunit YfiO [Escherichia
coli B088]
Length = 245
Score = 91.0 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 48/248 (19%), Positives = 94/248 (37%), Gaps = 17/248 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + + + FL G E+Y A L++ N+ +A
Sbjct: 1 MTRMKYLVAAATLSLFLAGCSGSKEE-------VPDNPPNEIYATAQQKLQDGNWRQAIT 53
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+PF +++ L + Y A + + +I P N+DYV Y+ G
Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRG 113
Query: 139 MSYAQMIR----------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
++ + D + + S++ Y NS Y A + +++
Sbjct: 114 LTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLARGYPNSQYTTDATKRLVFLKDR 173
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
LA E + YY +RG +VA + R + +L +Y D + +A+ + AY + + +A +
Sbjct: 174 LAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQMNAQAEK 233
Query: 249 VVSLIQER 256
V +I
Sbjct: 234 VAKIIAAN 241
>gi|238765379|ref|ZP_04626303.1| hypothetical protein ykris0001_45070 [Yersinia kristensenii ATCC
33638]
gi|238696421|gb|EEP89214.1| hypothetical protein ykris0001_45070 [Yersinia kristensenii ATCC
33638]
Length = 240
Score = 91.0 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 55/244 (22%), Positives = 99/244 (40%), Gaps = 17/244 (6%)
Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
+ + L G V E+Y A L++ NF A
Sbjct: 2 KYLVAAATLSLVLTGCSSNKD-------VVPDNPPSELYATAQQKLQDGNFKGAITQLEA 54
Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
+PF +++ L + Y + A + + ++ P N+DYV Y+ G++
Sbjct: 55 LDNRYPFGPYSQQVQLDLIYAYYKSADLPLAQASIDRFMRLNPTHPNIDYVLYMRGLTDM 114
Query: 143 QMIR----------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
+ D + K + +++++ Y NS Y A+ +T +N+LA
Sbjct: 115 ALDDSALQGFFGIDRSDRDPQHAKAAFRDFNQLIQSYPNSQYATDAQKRLTFLKNRLAKH 174
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
E+ + +YY KRG YVA + R + +L +Y D + +A+ + AY L L EA +V +
Sbjct: 175 ELAVAQYYTKRGAYVAVVNRVEQMLRDYPDTQATRDALPLMENAYKQLQLNAEADKVAKI 234
Query: 253 IQER 256
I
Sbjct: 235 IAAN 238
>gi|237729510|ref|ZP_04559991.1| outer membrane protein assembly complex subunit YfiO [Citrobacter
sp. 30_2]
gi|226908116|gb|EEH94034.1| outer membrane protein assembly complex subunit YfiO [Citrobacter
sp. 30_2]
Length = 245
Score = 91.0 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 49/248 (19%), Positives = 93/248 (37%), Gaps = 17/248 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + + + FL G E+Y A L++ N+ +A
Sbjct: 1 MTRMKYLVAAATLSLFLAGCSGSKEE-------VPDNPPNEIYATAQQKLQDGNWKQAIT 53
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+PF +++ L + Y A + + +I P N+DYV Y+ G
Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRG 113
Query: 139 MSYAQMIR----------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
++ + D + + S++V Y NS Y A + +++
Sbjct: 114 LTNMALDDSALQGFFGVDRSDRDPQHARAAFNDFSKLVRGYPNSQYTTDATKRLVFLKDR 173
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
LA E + YY RG +VA + R + +L +Y D + A+ + AY + + +A +
Sbjct: 174 LAKYEYSVAEYYTARGAWVAVVNRVEGMLRDYPDTQATRNALPLMENAYRQMQMNAQAEK 233
Query: 249 VVSLIQER 256
V +I
Sbjct: 234 VAKIIAAN 241
>gi|290476242|ref|YP_003469142.1| putative lipoprotein with tetratricopeptide repeats (TPR) domain
[Xenorhabdus bovienii SS-2004]
gi|289175575|emb|CBJ82378.1| putative lipoprotein with tetratricopeptide repeats (TPR) domain
[Xenorhabdus bovienii SS-2004]
Length = 244
Score = 91.0 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 53/249 (21%), Positives = 96/249 (38%), Gaps = 17/249 (6%)
Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
+ + + + L G Q ++Y L+E N+ A
Sbjct: 1 MMIRMKYLVAAATLSMVLSGCSNNKD-------AVPDIPQSQIYSAGQKHLQEGNYKGAI 53
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY-- 135
+ +PF ++++ L + Y + ++ A + + ++ P N+DYV Y
Sbjct: 54 KQLESLDNRYPFGPYSQQTQLDLIYAYYKSAEFPMALASIDRFMRLNPTHPNIDYVIYLR 113
Query: 136 --------LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
+ I D + + + +V RY NS Y A + +
Sbjct: 114 ALISQALDDNTLQSFFGIDRSDRDPEHARASFRDFNLLVSRYPNSQYTSDAAKRLVFLKE 173
Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
+LA E+ + +YY KR YVA + R + +L +Y D + EA+ + +Y L LM EA
Sbjct: 174 RLAKYELAVVKYYTKRSAYVAVVSRVEQMLRDYPDTQATREALPYMEASYKELGLMAEAD 233
Query: 248 EVVSLIQER 256
+V LI
Sbjct: 234 KVAKLIAAN 242
>gi|168239431|ref|ZP_02664489.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica
subsp. enterica serovar Schwarzengrund str. SL480]
gi|194736160|ref|YP_002115674.1| outer membrane protein assembly complex subunit YfiO [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
CVM19633]
gi|194711662|gb|ACF90883.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica
subsp. enterica serovar Schwarzengrund str. CVM19633]
gi|197287865|gb|EDY27253.1| outer membrane assembly lipoprotein YfiO [Salmonella enterica
subsp. enterica serovar Schwarzengrund str. SL480]
Length = 245
Score = 91.0 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 49/248 (19%), Positives = 94/248 (37%), Gaps = 17/248 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + + + FL G E+Y A L++ N+ +A
Sbjct: 1 MTRMKYLVAAATLSLFLAGCSGSKEE-------VPDNPPNEIYATAQQKLQDGNWKQAIT 53
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+PF +++ L + Y A + + ++ P N+DYV Y+ G
Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFMRLNPTHPNIDYVMYMRG 113
Query: 139 MSYAQMIR----------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
++ + D + + S++V Y +S Y A + +++
Sbjct: 114 LTNMALDDSALQGFFGVDRSDRDPQHARAAFNDFSKLVRSYPHSQYTTDATKRLVFLKDR 173
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
LA E + YY RG +VA + R + +L NY D + +A+ + AY + L +A +
Sbjct: 174 LAKYEYSVAEYYTARGAWVAVVNRVEGMLRNYPDTQATRDALPLMENAYRQMQLNAQADK 233
Query: 249 VVSLIQER 256
V +I
Sbjct: 234 VAKIIAAN 241
>gi|220933993|ref|YP_002512892.1| putative competence lipoprotein precursor [Thioalkalivibrio sp.
HL-EbGR7]
gi|219995303|gb|ACL71905.1| putative competence lipoprotein precursor [Thioalkalivibrio sp.
HL-EbGR7]
Length = 254
Score = 91.0 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 54/220 (24%), Positives = 97/220 (44%), Gaps = 10/220 (4%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
T ++Y +A L NF +A Y+ FPF+ A+++ L A+ + A +
Sbjct: 27 DPTRDWSASQLYTEARAALDRGNFDQAVSYYESLEARFPFSRFAQQAQLEVAYAYHKADE 86
Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGM----------SYAQMIRDVPYDQRATKLML 159
+ A + + +I P VDY YYL G+ + +
Sbjct: 87 PEMALAAADRFIQINPRHPYVDYAYYLKGLVNANRGQGYLQRWFPRDPSSRNPAHLRQAF 146
Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219
S +V + +S Y + A + RN LAA E+ + +Y++RG ++AA R + V+
Sbjct: 147 DDFSTLVGNFPDSRYAEDAHQRLIYLRNMLAAHELHVANFYMRRGAWLAAAQRARTVIER 206
Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
Y +A+ +A+ +V AY L L D A + + ++ P+
Sbjct: 207 YPEADSNLDALEVMVRAYRELELNDLANDALRVLTLNDPE 246
>gi|238760704|ref|ZP_04621825.1| hypothetical protein yaldo0001_36270 [Yersinia aldovae ATCC 35236]
gi|238701077|gb|EEP93673.1| hypothetical protein yaldo0001_36270 [Yersinia aldovae ATCC 35236]
Length = 240
Score = 91.0 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 54/244 (22%), Positives = 98/244 (40%), Gaps = 17/244 (6%)
Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
+ + L G V E+Y A L++ NF A
Sbjct: 2 KYLVAAATLSLVLTGCSSNKD-------VVPDNPPSELYATAQQKLQDGNFKGAITQLEA 54
Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
+PF +++ L + Y + A + + ++ P N+DYV Y+ G++
Sbjct: 55 LDNRYPFGPYSQQVQLDLIYAYYKSADLPLAQASIDRFMRLNPTHPNIDYVLYMRGLTDM 114
Query: 143 QMIR----------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
+ D + K + +++++ Y NS Y A+ + +N+LA
Sbjct: 115 ALDDSALQGFFGIDRSDRDPQHAKAAFRDFNQLIQSYPNSQYATDAQKRLVFLKNRLAKH 174
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
E+ + +YY KRG YVA + R + +L +Y D + +A+ + AY L L EA +V +
Sbjct: 175 ELAVAQYYTKRGAYVAVVNRVEQMLRDYPDTQATHDALPLMENAYKQLQLNAEADKVAKI 234
Query: 253 IQER 256
I
Sbjct: 235 IAAN 238
>gi|299066638|emb|CBJ37831.1| putative lipoprotein, ComL family, tetratricopeptide repeats (TPR)
domain [Ralstonia solanacearum CMR15]
Length = 244
Score = 91.0 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 55/229 (24%), Positives = 100/229 (43%), Gaps = 10/229 (4%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
T ++Y +A L ++SKA +Y+ + +PF A+++ + +A+ Y G+
Sbjct: 6 DETAGWSANKLYSEAKDALDGGDYSKAVKYYEKLESRYPFGPFAQQAQIETAYANYKDGE 65
Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT----------KLML 159
A + + +I +P +VDY YYL G+ +
Sbjct: 66 TAAALAAVDRFIQLHPNHPSVDYAYYLKGLINFNDNLGWLGRFSNQDLSERDPKAARAAY 125
Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219
++ R+ NS Y A + N +A EV+ RYY +RG Y+AA R Q + +
Sbjct: 126 DAFKTLLARFPNSKYAPDAAQRMQYIVNAMAEHEVQAARYYYRRGAYLAATNRAQEAIKD 185
Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
Y A EE + ++++Y AL + D + +I++ YP + Y +
Sbjct: 186 YDRAPAVEEGLYIMMKSYEALGMKDLRDDTERIIKQNYPNSDYLLYGQR 234
>gi|83719596|ref|YP_442773.1| competence lipoprotein ComL [Burkholderia thailandensis E264]
gi|83653421|gb|ABC37484.1| competence lipoprotein ComL [Burkholderia thailandensis E264]
Length = 313
Score = 91.0 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 54/226 (23%), Positives = 92/226 (40%), Gaps = 10/226 (4%)
Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106
T ++Y +A L ++ K +YF PF A+++ + A+ +
Sbjct: 72 QKSDETATWSNNKLYSEAQDALTGGDWGKCAKYFEALQGRDPFGHFAQQAQINVAYCNWK 131
Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATK 156
+ A + +I +P+ +V Y YYL GM + D +A +
Sbjct: 132 DNETAAADQAVDRFIQLHPDHPDVAYAYYLKGMIHFNDDLGLFGRFSGQDMSERDPQALR 191
Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
+V+RY S Y A + N LA+ EV YY +RG YVAAI R QL
Sbjct: 192 ESYDAFKVVVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLA 251
Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
+ Y +A E+A+ ++ +Y L A + ++ +P +
Sbjct: 252 IKEYKNAPAIEDALHIMMLSYAKLNQPQLADDTKRVLASTFPDSPY 297
>gi|206890303|ref|YP_002248672.1| tetratricopeptide repeat domain protein [Thermodesulfovibrio
yellowstonii DSM 11347]
gi|206742241|gb|ACI21298.1| tetratricopeptide repeat domain protein [Thermodesulfovibrio
yellowstonii DSM 11347]
Length = 248
Score = 91.0 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 54/249 (21%), Positives = 107/249 (42%), Gaps = 6/249 (2%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + + V L+ + + +KA + ++ + +A +
Sbjct: 1 MKILFKFLIITAIVSLLLSCGGKEAVKKEEFDPVVYL------KKADELVSKKEYEEARK 54
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+ A + L A + + A + +I YPES Y Y +G
Sbjct: 55 LLLEIKNRESAKEYAPLAQLKIADSYLKEDEPELAITEYRRFIELYPESTYAPYAQYSIG 114
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
M+Y + I + L ++ + Y PY + RN +A E+ IG+
Sbjct: 115 MAYFRQIEGPERGAGTAQKALNEFLKLEKMYPRHPYGDILPLRIQKCRNIIAEGELIIGK 174
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
+Y K+G Y AAI RF+ ++ NY D ++ +E + LV++Y L ++D+A++ + L++E++P
Sbjct: 175 FYHKKGSYTAAIGRFEGIVKNYPDFKNLDETLYLLVDSYKNLNMLDKAKQYLKLLKEKFP 234
Query: 259 QGYWARYVE 267
+A+ E
Sbjct: 235 DSQFAKKAE 243
>gi|319425421|gb|ADV53495.1| beta barrel protein translocation component, BamC [Shewanella
putrefaciens 200]
Length = 253
Score = 91.0 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 56/253 (22%), Positives = 99/253 (39%), Gaps = 14/253 (5%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+YKF+ + + L S + + +Y +A ++ N++KA
Sbjct: 1 MYKFSKGVTLVLFSLALS----ACSSSPDDNDIAAKTSPDVLYSQARTSMELGNYAKAVR 56
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
FPF + L + Y + + +I P N+DYVYY+ G
Sbjct: 57 SLEALDSRFPFGPHKTQVQLDLIYAYYKMDDVASGIANIDRFIRLNPTHPNIDYVYYMRG 116
Query: 139 MSYAQMIRDVPYDQ----------RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
+ Q + +D + + + R+++ Y NS Y A+ + +N+
Sbjct: 117 LVNMQADNYLFHDMLSIDRTDRDPKNAQDAFKDFDRLIKTYPNSKYAADAQKRMFSLKNR 176
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
LA +++ YYLK + AA R Q VL Y E A+ ++EAY L +
Sbjct: 177 LAKYSIQVAEYYLKMNAWSAAAIRAQSVLETYPGTPSTERALEIMIEAYGELGQNQLKQN 236
Query: 249 VVSLIQERYPQGY 261
V+ ++Q YP
Sbjct: 237 VLMVMQANYPNNE 249
>gi|152971445|ref|YP_001336554.1| outer membrane protein assembly complex subunit YfiO [Klebsiella
pneumoniae subsp. pneumoniae MGH 78578]
gi|206576804|ref|YP_002237067.1| outer membrane assembly lipoprotein YfiO [Klebsiella pneumoniae
342]
gi|238896041|ref|YP_002920777.1| outer membrane protein assembly complex subunit YfiO [Klebsiella
pneumoniae NTUH-K2044]
gi|262043839|ref|ZP_06016929.1| competence lipoprotein ComL [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|290510911|ref|ZP_06550280.1| lipoprotein [Klebsiella sp. 1_1_55]
gi|330012969|ref|ZP_08307539.1| outer membrane assembly lipoprotein YfiO [Klebsiella sp. MS 92-3]
gi|150956294|gb|ABR78324.1| putative lipoprotein [Klebsiella pneumoniae subsp. pneumoniae MGH
78578]
gi|206565862|gb|ACI07638.1| outer membrane assembly lipoprotein YfiO [Klebsiella pneumoniae
342]
gi|238548359|dbj|BAH64710.1| putative lipoprotein [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|259038809|gb|EEW39990.1| competence lipoprotein ComL [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|289775904|gb|EFD83903.1| lipoprotein [Klebsiella sp. 1_1_55]
gi|328533635|gb|EGF60347.1| outer membrane assembly lipoprotein YfiO [Klebsiella sp. MS 92-3]
Length = 245
Score = 91.0 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 48/248 (19%), Positives = 96/248 (38%), Gaps = 17/248 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + + + LVG E+Y A L++ N+ +A
Sbjct: 1 MTRMKYLVAAATLSLALVGCSGSKEE-------VPDNPPNEIYATAQQKLQDGNWKQAIT 53
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+PF +++ L + Y A + + ++ P N+DYV Y+ G
Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFMRLNPTHPNIDYVIYMRG 113
Query: 139 MSYAQMIR----------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
++ + D + + S++V Y NS Y A + +++
Sbjct: 114 LTNMALDDSALQGFFGVDRSDRDPQHARDAFNDFSKLVRGYPNSQYATDAYKRMVFLKDR 173
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
LA E+ + YY RG +VA + R + ++ NY D + +A+ ++ AY + + +A +
Sbjct: 174 LAKYELSVVDYYTDRGAWVAVVNRVEGMMRNYPDTQATRDALPKMENAYRQMQMNAQADK 233
Query: 249 VVSLIQER 256
V +I
Sbjct: 234 VAKIIAAN 241
>gi|238752928|ref|ZP_04614390.1| hypothetical protein yrohd0001_38840 [Yersinia rohdei ATCC 43380]
gi|238708836|gb|EEQ01092.1| hypothetical protein yrohd0001_38840 [Yersinia rohdei ATCC 43380]
Length = 240
Score = 90.6 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 53/244 (21%), Positives = 98/244 (40%), Gaps = 17/244 (6%)
Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
+ + L G V E+Y A L++ NF A
Sbjct: 2 KYLVAAATLSLVLTGCSSNKD-------VVPDNPPSELYATAQQKLQDGNFKGAITQLEA 54
Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
+PF +++ L + Y + A + + ++ P N+DYV Y+ G++
Sbjct: 55 LDNRYPFGPYSQQVQLDLIYAYYKSADLPLAQASIDRFMRLNPTHPNIDYVLYMRGLTDM 114
Query: 143 QMIR----------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
+ D + K + +++++ Y NS Y A+ + +++LA
Sbjct: 115 ALDDSALQGFFGIDRSDRDPQHAKAAFRDFNQLIQSYPNSQYATDAQKRLMFLKDRLAKH 174
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
E+ + +YY KRG YVA + R + +L +Y D + +A+ + AY L L EA +V +
Sbjct: 175 ELAVAQYYTKRGAYVAVVNRVEQMLRDYPDTQATRDALPLMENAYKQLQLTAEADKVAKI 234
Query: 253 IQER 256
I
Sbjct: 235 IAAN 238
>gi|76811535|ref|YP_333729.1| competence lipoprotein ComL [Burkholderia pseudomallei 1710b]
gi|76580988|gb|ABA50463.1| competence lipoprotein ComL [Burkholderia pseudomallei 1710b]
Length = 313
Score = 90.6 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 54/226 (23%), Positives = 92/226 (40%), Gaps = 10/226 (4%)
Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106
T ++Y +A L ++ K +YF PF A+++ + A+ +
Sbjct: 72 QKSDETATWSNNKLYSEAQDALTGGDWGKCAKYFEALQGRDPFGHFAQQAQINVAYCNWK 131
Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATK 156
+ A + +I +P+ +V Y YYL GM + D +A +
Sbjct: 132 DNETAAADQAVDRFIQLHPDHPDVAYAYYLKGMIHFNDDLGLFGRFSGQDMSERDPQALR 191
Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
+V+RY S Y A + N LA+ EV YY +RG YVAAI R QL
Sbjct: 192 ESYDAFKVVVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLA 251
Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
+ Y +A E+A+ ++ +Y L A + ++ +P +
Sbjct: 252 IKEYKNAPAIEDALHIMMLSYAKLNQPQLADDTKRVLASTFPDSPY 297
>gi|117921610|ref|YP_870802.1| putative lipoprotein [Shewanella sp. ANA-3]
gi|117613942|gb|ABK49396.1| putative lipoprotein [Shewanella sp. ANA-3]
Length = 282
Score = 90.6 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 58/275 (21%), Positives = 102/275 (37%), Gaps = 19/275 (6%)
Query: 2 SAVLGRAICIFEAWAYQ-----LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRY 56
+ R + F Y+ +YKF+ + + L S + +
Sbjct: 8 CFLFYREMEKFLTTTYKELNSSMYKFSKGLTLVLFSLALS----ACSSSPEDNDIAAKTS 63
Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
+Y +A ++ N+SKA FPF + L + Y +
Sbjct: 64 PDVLYSQARTSMELGNYSKAVRSLEALDSRFPFGPHKTQVQLDLIYAYYKMDDVASGIAN 123
Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK----------LMLQYMSRIV 166
+ +I P N+DYVYY+ G+ Q + +D + R++
Sbjct: 124 IDRFIRLNPTHPNIDYVYYMRGLVNMQADSYLFHDMLNIDRTDRDPKNAQDAFKDFDRLI 183
Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
+ Y NS Y A+ + +N+LA +++ YY+K + AA R Q VL Y
Sbjct: 184 KTYPNSKYAADAQKRMLSLKNRLAKYSIQVAEYYIKMNAWSAAAVRAQSVLETYPGTPST 243
Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
E A+ + EAY L + V+ ++Q +P
Sbjct: 244 ERALEIMAEAYGELGQNQLKQNVLMVMQANFPNNE 278
>gi|285017489|ref|YP_003375200.1| lipoprotein precursor [Xanthomonas albilineans GPE PC73]
gi|283472707|emb|CBA15212.1| putative lipoprotein precursor [Xanthomonas albilineans]
Length = 291
Score = 90.6 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 59/249 (23%), Positives = 104/249 (41%), Gaps = 16/249 (6%)
Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
+ + G R + ++Y+K ++ N+S A F +
Sbjct: 14 FIALLLVTLVVATGCHRHKKD------PEEGMPVEQLYQKGHAQMESGNWSGADHSFKRL 67
Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
+P+ ++++ SA+ QY AGK+ A S + +I YP +N+ Y+YYL G+S +
Sbjct: 68 IAQYPYGQYTEQAMIESAYAQYKAGKHDDAVSTIDRFIRTYPTQRNIAYMYYLRGLSNSN 127
Query: 144 MIRDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
D + + + +RY NS Y AR + RN A E
Sbjct: 128 RDTVFLRRLWSLDPSRRDLSTPQQAYADFNTVTDRYPNSRYAADARERMIALRNVFAQHE 187
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
++ YYL+RG +V+A R +L Y + +A+A L +AY L A + ++
Sbjct: 188 LDNALYYLRRGAWVSATSRANYLLETYPQSAFQYDAVAVLADAYTHLGNKALAADARRVL 247
Query: 254 QERYPQGYW 262
+ P+ W
Sbjct: 248 ELNDPKHPW 256
>gi|120599939|ref|YP_964513.1| putative lipoprotein [Shewanella sp. W3-18-1]
gi|146292125|ref|YP_001182549.1| putative lipoprotein [Shewanella putrefaciens CN-32]
gi|120560032|gb|ABM25959.1| putative lipoprotein [Shewanella sp. W3-18-1]
gi|145563815|gb|ABP74750.1| putative lipoprotein [Shewanella putrefaciens CN-32]
Length = 253
Score = 90.6 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 56/253 (22%), Positives = 98/253 (38%), Gaps = 14/253 (5%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+YKF+ + + L S + +Y +A ++ N++KA
Sbjct: 1 MYKFSKGVTLVLFSLALS----ACSSSPDDSDIAAKTSPDVLYSQARTSMELGNYAKAVR 56
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
FPF + L + Y + + +I P N+DYVYY+ G
Sbjct: 57 SLEALDSRFPFGPHKTQVQLDLIYAYYKMDDVASGIANIDRFIRLNPTHPNIDYVYYMRG 116
Query: 139 MSYAQMIRDVPYDQ----------RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
+ Q + +D + + + R+++ Y NS Y A+ + +N+
Sbjct: 117 LVNMQADNYLFHDMLSIDRTDRDPKNAQDAFKDFDRLIKTYPNSKYAADAQKRMFSLKNR 176
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
LA +++ YYLK + AA R Q VL Y E A+ ++EAY L +
Sbjct: 177 LAKYSIQVAEYYLKMNAWSAAAIRAQSVLETYPGTPSTERALEIMIEAYGELGQNQLKQN 236
Query: 249 VVSLIQERYPQGY 261
V+ ++Q YP
Sbjct: 237 VLMVMQANYPNNE 249
>gi|113971329|ref|YP_735122.1| putative lipoprotein [Shewanella sp. MR-4]
gi|114048566|ref|YP_739116.1| putative lipoprotein [Shewanella sp. MR-7]
gi|113886013|gb|ABI40065.1| putative lipoprotein [Shewanella sp. MR-4]
gi|113890008|gb|ABI44059.1| putative lipoprotein [Shewanella sp. MR-7]
Length = 282
Score = 90.6 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 58/275 (21%), Positives = 102/275 (37%), Gaps = 19/275 (6%)
Query: 2 SAVLGRAICIFEAWAYQ-----LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRY 56
+ R + F Y+ +YKF+ + + L S + +
Sbjct: 8 CFLFYREMEKFLTTTYKELNSSMYKFSKGLTLVLFSLALS----ACSSSPEDNDIAAKTS 63
Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
+Y +A ++ N+SKA FPF + L + Y +
Sbjct: 64 PDVLYSQARTSMELGNYSKAVRSLEALDSRFPFGPHKTQVQLDLIYAYYKMDDVASGIAN 123
Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK----------LMLQYMSRIV 166
+ +I P ++DYVYY+ G+ Q + +D + R++
Sbjct: 124 IDRFIRLNPTHPDIDYVYYMRGLVNMQADSYLFHDMLNIDRTDRDPKNAQDAFKDFDRLI 183
Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
+ Y NS Y A+ + +N+LA +++ YYLK + AA R Q VL Y
Sbjct: 184 KTYPNSKYAADAQKRMLSLKNRLAKYSIQVAEYYLKMNAWSAAAVRAQSVLETYPGTPST 243
Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
E A+ + EAY L + V+ ++Q +P
Sbjct: 244 ERALEIMAEAYGELGQNQLKQNVLMVMQANFPNNE 278
>gi|254517172|ref|ZP_05129230.1| competence protein ComL [gamma proteobacterium NOR5-3]
gi|219674677|gb|EED31045.1| competence protein ComL [gamma proteobacterium NOR5-3]
Length = 280
Score = 90.6 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 56/237 (23%), Positives = 99/237 (41%), Gaps = 14/237 (5%)
Query: 33 CFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV 92
F+ G + ++++Y++A +L +NF A +PF
Sbjct: 1 MFVGGCANNDEDG----DIAADSGEQQIYDEAQRYLNARNFDLAIRALQALESRYPFGRY 56
Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL----------VGMSYA 142
A ++ L + Y A + A + +I +P+ NVDY YY+ +S
Sbjct: 57 AEQAQLELIYAHYGAYSPEAAIEAADRFIRLHPQHPNVDYAYYMKGLATATASQDFLSRF 116
Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
D K S++V R+ NSPY A+ + RN LA E+ + YY +
Sbjct: 117 TPTDKTLRDTSFAKEAFAEFSQLVTRFPNSPYASDAKSRMVYLRNLLARNEIHVANYYFR 176
Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
RG Y+AA R + V+ N+ + +A + + Y+ L + D A+ + + YP+
Sbjct: 177 RGAYLAAANRGRYVVENFQGTPAVGDGLAVMAQGYLILGMNDLAQNAIDTLALNYPE 233
>gi|115351783|ref|YP_773622.1| competence lipoprotein ComL [Burkholderia ambifaria AMMD]
gi|170703043|ref|ZP_02893870.1| competence lipoprotein ComL [Burkholderia ambifaria IOP40-10]
gi|171320447|ref|ZP_02909480.1| competence lipoprotein ComL [Burkholderia ambifaria MEX-5]
gi|172060754|ref|YP_001808406.1| competence lipoprotein ComL [Burkholderia ambifaria MC40-6]
gi|115281771|gb|ABI87288.1| competence lipoprotein ComL [Burkholderia ambifaria AMMD]
gi|170132051|gb|EDT00552.1| competence lipoprotein ComL [Burkholderia ambifaria IOP40-10]
gi|171094307|gb|EDT39381.1| competence lipoprotein ComL [Burkholderia ambifaria MEX-5]
gi|171993271|gb|ACB64190.1| competence lipoprotein ComL [Burkholderia ambifaria MC40-6]
Length = 274
Score = 90.6 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 54/236 (22%), Positives = 94/236 (39%), Gaps = 14/236 (5%)
Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
G + T ++Y +A L ++ K +YF PF A+++
Sbjct: 27 GCHGLPQKQ----DETATWSNNKLYSEAQDALSGGDWGKCAKYFESLQGRDPFGHFAQQA 82
Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IR 146
+ A+ + + A + +I +P+ ++ Y YYL GM +
Sbjct: 83 QINVAYCNWKDNEAAAADQAVDRFIQLHPDHPDIPYAYYLKGMIHFNDDLGLFGRFSGQD 142
Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
D +A + +V+RY S Y A + N LA+ EV YY +RG Y
Sbjct: 143 MSERDPQALRESYDAFKVVVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAY 202
Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
VAAI R QL + +Y A E+A+ ++ +Y L A + ++ +P +
Sbjct: 203 VAAINRAQLAIKDYKGAPAIEDALHIMILSYGKLNQPQLAEDTKRVLAGTFPDSPY 258
>gi|289824163|ref|ZP_06543758.1| outer membrane protein assembly complex subunit YfiO [Salmonella
enterica subsp. enterica serovar Typhi str. E98-3139]
Length = 269
Score = 90.6 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 50/248 (20%), Positives = 94/248 (37%), Gaps = 17/248 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + + + FL G E+Y A L++ N+ +A
Sbjct: 1 MTRMKYLVAAATLSLFLAGCSGSKEE-------VPDNPPNEIYATAQQKLQDGNWKQAIT 53
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+PF +++ L + Y A + + ++ P N+DYV Y+ G
Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFMRLNPTHPNIDYVMYMRG 113
Query: 139 MSYAQMIR----------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
++ + D + + S++V Y NS Y A + +++
Sbjct: 114 LTNMALDDSVLQGFFGVDRSDRDPQHARAAFNDFSKLVRSYPNSQYTTDATKRLVFLKDR 173
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
LA E + YY RG +VA + R + +L NY D + +A+ + AY + L +A +
Sbjct: 174 LAKYEYSVAEYYTARGAWVAVVNRVEGMLRNYPDTQATRDALPLMENAYRQMQLNAQADK 233
Query: 249 VVSLIQER 256
V +I
Sbjct: 234 VAKIIAAN 241
>gi|124267193|ref|YP_001021197.1| putative transmembrane protein [Methylibium petroleiphilum PM1]
gi|124259968|gb|ABM94962.1| putative transmembrane protein [Methylibium petroleiphilum PM1]
Length = 274
Score = 90.6 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 58/244 (23%), Positives = 100/244 (40%), Gaps = 16/244 (6%)
Query: 32 VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91
L+G + S ++YE+A N+ +A + + +
Sbjct: 24 SIGLIGCAGGPKDEFAGKSTD------KLYEEARDEAANGNWERASKLYEKLEARTAGTQ 77
Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ-------- 143
A+++ + A+ Y + QA S E +I +P S +DY YYL G+
Sbjct: 78 QAQQTQIDLAYAYYKTNEKAQALSTIERFIKLHPSSPAIDYAYYLQGLINFNENLGLLGG 137
Query: 144 --MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
DQ+A + Q ++ ++ NS Y A+ + N LA EV + RYY
Sbjct: 138 LARQDLSERDQQAARDAYQSFRQLTLQFPNSKYTPDAQLRMNYIVNTLATYEVHVARYYY 197
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
+RG YVAA R Q + + A EEA+ L +Y L L + + ++Q +P+
Sbjct: 198 RRGAYVAAANRAQQAVQEFQRAPATEEALYILGISYDKLGLTELRDDAQRVLQTNFPESR 257
Query: 262 WARY 265
+ +
Sbjct: 258 YVKD 261
>gi|304399172|ref|ZP_07381039.1| outer membrane assembly lipoprotein YfiO [Pantoea sp. aB]
gi|304353226|gb|EFM17606.1| outer membrane assembly lipoprotein YfiO [Pantoea sp. aB]
Length = 243
Score = 90.2 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 50/248 (20%), Positives = 97/248 (39%), Gaps = 17/248 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + + + LVG + E+Y A L++ NF A +
Sbjct: 1 MTRMKHLVAAATLSLALVGCSGSND-------AVPDNPPSEIYATAQQKLQDGNFKAAIK 53
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+PF +++ L + Y A + ++ P N+DYV Y+ G
Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIARFMRLNPTHPNIDYVIYMKG 113
Query: 139 MSYAQMIR----------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
++ + D + + S+++ Y NS Y A+ + +++
Sbjct: 114 LTDMALDDSALQGFFGIDRSDRDPTHARDAFRDFSQLLRNYPNSQYAADAQKRLVYLKDR 173
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
LA E+ + ++Y KR YVA + R + ++ +Y D + +A+ + AY L L EA +
Sbjct: 174 LAKYELSVAQFYTKREAYVAVVNRVEGMMRDYPDTQATHDALPLMENAYRNLQLNAEADK 233
Query: 249 VVSLIQER 256
V +I
Sbjct: 234 VAKIIAVN 241
>gi|229588325|ref|YP_002870444.1| putative lipoprotein [Pseudomonas fluorescens SBW25]
gi|229360191|emb|CAY47048.1| putative lipoprotein [Pseudomonas fluorescens SBW25]
Length = 341
Score = 90.2 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 57/252 (22%), Positives = 100/252 (39%), Gaps = 16/252 (6%)
Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85
+ + D V + + E+Y+ A L +++ A
Sbjct: 6 LLLIAILAMTAACSSTK------DVVDENLSEVELYQLAQKDLDNNSYTSATAKLKALES 59
Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
+PF A ++ L + Y + + A S E +I +P+ NVDY YY+ G++
Sbjct: 60 RYPFGRYADQAQLELIYANYKNAEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQD 119
Query: 146 ----------RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
D A + +++ RY NS Y A+ + RN LA+ E+
Sbjct: 120 VGLLARFLPLDMTKRDPGAARDSYNEFAQLTSRYPNSRYAPDAKQRMIYLRNLLASYEIH 179
Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
+ YYL R YVAA R + V+ N+ + + +A + EAY L L + A + ++
Sbjct: 180 VAHYYLTRQAYVAAANRGRYVVENFQETPSVGDGLAVMTEAYQRLHLDELASTSLETLKL 239
Query: 256 RYPQGYWARYVE 267
YP + +
Sbjct: 240 NYPDHPSLKDGQ 251
>gi|238785832|ref|ZP_04629801.1| hypothetical protein yberc0001_12680 [Yersinia bercovieri ATCC
43970]
gi|238798953|ref|ZP_04642416.1| hypothetical protein ymoll0001_9580 [Yersinia mollaretii ATCC
43969]
gi|238713245|gb|EEQ05288.1| hypothetical protein yberc0001_12680 [Yersinia bercovieri ATCC
43970]
gi|238717182|gb|EEQ09035.1| hypothetical protein ymoll0001_9580 [Yersinia mollaretii ATCC
43969]
Length = 240
Score = 90.2 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 53/244 (21%), Positives = 98/244 (40%), Gaps = 17/244 (6%)
Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
+ + L G V E+Y A L++ NF A
Sbjct: 2 KYLVAAATLSLVLTGCSSNKD-------VVPDNPPSELYATAQQKLQDGNFKGAITQLEA 54
Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
+PF +++ L + Y + A + + ++ P N+DYV Y+ G++
Sbjct: 55 LDNRYPFGPYSQQVQLDLIYAYYKSADLPLAQASIDRFMRLNPTHPNIDYVLYMRGLTDM 114
Query: 143 QMIR----------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
+ D + K + S++++ Y NS Y A+ + +++LA
Sbjct: 115 ALDDSALQGFFGIDRSDRDPQHAKAAFRDFSQLIQSYPNSQYATDAQKRLMFLKDRLAKH 174
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
E+ + +YY KRG YVA + R + +L +Y D + +A+ + AY L L +A +V +
Sbjct: 175 ELAVAQYYTKRGAYVAVVNRVEQMLRDYPDTKATRDALPLMENAYKQLQLNAQADKVAKI 234
Query: 253 IQER 256
I
Sbjct: 235 IAAN 238
>gi|253990667|ref|YP_003042023.1| outer membrane protein assembly complex subunit YfiO [Photorhabdus
asymbiotica subsp. asymbiotica ATCC 43949]
gi|253782117|emb|CAQ85281.1| conserved hypothetical protein [Photorhabdus asymbiotica]
Length = 243
Score = 90.2 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 53/248 (21%), Positives = 95/248 (38%), Gaps = 17/248 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + + + L G + V E+Y L++ N+ A
Sbjct: 1 MIRMKYLVAAATLSLVLSGCSGNKN-------VVPDSPPSEIYSAGQEKLRDGNYKAAIT 53
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV- 137
+PF +++ L + Y + A + + ++ P N+DYV Y+
Sbjct: 54 QLETLDNRYPFGPYSQQVQLDLIYAYYKSSDLPMALASIDRFMRLNPTHPNIDYVLYMRG 113
Query: 138 ---------GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
+ I D + + S++V Y NS Y AR + + +
Sbjct: 114 LTSQALDDSTLQSFFGIDRSDRDPEHARASFRDFSQLVRHYPNSLYAADARKRLMFIKER 173
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
LA E+ + +YY KRG YVA + R + +L +Y D + +A+ + AY L L +A +
Sbjct: 174 LAKYELSVVKYYNKRGAYVAVVNRAEQMLHDYPDTQSTLKALPYMERAYTRLGLTAQADK 233
Query: 249 VVSLIQER 256
V LI
Sbjct: 234 VTKLIAAN 241
>gi|92112629|ref|YP_572557.1| competence lipoprotein ComL, putative [Chromohalobacter salexigens
DSM 3043]
gi|91795719|gb|ABE57858.1| competence lipoprotein ComL, putative [Chromohalobacter salexigens
DSM 3043]
Length = 268
Score = 90.2 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 59/222 (26%), Positives = 103/222 (46%), Gaps = 10/222 (4%)
Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
+ ++E+Y++A L +S A +PF A ++ L + Y
Sbjct: 25 NEPAPDLQEQELYQQAQSALDAGRYSTAVTRLEALDTRYPFGRYAEQAQLELIYAYYQTE 84
Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ----------MIRDVPYDQRATKLM 158
++QA + +I +P+ VDY YY+ G++ Q +I D AT+
Sbjct: 85 DWEQARAAASRFIRLHPDHAQVDYAYYMRGLAAYQAGRFSLEGLELIDISKRDLGATRDA 144
Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
+V R+ +SPY AR + RN L+ E+++ +YL++G Y+AAI R + VL
Sbjct: 145 NVDFGELVRRFPDSPYAADARQRIVYLRNVLSRHELQVADFYLRKGAYLAAINRGEWVLQ 204
Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
+Y +A+A +VE Y+ L + D AR V+ + + P
Sbjct: 205 HYPQTPATRDALAVMVEGYLGLDMRDRARTVLQTLIKNDPDN 246
Score = 37.1 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 28/74 (37%)
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+ + L G Y A+ R + + Y +AE+A L+ AY ++AR S
Sbjct: 37 YQQAQSALDAGRYSTAVTRLEALDTRYPFGRYAEQAQLELIYAYYQTEDWEQARAAASRF 96
Query: 254 QERYPQGYWARYVE 267
+P Y
Sbjct: 97 IRLHPDHAQVDYAY 110
>gi|260912660|ref|ZP_05919146.1| DNA uptake lipoprotein [Pasteurella dagmatis ATCC 43325]
gi|260633038|gb|EEX51203.1| DNA uptake lipoprotein [Pasteurella dagmatis ATCC 43325]
Length = 291
Score = 90.2 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 52/250 (20%), Positives = 106/250 (42%), Gaps = 17/250 (6%)
Query: 17 YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76
Y + K ++ + ++ + R + E+Y +L++ ++S++
Sbjct: 30 YPMRKLKSFTLIALTALAVTACSSSNNE-------VEQRPEEELYNAGQTYLQDGDYSQS 82
Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
Y FP + + ++LL F Y Y + + ++ +YP+S ++DYV Y+
Sbjct: 83 IRYLEAVRNRFPGSSHSEQALLNLIFANYKTQDYTKTLVYADRFLQEYPQSSHLDYVLYM 142
Query: 137 VGMSYAQMIRDVPYD----------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
G++ + + + D + K +V+ + NSPY K A + +
Sbjct: 143 AGLTNSALGDNYIQDLFGVDRATRENSSIKAAFANFQTLVQHFPNSPYAKDALARMVYIK 202
Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
LA E+ I ++Y KR ++A R +L Y D + EA+ + +AY + L D A
Sbjct: 203 ASLARHELSIAKFYAKRDAHIAVANRVVGMLQQYPDTQATHEALPLMQQAYEKMNLTDLA 262
Query: 247 REVVSLIQER 256
+ +I+
Sbjct: 263 AQTAKIIEAN 272
>gi|238790741|ref|ZP_04634502.1| hypothetical protein yfred0001_15820 [Yersinia frederiksenii ATCC
33641]
gi|238721182|gb|EEQ12861.1| hypothetical protein yfred0001_15820 [Yersinia frederiksenii ATCC
33641]
Length = 240
Score = 90.2 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 52/244 (21%), Positives = 98/244 (40%), Gaps = 17/244 (6%)
Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
+ + L G V E+Y A L++ NF A
Sbjct: 2 KYLVAAATLSLVLTGCSSNKD-------VVPDNPPSELYATAQQKLQDGNFKGAITQLEA 54
Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
+PF +++ L + Y + A + + ++ P N+DYV Y+ G++
Sbjct: 55 LDNRYPFGPYSQQVQLDLIYAYYKSADLPLAQASIDRFMRLNPTHPNIDYVLYMRGLTDM 114
Query: 143 QMIR----------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
+ D + K + +++++ Y NS Y A+ + +++LA
Sbjct: 115 ALDDSALQGFFGIDRSDRDPQHAKAAFRDFNQLIQSYPNSQYATDAQKRLIFLKDRLAKH 174
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
E+ + +YY KRG YVA + R + +L +Y D + +A+ + AY L L +A +V +
Sbjct: 175 ELAVAQYYTKRGAYVAVVNRVEQMLRDYPDTQATRDALPLMENAYKQLQLNAQADKVAKI 234
Query: 253 IQER 256
I
Sbjct: 235 IAAN 238
>gi|326576922|gb|EGE26828.1| DNA uptake lipoprotein-like protein [Moraxella catarrhalis O35E]
Length = 356
Score = 90.2 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 61/249 (24%), Positives = 101/249 (40%), Gaps = 11/249 (4%)
Query: 22 FALTIFFSIAVCFLVGWERQSS--RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
L A + G + + T + Y++A L + A E
Sbjct: 5 NKLIAAMMAATLTVTGCQSVNGLFDRKADTVETAEKTDAAYYQEASEALDKNQNRNAIEA 64
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
N +P A+++LL + QY A ++ EE+I +YP S++VDY Y+ G+
Sbjct: 65 LNNIRTFYPTGQYAQQALLDLIYAQYKANDFEAVLQSTEEFIHRYPNSRSVDYALYVQGV 124
Query: 140 SYA---------QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
++ D +L + +++ Y +SPYV A + N A
Sbjct: 125 THMGGAPKASRLVRFDQSHRDVTYLRLAFRDFQNLLKHYPDSPYVADAAQRMIAIYNDFA 184
Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
E+ R+Y+KR VAA R + V Y + EA+A L + L L + A++
Sbjct: 185 EHELAAARWYVKRDAMVAAANRAKWVFQYYPQSTGVPEAIAILAYSNQKLGLTETAKQYK 244
Query: 251 SLIQERYPQ 259
L+Q YPQ
Sbjct: 245 HLLQINYPQ 253
Score = 36.7 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 13/90 (14%), Positives = 27/90 (30%)
Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
+ + A + L + + AI + Y ++A++A+ L+ A
Sbjct: 29 DRKADTVETAEKTDAAYYQEASEALDKNQNRNAIEALNNIRTFYPTGQYAQQALLDLIYA 88
Query: 237 YVALALMDEAREVVSLIQERYPQGYWARYV 266
+ + RYP Y
Sbjct: 89 QYKANDFEAVLQSTEEFIHRYPNSRSVDYA 118
>gi|146312716|ref|YP_001177790.1| outer membrane protein assembly complex subunit YfiO [Enterobacter
sp. 638]
gi|145319592|gb|ABP61739.1| conserved hypothetical protein [Enterobacter sp. 638]
Length = 245
Score = 89.9 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 47/248 (18%), Positives = 95/248 (38%), Gaps = 17/248 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + + + LVG + E+Y A L++ N+ +A
Sbjct: 1 MTRMKYLVAAATLSLALVGCSGS-------NEQVPDNPPNEIYATAQQKLQDGNWKQAIT 53
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+PF +++ L + Y A + + ++ P N+DYV Y+ G
Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQATIDRFMRLNPTHPNIDYVMYMRG 113
Query: 139 MSYAQMIR----------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
++ + D + + S++V Y NS Y A + +++
Sbjct: 114 LTNMALDDSALQGFFGVDRSDRDPQHARDAFNDFSKLVRGYPNSQYTTDATKRLVFLKDR 173
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
LA E + YY +RG +VA + R + +L +Y D + + + + AY + + +A +
Sbjct: 174 LAKYEYSVAEYYTRRGAWVAVVNRVEGMLRDYPDTQATRDGLKLMENAYRQMQMNAQAEK 233
Query: 249 VVSLIQER 256
V +I
Sbjct: 234 VAKIIAAN 241
>gi|126173260|ref|YP_001049409.1| putative lipoprotein [Shewanella baltica OS155]
gi|152999619|ref|YP_001365300.1| putative lipoprotein [Shewanella baltica OS185]
gi|160874238|ref|YP_001553554.1| putative lipoprotein [Shewanella baltica OS195]
gi|217974429|ref|YP_002359180.1| outer membrane assembly lipoprotein YfiO [Shewanella baltica OS223]
gi|304410383|ref|ZP_07392001.1| outer membrane assembly lipoprotein YfiO [Shewanella baltica OS183]
gi|307304475|ref|ZP_07584225.1| outer membrane assembly lipoprotein YfiO [Shewanella baltica BA175]
gi|125996465|gb|ABN60540.1| putative lipoprotein [Shewanella baltica OS155]
gi|151364237|gb|ABS07237.1| putative lipoprotein [Shewanella baltica OS185]
gi|160859760|gb|ABX48294.1| putative lipoprotein [Shewanella baltica OS195]
gi|217499564|gb|ACK47757.1| outer membrane assembly lipoprotein YfiO [Shewanella baltica OS223]
gi|304350867|gb|EFM15267.1| outer membrane assembly lipoprotein YfiO [Shewanella baltica OS183]
gi|306911877|gb|EFN42301.1| outer membrane assembly lipoprotein YfiO [Shewanella baltica BA175]
gi|315266472|gb|ADT93325.1| outer membrane assembly lipoprotein YfiO [Shewanella baltica OS678]
Length = 253
Score = 89.9 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 54/253 (21%), Positives = 97/253 (38%), Gaps = 14/253 (5%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+YKF+ + + L S + + +Y +A ++ N+SKA
Sbjct: 1 MYKFSKGVTLVLFSLALS----ACSSSPDDNDIAAKTSPDVLYTQARTSMELGNYSKAVR 56
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
FPF + L + Y + + +I P ++DYV+Y+ G
Sbjct: 57 SLEALDSRFPFGPHKTQVQLDLIYAYYKMDDVASGIANIDRFIRLNPTHPDIDYVFYMRG 116
Query: 139 MSYAQMIRDVPYDQRATK----------LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
+ Q + +D + R+++ Y NS Y A+ + +N+
Sbjct: 117 LVNMQADNYLFHDMLNIDRTDRDPKNAQDAFKDFDRLIKTYPNSKYAADAQKRMLALKNR 176
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
LA +++ YYLK + AA R Q V+ Y E A+ ++EAY L +
Sbjct: 177 LARYSIQVAEYYLKMNAWSAAAIRAQSVMETYPGTPSNERALEIMIEAYGELGQSKLKQN 236
Query: 249 VVSLIQERYPQGY 261
V+ ++Q YP
Sbjct: 237 VLMVMQANYPNNE 249
>gi|213646597|ref|ZP_03376650.1| outer membrane protein assembly complex subunit YfiO [Salmonella
enterica subsp. enterica serovar Typhi str. J185]
Length = 270
Score = 89.9 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 50/248 (20%), Positives = 94/248 (37%), Gaps = 17/248 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + + + FL G E+Y A L++ N+ +A
Sbjct: 1 MTRMKYLVAAATLSLFLAGCSGSKEE-------VPDNPPNEIYATAQQKLQDGNWKQAIT 53
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+PF +++ L + Y A + + ++ P N+DYV Y+ G
Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFMRLNPTHPNIDYVMYMRG 113
Query: 139 MSYAQMIR----------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
++ + D + + S++V Y NS Y A + +++
Sbjct: 114 LTNMALDDSVLQGFFGVDRSDRDPQHARAAFNDFSKLVRSYPNSQYTTDATKRLVFLKDR 173
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
LA E + YY RG +VA + R + +L NY D + +A+ + AY + L +A +
Sbjct: 174 LAKYEYSVAEYYTARGAWVAVVNRVEGMLRNYPDTQATRDALPLMENAYRQMQLNAQADK 233
Query: 249 VVSLIQER 256
V +I
Sbjct: 234 VAKIIAAN 241
>gi|296104264|ref|YP_003614410.1| putative lipoprotein [Enterobacter cloacae subsp. cloacae ATCC
13047]
gi|295058723|gb|ADF63461.1| putative lipoprotein [Enterobacter cloacae subsp. cloacae ATCC
13047]
Length = 245
Score = 89.9 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 48/248 (19%), Positives = 96/248 (38%), Gaps = 17/248 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + + + LVG + E+Y A L++ N+ +A
Sbjct: 1 MTRMKYLVAAATLSLALVGCSGS-------NEQVPDNPPNEIYATAQQKLQDGNWKQAIT 53
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+PF +++ L + Y A + + ++ P N+DYV Y+ G
Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQATIDRFMRLNPTHPNIDYVMYMRG 113
Query: 139 MSYAQMIR----------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
++ + D + + S++V Y NS YV A + +++
Sbjct: 114 LTNMALDDSALQGFFGVDRSDRDPQHARDAFNDFSKLVRGYPNSQYVTDATKRLVFLKDR 173
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
LA E + YY +RG +VA + R + +L +Y D + + + + AY + + +A +
Sbjct: 174 LAKYEYSVAEYYTRRGAWVAVVNRVEGMLRDYPDTQATRDGLKLMENAYRQMQMTAQADK 233
Query: 249 VVSLIQER 256
V +I
Sbjct: 234 VAKIIAAN 241
>gi|261342025|ref|ZP_05969883.1| competence lipoprotein ComL [Enterobacter cancerogenus ATCC 35316]
gi|288315681|gb|EFC54619.1| competence lipoprotein ComL [Enterobacter cancerogenus ATCC 35316]
Length = 245
Score = 89.9 bits (220), Expect = 4e-16, Method: Composition-based stats.
Identities = 47/248 (18%), Positives = 96/248 (38%), Gaps = 17/248 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + + + LVG + E+Y A L++ N+ +A
Sbjct: 1 MTRMKYLVAAATLSLALVGCSGS-------NEQVPDNPPNEIYATAQQKLQDGNWKQAIT 53
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+PF +++ L + Y A + + ++ P N+DYV Y+ G
Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQATIDRFMRLNPTHPNIDYVMYMRG 113
Query: 139 MSYAQMIR----------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
++ + D + + S++V Y NS Y+ A + +++
Sbjct: 114 LTNMALDDSALQGFFGVDRSDRDPQHARDAFNDFSKLVRGYPNSQYITDATKRLVFLKDR 173
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
LA E + YY +RG +VA + R + +L +Y D + + + + AY + + +A +
Sbjct: 174 LAKYEYSVAEYYTRRGAWVAVVNRVEGMLRDYPDTQATRDGLKLMENAYRQMQMTGQAEK 233
Query: 249 VVSLIQER 256
V +I
Sbjct: 234 VAKIIAAN 241
>gi|167836419|ref|ZP_02463302.1| competence lipoprotein ComL [Burkholderia thailandensis MSMB43]
Length = 274
Score = 89.9 bits (220), Expect = 4e-16, Method: Composition-based stats.
Identities = 54/226 (23%), Positives = 91/226 (40%), Gaps = 10/226 (4%)
Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106
T ++Y +A L ++ K +YF PF A+++ + A+ +
Sbjct: 33 QKSDETATWSNNKLYSEAQDALTGGDWGKCAKYFEALQGRDPFGHFAQQAQINVAYCNWK 92
Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATK 156
+ A + +I +P+ +V Y YYL GM + D +A +
Sbjct: 93 DNETASADQAVDRFIQLHPDHPDVAYAYYLKGMIHFNDDLGLFGRFSGQDMSERDPQALR 152
Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
+V+RY S Y A + N LA+ EV YY +RG YVAAI R QL
Sbjct: 153 ESYDAFKVVVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLA 212
Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
+ Y +A E+A+ + +Y L A + ++ +P +
Sbjct: 213 IKEYKNAPAIEDALHIMTLSYAKLNQPQLADDTKRVLASTFPDSPY 258
>gi|312958893|ref|ZP_07773412.1| competence lipoprotein [Pseudomonas fluorescens WH6]
gi|311286663|gb|EFQ65225.1| competence lipoprotein [Pseudomonas fluorescens WH6]
Length = 341
Score = 89.9 bits (220), Expect = 4e-16, Method: Composition-based stats.
Identities = 56/252 (22%), Positives = 100/252 (39%), Gaps = 16/252 (6%)
Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85
+ + + V + + E+Y+ A L +++ A
Sbjct: 6 LLLIAILAMTAACSSTK------EVVDENLSEVELYQLAQKDLDNNSYTSATAKLKALES 59
Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
+PF A ++ L + Y + + A S E +I +P+ NVDY YY+ G++
Sbjct: 60 RYPFGRYADQAQLELIYANYKNAEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQD 119
Query: 146 ----------RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
D A + +++ RY NS Y A+ + RN LA+ E+
Sbjct: 120 VGLLARFLPLDMTKRDPGAARDSYNEFAQLTSRYPNSRYAPDAKQRMIYLRNLLASYEIH 179
Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
+ YYL R YVAA R + V+ N+ + + +A + EAY L L + A + ++
Sbjct: 180 VAHYYLTRQAYVAAANRGRYVVENFQETPSVGDGLAVMTEAYQRLHLDELASTSLETLKL 239
Query: 256 RYPQGYWARYVE 267
YP + +
Sbjct: 240 NYPDHPSLKDGQ 251
>gi|146306003|ref|YP_001186468.1| DNA uptake lipoprotein-like protein [Pseudomonas mendocina ymp]
gi|145574204|gb|ABP83736.1| DNA uptake lipoprotein-like protein [Pseudomonas mendocina ymp]
Length = 330
Score = 89.9 bits (220), Expect = 4e-16, Method: Composition-based stats.
Identities = 63/232 (27%), Positives = 101/232 (43%), Gaps = 16/232 (6%)
Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
+ V + + E+Y +A L +++++A +PF A ++
Sbjct: 18 CSSKQ------PEVDENLSEVELYRQAQADLDNRSYTQAIAKLKALESRYPFGRYAEQAQ 71
Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR----------D 147
L + Y + + A S E +I +P+ NVDY YYL G++ R
Sbjct: 72 LELIYAYYKNVEPEAAKSSAERFIRLHPQHANVDYAYYLKGLASFDQDRGLLARFLPLDM 131
Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
D A + +++ RY S Y A+ + RN LAA EV +G YYLKR YV
Sbjct: 132 TKRDPGAARDSYNEFAQLTSRYPTSRYAPDAKQRMIYLRNLLAAYEVHVGHYYLKRQAYV 191
Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
AA R + V+ N+ + + +A + EAY LAL D A + ++ YP
Sbjct: 192 AAANRGRYVVENFQETPAVGDGLAIMTEAYQRLALNDLAATSLETLKLNYPD 243
>gi|221067307|ref|ZP_03543412.1| outer membrane assembly lipoprotein YfiO [Comamonas testosteroni
KF-1]
gi|220712330|gb|EED67698.1| outer membrane assembly lipoprotein YfiO [Comamonas testosteroni
KF-1]
Length = 271
Score = 89.9 bits (220), Expect = 4e-16, Method: Composition-based stats.
Identities = 62/250 (24%), Positives = 101/250 (40%), Gaps = 17/250 (6%)
Query: 19 LYKFALTIF-FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
+ + +LT+ + L G D T +Y +A + KA
Sbjct: 9 MPRISLTLVPAVLIAATLAGCSSTK------DDPTAKWTPERIYTEARDESSSGAYDKAV 62
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY----- 132
F + +A+++ L A+ QY AG+ QA + + + +P S +DY
Sbjct: 63 PLFEKLEGRAAGTPLAQQAQLEKAYAQYKAGEKVQALATLDRFTKLHPASPAMDYALYLK 122
Query: 133 -----VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
L + DQ+A K + +V R+ +S Y AR + N
Sbjct: 123 GLVNFNDNLGMFGWLTRQDLSERDQKAAKDSFESFRELVTRFPDSKYSDDARQRMQYIVN 182
Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
LA EV + RYY RG YVAAI R Q + +Y + EAM LV++Y AL +
Sbjct: 183 SLAQYEVHVARYYYSRGAYVAAIARAQTAIKDYQNVPSVREAMVILVKSYDALGMTQLRD 242
Query: 248 EVVSLIQERY 257
+ ++++ Y
Sbjct: 243 DAKRVLEQSY 252
>gi|291618566|ref|YP_003521308.1| YfiO [Pantoea ananatis LMG 20103]
gi|291153596|gb|ADD78180.1| YfiO [Pantoea ananatis LMG 20103]
gi|327394947|dbj|BAK12369.1| UPF0169 lipoprotein YfiO precursor [Pantoea ananatis AJ13355]
Length = 243
Score = 89.9 bits (220), Expect = 4e-16, Method: Composition-based stats.
Identities = 49/248 (19%), Positives = 96/248 (38%), Gaps = 17/248 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + + + LVG + E+Y A L++ NF A +
Sbjct: 1 MTRMKYLVAAATLSLALVGCSGSND-------AVPDNPPSEIYATAQQKLQDGNFKAAIK 53
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+PF +++ L + Y A + ++ P N+DYV Y+ G
Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPMAQAAISRFMRLNPTHPNIDYVIYMKG 113
Query: 139 MSYAQMIR----------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
++ + D + + ++++ Y NS Y A +++
Sbjct: 114 LTDMALDDSALQGFFGIDRSDRDPTHARDAFRDFAQLLRSYPNSQYAADAYKRQVYLKDR 173
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
L+ E+ + ++Y KRG YVA + R + ++ +Y D + +A+ + AY L L EA +
Sbjct: 174 LSKYELSVAQFYTKRGAYVAVVNRVEGMMRDYPDTQATHDALPLMENAYRQLQLNAEADK 233
Query: 249 VVSLIQER 256
V +I
Sbjct: 234 VAKIIAAN 241
>gi|323497825|ref|ZP_08102839.1| putative lipoprotein [Vibrio sinaloensis DSM 21326]
gi|323317172|gb|EGA70169.1| putative lipoprotein [Vibrio sinaloensis DSM 21326]
Length = 241
Score = 89.5 bits (219), Expect = 4e-16, Method: Composition-based stats.
Identities = 57/248 (22%), Positives = 103/248 (41%), Gaps = 19/248 (7%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K L+ +++V LVG + + E+Y +A + L+ N+ A
Sbjct: 1 MKKHTLSGLLALSV--LVGCSSS-------EEIVPDVPPSELYSEAQISLQSGNWLSAIS 51
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+PF + + L + Y + E + P + +D+V Y+ G
Sbjct: 52 QLEALDSRYPFGAYSEQVQLDLIYAYYKNDDLALGLATIERFTRLNPTHEKLDWVLYMRG 111
Query: 139 MSYAQMIRDVPYD----------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
+++ R+ +D K R++ERY SPY + A+ + +N+
Sbjct: 112 LTHMAQDRNFMHDLFNVDRSDRDPEPVKKAFADFKRLLERYPTSPYAEDAQKRMLALKNR 171
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
LA ++ +YL+R ++AAI R Q + Y D A E++ +EAY AL L D +
Sbjct: 172 LAEYDLATADFYLRREAWIAAINRTQELQKTYPDTVAARESLQIQLEAYKALGLEDAIKR 231
Query: 249 VVSLIQER 256
LI+
Sbjct: 232 TQQLIELN 239
>gi|295097163|emb|CBK86253.1| outer membrane assembly lipoprotein YfiO [Enterobacter cloacae
subsp. cloacae NCTC 9394]
Length = 245
Score = 89.5 bits (219), Expect = 4e-16, Method: Composition-based stats.
Identities = 47/248 (18%), Positives = 96/248 (38%), Gaps = 17/248 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + + + LVG + E+Y A L++ N+ +A
Sbjct: 1 MTRMKYLVAAATLSLALVGCSGS-------NEQVPDNPPNEIYATAQQKLQDGNWKQAIT 53
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+PF +++ L + Y A + + ++ P N+DYV Y+ G
Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQATIDRFMRLNPTHPNIDYVMYMRG 113
Query: 139 MSYAQMIR----------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
++ + D + + S++V Y NS Y+ A + +++
Sbjct: 114 LTNMALDDSALQGFFGVDRSDRDPQHARDAFNDFSKLVRSYPNSQYITDATKRLVFLKDR 173
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
LA E + YY +RG +VA + R + +L +Y D + + + + AY + + +A +
Sbjct: 174 LAKYEYSVAEYYTRRGAWVAVVNRVEGMLRDYPDTQATRDGLKLMENAYRQMQMTAQADK 233
Query: 249 VVSLIQER 256
V +I
Sbjct: 234 VAKIIAAN 241
>gi|255065279|ref|ZP_05317134.1| competence lipoprotein ComL [Neisseria sicca ATCC 29256]
gi|255050700|gb|EET46164.1| competence lipoprotein ComL [Neisseria sicca ATCC 29256]
Length = 268
Score = 89.5 bits (219), Expect = 5e-16, Method: Composition-based stats.
Identities = 49/238 (20%), Positives = 100/238 (42%), Gaps = 10/238 (4%)
Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
+T ++Y +A L N+++A + + FP A+++
Sbjct: 16 ACASNKGTVDKDAQITQDWNVEKLYAEAHDELNSSNYTRAIKLYEILESRFPNGRYAQQA 75
Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY----------VYYLVGMSYAQMIR 146
L +A+ Y + ++A + + + +P+ N+DY ++
Sbjct: 76 QLDTAYAYYKDDEPEKALAAIDRFQRHHPQHPNMDYALYLKGLVLFNEDQSFLNKLASQD 135
Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
D +A + Q + +V+RY S Y A + + L E+ + RYY+KRG Y
Sbjct: 136 WSDRDPKANRSAYQAFAELVQRYPESKYAADATERMAKLVDALGGNEISVARYYMKRGAY 195
Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
+AA+ R Q ++ Y + + EE++A + AY L A + +++ +PQ + +
Sbjct: 196 LAAVNRAQKIVERYQNTRYVEESLAMMELAYKKLDKPQLAADTRRVLETNFPQSPFLQ 253
>gi|251793937|ref|YP_003008669.1| lipoprotein [Aggregatibacter aphrophilus NJ8700]
gi|247535336|gb|ACS98582.1| lipoprotein [Aggregatibacter aphrophilus NJ8700]
Length = 264
Score = 89.5 bits (219), Expect = 5e-16, Method: Composition-based stats.
Identities = 45/248 (18%), Positives = 92/248 (37%), Gaps = 17/248 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K + + + ++ +Y +L+E ++S+A
Sbjct: 1 MRKLKSFALLTAMALAVTACSGSKQD-------VEQAPEQTLYSIGQNYLQEGDYSQAIR 53
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL-- 136
Y + FP + + + L + Y + Y + + +I ++P S ++DY Y+
Sbjct: 54 YLTAVNNRFPGSSYSEQVQLNLIYAYYKSQDYTETLVTVDRFIQRFPNSNHLDYALYMAG 113
Query: 137 --------VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
+ + + K +V+ + NSPY A + +
Sbjct: 114 LTNSALGDNFFQDFFGVDRATRENTSIKTAFANFQTLVQHFPNSPYTPDALARMAYIKAS 173
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
LA E++I ++Y KR YVA R +L Y D + +A+ + E+Y + L A +
Sbjct: 174 LARHELDIAKFYFKRDAYVATANRVVSMLKLYPDTQATLDALPLMKESYERMNLKQLADQ 233
Query: 249 VVSLIQER 256
+I
Sbjct: 234 TARIIAAN 241
>gi|307543918|ref|YP_003896397.1| lipoprotein [Halomonas elongata DSM 2581]
gi|307215942|emb|CBV41212.1| K05807 putative lipoprotein [Halomonas elongata DSM 2581]
Length = 269
Score = 89.5 bits (219), Expect = 5e-16, Method: Composition-based stats.
Identities = 57/235 (24%), Positives = 106/235 (45%), Gaps = 16/235 (6%)
Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
G + + ++Y++ L++ ++ A +PF A ++
Sbjct: 22 GCASTK------EEQAPDVAEGQLYQEGRAALEDGRYTTAVNRLEAIDTRYPFGEHAEQA 75
Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA----------QMIR 146
L + Y ++ A + +I +P+ VDY YY+ G++ ++I
Sbjct: 76 QLELIYAYYETSDWEAARAAASRFIRLHPDHPQVDYAYYMRGLAAWEAGRFSLESLRLID 135
Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
D AT+ +V RY NS Y AR + RN LA E+E+ +YL++G Y
Sbjct: 136 ISKRDLGATRDAYSDFRDLVRRYPNSQYAPDARQRIVYLRNLLAQHELEVADFYLRKGAY 195
Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
+AA+ R + V+ +Y +AE +A+A +VE Y+ L + + A+E + ++ E P
Sbjct: 196 LAAVKRGRWVIEHYPEAESTRDALAVMVEGYLGLDMPERAKESLRVLIENAPNHE 250
Score = 36.3 bits (81), Expect = 4.5, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 31/74 (41%)
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+ GR L+ G Y A+ R + + Y EHAE+A L+ AY + + AR S
Sbjct: 40 YQEGRAALEDGRYTTAVNRLEAIDTRYPFGEHAEQAQLELIYAYYETSDWEAARAAASRF 99
Query: 254 QERYPQGYWARYVE 267
+P Y
Sbjct: 100 IRLHPDHPQVDYAY 113
>gi|34497648|ref|NP_901863.1| competence lipoprotein ComL [Chromobacterium violaceum ATCC 12472]
gi|34103504|gb|AAQ59866.1| competence lipoprotein ComL [Chromobacterium violaceum ATCC 12472]
Length = 264
Score = 89.5 bits (219), Expect = 5e-16, Method: Composition-based stats.
Identities = 59/258 (22%), Positives = 111/258 (43%), Gaps = 17/258 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ ++ + + + L G T ++Y +A L N+++A +
Sbjct: 1 MKRY--VVAAMLVMVGLAGCAT-----TETYDETRGWTVEKLYSEAHDELNSGNYTRAVK 53
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+ FP+ A+++ + A+ Y G+ + A + + +I +P N+DY+YYL G
Sbjct: 54 LYETLEARFPYGRYAQQAQMDLAYTHYKDGEPELAIASADRFIKLHPTHPNLDYIYYLKG 113
Query: 139 MSY----------AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
+ Y D RA + + R+ +S Y A+ + +
Sbjct: 114 LVYYNDDSGLLAKWAGQDMSERDPRAAREAFAAFRELTTRFPSSSYAPDAKAKMIRLVDA 173
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
L E+ + RYY+KRG Y+AA R Q V+ +Y++ ++ EEA+A +V AY L L +
Sbjct: 174 LGGNEMHVARYYMKRGAYLAAANRAQGVVKDYANTKYPEEALAIMVAAYDKLQLPQLRDD 233
Query: 249 VVSLIQERYPQGYWARYV 266
++ YPQ +
Sbjct: 234 ARRVLALNYPQSQYLGKS 251
>gi|320182490|gb|EFW57384.1| outer membrane protein assembly complex subunit YfiO [Shigella
boydii ATCC 9905]
Length = 245
Score = 89.1 bits (218), Expect = 5e-16, Method: Composition-based stats.
Identities = 50/248 (20%), Positives = 96/248 (38%), Gaps = 17/248 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + + + FL G E+Y A L++ N+ +A
Sbjct: 1 MTRMKYLVAAATLSLFLAGCSGSKEE-------VPDNPPNEIYATAQQKLQDGNWRQAIT 53
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+PF +++ L + Y A + + +I P N+DYV Y+ G
Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRG 113
Query: 139 MSYAQMIR----------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
++ + D + + S++V Y NS Y A + +++
Sbjct: 114 LTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRGYPNSQYTTDAAKRLVFLKDR 173
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
LA E + YY +RG +VA + R + +L +YSD + +A+ + AY + + +A +
Sbjct: 174 LAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYSDTQATRDALPLMENAYRQMQINAQAEK 233
Query: 249 VVSLIQER 256
V +I
Sbjct: 234 VAKIIAAN 241
>gi|271501680|ref|YP_003334706.1| outer membrane assembly lipoprotein YfiO [Dickeya dadantii Ech586]
gi|270345235|gb|ACZ78000.1| outer membrane assembly lipoprotein YfiO [Dickeya dadantii Ech586]
Length = 243
Score = 89.1 bits (218), Expect = 5e-16, Method: Composition-based stats.
Identities = 53/248 (21%), Positives = 96/248 (38%), Gaps = 17/248 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + + + L G R E+Y A L++ NF A
Sbjct: 1 MTRMKYLVAAATLSLTLAGCSNSKD-------AVPDRPPSELYATAQEKLQDGNFKAAIT 53
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+PF +++ L + Y + + A + + +I P NVDYV Y+ G
Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKSAELPLAQASIDRFIRLNPTHPNVDYVLYMRG 113
Query: 139 MSYAQMIR----------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
++ D + + + +++++ Y NS Y + + +
Sbjct: 114 LTNMAQDDSALQGFFGVDRSDRDPQYARAAFKAFNQLLQGYPNSQYATDTSKRLAFLKER 173
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
LA E+ + +YY KRG YVA + R + +L +Y D + A+ + AY L L EA +
Sbjct: 174 LAKYELSVAQYYTKRGAYVAVVNRVEQMLKDYPDTQATRTALPLMENAYRELRLTAEADK 233
Query: 249 VVSLIQER 256
V +I
Sbjct: 234 VARIIAAN 241
>gi|209522217|ref|ZP_03270854.1| outer membrane assembly lipoprotein YfiO [Burkholderia sp. H160]
gi|209497346|gb|EDZ97564.1| outer membrane assembly lipoprotein YfiO [Burkholderia sp. H160]
Length = 286
Score = 89.1 bits (218), Expect = 6e-16, Method: Composition-based stats.
Identities = 53/226 (23%), Positives = 94/226 (41%), Gaps = 10/226 (4%)
Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106
T ++Y +A L ++ K +YF PF A+++ + A+ +
Sbjct: 45 EKTDETATWNNNKLYTEANDALTGGDWGKCAKYFELLEGRDPFGHFAQQAQINVAYCNWK 104
Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATK 156
+ A + +I +P+ ++ Y YYL GM + D ++ +
Sbjct: 105 DNENAAADQAIDRFIQLHPDHPDIAYAYYLKGMIHFNDDLGLFGRFSGQDMSERDPKSLR 164
Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
+V+R+ NS Y A + N LA+ EV YY +RG YVAAI R QL
Sbjct: 165 ESYDAFKVVVDRFPNSKYAPDAAQRMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLA 224
Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
L +Y +A E+A+ ++ +Y L A + ++ +P +
Sbjct: 225 LRDYKNAPAIEDALHIMILSYEKLNNQQLADDTRRVLAGTFPDSPY 270
>gi|167627647|ref|YP_001678147.1| competence lipoprotein ComL [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|241668215|ref|ZP_04755793.1| competence lipoprotein ComL [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254876750|ref|ZP_05249460.1| conserved hypothetical protein [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|167597648|gb|ABZ87646.1| competence lipoprotein ComL [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|254842771|gb|EET21185.1| conserved hypothetical protein [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 274
Score = 89.1 bits (218), Expect = 6e-16, Method: Composition-based stats.
Identities = 53/254 (20%), Positives = 107/254 (42%), Gaps = 12/254 (4%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ +F I + + L +D L V +Y KA ++ + + A
Sbjct: 1 MKRFLYLIAAAFMLMLLASCG--PKKDSELPQVYTGFTASFIYAKAHEQMQNEKYFDAIR 58
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+ +PF +A K ++ +V Y + A +LG+++I YP S YVYY++G
Sbjct: 59 SYKSLVAQYPFTPLAEKGMVDLIYVYYMDDESTMALALGQQFIKMYPYSSYKGYVYYMIG 118
Query: 139 M----------SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
+ +D + + ++ +V A+ + N
Sbjct: 119 VVGFEDGRGILQTYAPYDMNYHDPTGYQDAYVNFEKAIKLDPKGSFVPDAKRRMIYINNI 178
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
+A +I ++Y KRG Y AA+ R ++ NY + ++A+ + AY L L D+A++
Sbjct: 179 IAEHYYDIAKFYYKRGAYNAALDRASQIIRNYPQSTVTQDALVLTIRAYNKLGLYDQAKD 238
Query: 249 VVSLIQERYPQGYW 262
+ ++++ YP+ +
Sbjct: 239 NIRVLKKNYPKNKF 252
>gi|53719165|ref|YP_108151.1| putative lipoprotein [Burkholderia pseudomallei K96243]
gi|167815477|ref|ZP_02447157.1| putative lipoprotein [Burkholderia pseudomallei 91]
gi|167910660|ref|ZP_02497751.1| putative lipoprotein [Burkholderia pseudomallei 112]
gi|52209579|emb|CAH35532.1| putative lipoprotein [Burkholderia pseudomallei K96243]
Length = 274
Score = 89.1 bits (218), Expect = 6e-16, Method: Composition-based stats.
Identities = 54/226 (23%), Positives = 92/226 (40%), Gaps = 10/226 (4%)
Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106
T ++Y +A L ++ K +YF PF A+++ + A+ +
Sbjct: 33 QKSDETATWSNNKLYSEAQDALTGGDWGKCAKYFEALQGRDPFGHFAQQAQINVAYCNWK 92
Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATK 156
+ A + +I +P+ +V Y YYL GM + D +A +
Sbjct: 93 DNETAAADQAVDRFIQLHPDHPDVAYAYYLKGMIHFNDDLGLFGRFSGQDMSERDPQALR 152
Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
+V+RY S Y A + N LA+ EV YY +RG YVAAI R QL
Sbjct: 153 ESYDAFRAVVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLA 212
Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
+ Y +A E+A+ ++ +Y L A + ++ +P +
Sbjct: 213 IKEYKNAPAIEDALHIMMLSYAKLNQPQLADDTKRVLASTFPDSPY 258
>gi|319794366|ref|YP_004156006.1| outer membrane assembly lipoprotein yfio [Variovorax paradoxus EPS]
gi|315596829|gb|ADU37895.1| outer membrane assembly lipoprotein YfiO [Variovorax paradoxus EPS]
Length = 268
Score = 89.1 bits (218), Expect = 6e-16, Method: Composition-based stats.
Identities = 58/243 (23%), Positives = 97/243 (39%), Gaps = 16/243 (6%)
Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
G T +Y +A + KA + + +A++
Sbjct: 22 TGCSSTKEDK------TASWSPNRIYSEAKEESSSGAYDKAVPLYEKLEGRAAGTPLAQQ 75
Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY----------VYYLVGMSYAQMI 145
+ L A+ QY G+ A + + ++ +P S +DY L ++
Sbjct: 76 AQLEKAYAQYKGGEKASAIATIDRFMKLHPASPALDYALYLKGVINFNDDLGMFAFLTRQ 135
Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
DQ+A K + +V R+ +S Y AR + N LA EV + RYY RG
Sbjct: 136 DLSERDQKAAKESFESFRDLVTRFPDSRYAPDARQRMNYIVNSLAQYEVHVARYYYTRGA 195
Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
Y+AAI R Q+ LA+Y + EEA+ +V++Y AL + D + ++ YPQ +
Sbjct: 196 YLAAINRAQIALADYREVPALEEALYIMVKSYDALGMKDLRDDAQRVLTTNYPQSTYLAN 255
Query: 266 VET 268
Sbjct: 256 GFK 258
>gi|85058560|ref|YP_454262.1| outer membrane protein assembly complex subunit YfiO [Sodalis
glossinidius str. 'morsitans']
gi|84779080|dbj|BAE73857.1| putative lipoprotein [Sodalis glossinidius str. 'morsitans']
Length = 243
Score = 89.1 bits (218), Expect = 7e-16, Method: Composition-based stats.
Identities = 47/248 (18%), Positives = 95/248 (38%), Gaps = 17/248 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + + + L G E+Y A L++ N+ A +
Sbjct: 1 MMRMKYLVAAATLCLVLAGCSSNKD-------AVPDNPPSEIYASAQQKLQDGNYKGAIK 53
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+PF A++ L + Y + A + + ++ P NVDYV Y+ G
Sbjct: 54 ELEALDNRYPFGPYAQQVQLDLIYAYYKSADLPLAQASIDRFLRLNPTHPNVDYVLYMRG 113
Query: 139 MSYAQMIR----------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
++ + + + + ++++ Y NS Y A + +++
Sbjct: 114 LTDMALDDSALQGFFGVDRSDRNPEHARAAFRDFTQLIRGYPNSQYAMDATKRLVYLKDR 173
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
LA E+ + YY KRG YVA R + +L ++ D + +A+ + +AY L L +A +
Sbjct: 174 LAKHELSVVEYYDKRGAYVAVANRVEQMLRDFPDTQATRQALPYMEKAYRELQLSGQADK 233
Query: 249 VVSLIQER 256
+ +
Sbjct: 234 MSKIRAAN 241
>gi|88707053|ref|ZP_01104749.1| competence lipoprotein ComL family protein [Congregibacter
litoralis KT71]
gi|88698703|gb|EAQ95826.1| competence lipoprotein ComL family protein [Congregibacter
litoralis KT71]
Length = 303
Score = 89.1 bits (218), Expect = 7e-16, Method: Composition-based stats.
Identities = 55/235 (23%), Positives = 100/235 (42%), Gaps = 15/235 (6%)
Query: 35 LVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR 94
+ G D+ DS ++++Y++A +L +NF + +PF A
Sbjct: 27 IGGCAGNDEEDISADSG-----EQQIYDEAQRYLNARNFDLSIRALQALESRYPFGKYAE 81
Query: 95 KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL----------VGMSYAQM 144
++ L + Y A + A + +I +P+ NVDY YY+ +S
Sbjct: 82 QAQLELIYAHYGAFSPEAAIEAADRFIRLHPQHPNVDYAYYMKGLATATASQDFLSRFTP 141
Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204
D K S++V R+ +SPY A+ + RN LA E+ + YY +RG
Sbjct: 142 TDKTLRDTSFAKEAFAEFSQLVTRFPDSPYAADAKSRMVYLRNLLARNEIHVANYYFRRG 201
Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
Y+AA R + V+ N+ + +A + + Y+ L + D A+ + + +P
Sbjct: 202 AYLAAANRGRYVVENFQRTPAVGDGLAVMAQGYLLLGMDDLAKNAIDTLALNFPD 256
>gi|88811116|ref|ZP_01126372.1| probable transmembrane protein [Nitrococcus mobilis Nb-231]
gi|88791655|gb|EAR22766.1| probable transmembrane protein [Nitrococcus mobilis Nb-231]
Length = 251
Score = 89.1 bits (218), Expect = 7e-16, Method: Composition-based stats.
Identities = 50/233 (21%), Positives = 92/233 (39%), Gaps = 14/233 (6%)
Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
+G D + +Y+KA L ++ A + +PF + +
Sbjct: 14 IGCTGNP----AADEPEQSQQAATLYDKARELLDAGDYMAAVKRLEDLQAQYPFGPYSEQ 69
Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
+ L + Y A A + + +I P V Y YY+ G++ +
Sbjct: 70 AQLNIIYAYYKANDTVSAVAAADRFIRFNPRHAKVAYAYYMKGVAQQEQGLGFIQSLLHM 129
Query: 156 ----------KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
+ ++E Y S Y AR + R+ LA E++I +YY++RG
Sbjct: 130 DRAKRDPEPLRQAFYSFRSLLEAYPESRYADDARQRMAQLRDLLAQHELQICQYYIRRGA 189
Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
+VAAI R + V+ +Y+ EA+ L++ Y + L +V +++ YP
Sbjct: 190 WVAAINRARSVVLDYAGTPAVAEALHLLLQGYQHIELPALKEDVRRVLRLNYP 242
>gi|62181236|ref|YP_217653.1| outer membrane protein assembly complex subunit YfiO [Salmonella
enterica subsp. enterica serovar Choleraesuis str.
SC-B67]
gi|62128869|gb|AAX66572.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|322715722|gb|EFZ07293.1| outer membrane protein assembly complex subunit YfiO [Salmonella
enterica subsp. enterica serovar Choleraesuis str. A50]
Length = 245
Score = 88.7 bits (217), Expect = 7e-16, Method: Composition-based stats.
Identities = 50/248 (20%), Positives = 93/248 (37%), Gaps = 17/248 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + + FL G E+Y A L++ N+ +A
Sbjct: 1 MTHMKYLVAAATLSLFLAGCSGSKEE-------VPDNPPNEIYATAQQKLQDGNWKQAIT 53
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+PF +++ L + Y A + + ++ P N+DYV Y+ G
Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFMRLNPTHPNIDYVMYMRG 113
Query: 139 MSYAQMIR----------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
++ + D + + S++V Y NS Y A + +++
Sbjct: 114 LTNMALDDSALQGFFGVDRSDRDPQHARAAFNDFSKLVRSYPNSQYTTDATKRLVFLKDR 173
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
LA E + YY RG +VA + R + +L NY D + +A+ + AY + L +A +
Sbjct: 174 LAKYEYSVAEYYTARGAWVAVVNRVEGMLRNYPDTQATRDALPLMENAYRQMQLNAQADK 233
Query: 249 VVSLIQER 256
V +I
Sbjct: 234 VAKIIAAN 241
>gi|330817149|ref|YP_004360854.1| Putative competence lipoprotein ComL [Burkholderia gladioli BSR3]
gi|327369542|gb|AEA60898.1| Putative competence lipoprotein ComL [Burkholderia gladioli BSR3]
Length = 281
Score = 88.7 bits (217), Expect = 7e-16, Method: Composition-based stats.
Identities = 54/226 (23%), Positives = 92/226 (40%), Gaps = 10/226 (4%)
Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106
T ++Y +A L ++ K +YF PF A+++ + A+ +
Sbjct: 39 QKTDETATWSNNKLYSEAQDALNGSDWGKCAKYFEALQGRDPFGHFAQQAQINVAYCNWK 98
Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATK 156
+ A + +I +P+ ++ Y YYL GM + D +A +
Sbjct: 99 DNEASAADQAVDRFIQLHPDHPDIAYAYYLKGMIHFNDDLGLFGRFSGQDMSERDPQALR 158
Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
+V+RY S Y A + N LA+ EV YY +RG YVAAI R QL
Sbjct: 159 ESYDAFKIVVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLA 218
Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
+ Y +A E+A+ +V +Y L A + ++ +P +
Sbjct: 219 ITQYKNAPAIEDALHIMVLSYGRLNQPQLADDTKRVLASTFPDSPY 264
>gi|307729590|ref|YP_003906814.1| outer membrane assembly lipoprotein YfiO [Burkholderia sp.
CCGE1003]
gi|307584125|gb|ADN57523.1| outer membrane assembly lipoprotein YfiO [Burkholderia sp.
CCGE1003]
Length = 286
Score = 88.7 bits (217), Expect = 7e-16, Method: Composition-based stats.
Identities = 54/226 (23%), Positives = 93/226 (41%), Gaps = 10/226 (4%)
Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106
T ++Y +A L ++ K +YF PF A+++ + A+ +
Sbjct: 45 EKTDETATWNNNKLYTEANDALNGGDYGKCAKYFEMLEGRDPFGHFAQQAQINVAYCNWK 104
Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATK 156
+ A + +I +P+ ++ Y YYL GM + D ++ +
Sbjct: 105 DNETAAADQAIDRFIQLHPDHPDIAYAYYLKGMIHFNDDLGLFGRFSGQDMSERDPKSLR 164
Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
+V+RY NS Y A + N LA+ EV YY +RG YVAAI R QL
Sbjct: 165 ESYDAFKVVVDRYPNSKYAPDAAQRMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLA 224
Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
L Y +A E+A+ ++ +Y L A + ++ +P +
Sbjct: 225 LKEYKNAPAIEDALHIMMLSYEKLNQPQLADDTKRVLAGTFPDSPY 270
>gi|254189037|ref|ZP_04895548.1| putative competence lipoprotein ComL [Burkholderia pseudomallei
Pasteur 52237]
gi|157936716|gb|EDO92386.1| putative competence lipoprotein ComL [Burkholderia pseudomallei
Pasteur 52237]
Length = 274
Score = 88.7 bits (217), Expect = 8e-16, Method: Composition-based stats.
Identities = 54/226 (23%), Positives = 92/226 (40%), Gaps = 10/226 (4%)
Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106
T ++Y +A L ++ K +YF PF A+++ + A+ +
Sbjct: 33 QKSDETATWSNNKLYSEAQDALTGGDWGKCAKYFEALQGRDPFGHFAQQAQINVAYCNWK 92
Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATK 156
+ A + +I +P+ +V Y YYL GM + D +A +
Sbjct: 93 DNETAAADQAVDRFIQLHPDHPDVAYAYYLKGMIHFNDDLGLFGRFSGQDMSERDPQALR 152
Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
+V+RY S Y A + N LA+ EV YY +RG YVAAI R QL
Sbjct: 153 ESYDAFKAVVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLA 212
Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
+ Y +A E+A+ ++ +Y L A + ++ +P +
Sbjct: 213 IKEYKNAPAIEDALHIMMLSYAKLNQPQLADDTKRVLASTFPDSPY 258
>gi|298368342|ref|ZP_06979660.1| competence lipoprotein ComL [Neisseria sp. oral taxon 014 str.
F0314]
gi|298282345|gb|EFI23832.1| competence lipoprotein ComL [Neisseria sp. oral taxon 014 str.
F0314]
Length = 267
Score = 88.7 bits (217), Expect = 8e-16, Method: Composition-based stats.
Identities = 55/239 (23%), Positives = 103/239 (43%), Gaps = 11/239 (4%)
Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
+ + D +T ++Y +A L N+++A + + FP A++S
Sbjct: 16 ACASKGTVDKDA-QITQDWNVEKLYAEAQDELNSNNYTRAIKLYELLESRFPNGRYAQQS 74
Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY----------VYYLVGMSYAQMIR 146
L +A+ Y + ++A + E + +P+ N+DY ++
Sbjct: 75 QLDTAYAYYKDDEPEKALAAIERFQRHHPQHPNMDYALYLKGLVLFNEDQSFLNKLASQD 134
Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
D +A + Q S++V+ Y NS Y A +T + L E+ I RYY+KRG Y
Sbjct: 135 WSDRDPKANRDAYQAFSQLVQLYPNSKYAPDATERMTKLVDALGGNEIAIARYYMKRGAY 194
Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
+AAI R Q ++ Y + + EE++A + AY L A + ++ +P + +
Sbjct: 195 LAAINRAQKIVEQYQNTRYVEESLAMMELAYKKLGKPQLAADSRRILAGNFPASPYLQK 253
>gi|297172748|gb|ADI23714.1| DNA uptake lipoprotein [uncultured Oceanospirillales bacterium
HF4000_21D01]
Length = 327
Score = 88.7 bits (217), Expect = 8e-16, Method: Composition-based stats.
Identities = 62/246 (25%), Positives = 109/246 (44%), Gaps = 11/246 (4%)
Query: 35 LVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR 94
+ + D + + + + Y +A+ L Q+F+ A + FPF A
Sbjct: 18 ISACGWFGDDED-ADEFSGLSTEEQFYRRALDQLNGQSFNAAISTYQALESRFPFGRFAA 76
Query: 95 KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR-------- 146
++ + + Y + A + + +I +PE++NVDY YY+ G+S R
Sbjct: 77 QAQIEIVYAYYRNNDVEAARAAADRFIRLHPENENVDYAYYMKGLSSFSDNRGLLNRFLP 136
Query: 147 --DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204
D ++ S+++ Y +SPY AR + RN LAA E+ + YYL+R
Sbjct: 137 IDPTKRDPGRSRESFSDFSQLLALYPDSPYAADARARMIFLRNNLAAYEIHVANYYLERS 196
Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
Y+AA+ R Q V+ N+ +A ++E Y+ L L D A ++L++E YPQ
Sbjct: 197 AYIAALRRGQYVVENFQGTPAVAYGVAIMIEGYLRLGLDDLADTSLALLRENYPQHEALD 256
Query: 265 YVETLV 270
+
Sbjct: 257 DSGNFI 262
>gi|59711170|ref|YP_203946.1| lipoprotein component of outer membrane protein assembly complex
[Vibrio fischeri ES114]
gi|197334835|ref|YP_002155321.1| competence lipoprotein ComL [Vibrio fischeri MJ11]
gi|59479271|gb|AAW85058.1| lipoprotein component of outer membrane protein assembly complex
[Vibrio fischeri ES114]
gi|197316325|gb|ACH65772.1| competence lipoprotein ComL [Vibrio fischeri MJ11]
Length = 241
Score = 88.7 bits (217), Expect = 8e-16, Method: Composition-based stats.
Identities = 58/246 (23%), Positives = 100/246 (40%), Gaps = 17/246 (6%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
LTI +AV LVG + E+Y +A + L+ N++ A E
Sbjct: 1 MKRLTISSLLAVSLLVGCSSSDDVIPDI-------PPSELYAQAQVSLQAGNWTSAIERL 53
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
+PF + + L +V Y + E + P D+V Y+ G++
Sbjct: 54 EALDSRYPFGAYSEQVQLDLIYVYYKNDDLALGLATIERFTRLNPTHPKADWVLYMRGLT 113
Query: 141 YAQMIRDVPYD----------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
+ R +D + + R++ERY NS Y + A+ + +N+LA
Sbjct: 114 HMAQDRSFMHDLFRVDRSDRDPEPARSAFKDFKRLLERYPNSLYAEDAQTRMYALKNRLA 173
Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
E+ +YL+R +++AI R Q + Y D E A +++ ++ AY L L D +
Sbjct: 174 DYELATADFYLRREAWISAINRCQELQRTYPDTEAARKSLTIMLSAYKELKLEDAIKRTE 233
Query: 251 SLIQER 256
LI
Sbjct: 234 ELIALN 239
>gi|90022197|ref|YP_528024.1| Acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine
O-acyltransferase [Saccharophagus degradans 2-40]
gi|89951797|gb|ABD81812.1| competence lipoprotein ComL, putative [Saccharophagus degradans
2-40]
Length = 301
Score = 88.7 bits (217), Expect = 8e-16, Method: Composition-based stats.
Identities = 54/250 (21%), Positives = 104/250 (41%), Gaps = 16/250 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ KF L + L + + ++++Y++A L ++ A E
Sbjct: 1 MRKFGLLGGLITIILVLSACASEKDKIAAG-------SEKDIYQRAQYALNHSSWDAAVE 53
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
Y +PF A +S L F Y + +++ A + + +I +P+ ++VDY YY+ G
Sbjct: 54 YLQLLEEHYPFGVYAEQSQLELIFAYYQSDEHEAAIASADRFIRLHPQHRSVDYAYYMRG 113
Query: 139 MSYAQMIRDVPYDQRAT---------KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
++ + + Y ++ + RY +SPY A+ + RN +
Sbjct: 114 VASFSNDTAITSFLPTDVTQRDIGTAREAFNYFNQFLNRYPDSPYALDAQKRMIYLRNTM 173
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
A E+ + YY KR Y+AA R + V+ N + +A + Y L + + A +
Sbjct: 174 ARSEIHVANYYFKREAYLAAANRGRYVVENMQGTPAVPDGLAVMAMGYHMLNMPELANDA 233
Query: 250 VSLIQERYPQ 259
V ++ YP
Sbjct: 234 VKVLIANYPN 243
>gi|323491102|ref|ZP_08096292.1| putative lipoprotein [Vibrio brasiliensis LMG 20546]
gi|323314649|gb|EGA67723.1| putative lipoprotein [Vibrio brasiliensis LMG 20546]
Length = 241
Score = 88.7 bits (217), Expect = 8e-16, Method: Composition-based stats.
Identities = 54/248 (21%), Positives = 105/248 (42%), Gaps = 19/248 (7%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K L+ +++V LVG + V E+Y +A + L+ N+ A +
Sbjct: 1 MKKHTLSGLLALSV--LVGCSSS-------EEVVPDVPPSELYSEAQVSLQSGNWLTAID 51
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+PF + + L + Y + E + P + +D+V Y+ G
Sbjct: 52 KLEALDSRYPFGAYSEQVQLDLIYAYYKNDDLALGLATIERFTRLNPTHEKLDWVLYMRG 111
Query: 139 MSYAQMIRDVPYD----------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
+++ R+ +D K +++ERY +SPY + ++ + +N+
Sbjct: 112 LTHMAQDRNFMHDLLNTDRSDRDPEPVKKAFADFKKLLERYPDSPYAEDSQKRMYALKNR 171
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
LA ++ +YL+R ++AAI R Q + Y D E A +++ +EAY L L D +
Sbjct: 172 LAKYDLATADFYLRREAWIAAINRTQELQKTYPDTEAARQSLEIQLEAYKQLGLEDAVQR 231
Query: 249 VVSLIQER 256
+I+
Sbjct: 232 TQKMIELN 239
>gi|301154794|emb|CBW14257.1| predicted lipoprotein [Haemophilus parainfluenzae T3T1]
Length = 263
Score = 88.3 bits (216), Expect = 9e-16, Method: Composition-based stats.
Identities = 50/248 (20%), Positives = 94/248 (37%), Gaps = 17/248 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K + ++ + + + E+Y K L+E ++S +
Sbjct: 1 MRKIKSLVLIALTSFAIAACSSGNKE-------VEQASVDELYAKGAAALQEGSYSDSIR 53
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL-- 136
Y + FP + +++L + Y Y + ++ Q+P+S N DY Y+
Sbjct: 54 YLKAATERFPGSTYQEQAMLDLIYANYKTQDYTATLVTVDNFLQQFPQSPNRDYAVYMAG 113
Query: 137 --------VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
+ I + + K +V + NSPY + A + ++
Sbjct: 114 LTNLATADNMIQDFFGIDRATRETTSMKTAFSNFQSLVRAFPNSPYSQDAVARMAYIKDS 173
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
LA E+EI ++Y KR +VA R +L Y DA+ E + + EAY + L A +
Sbjct: 174 LARHELEIAKFYAKRDAWVAVSNRVVGMLQQYPDAKATYEGLFLMKEAYEKMGLQQLANQ 233
Query: 249 VVSLIQER 256
+I
Sbjct: 234 TQQVIDAN 241
>gi|126438751|ref|YP_001059204.1| putative competence lipoprotein ComL [Burkholderia pseudomallei
668]
gi|126218244|gb|ABN81750.1| putative competence lipoprotein ComL [Burkholderia pseudomallei
668]
Length = 274
Score = 88.3 bits (216), Expect = 9e-16, Method: Composition-based stats.
Identities = 54/226 (23%), Positives = 92/226 (40%), Gaps = 10/226 (4%)
Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106
T ++Y +A L ++ K +YF PF A+++ + A+ +
Sbjct: 33 QKSDETATWSNNKLYSEAQDALTGGDWGKCAKYFEALQGRDPFGHFAQQAQINVAYCNWK 92
Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATK 156
+ A + +I +P+ +V Y YYL GM + D +A +
Sbjct: 93 DNETAAADQAVDRFIQLHPDHPDVAYAYYLKGMIHFNDDLGLFGRFSGQDMSERDPQALR 152
Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
+V+RY S Y A + N LA+ EV YY +RG YVAAI R QL
Sbjct: 153 ESYDAFKAVVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLA 212
Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
+ Y +A E+A+ ++ +Y L A + ++ +P +
Sbjct: 213 IKEYKNAPAIEDALHIMMLSYAKLNQPQLADDTKRVLASTFPDSPY 258
>gi|167581725|ref|ZP_02374599.1| competence lipoprotein ComL [Burkholderia thailandensis TXDOH]
gi|167619841|ref|ZP_02388472.1| competence lipoprotein ComL [Burkholderia thailandensis Bt4]
gi|257138983|ref|ZP_05587245.1| competence lipoprotein ComL [Burkholderia thailandensis E264]
Length = 274
Score = 88.3 bits (216), Expect = 9e-16, Method: Composition-based stats.
Identities = 54/226 (23%), Positives = 92/226 (40%), Gaps = 10/226 (4%)
Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106
T ++Y +A L ++ K +YF PF A+++ + A+ +
Sbjct: 33 QKSDETATWSNNKLYSEAQDALTGGDWGKCAKYFEALQGRDPFGHFAQQAQINVAYCNWK 92
Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATK 156
+ A + +I +P+ +V Y YYL GM + D +A +
Sbjct: 93 DNETAAADQAVDRFIQLHPDHPDVAYAYYLKGMIHFNDDLGLFGRFSGQDMSERDPQALR 152
Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
+V+RY S Y A + N LA+ EV YY +RG YVAAI R QL
Sbjct: 153 ESYDAFKVVVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLA 212
Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
+ Y +A E+A+ ++ +Y L A + ++ +P +
Sbjct: 213 IKEYKNAPAIEDALHIMMLSYAKLNQPQLADDTKRVLASTFPDSPY 258
>gi|295676472|ref|YP_003604996.1| outer membrane assembly lipoprotein YfiO [Burkholderia sp.
CCGE1002]
gi|295436315|gb|ADG15485.1| outer membrane assembly lipoprotein YfiO [Burkholderia sp.
CCGE1002]
Length = 286
Score = 88.3 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 53/226 (23%), Positives = 93/226 (41%), Gaps = 10/226 (4%)
Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106
T ++Y +A L ++ K +YF PF A+++ + A+ +
Sbjct: 45 EKTDETATWNNNKLYTEANDALTGGDWGKCAKYFELLEGRDPFGHFAQQAQINVAYCNWK 104
Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATK 156
+ A + +I +P+ ++ Y YYL GM + D ++ +
Sbjct: 105 DNENAAADQAIDRFIQLHPDHPDIAYAYYLKGMIHFNDDLGLFGRFSGQDMSERDPKSLR 164
Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
+V+R+ NS Y A + N LA+ EV YY +RG YVAAI R QL
Sbjct: 165 ESYDAFKVVVDRFPNSKYAPDAAQRMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLA 224
Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
L Y +A E+A+ ++ +Y L A + ++ +P +
Sbjct: 225 LREYKNAPAIEDALHIMILSYEKLNNQQLADDTRRVLAGTFPDSPY 270
>gi|222111092|ref|YP_002553356.1| outer membrane assembly lipoprotein yfio [Acidovorax ebreus TPSY]
gi|221730536|gb|ACM33356.1| outer membrane assembly lipoprotein YfiO [Acidovorax ebreus TPSY]
Length = 265
Score = 88.3 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 62/233 (26%), Positives = 95/233 (40%), Gaps = 16/233 (6%)
Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
T ++Y +A L ++ KA + +A+++
Sbjct: 21 CSSTPEDK------TAGWSTDKIYSEARDELNGGSYDKAVPLLEKLEGRAAGTPLAQQAQ 74
Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY----------VYYLVGMSYAQMIRD 147
L A+ QY G+ QA + + ++ +P S DY L S+
Sbjct: 75 LEKAYAQYKGGEKAQAIATLDRFMKLHPASPAYDYALYLKGLVNFNDNLGLFSWLSRQDL 134
Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
DQ+A K + +V R+ S Y AR +T N LA EV + RYY +RG YV
Sbjct: 135 SERDQKAAKDSFESFRELVTRFPESRYTPDARQRMTYIVNSLAQYEVHVARYYYERGAYV 194
Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
AA+ R Q +A+Y D EEA+ LV +Y AL L + ++ YPQ
Sbjct: 195 AAVSRAQSAVADYKDVPATEEALYILVRSYDALGLTQLRDDTRRVMDASYPQS 247
>gi|330501970|ref|YP_004378839.1| DNA uptake lipoprotein-like protein [Pseudomonas mendocina NK-01]
gi|328916256|gb|AEB57087.1| DNA uptake lipoprotein-like protein [Pseudomonas mendocina NK-01]
Length = 330
Score = 88.3 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 60/232 (25%), Positives = 101/232 (43%), Gaps = 16/232 (6%)
Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
+ V + + E+Y++A L +++++A +PF A ++
Sbjct: 18 CSSKQ------PEVDENLSEVELYQQAQADLDNRSYTQAIAKLKALESRYPFGRYAEQAQ 71
Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR----------D 147
L + Y + + A S E +I +P+ NVDY YYL G++ R
Sbjct: 72 LELIYAYYKNAEPEAAKSSAERFIRLHPQHANVDYAYYLKGLASFDQDRGLLARFLPLDM 131
Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
D A + +++ RY S Y A+ + RN LAA E+ +G YYL R YV
Sbjct: 132 TKRDPGAARDSYNEFAQLTSRYPTSRYAPDAKQRMIYLRNLLAAYEIHVGHYYLTRQAYV 191
Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
AA R + V+ N+ + + +A + EAY L+L D A + ++ YP
Sbjct: 192 AAANRGRYVVENFQETPSVGDGLAIMTEAYQRLSLDDLAATSLETLKLNYPD 243
Score = 35.9 bits (80), Expect = 6.8, Method: Composition-based stats.
Identities = 17/76 (22%), Positives = 29/76 (38%)
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+ + L Y AI + + + + Y +AE+A L+ AY A + A+
Sbjct: 35 YQQAQADLDNRSYTQAIAKLKALESRYPFGRYAEQAQLELIYAYYKNAEPEAAKSSAERF 94
Query: 254 QERYPQGYWARYVETL 269
+PQ Y L
Sbjct: 95 IRLHPQHANVDYAYYL 110
>gi|121599824|ref|YP_993133.1| competence lipoprotein ComL [Burkholderia mallei SAVP1]
gi|124384405|ref|YP_001026091.1| competence lipoprotein ComL [Burkholderia mallei NCTC 10229]
gi|126449169|ref|YP_001080639.1| competence lipoprotein ComL [Burkholderia mallei NCTC 10247]
gi|167002221|ref|ZP_02268011.1| competence lipoprotein ComL [Burkholderia mallei PRL-20]
gi|238562639|ref|ZP_00440110.2| competence lipoprotein ComL [Burkholderia mallei GB8 horse 4]
gi|254178609|ref|ZP_04885264.1| competence lipoprotein ComL [Burkholderia mallei ATCC 10399]
gi|254199930|ref|ZP_04906296.1| competence lipoprotein ComL [Burkholderia mallei FMH]
gi|254206263|ref|ZP_04912615.1| competence lipoprotein ComL [Burkholderia mallei JHU]
gi|254358322|ref|ZP_04974595.1| competence lipoprotein ComL [Burkholderia mallei 2002721280]
gi|121228634|gb|ABM51152.1| competence lipoprotein ComL [Burkholderia mallei SAVP1]
gi|124292425|gb|ABN01694.1| competence lipoprotein ComL [Burkholderia mallei NCTC 10229]
gi|126242039|gb|ABO05132.1| competence lipoprotein ComL [Burkholderia mallei NCTC 10247]
gi|147749526|gb|EDK56600.1| competence lipoprotein ComL [Burkholderia mallei FMH]
gi|147753706|gb|EDK60771.1| competence lipoprotein ComL [Burkholderia mallei JHU]
gi|148027449|gb|EDK85470.1| competence lipoprotein ComL [Burkholderia mallei 2002721280]
gi|160699648|gb|EDP89618.1| competence lipoprotein ComL [Burkholderia mallei ATCC 10399]
gi|238522243|gb|EEP85689.1| competence lipoprotein ComL [Burkholderia mallei GB8 horse 4]
gi|243062039|gb|EES44225.1| competence lipoprotein ComL [Burkholderia mallei PRL-20]
Length = 274
Score = 88.3 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 54/226 (23%), Positives = 92/226 (40%), Gaps = 10/226 (4%)
Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106
T ++Y +A L ++ K +YF PF A+++ + A+ +
Sbjct: 33 QKSDETATWSNNKLYSEAQDALTGGDWGKCAKYFEALQGRDPFGHFAQQAQINVAYCNWK 92
Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATK 156
+ A + +I +P+ +V Y YYL GM + D +A +
Sbjct: 93 DNETATADQAVDRFIQLHPDHPDVAYAYYLKGMIHFNDDLGLFGRFSGQDMSERDPQALR 152
Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
+V+RY S Y A + N LA+ EV YY +RG YVAAI R QL
Sbjct: 153 ESYDAFKAVVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLA 212
Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
+ Y +A E+A+ ++ +Y L A + ++ +P +
Sbjct: 213 IKEYKNAPAIEDALHIMMLSYAKLNQPQLADDTKRVLASTFPDSPY 258
>gi|307132188|ref|YP_003884204.1| putative lipoprotein [Dickeya dadantii 3937]
gi|306529717|gb|ADM99647.1| predicted lipoprotein [Dickeya dadantii 3937]
Length = 244
Score = 88.3 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 53/248 (21%), Positives = 96/248 (38%), Gaps = 17/248 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + + + L G R E+Y A L++ NF A
Sbjct: 1 MTRMKYLVAAATLSLTLAGCSNSKD-------AVPDRPPSELYATAQEKLQDGNFKAAIT 53
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+PF +++ L + Y + + A + + +I P NVDYV Y+ G
Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKSAELPLAQASIDRFIRLNPTHPNVDYVLYMRG 113
Query: 139 MSYAQMIR----------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
++ D + + + S++++ Y NS Y + + +
Sbjct: 114 LTNMAQDDSTLQGFFGVDRSDRDPQYARSAFKAFSQLLQGYPNSQYATDTSKRLAFLKER 173
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
LA E+ + +YY KRG YVA + R + +L +Y D + A+ + AY L L +A +
Sbjct: 174 LAKYELSVAQYYTKRGAYVAVVNRVEQMLKDYPDTQATRTALPLMENAYRELQLTAQADK 233
Query: 249 VVSLIQER 256
V +I
Sbjct: 234 VAKIIAAN 241
>gi|126454430|ref|YP_001066470.1| putative competence lipoprotein ComL [Burkholderia pseudomallei
1106a]
gi|167719291|ref|ZP_02402527.1| competence lipoprotein ComL [Burkholderia pseudomallei DM98]
gi|167738291|ref|ZP_02411065.1| competence lipoprotein ComL [Burkholderia pseudomallei 14]
gi|167823888|ref|ZP_02455359.1| competence lipoprotein ComL [Burkholderia pseudomallei 9]
gi|167845427|ref|ZP_02470935.1| competence lipoprotein ComL [Burkholderia pseudomallei B7210]
gi|167893969|ref|ZP_02481371.1| competence lipoprotein ComL [Burkholderia pseudomallei 7894]
gi|167902419|ref|ZP_02489624.1| competence lipoprotein ComL [Burkholderia pseudomallei NCTC 13177]
gi|167918688|ref|ZP_02505779.1| competence lipoprotein ComL [Burkholderia pseudomallei BCC215]
gi|217421678|ref|ZP_03453182.1| putative competence lipoprotein ComL [Burkholderia pseudomallei
576]
gi|242317204|ref|ZP_04816220.1| putative competence lipoprotein ComL [Burkholderia pseudomallei
1106b]
gi|254297449|ref|ZP_04964902.1| putative competence lipoprotein ComL [Burkholderia pseudomallei
406e]
gi|126228072|gb|ABN91612.1| putative competence lipoprotein ComL [Burkholderia pseudomallei
1106a]
gi|157807603|gb|EDO84773.1| putative competence lipoprotein ComL [Burkholderia pseudomallei
406e]
gi|217395420|gb|EEC35438.1| putative competence lipoprotein ComL [Burkholderia pseudomallei
576]
gi|242140443|gb|EES26845.1| putative competence lipoprotein ComL [Burkholderia pseudomallei
1106b]
Length = 274
Score = 88.3 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 54/226 (23%), Positives = 92/226 (40%), Gaps = 10/226 (4%)
Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106
T ++Y +A L ++ K +YF PF A+++ + A+ +
Sbjct: 33 QKSDETATWSNNKLYSEAQDALTGGDWGKCAKYFEALQGRDPFGHFAQQAQINVAYCNWK 92
Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATK 156
+ A + +I +P+ +V Y YYL GM + D +A +
Sbjct: 93 DNETAAADQAVDRFIQLHPDHPDVAYAYYLKGMIHFNDDLGLFGRFSGQDMSERDPQALR 152
Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
+V+RY S Y A + N LA+ EV YY +RG YVAAI R QL
Sbjct: 153 ESYDAFKVVVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLA 212
Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
+ Y +A E+A+ ++ +Y L A + ++ +P +
Sbjct: 213 IKEYKNAPAIEDALHIMMLSYAKLNQPQLADDTKRVLASTFPDSPY 258
>gi|320539056|ref|ZP_08038730.1| putative outer membrane protein assembly lipoprotein [Serratia
symbiotica str. Tucson]
gi|320030896|gb|EFW12901.1| putative outer membrane protein assembly lipoprotein [Serratia
symbiotica str. Tucson]
Length = 241
Score = 88.3 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 54/246 (21%), Positives = 90/246 (36%), Gaps = 15/246 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + + + L G E+Y A +++ NF A
Sbjct: 1 MTRMKYLVAVATLSLVLAGCSTSKD-------AVPDNPPSEIYATAQQKMQDGNFKGAIT 53
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+PF +++ L + Y + A + + +I P N+DYV Y+ G
Sbjct: 54 QLEALDNRYPFGPYSQQVQLYLIYAYYKSADLPLAQASIDRFIRLNPTHPNIDYVMYMRG 113
Query: 139 MSYAQMIRDVPYDQRATKL-------MLQYMSRI-VERYTNSPYVKGARFYVTVGRNQLA 190
++ + ER NS YV A + +++LA
Sbjct: 114 LADMALDDSTLQGFFGIDRSDRDPLHARAAFRDFSQERSPNSQYVTDANKRLVYLKDRLA 173
Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
E+ + YY KRG YVAAI R + +L Y D + +A+ + AY L L EA +V
Sbjct: 174 KYELSVVEYYTKRGAYVAAINRVEQMLREYPDTKATRDALPLMERAYKRLQLNSEAEKVA 233
Query: 251 SLIQER 256
+I
Sbjct: 234 KVIAAN 239
>gi|53723512|ref|YP_102985.1| competence lipoprotein ComL [Burkholderia mallei ATCC 23344]
gi|52426935|gb|AAU47528.1| competence lipoprotein ComL [Burkholderia mallei ATCC 23344]
Length = 280
Score = 87.9 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 54/226 (23%), Positives = 92/226 (40%), Gaps = 10/226 (4%)
Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106
T ++Y +A L ++ K +YF PF A+++ + A+ +
Sbjct: 39 QKSDETATWSNNKLYSEAQDALTGGDWGKCAKYFEALQGRDPFGHFAQQAQINVAYCNWK 98
Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATK 156
+ A + +I +P+ +V Y YYL GM + D +A +
Sbjct: 99 DNETATADQAVDRFIQLHPDHPDVAYAYYLKGMIHFNDDLGLFGRFSGQDMSERDPQALR 158
Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
+V+RY S Y A + N LA+ EV YY +RG YVAAI R QL
Sbjct: 159 ESYDAFKAVVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLA 218
Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
+ Y +A E+A+ ++ +Y L A + ++ +P +
Sbjct: 219 IKEYKNAPAIEDALHIMMLSYAKLNQPQLADDTKRVLASTFPDSPY 264
>gi|84393595|ref|ZP_00992348.1| DNA uptake lipoprotein [Vibrio splendidus 12B01]
gi|84375804|gb|EAP92698.1| DNA uptake lipoprotein [Vibrio splendidus 12B01]
Length = 242
Score = 87.9 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 52/246 (21%), Positives = 97/246 (39%), Gaps = 17/246 (6%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
LT+ +AV LVG + + +Y A L+ ++ A E
Sbjct: 1 MKHLTLSGLLAVSLLVGCSST-------EEIVPDVPPSVLYSDAQESLQSGSWLSAIEKL 53
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
+PF + + L + Y + ++ P + D+V Y+ G++
Sbjct: 54 EALDSRYPFGAYSEQVQLDLIYAYYKNDDLALGLATISRFLRLNPTHEKQDWVLYMRGLT 113
Query: 141 YAQMIRDVPYDQRATKL----------MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
+ R+ +D R++ER+ +SPY + A+ + +N+LA
Sbjct: 114 HMAQDRNFMHDIFNIDRSDRDPEPVKLAFADFKRLLERFPSSPYAEDAQKRMFALKNRLA 173
Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
++ +YL+R ++AA+ R Q + Y D A +++ +EAY L L D A
Sbjct: 174 EYDLATADFYLRREAWIAAVNRTQELQKTYPDTIAARKSLDIQLEAYKQLGLEDAASRTE 233
Query: 251 SLIQER 256
LI+
Sbjct: 234 KLIELN 239
>gi|319763345|ref|YP_004127282.1| outer membrane assembly lipoprotein yfio [Alicycliphilus
denitrificans BC]
gi|330825579|ref|YP_004388882.1| outer membrane assembly lipoprotein YfiO [Alicycliphilus
denitrificans K601]
gi|317117906|gb|ADV00395.1| outer membrane assembly lipoprotein YfiO [Alicycliphilus
denitrificans BC]
gi|329310951|gb|AEB85366.1| outer membrane assembly lipoprotein YfiO [Alicycliphilus
denitrificans K601]
Length = 265
Score = 87.9 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 63/225 (28%), Positives = 97/225 (43%), Gaps = 10/225 (4%)
Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
+ T ++Y +A L + KA + +A+++ L A+ QY
Sbjct: 23 SSPEDKTAGWSTDKIYAEARDELNGGAYDKAVPLLEKLEGRAAGTPLAQQAQLEKAYAQY 82
Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVG----------MSYAQMIRDVPYDQRAT 155
G+ QA + + ++ +P S +DY YL G S+ DQ+A
Sbjct: 83 KGGEKAQAIATLDRFMKLHPASPALDYALYLKGLVNFNENLGLFSWLSRQDLSERDQKAA 142
Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
K + +V R+ S Y AR +T N LA EV + RYY +RG YVAAI R Q
Sbjct: 143 KDSFESFRELVTRFPESRYTPDARLRMTYIVNSLAQYEVHVARYYYQRGAYVAAISRAQS 202
Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
+ +Y D EEA+ LV +Y AL + + ++Q YP
Sbjct: 203 AITDYKDVPATEEALYILVRSYDALGMTQLRDDAQRVLQASYPNS 247
>gi|251788632|ref|YP_003003353.1| outer membrane protein assembly complex subunit YfiO [Dickeya zeae
Ech1591]
gi|247537253|gb|ACT05874.1| outer membrane assembly lipoprotein YfiO [Dickeya zeae Ech1591]
Length = 243
Score = 87.9 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 53/248 (21%), Positives = 96/248 (38%), Gaps = 17/248 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + + + L G R E+Y A L++ NF A
Sbjct: 1 MTRMKYLVAAATLSLTLAGCSNSKD-------AVPDRPPSELYATAQEKLQDGNFKAAIT 53
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+PF +++ L + Y + + A + + +I P NVDYV Y+ G
Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKSAELPLAQASIDRFIRLNPTHPNVDYVLYMRG 113
Query: 139 MSYAQMIR----------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
++ D + + + S++++ Y NS Y + + +
Sbjct: 114 LTNMAQDDSALQGFFGVDRSDRDPQYARAAFKAFSQLLQGYPNSQYATDTSKRLAFLKER 173
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
LA E+ + +YY KRG YVA + R + +L +Y D + A+ + AY L L +A +
Sbjct: 174 LAKYELSVAQYYTKRGAYVAVVNRVEQMLKDYPDTQATRTALPLMENAYRELQLTAQADK 233
Query: 249 VVSLIQER 256
V +I
Sbjct: 234 VAKIIATN 241
>gi|134277813|ref|ZP_01764528.1| putative competence lipoprotein ComL [Burkholderia pseudomallei
305]
gi|226197143|ref|ZP_03792720.1| putative competence lipoprotein ComL [Burkholderia pseudomallei
Pakistan 9]
gi|237812528|ref|YP_002896979.1| competence lipoprotein ComL [Burkholderia pseudomallei MSHR346]
gi|254197470|ref|ZP_04903892.1| putative competence lipoprotein ComL [Burkholderia pseudomallei
S13]
gi|254259639|ref|ZP_04950693.1| putative competence lipoprotein ComL [Burkholderia pseudomallei
1710a]
gi|134251463|gb|EBA51542.1| putative competence lipoprotein ComL [Burkholderia pseudomallei
305]
gi|169654211|gb|EDS86904.1| putative competence lipoprotein ComL [Burkholderia pseudomallei
S13]
gi|225930522|gb|EEH26532.1| putative competence lipoprotein ComL [Burkholderia pseudomallei
Pakistan 9]
gi|237504631|gb|ACQ96949.1| competence lipoprotein ComL [Burkholderia pseudomallei MSHR346]
gi|254218328|gb|EET07712.1| putative competence lipoprotein ComL [Burkholderia pseudomallei
1710a]
Length = 280
Score = 87.9 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 54/226 (23%), Positives = 92/226 (40%), Gaps = 10/226 (4%)
Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106
T ++Y +A L ++ K +YF PF A+++ + A+ +
Sbjct: 39 QKSDETATWSNNKLYSEAQDALTGGDWGKCAKYFEALQGRDPFGHFAQQAQINVAYCNWK 98
Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATK 156
+ A + +I +P+ +V Y YYL GM + D +A +
Sbjct: 99 DNETAAADQAVDRFIQLHPDHPDVAYAYYLKGMIHFNDDLGLFGRFSGQDMSERDPQALR 158
Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
+V+RY S Y A + N LA+ EV YY +RG YVAAI R QL
Sbjct: 159 ESYDAFKVVVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLA 218
Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
+ Y +A E+A+ ++ +Y L A + ++ +P +
Sbjct: 219 IKEYKNAPAIEDALHIMMLSYAKLNQPQLADDTKRVLASTFPDSPY 264
>gi|256257866|ref|ZP_05463402.1| COML, competence lipoprotein [Brucella abortus bv. 9 str. C68]
gi|260884156|ref|ZP_05895770.1| competence protein ComL [Brucella abortus bv. 9 str. C68]
gi|260873684|gb|EEX80753.1| competence protein ComL [Brucella abortus bv. 9 str. C68]
Length = 125
Score = 87.9 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 45/98 (45%), Positives = 64/98 (65%)
Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
Y A+ + V R+QLA KE++IGRYYL+R EY+AAI RF+ V+ YS+ EEA+ARL
Sbjct: 2 YTDDAKTKIRVARDQLAGKEMQIGRYYLERKEYLAAIKRFRGVVEEYSNTRQVEEALARL 61
Query: 234 VEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
VEAY AL L EA+ S++ + +P W + L++
Sbjct: 62 VEAYYALGLTSEAQMAASVLGKNFPDSQWYKDSYKLLQ 99
>gi|254179572|ref|ZP_04886171.1| putative competence lipoprotein ComL [Burkholderia pseudomallei
1655]
gi|184210112|gb|EDU07155.1| putative competence lipoprotein ComL [Burkholderia pseudomallei
1655]
Length = 274
Score = 87.9 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 54/226 (23%), Positives = 92/226 (40%), Gaps = 10/226 (4%)
Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106
T ++Y +A L ++ K +YF PF A+++ + A+ +
Sbjct: 33 QKSDETATWSNNKLYSEAQDALTGGDWGKCAKYFEALQGRDPFGHFAQQAQINVAYCNWK 92
Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATK 156
+ A + +I +P+ +V Y YYL GM + D +A +
Sbjct: 93 DNETAAADQAVDRFIQLHPDHPDVAYAYYLKGMIHFNDDLGLFGRFSGQDMSERDPQALR 152
Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
+V+RY S Y A + N LA+ EV YY +RG YVAAI R QL
Sbjct: 153 ESYDAFKAVVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLA 212
Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
+ Y +A E+A+ ++ +Y L A + ++ +P +
Sbjct: 213 IKEYKNAPAIEDALHIMMLSYAKLNQPQLADDTKRVLASTFPDSPY 258
>gi|325981784|ref|YP_004294186.1| outer membrane assembly lipoprotein YfiO [Nitrosomonas sp. AL212]
gi|325531303|gb|ADZ26024.1| outer membrane assembly lipoprotein YfiO [Nitrosomonas sp. AL212]
Length = 268
Score = 87.9 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 55/251 (21%), Positives = 103/251 (41%), Gaps = 15/251 (5%)
Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
S+A+ ++G D D + Y +A L + ++ A + + +P
Sbjct: 4 SLALFLVLGLSACGLLPDRTDDQED-WSANKFYSEAKEKLNDGSYPAAIKLYETLESRYP 62
Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
+ +A+++ L A+ Y + A + + +I +P NVDY YY+ G++ +
Sbjct: 63 YGRIAQQAQLEVAYAHYKNDEPASAIAAADRFIKLHPNHANVDYAYYIKGLANFNEGWGM 122
Query: 149 --------------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
D +A+ + +V R+ S Y +R + N LA E+
Sbjct: 123 LGFLLKGPFKQDMSERDPKASYESFEIFKELVTRFPESKYAADSRQRMAYLLNLLAMGEI 182
Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
RYY+KR Y+AA R Q + Y EEA+ ++ AY AL + D + +++
Sbjct: 183 HTARYYMKRKAYIAAANRAQNAVKEYPPTPATEEALYIMIRAYEALEMYDLRDDAERVMR 242
Query: 255 ERYPQGYWARY 265
+P +
Sbjct: 243 INFPNSIFLAE 253
>gi|57239503|ref|YP_180639.1| hypothetical protein Erum7760 [Ehrlichia ruminantium str.
Welgevonden]
gi|58579484|ref|YP_197696.1| hypothetical protein ERWE_CDS_08200 [Ehrlichia ruminantium str.
Welgevonden]
gi|57161582|emb|CAH58510.1| putative exported lipoprotein [Ehrlichia ruminantium str.
Welgevonden]
gi|58418110|emb|CAI27314.1| Conserved hypothetical protein [Ehrlichia ruminantium str.
Welgevonden]
Length = 250
Score = 87.9 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 73/249 (29%), Positives = 121/249 (48%), Gaps = 2/249 (0%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
K I I+ F+V S + + R +YE A+ + + A +
Sbjct: 4 LKVFKNILVLISCLFIVSCAFLSKE--RVVKSVENRTADGIYESALKKSSNKQYKDAVKD 61
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
+ +PF+ VA K+ +M +F+ Y Y +AA+ E+YI YP+S+++D YYL M
Sbjct: 62 LEEIDSLYPFSPVAIKARIMMSFLNYELENYSRAATYAEDYINLYPDSEDIDVAYYLRIM 121
Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
+ I D+ DQ + + + V + NS Y++ + + +AAKE IG++
Sbjct: 122 ANYMQINDIDRDQSVAYKVSELLDEFVRLFPNSQYLEEVNLRLNMVHEHIAAKEFSIGKF 181
Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
YL+RGEYVAAI RF +L Y + + E++ R EAY++L D ++ +SL+QE
Sbjct: 182 YLQRGEYVAAIRRFSTILKRYKNTRYFPESVYRTAEAYLSLGDKDAYKKYISLLQECCVG 241
Query: 260 GYWARYVET 268
W
Sbjct: 242 SEWYVLSHN 250
>gi|261867119|ref|YP_003255041.1| lipoprotein [Aggregatibacter actinomycetemcomitans D11S-1]
gi|261412451|gb|ACX81822.1| lipoprotein [Aggregatibacter actinomycetemcomitans D11S-1]
Length = 262
Score = 87.9 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 50/248 (20%), Positives = 93/248 (37%), Gaps = 17/248 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K + + + ++ +Y +L++ ++S+A
Sbjct: 1 MRKLKSFALLTAMALAVTACSSSKQD-------VEQAPEQTLYTTGQTYLQDGDYSQAIR 53
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL-- 136
YFN S FP + + L + Y + Y + + +I +YP S ++DY Y+
Sbjct: 54 YFNAVSNRFPGSSYGEQVQLNLIYAYYKSQDYSETLLTIDRFIQRYPNSSHLDYALYMAG 113
Query: 137 --------VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
+ + + K +V + NSPY A +T +
Sbjct: 114 LTNSALGDNFFQDFFGVDRATRENTSIKTAFANFQNLVNHFPNSPYTPDALARMTYIKAS 173
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
LA E+EI ++Y KR YVA R +L Y D + +A+ + E+Y + L A +
Sbjct: 174 LARHELEIAKFYFKRDAYVATANRVVSMLKLYPDTQATLDALPLMKESYEKMNLKHLADQ 233
Query: 249 VVSLIQER 256
+I
Sbjct: 234 TAKVIAAN 241
Score = 35.5 bits (79), Expect = 7.7, Method: Composition-based stats.
Identities = 18/89 (20%), Positives = 28/89 (31%)
Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
G+ YL+ G+Y AI F V + + + E+ L+ AY
Sbjct: 20 CSSSKQDVEQAPEQTLYTTGQTYLQDGDYSQAIRYFNAVSNRFPGSSYGEQVQLNLIYAY 79
Query: 238 VALALMDEAREVVSLIQERYPQGYWARYV 266
E + +RYP Y
Sbjct: 80 YKSQDYSETLLTIDRFIQRYPNSSHLDYA 108
>gi|73667425|ref|YP_303441.1| hypothetical protein Ecaj_0812 [Ehrlichia canis str. Jake]
gi|72394566|gb|AAZ68843.1| protein of unknown function UPF0169 [Ehrlichia canis str. Jake]
Length = 254
Score = 87.9 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 74/241 (30%), Positives = 126/241 (52%), Gaps = 4/241 (1%)
Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
TI F++G +++ R E+YE A+ +++ A + +
Sbjct: 10 TICLLCCCIFMLGCSLVKKDIKFVEE----RTADEMYESALKKSGIKDYKSAVKDLEEID 65
Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
+PF+ VA K+ LM +F+ Y G Y +A ++YI YP+SK++D+ YYL M+
Sbjct: 66 NLYPFSPVAIKARLMMSFLNYELGDYSRAEIYADDYIQLYPDSKDIDFAYYLRIMANYMQ 125
Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204
I D+ DQ + +L+ + V + NS Y++ + + +AAKE IG++YL+RG
Sbjct: 126 ISDIDRDQSSVNKVLELLDEFVRLFPNSIYLEEVMKRLDLVHQHIAAKEFSIGKFYLQRG 185
Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
EYVAAI RF +L Y D ++ E++ R+ EAY+AL + + +SL++E W +
Sbjct: 186 EYVAAIKRFSTILNKYEDTKYYSESLYRIAEAYLALGDVTAYAKYMSLLKECCINTGWYK 245
Query: 265 Y 265
Sbjct: 246 E 246
>gi|293390712|ref|ZP_06635046.1| lipoprotein [Aggregatibacter actinomycetemcomitans D7S-1]
gi|290951246|gb|EFE01365.1| lipoprotein [Aggregatibacter actinomycetemcomitans D7S-1]
Length = 262
Score = 87.9 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 50/248 (20%), Positives = 93/248 (37%), Gaps = 17/248 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K + + + ++ +Y +L++ ++S+A
Sbjct: 1 MRKLKSFALLTAMALAVTACSSSKQD-------VEQAPEQTLYTTGQTYLQDGDYSQAIR 53
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL-- 136
YFN S FP + + L + Y + Y + + +I +YP S ++DY Y+
Sbjct: 54 YFNAVSNRFPGSSYGEQVQLNLIYAYYKSQDYNETLLTIDRFIQRYPNSSHLDYALYMAG 113
Query: 137 --------VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
+ + + K +V + NSPY A +T +
Sbjct: 114 LTNSALGDNFFQDFFGVDRATRENTSIKTAFANFQNLVNHFPNSPYTPDALARMTYIKAS 173
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
LA E+EI ++Y KR YVA R +L Y D + +A+ + E+Y + L A +
Sbjct: 174 LARHELEIAKFYFKRDAYVATANRVVSMLKLYPDTQATLDALPLMKESYEKMNLKHLADQ 233
Query: 249 VVSLIQER 256
+I
Sbjct: 234 TAQVIAAN 241
Score = 36.3 bits (81), Expect = 4.8, Method: Composition-based stats.
Identities = 18/89 (20%), Positives = 29/89 (32%)
Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
G+ YL+ G+Y AI F V + + + E+ L+ AY
Sbjct: 20 CSSSKQDVEQAPEQTLYTTGQTYLQDGDYSQAIRYFNAVSNRFPGSSYGEQVQLNLIYAY 79
Query: 238 VALALMDEAREVVSLIQERYPQGYWARYV 266
+E + +RYP Y
Sbjct: 80 YKSQDYNETLLTIDRFIQRYPNSSHLDYA 108
>gi|149926151|ref|ZP_01914413.1| probable transmembrane protein [Limnobacter sp. MED105]
gi|149824969|gb|EDM84181.1| probable transmembrane protein [Limnobacter sp. MED105]
Length = 282
Score = 87.5 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 57/249 (22%), Positives = 103/249 (41%), Gaps = 15/249 (6%)
Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
+ L D T+ +YE+A + N+ + E +
Sbjct: 19 LFLIPALIFALAACGSAKQFDE-----TEGWSPARLYEEAKAEIDVGNYERGIELLEKLE 73
Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
+P+ A+++ + +AF Y AG QA + + +I YP +N+DYVYYL G+
Sbjct: 74 ARYPYGRFAQQAQIDTAFAYYKAGDNAQALAATDRFIKLYPNHQNLDYVYYLRGLISFNE 133
Query: 145 IRDVP----------YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
+ + D + T+ +V R+ +S Y + ++ + N LA E+
Sbjct: 134 DKGIFSLLSGEDQSARDPKGTRAAFDAFKEVVSRFPDSKYYEDSKSRLQYLVNALAQNEL 193
Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
+ RYY KRG Y+AA+ R Q V+ + EEA+ + +Y L + A + +I
Sbjct: 194 HVARYYYKRGAYLAAVNRAQEVVRRFEQTPSIEEALFISLRSYEKLNMTALAADTKRVIN 253
Query: 255 ERYPQGYWA 263
+ +
Sbjct: 254 LNFKDSPYW 262
>gi|291614497|ref|YP_003524654.1| outer membrane assembly lipoprotein YfiO [Sideroxydans
lithotrophicus ES-1]
gi|291584609|gb|ADE12267.1| outer membrane assembly lipoprotein YfiO [Sideroxydans
lithotrophicus ES-1]
Length = 264
Score = 87.5 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 52/239 (21%), Positives = 95/239 (39%), Gaps = 17/239 (7%)
Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
+ LV S++ E+Y KA ++++N+ KA + F +P
Sbjct: 7 VFLLLTLVACSSDPSKE------GQNLTADELYAKAQASMQDENYEKAVKQFETLQSRYP 60
Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY-----------VYYLV 137
+ A+++ + A+ Y + A + + + YP S ++DY
Sbjct: 61 YGRYAQQAQMEIAYAYYKHSEPAPAIAALDHFAKMYPMSTHLDYVLYLKGLINFNENINS 120
Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
D A + +V R+ +S Y A+ + N LA+ E+ I
Sbjct: 121 LFGTMFKQDPSERDPSALRESFNSFKELVTRFPDSKYAPDAKLRMQYLLNSLASSEIHIA 180
Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
YYL+RG YVAA R + VL ++ + EA+ LV+AY A+ + + ++
Sbjct: 181 SYYLRRGAYVAAANRAKSVLIDFPNTPQTREALQILVQAYDAMGMEVLRDDTQRVLSLN 239
>gi|170718792|ref|YP_001783974.1| hypothetical protein HSM_0636 [Haemophilus somnus 2336]
gi|168826921|gb|ACA32292.1| Tetratricopeptide TPR_2 repeat protein [Haemophilus somnus 2336]
Length = 262
Score = 87.5 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 59/252 (23%), Positives = 105/252 (41%), Gaps = 17/252 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
++K + A L + + +YEK +L++ ++S+A
Sbjct: 1 MHKLKSLALVAFASLALGACSSSGK-------AIEEGTAQTLYEKGHSYLQDADYSQAIR 53
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
Y + + FP + + L + Y + Y A + +I QYP+S ++DYV Y+ G
Sbjct: 54 YLDTAKKRFPGSQYNEQVQLDLIYAYYKSQDYTNALVTIDRFIQQYPQSSHLDYVIYIAG 113
Query: 139 MSYAQMIRDVPYD----------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
+S + + + D + K +V+ + NSPY A + R
Sbjct: 114 LSNSALGDNWFQDLFGVDRATRESTSIKTAFANFQTLVQHFPNSPYASDALARMAYIRAS 173
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
LA E+EI ++Y KR +VA R +L Y D + +A+ + AY + L A++
Sbjct: 174 LARHELEIAKFYAKRNAHVAVANRVVGMLQQYPDTKATLDALPLMKNAYEKMGLTKLAQQ 233
Query: 249 VVSLIQERYPQG 260
SLIQ +
Sbjct: 234 ADSLIQANQNKS 245
>gi|53804664|ref|YP_113450.1| competence lipoprotein ComL [Methylococcus capsulatus str. Bath]
gi|53758425|gb|AAU92716.1| competence lipoprotein ComL [Methylococcus capsulatus str. Bath]
Length = 286
Score = 87.5 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 50/247 (20%), Positives = 95/247 (38%), Gaps = 10/247 (4%)
Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
A W D + + Y +A + + ++ KA + + + +P
Sbjct: 21 LTACSSFPFWSAGKEEDTDIKDEHADWGPAQFYAEAKHAMMDGSYDKAIKLYEKLEARYP 80
Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV----------G 138
F A ++ + AF Y + + A + + +I P +VDY YYL
Sbjct: 81 FGDYATQAQIDVAFCYYKNNEPESAIAAVDRFIKLNPTEPHVDYAYYLRGLINYNRGIGF 140
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
+ D + + ++ ++ NS Y + AR RN LA ++ +
Sbjct: 141 IDRWLPTDSSQRDPGSARDAYNDFETLLNKFPNSVYREDARQRAIALRNNLAMYDIHVAD 200
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
YY++R YVAAI R V+ Y + A+ + +AY L + A ++ + Y
Sbjct: 201 YYMRRRAYVAAIRRSAEVVQKYQRTQAIPHALRIMEDAYRQLDMPQMADDIARVYALNYA 260
Query: 259 QGYWARY 265
+G ++
Sbjct: 261 EGRLSKD 267
>gi|239815170|ref|YP_002944080.1| outer membrane assembly lipoprotein YfiO [Variovorax paradoxus
S110]
gi|239801747|gb|ACS18814.1| outer membrane assembly lipoprotein YfiO [Variovorax paradoxus
S110]
Length = 268
Score = 87.2 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 57/242 (23%), Positives = 96/242 (39%), Gaps = 16/242 (6%)
Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
G S T +Y +A + + KA + + +A+++
Sbjct: 23 GCSSTSVDK------TANWSPNRIYAEAKDEVGSGAYDKAVPLYEKLEGRAAGTPLAQQA 76
Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY----------VYYLVGMSYAQMIR 146
L A+ QY +G+ A + + ++ +P S +DY L ++
Sbjct: 77 QLEKAYAQYKSGEKANAIATIDRFLKLHPASPAIDYALYLKGVINFNDDLGMFAFLTRQD 136
Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
DQ+A K + + R+ S Y AR + N LA EV + RYY RG Y
Sbjct: 137 LSERDQKAAKESFESFKELATRFPESRYAPDARQRMNYIVNSLAQYEVHVARYYYSRGAY 196
Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
+AAI R QL L++Y + EEA+ +V +Y AL + D + ++ YP +
Sbjct: 197 LAAINRAQLALSDYREVPALEEALYIIVRSYDALGMKDLRDDAQRVLTTNYPHSEYLARG 256
Query: 267 ET 268
Sbjct: 257 FK 258
>gi|254449016|ref|ZP_05062470.1| competence protein ComL [gamma proteobacterium HTCC5015]
gi|198261410|gb|EDY85701.1| competence protein ComL [gamma proteobacterium HTCC5015]
Length = 261
Score = 87.2 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 43/252 (17%), Positives = 86/252 (34%), Gaps = 17/252 (6%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
+ L I F++ L G D + +Y++A + F A
Sbjct: 17 IRRILFIGFAVTALMLSGCASDIDD-------LDRWDEVRLYQEAKGAMARGEFQTAIRR 69
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV-- 137
+ +PF A + L + + + + + S + + P VDY Y+
Sbjct: 70 LETLNARYPFDDYAIQGQLDLMYAYFKSMRMEDVISTAQRFARLNPTHPKVDYALYMQGL 129
Query: 138 --------GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
+ Y+ + + +V R+ +S Y + RNQL
Sbjct: 130 ADFDLNKSFLQRWFPRDPSEYELPVLERSFNAFAELVRRFPDSEYAPDGERRMIYLRNQL 189
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
A + +Y++R +++A R Q + Y+ A E+A+ + +Y L + A
Sbjct: 190 AEACMSRATWYVRREAWLSAAQRAQQCIQRYNGAPAVEKALGIMANSYEKLDMPQLASAT 249
Query: 250 VSLIQERYPQGY 261
+ + P
Sbjct: 250 RNRTSQTAPTSK 261
>gi|113460512|ref|YP_718576.1| DNA uptake lipoprotein [Haemophilus somnus 129PT]
gi|112822555|gb|ABI24644.1| DNA uptake lipoprotein [Haemophilus somnus 129PT]
Length = 262
Score = 87.2 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 59/252 (23%), Positives = 105/252 (41%), Gaps = 17/252 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
++K + A L + + +YEK +L++ ++S+A
Sbjct: 1 MHKLKSLALVAFASLALGACSSSGK-------AIEEGTAQTLYEKGHSYLQDADYSQAIR 53
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
Y + + FP + + L + Y + Y A + +I QYP+S ++DYV Y+ G
Sbjct: 54 YLDTAKKRFPGSQYNEQVQLDLIYAYYKSQDYTNALVTIDRFIQQYPQSSHLDYVIYIAG 113
Query: 139 MSYAQMIRDVPYD----------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
+S + + + D + K +V+ + NSPY A + R
Sbjct: 114 LSNSALGDNWFQDLFGVDRATRESTSIKTAFANFQTLVQHFPNSPYAADALARMAYIRAS 173
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
LA E+EI ++Y KR +VA R +L Y D + +A+ + AY + L A++
Sbjct: 174 LARHELEIAKFYAKRNAHVAVANRVVGMLQQYPDTKATLDALPLMKNAYEKMGLTKLAQQ 233
Query: 249 VVSLIQERYPQG 260
SLIQ +
Sbjct: 234 ADSLIQANQNKS 245
>gi|90408472|ref|ZP_01216631.1| hypothetical protein PCNPT3_03216 [Psychromonas sp. CNPT3]
gi|90310404|gb|EAS38530.1| hypothetical protein PCNPT3_03216 [Psychromonas sp. CNPT3]
Length = 241
Score = 87.2 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 49/244 (20%), Positives = 104/244 (42%), Gaps = 14/244 (5%)
Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90
V F+ + ++ + +Y+ A L+ N+ KA E +PF
Sbjct: 2 IVLFISSCSSSKTEKPKVE----DKPPSVLYQDAKAQLQAANYEKASEILEALDSRYPFG 57
Query: 91 GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV----------GMS 140
+ + L + Y + A + + ++ P ++DY+YY+
Sbjct: 58 PHSDQVQLDLIYSYYKRDESALALANIDRFMRLNPTHPDLDYLYYMRGLTQIAADQEFFQ 117
Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
I D + S++V+ Y S Y A+ ++ +++LA E+ I ++Y
Sbjct: 118 SLFNIERFDRDPSHALQAFKDFSQLVKFYPKSQYAADAQLHLIDIKSRLARYELSIAKWY 177
Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
KR Y+A+I R +++L NY D++ E+A+ +++ Y L L+ +++++ YP+
Sbjct: 178 FKREAYIASINRTKIILNNYPDSDSIEDALVLMIKGYERLNLVTPKTNALAILKMNYPKN 237
Query: 261 YWAR 264
+
Sbjct: 238 RLLK 241
>gi|312796111|ref|YP_004029033.1| lipoprotein, ComL family [Burkholderia rhizoxinica HKI 454]
gi|312167886|emb|CBW74889.1| Lipoprotein, ComL family [Burkholderia rhizoxinica HKI 454]
Length = 276
Score = 87.2 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 56/236 (23%), Positives = 96/236 (40%), Gaps = 14/236 (5%)
Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
G + T +++Y +A ++ K +YF PF A+++
Sbjct: 26 GCHGLPEK----TDETAAWTNQKLYSEAQDAFTAGDWGKCSKYFELLQGRDPFGHFAQQA 81
Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG----------MSYAQMIR 146
+ A+ Q+ + A + +I +P+ ++ Y YYL G
Sbjct: 82 QINVAYCQWKDNETAAAEQAVDRFIQLHPDHPDIAYAYYLKGLISFNDDLGLFGRFAGQD 141
Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
D +A + +VE+Y +S Y A + N LA+ EV YY +RG Y
Sbjct: 142 MSERDPKALRDSYDAFRVVVEKYPSSKYAPDAAQRMRYIVNALASHEVHTADYYYRRGAY 201
Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
VAAI R QLVL Y +A E+A+ ++ +Y AL A + ++ +P +
Sbjct: 202 VAAINRAQLVLKEYKNAPATEDALHVMILSYRALNQPQLADDTQRVLTSTFPDSPY 257
>gi|264678274|ref|YP_003278181.1| transmembrane protein [Comamonas testosteroni CNB-2]
gi|262208787|gb|ACY32885.1| putative transmembrane protein [Comamonas testosteroni CNB-2]
Length = 271
Score = 87.2 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 61/250 (24%), Positives = 100/250 (40%), Gaps = 17/250 (6%)
Query: 19 LYKFALTIF-FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
+ + +LT+ + L G D T +Y +A + KA
Sbjct: 9 MPRISLTLVPAVLIAATLAGCSSTK------DDPTAKWTPERIYTEARDESSSGAYDKAV 62
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY----- 132
F + +A+++ L A+ QY AG+ QA + + + +P S +DY
Sbjct: 63 PLFEKLEGRAAGTPLAQQAQLEKAYAQYKAGEKVQALATLDRFTKLHPASPAMDYALYLK 122
Query: 133 -----VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
L + DQ+A K + +V R+ +S Y AR + N
Sbjct: 123 GLVNFNDNLGMFGWLTRQDLSERDQKAAKDSFESFRELVTRFPDSKYSDDARQRMQYIVN 182
Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
LA EV + +YY RG YVAAI R Q + +Y + EAM LV++Y AL +
Sbjct: 183 SLAQYEVHVAKYYYSRGAYVAAIARAQAAIKDYQNVPAVREAMVILVKSYDALGMTQLRD 242
Query: 248 EVVSLIQERY 257
+ +++ Y
Sbjct: 243 DAQRVLESSY 252
>gi|326796214|ref|YP_004314034.1| outer membrane assembly lipoprotein YfiO [Marinomonas mediterranea
MMB-1]
gi|326546978|gb|ADZ92198.1| outer membrane assembly lipoprotein YfiO [Marinomonas mediterranea
MMB-1]
Length = 280
Score = 87.2 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 53/247 (21%), Positives = 106/247 (42%), Gaps = 17/247 (6%)
Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85
+ L Q+ R+ ++E Y+KA L + A ++ +
Sbjct: 11 LVIVTFYSILSACSNQTVRE-------PDLPEQEYYDKAQEALDNGLPATAVKHLKDLTA 63
Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
+PF + ++ L + QY +G Y + + E +I + +S +DY YY+ G+S +
Sbjct: 64 RYPFGDFSTRAELDLIYAQYESGDYIASHATAERFIRNHLDSDALDYAYYMRGLSTYKGA 123
Query: 146 RDV----------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
D + + + R+ SPY A+ + RN +A E++
Sbjct: 124 ETFLGRYLDLNPAERDAHEFEKAFGEFADFLARFPKSPYAVDAKARMIYLRNTVADHELQ 183
Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
+ YY KR ++A+ R Q V+ +Y + EEA+A ++AY+ + + A+ + ++ +
Sbjct: 184 VAHYYFKRHAPISALRRAQEVIQHYPSSNSVEEAIAVTIQAYLNMEQYELAKTNLGVLTK 243
Query: 256 RYPQGYW 262
YP +
Sbjct: 244 NYPNSKY 250
>gi|238027089|ref|YP_002911320.1| putative competence lipoprotein ComL [Burkholderia glumae BGR1]
gi|237876283|gb|ACR28616.1| Putative competence lipoprotein ComL [Burkholderia glumae BGR1]
Length = 281
Score = 87.2 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 53/226 (23%), Positives = 93/226 (41%), Gaps = 10/226 (4%)
Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106
T ++Y +A L +++ K +YF PF A+++ + A+ +
Sbjct: 39 QKTDETATWSNNKLYSEAQDALTGRDWGKCAKYFEALQGRDPFGHFAQQAQINVAYCNWK 98
Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATK 156
+ A + +I +P+ ++ Y YYL GM + D +A +
Sbjct: 99 DNELTAADQAVDRFIQLHPDHPDIAYAYYLKGMIHFNDDLGLFGRFSGQDMSERDPQALR 158
Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
+V+RY S Y A + N LA+ EV YY +RG YVAAI R QL
Sbjct: 159 ESYDAFKIVVDRYPKSKYAPDAAARMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLA 218
Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
+ Y +A E+A+ ++ +Y L A + ++ +P +
Sbjct: 219 ITQYKNAPAIEDALHIMMLSYTRLNQPQLADDTKRVLAATFPDSPY 264
>gi|56417074|ref|YP_154148.1| hypothetical protein AM1010 [Anaplasma marginale str. St. Maries]
gi|56388306|gb|AAV86893.1| hypothetical protein AM1010 [Anaplasma marginale str. St. Maries]
Length = 308
Score = 87.2 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 68/241 (28%), Positives = 112/241 (46%), Gaps = 3/241 (1%)
Query: 30 IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89
+ LV + + ++YE + E + KA F++ +PF
Sbjct: 25 LLCAVLVILSILCTTHPVAAASFAEEGVHKLYEDGLRLFHEGRYKKAIAVFDKIEALYPF 84
Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
+ +A L++A Y G Y ++ASL E YI YP SK++DY YY+ ++ I D+
Sbjct: 85 SQMAIDGSLVAAVAHYELGNYAESASLAEGYIDSYPSSKSIDYAYYVRILAKYMQIPDLG 144
Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
DQ + V + NS ++ + + LAA+E IG++YLKRG ++AA
Sbjct: 145 LDQGVALEVRNLAYEFVRMFPNSRHLGEISKRLAAVQQHLAAREFMIGKFYLKRGGHIAA 204
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
+ RF+ +++ Y + + E + RLVEAY AL A +S + E W E L
Sbjct: 205 VKRFRALISAYPSSAYTNEGLYRLVEAYTALGDHKSAAAYLSKLDE---GNVWRARAERL 261
Query: 270 V 270
+
Sbjct: 262 L 262
>gi|288940533|ref|YP_003442773.1| outer membrane assembly lipoprotein YfiO [Allochromatium vinosum
DSM 180]
gi|288895905|gb|ADC61741.1| outer membrane assembly lipoprotein YfiO [Allochromatium vinosum
DSM 180]
Length = 275
Score = 87.2 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 60/239 (25%), Positives = 102/239 (42%), Gaps = 14/239 (5%)
Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
G T+ ++Y +A L ++ A E + + +PF A ++
Sbjct: 19 GCGIFGKEI----DETEGWSASKLYSEAATELDAGSYEHAIELYQKLEARYPFGRYAMQA 74
Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
L A+ Y A + + A + + +I YP++ VDY YYL G+ T
Sbjct: 75 QLDVAYAHYRAEEPEDALAAADRFIKLYPQNPYVDYAYYLKGIVNYNRSIGFLDRFIPTD 134
Query: 157 ----------LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
+ + +VER+ NS Y + AR + R+ LA EV + RYY+KRG Y
Sbjct: 135 ASQRDPGSALDAFKDFAILVERFPNSKYAEDARQRMVYLRSNLAMNEVHVARYYMKRGAY 194
Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
+AA R V+ +Y ++A+ L++AY AL D A + ++ +G +
Sbjct: 195 LAAANRANHVIQHYQRTSAVDDALEVLIDAYRALGKDDLAADAKRVLDLNRQEGRFIAD 253
Score = 36.3 bits (81), Expect = 5.0, Method: Composition-based stats.
Identities = 19/92 (20%), Positives = 31/92 (33%)
Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
+ A+K L G Y AI +Q + A Y +A +A + A+
Sbjct: 23 FGKEIDETEGWSASKLYSEAATELDAGSYEHAIELYQKLEARYPFGRYAMQAQLDVAYAH 82
Query: 238 VALALMDEAREVVSLIQERYPQGYWARYVETL 269
++A + YPQ + Y L
Sbjct: 83 YRAEEPEDALAAADRFIKLYPQNPYVDYAYYL 114
>gi|127513879|ref|YP_001095076.1| putative lipoprotein [Shewanella loihica PV-4]
gi|126639174|gb|ABO24817.1| putative lipoprotein [Shewanella loihica PV-4]
Length = 252
Score = 87.2 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 49/230 (21%), Positives = 86/230 (37%), Gaps = 10/230 (4%)
Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
D +Y +A ++ N+SKA +PF + L +
Sbjct: 23 KPEDDIELSKSSPEVLYSQARTSMELGNYSKAVRSLEALDSRYPFGPHKTQVQLDLIYAY 82
Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK-------- 156
Y + + +I P K++DYVYY+ G+ Q + +D
Sbjct: 83 YKLDDSASGIANIDRFIRLNPTHKDIDYVYYMRGLVNMQSDNYMFHDMLNIDRTDRDPKA 142
Query: 157 --LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
+ R++++Y NS Y A+ + +N+LA + + YY+K + AA R Q
Sbjct: 143 AQDAFKDFDRLIKQYPNSKYAADAQKRMQFLKNRLAKYAITVAEYYIKMNAWSAAAVRAQ 202
Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
VL Y E A+ + AY L V+ ++Q +P +
Sbjct: 203 TVLETYPGTPSTERALEIMATAYEELGQQKLKDHVLMVMQSNFPNNDMLK 252
>gi|167562572|ref|ZP_02355488.1| competence lipoprotein ComL [Burkholderia oklahomensis EO147]
gi|167569755|ref|ZP_02362629.1| competence lipoprotein ComL [Burkholderia oklahomensis C6786]
Length = 274
Score = 87.2 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 53/226 (23%), Positives = 92/226 (40%), Gaps = 10/226 (4%)
Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106
T ++Y +A L ++ K +YF PF A+++ + A+ +
Sbjct: 33 QKTDETAAWSNNKLYSEAQDALTGGDWGKCAKYFEALQGRDPFGHFAQQAQINVAYCNWK 92
Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATK 156
+ A + +I +P+ ++ Y YYL GM + D +A +
Sbjct: 93 DNEAAAADQAIDRFIQLHPDHPDIAYAYYLKGMIHFNDDLGLFGRFSGQDMSERDPQALR 152
Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
+V+RY S Y A + N LA+ EV YY +RG YVAAI R QL
Sbjct: 153 ESYDAFKVVVDRYPKSKYAPDAAARMRYIVNALASHEVHSADYYYRRGAYVAAINRAQLA 212
Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
+ Y +A E+A+ ++ +Y L A + ++ +P +
Sbjct: 213 IKEYKNAPAIEDALHIMMLSYAKLNQPQLADDTKRVLASTFPDSPY 258
>gi|222475440|ref|YP_002563857.1| hypothetical protein AMF_769 [Anaplasma marginale str. Florida]
gi|255003426|ref|ZP_05278390.1| hypothetical protein AmarPR_04180 [Anaplasma marginale str. Puerto
Rico]
gi|255004546|ref|ZP_05279347.1| hypothetical protein AmarV_04500 [Anaplasma marginale str.
Virginia]
gi|222419578|gb|ACM49601.1| Conserved hypothetical protein [Anaplasma marginale str. Florida]
Length = 309
Score = 86.8 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 68/241 (28%), Positives = 112/241 (46%), Gaps = 3/241 (1%)
Query: 30 IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89
+ LV + + ++YE + E + KA F++ +PF
Sbjct: 25 LLCAVLVILSILCTTHPVAAASFAEEGVHKLYEDGLRLFHEGRYKKAIAVFDKIEALYPF 84
Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
+ +A L++A Y G Y ++ASL E YI YP SK++DY YY+ ++ I D+
Sbjct: 85 SQMAIDGSLVAAVAHYELGNYAESASLAEGYIDSYPSSKSIDYAYYVRILAKYMQIPDLG 144
Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
DQ + V + NS ++ + + LAA+E IG++YLKRG ++AA
Sbjct: 145 LDQGVALEVRNLAYEFVRMFPNSRHLGEISKRLAAVQQHLAAREFMIGKFYLKRGGHIAA 204
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
+ RF+ +++ Y + + E + RLVEAY AL A +S + E W E L
Sbjct: 205 VKRFRALISAYPSSAYTNEGLYRLVEAYTALGDHKSAAAYLSKLDE---GNVWRARAERL 261
Query: 270 V 270
+
Sbjct: 262 L 262
>gi|299533527|ref|ZP_07046904.1| putative transmembrane protein [Comamonas testosteroni S44]
gi|298718485|gb|EFI59465.1| putative transmembrane protein [Comamonas testosteroni S44]
Length = 263
Score = 86.8 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 61/250 (24%), Positives = 100/250 (40%), Gaps = 17/250 (6%)
Query: 19 LYKFALTIF-FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
+ + +LT+ + L G D T +Y +A + KA
Sbjct: 1 MPRISLTLVPAVLIAATLAGCSSTK------DDPTAKWTPERIYTEARDESSSGAYDKAV 54
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY----- 132
F + +A+++ L A+ QY AG+ QA + + + +P S +DY
Sbjct: 55 PLFEKLEGRAAGTPLAQQAQLEKAYAQYKAGEKVQALATLDRFTKLHPASPAMDYALYLK 114
Query: 133 -----VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
L + DQ+A K + +V R+ +S Y AR + N
Sbjct: 115 GLVNFNDNLGMFGWLTRQDLSERDQKAAKDSFESFRELVTRFPDSKYSDDARQRMQYIVN 174
Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
LA EV + +YY RG YVAAI R Q + +Y + EAM LV++Y AL +
Sbjct: 175 SLAQYEVHVAKYYYSRGAYVAAIARAQAAIKDYQNVPAVREAMVILVKSYDALGMTQLRD 234
Query: 248 EVVSLIQERY 257
+ +++ Y
Sbjct: 235 DAQRVLESSY 244
>gi|46202602|ref|ZP_00052938.2| COG4105: DNA uptake lipoprotein [Magnetospirillum magnetotacticum
MS-1]
Length = 164
Score = 86.8 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 37/113 (32%), Positives = 62/113 (54%)
Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
++ + +V+R+ +S Y + AR + + R+ LA KE+ IGRYY G ++AA+ RF++V
Sbjct: 1 MKILHEVVDRFPSSVYARDARLKIDLARDHLAGKEMNIGRYYQNLGHHLAALNRFKMVAE 60
Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
Y H EA+ R+VE Y AL L EA +++ +P W + +
Sbjct: 61 QYQTTTHVPEALYRMVELYTALGLDQEAARAAAVLGHNFPGSDWYEDAYAMAE 113
>gi|330446993|ref|ZP_08310644.1| bamD [Photobacterium leiognathi subsp. mandapamensis svers.1.1.]
gi|328491184|dbj|GAA05141.1| bamD [Photobacterium leiognathi subsp. mandapamensis svers.1.1.]
Length = 242
Score = 86.8 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 53/246 (21%), Positives = 94/246 (38%), Gaps = 17/246 (6%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
LTI +AV L G + + V +Y A L+ N++ A E
Sbjct: 1 MKRLTITTLLAVALLSGCSSK-------EEVIPDVPPSNLYATAQTALQSGNWTSAIEQL 53
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
+PF + + L + Y + + E ++ P+ D+V Y+ G++
Sbjct: 54 EALDSRYPFGAYSDQVQLDLIYAYYKSDDLALGEATIERFLRLNPDHPQADWVVYMRGLT 113
Query: 141 YAQMIRDVPYDQRAT----------KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
+ R +D + ++ERY S Y A+ + +N+LA
Sbjct: 114 HMAQDRSFMHDMFNINRFDRDPTPSRQAFTDFKYLLERYPESEYGADAKARMIFLKNRLA 173
Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
++ +Y++R ++AAI R Q V Y D E A E++ AY L L E
Sbjct: 174 NYDLATADFYVRREAWIAAINRCQQVQRLYPDTEAARESLKLEKTAYEKLNLQKEVERTE 233
Query: 251 SLIQER 256
+++
Sbjct: 234 KMMKLN 239
>gi|332530534|ref|ZP_08406473.1| putative transmembrane protein [Hylemonella gracilis ATCC 19624]
gi|332040009|gb|EGI76396.1| putative transmembrane protein [Hylemonella gracilis ATCC 19624]
Length = 276
Score = 86.8 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 61/237 (25%), Positives = 101/237 (42%), Gaps = 16/237 (6%)
Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
D T E+ E+A ++ +++A F + +A+++
Sbjct: 25 CSSTP------DDPTAKMKPEEILEQAREEVRNFQYTQAVTLFEKLEGRAAGTPLAQQAQ 78
Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG----------MSYAQMIRD 147
L A+ QY + QA + + ++ +P S +DY YL G S+
Sbjct: 79 LEKAYAQYKDDQSAQAVATLDRFMRLHPASPAIDYALYLKGLVNFNDDLGLFSFITRQDL 138
Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
DQ A K + +V R+ +S Y AR + N LA EV + RYY KRG YV
Sbjct: 139 SERDQLAAKESWSAFNELVTRFPDSRYSADARARMVYIVNTLARYEVHVARYYFKRGAYV 198
Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
AAI R Q +A+Y A E+A+ LV++Y AL + + ++ +P + +
Sbjct: 199 AAINRAQQAVADYRTAPALEDALQILVDSYEALNMPQLRDDARRVLATNFPNSAYLK 255
>gi|331008768|gb|EGH88824.1| competence lipoprotein ComL [Pseudomonas syringae pv. tabaci ATCC
11528]
Length = 340
Score = 86.8 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 56/232 (24%), Positives = 101/232 (43%), Gaps = 17/232 (7%)
Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
+ + + + + E+Y++A L +++ A E +PF A ++
Sbjct: 18 CSSK-------EVIDENLSEVELYQQAQADLGNNSYNSATEKLKALESRYPFGRYADQAQ 70
Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------RD 147
L + Y G+ + A S E +I +P+ NVDY YY+ G++
Sbjct: 71 LELIYSNYKNGEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDVGLLARFLPLDQ 130
Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
D A + +++ R+ NS Y A+ + RN LA+ E+ + Y L R YV
Sbjct: 131 TKRDPGAARDSFNEFAQLTSRFPNSRYSPDAKQRMIYLRNLLASYEIHVADYSLTRQAYV 190
Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
AA R + V+ N+ + + +A +VE+Y L L D A + +++ YP
Sbjct: 191 AAANRGRYVVENFQETPSVGDGLAVMVESYQRLHLDDLAATSLEVLKTNYPN 242
>gi|323526135|ref|YP_004228288.1| outer membrane assembly lipoprotein YfiO [Burkholderia sp.
CCGE1001]
gi|323383137|gb|ADX55228.1| outer membrane assembly lipoprotein YfiO [Burkholderia sp.
CCGE1001]
Length = 286
Score = 86.8 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 54/226 (23%), Positives = 93/226 (41%), Gaps = 10/226 (4%)
Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106
T ++Y +A L +F K +YF PF A+++ + A+ +
Sbjct: 45 EKTDETATWNNNKLYTEANDALNGGDFGKCAKYFEMLEGRDPFGHFAQQAQINVAYCNWK 104
Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATK 156
+ A + +I +P+ ++ Y YYL GM + D ++ +
Sbjct: 105 DNETAAADQAIDRFIQLHPDHPDIAYAYYLKGMIHFNDDLGLFGRFSGQDMSERDPKSLR 164
Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
+V++Y NS Y A + N LA+ EV YY +RG YVAAI R QL
Sbjct: 165 ESYDAFKVVVDKYPNSKYAPDAAQRMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLA 224
Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
L Y +A E+A+ ++ +Y L A + ++ +P +
Sbjct: 225 LKEYKNAPAIEDALHIMMLSYQKLNQPQLADDTKRVLAGTFPDSPY 270
>gi|197116873|ref|YP_002137300.1| outer membrane protein assembly lipoprotein YfiO [Geobacter
bemidjiensis Bem]
gi|197086233|gb|ACH37504.1| outer membrane protein assembly lipoprotein YfiO, putative
[Geobacter bemidjiensis Bem]
Length = 256
Score = 86.4 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 42/254 (16%), Positives = 95/254 (37%), Gaps = 9/254 (3%)
Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
+ + A+C + V+ +++ +N+++A
Sbjct: 1 MQLRPLRHLALCSALCLISACAST---------PAPVKSADAHFKEGEAAYASRNYAEAI 51
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
E + + G+ ++ L A + Y +AA+ E++ +P Y Y +
Sbjct: 52 ESWKKVKESDTAPGLTSQAELKIADAHFENKAYIEAAAAYEDFRKLHPTHPQAPYALYRL 111
Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
+S+ Q I DQ K + + + +Y S Y + R++ A E +G
Sbjct: 112 ALSHYQQITGTDTDQTPVKNAVATLEAFLGQYPRSEYAPELSGKLADCRDKQLAYENYVG 171
Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
+YL+ +Y +AI R L + ++ + L +AY+ + + + V+ + +
Sbjct: 172 NFYLRTEKYQSAIKRLNEALVRFPGLTRLDDTLFYLGKAYLKAGDVKQGKVVLQRLAAEH 231
Query: 258 PQGYWARYVETLVK 271
P + L++
Sbjct: 232 PGSPRNKEAAALLQ 245
>gi|83815586|ref|YP_446179.1| TPR repeat-containing protein [Salinibacter ruber DSM 13855]
gi|294508105|ref|YP_003572163.1| Conserved hypothetical protein containing tetratricopeptide repeat
domain [Salinibacter ruber M8]
gi|83756980|gb|ABC45093.1| tetratricopeptide repeat domain protein [Salinibacter ruber DSM
13855]
gi|294344433|emb|CBH25211.1| Conserved hypothetical protein containing tetratricopeptide repeat
domain [Salinibacter ruber M8]
Length = 284
Score = 86.4 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 48/254 (18%), Positives = 88/254 (34%), Gaps = 18/254 (7%)
Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85
+ + LVG + E Y+K V ++E + +A +F
Sbjct: 9 VLLFALLGALVGCSGGTE--------LTYSGPEEAYKKGVAEMEEGDHQQAIRFFRAVFE 60
Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
A + A Q K+ AA+ + + Y + + + SY
Sbjct: 61 YGRGNEWAPDARFKLAMAQRGLNKHLVAANEFQRFTQLYRNDELLPRAEFERANSYYLRS 120
Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
DQ ++ + ++R+ N V A + R +LA K+ E GR Y +R
Sbjct: 121 PSYRLDQSDSEQAISLFRLFIDRHPNHELVPEAEEKINELRAKLARKKYEAGRLYEQRDM 180
Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL----------MDEAREVVSLIQE 255
+ AA ++ Y D A++A+ V Y+ A +A E + + +
Sbjct: 181 WQAATTVYERAFDQYPDTPWADDALLGAVRTYIRYADRSVESKQAERYQKAIENYNRLTQ 240
Query: 256 RYPQGYWARYVETL 269
+P+ E L
Sbjct: 241 LFPESTLLGRAEDL 254
>gi|58617537|ref|YP_196736.1| hypothetical protein ERGA_CDS_08100 [Ehrlichia ruminantium str.
Gardel]
gi|58417149|emb|CAI28262.1| Conserved hypothetical protein [Ehrlichia ruminantium str. Gardel]
Length = 250
Score = 86.4 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 73/249 (29%), Positives = 121/249 (48%), Gaps = 2/249 (0%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
K I I+ F+V S + + R +YE A+ + + A +
Sbjct: 4 LKVFKNILVLISCLFIVSCVFLSKE--RVVKSVENRTADGIYESALKKSSNKQYKDAVKD 61
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
+ +PF+ VA K+ +M +F+ Y Y +AA+ E+YI YP+S+++D YYL M
Sbjct: 62 LEEIDSLYPFSPVAIKARIMMSFLNYELENYSRAATYAEDYINLYPDSEDIDVAYYLRIM 121
Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
+ I D+ DQ + + + V + NS Y++ + + +AAKE IG++
Sbjct: 122 ANYMQINDIDRDQSVAYKVSELLDEFVRLFPNSQYLEEVNLRLNMVHEHIAAKEFSIGKF 181
Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
YL+RGEYVAAI RF +L Y + + E++ R EAY++L D ++ +SL+QE
Sbjct: 182 YLQRGEYVAAIRRFSTILKRYKNTRYFPESVYRTAEAYLSLGDKDAYKKYISLLQECCVG 241
Query: 260 GYWARYVET 268
W
Sbjct: 242 SEWYVLSHN 250
>gi|330962680|gb|EGH62940.1| competence lipoprotein ComL [Pseudomonas syringae pv. maculicola
str. ES4326]
Length = 340
Score = 86.4 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 58/238 (24%), Positives = 102/238 (42%), Gaps = 17/238 (7%)
Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
+ + + + + E+Y++A L +++ A E +PF A ++
Sbjct: 18 CSSK-------EVIDENLSEVELYQQAQADLGNNSYNSATEKLKALESRYPFGRYADQAQ 70
Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------RD 147
L + Y G+ + A S E +I +P+ NVDY YY+ G++
Sbjct: 71 LELIYSNYKNGEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDVGLLARFLPLDQ 130
Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
D A + +++ RY NS Y A+ + RN LA+ E+ + YYL R YV
Sbjct: 131 TKRDPGAARDSFNEFAQLTSRYPNSRYAPDAKQRMIYLRNLLASYEIHVADYYLTRQAYV 190
Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
AA R + V+ N+ + + +A +VE+Y L L D A + +++ YP
Sbjct: 191 AAANRGRYVVENFQETPSVGDGLAVMVESYQRLHLDDLAATSLEVLKTNYPNHPQLED 248
>gi|330811804|ref|YP_004356266.1| DNA uptake lipoprotein (ComL) [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327379912|gb|AEA71262.1| Putative DNA uptake lipoprotein (ComL) [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
Length = 338
Score = 86.4 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 56/232 (24%), Positives = 98/232 (42%), Gaps = 17/232 (7%)
Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
+ + V + + E+Y++A L +++ A +PF A ++
Sbjct: 18 CSSK-------EVVDENLSEVELYQQAQNDLDNNSYTSATAKLKALESRYPFGRYADQAQ 70
Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------RD 147
L + Y + + A S E +I +P+ NVDY YYL G++
Sbjct: 71 LELIYANYKNAEPEAAKSAAERFIRLHPQHPNVDYAYYLKGLTSFDQDVGLLARFLPLDM 130
Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
D A + +++ R+ NS Y A+ + RN LA+ E+ + YYL R YV
Sbjct: 131 TKRDPGAARDSYNEFAQLTSRFPNSRYSPDAKQRMIYLRNLLASYEIHVADYYLTRQAYV 190
Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
AA R + V+ N+ + + +A + EAY L L + A + ++ YP
Sbjct: 191 AAANRGRYVVENFQETPSVGDGLAVMTEAYQRLHLDELAATSLETLKLNYPD 242
>gi|160872537|ref|ZP_02062669.1| competence lipoprotein ComL [Rickettsiella grylli]
gi|159121336|gb|EDP46674.1| competence lipoprotein ComL [Rickettsiella grylli]
Length = 250
Score = 86.4 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 60/252 (23%), Positives = 104/252 (41%), Gaps = 13/252 (5%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K + + L S+ + +VY+ A L + FS+A +
Sbjct: 1 MKKINIVFLVGFIMALLSACASHSNNPFIAFK---GQTVSQVYQNARASLLDGEFSQAIK 57
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+ + +PF + K+ L + Y G A + + +I YP S+ +DY YY+
Sbjct: 58 SYEALAVLYPFNRYSEKAQLGLIYAYYKDGDSPSAKTAAQRFIYLYPHSQYIDYAYYMRA 117
Query: 139 MSYAQMIRDVPYDQRA----------TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
M+ R +L Q + ++ RY +SPYV AR + RN
Sbjct: 118 MADMDQDRGWYLRYVPIDLALRDPGTMRLAYQEFAELIRRYPDSPYVPDARQRMIYLRNL 177
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
A E+ I YY +R Y+AA R ++ Y A + A+ +++AY L L AR+
Sbjct: 178 FARYELHIADYYFRRKAYIAAANRANEIIQQYQGAPEVKHALMIMIKAYRILGLETLARQ 237
Query: 249 VVSLIQERYPQG 260
+++ + YP
Sbjct: 238 SLAIYRLNYPDS 249
Score = 37.9 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 17/89 (19%), Positives = 31/89 (34%)
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
+ Q ++ + R L GE+ AI ++ + Y ++E+A L+ AY
Sbjct: 25 NNPFIAFKGQTVSQVYQNARASLLDGEFSQAIKSYEALAVLYPFNRYSEKAQLGLIYAYY 84
Query: 239 ALALMDEAREVVSLIQERYPQGYWARYVE 267
A+ YP + Y
Sbjct: 85 KDGDSPSAKTAAQRFIYLYPHSQYIDYAY 113
>gi|32035196|ref|ZP_00135230.1| COG4105: DNA uptake lipoprotein [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|126208591|ref|YP_001053816.1| putative lipoprotein [Actinobacillus pleuropneumoniae L20]
gi|165976547|ref|YP_001652140.1| putative lipoprotein [Actinobacillus pleuropneumoniae serovar 3
str. JL03]
gi|303250130|ref|ZP_07336332.1| putative lipoprotein [Actinobacillus pleuropneumoniae serovar 6
str. Femo]
gi|303253304|ref|ZP_07339453.1| putative lipoprotein [Actinobacillus pleuropneumoniae serovar 2
str. 4226]
gi|307246036|ref|ZP_07528118.1| hypothetical protein appser1_12390 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|307248144|ref|ZP_07530172.1| hypothetical protein appser2_11250 [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|307250377|ref|ZP_07532325.1| hypothetical protein appser4_11570 [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|307252759|ref|ZP_07534650.1| hypothetical protein appser6_12730 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307255018|ref|ZP_07536836.1| hypothetical protein appser9_12520 [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|307257174|ref|ZP_07538946.1| hypothetical protein appser10_11740 [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|307259454|ref|ZP_07541179.1| hypothetical protein appser11_12510 [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|307261603|ref|ZP_07543271.1| hypothetical protein appser12_11640 [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
gi|126097383|gb|ABN74211.1| putative lipoprotein [Actinobacillus pleuropneumoniae serovar 5b
str. L20]
gi|165876648|gb|ABY69696.1| conserved putative lipoprotein [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|302647986|gb|EFL78193.1| putative lipoprotein [Actinobacillus pleuropneumoniae serovar 2
str. 4226]
gi|302651193|gb|EFL81347.1| putative lipoprotein [Actinobacillus pleuropneumoniae serovar 6
str. Femo]
gi|306852971|gb|EFM85194.1| hypothetical protein appser1_12390 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306855321|gb|EFM87496.1| hypothetical protein appser2_11250 [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|306857587|gb|EFM89695.1| hypothetical protein appser4_11570 [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|306859791|gb|EFM91813.1| hypothetical protein appser6_12730 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306861891|gb|EFM93867.1| hypothetical protein appser9_12520 [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306864336|gb|EFM96247.1| hypothetical protein appser10_11740 [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|306866390|gb|EFM98253.1| hypothetical protein appser11_12510 [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|306868726|gb|EFN00535.1| hypothetical protein appser12_11640 [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
Length = 258
Score = 86.4 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 53/264 (20%), Positives = 111/264 (42%), Gaps = 21/264 (7%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ KF +A +VG + + +++Y K +L++ +++ A
Sbjct: 1 MRKFTSLASLVLAGLLVVGCSSANKE-------LEETSAQDLYTKGQTYLQDGDYNSAIR 53
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY--- 135
Y + ++ L F Y G+Y +A E ++ YP S ++DYVYY
Sbjct: 54 YLDAIGAKGGQGTFGEQTQLSLIFANYKIGEYYKALDAAERFVRAYPNSASMDYVYYLAG 113
Query: 136 -------LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
+ + + + IV+ Y S Y + A+ ++ N+
Sbjct: 114 LSNARLGDNFIQDFFGVNRASRALDSVRNAYGSFQTIVQHYPQSQYARDAQNWMAYLINR 173
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
+A E+ I ++Y +R YVA + R + ++ Y +++ +A++ + +AY + + D A +
Sbjct: 174 MAEHELSIVKFYDEREAYVAVVNRVEEMMRFYPESKPTYQALSYMQKAYEQMGVKDSAEK 233
Query: 249 VVSLIQ----ERYPQGYWARYVET 268
V +LI+ + +P+ Y E
Sbjct: 234 VAALIEANKDKNFPEAIKPEYSEQ 257
>gi|298485412|ref|ZP_07003501.1| Competence lipoprotein ComL [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
gi|298160062|gb|EFI01094.1| Competence lipoprotein ComL [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
Length = 340
Score = 86.4 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 57/232 (24%), Positives = 102/232 (43%), Gaps = 17/232 (7%)
Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
+ + + + + E+Y++A L +++ A E +PF A ++
Sbjct: 18 CSSK-------EVIDENLSEVELYQQAQADLGNNSYNSATEKLKALESRYPFGRYADQAQ 70
Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------RD 147
L + Y G+ + A S E +I +P+ NVDY YY+ G++
Sbjct: 71 LELIYSNYKNGEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDVGLLARFLPLDQ 130
Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
D A + +++ R+ NS Y A+ + RN LA+ E+ + YYL R YV
Sbjct: 131 TKRDPGAARDSFNEFAQLTSRFPNSRYSPDAKQRMIYLRNLLASYEIHVADYYLTRQAYV 190
Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
AA R + V+ N+ + + +A +VE+Y L L D A + +++ YP
Sbjct: 191 AAANRGRYVVENFQETPSVGDGLAVMVESYQRLHLDDLAATSLEVLKTNYPN 242
>gi|190150448|ref|YP_001968973.1| lipoprotein [Actinobacillus pleuropneumoniae serovar 7 str. AP76]
gi|307263792|ref|ZP_07545398.1| hypothetical protein appser13_12030 [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
gi|189915579|gb|ACE61831.1| putative lipoprotein [Actinobacillus pleuropneumoniae serovar 7
str. AP76]
gi|306870913|gb|EFN02651.1| hypothetical protein appser13_12030 [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
Length = 258
Score = 86.4 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 53/264 (20%), Positives = 112/264 (42%), Gaps = 21/264 (7%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ KF +A +VG + + +++Y K +L++ +++ A
Sbjct: 1 MRKFTSLASLVLAGLLVVGCSSANKE-------LEETSAQDLYTKGQTYLQDGDYNSAIR 53
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY--- 135
Y + + ++ L F Y G+Y +A E ++ YP S ++DYVYY
Sbjct: 54 YLDAIGAKGGQGTLGEQTQLSLIFANYKIGEYYKALDAAERFVRAYPNSASMDYVYYLAG 113
Query: 136 -------LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
+ + + + IV+ Y S Y + A+ ++ N+
Sbjct: 114 LSNARLGDNFIQDFFGVNRASRALDSVRNAYGSFQTIVQHYPQSQYARDAQNWMAYLINR 173
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
+A E+ I ++Y +R YVA + R + ++ Y +++ +A++ + +AY + + D A +
Sbjct: 174 MAEHELSIVKFYDEREAYVAVVNRVEEMMRFYPESKPTYQALSYMQKAYEQMGVKDSAEK 233
Query: 249 VVSLIQ----ERYPQGYWARYVET 268
V +LI+ + +P+ Y E
Sbjct: 234 VAALIEANKDKNFPEAIKPEYSEQ 257
>gi|302185254|ref|ZP_07261927.1| competence lipoprotein ComL, putative [Pseudomonas syringae pv.
syringae 642]
Length = 340
Score = 86.4 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 57/232 (24%), Positives = 102/232 (43%), Gaps = 17/232 (7%)
Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
+ + + + + E+Y++A L +++ A E +PF A ++
Sbjct: 18 CSSK-------EVIDENLSEVELYQQAQADLGNNSYNSATEKLKALESRYPFGRYADQAQ 70
Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------RD 147
L + Y G+ + A S E +I +P+ NVDY YY+ G++
Sbjct: 71 LELIYSNYKNGEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDVGLLARFLPLDQ 130
Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
D A + +++ R+ NS Y A+ + RN LA+ E+ + YYL R YV
Sbjct: 131 TKRDPGAARDSFNEFAQLTSRFPNSRYSPDAKQRMIYLRNLLASYEIHVADYYLTRQAYV 190
Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
AA R + V+ N+ + + +A +VE+Y L L D A + +++ YP
Sbjct: 191 AAANRGRYVVENFQETPSVGDGLAVMVESYQRLHLDDLAATSLEVLKTNYPN 242
>gi|90414901|ref|ZP_01222866.1| hypothetical protein P3TCK_25174 [Photobacterium profundum 3TCK]
gi|90324015|gb|EAS40609.1| hypothetical protein P3TCK_25174 [Photobacterium profundum 3TCK]
Length = 242
Score = 86.4 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 51/246 (20%), Positives = 94/246 (38%), Gaps = 17/246 (6%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
LTI +AV L G + V E+Y A L+ +++ A E
Sbjct: 1 MKRLTITTLLAVAILSGCSST-------EEVVPDIPPAELYVTAQQALQSGSWTTAIERL 53
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
+PF + + L + Y + + P + D+V Y+ G++
Sbjct: 54 ETLDSRYPFGAYSEQVQLDLIYAYYKNDDLALGEATIARFNRLNPAHEKSDWVLYMRGLT 113
Query: 141 YAQMIRDVPYD----------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
R +D + + R+++RY NS Y A+ + +N+LA
Sbjct: 114 QMAQDRSFMHDIFSIDRHDRDPEPARKAFRDFKRLLDRYPNSQYAADAKARMIFIKNRLA 173
Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
++ +Y++R ++AAI R Q + Y D + A +++ ++ AY L L +
Sbjct: 174 DYDLATVDFYIRREAWIAAINRSQQIQRLYPDTQAARKSLPLMLTAYEKLGLQEPIENTK 233
Query: 251 SLIQER 256
LI
Sbjct: 234 KLIALN 239
>gi|261856620|ref|YP_003263903.1| outer membrane assembly lipoprotein YfiO [Halothiobacillus
neapolitanus c2]
gi|261837089|gb|ACX96856.1| outer membrane assembly lipoprotein YfiO [Halothiobacillus
neapolitanus c2]
Length = 273
Score = 86.0 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 60/247 (24%), Positives = 103/247 (41%), Gaps = 12/247 (4%)
Query: 21 KFALTIFFSIAVCFLVGWE--RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
K I + A+ G ++S + ++Y++A ++ ++ A +
Sbjct: 15 KLYSGILLAAAIGLTSGCSWFSKNSDQDQAELADPTVSAAQLYDEASSAMRRDDYGTAIK 74
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
F +PF ++ L A+ Y + A + + YI +P+ KNVDY Y+ G
Sbjct: 75 KFETLEGRYPFGAYTEQAQLEVAYAYYKYNEPDSAIAAADRYIQIHPQGKNVDYALYIKG 134
Query: 139 MSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
+S DQ S +V R+ +S YV A + RN
Sbjct: 135 LSNMDRGDSLINKIAKPNLAYRDQSILHNAYAAFSELVTRFPDSKYVDDASVRLIKIRND 194
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
LA E+ + RYY+KRG ++AA R Q L+ Y+ + A+ L+ AY L L EA +
Sbjct: 195 LAEHEIYVARYYMKRGAWLAAANRAQTALSKYNGSTSTIPALEILISAYKKLGLKTEAAD 254
Query: 249 VVSLIQE 255
+++
Sbjct: 255 AEQILKA 261
>gi|71736201|ref|YP_273031.1| competence lipoprotein ComL [Pseudomonas syringae pv. phaseolicola
1448A]
gi|289626966|ref|ZP_06459920.1| competence lipoprotein ComL [Pseudomonas syringae pv. aesculi str.
NCPPB3681]
gi|289651378|ref|ZP_06482721.1| competence lipoprotein ComL [Pseudomonas syringae pv. aesculi str.
2250]
gi|71556754|gb|AAZ35965.1| competence lipoprotein ComL [Pseudomonas syringae pv. phaseolicola
1448A]
gi|330869190|gb|EGH03899.1| competence lipoprotein ComL [Pseudomonas syringae pv. aesculi str.
0893_23]
gi|330891574|gb|EGH24235.1| competence lipoprotein ComL [Pseudomonas syringae pv. mori str.
301020]
gi|330988805|gb|EGH86908.1| competence lipoprotein ComL [Pseudomonas syringae pv. lachrymans
str. M301315]
Length = 340
Score = 86.0 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 57/232 (24%), Positives = 102/232 (43%), Gaps = 17/232 (7%)
Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
+ + + + + E+Y++A L +++ A E +PF A ++
Sbjct: 18 CSSK-------EVIDENLSEVELYQQAQADLGNNSYNSATEKLKALESRYPFGRYADQAQ 70
Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------RD 147
L + Y G+ + A S E +I +P+ NVDY YY+ G++
Sbjct: 71 LELIYSNYKNGEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDVGLLARFLPLDQ 130
Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
D A + +++ R+ NS Y A+ + RN LA+ E+ + YYL R YV
Sbjct: 131 TKRDPGAARDSFNEFAQLTSRFPNSRYSPDAKQRMIYLRNLLASYEIHVADYYLTRQAYV 190
Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
AA R + V+ N+ + + +A +VE+Y L L D A + +++ YP
Sbjct: 191 AAANRGRYVVENFQETPSVGDGLAVMVESYQRLHLDDLAATSLEVLKTNYPN 242
>gi|320326248|gb|EFW82302.1| competence lipoprotein ComL [Pseudomonas syringae pv. glycinea str.
B076]
gi|320330672|gb|EFW86649.1| competence lipoprotein ComL [Pseudomonas syringae pv. glycinea str.
race 4]
gi|330881341|gb|EGH15490.1| competence lipoprotein ComL [Pseudomonas syringae pv. glycinea str.
race 4]
Length = 340
Score = 86.0 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 56/232 (24%), Positives = 102/232 (43%), Gaps = 17/232 (7%)
Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
+ + + + + E+Y++A L +++ A E +PF A ++
Sbjct: 18 CSSK-------EVIDENLSEVELYQQAQADLGNNSYNSATEKLKALESRYPFGRYADQAQ 70
Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------RD 147
L + Y G+ + A S E +I +P+ NVDY YY+ G++
Sbjct: 71 LELIYSNYKNGEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDVGLLARFLPLDQ 130
Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
D A + +++ R+ NS Y A+ + R+ LA+ E+ + YYL R YV
Sbjct: 131 TKRDPGAARDSFNEFAQLTSRFPNSRYSPDAKQRMIYLRSLLASYEIHVADYYLTRQAYV 190
Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
AA R + V+ N+ + + +A +VE+Y L L D A + +++ YP
Sbjct: 191 AAANRGRYVVENFQETPSVGDGLAVMVESYQRLHLDDLAATSLEVLKTNYPN 242
>gi|254995247|ref|ZP_05277437.1| hypothetical protein AmarM_04700 [Anaplasma marginale str.
Mississippi]
Length = 289
Score = 86.0 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 68/241 (28%), Positives = 112/241 (46%), Gaps = 3/241 (1%)
Query: 30 IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89
+ LV + + ++YE + E + KA F++ +PF
Sbjct: 25 LLCAVLVILSILCTTHPVAAASFAEEGVHKLYEDGLRLFHEGRYKKAIAVFDKIEALYPF 84
Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
+ +A L++A Y G Y ++ASL E YI YP SK++DY YY+ ++ I D+
Sbjct: 85 SQMAIDGSLVAAVAHYELGNYAESASLAEGYIDSYPSSKSIDYAYYVRILAKYMQIPDLG 144
Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
DQ + V + NS ++ + + LAA+E IG++YLKRG ++AA
Sbjct: 145 LDQGVALEVRNLAYEFVRMFPNSRHLGEISKRLAAVQQHLAAREFMIGKFYLKRGGHIAA 204
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
+ RF+ +++ Y + + E + RLVEAY AL A +S + E W E L
Sbjct: 205 VKRFRALISAYPSSAYTNEGLYRLVEAYTALGDHKSAAAYLSKLDE---GNVWRARAERL 261
Query: 270 V 270
+
Sbjct: 262 L 262
>gi|110833336|ref|YP_692195.1| competence lipoprotein ComL [Alcanivorax borkumensis SK2]
gi|110646447|emb|CAL15923.1| competence lipoprotein ComL, putative [Alcanivorax borkumensis SK2]
Length = 272
Score = 86.0 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 51/227 (22%), Positives = 93/227 (40%), Gaps = 10/227 (4%)
Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
+ + Y +A ++ +N+ A + + FP+ A +S L + QY +
Sbjct: 21 PEDRPELTEADQYREARESIESKNYLTAIDQLKELEARFPYGDYAEQSALDLIYAQYKSV 80
Query: 109 KYQQAASLGEEYITQYPESKNVDY----------VYYLVGMSYAQMIRDVPYDQRATKLM 158
Y + ++ +P +DY D A K
Sbjct: 81 DYPATVVAAQRFMRNHPAHPRMDYALYMRGLANFNMEKGLFDNMVASDRSSKDMAAAKDA 140
Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
+ R+V R+ +S Y AR + RNQLA +E+ + RYY +RG VA++ R Q V+
Sbjct: 141 FRDFERLVSRFPDSEYAPDARARMVHIRNQLARQELHVARYYARRGAIVASLNRAQYVVK 200
Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
+Y EE++A +V+ Y L L +A + +++ +P +
Sbjct: 201 HYQHTPAVEESLAIMVKGYQRLELPKQAEKSRAVLALNWPNSTFLDD 247
>gi|213971043|ref|ZP_03399163.1| competence lipoprotein ComL [Pseudomonas syringae pv. tomato T1]
gi|301384234|ref|ZP_07232652.1| competence lipoprotein ComL, putative [Pseudomonas syringae pv.
tomato Max13]
gi|302059467|ref|ZP_07251008.1| competence lipoprotein ComL, putative [Pseudomonas syringae pv.
tomato K40]
gi|302134991|ref|ZP_07260981.1| competence lipoprotein ComL, putative [Pseudomonas syringae pv.
tomato NCPPB 1108]
gi|213924151|gb|EEB57726.1| competence lipoprotein ComL [Pseudomonas syringae pv. tomato T1]
gi|331018388|gb|EGH98444.1| competence lipoprotein ComL, putative [Pseudomonas syringae pv.
lachrymans str. M302278PT]
Length = 340
Score = 86.0 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 58/232 (25%), Positives = 102/232 (43%), Gaps = 17/232 (7%)
Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
+ + + + + E+Y++A L +++ A E +PF A ++
Sbjct: 18 CSSK-------EVIDENLSEVELYQQAQADLGNNSYNSATEKLKALESRYPFGRYADQAQ 70
Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------RD 147
L + Y G+ + A S E +I +P+ NVDY YY+ G++
Sbjct: 71 LELIYSNYKNGEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDVGLLARFLPLDQ 130
Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
D A + +++ RY NS Y A+ + RN LA+ E+ + YYL R YV
Sbjct: 131 TKRDPGAARDSFNEFAQLTSRYPNSRYSPDAKQRMIYLRNLLASYEIHVADYYLTRQAYV 190
Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
AA R + V+ N+ + + +A +VE+Y L L D A + +++ YP
Sbjct: 191 AAANRGRYVVENFQETPSVGDGLAVMVESYQRLHLDDLAATSLEVLKTNYPN 242
>gi|187923830|ref|YP_001895472.1| outer membrane assembly lipoprotein YfiO [Burkholderia phytofirmans
PsJN]
gi|187715024|gb|ACD16248.1| outer membrane assembly lipoprotein YfiO [Burkholderia phytofirmans
PsJN]
Length = 286
Score = 86.0 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 54/226 (23%), Positives = 93/226 (41%), Gaps = 10/226 (4%)
Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106
T ++Y +A L +F K +YF PF A+++ + A+ +
Sbjct: 45 EKTDETATWNNNKLYTEANDALSGGDFGKCAKYFEMLEGRDPFGHFAQQAQINVAYCNWK 104
Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATK 156
+ A + +I +P+ ++ Y YYL GM + D ++ +
Sbjct: 105 DNENAAADQAIDRFIQLHPDHPDIAYAYYLKGMIHFNDDLGLFGRFSGQDMSERDPKSLR 164
Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
+V++Y NS Y A + N LA+ EV YY +RG YVAAI R QL
Sbjct: 165 ESYDAFKVVVDKYPNSKYAPDAAQRMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLA 224
Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
L Y +A E+A+ ++ +Y L A + ++ +P +
Sbjct: 225 LTQYKNAPAIEDALHIMMLSYEKLNQPQLADDTKRVLAGTFPDSPY 270
>gi|330878988|gb|EGH13137.1| competence lipoprotein ComL [Pseudomonas syringae pv. morsprunorum
str. M302280PT]
Length = 340
Score = 86.0 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 58/232 (25%), Positives = 102/232 (43%), Gaps = 17/232 (7%)
Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
+ + + + + E+Y++A L +++ A E +PF A ++
Sbjct: 18 CSSK-------EVIDENLSEVELYQQAQADLGNNSYNSATEKLKALESRYPFGRYADQAQ 70
Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------RD 147
L + Y G+ + A S E +I +P+ NVDY YY+ G++
Sbjct: 71 LELIYSNYKNGEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDVGLLARFLPLDQ 130
Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
D A + +++ RY NS Y A+ + RN LA+ E+ + YYL R YV
Sbjct: 131 TKRDPGAARDSFNEFAQLTSRYPNSRYSPDAKQRMIYLRNLLASYEIHVADYYLTRQAYV 190
Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
AA R + V+ N+ + + +A +VE+Y L L D A + +++ YP
Sbjct: 191 AAANRGRYVVENFQETPSVGDGLAVMVESYQRLHLDDLAATSLEVLKTNYPN 242
>gi|330966363|gb|EGH66623.1| competence lipoprotein ComL [Pseudomonas syringae pv. actinidiae
str. M302091]
Length = 340
Score = 86.0 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 58/232 (25%), Positives = 102/232 (43%), Gaps = 17/232 (7%)
Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
+ + + + + E+Y++A L +++ A E +PF A ++
Sbjct: 18 CSSK-------EVIDENLSEVELYQQAQADLGNNSYNSATEKLKALESRYPFGRYADQAQ 70
Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------RD 147
L + Y G+ + A S E +I +P+ NVDY YY+ G++
Sbjct: 71 LELIYSNYKNGEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDVGLLARFLPLDQ 130
Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
D A + +++ RY NS Y A+ + RN LA+ E+ + YYL R YV
Sbjct: 131 TKRDPGAARDSFNEFAQLTSRYPNSRYSPDAKQRMIYLRNLLASYEIHVADYYLTRQAYV 190
Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
AA R + V+ N+ + + +A +VE+Y L L D A + +++ YP
Sbjct: 191 AAANRGRYVVENFQETPSVGDGLAVMVESYQRLHLDDLAATSLEVLKTNYPN 242
>gi|237801869|ref|ZP_04590330.1| competence lipoprotein ComL, putative [Pseudomonas syringae pv.
oryzae str. 1_6]
gi|331024727|gb|EGI04783.1| competence lipoprotein ComL, putative [Pseudomonas syringae pv.
oryzae str. 1_6]
Length = 340
Score = 86.0 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 57/232 (24%), Positives = 102/232 (43%), Gaps = 17/232 (7%)
Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
+ + + + + E+Y++A L +++ A E +PF A ++
Sbjct: 18 CSSK-------EVIDENLSEVELYQQAQADLGNNSYNSATEKLKALESRYPFGRYADQAQ 70
Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------RD 147
L + Y G+ + A S E +I +P+ NVDY YY+ G++
Sbjct: 71 LELIYSNYKNGEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDVGLLARFLPLDQ 130
Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
D A + +++ R+ NS Y A+ + RN LA+ E+ + YYL R YV
Sbjct: 131 TKRDPGAARDSFNEFAQLTSRFPNSRYAPDAKQRMIYLRNLLASYEIHVADYYLTRQAYV 190
Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
AA R + V+ N+ + + +A +VE+Y L L D A + +++ YP
Sbjct: 191 AAANRGRYVVENFQETPSVGDGLAVMVESYQRLHLDDLAATSLEVLKTNYPN 242
>gi|325577680|ref|ZP_08147955.1| competence lipoprotein ComL [Haemophilus parainfluenzae ATCC 33392]
gi|325160425|gb|EGC72551.1| competence lipoprotein ComL [Haemophilus parainfluenzae ATCC 33392]
Length = 273
Score = 86.0 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 50/258 (19%), Positives = 96/258 (37%), Gaps = 17/258 (6%)
Query: 9 ICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFL 68
+ + ++ K ++ + + + ++Y K L
Sbjct: 1 MIFVKIKEKRMRKIKSLALIALTSFAIAACSSGNKE-------VEQASVDDLYAKGAAAL 53
Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
+E ++S + Y + FP + +++L + Y Y + Y+ Q+P+S
Sbjct: 54 QEGSYSDSIRYLKAATERFPGSTYQEQAMLDLIYANYKTQDYTATLVTVDNYLHQFPQSP 113
Query: 129 NVDYVYYL----------VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
N DY Y+ + I + + K +V + NSPY + A
Sbjct: 114 NRDYAVYMAGLTNLATADNMIQDFFGIDRATRETTSMKTAFSNFQSLVRAFPNSPYSQDA 173
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
+ ++ LA E+EI ++Y KR +VA R +L Y DA+ E + + EAY
Sbjct: 174 VARMAYIKDSLARHELEIAKFYAKRDAWVAVANRVVGMLQQYPDAKATYEGLFLMKEAYE 233
Query: 239 ALALMDEAREVVSLIQER 256
+ L A + +I
Sbjct: 234 KMGLQQLASQTQQVIDAN 251
>gi|91227646|ref|ZP_01261923.1| hypothetical protein V12G01_13214 [Vibrio alginolyticus 12G01]
gi|91188425|gb|EAS74719.1| hypothetical protein V12G01_13214 [Vibrio alginolyticus 12G01]
Length = 242
Score = 86.0 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 54/238 (22%), Positives = 98/238 (41%), Gaps = 17/238 (7%)
Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
+AV L G + + + E+Y A + L+ N+ A E +P
Sbjct: 9 LLAVSLLFGCASK-------EEIVPDVPPSELYADAQISLQSGNWLSAIEKLEALDSRYP 61
Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
F + + L + Y + ++ P + +D+V Y+ G+S+ R+
Sbjct: 62 FGAYSEQVQLDLIYAYYKNDDLALGLATISRFMRLNPTHEKMDWVLYMRGLSHMAQDRNF 121
Query: 149 PYD----------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
+D K ++++RY NSPY + ++ + +N+LA ++
Sbjct: 122 MHDLFSVDRSDRDPEPVKKAFDDFKKLLQRYPNSPYAEDSQKRMVALKNRLANYDLATAD 181
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
+YL+R +VAAI R Q + Y D E A +++ +EAY L L D LI+
Sbjct: 182 FYLRREAWVAAINRSQELQKAYPDTEAARKSLTIQLEAYKQLGLEDAVARTEKLIELN 239
>gi|289674869|ref|ZP_06495759.1| competence lipoprotein ComL, putative [Pseudomonas syringae pv.
syringae FF5]
gi|330941211|gb|EGH44079.1| competence lipoprotein ComL, putative [Pseudomonas syringae pv.
pisi str. 1704B]
Length = 340
Score = 86.0 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 57/232 (24%), Positives = 102/232 (43%), Gaps = 17/232 (7%)
Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
+ + + + + E+Y++A L +++ A E +PF A ++
Sbjct: 18 CSSK-------EVIDENLSEVELYQQAQADLGNNSYNSATEKLKALESRYPFGRYADQAQ 70
Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------RD 147
L + Y G+ + A S E +I +P+ NVDY YY+ G++
Sbjct: 71 LELIYSNYKNGEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDVGLLARFLPLDQ 130
Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
D A + +++ R+ NS Y A+ + RN LA+ E+ + YYL R YV
Sbjct: 131 TKRDPGAARDSFNEFAQLTSRFPNSRYAPDAKQRMIYLRNLLASYEIHVADYYLTRQAYV 190
Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
AA R + V+ N+ + + +A +VE+Y L L D A + +++ YP
Sbjct: 191 AAANRGRYVVENFQETPSVGDGLAVMVESYQRLHLDDLAATSLEVLKTNYPN 242
>gi|77919977|ref|YP_357792.1| TPR domain-containing protein [Pelobacter carbinolicus DSM 2380]
gi|77546060|gb|ABA89622.1| TPR domain protein [Pelobacter carbinolicus DSM 2380]
Length = 245
Score = 86.0 bits (210), Expect = 6e-15, Method: Composition-based stats.
Identities = 50/249 (20%), Positives = 105/249 (42%), Gaps = 8/249 (3%)
Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
I F C L + V + + E + + L +++ A + + +
Sbjct: 2 KFIIAFLSVACLLTACSTAT--------VPEAKTAEEYFNRGELAFANEDYQDAIKSYEK 53
Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
+ A + R++ L A ++ Y +AA+ E+++ ++P + V + +G SY
Sbjct: 54 AMEIYETAALNRRAELRIADAHFANKDYVEAAAGYEDFLKRHPGTPQSARVLFQLGESYF 113
Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
I + DQ AT+ L +++ Y ++P + A V +N LAA E+ +G +Y K
Sbjct: 114 NQILAIDRDQTATRNALVTFESLIKIYPDAPESRIAPERVRACKNHLAANELYVGLFYYK 173
Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
++ AAI R +L Y + ++ L ++ + A + +P+
Sbjct: 174 FEKHKAAIGRLTEMLDKYPECPDKDQVYYYLGRTFLDSGHPNLAVATFENLIADFPRSPL 233
Query: 263 ARYVETLVK 271
A +T+++
Sbjct: 234 AAEAKTILR 242
>gi|28868054|ref|NP_790673.1| competence lipoprotein ComL [Pseudomonas syringae pv. tomato str.
DC3000]
gi|28851290|gb|AAO54368.1| competence lipoprotein ComL, putative [Pseudomonas syringae pv.
tomato str. DC3000]
Length = 338
Score = 86.0 bits (210), Expect = 6e-15, Method: Composition-based stats.
Identities = 58/232 (25%), Positives = 102/232 (43%), Gaps = 17/232 (7%)
Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
+ + + + + E+Y++A L +++ A E +PF A ++
Sbjct: 16 CSSK-------EVIDENLSEVELYQQAQADLGNNSYNSATEKLKALESRYPFGRYADQAQ 68
Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------RD 147
L + Y G+ + A S E +I +P+ NVDY YY+ G++
Sbjct: 69 LELIYSNYKNGEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDVGLLARFLPLDQ 128
Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
D A + +++ RY NS Y A+ + RN LA+ E+ + YYL R YV
Sbjct: 129 TKRDPGAARDSFNEFAQLTSRYPNSRYSPDAKQRMIYLRNLLASYEIHVADYYLTRQAYV 188
Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
AA R + V+ N+ + + +A +VE+Y L L D A + +++ YP
Sbjct: 189 AAANRGRYVVENFQETPSVGDGLAVMVESYQRLHLDDLAATSLEVLKTNYPN 240
>gi|54310132|ref|YP_131152.1| hypothetical protein PBPRA3022 [Photobacterium profundum SS9]
gi|46914571|emb|CAG21350.1| conserved hypothetical protein [Photobacterium profundum SS9]
Length = 242
Score = 85.6 bits (209), Expect = 6e-15, Method: Composition-based stats.
Identities = 51/246 (20%), Positives = 94/246 (38%), Gaps = 17/246 (6%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
LTI +AV L G + V E+Y A L+ +++ A E
Sbjct: 1 MKRLTITTLLAVAILSGCSST-------EEVVPDVPPAELYVTAQQALQSGSWTTAIERL 53
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
+PF + + L + Y + + P + D+V Y+ G++
Sbjct: 54 ETLDSRYPFGAYSEQVQLDLIYAYYKNDDLALGEATIARFNRLNPAHEKSDWVLYMRGLT 113
Query: 141 YAQMIRDVPYD----------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
R +D + + R+++RY NS Y A+ + +N+LA
Sbjct: 114 QMAQDRSFMHDIFSIDRHDRDPEPARKAFRDFKRLLDRYPNSQYAADAKARMIFIKNRLA 173
Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
++ +Y++R ++AAI R Q + Y D + A +++ ++ AY L L +
Sbjct: 174 DYDLATVDFYIRREAWIAAINRSQQIQKLYPDTQAARKSLPLMLTAYEKLGLQEPIENTK 233
Query: 251 SLIQER 256
LI
Sbjct: 234 KLIALN 239
>gi|66043990|ref|YP_233831.1| competence lipoprotein ComL, putative [Pseudomonas syringae pv.
syringae B728a]
gi|63254697|gb|AAY35793.1| competence lipoprotein ComL, putative [Pseudomonas syringae pv.
syringae B728a]
gi|330954254|gb|EGH54514.1| competence lipoprotein ComL, putative [Pseudomonas syringae Cit 7]
Length = 340
Score = 85.6 bits (209), Expect = 6e-15, Method: Composition-based stats.
Identities = 57/232 (24%), Positives = 102/232 (43%), Gaps = 17/232 (7%)
Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
+ + + + + E+Y++A L +++ A E +PF A ++
Sbjct: 18 CSSK-------EVIDENLSEVELYQQAQADLGNNSYNSATEKLKALESRYPFGRYADQAQ 70
Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------RD 147
L + Y G+ + A S E +I +P+ NVDY YY+ G++
Sbjct: 71 LELIYSNYKNGEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDVGLLARFLPLDQ 130
Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
D A + +++ R+ NS Y A+ + RN LA+ E+ + YYL R YV
Sbjct: 131 TKRDPGAARDSFNEFAQLTSRFPNSRYAPDAKQRMIYLRNLLASYEIHVADYYLTRQAYV 190
Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
AA R + V+ N+ + + +A +VE+Y L L D A + +++ YP
Sbjct: 191 AAANRGRYVVENFQETPSVGDGLAVMVESYQRLHLDDLAATSLEVLKTNYPN 242
>gi|253699141|ref|YP_003020330.1| outer membrane assembly lipoprotein YfiO [Geobacter sp. M21]
gi|251773991|gb|ACT16572.1| outer membrane assembly lipoprotein YfiO [Geobacter sp. M21]
Length = 256
Score = 85.6 bits (209), Expect = 6e-15, Method: Composition-based stats.
Identities = 41/254 (16%), Positives = 94/254 (37%), Gaps = 9/254 (3%)
Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
+ + +C + T ++ +++ +N+++A
Sbjct: 1 MQLRPLRHLALCSVLCLISACAST---------PTPIKSADAYFKEGEAAYASRNYAEAI 51
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
E + + + ++ L A + Y +AA+ E++ +P Y Y +
Sbjct: 52 ESWKKVKESDTSPELTSQAELKIADAHFENKAYIEAAAAYEDFRKLHPTHPQAPYALYRL 111
Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
+S+ Q I DQ K + + + +Y S Y + R++ A E +G
Sbjct: 112 ALSHYQQIAGTDTDQTPVKNAVATLEAFLGQYPRSEYAPELSKKLADCRDKQLAYENYVG 171
Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
+YL+ +Y +AI R L + ++ + L +AY+ + + + V+ + +
Sbjct: 172 NFYLRSEKYQSAIKRLNEALVRFPGLTRLDDTLFYLGKAYLKAGELQQGKVVLQRLAAEH 231
Query: 258 PQGYWARYVETLVK 271
P R L++
Sbjct: 232 PASPRNREAAALLQ 245
>gi|167855785|ref|ZP_02478538.1| putative lipoprotein [Haemophilus parasuis 29755]
gi|219871127|ref|YP_002475502.1| DNA uptake lipoprotein, TPR repeat-containing protein [Haemophilus
parasuis SH0165]
gi|167853064|gb|EDS24325.1| putative lipoprotein [Haemophilus parasuis 29755]
gi|219691331|gb|ACL32554.1| DNA uptake lipoprotein, TPR repeat-containing protein [Haemophilus
parasuis SH0165]
Length = 259
Score = 85.6 bits (209), Expect = 6e-15, Method: Composition-based stats.
Identities = 56/248 (22%), Positives = 111/248 (44%), Gaps = 16/248 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ KF +A +VG + + +E+Y+K +L++ +++ A
Sbjct: 1 MRKFYSLASLVLAGLLVVGCSGSKKDEF------EGIPSQELYDKGQAYLQDGDYNNAIR 54
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
Y + + L + Y G+Y +A + E + +P S ++DYVYYL G
Sbjct: 55 YLDAVDLRSNQGAYDEQVQLSLIYANYKLGEYYKALEVAERFARTHPNSSSMDYVYYLAG 114
Query: 139 MSYAQMIRDVPYDQR----------ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
++YA++ + D + I +Y NS Y A+ ++ +N+
Sbjct: 115 LNYARLGDNWIQDFFGINRASRAIENIRNAYGNFQTITFQYPNSQYTSDAQNWMIYLKNR 174
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
LA E++I +Y++R YVA + R +L Y D + +A+ L ++ A+ + D A++
Sbjct: 175 LAEHELKIAEFYMERKAYVAVVNRVDEMLRLYPDTQATYQALPLLKTSFEAMGIKDSAQK 234
Query: 249 VVSLIQER 256
+ +I+E
Sbjct: 235 ISEMIKEN 242
>gi|269101903|ref|ZP_06154600.1| probable component of the lipoprotein assembly complex (forms a
complex with YaeT YfgL and NlpB) [Photobacterium
damselae subsp. damselae CIP 102761]
gi|268161801|gb|EEZ40297.1| probable component of the lipoprotein assembly complex (forms a
complex with YaeT YfgL and NlpB) [Photobacterium
damselae subsp. damselae CIP 102761]
Length = 242
Score = 85.6 bits (209), Expect = 7e-15, Method: Composition-based stats.
Identities = 52/246 (21%), Positives = 98/246 (39%), Gaps = 17/246 (6%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
LT+ +AV L G + V E+Y A L+ N+S+A E
Sbjct: 1 MKRLTLTTLLAVAILSGCSST-------EEVVPDVPPSELYATAQESLQSGNWSQAIERL 53
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
+PF + + L + Y + + ++ P + D+V Y++G++
Sbjct: 54 ETLDSRYPFGAYSDQVQLDLIYAYYKNDDLAMSEATINRFMRLNPINPKSDWVLYMLGLT 113
Query: 141 YAQMIRDVPYDQRAT----------KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
+ R +D + + +++RY NS Y A+ + +N+LA
Sbjct: 114 HMAQDRSFMHDLFNVDRSDRDPTAARQAFRDFQVLLQRYPNSEYSADAKARMVFLKNRLA 173
Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
++ + +Y++RG ++AAI R + V Y D E A +++ +AY L + E
Sbjct: 174 NYDLAVADFYIRRGAWIAAINRCEQVQRLYDDTEAARKSLLLEKKAYEKLGMQKEVERTQ 233
Query: 251 SLIQER 256
I
Sbjct: 234 KSIDLN 239
>gi|296157779|ref|ZP_06840613.1| outer membrane assembly lipoprotein YfiO [Burkholderia sp. Ch1-1]
gi|295892025|gb|EFG71809.1| outer membrane assembly lipoprotein YfiO [Burkholderia sp. Ch1-1]
Length = 286
Score = 85.6 bits (209), Expect = 7e-15, Method: Composition-based stats.
Identities = 54/226 (23%), Positives = 93/226 (41%), Gaps = 10/226 (4%)
Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106
T ++Y +A L +F K +YF PF A+++ + A+ +
Sbjct: 45 EKTDETATWNNNKLYTEANDALTGGDFGKCAKYFEMLEGRDPFGHFAQQAQINVAYCNWK 104
Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATK 156
+ A + +I +P+ ++ Y YYL GM + D ++ +
Sbjct: 105 DNENAAADQAIDRFIQLHPDHPDIAYAYYLKGMIHFNDDLGLFGRFSGQDMSERDPKSLR 164
Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
+V++Y NS Y A + N LA+ EV YY +RG YVAAI R QL
Sbjct: 165 ESYDAFKIVVDKYPNSKYAPDAAQRMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLA 224
Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
L Y +A E+A+ ++ +Y L A + ++ +P +
Sbjct: 225 LTQYKNAPAIEDALHIMMLSYQRLNQPQLADDTKRVLAGTFPDSPY 270
>gi|91783469|ref|YP_558675.1| putative competence lipoprotein, ComL [Burkholderia xenovorans
LB400]
gi|91687423|gb|ABE30623.1| Putative competence lipoprotein, ComL [Burkholderia xenovorans
LB400]
Length = 286
Score = 85.6 bits (209), Expect = 7e-15, Method: Composition-based stats.
Identities = 54/226 (23%), Positives = 93/226 (41%), Gaps = 10/226 (4%)
Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106
T ++Y +A L +F K +YF PF A+++ + A+ +
Sbjct: 45 EKTDETATWNNNKLYTEANDALTGGDFGKCAKYFEMLEGRDPFGHFAQQAQINVAYCNWK 104
Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATK 156
+ A + +I +P+ ++ Y YYL GM + D ++ +
Sbjct: 105 DNENAAADQAIDRFIQLHPDHPDIAYAYYLKGMIHFNDDLGLFGRFSGQDMSERDPKSLR 164
Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
+V++Y NS Y A + N LA+ EV YY +RG YVAAI R QL
Sbjct: 165 ESYDAFKIVVDKYPNSKYAPDAAQRMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLA 224
Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
L Y +A E+A+ ++ +Y L A + ++ +P +
Sbjct: 225 LTQYKNAPAIEDALHIMMLSYQRLNQPQLADDTKRVLAGTFPDSPY 270
>gi|86148439|ref|ZP_01066730.1| DNA uptake lipoprotein [Vibrio sp. MED222]
gi|218708593|ref|YP_002416214.1| hypothetical lipoprotein [Vibrio splendidus LGP32]
gi|85833793|gb|EAQ51960.1| DNA uptake lipoprotein [Vibrio sp. MED222]
gi|218321612|emb|CAV17564.1| Hypothetical lipoprotein [Vibrio splendidus LGP32]
Length = 242
Score = 85.2 bits (208), Expect = 8e-15, Method: Composition-based stats.
Identities = 52/246 (21%), Positives = 95/246 (38%), Gaps = 17/246 (6%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
LT+ +AV LVG + + +Y A L+ ++ A E
Sbjct: 1 MKHLTLTGLLAVSLLVGCSSS-------EEIVPDVPPSVLYSDAQESLQSGSWLSAIEKL 53
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
+PF + + L + Y + ++ P + D+V Y+ G++
Sbjct: 54 EALDSRYPFGAYSEQVQLDLIYAYYKNDDLALGLATISRFLRLNPTHEKQDWVLYMRGLT 113
Query: 141 YAQMIRDVPYDQRATKL----------MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
+ R+ +D R++ER+ SPY + A+ + +N+LA
Sbjct: 114 HMAQDRNFMHDIFNIDRSDRDPEPVKLAFADFKRLLERFPASPYAEDAQKRMFALKNRLA 173
Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
++ +YL+R ++AAI R Q + Y D A +++ +EAY L L D
Sbjct: 174 EYDLATADFYLRREAWIAAINRTQELQKTYPDTIAARKSLDIQLEAYEQLGLEDAVLRTE 233
Query: 251 SLIQER 256
LI+
Sbjct: 234 KLIELN 239
>gi|319778231|ref|YP_004129144.1| component of the lipoprotein assembly complex protein [Taylorella
equigenitalis MCE9]
gi|317108255|gb|ADU91001.1| component of the lipoprotein assembly complex protein [Taylorella
equigenitalis MCE9]
Length = 256
Score = 85.2 bits (208), Expect = 8e-15, Method: Composition-based stats.
Identities = 49/238 (20%), Positives = 103/238 (43%), Gaps = 14/238 (5%)
Query: 35 LVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR 94
+ T ++Y+ A +++ +++ A +Y P++ A+
Sbjct: 1 MSACGIFDREI----DETAGLPADKLYDTARTYVRGRDWDSARKYLAAIENRHPYSSYAQ 56
Query: 95 KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY----------LVGMSYAQM 144
++++ A+V + + ++A ++ + ++ YP +Y+ Y ++
Sbjct: 57 QAMIDEAYVNWKDEQPERAIAVIDRFLQIYPSHPGTEYMLYLKGLITFTPPTHFLTSFAG 116
Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204
+ D R + +++ Y NS Y AR + LA E + +YY ++
Sbjct: 117 QKPSERDPRGLRQSYTAFKVLIDNYPNSRYAADARQRLVWLVTTLAEHEANVAKYYYEKK 176
Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
YVAAI R Q+VL +S AE A+ L+++Y AL D+A + S++ + YP +
Sbjct: 177 AYVAAINRAQVVLTEFSGVPSAELALYVLMKSYEALGSEDQAADAKSVLVKNYPNSRY 234
>gi|194323821|ref|ZP_03057597.1| tetratricopeptide repeat domain protein [Francisella tularensis
subsp. novicida FTE]
gi|208779912|ref|ZP_03247256.1| tetratricopeptide repeat domain protein [Francisella novicida FTG]
gi|194322185|gb|EDX19667.1| tetratricopeptide repeat domain protein [Francisella tularensis
subsp. novicida FTE]
gi|208744367|gb|EDZ90667.1| tetratricopeptide repeat domain protein [Francisella novicida FTG]
Length = 262
Score = 85.2 bits (208), Expect = 8e-15, Method: Composition-based stats.
Identities = 55/243 (22%), Positives = 101/243 (41%), Gaps = 12/243 (4%)
Query: 32 VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91
+ L +D L V +Y KA ++ Q + A + +PF
Sbjct: 2 LLLLSSCG--PKKDSELPQVYTGYTASFIYAKAHEQMQNQKYFDAIRSYKSLVAQYPFTP 59
Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV----------GMSY 141
+A K ++ +V Y + A +LG+++I YP S YVYY++ +
Sbjct: 60 LAEKGMVDLIYVYYMDDESTMALALGQQFIKMYPYSIYKGYVYYMIGVVGFEDGRGMLQT 119
Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
+D + + ++ N +V A+ + N +A +I +Y
Sbjct: 120 YAPYDMNYHDPTGYQDAYTNFEKAIQLDPNGSFVPDAKRRMVFINNIIARHYDDIAHFYF 179
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
KRG Y AAI R V+ NY + E+A+ + AY L L D+A+ + ++++ YP+
Sbjct: 180 KRGAYNAAIDRASQVIRNYPQSTSTEDALVLTIRAYNKLGLYDQAKANIRVLKKNYPKNK 239
Query: 262 WAR 264
+ +
Sbjct: 240 FIK 242
>gi|77461058|ref|YP_350565.1| competence lipoprotein ComL, putative [Pseudomonas fluorescens
Pf0-1]
gi|77385061|gb|ABA76574.1| putative lipoprotein [Pseudomonas fluorescens Pf0-1]
Length = 338
Score = 85.2 bits (208), Expect = 8e-15, Method: Composition-based stats.
Identities = 58/232 (25%), Positives = 98/232 (42%), Gaps = 17/232 (7%)
Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
+ + V + + E+Y++A L +++ A +PF A ++
Sbjct: 18 CSSK-------EVVDENLSEAELYQQAQQDLDNNSYTSATAKLKALESRYPFGRYADQAQ 70
Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------RD 147
L + Y + + A S E +I +P+ NVDY YYL G++
Sbjct: 71 LELIYANYKNAEPEAAKSAAERFIRLHPQHPNVDYAYYLKGLTSFDQDVGLLARFLPLDM 130
Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
D A + +++ RY NS Y A+ + RN LAA E+ + YYL R YV
Sbjct: 131 TKRDPGAARDSYNEFAQLTSRYPNSRYAPDAKQRMIYLRNLLAAYEIHVADYYLTRQAYV 190
Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
AA R + V+ N+ + + +A + EAY L L + A + ++ YP
Sbjct: 191 AAANRGRYVVENFQETPSVGDGLAVMTEAYQRLHLDELAATSLETLKLNYPN 242
>gi|331004933|ref|ZP_08328346.1| putative component of the lipoprotein assembly complex [gamma
proteobacterium IMCC1989]
gi|330421257|gb|EGG95510.1| putative component of the lipoprotein assembly complex [gamma
proteobacterium IMCC1989]
Length = 306
Score = 85.2 bits (208), Expect = 8e-15, Method: Composition-based stats.
Identities = 55/256 (21%), Positives = 106/256 (41%), Gaps = 16/256 (6%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
K L + F+ G S+T+ + E+YE+ LK NF A +Y
Sbjct: 13 KRHLFFILVVLSVFIGGCTANQ------LSLTNFGTEAELYEQVQKDLKRDNFLDAIKYL 66
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
+ FPF ++ + L + Y + + A + +I +P+ +NVDY YY+ G+
Sbjct: 67 QLMEKKFPFGEYSKSAQLSLIYAHYGFDQKESATASANRFIRLHPQHRNVDYAYYMKGLI 126
Query: 141 YAQMIRDVPYDQRAT----------KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
+ + + S +V+ + S Y A +T N LA
Sbjct: 127 SFPDAKTFLQQFFNVDLSKRDISAARSSFNHFSTLVKLFPESEYAPDALKRMTFLHNLLA 186
Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
E+ + YYL+R ++AA R + V+ N+ + +A+A +++ Y + + D A +
Sbjct: 187 RHEIHVANYYLERKAFLAAANRGRYVVENFQETSAIPDALAVMIQGYHEMKMHDLAENSL 246
Query: 251 SLIQERYPQGYWARYV 266
+++ +P +
Sbjct: 247 EVLRTNFPNHPALKAS 262
>gi|254230256|ref|ZP_04923647.1| hypothetical protein VEx25_0358 [Vibrio sp. Ex25]
gi|262395164|ref|YP_003287018.1| putative component of the lipoprotein assembly complex [Vibrio sp.
Ex25]
gi|151937236|gb|EDN56103.1| hypothetical protein VEx25_0358 [Vibrio sp. Ex25]
gi|262338758|gb|ACY52553.1| probable component of the lipoprotein assembly complex (forms a
complex with YaeT YfgL and NlpB) [Vibrio sp. Ex25]
Length = 242
Score = 85.2 bits (208), Expect = 8e-15, Method: Composition-based stats.
Identities = 53/238 (22%), Positives = 98/238 (41%), Gaps = 17/238 (7%)
Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
+AV L G + + + E+Y A + L+ N+ A E +P
Sbjct: 9 LLAVSLLFGCASK-------EEIVPDVPPSELYADAQISLQSGNWLSAIEKLEALDSRYP 61
Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
F + + L + Y + ++ P + +D+V Y+ G+S+ R+
Sbjct: 62 FGAYSEQVQLDLIYAYYKNDDLALGLATISRFMRLNPTHEKMDWVLYMRGLSHMAQDRNF 121
Query: 149 PYD----------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
+D K ++++RY NSPY + ++ + +N+LA ++
Sbjct: 122 MHDLFSVDRSDRDPEPVKKAFDDFKKLLQRYPNSPYAEDSQKRMVALKNRLANYDLATAD 181
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
+YL+R +VAAI R Q + + D E A +++ +EAY L L D LI+
Sbjct: 182 FYLRREAWVAAINRSQELQKAFPDTEAARKSLTIQLEAYKQLGLEDAVARTEKLIELN 239
>gi|30248521|ref|NP_840591.1| TPR repeat-containing protein [Nitrosomonas europaea ATCC 19718]
gi|30138407|emb|CAD84417.1| TPR repeat [Nitrosomonas europaea ATCC 19718]
Length = 255
Score = 85.2 bits (208), Expect = 9e-15, Method: Composition-based stats.
Identities = 59/246 (23%), Positives = 103/246 (41%), Gaps = 18/246 (7%)
Query: 35 LVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR 94
L S + V + Y +A L E N++ A + F +P+ A+
Sbjct: 2 LAACGILSEKTVDHSK----WSASKFYVEAKNELNEGNYAAAVKLFEALEARYPYGRYAQ 57
Query: 95 KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL--------------VGMS 140
++ L A+ Y ++ A + E +I YP +N+DY YY+
Sbjct: 58 QAQLEIAYAYYKDQEHASAIAAAERFIQLYPHHQNIDYAYYIKGLASFNDDQGLMGYITH 117
Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
D +A++ + + ++V RY +S Y A + N LA E+ + +YY
Sbjct: 118 KIIKQDMSERDAKASRESFESLKQLVTRYPDSKYTPDALQRMAYLVNALARGEIHVAQYY 177
Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
+KR YVAAI R Q +L Y E+A+ + AY L + D +V +I++ +P+
Sbjct: 178 MKRKAYVAAIKRAQFILEEYPQTPATEDALYIMAVAYGELGMTDLREDVEKVIRKNFPES 237
Query: 261 YWARYV 266
+
Sbjct: 238 IYLTDS 243
>gi|315634973|ref|ZP_07890254.1| DNA uptake lipoprotein [Aggregatibacter segnis ATCC 33393]
gi|315476235|gb|EFU66986.1| DNA uptake lipoprotein [Aggregatibacter segnis ATCC 33393]
Length = 261
Score = 85.2 bits (208), Expect = 9e-15, Method: Composition-based stats.
Identities = 46/248 (18%), Positives = 91/248 (36%), Gaps = 17/248 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K + + + ++ +Y +L++ ++S+A
Sbjct: 1 MRKLKSFALLTAMALAVTACSSSKQD-------VEQAPEQTLYSTGQTYLQDGDYSQAIR 53
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL-- 136
Y N S FP + + + L + Y Y + + +I ++P S ++DY Y+
Sbjct: 54 YLNAVSSRFPGSSYSEQVQLNLIYAYYKTQDYSETLVTIDRFIQRFPNSSHLDYALYMAG 113
Query: 137 --------VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
+ + + K +V+ + NSPY A +T +
Sbjct: 114 LTNSALGDNFFQDFFGVDRATRENTSIKTAFANFQNLVQHFPNSPYTPDALARMTYIKAS 173
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
LA E+ I ++Y KR YVA R +L Y D + +A+ + +Y + L A +
Sbjct: 174 LARHELAIAKFYFKRDAYVATANRVVSMLKLYPDTQATLDALPLMKASYEKMNLTHLADQ 233
Query: 249 VVSLIQER 256
+I
Sbjct: 234 TAKIIAAN 241
>gi|302879314|ref|YP_003847878.1| outer membrane assembly lipoprotein YfiO [Gallionella
capsiferriformans ES-2]
gi|302582103|gb|ADL56114.1| outer membrane assembly lipoprotein YfiO [Gallionella
capsiferriformans ES-2]
Length = 264
Score = 85.2 bits (208), Expect = 9e-15, Method: Composition-based stats.
Identities = 52/247 (21%), Positives = 107/247 (43%), Gaps = 12/247 (4%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
+ +L +F + + + D + E+Y +A L + +++ A +
Sbjct: 1 MRHSLAVFLLLTLTACGILSPLPTGDTA--DTSKSLSAEELYRQAKTELDDGSYNTAIKL 58
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
+ +P+ A++S+L A+ Y + A + + +I Q+P + +VDY YY+ G+
Sbjct: 59 YETLQSRYPYGKYAQQSMLEMAYAYYRQSEPDPAIATADRFIKQFPNNAHVDYAYYVKGL 118
Query: 140 SYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
+ D +A +V R+ NS Y A+ + N L
Sbjct: 119 ATFNGELSLLSSVAGQDPSERDPQAALESFNAFKALVVRFPNSKYTPDAKLRLQYLVNAL 178
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
+ E+ + +YYL+RG Y+AA+ R Q ++ Y ++ EA+ +++AY AL ++ +
Sbjct: 179 SRHEIHVAQYYLRRGAYIAAVNRAQDIIKQYPNSPSTREALQIMIDAYDALGMVQLRDDT 238
Query: 250 VSLIQER 256
+
Sbjct: 239 KRVQASN 245
Score = 39.4 bits (89), Expect = 0.48, Method: Composition-based stats.
Identities = 15/85 (17%), Positives = 33/85 (38%)
Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242
++ A + + L G Y AI ++ + + Y ++A+++M + AY +
Sbjct: 29 DTSKSLSAEELYRQAKTELDDGSYNTAIKLYETLQSRYPYGKYAQQSMLEMAYAYYRQSE 88
Query: 243 MDEAREVVSLIQERYPQGYWARYVE 267
D A +++P Y
Sbjct: 89 PDPAIATADRFIKQFPNNAHVDYAY 113
>gi|170692347|ref|ZP_02883510.1| putative competence lipoprotein, ComL [Burkholderia graminis C4D1M]
gi|170142777|gb|EDT10942.1| putative competence lipoprotein, ComL [Burkholderia graminis C4D1M]
Length = 286
Score = 85.2 bits (208), Expect = 9e-15, Method: Composition-based stats.
Identities = 55/226 (24%), Positives = 93/226 (41%), Gaps = 10/226 (4%)
Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106
T ++Y +A L +F K +YF PF A+++ + A+ +
Sbjct: 45 EKTDETATWNNNKLYTEANDALSGGDFGKCAKYFEMLEGRDPFGHFAQQAQINVAYCNWK 104
Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATK 156
+ A + +I +P+ ++ Y YYL GM + D ++ +
Sbjct: 105 DNEAAAADQAIDRFIQLHPDHPDIAYAYYLKGMIHFNDDLGLFGRFSGQDMSERDPKSLR 164
Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
+V+RY NS Y A + N LA+ EV YY +RG YVAAI R QL
Sbjct: 165 ESYDAFKVVVDRYPNSKYAPDAAQRMRYIVNALASHEVHAADYYYRRGAYVAAINRAQLA 224
Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
L Y +A E+A+ ++ +Y L A + ++ +P +
Sbjct: 225 LKEYKNAPAIEDALHIMMLSYQRLNQPQLADDTKRVLAGTFPDSPY 270
>gi|304309990|ref|YP_003809588.1| competence lipoprotein ComL [gamma proteobacterium HdN1]
gi|301795723|emb|CBL43922.1| competence lipoprotein ComL [gamma proteobacterium HdN1]
Length = 272
Score = 85.2 bits (208), Expect = 9e-15, Method: Composition-based stats.
Identities = 56/219 (25%), Positives = 94/219 (42%), Gaps = 10/219 (4%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
V + +R+ YE A LK++ FS+A E + +PF A ++ L + Y +
Sbjct: 21 KVENELSERQYYEDAQKALKDEQFSRAVERLEALNARYPFGRYAEQAQLDLVYAYYRSMD 80
Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLV----------GMSYAQMIRDVPYDQRATKLML 159
Y + E +I +P+ +DY YY+ D K
Sbjct: 81 YASSGVTAERFIRMHPDHTELDYAYYMKGLSTYSVDRGIFERFIPSDYSERDLEPAKESF 140
Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219
SR++ R+ NS Y AR + RN A E++ + ++RG YVA+ R + V+ N
Sbjct: 141 NDFSRLLNRFPNSIYAPDARKRMVYLRNLFAEHELKAAHWNMRRGAYVASANRARYVVEN 200
Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
+ E +A L ++Y L L D A + + ++ YP
Sbjct: 201 FDRTPAMAEGLAILYKSYRELGLNDLANDTLKVLVSNYP 239
>gi|322514977|ref|ZP_08067989.1| DNA uptake lipoprotein [Actinobacillus ureae ATCC 25976]
gi|322119030|gb|EFX91194.1| DNA uptake lipoprotein [Actinobacillus ureae ATCC 25976]
Length = 260
Score = 84.8 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 50/249 (20%), Positives = 110/249 (44%), Gaps = 17/249 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ KF + +VG +++++ + +++Y K +L++ +++ A
Sbjct: 1 MRKFTSLASLMLVGLLVVGCSNSANKEL------EESSAQDLYTKGQTYLQDGDYNSAIR 54
Query: 79 YFNQC-SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY-- 135
Y + ++ + ++ L + Y G+Y +A E ++ YP S ++DYVYY
Sbjct: 55 YLDAVGTKGGQQSAFGEQTQLSLIYANYKVGEYYKALDAAERFVRAYPNSASMDYVYYLA 114
Query: 136 --------LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
+ + + + IV+ Y S Y + A+ ++ N
Sbjct: 115 GLSNARLGDNFIQDFFGVNRASRALDSVRNAYGSFQTIVQHYPQSKYAQDAKNWMGYLIN 174
Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
++A E+ I ++Y R YVA + R + ++ Y +++ EA+A + +AY + + D A
Sbjct: 175 RMAEHELAIVKFYDDREAYVAVVNRVEEMMRFYPESKPTYEALAYMQKAYEQIGIKDSAE 234
Query: 248 EVVSLIQER 256
+V +LI+
Sbjct: 235 KVAALIEAN 243
>gi|269966584|ref|ZP_06180665.1| putative lipoprotein [Vibrio alginolyticus 40B]
gi|269828769|gb|EEZ83022.1| putative lipoprotein [Vibrio alginolyticus 40B]
Length = 242
Score = 84.8 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 53/238 (22%), Positives = 98/238 (41%), Gaps = 17/238 (7%)
Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
+AV L G + + + E+Y A + L+ N+ A E +P
Sbjct: 9 LLAVSLLFGCASK-------EEIVPDVPPSELYADAQISLQSGNWLSAIEKLEALDSRYP 61
Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
F + + L + Y + ++ P + +D+V Y+ G+S+ R+
Sbjct: 62 FGAYSEQVQLDLIYAYYKNDDLALGLATISRFMRLNPTHEKMDWVLYMRGLSHMAQDRNF 121
Query: 149 PYD----------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
+D K ++++RY NSPY + ++ + +N+LA ++
Sbjct: 122 MHDLFSVDRSDRDPEPVKKAFDDFKKLLQRYPNSPYAQDSQKRMVALKNRLANYDLATAD 181
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
+YL+R +VAAI R Q + + D E A +++ +EAY L L D LI+
Sbjct: 182 FYLRREAWVAAINRSQELQKAFPDTEAARKSLTIQLEAYKQLGLEDAVARTEKLIELN 239
>gi|323951204|gb|EGB47080.1| outer membrane assembly lipoprotein YfiO [Escherichia coli H252]
Length = 249
Score = 84.8 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 48/243 (19%), Positives = 93/243 (38%), Gaps = 17/243 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + + + FL G E+Y A L++ N+ +A
Sbjct: 1 MTRMKYLVAAATLSLFLAGCSGSKEE-------VPDNPPNEIYATAQQKLQDGNWRQAIT 53
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+PF +++ L + Y A + + +I P N+DYV Y+ G
Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRG 113
Query: 139 MSYAQMIR----------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
++ + D + + S++V Y NS Y A + +++
Sbjct: 114 LTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDR 173
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
LA E + YY +RG +VA + R + +L +Y D + +A+ + AY + + +A +
Sbjct: 174 LAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQMNAQAEK 233
Query: 249 VVS 251
V
Sbjct: 234 VSE 236
>gi|330999931|ref|ZP_08323629.1| outer membrane assembly lipoprotein YfiO [Parasutterella
excrementihominis YIT 11859]
gi|329573338|gb|EGG54950.1| outer membrane assembly lipoprotein YfiO [Parasutterella
excrementihominis YIT 11859]
Length = 254
Score = 84.5 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 49/219 (22%), Positives = 99/219 (45%), Gaps = 10/219 (4%)
Query: 48 LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107
++ T+ ++Y +A L E N+ A +Y+ + +P+ ++++ + +A+ +
Sbjct: 5 VEDPTEGWTADKLYVEARDNLNEGNYETARDYYQKLEARYPYGRYSQQAQVETAYSYFKE 64
Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT----------KL 157
G+ QQA ++ + ++ QYPE Y Y+ G++ +
Sbjct: 65 GEPQQAIAVCDRFLRQYPEHPLSPYALYIKGIATLDEDEGWMSYLTRQDLSKRDAQAARD 124
Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
+V R+ NS Y + AR + A E+ +YY R Y+AAI R + VL
Sbjct: 125 AFDIFKELVLRFPNSRYARDARERMHELVEAQAKYEINTAKYYYVRDAYIAAINRAENVL 184
Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
N+ + AEEA+ + ++Y L + D+A ++ ++
Sbjct: 185 LNFQTSPQAEEALIIMRDSYNKLGMDDKAADIQRILDAN 223
>gi|90580376|ref|ZP_01236183.1| hypothetical protein VAS14_20631 [Vibrio angustum S14]
gi|90438678|gb|EAS63862.1| hypothetical protein VAS14_20631 [Vibrio angustum S14]
Length = 242
Score = 84.5 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 53/246 (21%), Positives = 98/246 (39%), Gaps = 17/246 (6%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
LTI +AV L G + + V +Y A L++ N++ A E
Sbjct: 1 MKRLTITTLLAVALLSGCSSK-------EEVIPDVPPSNLYATAQTALQKGNWTSAIEQL 53
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
+PF + + L + Y + + E ++ P++ D+V Y+ G++
Sbjct: 54 EALDSRYPFGAYSDQVQLDLIYAYYKSDDLALGEATIERFLRLNPDNPQADWVVYMRGLT 113
Query: 141 YAQMIRDVPYDQRAT----------KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
+ R +D + + ++ERY S Y A+ + +N+LA
Sbjct: 114 HMAQDRSFMHDMFNINRFDRDPTPSRQAFKDFKYLLERYPESEYGADAKARMIFLKNRLA 173
Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
++ +Y++R ++AAI R Q + Y D E A +++A AY L L E
Sbjct: 174 NYDLSTADFYIRREAWIAAINRCQQIQRLYPDTEAARQSLALEKTAYEKLNLQKEVERTD 233
Query: 251 SLIQER 256
L++
Sbjct: 234 KLMKLN 239
>gi|257481619|ref|ZP_05635660.1| competence lipoprotein ComL [Pseudomonas syringae pv. tabaci ATCC
11528]
Length = 266
Score = 84.5 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 57/232 (24%), Positives = 102/232 (43%), Gaps = 17/232 (7%)
Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
+ + + + + E+Y++A L +++ A E +PF A ++
Sbjct: 18 CSSK-------EVIDENLSEVELYQQAQADLGNNSYNSATEKLKALESRYPFGRYADQAQ 70
Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------RD 147
L + Y G+ + A S E +I +P+ NVDY YY+ G++
Sbjct: 71 LELIYSNYKNGEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDVGLLARFLPLDQ 130
Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
D A + +++ R+ NS Y A+ + RN LA+ E+ + YYL R YV
Sbjct: 131 TKRDPGAARDSFNEFAQLTSRFPNSRYSPDAKQRMIYLRNLLASYEIHVADYYLTRQAYV 190
Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
AA R + V+ N+ + + +A +VE+Y L L D A + +++ YP
Sbjct: 191 AAANRGRYVVENFQETPSVGDGLAVMVESYQRLHLDDLAATSLEVLKTNYPN 242
>gi|148978561|ref|ZP_01815013.1| putative lipoprotein [Vibrionales bacterium SWAT-3]
gi|145962350|gb|EDK27631.1| putative lipoprotein [Vibrionales bacterium SWAT-3]
Length = 242
Score = 84.5 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 51/246 (20%), Positives = 97/246 (39%), Gaps = 17/246 (6%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
LT+ +AV L G + + +Y +A L+ ++ A E
Sbjct: 1 MKHLTLAGLLAVSLLAGCSST-------EEIVPDVPPSVLYSEAQESLQSGSWLSAIEKL 53
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
+PF + + L + Y + ++ P + D+V Y+ G++
Sbjct: 54 EALDSRYPFGAYSEQVQLDLIYAYYKNDDLALGLATISRFLRLNPTHEKQDWVLYMRGLT 113
Query: 141 YAQMIRDVPYDQRATKL----------MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
+ R+ +D R++ER+ SPY + A+ + +N+LA
Sbjct: 114 HMAQDRNFMHDIFNIDRSDRDPEPVKLAFADFKRLLERFPASPYAEDAQKRMFALKNRLA 173
Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
++ +YL+R ++AAI R Q + Y D A +++ +EAY L L D +
Sbjct: 174 DYDLATADFYLRREAWIAAINRTQELQKTYPDTIAARKSLKIQLEAYKQLGLEDAIQRTE 233
Query: 251 SLIQER 256
+LI+
Sbjct: 234 ALIELN 239
>gi|160898939|ref|YP_001564521.1| putative transmembrane protein [Delftia acidovorans SPH-1]
gi|160364523|gb|ABX36136.1| putative transmembrane protein [Delftia acidovorans SPH-1]
Length = 263
Score = 84.5 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 60/250 (24%), Positives = 94/250 (37%), Gaps = 17/250 (6%)
Query: 19 LYKFALTIF-FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
+ + L+I + L T +Y +A F KA
Sbjct: 1 MQRIPLSIVPAMLVAGVLTACSSTQQD------PTAKWTPDRIYTEARDEAASGAFDKAV 54
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY----- 132
F + +A+++ L A+ QY +G QA + + ++ +P S DY
Sbjct: 55 PLFEKLEGRAAGTPLAQQAQLDKAYAQYKSGDKIQATATLDRFLKLHPASPATDYALYLK 114
Query: 133 -----VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
L S+ DQ+A K + +V R+ S Y + +R + N
Sbjct: 115 GLVNFNDNLGMFSWLSRQDLSERDQKAAKDSFESFRELVTRFPESRYAEDSRLRMQYIVN 174
Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
LA EV + RYY RG YVAAI R Q + +Y EAM LV +Y AL +
Sbjct: 175 SLAQYEVHVARYYYGRGAYVAAIARAQTAVKDYQGVPAVREAMQILVNSYDALGMTQLRD 234
Query: 248 EVVSLIQERY 257
+ ++ Y
Sbjct: 235 DAQRVLTASY 244
>gi|91788478|ref|YP_549430.1| hypothetical protein Bpro_2616 [Polaromonas sp. JS666]
gi|91697703|gb|ABE44532.1| putative transmembrane protein [Polaromonas sp. JS666]
Length = 274
Score = 84.5 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 59/248 (23%), Positives = 100/248 (40%), Gaps = 15/248 (6%)
Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90
+ G T ++Y +A + KA + +
Sbjct: 22 LSFVVAGCSTTPE-----PDKTATWSPNKIYAEAKDEASSGAYDKAIPLYEKLEGRAAGT 76
Query: 91 GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY----------VYYLVGMS 140
+A+++ + A+ QY G+ QA + + ++ +P S +DY L S
Sbjct: 77 PLAQQAQIEKAYAQYKGGEQPQAIATLDRFMKLHPASPAMDYALYLKGLVNFNDNLGLFS 136
Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
+ DQ+A K + +V R+ +S Y AR + N LA EV + RYY
Sbjct: 137 FISRQDLSERDQKAAKESFESFRDLVNRFPDSRYTPDARLRMAYIVNSLAQSEVHVARYY 196
Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
RG YVAAI R Q +A Y D EEA L ++Y AL +++ ++ ++++ YPQ
Sbjct: 197 YSRGAYVAAINRAQAAIAEYRDVPALEEATYILYKSYDALGMVELRDDMRRIMEKSYPQS 256
Query: 261 YWARYVET 268
+
Sbjct: 257 QYMSKGFK 264
>gi|120553809|ref|YP_958160.1| DNA uptake lipoprotein [Marinobacter aquaeolei VT8]
gi|120323658|gb|ABM17973.1| DNA uptake lipoprotein [Marinobacter aquaeolei VT8]
Length = 277
Score = 84.1 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 50/222 (22%), Positives = 101/222 (45%), Gaps = 10/222 (4%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
+V ++ YE A + NF++A + + +PF A ++ L F +Y
Sbjct: 24 KEVEVLPEQTYYENAREAMNSGNFNEAEQNLDALETYYPFGRYAEQAQLDLIFARYQNLD 83
Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK----------LML 159
+ + + + +I P+S+++DY Y+ G++ + +
Sbjct: 84 LEGSRAAADRFIRLNPQSEHLDYALYMRGLASYNLDLGLATRYFPVDAAARNPGEQLQAF 143
Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219
+ S+++ R+ +S Y AR + RN++A E+ RYY+KR YVAA R + V+ N
Sbjct: 144 RDFSQLLNRFPDSDYALDARQRMIAIRNRMAELELHAARYYIKREAYVAANNRARYVVEN 203
Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
Y + EEA+ + + + L L A + ++ +++ +P
Sbjct: 204 YPSSPSVEEALMIMADTFRFLELKKGANDAIATLRKNFPNSD 245
>gi|114775489|ref|ZP_01451057.1| probable transmembrane protein [Mariprofundus ferrooxydans PV-1]
gi|114553600|gb|EAU55981.1| probable transmembrane protein [Mariprofundus ferrooxydans PV-1]
Length = 228
Score = 84.1 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 55/222 (24%), Positives = 99/222 (44%)
Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
+ YEK+ + N+++A S +P++ A ++ L+ F Y
Sbjct: 7 KDKPFENDAQRAYEKSKHQVTIGNYAEATMALEHFSSKYPYSKFAIQAELLRIFAAYKDD 66
Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
++ + L + +I +P N DY Y++ MS + D K ++ +++
Sbjct: 67 EFVLSEVLSQRFIDLHPGHANADYAMYMLAMSQYKQRASAEKDPTQNKAAIKSFKKLIRE 126
Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
+ +S Y K + Y+ N LA E+ IG++Y R YVAA RFQ V+ +Y EE
Sbjct: 127 HPDSSYAKQGKMYLQSLYNSLAKHELTIGKFYFDRDRYVAAANRFQQVIQHYQTTPSIEE 186
Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
A+ L +Y + + +A + L+Q YP W+ E +
Sbjct: 187 ALYYLASSYAKMDMKTDASQTAQLLQHNYPHSSWSSKAERFL 228
>gi|330977499|gb|EGH77445.1| competence lipoprotein ComL, putative [Pseudomonas syringae pv.
aptata str. DSM 50252]
Length = 256
Score = 84.1 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 57/232 (24%), Positives = 102/232 (43%), Gaps = 17/232 (7%)
Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
+ + + + + E+Y++A L +++ A E +PF A ++
Sbjct: 18 CSSK-------EVIDENLSEVELYQQAQADLGNNSYNSATEKLKALESRYPFGRYADQAQ 70
Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------RD 147
L + Y G+ + A S E +I +P+ NVDY YY+ G++
Sbjct: 71 LELIYSNYKNGEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDVGLLARFLPLDQ 130
Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
D A + +++ R+ NS Y A+ + RN LA+ E+ + YYL R YV
Sbjct: 131 TKRDPGAARDSFNEFAQLTSRFPNSRYAPDAKQRMIYLRNLLASYEIHVADYYLTRQAYV 190
Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
AA R + V+ N+ + + +A +VE+Y L L D A + +++ YP
Sbjct: 191 AAANRGRYVVENFQETPSVGDGLAVMVESYQRLHLDDLAATSLEVLKTNYPN 242
>gi|305667245|ref|YP_003863532.1| putative lipoprotein [Maribacter sp. HTCC2170]
gi|88708179|gb|EAR00417.1| conserved hypothetical lipoprotein [Maribacter sp. HTCC2170]
Length = 282
Score = 84.1 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 49/272 (18%), Positives = 95/272 (34%), Gaps = 25/272 (9%)
Query: 15 WAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFS 74
++ K + F L + Y+ A + +E+++
Sbjct: 1 MFLKMRK---LLSFLAIAVVLSSC-------NEYQKALKNEDVKAKYDLAQKYYEEEDYK 50
Query: 75 KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
+A F Q + + + + A + Y A E +I YP+S+ V
Sbjct: 51 RANRLFEQIAPKYVGKPQGERVMFFFANTYFETKDYNTAGYQFERFIKSYPKSEKVPQAS 110
Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
+L SY Q+ DQ T L + + + +S Y A + K
Sbjct: 111 FLGAKSYFQLSPLHSLDQTDTDKALIKLQSFINTFPDSEYFDEANKMAKELTTKKERKAF 170
Query: 195 EIGRYYLK-----RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM------ 243
EIG+ + K A+ F +++Y + + EEA+ EA +
Sbjct: 171 EIGKQFNKLGRFDYSFLTPAMAAFDNFISDYPGSIYREEALYLKFEAATEFGMNSFSRLK 230
Query: 244 ----DEAREVVSLIQERYPQGYWARYVETLVK 271
+EA+ S+++++YP+ + L+K
Sbjct: 231 PERLEEAKTAYSVLKKQYPETKFEDDAAKLLK 262
>gi|42521763|ref|NP_967143.1| competence protein ComL [Bdellovibrio bacteriovorus HD100]
gi|39574293|emb|CAE77797.1| Competence protein ComL [Bdellovibrio bacteriovorus HD100]
Length = 245
Score = 84.1 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 53/254 (20%), Positives = 101/254 (39%), Gaps = 10/254 (3%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K I A+ LV + A + K + + +A
Sbjct: 1 MLKTLRVIVILAALGTLVSCASTEKNSN---------TPEGAFAIAEEYDKSERYEEAIR 51
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+ + FP++ A KS L A V Y Y +A + + +P N DYV + +G
Sbjct: 52 RYTEVKNKFPYSNFATKSELAIADVYYKQESYAEAQVSYQMFKELHPTVPNSDYVQFRIG 111
Query: 139 MSYAQM-IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
MSY + D + +S ++++Y NS +V A+ T LA KE I
Sbjct: 112 MSYYNQLPSTIDRDLTLANDTILNLSDLIKKYPNSEFVNEAKEKRTAAIRMLAEKEEYIA 171
Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
+Y KR + +A+ R++ + NY +A++R + + +A++ +++ +
Sbjct: 172 DFYFKRKIFDSALGRYEGLYNNYRGLGFDAKALSRATISAQKIGDTAKAKKYEAVLARDF 231
Query: 258 PQGYWARYVETLVK 271
P + E ++
Sbjct: 232 PGSRELKDAEKELE 245
>gi|70732612|ref|YP_262375.1| competence lipoprotein ComL [Pseudomonas fluorescens Pf-5]
gi|68346911|gb|AAY94517.1| competence lipoprotein ComL [Pseudomonas fluorescens Pf-5]
Length = 341
Score = 83.7 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 57/232 (24%), Positives = 98/232 (42%), Gaps = 17/232 (7%)
Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
+ + V + + E+Y++A L +++ A +PF A ++
Sbjct: 18 CSSK-------EVVDENLSEVELYQQAQTDLDNHSYTSATAKLKALESRYPFGRYADQAQ 70
Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------RD 147
L + Y + + A S E +I +P+ NVDY YYL G++
Sbjct: 71 LELIYANYKNAEPEAAKSAAERFIRLHPQHPNVDYAYYLKGLTSFDQDVGLLARFLPLDM 130
Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
D A + +++ R+ NS Y A+ + RN LAA E+ + YYL R YV
Sbjct: 131 TKRDPGAARDSYNEFAQLTSRFPNSRYAPDAKQRMIYLRNLLAAYEIHVADYYLTRQAYV 190
Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
AA R + V+ N+ + + +A + EAY L L + A + ++ YP
Sbjct: 191 AAANRGRYVVENFQETPSVGDGLAVMTEAYQRLHLDELAATSLETLKLNYPN 242
>gi|167950144|ref|ZP_02537218.1| competence lipoprotein ComL [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 271
Score = 83.7 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 54/226 (23%), Positives = 95/226 (42%), Gaps = 10/226 (4%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
T + Y +A + + ++ A EY+ +PF A ++ L + Y +
Sbjct: 27 DKTKGWSASKFYSEAKSAMMDGDYDGAIEYYEGLEARYPFGRYATQAQLDIIYAHYKNSE 86
Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK----------LML 159
A + E +I +P++ VDY YYL G++ +
Sbjct: 87 PDSAIAAAERFIRLHPQNSYVDYAYYLKGLANFNRNHSITTRFIPIDSSQRDAGAALTSF 146
Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219
+ +V R+ S Y AR + RN LA ++ + RYY++RG Y+AA R V+AN
Sbjct: 147 SDFAELVRRFPESKYASDARQRMIYLRNNLAKYQIHVARYYMRRGAYLAAANRANRVVAN 206
Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
+ +EA+ +V+AY L L + A + ++ G +A
Sbjct: 207 FQRTSVVDEALQIMVDAYTRLGLKNLAADAERVLALNRQNGLFAEE 252
Score = 36.3 bits (81), Expect = 4.1, Method: Composition-based stats.
Identities = 18/111 (16%), Positives = 37/111 (33%)
Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
L + + + + A+K + + G+Y AI ++ + A
Sbjct: 3 LFRFLILALLLSLISACSLLPEQIDKTKGWSASKFYSEAKSAMMDGDYDGAIEYYEGLEA 62
Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
Y +A +A ++ A+ + D A +PQ + Y L
Sbjct: 63 RYPFGRYATQAQLDIIYAHYKNSEPDSAIAAAERFIRLHPQNSYVDYAYYL 113
>gi|27363949|ref|NP_759477.1| putative component of the lipoprotein assembly complex [Vibrio
vulnificus CMCP6]
gi|37678896|ref|NP_933505.1| putative lipoprotein [Vibrio vulnificus YJ016]
gi|27360066|gb|AAO09004.1| Probable component of the lipoprotein assembly complex (forms a
complex with YaeT, YfgL, and NlpB) [Vibrio vulnificus
CMCP6]
gi|37197637|dbj|BAC93476.1| putative lipoprotein [Vibrio vulnificus YJ016]
Length = 241
Score = 83.7 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 53/238 (22%), Positives = 95/238 (39%), Gaps = 17/238 (7%)
Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
+AV L G + + E+Y +A L+ N+ A E +P
Sbjct: 9 LLAVSVLFGCSSS-------EQIVPDVPPAELYAEAQTSLQGGNWLTAIEKLEALDSRYP 61
Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
F + + L + Y + + P + +D+V Y+ G+++ R+
Sbjct: 62 FGAYSEQVQLDLIYAYYKNDDLALGLATISRFTRLNPTHEKMDWVLYMRGLTHMAQDRNF 121
Query: 149 PYD----------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
+D K +++ERY NSPY + ++ + +N+LA ++
Sbjct: 122 MHDLFNIDRSDRDPEPVKQAFDDFKKLLERYPNSPYAEDSQKRMFALKNRLAEYDLATAD 181
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
YYL+R ++AAI R Q + Y D A +++ +EAY L L D LI+
Sbjct: 182 YYLRREAWIAAINRSQELQKTYPDTIAARKSLKIQLEAYKQLGLQDAIARTEELIRLN 239
>gi|146329582|ref|YP_001210176.1| competence protein ComL [Dichelobacter nodosus VCS1703A]
gi|146233052|gb|ABQ14030.1| competence protein ComL [Dichelobacter nodosus VCS1703A]
Length = 278
Score = 83.7 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 53/263 (20%), Positives = 111/263 (42%), Gaps = 16/263 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + V FL G T ++Y+ ++ +++ A +
Sbjct: 1 MKLRKNGVAIIAMVVFLAGCSGMQ------LDHTANWNAHQLYQAGKTEMESSSYTTAID 54
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
YF + +P+ +A++S+L A+ Y AG+ ++A + + + YP+ +DY Y+ G
Sbjct: 55 YFTKLLARYPYGVLAQQSMLDIAYSYYRAGEAEKALAQLDSFSKTYPQHPYIDYALYMKG 114
Query: 139 MSYAQMIRDVPYD----------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
+ + K +++VER+ S Y + AR+ + N
Sbjct: 115 VVEYEKNISFFKRLLPTDLSQTDPTPLKNAFDLFAQLVERFPQSEYAEDARYRMIFLHNL 174
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
L ++EI +YL++G++VAA R + +L +Y A A+A ++ AY L A +
Sbjct: 175 LGKHDLEIADFYLRKGDFVAAAARAKNILEHYETTPSAPYALAIMIRAYRELGQKLLADD 234
Query: 249 VVSLIQERYPQGYWARYVETLVK 271
+ + Y + ++ ++
Sbjct: 235 AMRVFNMNYVDSLESPEIKRYLQ 257
>gi|254451800|ref|ZP_05065237.1| DNA uptake lipoprotein [Octadecabacter antarcticus 238]
gi|198266206|gb|EDY90476.1| DNA uptake lipoprotein [Octadecabacter antarcticus 238]
Length = 207
Score = 83.3 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 59/172 (34%), Positives = 94/172 (54%)
Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
+AF + Y + + + YI YP + Y YL+ +SY I ++ DQ T
Sbjct: 8 HAAFSYHRDQDYPNSRAAAQHYIDFYPVDDDAAYAQYLLALSYYDQIDEIGRDQGLTFQA 67
Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
LQ + ++ERY +S Y + + + + LAAKE+EIGRYYLKR + AA+ RF++V+
Sbjct: 68 LQALRVVIERYPDSEYARSSVLKFDLAFDHLAAKEMEIGRYYLKRDNFAAAVNRFRIVVE 127
Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
++ H EA+ RLVE+Y++L L+DEAR +++ Y W L+
Sbjct: 128 DFQTTSHTPEALHRLVESYLSLGLLDEARSAGAVLGYNYRSTEWYADSFALL 179
Score = 38.6 bits (87), Expect = 0.91, Method: Composition-based stats.
Identities = 16/87 (18%), Positives = 29/87 (33%), Gaps = 8/87 (9%)
Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV--------A 239
+ Y + +Y + Q + Y + A A L +Y
Sbjct: 1 MGQTRADHAAFSYHRDQDYPNSRAAAQHYIDFYPVDDDAAYAQYLLALSYYDQIDEIGRD 60
Query: 240 LALMDEAREVVSLIQERYPQGYWARYV 266
L +A + + ++ ERYP +AR
Sbjct: 61 QGLTFQALQALRVVIERYPDSEYARSS 87
>gi|148244619|ref|YP_001219313.1| competence lipoprotein ComL [Candidatus Vesicomyosocius okutanii
HA]
gi|146326446|dbj|BAF61589.1| competence lipoprotein ComL [Candidatus Vesicomyosocius okutanii
HA]
Length = 255
Score = 83.3 bits (203), Expect = 4e-14, Method: Composition-based stats.
Identities = 57/258 (22%), Positives = 101/258 (39%), Gaps = 14/258 (5%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
L I V L G +++ ++S+T + + +A +KA + F
Sbjct: 1 MKKLFIILPFLVLLLNGCSW--QKEIKIESITKGWSPKTFFTQAKEQESLGLTNKAIKLF 58
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
Q +P + A +S L A+ Y Y QA YI YPE + Y YYL G+
Sbjct: 59 EQLQATYPGSKYALQSKLEIAYALYKNKDYDQAIYHLNNYIKFYPEHFSTPYAYYLRGVI 118
Query: 141 YAQMIRDVPYDQRAT---------KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
R D + Y +++++ + Y + + RN L+
Sbjct: 119 SQDKSRSFLDDYFTDSAQRSVNSVRNAFNYYLALIDKFPKTKYTEDTITRLVALRNILSR 178
Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
E+ I YY K+G +AAI R + ++ Y + A+ + Y A+ A++
Sbjct: 179 HELFIAIYYTKKGANIAAINRTKFIVEKYQNTPSVPAALHLMATNYDAINAGTLAKDTRR 238
Query: 252 LIQERYPQGYWARYVETL 269
++++ YP W +L
Sbjct: 239 VLEKNYP---WYTPYYSL 253
>gi|320157326|ref|YP_004189705.1| putative component of the lipoprotein assembly complex [Vibrio
vulnificus MO6-24/O]
gi|319932638|gb|ADV87502.1| probable component of the lipoprotein assembly complex (forms a
complex with YaeT, YfgL, and NlpB) [Vibrio vulnificus
MO6-24/O]
Length = 241
Score = 82.9 bits (202), Expect = 4e-14, Method: Composition-based stats.
Identities = 52/238 (21%), Positives = 95/238 (39%), Gaps = 17/238 (7%)
Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
+AV L G + + E+Y +A L+ N+ A E +P
Sbjct: 9 LLAVSVLFGCSSS-------EQIVPDVPPAELYAEAQTSLQGGNWLTAIEKLEALDSRYP 61
Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
F + + L + Y + + P + +D+V Y+ G+++ R+
Sbjct: 62 FGAYSEQVQLDLIYAYYKNDDLALGLATISRFTRLNPTHEKMDWVLYMRGLTHMAQDRNF 121
Query: 149 PYD----------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
+D K +++ERY +SPY + ++ + +N+LA ++
Sbjct: 122 MHDLFNIDRSDRDPEPVKQAFDDFKKLLERYPSSPYAEDSQKRMFALKNRLAEYDLATAD 181
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
YYL+R ++AAI R Q + Y D A +++ +EAY L L D LI+
Sbjct: 182 YYLRREAWIAAINRSQELQKTYPDTIAARKSLKIQLEAYKQLGLQDAIARTEELIRLN 239
>gi|269962552|ref|ZP_06176900.1| putative lipoprotein [Vibrio harveyi 1DA3]
gi|269832747|gb|EEZ86858.1| putative lipoprotein [Vibrio harveyi 1DA3]
Length = 242
Score = 82.9 bits (202), Expect = 4e-14, Method: Composition-based stats.
Identities = 52/238 (21%), Positives = 97/238 (40%), Gaps = 17/238 (7%)
Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
+AV L G + + + E+Y A L+ N+ A E +P
Sbjct: 9 LLAVSLLFGCASK-------EEIVPDVPPSELYADAQTSLQSGNWLSAIEKLEALDSRYP 61
Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
F + + L + Y + ++ P + +D+V Y+ G+S+ R+
Sbjct: 62 FGAYSEQVQLDLIYAYYKNDDLALGLATISRFMRLNPTHEKMDWVLYMRGLSHMAQDRNF 121
Query: 149 PYD----------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
+D K ++++RY NSPY + ++ + +N+LA ++
Sbjct: 122 MHDLFNVDRSDRDPEPVKKAFDDFKKLLDRYPNSPYAEDSQKRMVALKNRLADYDLATAD 181
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
+YL+R ++AAI R Q + + D E A +++ +EAY L L D LI+
Sbjct: 182 FYLRREAWIAAINRAQELQKAFPDTEAARKSLEIQLEAYKQLKLDDSVARTEELIKLN 239
>gi|262273644|ref|ZP_06051457.1| probable component of the lipoprotein assembly complex (forms a
complex with YaeT YfgL and NlpB) [Grimontia hollisae CIP
101886]
gi|262222059|gb|EEY73371.1| probable component of the lipoprotein assembly complex (forms a
complex with YaeT YfgL and NlpB) [Grimontia hollisae CIP
101886]
Length = 243
Score = 82.9 bits (202), Expect = 4e-14, Method: Composition-based stats.
Identities = 45/231 (19%), Positives = 95/231 (41%), Gaps = 17/231 (7%)
Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
G + + + E+Y++A + L E N++ A + +PF + +
Sbjct: 16 AGCAGK-------EEIVPDIPPSELYQEAQVSLNEGNWNTAIQKLEALDSRYPFGAYSEQ 68
Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------I 145
L + Y + + +I P +D+V Y+ G++ +
Sbjct: 69 VQLDLIYAYYKNDDLALGEATIDRFIRMNPGHPEMDWVLYMRGLTNMAQDRSLVHDLLSM 128
Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
D + R+++RY +S Y A + +N+LA E+ +Y++R
Sbjct: 129 EREDRDPEPVRRAFVDFRRLLDRYPDSDYAADAAKRLVALKNRLADYELATADFYVRREA 188
Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
+VA I R Q + ++ D A+ ++ +++AY AL L + A+ + L++
Sbjct: 189 WVAVINRCQQIQRDFPDTNAAKRSLPMMLKAYEALKLEEPAQRIRELMKLN 239
>gi|108757392|ref|YP_630233.1| putative competence lipoprotein ComL [Myxococcus xanthus DK 1622]
gi|108461272|gb|ABF86457.1| putative competence lipoprotein ComL [Myxococcus xanthus DK 1622]
Length = 261
Score = 82.9 bits (202), Expect = 4e-14, Method: Composition-based stats.
Identities = 55/252 (21%), Positives = 101/252 (40%), Gaps = 10/252 (3%)
Query: 27 FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86
F S + F G + E L+ ++F +A +YF
Sbjct: 10 FLSAFLLFGTGCASLT--QGQAGEPDYAAVADENLRLGSEALENKDFFRAQKYFEYVRTK 67
Query: 87 FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146
FP+ AR++ L A V + + +A + +I +P VDY + M++ +
Sbjct: 68 FPYQEAAREAELKLADVDFEREAFPEAKEQYQSFIKLHPTHAKVDYAAFRSAMTHVRAYP 127
Query: 147 DVPYDQRATKL--------MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
+ ++ L M + +Y S YV A+ R +LA+ E+ +
Sbjct: 128 SEFFALPPSREKDQGEIRSALVAMEEFLRQYPQSQYVAEAKTQREDARRRLASHELYAAQ 187
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
+Y KR + A R + +L Y E+ EEA+ L +AYV L ++A++ + + R P
Sbjct: 188 FYQKRERWKAVAQRLEGLLRRYPGTEYEEEALFDLHDAYVKLNDTEKAQDTLRQVLRRLP 247
Query: 259 QGYWARYVETLV 270
A + ++
Sbjct: 248 GTPAAERAQRML 259
>gi|261416538|ref|YP_003250221.1| outer membrane assembly lipoprotein YfiO [Fibrobacter succinogenes
subsp. succinogenes S85]
gi|261372994|gb|ACX75739.1| outer membrane assembly lipoprotein YfiO [Fibrobacter succinogenes
subsp. succinogenes S85]
Length = 293
Score = 82.9 bits (202), Expect = 4e-14, Method: Composition-based stats.
Identities = 47/240 (19%), Positives = 101/240 (42%), Gaps = 5/240 (2%)
Query: 13 EAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQN 72
L+K L + F + + ++G S++ T + + YE A K +
Sbjct: 8 RKKMKNLFKCTLFVPFFLYMATVMGCSTASTKK-----TTHTEWCKARYEAAEELFKAKK 62
Query: 73 FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132
+ +A E + +G ++ + A ++ ++ +A +I +P S +
Sbjct: 63 YGRATERLEEILSTCAGSGYMEQAQFLLAESHFNLEQWIEARGEYGSFIVNFPGSPFAET 122
Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
+ +S M + D+ T ++ R + + N+P +Y + +++A K
Sbjct: 123 AEFRKAVSSFNMDYRIDRDESNTTTAMKDFERYLANHPNTPLRDSVNYYYNLLVDRVAEK 182
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
E + GR YL+ + AA+ F+ L Y A+ +EA+ + +AY L + AR+ ++
Sbjct: 183 EFQTGRLYLRMEKPQAAVIYFKEFLETYPKAQRRQEALFLISDAYTDLDQFESARQYLAT 242
Score = 35.5 bits (79), Expect = 8.4, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 29/75 (38%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
E K +Y A R + +L+ + + + E+A L E++ L EAR
Sbjct: 50 RYEAAEELFKAKKYGRATERLEEILSTCAGSGYMEQAQFLLAESHFNLEQWIEARGEYGS 109
Query: 253 IQERYPQGYWARYVE 267
+P +A E
Sbjct: 110 FIVNFPGSPFAETAE 124
>gi|268316246|ref|YP_003289965.1| outer membrane assembly lipoprotein YfiO [Rhodothermus marinus DSM
4252]
gi|262333780|gb|ACY47577.1| outer membrane assembly lipoprotein YfiO [Rhodothermus marinus DSM
4252]
Length = 280
Score = 82.9 bits (202), Expect = 4e-14, Method: Composition-based stats.
Identities = 57/252 (22%), Positives = 91/252 (36%), Gaps = 18/252 (7%)
Query: 28 FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87
+ + G +E +E+A+ F + + +A EYF
Sbjct: 13 LLVIGLLVAGCAGSGR--------LRHSSPQEAFERAMEFYNQGKYDRAIEYFKAVFTYG 64
Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147
A + A Y +Y AAS E +I Y V Y M Y ++
Sbjct: 65 RTHEWAADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAEYERAMCYYKLSPP 124
Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
DQ T+ ++ ++RY N V A + R +LA K+ E R Y +R Y
Sbjct: 125 YELDQTDTRKAIEAFQLFIDRYPNHELVDDATQKIRELRAKLARKQYEAARLYERRELYE 184
Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD----------EAREVVSLIQERY 257
AA ++ V Y D A++A+ + AY+A A A E+ + + +
Sbjct: 185 AAAVTYEAVFDAYPDTPWADDALVGAMRAYIAYAEQSVRARQPERYRRAVELYERLLQIF 244
Query: 258 PQGYWARYVETL 269
P R E L
Sbjct: 245 PDSPLLRTAEEL 256
>gi|238897771|ref|YP_002923450.1| outer membrane protein assembly complex subunit, DNA uptake
lipoprotein [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
gi|229465528|gb|ACQ67302.1| outer membrane protein assembly complex subunit, DNA uptake
lipoprotein [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
Length = 242
Score = 82.9 bits (202), Expect = 5e-14, Method: Composition-based stats.
Identities = 58/245 (23%), Positives = 101/245 (41%), Gaps = 18/245 (7%)
Query: 20 YKFALTIFF-SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
KF + SI L + + + E+Y A L E NF +A
Sbjct: 1 MKFIKHLVIPSIFALTLSACSKN-------KRIVPDQPASELYAVAQKALSEGNFREAIT 53
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY--- 135
FPF G +++ L + Y + + A + + +I P S N+DYV Y
Sbjct: 54 QLEALDTRFPFGGYSQQVQLDLIYAYYKSDQLALAQASIDRFIRLNPTSPNIDYVLYLRG 113
Query: 136 -------LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
+ + D + ++++ + NS Y+ A+ + +++
Sbjct: 114 LTEMGLDENQLQNFFGVDRSDRDPEHALRAFRDFQQLIQYHPNSTYLADAQKRLIFLKDR 173
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
LA E+ + +YY+KR YVA I R + +L NY D + A+ + +AY L L ++A +
Sbjct: 174 LATHELAVVQYYIKREAYVAVINRVEEMLKNYPDTQATRTALPLMEQAYRKLQLHEQADK 233
Query: 249 VVSLI 253
V LI
Sbjct: 234 VAKLI 238
>gi|315126098|ref|YP_004068101.1| TPR repeat-containing lipoprotein [Pseudoalteromonas sp. SM9913]
gi|315014612|gb|ADT67950.1| TPR repeat-containing lipoprotein [Pseudoalteromonas sp. SM9913]
Length = 254
Score = 82.5 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 53/249 (21%), Positives = 110/249 (44%), Gaps = 12/249 (4%)
Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
++ K A I FS++V L ++ R + +YE A L +++A
Sbjct: 4 KIGKRAFAIVFSVSVLSLGACSSAPDQEDI--QRVPNRSAQALYEDAKQTLDSGLYARAI 61
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL- 136
E +PF +++ + + Y +G +QA + + +I P K++DY+YY+
Sbjct: 62 ELLTAIDSRYPFGPFSKQVQMDLVYAHYQSGNTEQALATIDRFIRLNPNHKDLDYMYYMR 121
Query: 137 ---------VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
+ D + T++ +S +V+R+ S Y A+ + N
Sbjct: 122 GLVNIKADKNAFQEYFGVDRADRDAKRTRVAYTDLSTLVKRFPESDYAPEAKRRLVWLLN 181
Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
++A E+++ YY +R Y+AA R + V+ +YS + + + A+A + ++Y L L + ++
Sbjct: 182 RMARYELKVATYYYEREAYLAAANRGKYVVEHYSQSSYLDAALAMMEKSYEKLGLTELSQ 241
Query: 248 EVVSLIQER 256
+
Sbjct: 242 HAEQTRKFN 250
>gi|89075040|ref|ZP_01161481.1| hypothetical protein SKA34_21630 [Photobacterium sp. SKA34]
gi|89049127|gb|EAR54692.1| hypothetical protein SKA34_21630 [Photobacterium sp. SKA34]
Length = 242
Score = 82.5 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 53/246 (21%), Positives = 97/246 (39%), Gaps = 17/246 (6%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
LTI +AV L G + + +Y A L++ N++ A E
Sbjct: 1 MKRLTITTLLAVALLSGCSSKEDVIPDV-------PPSNLYATAQTALQKGNWTSAIEQL 53
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
+PF + + L + Y + + E ++ P+ D+V Y+ G++
Sbjct: 54 EALDSRYPFGAYSDQVQLDLIYAYYKSDDLALGEATIERFLRLNPDHPQADWVVYMRGLT 113
Query: 141 YAQMIRDVPYDQRAT----------KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
+ R +D + + ++ERY S Y A+ + +N+LA
Sbjct: 114 HMAQDRSFMHDMFNINRFDRDPTPSRQAFKDFKYLLERYPESEYSADAKTRMIFLKNRLA 173
Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
++ +Y++R ++AAI R Q + YSD E A +++A AY L L E
Sbjct: 174 NYDLATVDFYIRREAWIAAINRCQQIQRLYSDTEAARQSLALEKTAYEKLNLQKEVERTD 233
Query: 251 SLIQER 256
L++
Sbjct: 234 KLMKLN 239
>gi|241763388|ref|ZP_04761443.1| outer membrane assembly lipoprotein YfiO [Acidovorax delafieldii
2AN]
gi|241367430|gb|EER61741.1| outer membrane assembly lipoprotein YfiO [Acidovorax delafieldii
2AN]
Length = 265
Score = 82.5 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 67/237 (28%), Positives = 102/237 (43%), Gaps = 16/237 (6%)
Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
T +Y +A L F KA + +A+++
Sbjct: 21 CSSTPEDK------TAGWSPNRIYSEAKDELGSGAFDKAVPLLEKLEGRAAGTPLAQQAQ 74
Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY----------VYYLVGMSYAQMIRD 147
L A+ QY G+ QA + + +I +P S +DY L S+
Sbjct: 75 LDKAYAQYKGGEKAQAIATLDRFIKLHPASPALDYALYLKGLVNFNDNLGLFSWVSQQDL 134
Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
DQ+A K + +S +V R+ +S Y K AR +T N LA EV + RYY +RG YV
Sbjct: 135 SERDQKAAKDSFESLSELVTRFPDSRYAKDARQRMTYIVNSLAQYEVHVARYYYERGAYV 194
Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
AAI R Q LA+Y EEA+ L+++Y AL + + +++ YPQG A+
Sbjct: 195 AAIGRAQSALADYQGVPALEEALYILMQSYDALGMTQLRDDTRRVMEASYPQGALAK 251
>gi|260598976|ref|YP_003211547.1| outer membrane biogenesis protein BamD [Cronobacter turicensis
z3032]
gi|260218153|emb|CBA32978.1| UPF0169 lipoprotein yfiO [Cronobacter turicensis z3032]
Length = 229
Score = 82.5 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 48/232 (20%), Positives = 89/232 (38%), Gaps = 17/232 (7%)
Query: 35 LVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR 94
+ G E+Y A L++ N+ A +PF ++
Sbjct: 1 MAGCSGSKEE-------VPDNPPSEIYATAQQKLQDGNWKAAITQLEALDNRYPFGPYSQ 53
Query: 95 KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR-------- 146
+ L + Y A + + +I P N+DYV Y+ G++ +
Sbjct: 54 QVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVIYMRGLTNMALDDSALQGFFG 113
Query: 147 --DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204
D + + + S++V Y S Y A + +++L+ E+ + +YY KRG
Sbjct: 114 VDRSDRDPQHARDAFRDFSKLVRGYPQSQYSTDATKRLVYLKDRLSKYELSVAQYYTKRG 173
Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
+VA + R +L +Y D + E + + AY L L +A +V +I
Sbjct: 174 AWVAVVNRVDGMLRDYPDTQATHEGLGLMENAYRELQLNAQADKVAKIIAAN 225
>gi|319942385|ref|ZP_08016699.1| hypothetical protein HMPREF9464_01918 [Sutterella wadsworthensis
3_1_45B]
gi|319804073|gb|EFW00981.1| hypothetical protein HMPREF9464_01918 [Sutterella wadsworthensis
3_1_45B]
Length = 262
Score = 82.5 bits (201), Expect = 6e-14, Method: Composition-based stats.
Identities = 52/249 (20%), Positives = 97/249 (38%), Gaps = 15/249 (6%)
Query: 20 YKFALT--IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
+K L S T ++Y +A + L + N+++A
Sbjct: 7 FKRLLMRGCALLSVTLATASCSWLQS---LDKDQTLDWSAEKLYSEARVALDDSNWTQAK 63
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
+Y+ + +PF A+++ + + + G A + ++ YP N DYV YL
Sbjct: 64 DYYQKLEARYPFGQYAQQAQIELIYATWKDGDAPGAVQAADRFLQTYPNHANADYVMYLK 123
Query: 138 GMSYAQMIRDVPY----------DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
++ D A++ +V RY +S + AR +
Sbjct: 124 ALATLNETDSWFNKLAGEDLAERDANASREAFDIFKELVMRYPDSRFTPEARRRMHGLVL 183
Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
A E++ RYY R YVAAI R Q V+ + + ++A+ + ++Y AL L + A
Sbjct: 184 AQAEHELKTARYYFVRNAYVAAIERAQRVVREFQNTPMRDDALELIAQSYEALKLTELAA 243
Query: 248 EVVSLIQER 256
+ +I+
Sbjct: 244 DTRRIIELN 252
>gi|153006273|ref|YP_001380598.1| tetratricopeptide domain-containing protein [Anaeromyxobacter sp.
Fw109-5]
gi|152029846|gb|ABS27614.1| Tetratricopeptide domain protein [Anaeromyxobacter sp. Fw109-5]
Length = 258
Score = 82.5 bits (201), Expect = 6e-14, Method: Composition-based stats.
Identities = 56/250 (22%), Positives = 101/250 (40%), Gaps = 10/250 (4%)
Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
L R + + YE V LK NFS+A ++F FP
Sbjct: 7 LALCVLLSACGS--KRVSFSGQIKYEPTAEANYEAGVDELKHDNFSEAVKFFEYVRTKFP 64
Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY--------YLVGMS 140
F+ A S L A +++ +Y +AA ++++T +P + V+Y
Sbjct: 65 FSKYAPLSELRLADLKFDQERYVEAAEAYQQFVTMHPTHEEVEYAELRVGLSYLRDAPGD 124
Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
+ DQR + + + V+ +S + AR + +LA+ E +G YY
Sbjct: 125 FVLFPPAHEKDQRQVEKAARALRDFVQAKPDSKHAPQARKLLAEAEGRLASHEWYVGEYY 184
Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
KR + A R++ ++A Y + H EA+ +L +Y+ + AR + + ++PQ
Sbjct: 185 FKRKRWAGAAGRYEALVAKYPGSRHEAEALMKLARSYLEIDEKHRARTALQKLIVKHPQD 244
Query: 261 YWARYVETLV 270
E L+
Sbjct: 245 PRRPEAEKLL 254
>gi|87119408|ref|ZP_01075305.1| competence lipoprotein ComL, putative [Marinomonas sp. MED121]
gi|86164884|gb|EAQ66152.1| competence lipoprotein ComL, putative [Marinomonas sp. MED121]
Length = 280
Score = 82.5 bits (201), Expect = 6e-14, Method: Composition-based stats.
Identities = 54/253 (21%), Positives = 103/253 (40%), Gaps = 16/253 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
L K L + + + L+G + + E Y+ A + A +
Sbjct: 3 LRKSLLQLSGFVGISLLLGACSNAPVQEP------DLPESEYYQNAQEAFDQGRPLVAVQ 56
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+PF +++ L + + A Y A + E +I +YPE + +DYVYY
Sbjct: 57 NLKDLDSRYPFGEFTQRAELEIIYAYFLASDYISAHANAERFIKKYPEFETIDYVYYYRA 116
Query: 139 ----------MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
+ D + + +++R+ S Y A+ + RN
Sbjct: 117 LSTFKGGETLSTRYLNQDPSQRDSSEFIKAFREFADLLKRFPESSYASDAKARMIYLRNT 176
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
+A E+++ +YY KR +AA+ R Q VL Y ++ E+A+A ++AY+ L + A +
Sbjct: 177 IARHELQVAKYYFKRNAPLAALHRSQTVLNKYPSSDSVEDALAINIQAYIELEQFELADQ 236
Query: 249 VVSLIQERYPQGY 261
++++ YP
Sbjct: 237 NLAILTNNYPASK 249
>gi|119470040|ref|ZP_01612845.1| putative lipoprotein with tetratricopeptide repeats (TPR) domain
[Alteromonadales bacterium TW-7]
gi|119446750|gb|EAW28023.1| putative lipoprotein with tetratricopeptide repeats (TPR) domain
[Alteromonadales bacterium TW-7]
Length = 254
Score = 82.5 bits (201), Expect = 6e-14, Method: Composition-based stats.
Identities = 53/249 (21%), Positives = 107/249 (42%), Gaps = 12/249 (4%)
Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
++ K A I FS++V L ++ R + +YE A L +++A
Sbjct: 4 KIGKRAFAIVFSVSVLSLGACSSAPDQEDI--QRVPNRSAQALYEDAKETLDSGLYARAI 61
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL- 136
E + +PF +++ + + Y +G +QA + + +I P K++DY+YY+
Sbjct: 62 ELLSAIDSRYPFGPFSKQVQMDLVYAHYQSGNTEQALATIDRFIRLNPNHKDLDYMYYMR 121
Query: 137 ---------VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
I D T++ +S +V+R+ S Y A+ + N
Sbjct: 122 GLVNIKADKNAFQEYFGIDRADRDANRTRVAFTDLSTLVKRFPQSGYAPEAKRRLVWLLN 181
Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
++A E+++ YY +R Y+AA R + V+ +YS + + A+ + ++Y L L + ++
Sbjct: 182 RMARYELKVATYYYEREAYLAAANRGKFVVEHYSQSSYLNAALDMMQKSYEKLGLTELSQ 241
Query: 248 EVVSLIQER 256
Sbjct: 242 NAKKAQALN 250
>gi|312881915|ref|ZP_07741678.1| putative lipoprotein [Vibrio caribbenthicus ATCC BAA-2122]
gi|309370433|gb|EFP97922.1| putative lipoprotein [Vibrio caribbenthicus ATCC BAA-2122]
Length = 241
Score = 82.5 bits (201), Expect = 6e-14, Method: Composition-based stats.
Identities = 49/248 (19%), Positives = 104/248 (41%), Gaps = 19/248 (7%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K L+ ++V L G V E+Y A L+ N++ A +
Sbjct: 1 MKKHLLSGLVVLSV--LAGCSSSKD-------VVPDIPPSELYSDAQSSLQSGNWTNAIK 51
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+PF + + L + Y + +++ + ++ P ++ +D+V Y+ G
Sbjct: 52 KLEALDSRYPFGAYSEQVQLDLIYAYYKNDELALSSATIDRFMRLNPTNERLDWVLYMRG 111
Query: 139 MSYAQMIRDVPY----------DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
+++ ++ + D K ++++RY +S Y + A+ + +N+
Sbjct: 112 LTHMAQDQNFMHSVFNIDRSDRDPEPVKKAFADFKKLLQRYPDSQYAEDAKLRLIALKNR 171
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
LA ++ +YL+R ++AAI R Q + Y + E A +++ +EAY L + +
Sbjct: 172 LANYDLATADFYLRREAWIAAIKRCQEIQKTYPNTEAARQSLPIQLEAYKQLGMQEAIDR 231
Query: 249 VVSLIQER 256
LIQ
Sbjct: 232 TKMLIQLN 239
>gi|28897332|ref|NP_796937.1| hypothetical protein VP0558 [Vibrio parahaemolyticus RIMD 2210633]
gi|153839764|ref|ZP_01992431.1| lipoprotein, ComL family [Vibrio parahaemolyticus AQ3810]
gi|260364019|ref|ZP_05776750.1| competence lipoprotein ComL [Vibrio parahaemolyticus K5030]
gi|260876295|ref|ZP_05888650.1| competence lipoprotein ComL [Vibrio parahaemolyticus AN-5034]
gi|260895102|ref|ZP_05903598.1| competence lipoprotein ComL [Vibrio parahaemolyticus Peru-466]
gi|260903278|ref|ZP_05911673.1| competence lipoprotein ComL [Vibrio parahaemolyticus AQ4037]
gi|28805541|dbj|BAC58821.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD
2210633]
gi|149746717|gb|EDM57705.1| lipoprotein, ComL family [Vibrio parahaemolyticus AQ3810]
gi|308088893|gb|EFO38588.1| competence lipoprotein ComL [Vibrio parahaemolyticus Peru-466]
gi|308092865|gb|EFO42560.1| competence lipoprotein ComL [Vibrio parahaemolyticus AN-5034]
gi|308107944|gb|EFO45484.1| competence lipoprotein ComL [Vibrio parahaemolyticus AQ4037]
gi|308115633|gb|EFO53173.1| competence lipoprotein ComL [Vibrio parahaemolyticus K5030]
gi|328472094|gb|EGF42971.1| hypothetical protein VP10329_03035 [Vibrio parahaemolyticus 10329]
Length = 242
Score = 82.1 bits (200), Expect = 7e-14, Method: Composition-based stats.
Identities = 53/238 (22%), Positives = 100/238 (42%), Gaps = 17/238 (7%)
Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
+AV L G + + + E+Y A + L+ N+ A E +P
Sbjct: 9 LLAVSLLFGCASK-------EEIVPDVPPSELYADAQVSLQSGNWLSAIEKLEALDSRYP 61
Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
F + + L + Y + ++ P + +D+V Y+ G+S+ R+
Sbjct: 62 FGAYSEQVQLDLIYAYYKNDDLALGLATISRFMRLNPTHEKMDWVLYMRGLSHMAQDRNF 121
Query: 149 PYD----------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
+D K ++++RY NSPY + A+ + +N+LA ++
Sbjct: 122 MHDLFSIDRSDRDPEPVKKAFDDFKKLLQRYPNSPYAEDAQKRMVALKNRLANYDLATAD 181
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
+YL+R ++AAI R Q + ++ D E A +++ +EAY L L D +LI+
Sbjct: 182 FYLRREAWIAAINRSQELQKSFPDTEAARKSLEIQLEAYKQLQLEDAVARTEALIKLN 239
>gi|153834661|ref|ZP_01987328.1| lipoprotein, ComL family [Vibrio harveyi HY01]
gi|156973323|ref|YP_001444230.1| hypothetical protein VIBHAR_01004 [Vibrio harveyi ATCC BAA-1116]
gi|148868913|gb|EDL67971.1| lipoprotein, ComL family [Vibrio harveyi HY01]
gi|156524917|gb|ABU70003.1| hypothetical protein VIBHAR_01004 [Vibrio harveyi ATCC BAA-1116]
Length = 242
Score = 82.1 bits (200), Expect = 7e-14, Method: Composition-based stats.
Identities = 53/238 (22%), Positives = 97/238 (40%), Gaps = 17/238 (7%)
Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
+AV L G + + + E+Y A L+ N+ A E +P
Sbjct: 9 LLAVSLLFGCASK-------EEIVPDVPPSELYADAQTSLQSGNWLSAIEKLEALDSRYP 61
Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
F + + L + Y + ++ P + +D+V Y+ G+S+ R+
Sbjct: 62 FGAYSEQVQLDLIYAYYKNDDLALGLATISRFMRLNPTHEKMDWVLYMRGLSHMAQDRNF 121
Query: 149 PYD----------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
+D K +++ERY NSPY + ++ + +N+LA ++
Sbjct: 122 MHDLFNVDRSDRDPEPVKKAFDDFKKLLERYPNSPYAEDSQKRMVALKNRLANYDLATAD 181
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
+YL+R ++AAI R Q + + D E A +++ +EAY L L D LI+
Sbjct: 182 FYLRREAWIAAINRSQELQKAFPDTEAARKSLEIQLEAYKQLKLDDAVARTEELIKLN 239
>gi|261346209|ref|ZP_05973853.1| competence lipoprotein ComL [Providencia rustigianii DSM 4541]
gi|282565515|gb|EFB71050.1| competence lipoprotein ComL [Providencia rustigianii DSM 4541]
Length = 242
Score = 82.1 bits (200), Expect = 7e-14, Method: Composition-based stats.
Identities = 53/230 (23%), Positives = 98/230 (42%), Gaps = 17/230 (7%)
Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
G + V+ E+Y L++ N+S A + F +PF A++
Sbjct: 19 GCSSN-------NEVSPDSSPAEIYSTGQQKLQDGNYSAAIKQFEALDNRYPFGPYAQQV 71
Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
L + Y + + A + + ++ P N+DYV Y+ G++ + +
Sbjct: 72 QLDLIYAYYKSAELPMAIATIDRFMRLNPTHPNIDYVLYMRGLTAMALDDSMLQGFFGID 131
Query: 157 L----------MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
+ +S++V Y NS Y A + +++LA ++ + YY KRG Y
Sbjct: 132 RSDRDPQHALVAFKDLSQLVRYYPNSQYSNDASKRLVYLKDRLAKFDLSVVEYYNKRGAY 191
Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
VA + R Q +L +Y D E +A+ + AY + L +EA +V S++
Sbjct: 192 VAVVNRVQQMLRDYPDTEATRKALTYMEIAYKEMGLDNEANKVASILAAN 241
>gi|157369128|ref|YP_001477117.1| outer membrane protein assembly complex subunit YfiO [Serratia
proteamaculans 568]
gi|157320892|gb|ABV39989.1| putative lipoprotein [Serratia proteamaculans 568]
Length = 243
Score = 82.1 bits (200), Expect = 7e-14, Method: Composition-based stats.
Identities = 51/230 (22%), Positives = 93/230 (40%), Gaps = 17/230 (7%)
Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
G E+Y A L++ NF A +PF +++
Sbjct: 19 GCSTSKD-------AVPDNPPSEIYATAQQKLQDGNFKGAITQLEALDNRYPFGPYSQQV 71
Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR---------- 146
L + Y + A + + ++ P N+DYV Y+ G++ +
Sbjct: 72 QLDLIYAYYKSADLPLAQASIDRFMRLNPTHPNIDYVMYMRGLTDMALDDSALQGFFGVD 131
Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
D + + + S+++++Y NS YV A + +++LA E+ + YY KRG Y
Sbjct: 132 RSDRDPQHARAAFRDFSQLIQQYPNSQYVTDANKRLVYLKDRLAKYELSVVEYYTKRGAY 191
Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
VA + R + +L Y D + +A+ + AY L L +A +V +I
Sbjct: 192 VAVVNRAEQMLREYPDTKATRDALPLMENAYKQLQLNGQADKVAKVIAAN 241
>gi|317493977|ref|ZP_07952394.1| outer membrane assembly lipoprotein YfiO [Enterobacteriaceae
bacterium 9_2_54FAA]
gi|316918304|gb|EFV39646.1| outer membrane assembly lipoprotein YfiO [Enterobacteriaceae
bacterium 9_2_54FAA]
Length = 245
Score = 82.1 bits (200), Expect = 8e-14, Method: Composition-based stats.
Identities = 53/230 (23%), Positives = 94/230 (40%), Gaps = 17/230 (7%)
Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
G E+Y A L++ NF A +PF +++
Sbjct: 19 GCSSSKD-------AVPDNPPSEIYATAQQKLQDGNFKAAITQLEALDNRYPFGPYSQQV 71
Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR---------- 146
L + Y + A + + ++ P N+DYV Y+ G++ +
Sbjct: 72 QLDLIYAYYKSADLPMAQASIDRFMRLNPTHPNIDYVLYMRGLTDMALDDSALQGFFGID 131
Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
D + + S++V+RY NS Y A + +++LA E+ + +YY KRG Y
Sbjct: 132 RSDRDPEHARQAFRDFSQLVQRYPNSQYSADATKRLVYLKDRLAKYELSVAQYYTKRGAY 191
Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
VA + R + +L NY D + +A+ + AY + L +A +V +I E
Sbjct: 192 VAVVNRVENMLRNYPDTQATRDALPLMENAYKQMNLTAQADKVAKIIAEN 241
>gi|192359694|ref|YP_001983660.1| competence protein ComL [Cellvibrio japonicus Ueda107]
gi|190685859|gb|ACE83537.1| competence protein ComL [Cellvibrio japonicus Ueda107]
Length = 327
Score = 82.1 bits (200), Expect = 8e-14, Method: Composition-based stats.
Identities = 57/234 (24%), Positives = 106/234 (45%), Gaps = 17/234 (7%)
Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
G + + ++Y+ A L + A + +FPF A +
Sbjct: 42 TGCASKEKEPKV-------TTEADLYQAAERQLNNSQWQTAIKNLQTLEENFPFGTYAEQ 94
Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP------ 149
+ L + Y +G+ A + +I +P+ +NVDY YY++GMS + +
Sbjct: 95 AQLELIYAYYMSGEPDAAIATANRFIRLHPQHRNVDYAYYMLGMSSFTKDKGMFERVLPV 154
Query: 150 ----YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
D A + L ++++ RY +S Y A+ + RN LA E+ + YY KRG
Sbjct: 155 DITRRDPGAARESLANFTQLLNRYPDSAYAADAKKRMLFLRNLLARYEIHVANYYFKRGA 214
Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
Y+AA+ R + VL N+ +A+A +V+ Y +++ +A E++ +++ YP
Sbjct: 215 YIAAVGRGRYVLENFPKTPAIPDALAVMVQGYRLMSMSTQADEMLEILRTNYPN 268
Score = 37.9 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 17/93 (18%), Positives = 30/93 (32%)
Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
+ A + L ++ AI Q + N+ +AE+A L+ AY
Sbjct: 44 CASKEKEPKVTTEADLYQAAERQLNNSQWQTAIKNLQTLEENFPFGTYAEQAQLELIYAY 103
Query: 238 VALALMDEAREVVSLIQERYPQGYWARYVETLV 270
D A + +PQ Y ++
Sbjct: 104 YMSGEPDAAIATANRFIRLHPQHRNVDYAYYML 136
>gi|332535271|ref|ZP_08411073.1| putative component of the lipoprotein assembly complex
[Pseudoalteromonas haloplanktis ANT/505]
gi|332035302|gb|EGI71806.1| putative component of the lipoprotein assembly complex
[Pseudoalteromonas haloplanktis ANT/505]
Length = 254
Score = 81.8 bits (199), Expect = 9e-14, Method: Composition-based stats.
Identities = 51/249 (20%), Positives = 107/249 (42%), Gaps = 12/249 (4%)
Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
++ K A I FS++V L ++ + +YE A L +++A
Sbjct: 4 KIGKRAFAIVFSVSVLSLGACSSAPDQEDI--QRVPNKSAHALYEDAKETLDSGLYARAI 61
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL- 136
E + +PF +++ + + Y +G +QA + + +I P K++DY+YY+
Sbjct: 62 ELLSAIDSRYPFGPFSKQVQMDLVYAHYQSGNTEQALATIDRFIRLNPNHKDLDYMYYMR 121
Query: 137 ---------VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
+ D T++ +S +V+R+ S Y A+ + N
Sbjct: 122 GLVNIKADKNAFQEYFGVDRADRDANRTRVAFTDLSTLVKRFPKSDYAPEAKRRLVWLLN 181
Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
++A E+++ YY +R Y+AA R + V+ +YS + + + A+ + ++Y L L + +
Sbjct: 182 RMARYELKVATYYYEREAYLAAANRGKFVVEHYSQSSYLDPALEMMEKSYDQLGLTELSE 241
Query: 248 EVVSLIQER 256
+
Sbjct: 242 HAKQTRKLN 250
>gi|152997614|ref|YP_001342449.1| competence lipoprotein ComL [Marinomonas sp. MWYL1]
gi|150838538|gb|ABR72514.1| competence lipoprotein ComL, putative [Marinomonas sp. MWYL1]
Length = 280
Score = 81.8 bits (199), Expect = 9e-14, Method: Composition-based stats.
Identities = 61/258 (23%), Positives = 113/258 (43%), Gaps = 21/258 (8%)
Query: 16 AYQ-LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFS 74
Y L +F+ + FS+ F+V + R+ +R Y+KA LKE +
Sbjct: 3 FYNSLLRFSGIVSFSL---FIVACSSKQVRE-------PDLPERVYYDKAQQALKENLPT 52
Query: 75 KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
A ++ +PF + ++ L + Q A + A + E +I +PE +VDY Y
Sbjct: 53 TAIKHLKDLDSRYPFGEFSTRAELDLIYAQMEASDFIAAHASAERFIKNHPEHDSVDYAY 112
Query: 135 YLVG----------MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184
Y+ MS + D + ++ R+ S Y A+ +
Sbjct: 113 YMRALSTYKGAESLMSRYLNLDPSERDSKELAKAFNELADFTSRFPESTYAPDAKARMYY 172
Query: 185 GRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244
R +A E+++ RYYLKR ++A+ R Q V+ +Y EEA+A +++Y L D
Sbjct: 173 LREMVARHELQVARYYLKRKAPLSALRRSQEVIQHYPSTRSVEEALAISIQSYNDLKQTD 232
Query: 245 EAREVVSLIQERYPQGYW 262
A+ ++++++ +P +
Sbjct: 233 LAQTNLAVLKQNFPHTSY 250
>gi|126666671|ref|ZP_01737648.1| DNA uptake lipoprotein [Marinobacter sp. ELB17]
gi|126628716|gb|EAZ99336.1| DNA uptake lipoprotein [Marinobacter sp. ELB17]
Length = 265
Score = 81.8 bits (199), Expect = 9e-14, Method: Composition-based stats.
Identities = 50/239 (20%), Positives = 100/239 (41%), Gaps = 18/239 (7%)
Query: 32 VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91
V + V ++ YE A + NF++A + +PF
Sbjct: 2 VVLFSACASNTQEQV--------LPEQTYYENARSAMNSGNFNEAETNLDALETYYPFGR 53
Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151
A ++ L F +Y + A + + ++ P+S++ DY ++ G++ + +
Sbjct: 54 YAEQAQLDLIFARYQNLDLEGARAAADRFLRLNPQSEHGDYALFMRGLASYNLDIGLAAR 113
Query: 152 QRATK----------LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
+ + S ++ RY +S Y AR + RN++A E+ RYY+
Sbjct: 114 YFPIEANARAPGEQLQAFRDFSELLNRYPDSLYAADARQRMIAVRNRMAELELHAARYYI 173
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
R Y+AA R + V+ NY + EEA+ L E + L + +++ ++L++ +P
Sbjct: 174 TREAYIAANNRARYVVENYPSSPVVEEAIIILAETFRFLDIKKGSQDAIALLRTNFPDS 232
>gi|297183635|gb|ADI19761.1| hypothetical protein [uncultured gamma proteobacterium EB000_37F04]
Length = 256
Score = 81.8 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 55/210 (26%), Positives = 95/210 (45%), Gaps = 10/210 (4%)
Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
+Y +A LK +NFS A +PF A ++ L + YSA ++ A +
Sbjct: 1 MYREAQRHLKNENFSLAVRSLQGLESRYPFGQYAEQAQLELIYAHYSAYEFAAANEAADR 60
Query: 120 YITQYPESKNVDYVYYLV----------GMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
+I +P +VDY YY+ S D D + ++++ R+
Sbjct: 61 FIRLHPRHPSVDYAYYMKGLAAYDIEPGFFSRFIPSDDTKRDVSHIQTAFAEFAQLLARF 120
Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
+S Y AR + RN LA E+ + YY +RG Y+AA+ R + V+ + +
Sbjct: 121 PDSAYAPDARQRMVHMRNMLARNEIHVANYYFRRGAYMAALNRGKYVVEHMQQTPSVADG 180
Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQ 259
+A + +AY+ L L D A + ++++ E YP
Sbjct: 181 LAIMGQAYLLLGLNDLAEDSIAVLCENYPD 210
>gi|163802428|ref|ZP_02196321.1| NTPase [Vibrio sp. AND4]
gi|159173729|gb|EDP58544.1| NTPase [Vibrio sp. AND4]
Length = 242
Score = 81.8 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 53/242 (21%), Positives = 100/242 (41%), Gaps = 17/242 (7%)
Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
T+ +AV L G + + + E+Y A L+ N+ A E
Sbjct: 5 TLIGLLAVSLLFGCASK-------EEIVPDVPPSELYADAQTSLQSGNWLSAIEKLEALD 57
Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
+PF + + L + Y + ++ P + +D+V Y+ G+S+
Sbjct: 58 SRYPFGAYSEQVQLDLIYAYYKNDDLALGLATISRFMRLNPTHEKMDWVLYMRGLSHMAQ 117
Query: 145 IRDVPYD----------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
R+ +D K +++ERY +SPY + ++ + +N+LA ++
Sbjct: 118 DRNFMHDLFNVDRSDRDPEPVKKAFGDFKKLLERYPSSPYAEDSQRRMVALKNRLANYDL 177
Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
+YL+R ++AAI R Q + + D E A +++ +EAY L L D +LI+
Sbjct: 178 ATADFYLRREAWIAAINRSQELQKAFPDTEAARKSLEIQLEAYKQLKLDDAVARTEALIK 237
Query: 255 ER 256
Sbjct: 238 LN 239
>gi|148827315|ref|YP_001292068.1| hypothetical protein CGSHiGG_03480 [Haemophilus influenzae PittGG]
gi|148718557|gb|ABQ99684.1| conserved hypothetical lipoprotein [Haemophilus influenzae PittGG]
Length = 262
Score = 81.8 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 50/231 (21%), Positives = 90/231 (38%), Gaps = 17/231 (7%)
Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
+G S + E+Y K L+E ++S+A Y + FP + +
Sbjct: 17 IGCSSGSKD-------VEQASVNELYTKGTTSLQEGSYSEAIRYLKATTERFPGSIYQEQ 69
Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL----------VGMSYAQMI 145
++L + Y Y Q + ++ Q+P+S N Y Y+ + I
Sbjct: 70 AMLDLIYANYKTQDYTQVLLTVDSFLHQFPQSPNQAYAVYMAGLTNAATGDNVIQDFFGI 129
Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
+ + + +V + NSPY + A + ++ LA E+EI ++Y KR
Sbjct: 130 DRATRETTSMRTAFSNFQNLVRAFPNSPYSQDALARMAYIKDALARHELEIAKFYTKRKA 189
Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
+VA R +L Y D + E + + EAY + L A + +I
Sbjct: 190 WVAVANRVVGMLKQYPDTKATYEGLFLMQEAYEKMGLTALANDTQKIIDAN 240
>gi|88657674|ref|YP_507792.1| putative competence protein ComL [Ehrlichia chaffeensis str.
Arkansas]
gi|88599131|gb|ABD44600.1| putative competence protein ComL [Ehrlichia chaffeensis str.
Arkansas]
Length = 250
Score = 81.8 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 72/245 (29%), Positives = 125/245 (51%), Gaps = 3/245 (1%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
K + + CFL+ + + + R E+YE A+ + + A +
Sbjct: 5 KIIRKAVYLLCCCFLMVNCSFIKKG---EKFVEDRTADEMYESALKKSNAKEYKSAVKDL 61
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
+ +PF+ VA K+ LM +F+ Y G Y +A ++YI YP+SK++D+ YYL M+
Sbjct: 62 EEIDNLYPFSPVAIKARLMMSFLNYELGDYSRAEIYADDYIQLYPDSKDIDFAYYLRIMA 121
Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
I D+ DQ + +L+ ++ + + NS Y++ + + +A KE IG++Y
Sbjct: 122 NYMQISDIDRDQSSVHKVLELLNEFIRLFPNSMYLEEVMKRLELVHQHIAGKEFSIGKFY 181
Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
L+RGEYVAAI RF +L Y D ++ E++ R+ EAY+AL + +SL++E
Sbjct: 182 LQRGEYVAAIKRFSTILNKYKDTKYYSESLYRIAEAYLALGDIAAYARYMSLLKECCIDT 241
Query: 261 YWARY 265
W +
Sbjct: 242 GWYKE 246
>gi|292487318|ref|YP_003530190.1| hypothetical protein EAMY_0832 [Erwinia amylovora CFBP1430]
gi|292900316|ref|YP_003539685.1| lipoprotein [Erwinia amylovora ATCC 49946]
gi|291200164|emb|CBJ47290.1| putative lipoprotein [Erwinia amylovora ATCC 49946]
gi|291552737|emb|CBA19782.1| UPF0169 lipoprotein PD_1756 precursor [Erwinia amylovora CFBP1430]
Length = 243
Score = 81.4 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 50/230 (21%), Positives = 87/230 (37%), Gaps = 17/230 (7%)
Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
G E+Y A L++ NF A +PF +++
Sbjct: 19 GCSGSRD-------GVPDSPPSEIYATAQQKLQDGNFKGAITQLEALDNRYPFGPYSQQV 71
Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR---------- 146
L + Y A + + ++ P N+DYV Y+ G++ +
Sbjct: 72 QLDLIYAYYKNADLPLAQAAIDRFMRLNPTHPNIDYVIYMRGLTDMALDDSALQGFFGID 131
Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
D + + S+++ Y NS Y AR + + +LA E+ + +Y KRG Y
Sbjct: 132 RSDRDPTHARDAFKDFSQLLRGYPNSQYATDARKRLVFLKERLAKHELSVTEFYTKRGAY 191
Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
VA + R + +L +Y D +A+ + AY L L +A V +I
Sbjct: 192 VAVVNRVEQMLKDYPDTRATRKALPLMENAYRQLQLNAQAERVAKIIAAN 241
>gi|145631296|ref|ZP_01787068.1| conserved hypothetical lipoprotein [Haemophilus influenzae R3021]
gi|144983081|gb|EDJ90581.1| conserved hypothetical lipoprotein [Haemophilus influenzae R3021]
Length = 262
Score = 81.4 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 50/231 (21%), Positives = 91/231 (39%), Gaps = 17/231 (7%)
Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
+G S + E+Y K L+E ++S+A Y + FP + +
Sbjct: 17 IGCSSGSKD-------VEQASVNELYTKGTTSLQEGSYSEAIRYLKATTERFPGSVYQEQ 69
Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL----------VGMSYAQMI 145
++L + Y Y Q + + ++ Q+P+S N Y Y+ + I
Sbjct: 70 AMLDLIYANYKTQDYTQVLLMVDSFLHQFPQSPNQAYAVYMAGLTNAATGDNFIQDFFGI 129
Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
+ + + +V + NSPY + A + ++ LA E+EI ++Y KR
Sbjct: 130 DRATRETTSMRTAFSNFQNLVRVFPNSPYSQDALARMAYIKDALARHELEIAKFYAKRKA 189
Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
+VA R +L Y D + E + + EAY + L A + +I
Sbjct: 190 WVAVANRVVGMLQQYPDTKATYEGLFLMQEAYEKMGLTALANDTQKIIDAN 240
>gi|311278475|ref|YP_003940706.1| outer membrane assembly lipoprotein YfiO [Enterobacter cloacae
SCF1]
gi|308747670|gb|ADO47422.1| outer membrane assembly lipoprotein YfiO [Enterobacter cloacae
SCF1]
Length = 245
Score = 81.4 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 44/230 (19%), Positives = 89/230 (38%), Gaps = 17/230 (7%)
Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
G E+Y A L++ N+ +A +PF +++
Sbjct: 19 GCSGSKEE-------VPDNPPNEIYATAQQKLQDGNWKQAITQLEALDNRYPFGPYSQQV 71
Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR---------- 146
L + Y A + + ++ P N+DYV Y+ G++ +
Sbjct: 72 QLDLIYAYYKNADLPLAQAAIDRFMRLNPTHPNIDYVIYMRGLTNMALDDSALQGFFGVD 131
Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
D + + +++V Y S Y A + +++LA E+ + YY RG +
Sbjct: 132 RSDRDPQHARDAFNDFTKLVRGYPQSQYATDAYKRMVFLKDRLAKYELSVVDYYTDRGAW 191
Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
VA + R + +L +Y D + +A+ ++ AY + + +A +V +I
Sbjct: 192 VAVVNRVEGMLRDYPDTQATRDALPKMENAYRQMQMNAQADKVAKIIAAN 241
>gi|116622298|ref|YP_824454.1| DNA uptake lipoprotein-like protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116225460|gb|ABJ84169.1| DNA uptake lipoprotein-like protein [Candidatus Solibacter usitatus
Ellin6076]
Length = 478
Score = 81.4 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 46/255 (18%), Positives = 97/255 (38%), Gaps = 5/255 (1%)
Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
F T L G + + + + + +++KA+ ++ F A
Sbjct: 6 FRFTAAMVAVAVLLSGCGIRRKKYDNPITKDTQQPDKVLFDKAINDIEHSRFEIARLLLQ 65
Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQ---QAASLGEEYITQYPESKNVDYVYYLVG 138
+ + K+ L A + G QA + +++I YP + V
Sbjct: 66 NLINTYDTSEYLAKAKLAIADAWFREGGAHGLAQAEAEYKDFILFYPAMEEAAEAQEKVC 125
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
+ + + D + L Q +++ ++ NS + A+ + + LA E +G
Sbjct: 126 DIHYKQMDKADRDPKHALLAEQECKQLILQFPNSKFAPLAQQKLRDIQEVLADSEFRVGT 185
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE--VVSLIQER 256
Y K+G + AA RFQ + ++ A+EA+ +L ++Y + E+++ I +
Sbjct: 186 LYQKKGSFPAASNRFQALADHFPLYSKADEALWQLADSYHRMGDRFESQQVTAYQRIVKD 245
Query: 257 YPQGYWARYVETLVK 271
YP A ++
Sbjct: 246 YPLSIHAEDARAQLE 260
>gi|260582392|ref|ZP_05850184.1| pyruvate formate lyase-activating enzyme 1 [Haemophilus influenzae
NT127]
gi|260094543|gb|EEW78439.1| pyruvate formate lyase-activating enzyme 1 [Haemophilus influenzae
NT127]
gi|301168828|emb|CBW28419.1| predicted lipoprotein [Haemophilus influenzae 10810]
Length = 262
Score = 81.4 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 50/231 (21%), Positives = 91/231 (39%), Gaps = 17/231 (7%)
Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
+G S + E+Y K L+E ++S+A Y + FP + +
Sbjct: 17 IGCSSGSKD-------VEQASVNELYTKGTTSLQEGSYSEAIRYLKATTERFPGSVYQEQ 69
Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL----------VGMSYAQMI 145
++L + Y Y Q + + ++ Q+P+S N Y Y+ + I
Sbjct: 70 AMLDLIYANYKTQDYTQVLLMVDSFLHQFPQSPNQAYAVYMAGLTNAATGDNFIQDFFGI 129
Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
+ + + +V + NSPY + A + ++ LA E+EI ++Y KR
Sbjct: 130 DRATRETTSMRTAFSNFQNLVRVFPNSPYSQDALARMAYIKDALARHELEIAKFYAKRKA 189
Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
+VA R +L Y D + E + + EAY + L A + +I
Sbjct: 190 WVAVANRVVGMLKQYPDTKATYEGLFLMQEAYEKMGLTALANDTQKIIDAN 240
>gi|270264066|ref|ZP_06192334.1| hypothetical protein SOD_f02840 [Serratia odorifera 4Rx13]
gi|270042259|gb|EFA15355.1| hypothetical protein SOD_f02840 [Serratia odorifera 4Rx13]
Length = 243
Score = 81.0 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 50/230 (21%), Positives = 91/230 (39%), Gaps = 17/230 (7%)
Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
G E+Y A L++ NF A +PF +++
Sbjct: 19 GCSTSKD-------AVPDNPPSEIYATAQQKLQDGNFKGAITQLEALDNRYPFGPYSQQV 71
Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR---------- 146
L + Y + A + + ++ P N+DYV Y+ G++ +
Sbjct: 72 QLDLIYAYYKSADLPLAQASIDRFMRLNPTHPNIDYVMYMRGLTDMALDDSALQGFFGVD 131
Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
D + + + S+++++Y S YV A + +++LA E+ + YY KRG Y
Sbjct: 132 RSDRDPQHARAAFRDFSQLIQQYPTSQYVTDANKRLVYLKDRLAKYELSVVEYYTKRGAY 191
Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
VA + R +L Y D + +A+ + AY L L +A +V +I
Sbjct: 192 VAVVNRADQMLREYPDTQATRDALPLMENAYKQLQLNGQADKVAKVIAAN 241
>gi|300718036|ref|YP_003742839.1| outer membrane assembly lipoprotein [Erwinia billingiae Eb661]
gi|299063872|emb|CAX60992.1| outer membrane assembly lipoprotein [Erwinia billingiae Eb661]
Length = 243
Score = 81.0 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 50/230 (21%), Positives = 88/230 (38%), Gaps = 17/230 (7%)
Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
G E+Y A L++ NF A +PF +++
Sbjct: 19 GCSGS-------KETVPDNPPSEIYATAQQKLQDGNFKGAITQLEALDNRYPFGPYSQQV 71
Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR---------- 146
L + Y A + + ++ P N+DYV Y+ G++ +
Sbjct: 72 QLDLIYAYYKNADLPLAQAAIDRFMRLNPTHPNIDYVIYMRGLTDMALDDSALQGFFGID 131
Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
D + S+++ Y NS Y AR + +++LA E+ + ++Y KR Y
Sbjct: 132 RSDRDPTHARDAFHDFSQLLRGYPNSQYATDARKRLVYLKDRLAKYELSVAQFYTKREAY 191
Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
VA + R + ++ +Y D + A+ + AY L L EA +V LI
Sbjct: 192 VAVVNRVEQMMKDYPDTQATRTALPLMENAYRQLQLNAEADKVAKLIAAN 241
>gi|68248782|ref|YP_247894.1| hypothetical protein NTHI0266 [Haemophilus influenzae 86-028NP]
gi|68056981|gb|AAX87234.1| conserved hypothetical lipoprotein [Haemophilus influenzae
86-028NP]
Length = 262
Score = 81.0 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 50/231 (21%), Positives = 91/231 (39%), Gaps = 17/231 (7%)
Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
+G S + E+Y K L+E ++S+A Y + FP + +
Sbjct: 17 IGCSSGSKD-------VEQASVNELYTKGTTSLQEGSYSEAIRYLKATTERFPGSVYQEQ 69
Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL----------VGMSYAQMI 145
++L + Y Y Q + + ++ Q+P+S N Y Y+ + I
Sbjct: 70 AMLDLIYANYKTQDYTQVLLMVDSFLHQFPQSPNQAYAVYMAGLTNAATGDNFIQDFFGI 129
Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
+ + + +V + NSPY + A + ++ LA E+EI ++Y KR
Sbjct: 130 DRATRETTSMRTAFSNFQNLVRVFPNSPYAQDALARMAYIKDALARHELEIAKFYAKRKA 189
Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
+VA R +L Y D + E + + EAY + L A + +I
Sbjct: 190 WVAVANRVVGMLKQYPDTKATYEGLFLMQEAYEKMGLTALANDTQKIIDAN 240
>gi|293392745|ref|ZP_06637063.1| competence lipoprotein ComL [Serratia odorifera DSM 4582]
gi|291424604|gb|EFE97815.1| competence lipoprotein ComL [Serratia odorifera DSM 4582]
Length = 243
Score = 81.0 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 47/230 (20%), Positives = 93/230 (40%), Gaps = 17/230 (7%)
Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
G E+Y A L++ NF A +PF +++
Sbjct: 19 GCSSSKD-------AVPDNPPSEIYANAQQKLQDGNFKGAITQLEALDNRYPFGPYSQQV 71
Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR---------- 146
L + Y + A + + ++ P N+DYV Y+ G++ +
Sbjct: 72 QLDLIYAYYKSADLPLAQASIDRFMRLNPTHPNIDYVMYMRGLTDMALDDSALQGFFGVD 131
Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
D + + + S+++++Y +S Y A+ + +++L+ E+ + YY KRG Y
Sbjct: 132 RSDRDPQHARAAFRDFSQLIQQYPSSQYTPDAQKRLVYLKDRLSKYELSVAEYYTKRGAY 191
Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
VA + R + ++ Y D + +A+ + AY L L +A +V +I
Sbjct: 192 VAVVNRVEQMMREYPDTKATRDALPLMENAYKQLQLNGQADKVAKIIAAN 241
>gi|188534768|ref|YP_001908565.1| outer membrane protein assembly complex subunit YfiO [Erwinia
tasmaniensis Et1/99]
gi|188029810|emb|CAO97691.1| Conserved hypothetical protein [Erwinia tasmaniensis Et1/99]
Length = 243
Score = 81.0 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 50/230 (21%), Positives = 89/230 (38%), Gaps = 17/230 (7%)
Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
G V E+Y A L++ NF A +PF +++
Sbjct: 19 GCSGSKD-------VVPDSPPSEIYATAQQKLQDGNFKGAITQLEALDNRYPFGPYSQQV 71
Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR---------- 146
L + Y A + + ++ P N+DYV Y+ G++ +
Sbjct: 72 QLDLIYAYYKNADLPLAQAAIDRFMRLNPTHPNIDYVIYMRGLTDMALDDSALQGFFGID 131
Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
D + + S+++ Y NS Y A + +++LA E+ + +Y KRG Y
Sbjct: 132 RSDRDPTHARDAFKDFSQLLRGYPNSQYATDAHKRLVFLKDRLAKYELSVVEFYTKRGAY 191
Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
VA + R + +L +Y D + +A+ + AY L L +A V +I
Sbjct: 192 VAVVNRVEQMLKDYPDTQATHKALPLMENAYRQLQLNSQAERVAKIIAAN 241
>gi|312171424|emb|CBX79683.1| UPF0169 lipoprotein PD_1756 precursor [Erwinia amylovora ATCC
BAA-2158]
Length = 243
Score = 81.0 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 49/230 (21%), Positives = 86/230 (37%), Gaps = 17/230 (7%)
Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
G E+Y A L++ NF A +PF +++
Sbjct: 19 GCSGSRD-------GVPDSPPSEIYATAQQKLQDGNFKGAITQLEALDNRYPFGPYSQQV 71
Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR---------- 146
L + Y A + + ++ P N+DYV Y+ G++ +
Sbjct: 72 QLDLIYAYYKNADLPLAQAAIDRFMRLNPTHPNIDYVIYMRGLTDMALDDSALQGFFGID 131
Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
D + + S+++ Y NS Y AR + + +LA E+ + +Y RG Y
Sbjct: 132 RSDRDPTHARDAFKDFSQLLRGYPNSQYATDARKRLVFLKERLAKHELSVTEFYTNRGAY 191
Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
VA + R + +L +Y D +A+ + AY L L +A V +I
Sbjct: 192 VAVVNRVEQMLKDYPDTRATRKALPLMENAYRQLQLNAQAERVAKIIAAN 241
>gi|145628475|ref|ZP_01784275.1| conserved hypothetical lipoprotein [Haemophilus influenzae 22.1-21]
gi|145639767|ref|ZP_01795369.1| pyruvate formate lyase-activating enzyme 1 [Haemophilus influenzae
PittII]
gi|144978945|gb|EDJ88631.1| conserved hypothetical lipoprotein [Haemophilus influenzae 22.1-21]
gi|145271135|gb|EDK11050.1| pyruvate formate lyase-activating enzyme 1 [Haemophilus influenzae
PittII]
gi|309750407|gb|ADO80391.1| Probable outer membrane protein assembly complex subunit BamD
[Haemophilus influenzae R2866]
Length = 262
Score = 81.0 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 50/231 (21%), Positives = 91/231 (39%), Gaps = 17/231 (7%)
Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
+G S + E+Y K L+E ++S+A Y + FP + +
Sbjct: 17 IGCSSGSKD-------VEQASVNELYTKGTTSLQEGSYSEAIRYLKATTERFPGSVYQEQ 69
Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL----------VGMSYAQMI 145
++L + Y Y Q + + ++ Q+P+S N Y Y+ + I
Sbjct: 70 AMLDLIYANYKTQDYTQVLLMVDSFLHQFPQSPNQAYAVYMAGLTNAATGDNFIQDFFGI 129
Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
+ + + +V + NSPY + A + ++ LA E+EI ++Y KR
Sbjct: 130 DRATRETTSMRTAFSNFQNLVRVFPNSPYSQDALARMAYIKDALARHELEIAKFYAKRKA 189
Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
+VA R +L Y D + E + + EAY + L A + +I
Sbjct: 190 WVAVANRVVGMLKQYPDTKATYEGLFLMQEAYEKMGLTALANDTQKIIDAN 240
>gi|145633598|ref|ZP_01789326.1| pyruvate formate lyase-activating enzyme 1 [Haemophilus influenzae
3655]
gi|145637337|ref|ZP_01792997.1| conserved hypothetical lipoprotein [Haemophilus influenzae PittHH]
gi|148825562|ref|YP_001290315.1| hypothetical protein CGSHiEE_02415 [Haemophilus influenzae PittEE]
gi|229845162|ref|ZP_04465296.1| conserved hypothetical lipoprotein [Haemophilus influenzae 6P18H1]
gi|229847287|ref|ZP_04467390.1| conserved hypothetical lipoprotein [Haemophilus influenzae 7P49H1]
gi|144985804|gb|EDJ92418.1| pyruvate formate lyase-activating enzyme 1 [Haemophilus influenzae
3655]
gi|145269429|gb|EDK09372.1| conserved hypothetical lipoprotein [Haemophilus influenzae PittHH]
gi|148715722|gb|ABQ97932.1| conserved hypothetical lipoprotein [Haemophilus influenzae PittEE]
gi|229809830|gb|EEP45553.1| conserved hypothetical lipoprotein [Haemophilus influenzae 7P49H1]
gi|229811873|gb|EEP47568.1| conserved hypothetical lipoprotein [Haemophilus influenzae 6P18H1]
gi|309972702|gb|ADO95903.1| Probable outer membrane protein assembly complex subunit BamD
[Haemophilus influenzae R2846]
Length = 262
Score = 81.0 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 50/231 (21%), Positives = 91/231 (39%), Gaps = 17/231 (7%)
Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
+G S + E+Y K L+E ++S+A Y + FP + +
Sbjct: 17 IGCSSGSKD-------VEQASVNELYTKGTTSLQEGSYSEAIRYLKATTERFPGSVYQEQ 69
Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL----------VGMSYAQMI 145
++L + Y Y Q + + ++ Q+P+S N Y Y+ + I
Sbjct: 70 AMLDLIYANYKTQDYTQVLLMVDSFLHQFPQSPNQAYAVYMAGLTNAATGDNFIQDFFGI 129
Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
+ + + +V + NSPY + A + ++ LA E+EI ++Y KR
Sbjct: 130 DRATRETTSMRTAFSNFQNLVRVFPNSPYSQDALARMAYIKDALARHELEIAKFYAKRKA 189
Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
+VA R +L Y D + E + + EAY + L A + +I
Sbjct: 190 WVAVANRVVGMLKQYPDTKATYEGLFLMQEAYEKMGLTALANDTQKIIDAN 240
>gi|33151687|ref|NP_873040.1| putative lipoprotein [Haemophilus ducreyi 35000HP]
gi|18203223|sp|Q9L7A6|Y470_HAEDU RecName: Full=UPF0169 lipoprotein HD_0470; Flags: Precursor
gi|6942293|gb|AAF32395.1|AF224466_2 hypothetical lipoprotein [Haemophilus ducreyi]
gi|33147908|gb|AAP95429.1| conserved putative lipoprotein [Haemophilus ducreyi 35000HP]
Length = 260
Score = 81.0 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 54/249 (21%), Positives = 102/249 (40%), Gaps = 17/249 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K + +A ++G Q+ + + + +Y +A L++ +++ A
Sbjct: 1 MRKLNSLVSLVLAGLLVIGCSNQNQTEQEI------LSAQALYTQAQTQLEKGDYASAIA 54
Query: 79 YFNQCSRDFPFAG-VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY-- 135
F + A + L F Y G+Y +A SL E ++ YP S N+DYV+Y
Sbjct: 55 SFEKMGSRNVQANLFGEQIQLSLIFAHYKTGEYYKALSLAERFVRAYPNSNNMDYVHYLV 114
Query: 136 --------LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
+ + + + IV Y S YV A+ ++ N
Sbjct: 115 GLSNVRLGDNFIQDFFHVNRSSRTIESIRNAYGNFQMIVRIYPQSQYVNDAQQWMVYLLN 174
Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
++A E+ I ++Y KR VA + R + +L Y ++ +A+ + +AY + L D
Sbjct: 175 RMAEHELSIVKFYDKRDASVAVVNRVEEMLRFYPASKSTFDALPYMQKAYQRMGLKDSEA 234
Query: 248 EVVSLIQER 256
+V LI+
Sbjct: 235 KVAELIEMN 243
>gi|16272142|ref|NP_438345.1| hypothetical protein HI0177 [Haemophilus influenzae Rd KW20]
gi|260580942|ref|ZP_05848766.1| conserved hypothetical protein [Haemophilus influenzae RdAW]
gi|1175182|sp|P44553|Y177_HAEIN RecName: Full=Putative UPF0169 lipoprotein HI_0177; Flags:
Precursor
gi|1573134|gb|AAC21847.1| lipoprotein, putative [Haemophilus influenzae Rd KW20]
gi|260092431|gb|EEW76370.1| conserved hypothetical protein [Haemophilus influenzae RdAW]
Length = 262
Score = 81.0 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 49/231 (21%), Positives = 90/231 (38%), Gaps = 17/231 (7%)
Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
+G S + E+Y K L+E ++S+A Y + FP + +
Sbjct: 17 IGCSSGSKD-------VEQASVNELYTKGTTSLQEGSYSEAIRYLKATTERFPGSVYQEQ 69
Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL----------VGMSYAQMI 145
++L + Y Y Q + + ++ Q+ +S N Y Y+ + I
Sbjct: 70 AMLDLIYANYKTQDYTQVLLMVDSFLHQFTQSPNQAYAVYMAGLTNAATGDNFIQDFFGI 129
Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
+ + + +V + NSPY + A + ++ LA E+EI ++Y KR
Sbjct: 130 DRATRETTSMRTAFSNFQNLVRVFPNSPYSQDALARMAYIKDALARHELEIAKFYAKRKA 189
Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
+VA R +L Y D + E + + EAY + L A + +I
Sbjct: 190 WVAVANRVVGMLKQYPDTKATYEGLFLMQEAYEKMGLTALANDTQKIIDAN 240
>gi|323143513|ref|ZP_08078193.1| outer membrane assembly lipoprotein YfiO [Succinatimonas hippei YIT
12066]
gi|322416707|gb|EFY07361.1| outer membrane assembly lipoprotein YfiO [Succinatimonas hippei YIT
12066]
Length = 264
Score = 80.6 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 54/249 (21%), Positives = 99/249 (39%), Gaps = 15/249 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ KF L + A L + + ++ +Y A + +F +A +
Sbjct: 12 MIKFFLPLIVG-AAVALTACSSANYNKDEVPNIA----PDAMYSVAQNAMASGDFQRAKQ 66
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
Y +PF +A + L +V Y ++ ++ ++ P S+ DYV Y+ G
Sbjct: 67 YLEAIDSRYPFGELADQVQLDLIYVYYKMRDSEKTSAQINRFMRLNPTSQYTDYVMYMTG 126
Query: 139 MSYAQMI----------RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
++ QM D L+ ++E Y S Y A + + Q
Sbjct: 127 LNQIQMRSDILQDFIGLNRSQKDPTQYYEALKTFRNLIETYPESKYAADAHQRMIFIKQQ 186
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
LA +E+ I YY +RG Y++ I Q +L +Y ++ E A+A + Y L L + A
Sbjct: 187 LAEREMAIANYYYERGSYLSTIRHCQNILYSYRGTQYLEPALALMARCYDDLGLPEAAAN 246
Query: 249 VVSLIQERY 257
S+ + +
Sbjct: 247 ARSVQEASF 255
>gi|50122270|ref|YP_051437.1| outer membrane protein assembly complex subunit YfiO
[Pectobacterium atrosepticum SCRI1043]
gi|49612796|emb|CAG76246.1| putative lipoprotein [Pectobacterium atrosepticum SCRI1043]
Length = 244
Score = 80.6 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 52/230 (22%), Positives = 94/230 (40%), Gaps = 16/230 (6%)
Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
G S E+Y A L++ NF A +PF +++
Sbjct: 19 GCSSNSKD------AVPDSPPSEIYANAQQKLQDGNFKAAITQLEALDNRYPFGPYSQQV 72
Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR---------- 146
L + Y + + A + + ++ P NVDYV Y+ G++ +
Sbjct: 73 QLDLIYAYYKSAELPLAQASIDRFLRLNPTHPNVDYVLYMRGLTDMALDDSALQGFFGVD 132
Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
D + + + S++++ Y NS Y A + + +LA E+ + +YY KRG Y
Sbjct: 133 RSDRDPQYARTAFRDFSKLIQGYPNSQYATDANKRLVYLKERLAKYELSVAQYYTKRGAY 192
Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
VA + R + +L +Y D + + A+ + AY L L +A +V +I
Sbjct: 193 VAVVNRVEQMLRDYPDTQATKNALPLMESAYRELQLAAQADKVAKVIAAN 242
>gi|327399434|ref|YP_004340303.1| outer membrane assembly lipoprotein YfiO [Hippea maritima DSM
10411]
gi|327182063|gb|AEA34244.1| outer membrane assembly lipoprotein YfiO [Hippea maritima DSM
10411]
Length = 251
Score = 80.6 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 44/250 (17%), Positives = 98/250 (39%), Gaps = 4/250 (1%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
I L G + + + E Y + + ++S+A
Sbjct: 1 MKKTIALLGICAIALAGCSSHKK----IIPKEEEKPAYEWYNEGIQDYINHDYSEAEHAL 56
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
+ P + A+++ + V ++ G+Y A ++I YP SK Y Y + +S
Sbjct: 57 TMINAQHPGSIYAKRATIALGDVYFAKGEYILARDYYRKFIKLYPNSKEAVYAKYHIALS 116
Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
+ + D + ++ ++++Y N+PY +Y+T +L E+ + ++Y
Sbjct: 117 FYKARNGYKCDATPVREAIKEFLDLLDKYPNNPYKDKIYYYITKSVEELYKHELFVAKFY 176
Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
E+ AA R + ++ + +E + L + Y L +A+E + ++YP
Sbjct: 177 ADLDEFNAAKNRLNYMYKHFKNVNFNDEMLFLLGKVYYHLGKKQQAKEFFKELIKKYPNS 236
Query: 261 YWARYVETLV 270
+A + +
Sbjct: 237 DYAGKAKEFI 246
>gi|156932862|ref|YP_001436778.1| outer membrane protein assembly complex subunit YfiO [Cronobacter
sakazakii ATCC BAA-894]
gi|156531116|gb|ABU75942.1| hypothetical protein ESA_00659 [Cronobacter sakazakii ATCC BAA-894]
Length = 245
Score = 80.6 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 48/230 (20%), Positives = 89/230 (38%), Gaps = 17/230 (7%)
Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
G E+Y A L++ N+ A +PF +++
Sbjct: 19 GCSGSKEE-------VPDNPPSEIYATAQQKLQDGNWKAAITQLEALDNRYPFGPYSQQV 71
Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR---------- 146
L + Y A + + +I P N+DYV Y+ G++ +
Sbjct: 72 QLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVIYMRGLTNMALDDSALQGFFGVD 131
Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
D + + + S++V Y S Y A + +++L+ E+ + +YY KRG +
Sbjct: 132 RSDRDPQHARDAFRDFSKLVRGYPQSQYATDATKRLVYLKDRLSKYELSVAQYYTKRGAW 191
Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
VA + R + +L +Y D + E + + AY L L +A +V +I
Sbjct: 192 VAVVNRVEGMLRDYPDTQATHEGLGLMENAYRELQLNAQADKVAKIIAAN 241
>gi|319775953|ref|YP_004138441.1| lipoprotein [Haemophilus influenzae F3047]
gi|319898142|ref|YP_004136339.1| lipoprotein [Haemophilus influenzae F3031]
gi|317433648|emb|CBY82033.1| predicted lipoprotein [Haemophilus influenzae F3031]
gi|317450544|emb|CBY86761.1| predicted lipoprotein [Haemophilus influenzae F3047]
Length = 262
Score = 80.6 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 51/231 (22%), Positives = 92/231 (39%), Gaps = 17/231 (7%)
Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
+G S + E+Y K L+E ++S+A Y + FP + +
Sbjct: 17 IGCSSGSKD-------VEQASVNELYTKGTTSLQEGSYSEAIRYLKATTERFPGSIYQEQ 69
Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL----------VGMSYAQMI 145
++L + Y A Y Q + + ++ Q+P+S N Y Y+ + I
Sbjct: 70 AMLDLIYANYKAQDYTQVLLMVDSFLHQFPQSPNQAYAVYMAGLTNAATGDNFIQDFFGI 129
Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
+ + + +V + NSPY + A + ++ LA E+EI ++Y KR
Sbjct: 130 DRATRETTSMRTAFSNFQNLVRVFPNSPYSQDALARMAYIKDALARHELEIAKFYAKRKA 189
Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
+VA R +L Y D + E + + EAY + L A + +I
Sbjct: 190 WVAVANRVVGMLKQYPDTKATYEGLFLMQEAYEKMGLTALANDTQKIIDAN 240
>gi|77359879|ref|YP_339454.1| TPR repeat-containing lipoprotein [Pseudoalteromonas haloplanktis
TAC125]
gi|76874790|emb|CAI86011.1| putative lipoprotein with tetratricopeptide repeats (TPR) domain
[Pseudoalteromonas haloplanktis TAC125]
Length = 254
Score = 80.2 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 51/249 (20%), Positives = 106/249 (42%), Gaps = 12/249 (4%)
Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
++ K A I FS++V L ++ + +YE A L +++A
Sbjct: 4 KIGKRAFAIVFSVSVLSLGACSSAPDQEDI--QRVPNKSAHALYEDAKQTLDSGLYARAI 61
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL- 136
E + +PF +++ + + Y +G +QA + + +I P K++DY+YY+
Sbjct: 62 ELLSAIDSRYPFGPFSKQVQMDLVYAHYQSGNTEQALATIDRFIRLNPNHKDLDYMYYMR 121
Query: 137 ---------VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
+ D T++ +S +V+R+ S Y A+ + N
Sbjct: 122 GLVNIKADKNAFQEYFGVDRADRDANRTRVAFTDLSTLVKRFPQSDYAPEAKRRLVWLLN 181
Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
++A E+++ YY +R Y+AA R + V+ +YS + + A+ + ++Y L L + +
Sbjct: 182 RMARYELKVATYYYEREAYLAAANRGKFVVEHYSQSSYLNSALEMMEKSYDKLGLSELSE 241
Query: 248 EVVSLIQER 256
+
Sbjct: 242 DAKQTRIFN 250
>gi|227329205|ref|ZP_03833229.1| outer membrane protein assembly complex subunit YfiO
[Pectobacterium carotovorum subsp. carotovorum WPP14]
Length = 244
Score = 80.2 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 52/230 (22%), Positives = 94/230 (40%), Gaps = 16/230 (6%)
Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
G S E+Y A L++ NF A +PF +++
Sbjct: 19 GCSSNSKD------AVPDSPPSEIYANAQQKLQDGNFKAAITQLEALDNRYPFGPYSQQV 72
Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR---------- 146
L + Y + + A + + ++ P NVDYV Y+ G++ +
Sbjct: 73 QLDLIYAYYKSAELPLAQASIDRFLRLNPTHPNVDYVLYMRGLTDMALDDSALQGFFGVD 132
Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
D + + + S++++ Y NS Y A + + +LA E+ + +YY KRG Y
Sbjct: 133 RSDRDPQYARTAFRDFSKLIQGYPNSQYATDANKRLVYLKERLAKYELSVAQYYTKRGAY 192
Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
VA + R + +L +Y D + + A+ + AY L L +A +V +I
Sbjct: 193 VAVVNRVEQMLRDYPDTQATKTALPLMENAYRELQLAAQADKVAKVIAAN 242
>gi|121604766|ref|YP_982095.1| hypothetical protein Pnap_1864 [Polaromonas naphthalenivorans CJ2]
gi|120593735|gb|ABM37174.1| putative transmembrane protein [Polaromonas naphthalenivorans CJ2]
Length = 274
Score = 80.2 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 59/240 (24%), Positives = 94/240 (39%), Gaps = 15/240 (6%)
Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
G T ++Y +A + KA + + +A++
Sbjct: 27 SGCSS-----TPAPDKTATWSPNKIYAEAKDEAGSGAYDKAIPLYEKLEGRAAGTPLAQQ 81
Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY----------VYYLVGMSYAQMI 145
+ L A+ QY G+ QA + ++ +P S +DY L
Sbjct: 82 AQLDKAYAQYKGGEQAQALATLNRFMKLHPASPAMDYALYLKGLVNFNDNLGIFGSISRQ 141
Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
DQ A K + +V R+ +S Y AR + N LA EV + RYY RG
Sbjct: 142 DLSERDQNAAKESFESFKELVARFPDSRYAPDARLRMNYIVNSLAKSEVHVARYYYSRGA 201
Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
YVAAI R Q +A+Y D EEA L ++Y AL + + ++ ++ + YPQ +
Sbjct: 202 YVAAINRAQSAIADYRDVPALEEATFILYKSYDALGMTELRDDMRRIMDKSYPQSQYMSK 261
>gi|119713311|gb|ABL97375.1| predicted secreted competence lipoprotein [uncultured marine
bacterium EB80_02D08]
Length = 272
Score = 80.2 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 48/247 (19%), Positives = 95/247 (38%), Gaps = 18/247 (7%)
Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
L + I LV + ++ Y++A + +N+ A E
Sbjct: 8 KLFLVVPIVTLLLVSCNSDGPEI--------EQPEKIYYDQAQRRIAAKNYFGAIESLEA 59
Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
+PF + ++ + +VQ+ + + A + E++I +P N+DY Y++ G+S
Sbjct: 60 IETRYPFGKYSEQAQVELIYVQFMNAETEAAHAAAEKFIRLHPRHPNIDYAYFMKGLSSY 119
Query: 143 QMIRDVPYDQRAT----------KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
T K ++ + R+ +S Y A+ RN +A
Sbjct: 120 TRDNSFIVRMTDTDLSNRDISGAKESFSELTEFLTRFPDSQYATYAKQRNIYLRNMIARN 179
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
E+ YY+ ++AAI R V+ N ++ A+ L E+Y +L ++ + +
Sbjct: 180 ELAAADYYVSVDAHIAAIRRANYVIENIPNSSENYRALKILEESYDSLGYVELLEDTRKI 239
Query: 253 IQERYPQ 259
I Y
Sbjct: 240 ITLNYKD 246
>gi|212712903|ref|ZP_03321031.1| hypothetical protein PROVALCAL_04000 [Providencia alcalifaciens DSM
30120]
gi|212684448|gb|EEB43976.1| hypothetical protein PROVALCAL_04000 [Providencia alcalifaciens DSM
30120]
Length = 239
Score = 80.2 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 54/230 (23%), Positives = 98/230 (42%), Gaps = 17/230 (7%)
Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
G + V+ E+Y L++ N++ A + F +PF A++
Sbjct: 16 GCSSN-------NEVSPDSSPAEIYSTGQQKLQDGNYNAAIKQFEALDNRYPFGPYAQQV 68
Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
L + Y + + A + + ++ P N+DYV Y+ G++ + +
Sbjct: 69 QLDLIYAYYKSAELPMAIASIDRFMRLNPTHPNIDYVLYMRGLTAMALDDSMLQGFFGID 128
Query: 157 L----------MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
+ +S++V Y NSPY A + +++LA ++ + YY KRG Y
Sbjct: 129 RSDRDPQHALVAFKDLSQLVRYYPNSPYSNDASKRLVYLKDRLAKFDLSVVEYYNKRGAY 188
Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
VA + R Q +L +Y D E +A+ + AY + L EA +V S+I
Sbjct: 189 VAVVNRVQQMLRDYPDTEATRQALTYMEIAYKEMGLDKEANKVGSIIAAN 238
>gi|227357803|ref|ZP_03842151.1| DNA uptake lipoprotein ComL [Proteus mirabilis ATCC 29906]
gi|227161913|gb|EEI46931.1| DNA uptake lipoprotein ComL [Proteus mirabilis ATCC 29906]
Length = 241
Score = 80.2 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 54/218 (24%), Positives = 95/218 (43%), Gaps = 10/218 (4%)
Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
T E+Y + L + N+ A + +PF +++ L + Y +
Sbjct: 22 KDATADMSPSELYATSQEKLLDGNYGAAIKQLESLDNRYPFGPYSQQVQLDLIYAYYKSA 81
Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR----------DVPYDQRATKLM 158
+ A S + ++ P N+DYV Y+ G++ + D + ++
Sbjct: 82 ELPMAISAIDRFMRLNPTHPNIDYVLYMRGLTAQALDDSALQGFFGIDRSDRDPQHARVA 141
Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
+ S++V Y +S Y A + +N+LA E+ + ++Y KRG YVA I R + ++
Sbjct: 142 FKDFSQLVRYYPDSLYTADATKRLVFLKNRLAKYELSVAKFYTKRGAYVAVINRVEQMMR 201
Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
+Y D E EA+ + AY L L EA +V SLI
Sbjct: 202 DYPDTEATREALVYMENAYKKLGLTQEADKVASLIAAN 239
>gi|212212776|ref|YP_002303712.1| lipoprotein, ComL family [Coxiella burnetii CbuG_Q212]
gi|212011186|gb|ACJ18567.1| lipoprotein, ComL family [Coxiella burnetii CbuG_Q212]
Length = 272
Score = 80.2 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 55/230 (23%), Positives = 95/230 (41%), Gaps = 10/230 (4%)
Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
+DV + E++ L ++++S+A + F +PF A ++ L
Sbjct: 32 SGCVRKDVDPYQAYRGKTSAELFTSGERALAKKDYSEAVKNFEALDAIYPFGPHAEQAQL 91
Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT--- 155
+ Y A + + YI YP +NVDY YY+ G+ +
Sbjct: 92 DIIYAYYKNNDTSSAIAAADRYIWLYPRGRNVDYAYYMRGVIGFDLGLSWLQKLARVSPV 151
Query: 156 -------KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
+ + + E + +S Y A + RN +A +E+ I +Y+KR YVA
Sbjct: 152 SRDISTLQQSFTSFATLAEVFPHSRYTPDALTRMRYIRNLMAQREIMIAEFYMKRRAYVA 211
Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
A R V+ ++ + +A+A +V+AY AL L A L+Q YP
Sbjct: 212 AANRGSYVVQHFQGSPQVAKALAIMVQAYRALGLPKMADVSNHLLQTNYP 261
>gi|197284292|ref|YP_002150164.1| outer membrane protein assembly complex subunit YfiO [Proteus
mirabilis HI4320]
gi|194681779|emb|CAR40993.1| putative lipoprotein [Proteus mirabilis HI4320]
Length = 244
Score = 80.2 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 54/218 (24%), Positives = 95/218 (43%), Gaps = 10/218 (4%)
Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
T E+Y + L + N+ A + +PF +++ L + Y +
Sbjct: 25 KDATADMSPSELYATSQEKLLDGNYGAAIKQLESLDNRYPFGPYSQQVQLDLIYAYYKSA 84
Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR----------DVPYDQRATKLM 158
+ A S + ++ P N+DYV Y+ G++ + D + ++
Sbjct: 85 ELPMAISAIDRFMRLNPTHPNIDYVLYMRGLTAQALDDSALQGFFGIDRSDRDPQHARVA 144
Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
+ S++V Y +S Y A + +N+LA E+ + ++Y KRG YVA I R + ++
Sbjct: 145 FKDFSQLVRYYPDSLYTADATKRLVFLKNRLAKYELSVAKFYTKRGAYVAVINRVEQMMR 204
Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
+Y D E EA+ + AY L L EA +V SLI
Sbjct: 205 DYPDTEATREALVYMENAYKKLGLTQEADKVASLIAAN 242
>gi|209363886|ref|YP_001424166.2| lipoprotein, ComL family [Coxiella burnetii Dugway 5J108-111]
gi|212218243|ref|YP_002305030.1| lipoprotein, ComL family [Coxiella burnetii CbuK_Q154]
gi|207081819|gb|ABS77330.2| lipoprotein, ComL family [Coxiella burnetii Dugway 5J108-111]
gi|212012505|gb|ACJ19885.1| lipoprotein, ComL family [Coxiella burnetii CbuK_Q154]
Length = 272
Score = 80.2 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 55/230 (23%), Positives = 95/230 (41%), Gaps = 10/230 (4%)
Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
+DV + E++ L ++++S+A + F +PF A ++ L
Sbjct: 32 SGCVRKDVDPYQAYRGKTSAELFTSGERALAKKDYSEAVKNFEALDAIYPFGPHAEQAQL 91
Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT--- 155
+ Y A + + YI YP +NVDY YY+ G+ +
Sbjct: 92 DIIYAYYKNNDTSSAIAAADRYIRLYPRGRNVDYAYYMRGVIGFDLGLSWLQKLARVSPV 151
Query: 156 -------KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
+ + + E + +S Y A + RN +A +E+ I +Y+KR YVA
Sbjct: 152 SRDVSTLQQSFTSFATLAEVFPHSRYTPDALTRMRYIRNLMAQREIMIAEFYMKRRAYVA 211
Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
A R V+ ++ + +A+A +V+AY AL L A L+Q YP
Sbjct: 212 AANRGSYVVQHFQGSPQVAKALAIMVQAYRALGLPKMADASNHLLQTNYP 261
>gi|261820450|ref|YP_003258556.1| outer membrane protein assembly complex subunit YfiO
[Pectobacterium wasabiae WPP163]
gi|261604463|gb|ACX86949.1| outer membrane assembly lipoprotein YfiO [Pectobacterium wasabiae
WPP163]
Length = 244
Score = 80.2 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 52/230 (22%), Positives = 94/230 (40%), Gaps = 16/230 (6%)
Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
G S E+Y A L++ NF A +PF +++
Sbjct: 19 GCSGNSKD------AVPDSPPSEIYANAQQKLQDGNFKAAITQLEALDNRYPFGPYSQQV 72
Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR---------- 146
L + Y + + A + + ++ P NVDYV Y+ G++ +
Sbjct: 73 QLDLIYAYYKSAELPLAQASIDRFLRLNPTHPNVDYVLYMRGLTDMALDDSALQGFFGVD 132
Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
D + + + S++++ Y NS Y A + + +LA E+ + +YY KRG Y
Sbjct: 133 RSDRDPQYARTAFRDFSKLIQGYPNSQYATDANKRLVYLKERLAKYELSVAQYYTKRGAY 192
Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
VA + R + +L +Y D + + A+ + AY L L +A +V +I
Sbjct: 193 VAVVNRVEQMLRDYPDTQATKNALPLMESAYRELQLAAQADKVAKVIAAN 242
>gi|329123817|ref|ZP_08252375.1| NrfG protein [Haemophilus aegyptius ATCC 11116]
gi|327469304|gb|EGF14775.1| NrfG protein [Haemophilus aegyptius ATCC 11116]
Length = 272
Score = 80.2 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 51/231 (22%), Positives = 92/231 (39%), Gaps = 17/231 (7%)
Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
+G S + E+Y K L+E ++S+A Y + FP + +
Sbjct: 27 IGCSSGSKD-------VEQASVNELYTKGTTSLQEGSYSEAIRYLKATTERFPGSIYQEQ 79
Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL----------VGMSYAQMI 145
++L + Y A Y Q + + ++ Q+P+S N Y Y+ + I
Sbjct: 80 AMLDLIYANYKAQDYTQVLLMVDSFLHQFPQSPNQAYAVYMAGLTNAATGDNFIQDFFGI 139
Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
+ + + +V + NSPY + A + ++ LA E+EI ++Y KR
Sbjct: 140 DRATRETTSMRTAFSNFQNLVRVFPNSPYSQDALARMAYIKDALARHELEIAKFYAKRKA 199
Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
+VA R +L Y D + E + + EAY + L A + +I
Sbjct: 200 WVAVANRVVGMLKQYPDTKATYEGLFLMQEAYEKMGLTALANDTQKIIDAN 250
>gi|260771764|ref|ZP_05880682.1| probable component of the lipoprotein assembly complex (forms a
complex with YaeT YfgL and NlpB) [Vibrio metschnikovii
CIP 69.14]
gi|260613056|gb|EEX38257.1| probable component of the lipoprotein assembly complex (forms a
complex with YaeT YfgL and NlpB) [Vibrio metschnikovii
CIP 69.14]
Length = 242
Score = 80.2 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 52/231 (22%), Positives = 94/231 (40%), Gaps = 17/231 (7%)
Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
VG + + + E+Y A L+ N+ A + +PF + +
Sbjct: 16 VGCSSK-------EEIVPDVPPAELYSDAQTSLQSGNWLTAIDKLEALDSRYPFGAYSEQ 68
Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD---- 151
L + Y + E +I P + +D+V Y+ G+++ R+ +D
Sbjct: 69 VQLDLIYAYYKNDDLALGLATIERFIRLNPTHEKMDWVLYMRGLTHMAQDRNFMHDLFNI 128
Query: 152 ------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
K R++ERY NS Y A+ + +N+LA ++ +YL+R
Sbjct: 129 DRSDRDPEPVKAAFADFKRLLERYPNSLYANDAQQRMIALKNRLAEYDLATADFYLRREA 188
Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
++AAI R Q + Y E A ++++ ++AY L L D A L+Q
Sbjct: 189 WIAAINRTQELQKTYPGTEAARKSLSIQLKAYQQLGLTDAAERTKQLMQLN 239
>gi|227115224|ref|ZP_03828880.1| outer membrane protein assembly complex subunit YfiO
[Pectobacterium carotovorum subsp. brasiliensis PBR1692]
Length = 244
Score = 80.2 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 52/230 (22%), Positives = 94/230 (40%), Gaps = 16/230 (6%)
Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
G S E+Y A L++ NF A +PF +++
Sbjct: 19 GCSSNSKD------AVPDSPPSEIYANAQQKLQDGNFKAAITQLEALDNRYPFGPYSQQV 72
Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR---------- 146
L + Y + + A + + ++ P NVDYV Y+ G++ +
Sbjct: 73 QLDLIYAYYKSAELPLAQASIDRFLRLNPTHPNVDYVLYMRGLTDMALDDSALQGFFGVD 132
Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
D + + + S++++ Y NS Y A + + +LA E+ + +YY KRG Y
Sbjct: 133 RSDRDPQYARTAFRDFSKLIQGYPNSQYATDANKRLVYLKERLAKYELSVAQYYTKRGAY 192
Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
VA + R + +L +Y D + + A+ + AY L L +A +V +I
Sbjct: 193 VAVVNRVEQMLRDYPDTQATKNALPLMENAYRELQLAAQADKVAKIITAN 242
>gi|253689513|ref|YP_003018703.1| outer membrane assembly lipoprotein YfiO [Pectobacterium
carotovorum subsp. carotovorum PC1]
gi|251756091|gb|ACT14167.1| outer membrane assembly lipoprotein YfiO [Pectobacterium
carotovorum subsp. carotovorum PC1]
Length = 244
Score = 79.8 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 51/230 (22%), Positives = 93/230 (40%), Gaps = 16/230 (6%)
Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
G S E+Y A L++ NF A +PF +++
Sbjct: 19 GCSSNSKD------AVPDSPPSEIYANAQQKLQDGNFKAAITQLEALDNRYPFGPYSQQV 72
Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR---------- 146
L + Y + + A + + ++ P NVDYV Y+ G++ +
Sbjct: 73 QLDLIYAYYKSAELPLAQASIDRFLRLNPTHPNVDYVLYMRGLTDMALDDSALQGFFGVD 132
Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
D + + + S++++ Y NS Y A + + +LA E+ + +YY KR Y
Sbjct: 133 RSDRDPQYARTAFRDFSKLIQGYPNSQYATDANKRLVYLKERLAKYELSVAQYYTKRSAY 192
Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
VA + R + +L +Y D + + A+ + AY L L +A +V +I
Sbjct: 193 VAVVNRVEQMLRDYPDTQATKTALPLMENAYRELQLAAQADKVAKVIAAN 242
>gi|258545096|ref|ZP_05705330.1| competence lipoprotein ComL [Cardiobacterium hominis ATCC 15826]
gi|258519673|gb|EEV88532.1| competence lipoprotein ComL [Cardiobacterium hominis ATCC 15826]
Length = 287
Score = 79.8 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 57/263 (21%), Positives = 109/263 (41%), Gaps = 16/263 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + I + LV + ++Y+ A + + + A +
Sbjct: 12 MQRMQKIILGLGLMGGLVACSSLEQDETV------NWSAEKLYQTAKTEMNDGAYGSASK 65
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
Y+ + +PF VA+++ L A+ Y G+ ++A S E +I YP+ +DY YY+ G
Sbjct: 66 YYTKLLARYPFGRVAQQATLDLAYAYYRDGETEKAQSEIENFIRTYPQHPYIDYAYYMRG 125
Query: 139 MSYAQMI----------RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
+ + D + K + +V R+ S Y + ARF + +N
Sbjct: 126 VFAYEKDVSIFDRLNPINMAQTDPQPLKQAFNHFDELVRRFPQSEYAEDARFRMLFIKNL 185
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
L E+EI YY+++G Y+AAI R + VL Y A+A + AY L +++
Sbjct: 186 LGQHELEIADYYMRKGAYIAAINRAKGVLEQYEQTPSTPYALALMTRAYRELGEQQLSQD 245
Query: 249 VVSLIQERYPQGYWARYVETLVK 271
++Q + ++ ++
Sbjct: 246 SYRVLQMNFADKLQDTEIQHYLQ 268
>gi|215919037|ref|NP_819783.2| competence lipoprotein ComL [Coxiella burnetii RSA 493]
gi|206583922|gb|AAO90297.2| lipoprotein, ComL family [Coxiella burnetii RSA 493]
Length = 272
Score = 79.8 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 55/230 (23%), Positives = 95/230 (41%), Gaps = 10/230 (4%)
Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
+DV + E++ L ++++S+A + F +PF A ++ L
Sbjct: 32 SGCVRKDVDPYQAYRGKTSAELFTSGERALAKKDYSEAVKNFEALDAIYPFGPHAEQAQL 91
Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT--- 155
+ Y A + + YI YP +NVDY YY+ G+ +
Sbjct: 92 DIIYAYYKNNDTSSAIAAADRYIRLYPRGRNVDYAYYMRGVISFDLGLSWLQKLARVSPV 151
Query: 156 -------KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
+ + + E + +S Y A + RN +A +E+ I +Y+KR YVA
Sbjct: 152 SRDVSTLQQSFTSFATLAEVFPHSRYTPDALTRMRYIRNLMAQREIMIAEFYMKRRAYVA 211
Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
A R V+ ++ + +A+A +V+AY AL L A L+Q YP
Sbjct: 212 AANRGSYVVQHFQGSPQVAKALAIMVQAYRALGLPKMADASNHLLQTNYP 261
>gi|145635281|ref|ZP_01790984.1| conserved hypothetical lipoprotein [Haemophilus influenzae PittAA]
gi|145267425|gb|EDK07426.1| conserved hypothetical lipoprotein [Haemophilus influenzae PittAA]
Length = 262
Score = 79.8 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 50/231 (21%), Positives = 91/231 (39%), Gaps = 17/231 (7%)
Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
+G S + E+Y K L+E ++S+A Y + FP + +
Sbjct: 17 IGCSSGSKD-------VEQASVNELYTKGTTSLQEGSYSEAIRYLKATTERFPSSVYQEQ 69
Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL----------VGMSYAQMI 145
++L + Y Y Q + + ++ Q+P+S N Y Y+ + I
Sbjct: 70 AMLDLIYANYKTQDYTQVLLMVDSFLHQFPQSPNQAYAVYMAGLTNAATGDNFIQDFFGI 129
Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
+ + + +V + NSPY + A + ++ LA E+EI ++Y KR
Sbjct: 130 DRATRETTSMRTAFSNFQNLVRVFPNSPYAQDALARMAYIKDALARHELEIAKFYAKRKA 189
Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
+VA R +L Y D + E + + EAY + L A + +I
Sbjct: 190 WVAVANRVVGMLKQYPDTKATYEGLFLMQEAYEKMGLTALANDTQKIIDAN 240
>gi|262401595|ref|ZP_06078161.1| probable component of the lipoprotein assembly complex (forms a
complex with YaeT YfgL and NlpB) [Vibrio sp. RC586]
gi|262352012|gb|EEZ01142.1| probable component of the lipoprotein assembly complex (forms a
complex with YaeT YfgL and NlpB) [Vibrio sp. RC586]
Length = 240
Score = 79.8 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 49/231 (21%), Positives = 92/231 (39%), Gaps = 17/231 (7%)
Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
G V E+Y +A L+ ++ A E +PF + +
Sbjct: 16 FGCSSS-------PEVVPDVPPSELYSEAQTALQSGSWLTAIEKLEALDSRYPFGAYSEQ 68
Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD---- 151
L + Y + E + P + +D+V Y+ G+++ R+ +D
Sbjct: 69 VQLDLIYAYYKNDDLALGLATIERFTRLNPTHEKMDWVLYMRGLTHMAQDRNFMHDLFNV 128
Query: 152 ------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
K ++++RY NSPY + A+ + +N+LA ++ +YL+R
Sbjct: 129 DRSDRDPEPVKSAFADFKKLLQRYPNSPYAEDAQRRMYALKNRLAEYDLATADFYLRREA 188
Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
++AAI R Q + Y D E A +A+ +EAY L + + L++
Sbjct: 189 WIAAINRTQELQKTYPDTEAARKALDIQLEAYQQLGMTEAVERTKQLMKLN 239
>gi|171059557|ref|YP_001791906.1| putative transmembrane protein [Leptothrix cholodnii SP-6]
gi|170777002|gb|ACB35141.1| putative transmembrane protein [Leptothrix cholodnii SP-6]
Length = 284
Score = 79.8 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 61/258 (23%), Positives = 113/258 (43%), Gaps = 14/258 (5%)
Query: 19 LYKFA----LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFS 74
++KF L + + AV ++ ++ + + ++YE+A
Sbjct: 16 MFKFVQPQGLRVLTATAVVAVLLAGSLGGCAADPKALPEHQNVGKLYEEAREEAAAGASD 75
Query: 75 KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
+A + + + +A+++ L AF+ Y + Q+ ++ E ++ +P S DY Y
Sbjct: 76 RAIKLYERLEGLAAGTLLAQQAQLERAFLHYKMQEKAQSLAIIERFLKLHPTSPAADYAY 135
Query: 135 YLVGMSYAQ----------MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184
YL G+ DQ+A++ Q ++V+RY +S Y AR +
Sbjct: 136 YLQGLINFNDDLGLFGSIVKTDLAERDQQASRDAYQSFKQLVDRYPDSRYAPDARLRINY 195
Query: 185 GRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244
N LAA EV + RYY +RG YVA+ R Q + ++ AEEA+ + +Y L +
Sbjct: 196 IINALAAHEVHVARYYYQRGAYVASANRAQQAVQDFRGVPAAEEALYLMAASYHQLGMAP 255
Query: 245 EAREVVSLIQERYPQGYW 262
+ ++Q YP+ W
Sbjct: 256 LRDDAWRVLQNNYPKSRW 273
>gi|153209399|ref|ZP_01947385.1| competence lipoprotein ComL [Coxiella burnetii 'MSU Goat Q177']
gi|120575370|gb|EAX31994.1| competence lipoprotein ComL [Coxiella burnetii 'MSU Goat Q177']
Length = 255
Score = 79.5 bits (193), Expect = 4e-13, Method: Composition-based stats.
Identities = 55/230 (23%), Positives = 95/230 (41%), Gaps = 10/230 (4%)
Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
+DV + E++ L ++++S+A + F +PF A ++ L
Sbjct: 15 SGCVRKDVDPYQAYRGKTSAELFTSGERALAKKDYSEAVKNFEALDAIYPFGPHAEQAQL 74
Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT--- 155
+ Y A + + YI YP +NVDY YY+ G+ +
Sbjct: 75 DIIYAYYKNNDTSSAIAAADRYIRLYPRGRNVDYAYYMRGVIGFDLGLSWLQKLARVSPV 134
Query: 156 -------KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
+ + + E + +S Y A + RN +A +E+ I +Y+KR YVA
Sbjct: 135 SRDVSTLQQSFTSFATLAEVFPHSRYTPDALTRMRYIRNLMAQREIMIAEFYMKRRAYVA 194
Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
A R V+ ++ + +A+A +V+AY AL L A L+Q YP
Sbjct: 195 AANRGSYVVQHFQGSPQVAKALAIMVQAYRALGLPKMADASNHLLQTNYP 244
>gi|220918604|ref|YP_002493908.1| outer membrane assembly lipoprotein YfiO [Anaeromyxobacter
dehalogenans 2CP-1]
gi|219956458|gb|ACL66842.1| outer membrane assembly lipoprotein YfiO [Anaeromyxobacter
dehalogenans 2CP-1]
Length = 262
Score = 79.5 bits (193), Expect = 5e-13, Method: Composition-based stats.
Identities = 55/227 (24%), Positives = 106/227 (46%), Gaps = 8/227 (3%)
Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
+ E Y+ + LK NF++A ++F +PF+ A S L A V++ +Y
Sbjct: 32 KLGKTPEENYQAGMDELKADNFTEAVKFFEFVKTKYPFSKFAALSELRLADVKFKQDRYL 91
Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQ--------MIRDVPYDQRATKLMLQYMS 163
+AA ++++ +P ++VDY Y G++Y + DQR + +Q ++
Sbjct: 92 EAAEAYKQFVQLHPTHEDVDYAEYRSGLAYFKDAPGDFALFPPASEKDQRQAEKAVQVLT 151
Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
V+ T S Y+ A+ + + +LAA+E + YY KR + A R++ ++ Y +
Sbjct: 152 DFVQTRTQSKYLADAKKVLAEAQTRLAAREWYVAEYYYKRSRWAGAAGRYETLVDKYPGS 211
Query: 224 EHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
H EA+ +L A + + AR+ + + ++P E L+
Sbjct: 212 THEPEALWKLASACLKMDEKHRARKALQTLIVKHPGDARRAEAEKLL 258
>gi|259909397|ref|YP_002649753.1| outer membrane protein assembly complex subunit YfiO [Erwinia
pyrifoliae Ep1/96]
gi|224965019|emb|CAX56549.1| Outer membrane assembly lipoprotein YfiO [Erwinia pyrifoliae
Ep1/96]
gi|283479470|emb|CAY75386.1| UPF0169 lipoprotein PD_1756 precursor [Erwinia pyrifoliae DSM
12163]
Length = 243
Score = 79.5 bits (193), Expect = 5e-13, Method: Composition-based stats.
Identities = 50/230 (21%), Positives = 89/230 (38%), Gaps = 17/230 (7%)
Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
G V E+Y A L++ NF+ A +PF +++
Sbjct: 19 GCSGSRD-------VVPDSPPSEIYATAQQKLQDGNFNGAITQLEALDNRYPFGPYSQQV 71
Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR---------- 146
L + Y A + + ++ P N+DYV Y+ G++ +
Sbjct: 72 QLDLIYAYYKNADLPLAQAAIDRFMRLNPTHPNIDYVIYMRGLTDMALDDSALQGFFGID 131
Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
D + + S+++ Y NS Y AR + +++LA E+ + +Y KR Y
Sbjct: 132 RSDRDPTHARDAFKDFSQLLRGYPNSQYATDARKRLVFLKDRLAKYELSVAEFYTKRAAY 191
Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
VA + R + +L +Y D +A+ + AY L L +A V +I
Sbjct: 192 VAVVNRVEQMLKDYPDTLATRKALPLMENAYRKLQLNAQAERVAKIIAAN 241
>gi|52841419|ref|YP_095218.1| competence lipoprotein ComL [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|52628530|gb|AAU27271.1| competence lipoprotein ComL [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
Length = 260
Score = 79.5 bits (193), Expect = 5e-13, Method: Composition-based stats.
Identities = 60/253 (23%), Positives = 108/253 (42%), Gaps = 10/253 (3%)
Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
+ + + F I + + + +D ++ +++Y A LK++ ++ A
Sbjct: 1 MCFMKRIHVLFLIGLVVGISSCTKWGKDDEDNNPYKGMTAKQLYTAAQTSLKKEEYATAA 60
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
+ +PF+ S + + Y Y AA+ E +I YP +KNVDY YY+
Sbjct: 61 KQLEAMESMYPFSDYTESSQMQLIYAYYKDEDYPSAAATAERFIHLYPRAKNVDYAYYMR 120
Query: 138 GMSYAQMIRDVPYDQRATKL----------MLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
G++ Q R V L + +++++ +S Y A + RN
Sbjct: 121 GLANFQQTRGVFAKMLPMDESWRDPGTQTQALVDFATLIQKFPDSKYKANALQRMIYLRN 180
Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
A E+ + YY KR YVAAI R ++ NY A A++A+ + EA AL L A
Sbjct: 181 MFAQHELNVSLYYFKRKMYVAAIERASYLVKNYPQAPSAQKALVVMYEANKALGLNKAAE 240
Query: 248 EVVSLIQERYPQG 260
+ +++ + Y
Sbjct: 241 DAMAVYKATYHTS 253
>gi|88857988|ref|ZP_01132630.1| putative lipoprotein with tetratricopeptide repeats (TPR) domain
[Pseudoalteromonas tunicata D2]
gi|88819605|gb|EAR29418.1| putative lipoprotein with tetratricopeptide repeats (TPR) domain
[Pseudoalteromonas tunicata D2]
Length = 233
Score = 79.5 bits (193), Expect = 5e-13, Method: Composition-based stats.
Identities = 42/232 (18%), Positives = 95/232 (40%), Gaps = 12/232 (5%)
Query: 35 LVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR 94
L + ++ + + +Y+ A L + +A E + +PF +++
Sbjct: 2 LSACSSKPEQEQI--ERVPNKSAQALYDDAKQTLDSGLYIRAIELLSAIDSRYPFGPMSK 59
Query: 95 KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL----------VGMSYAQM 144
+ + + Y + ++ + + +I P K++DY+YY+
Sbjct: 60 QVQMDLVYAHYQSNNTDKSIATIDRFIRLNPNHKDLDYMYYMRGLNNIKADENAFQEYFG 119
Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204
+ D T+ + + ++++Y S Y A+ N++A EV++ YY R
Sbjct: 120 VDRADRDPIKTREAYKDLDTLIKKYPTSSYADEAKKRQVWLLNKMARYEVKVANYYYDRQ 179
Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
Y+AA R + V+ ++ + + +EA+ +V +Y L L D ++Q
Sbjct: 180 AYLAAANRGKYVVEHFGQSSYVKEALEIMVNSYDKLGLSDLRDHSEQILQAN 231
>gi|88800778|ref|ZP_01116335.1| competence lipoprotein ComL, putative [Reinekea sp. MED297]
gi|88776484|gb|EAR07702.1| competence lipoprotein ComL, putative [Reinekea sp. MED297]
Length = 277
Score = 79.5 bits (193), Expect = 5e-13, Method: Composition-based stats.
Identities = 57/248 (22%), Positives = 101/248 (40%), Gaps = 20/248 (8%)
Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
AL + + L G S+D + YE A +L+++N+S A E
Sbjct: 10 KALRVGLLAVLVALSGCASLPSQD----------TETAYYETAQEYLEKRNYSMAVERLT 59
Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
FPF A S L + Y + A + + E +VDY +++ MSY
Sbjct: 60 ALRDRFPFGRYADASALDLMYAYYGMNDFANALVEADRFTRLNSEHPDVDYAWFVRSMSY 119
Query: 142 AQMIRDVP----------YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
++ + + +S+ RY +S Y A + + ++ LA
Sbjct: 120 YELFLTNRGILGKADPAKRSAEQGQKAFRALSQFTARYPDSRYRPEALDAMVILKDALAR 179
Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
E+ + YY++R ++AA R + V+ +Y +A+ L+EAY AL + + V+S
Sbjct: 180 HELVVADYYIRREAWIAAAERAKTVVEHYPGVTAVGDALVVLIEAYDALDMPTDRSLVLS 239
Query: 252 LIQERYPQ 259
+ YP
Sbjct: 240 RLTNDYPD 247
>gi|118594977|ref|ZP_01552324.1| putative competence lipoprotein precursor [Methylophilales
bacterium HTCC2181]
gi|118440755|gb|EAV47382.1| putative competence lipoprotein precursor [Methylophilales
bacterium HTCC2181]
Length = 272
Score = 79.5 bits (193), Expect = 5e-13, Method: Composition-based stats.
Identities = 51/225 (22%), Positives = 104/225 (46%), Gaps = 9/225 (4%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
T R E+ A +F +++ + E+ + + FP + +A + L A+ + +
Sbjct: 31 DETMGRTDAEIVRGAEVFSANKDWQRTIEWLEKAEKRFPNSPLAPQIKLNLAYAYKNFYR 90
Query: 110 YQQAASLGEEYITQYPESKNVDYVYY---------LVGMSYAQMIRDVPYDQRATKLMLQ 160
++A ++ +++I YP +DY YY + + D + +
Sbjct: 91 DEEALAMLDKFIRTYPNHPALDYAYYLKGVVLFVDRGIVEELTLQDISDRDVSQLEGAFK 150
Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220
+ ++V + S Y + A +T N+++ +E+ + RYY++R YV A+ R + VL NY
Sbjct: 151 ALKQMVRLFPESEYAEDATNRMTYLMNKISERELHVARYYMRREAYVGALNRAKFVLENY 210
Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
S + H EEA+ +V AY L + D A + ++ +P + +
Sbjct: 211 SQSIHQEEALVIMVSAYNKLGIFDLAEDTKRVLDLNFPDTQFRKQ 255
>gi|115377512|ref|ZP_01464712.1| NrfG protein, putative [Stigmatella aurantiaca DW4/3-1]
gi|310820081|ref|YP_003952439.1| competence lipoprotein ComL [Stigmatella aurantiaca DW4/3-1]
gi|115365452|gb|EAU64487.1| NrfG protein, putative [Stigmatella aurantiaca DW4/3-1]
gi|309393153|gb|ADO70612.1| competence lipoprotein ComL [Stigmatella aurantiaca DW4/3-1]
Length = 258
Score = 79.5 bits (193), Expect = 5e-13, Method: Composition-based stats.
Identities = 52/258 (20%), Positives = 97/258 (37%), Gaps = 10/258 (3%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
+ + G S R E L+ +++ KA +YF
Sbjct: 1 MRLTVTCLTTFLLLSTGCASLSER--QAGDPDYAAQADENLRLGSEALEGRDYFKAEKYF 58
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY-------- 132
FP+ ++ + L A V + ++ +A +I YP VDY
Sbjct: 59 EFVKTKFPYLEASKTAELRLADVDFVQDRFPEAREKYNAFIKAYPTHPQVDYAAYQVALS 118
Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
+ + + DQ + L+ ++ + +Y +S Y AR + +LA
Sbjct: 119 HVEDMPSDFFLLPPSEEKDQTEVQSALRALNDFLRQYPDSQYTPQARVQADDAKRRLAEH 178
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
E+ + +Y KR + A R + +L+ Y ++ E A+ L EAYV L A+E +
Sbjct: 179 ELYVAAFYRKRERWRAVAQRLEGMLSRYPGTKYEESALFSLHEAYVKLKEPTRAQETLRQ 238
Query: 253 IQERYPQGYWARYVETLV 270
+ +R P A + ++
Sbjct: 239 VIQRLPGTPAAERAQRML 256
>gi|86159785|ref|YP_466570.1| hypothetical protein Adeh_3366 [Anaeromyxobacter dehalogenans
2CP-C]
gi|85776296|gb|ABC83133.1| tetratricopeptide repeat protein [Anaeromyxobacter dehalogenans
2CP-C]
Length = 262
Score = 79.5 bits (193), Expect = 5e-13, Method: Composition-based stats.
Identities = 56/227 (24%), Positives = 106/227 (46%), Gaps = 8/227 (3%)
Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
+ E Y+ + LK NF++A ++F +PF+ A S L A V++ +Y
Sbjct: 32 KLGKTPEENYQAGMDELKADNFTEAVKFFEFVKTKYPFSKFAALSELRLADVKFKQDRYL 91
Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQ--------MIRDVPYDQRATKLMLQYMS 163
+AA ++++ +P ++VDY Y G+SY + DQR + +Q ++
Sbjct: 92 EAAEAYKQFVQLHPTHEDVDYAEYRSGLSYFKDAPGEFALFPPAAEKDQRQAEKAVQVLT 151
Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
V+ T S Y+ A+ + + +LAA+E + YY KR + A R++ ++ Y +
Sbjct: 152 DFVQTRTQSKYLPDAKKVLGEAQTRLAAREWYVAEYYFKRSLWAGAAGRYETLVDRYPGS 211
Query: 224 EHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
H EA+ +L A + + AR+ + + ++P E L+
Sbjct: 212 RHEPEALWKLASACLKMDEKHRARKALQQLIVKHPGDARRAEAEKLL 258
>gi|161830296|ref|YP_001596931.1| competence lipoprotein ComL [Coxiella burnetii RSA 331]
gi|161762163|gb|ABX77805.1| competence lipoprotein ComL [Coxiella burnetii RSA 331]
Length = 255
Score = 79.1 bits (192), Expect = 5e-13, Method: Composition-based stats.
Identities = 55/230 (23%), Positives = 95/230 (41%), Gaps = 10/230 (4%)
Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
+DV + E++ L ++++S+A + F +PF A ++ L
Sbjct: 15 SGCVRKDVDPYQAYRGKTSAELFTSGERALAKKDYSEAVKNFEALDAIYPFGPHAEQAQL 74
Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT--- 155
+ Y A + + YI YP +NVDY YY+ G+ +
Sbjct: 75 DIIYAYYKNNDTSSAIAAADRYIRLYPRGRNVDYAYYMRGVISFDLGLSWLQKLARVSPV 134
Query: 156 -------KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
+ + + E + +S Y A + RN +A +E+ I +Y+KR YVA
Sbjct: 135 SRDVSTLQQSFTSFATLAEVFPHSRYTPDALTRMRYIRNLMAQREIMIAEFYMKRRAYVA 194
Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
A R V+ ++ + +A+A +V+AY AL L A L+Q YP
Sbjct: 195 AANRGSYVVQHFQGSPQVAKALAIMVQAYRALGLPKMADASNHLLQTNYP 244
>gi|242240267|ref|YP_002988448.1| outer membrane protein assembly complex subunit YfiO [Dickeya
dadantii Ech703]
gi|242132324|gb|ACS86626.1| outer membrane assembly lipoprotein YfiO [Dickeya dadantii Ech703]
Length = 243
Score = 79.1 bits (192), Expect = 6e-13, Method: Composition-based stats.
Identities = 54/230 (23%), Positives = 91/230 (39%), Gaps = 17/230 (7%)
Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
G R E+Y A L+ NF A +PF +++
Sbjct: 19 GCSNSKD-------TVPDRPPAELYATAQEKLQSGNFKAAITQLEALDNRYPFGPYSQQV 71
Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR---------- 146
L + Y + A + + +I P NVDYV Y+ G++ +
Sbjct: 72 QLDLIYAYYKSADLSLAQASIDRFIRLNPTHPNVDYVLYMRGLTNMALDDSALQGFFGVD 131
Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
D + + + S++V+ Y S Y A + + +LA E + +YY KRG Y
Sbjct: 132 RSDRDPQYARSAFKAFSQLVQEYPRSQYATDASKRLAYIKERLAKYEFSVAQYYTKRGAY 191
Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
VA + R + +L +Y D + +A+ + AY L L+ EA +V +I
Sbjct: 192 VAVVNRVEQMLKDYPDTQATRKALPLMENAYRELQLVGEADKVAKIIAAN 241
>gi|258620373|ref|ZP_05715411.1| putative lipoprotein [Vibrio mimicus VM573]
gi|258624746|ref|ZP_05719680.1| putative lipoprotein [Vibrio mimicus VM603]
gi|262172217|ref|ZP_06039895.1| probable component of the lipoprotein assembly complex (forms a
complex with YaeT YfgL and NlpB) [Vibrio mimicus MB-451]
gi|258583033|gb|EEW07848.1| putative lipoprotein [Vibrio mimicus VM603]
gi|258587252|gb|EEW11963.1| putative lipoprotein [Vibrio mimicus VM573]
gi|261893293|gb|EEY39279.1| probable component of the lipoprotein assembly complex (forms a
complex with YaeT YfgL and NlpB) [Vibrio mimicus MB-451]
Length = 241
Score = 79.1 bits (192), Expect = 6e-13, Method: Composition-based stats.
Identities = 48/231 (20%), Positives = 91/231 (39%), Gaps = 17/231 (7%)
Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
G V E+Y +A L+ + A E +PF + +
Sbjct: 16 FGCSSSPD-------VVPDVPPSELYSEAQSALQSGTWLTAIEKLEALDSRYPFGAYSEQ 68
Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD---- 151
L + Y + E + P + +D+V Y+ G+++ R+ +D
Sbjct: 69 VQLDLIYAYYKNDDLALGLATIERFTRLNPTHEKMDWVLYMRGLTHMAQDRNFMHDLFNV 128
Query: 152 ------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
K ++++RY NSPY + A+ + +N+LA ++ +YL+R
Sbjct: 129 DRSDRDPEPVKSAFADFKKLLQRYPNSPYAEDAQRRMYALKNRLAEYDLATADFYLRREA 188
Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
++AAI R Q + + D E A +A+ +EAY L + + L++
Sbjct: 189 WIAAINRTQELQKTFPDTEAARKALDIQLEAYQQLGMTEAVERTEQLMKLN 239
>gi|9971938|gb|AAG10500.1|AF279106_62 predicted secreted lipoprotein [uncultured marine gamma
proteobacterium EBAC31A08]
Length = 272
Score = 79.1 bits (192), Expect = 6e-13, Method: Composition-based stats.
Identities = 48/257 (18%), Positives = 96/257 (37%), Gaps = 19/257 (7%)
Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
L I I LV + ++ Y++A + +N+ A +
Sbjct: 7 LKLFIVLPIVTLLLVSCNSDGPEI--------EQPEKIYYDQAQRRMAGKNYFGAIDSLE 58
Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
+PF A ++ + + Q+ + + A + E++I +P N+DY Y++ G+S
Sbjct: 59 AIESRYPFGKYAEQAQVELIYAQFMNAETEAAHAAAEKFIRLHPRHPNIDYAYFMKGLSS 118
Query: 142 AQMIRDVPYDQRAT----------KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
T K ++ + R+ +S Y A+ RN +A
Sbjct: 119 YTRDNSFIVRMTDTDLSNRDISGAKESFSELTEFLTRFPDSQYSTYAKQRNIYLRNMIAR 178
Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
E+ YY+ ++AAI R V+ N ++ A+ L +Y +L ++ +
Sbjct: 179 NELAAADYYVSVDAHIAAIRRANYVIENIPNSSENYRALKILEASYESLGYIELLEDTKK 238
Query: 252 LIQERYPQGYWARYVET 268
+I Y ++ E
Sbjct: 239 IISINYQD-EQSKKSED 254
>gi|197123839|ref|YP_002135790.1| outer membrane assembly lipoprotein YfiO [Anaeromyxobacter sp. K]
gi|196173688|gb|ACG74661.1| outer membrane assembly lipoprotein YfiO [Anaeromyxobacter sp. K]
Length = 262
Score = 79.1 bits (192), Expect = 6e-13, Method: Composition-based stats.
Identities = 55/227 (24%), Positives = 106/227 (46%), Gaps = 8/227 (3%)
Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
+ E Y+ + LK NF++A ++F +PF+ A S L A V++ +Y
Sbjct: 32 KLGKTPEENYQAGMDELKADNFTEAVKFFEFVKTKYPFSKFAALSELRLADVKFKQDRYL 91
Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQ--------MIRDVPYDQRATKLMLQYMS 163
+AA ++++ +P ++VDY Y G++Y + DQR + +Q ++
Sbjct: 92 EAAEAYKQFVQLHPTHEDVDYAEYRSGLAYFKDAPGDFALFPPASEKDQRQAEKAVQVLT 151
Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
V+ T S Y+ A+ + + +LAA+E + YY KR + A R++ ++ Y +
Sbjct: 152 DFVQTRTQSKYLADAKKVLAEAQTRLAAREWYVAEYYYKRSRWAGAAGRYETLVDKYPGS 211
Query: 224 EHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
H EA+ +L A + + AR+ + + ++P E L+
Sbjct: 212 AHEPEALWKLASACLKMDEKHRARKALQTLIVKHPGDARRAEAEKLL 258
>gi|45644679|gb|AAS73067.1| predicted secreted lipoprotein ComL [uncultured marine gamma
proteobacterium EBAC20E09]
Length = 273
Score = 79.1 bits (192), Expect = 6e-13, Method: Composition-based stats.
Identities = 51/250 (20%), Positives = 94/250 (37%), Gaps = 18/250 (7%)
Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
+ I + + + ++ YE+A + +NF A E
Sbjct: 8 KKTILIAPILMIAISSCNSDGPEI--------EQPEKIYYEQAQRRMAAKNFYGAIESLE 59
Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
+PF A ++ + + + + + + S E++I +P N+DY Y++ G+S
Sbjct: 60 AIENRYPFGKYAEQAQVELIYAHFMNSETEASHSAAEKFIRLHPRHPNIDYAYFMKGLSS 119
Query: 142 AQMIRDVPYDQRAT----------KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
R+ T K ++ + R+ +S Y A+ RN +A
Sbjct: 120 YTRDREFLTRFTDTDLSNRDISGAKESFSELTEFLTRFPDSQYAPYAKQRNVYLRNMIAK 179
Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
E+ YY+ YVAAI R V+ N ++ A+ L +Y AL + +V
Sbjct: 180 NELAAADYYITIDAYVAAIRRANYVIENIPNSSENYRALKLLETSYDALGYSELLDDVRV 239
Query: 252 LIQERYPQGY 261
+I YP
Sbjct: 240 VININYPDEE 249
>gi|149907609|ref|ZP_01896356.1| hypothetical protein PE36_06967 [Moritella sp. PE36]
gi|149809279|gb|EDM69208.1| hypothetical protein PE36_06967 [Moritella sp. PE36]
Length = 245
Score = 79.1 bits (192), Expect = 7e-13, Method: Composition-based stats.
Identities = 56/249 (22%), Positives = 99/249 (39%), Gaps = 16/249 (6%)
Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
L I S+A+ G ++ + + E+Y A L+ NF A
Sbjct: 1 MKKSIKLAISLSLALVMATGCSSKT------EPNVPDKPAIELYSIAQQSLQAGNFVSAI 54
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
E +PF + L + Y QA + + +I P K++DYVYY+
Sbjct: 55 ETLEALDTRYPFGPHTVQVQLDLIYAYYKNSDTAQALANIDRFIRLNPSHKDIDYVYYMR 114
Query: 138 GMSYAQMIRDVPYDQRATKL----------MLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
G++ ++ +D +R+++RY S YV A+ ++
Sbjct: 115 GLTNMGADYNLFHDLFNIDRSDRDPSYANAAFNDFTRLIKRYPQSEYVADAQKRAIAIKS 174
Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
+LA E+ YY+KR Y+AAI R Q ++ N++D E A+ +++AY L
Sbjct: 175 RLARYELSAAEYYMKRKAYIAAIQRAQHIIDNFADTESRTGALKVMIKAYDILEQPTLKA 234
Query: 248 EVVSLIQER 256
++
Sbjct: 235 NAKKILAAN 243
>gi|310766695|gb|ADP11645.1| outer membrane protein assembly complex subunit YfiO [Erwinia sp.
Ejp617]
Length = 243
Score = 79.1 bits (192), Expect = 7e-13, Method: Composition-based stats.
Identities = 49/217 (22%), Positives = 88/217 (40%), Gaps = 10/217 (4%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
V E+Y A L++ NF+ A +PF +++ L + Y
Sbjct: 25 DVVPDSPPSEIYATAQQKLQDGNFNGAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNAD 84
Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR----------DVPYDQRATKLML 159
A + + ++ P N+DYV Y+ G++ + D +
Sbjct: 85 LPLAQAAIDRFMRLNPTHPNIDYVIYMRGLTDMALDDSALQGFFGIDRSDRDPTHARDAF 144
Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219
+ S+++ Y NS Y AR + +++LA E+ + +Y KR YVA + R + +L +
Sbjct: 145 KDFSQLLRGYPNSQYATDARKRLVFLKDRLAKYELSVAEFYTKRAAYVAVVNRVEQMLKD 204
Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
Y D +A+ + AY L L +A V +I
Sbjct: 205 YPDTLATRKALPLMENAYRKLQLNAQAERVAKIIAAN 241
>gi|152977724|ref|YP_001343353.1| TPR repeat-containing protein [Actinobacillus succinogenes 130Z]
gi|150839447|gb|ABR73418.1| TPR-repeat-containing protein [Actinobacillus succinogenes 130Z]
Length = 270
Score = 79.1 bits (192), Expect = 7e-13, Method: Composition-based stats.
Identities = 48/231 (20%), Positives = 97/231 (41%), Gaps = 18/231 (7%)
Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
+ + ++E++ K +++E N+S A +Y FP + + +
Sbjct: 18 TACSSNNE--------VEQASEQELFTKGQAYVQEGNYSDATKYLQAVDSRFPGSDYSEQ 69
Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR-- 153
+ L + Y Y A + ++ +P+S++ DYV Y+ ++ M + D
Sbjct: 70 AELNLIYAAYRNQDYTTALVTADRFLQLHPQSQHTDYVLYMAALTNMSMGDNFIQDFFGI 129
Query: 154 --------ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
+ K +V+ + NSPY A + +++LA E+EI ++Y KR
Sbjct: 130 DRASRESTSMKTAFGNFQTLVQHFPNSPYTPDAITRMAYIKDRLARHELEIAKFYAKRNA 189
Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
+VA R +L Y D +A+ L +AY + L ++ +L++
Sbjct: 190 WVAVSNRVTGMLQTYPDTNATLQALPLLEKAYHEMGLTQLEQKAATLVKAN 240
>gi|149190360|ref|ZP_01868633.1| hypothetical protein VSAK1_14142 [Vibrio shilonii AK1]
gi|148835849|gb|EDL52813.1| hypothetical protein VSAK1_14142 [Vibrio shilonii AK1]
Length = 241
Score = 78.7 bits (191), Expect = 8e-13, Method: Composition-based stats.
Identities = 45/231 (19%), Positives = 91/231 (39%), Gaps = 17/231 (7%)
Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
G + + ++Y +A L+ N++ A E +PF +
Sbjct: 16 FGCADK-------EVTVPDVPPSQLYAEAQESLQGGNWTSAIERLEALDSRYPFGAYTEQ 68
Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD---- 151
L + Y + E + P + D+V Y+ G+++ R+ +D
Sbjct: 69 VQLDLIYAYYKNDDLALGLATIERFSRLNPTHERSDWVLYMRGLTHMAQDRNFMHDILRI 128
Query: 152 ------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
K R+++RY NS Y + A+ + +N+LA ++ +Y++R
Sbjct: 129 DRSDRDPEPVKAAFADFDRLLKRYPNSAYAEDAQKRMVALKNRLAKYDLATADFYIRREA 188
Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
++AAI R Q + Y D E A +++ +AY L + ++ L++
Sbjct: 189 WIAAINRAQEIQKTYPDTEAARQSLVLQKKAYEELGMQEQVERTEKLMELN 239
>gi|90417172|ref|ZP_01225099.1| competence lipoprotein ComL, putative [marine gamma proteobacterium
HTCC2207]
gi|90330948|gb|EAS46209.1| competence lipoprotein ComL, putative [marine gamma proteobacterium
HTCC2207]
Length = 330
Score = 78.7 bits (191), Expect = 9e-13, Method: Composition-based stats.
Identities = 52/214 (24%), Positives = 91/214 (42%), Gaps = 10/214 (4%)
Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
+ + YEK L N+S A FPF A ++ L + Q+ G + + +
Sbjct: 38 TEVDFYEKIQSSLNASNWSVAISNLELLESQFPFGKYAEQAQLELMYAQFKTGDHDSSIA 97
Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT----------KLMLQYMSRI 165
+ +I +P+ NVDY +Y+ G+S + T + S +
Sbjct: 98 AADRFIRLHPQHPNVDYAFYVKGLSEVSQATSAFDNFLPTDNSRRDIGTARDAFGTFSEL 157
Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
+ R+ SPY AR + RNQL E+ + YY RG Y+AA R + V+ N+
Sbjct: 158 LNRFPKSPYAPDARKRLVNLRNQLGRAEIHVANYYFSRGAYLAAANRGRFVVENFQQTPA 217
Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
+ +A + + Y L + + + V ++ YP+
Sbjct: 218 VPDGLAVMAQGYQMLGMQELSDHAVEVLAANYPE 251
>gi|54294130|ref|YP_126545.1| hypothetical protein lpl1194 [Legionella pneumophila str. Lens]
gi|54297143|ref|YP_123512.1| hypothetical protein lpp1188 [Legionella pneumophila str. Paris]
gi|53750928|emb|CAH12339.1| hypothetical protein lpp1188 [Legionella pneumophila str. Paris]
gi|53753962|emb|CAH15433.1| hypothetical protein lpl1194 [Legionella pneumophila str. Lens]
gi|307609941|emb|CBW99469.1| hypothetical protein LPW_12421 [Legionella pneumophila 130b]
Length = 257
Score = 78.7 bits (191), Expect = 9e-13, Method: Composition-based stats.
Identities = 60/250 (24%), Positives = 107/250 (42%), Gaps = 10/250 (4%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
+ + F I + + + +D ++ +++Y A LK++ ++ A +
Sbjct: 1 MKRIHVLFLIGLVVGISSCTKWGKDDEDNNPYKGMTAKQLYTAAQTSLKKEEYATAAKQL 60
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
+PF+ S + + Y Y AA+ E +I YP +KNVDY YY+ G++
Sbjct: 61 EAMESMYPFSDYTESSQMQLIYAYYKDEDYPSAAATAERFIHLYPRAKNVDYAYYMRGLA 120
Query: 141 YAQMIRDVPYDQRATKL----------MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
Q R V L + +++++ +S Y A + RN A
Sbjct: 121 NFQQTRGVFAKMLPMDESWRDPGTQTQALVDFATLIQKFPDSKYKANALQRMIYLRNMFA 180
Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
E+ + YY KR YVAAI R ++ NY A A++A+ + EA AL L A + +
Sbjct: 181 QHELNVSLYYFKRKMYVAAIERASYLVKNYPQAPSAQKALVVMYEANKALGLNKAAEDAM 240
Query: 251 SLIQERYPQG 260
++ + Y
Sbjct: 241 AVYKATYHTS 250
>gi|262170004|ref|ZP_06037694.1| probable component of the lipoprotein assembly complex (forms a
complex with YaeT YfgL and NlpB) [Vibrio cholerae RC27]
gi|262021738|gb|EEY40449.1| probable component of the lipoprotein assembly complex (forms a
complex with YaeT YfgL and NlpB) [Vibrio cholerae RC27]
Length = 241
Score = 78.3 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 50/231 (21%), Positives = 91/231 (39%), Gaps = 17/231 (7%)
Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
G V ++Y +A L+ + A E +PF + +
Sbjct: 16 FGCSSSPD-------VVPDVPPSQLYSEAQTALQSGTWLTAIEKLEALDSRYPFGAYSEQ 68
Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD---- 151
L + Y + E + P + +D+V Y+ G+++ R+ +D
Sbjct: 69 VQLDLIYAYYKNDDLALGLATIERFTRLNPTHEKMDWVLYMRGLTHMAQDRNFMHDLFNI 128
Query: 152 ------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
K ++++RY NSPY + A+ + +N+LA ++ +YL+R
Sbjct: 129 DRRDRDPEPVKAAFADFKKLLQRYPNSPYAEDAQRRMFALKNRLAEYDLATADFYLRREA 188
Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
++AAI R Q + Y D E A +++ +EAY L L D L+Q
Sbjct: 189 WIAAINRTQELQKTYPDTEAARQSLEIQLEAYQQLGLTDAVERTKQLMQLN 239
>gi|329666231|pdb|3QKY|A Chain A, Crystal Structure Of Rhodothermus Marinus Bamd
Length = 261
Score = 78.3 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 56/225 (24%), Positives = 88/225 (39%), Gaps = 10/225 (4%)
Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
+E +E+A+ F + + +A EYF A + A Y +Y AA
Sbjct: 13 SSPQEAFERAMEFYNQGKYDRAIEYFKAVFTYGRTHEWAADAQFYLARAYYQNKEYLLAA 72
Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
S E +I Y V Y M Y ++ DQ T+ ++ ++RY N
Sbjct: 73 SEYERFIQIYQIDPRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHEL 132
Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234
V A + R +LA K+ E R Y +R Y AA ++ V Y D A++A+ +
Sbjct: 133 VDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDAYPDTPWADDALVGAM 192
Query: 235 EAYVALALMD----------EAREVVSLIQERYPQGYWARYVETL 269
AY+A A A E+ + + +P R E L
Sbjct: 193 RAYIAYAEQSVRARQPERYRRAVELYERLLQIFPDSPLLRTAEEL 237
>gi|47779343|gb|AAT38572.1| predicted secreted lipoprotein [uncultured gamma proteobacterium
eBACHOT4E07]
Length = 272
Score = 78.3 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 50/248 (20%), Positives = 95/248 (38%), Gaps = 18/248 (7%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
IF + G + + ++ Y++A + N+ A E
Sbjct: 6 KNIKTLIFGLFLTLIIAGCKSDGEEI--------EQPEKIYYDQAQARMSSGNYFGAIES 57
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
+PF A ++ + + + + + A S E++I +P N+DY Y++ G+
Sbjct: 58 LEAIDTRYPFGKYAEQAQIELIYAHFMNTETEAAHSAAEKFIRLHPRHPNIDYAYFMKGL 117
Query: 140 SYAQMIRDVPYDQRAT----------KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
S RD+ T K ++ + R+ +S YV A+ RN +
Sbjct: 118 SSYTRDRDLLIRFTDTDISNRDVSGAKASFAELTEFITRFPDSQYVSYAKQRNIYLRNLI 177
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
A E+ YYL ++ AI R V+ N ++ A+ L E+Y AL + ++
Sbjct: 178 AKSELSAADYYLTIDAHIGAIRRANYVIENIPNSSENYRALKILEESYEALGYTELLEDI 237
Query: 250 VSLIQERY 257
++ Y
Sbjct: 238 RQVLSSNY 245
>gi|148358772|ref|YP_001249979.1| competence lipoprotein ComL [Legionella pneumophila str. Corby]
gi|296106817|ref|YP_003618517.1| DNA uptake lipoprotein [Legionella pneumophila 2300/99 Alcoy]
gi|148280545|gb|ABQ54633.1| competence lipoprotein ComL [Legionella pneumophila str. Corby]
gi|295648718|gb|ADG24565.1| DNA uptake lipoprotein [Legionella pneumophila 2300/99 Alcoy]
Length = 257
Score = 78.3 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 60/250 (24%), Positives = 107/250 (42%), Gaps = 10/250 (4%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
+ + F I + + + +D ++ +++Y A LK++ ++ A +
Sbjct: 1 MKRIHVLFLIGLVVGISSCTKWGKDDEDNNPYKGMTAKQLYTAAQTSLKKEEYATAAKQL 60
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
+PF+ S + + Y Y AA+ E +I YP +KNVDY YY+ G++
Sbjct: 61 EAMESMYPFSDYTESSQMQLIYAYYKDEDYPSAAATAERFIHLYPRAKNVDYAYYMRGLA 120
Query: 141 YAQMIRDVPYDQRATKL----------MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
Q R V L + +++++ +S Y A + RN A
Sbjct: 121 NFQQTRGVFAKMLPMDESWRDPGTQTQALVDFATLIQKFPDSKYKANALQRMIYLRNMFA 180
Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
E+ + YY KR YVAAI R ++ NY A A++A+ + EA AL L A + +
Sbjct: 181 QHELNVSLYYFKRKMYVAAIERASYLVKNYPQAPSAQKALVVMYEANKALGLNKAAEDAM 240
Query: 251 SLIQERYPQG 260
++ + Y
Sbjct: 241 AVYKATYHTS 250
>gi|147675286|ref|YP_001216200.1| putative lipoprotein [Vibrio cholerae O395]
gi|146317169|gb|ABQ21708.1| putative lipoprotein [Vibrio cholerae O395]
gi|227012533|gb|ACP08743.1| conserved hypothetical protein [Vibrio cholerae O395]
Length = 253
Score = 78.3 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 50/231 (21%), Positives = 91/231 (39%), Gaps = 17/231 (7%)
Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
G V ++Y +A L+ + A E +PF + +
Sbjct: 28 FGCSSSPD-------VVPDVPPSQLYSEAQTALQSGTWLTAIEKLEALDSRYPFGAYSEQ 80
Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD---- 151
L + Y + E + P + +D+V Y+ G+++ R+ +D
Sbjct: 81 VQLDLIYAYYKNDDLALGLATIERFTRLNPTHEKMDWVLYMRGLTHMAQDRNFMHDLFNI 140
Query: 152 ------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
K ++++RY NSPY + A+ + +N+LA ++ +YL+R
Sbjct: 141 DRRDRDPEPVKAAFADFKKLLQRYPNSPYAEDAQRRMFALKNRLAEYDLATADFYLRREA 200
Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
++AAI R Q + Y D E A +++ +EAY L L D L+Q
Sbjct: 201 WIAAINRTQELQKTYPDTEAARQSLEIQLEAYQQLGLTDAVERTKQLMQLN 251
>gi|311693417|gb|ADP96290.1| DNA uptake lipoprotein [marine bacterium HP15]
Length = 291
Score = 78.3 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 51/235 (21%), Positives = 102/235 (43%), Gaps = 18/235 (7%)
Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
+V ++ YE A + NF++A + + +PF A ++
Sbjct: 33 ACASNKQEEV--------LPEKTYYENAREAMTSGNFNEAEQNLDALETYYPFGRYAEQA 84
Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
L + +Y + + + + ++ P+S + DY Y+ G++ + +
Sbjct: 85 QLDLIYARYQNLDLEGSRAAADRFLRLNPQSDHADYALYMRGLASYNLDIGLAARYFPID 144
Query: 157 LM----------LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
+ + S ++ RY +S YV AR + RN++A E+ RYY+KR Y
Sbjct: 145 VAARDPGEQLQSFRDFSELLNRYPDSQYVADARQRMIAVRNRMAELELYAARYYVKRQAY 204
Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
VAA R + ++ NY A EEA+ L E + L L +++ +++++ +P+
Sbjct: 205 VAANNRARYIIENYPTATVTEEALIILAETFRFLELRKGSQDAIAMLRTNFPESD 259
>gi|261212186|ref|ZP_05926472.1| probable component of the lipoprotein assembly complex (forms a
complex with YaeT YfgL and NlpB) [Vibrio sp. RC341]
gi|260838794|gb|EEX65445.1| probable component of the lipoprotein assembly complex (forms a
complex with YaeT YfgL and NlpB) [Vibrio sp. RC341]
Length = 241
Score = 78.3 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 51/231 (22%), Positives = 91/231 (39%), Gaps = 17/231 (7%)
Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
G V E+Y +A L+ + A E +PF + +
Sbjct: 16 FGCSSS-------PEVVPDVPPSELYSEAQTALQSGTWLTAIEKLEALDSRYPFGAYSEQ 68
Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD---- 151
L + Y + E + P + +D+V Y+ G+++ R+ +D
Sbjct: 69 VQLDLIYAYYKNDDLALGLATIERFTRLNPTHEKMDWVLYMRGLTHMAQDRNFMHDLFNV 128
Query: 152 ------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
K ++++RY NSPY + A+ + +N+LA ++ +YL+R
Sbjct: 129 DRFDRDPEPVKAAFADFKKLLQRYPNSPYAEDAQRRMYALKNRLAEYDLATADFYLRREA 188
Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
++AAI R Q + Y D E A +A+ +EAY L L + L+Q
Sbjct: 189 WIAAINRTQELQKTYPDTEAARKALEIQLEAYQQLGLTEAVERTKLLMQLN 239
>gi|332290083|ref|YP_004420935.1| outer membrane protein assembly complex subunit YfiO
[Gallibacterium anatis UMN179]
gi|330432979|gb|AEC18038.1| outer membrane protein assembly complex subunit YfiO
[Gallibacterium anatis UMN179]
Length = 267
Score = 77.9 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 61/256 (23%), Positives = 110/256 (42%), Gaps = 21/256 (8%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K + +++ L S V + E+Y+KA +L+++N+ +A
Sbjct: 3 MNKIKVIAVTALSALVLSACSNSSKEQV------EQAPVSELYQKAQEYLQDENYRQAIR 56
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY--- 135
Y FP+ A+++ L + Y Y S E Y+ +YP+ ++DYV Y
Sbjct: 57 YLEATDNRFPYGEYAQQADLNLIYAYYRNEDYVNTLSTAERYLQKYPQGPHLDYVLYIAG 116
Query: 136 -------LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
+ + + + +V + NS Y A+ ++ R
Sbjct: 117 LTNMALGDNLFQDFFGVERSSRETKPREDAYHNFETLVRYFPNSEYTPDAKQRMSYIRES 176
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQ-LVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
LA + EI +YLKR YVA + R Q +L Y D +A +A+ L +AY AL L +A+
Sbjct: 177 LAKHQYEIAEFYLKRDAYVAVVNRIQDNLLRLYPDTSYAYKALPMLQQAYAALHLDKQAQ 236
Query: 248 EVVSLI----QERYPQ 259
E+ ++ Q+ +P+
Sbjct: 237 EIAQVLANSKQKEFPE 252
>gi|261250363|ref|ZP_05942939.1| probable component of the lipoprotein assembly complex (forms a
complex with YaeT YfgL and NlpB) [Vibrio orientalis CIP
102891]
gi|260939479|gb|EEX95465.1| probable component of the lipoprotein assembly complex (forms a
complex with YaeT YfgL and NlpB) [Vibrio orientalis CIP
102891]
Length = 241
Score = 77.9 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 53/231 (22%), Positives = 95/231 (41%), Gaps = 17/231 (7%)
Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
VG + V E+Y A + L+ N+ A E +PF + +
Sbjct: 16 VGCSSS-------EEVVPDVPPSELYSDAQISLQSGNWLTAIEKLEALDSRYPFGAYSEQ 68
Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD---- 151
L + Y + E ++ P + +D+V Y+ G+++ R+ +D
Sbjct: 69 VQLDLIYAYYKNDDLALGLATIERFMRLNPTQEKLDWVLYMRGLTHMAQDRNFMHDLFNV 128
Query: 152 ------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
K +++ERY NSPY + ++ + +N+LA ++ +YL+R
Sbjct: 129 DRSDRDPEPVKKAFADFKKLLERYPNSPYAEDSQKRMYALKNRLAEYDLATADFYLRREA 188
Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
++AAI R Q + Y D E A +++ +EAY L L D LI+
Sbjct: 189 WIAAINRTQELQKTYPDTEAARKSLDIQLEAYKQLNLQDAVERTEKLIELN 239
>gi|254499158|ref|ZP_05111842.1| hypothetical protein LDG_3116 [Legionella drancourtii LLAP12]
gi|254351619|gb|EET10470.1| hypothetical protein LDG_3116 [Legionella drancourtii LLAP12]
Length = 259
Score = 77.9 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 59/248 (23%), Positives = 106/248 (42%), Gaps = 10/248 (4%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
K +F + L + ++D + +++ + L++ ++ A +
Sbjct: 1 MKRIQVLFLVGLLVSLSSCKTWWNKDDEDKNPFKGMSAEQLHTDSQKALRKGEYASAIKR 60
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
+PF+ S + + Y Y AA+ E +I YP +KNVDY YY+ G+
Sbjct: 61 LEAIETMYPFSDYTESSQMDLIYAYYKNEDYPSAAATAERFIHLYPRAKNVDYAYYMRGL 120
Query: 140 SYAQMIRDVP----------YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
+ Q R V D + +++++ S Y A + RN
Sbjct: 121 ANFQQTRGVFAKVLPLDESWRDPGTQTQAYSDFAVLIQKFPESKYKANALQRMIYLRNMF 180
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
A +E+ + ++Y KR YVAAI R ++ NY A A++A+ + ++ VAL L A EV
Sbjct: 181 AQQELNVSKFYFKRKMYVAAIERASYLVKNYPQAPSAQQALVIMYKSNVALGLNKTAEEV 240
Query: 250 VSLIQERY 257
++ Q Y
Sbjct: 241 KTVYQATY 248
>gi|261494333|ref|ZP_05990827.1| DNA uptake lipoprotein ComL [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261309982|gb|EEY11191.1| DNA uptake lipoprotein ComL [Mannheimia haemolytica serotype A2
str. OVINE]
Length = 259
Score = 77.5 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 54/249 (21%), Positives = 107/249 (42%), Gaps = 18/249 (7%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ KF +A F+ G + + +++Y K +L++ +++ A
Sbjct: 1 MRKFKSLATLVLAGLFVAGCSNSNKE-------LEQSNVQDLYGKGQTYLQDGDYNSAIR 53
Query: 79 YFNQC-SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY-- 135
Y ++ ++G+ ++ L + QY G+Y +A E + YP + N+DYV+Y
Sbjct: 54 YLEAVGTKGGQYSGLGEQTQLSLIYAQYKVGEYYKALDAAERFARSYPNAANMDYVFYLA 113
Query: 136 --------LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
+ + + IV+RY S Y + A+ ++ N
Sbjct: 114 GLSNARLSDNFIQDFFGVNRASRAVDNVRNAYGNFQTIVQRYPQSQYAQDAQNWMNYLFN 173
Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
+LA E+ + ++Y +R YVA + R + +L Y + ++A+ L EAY + + D +
Sbjct: 174 RLAEHELAVVKFYDERNAYVAVVNRIEEMLRFYPNTLATKQALPYLKEAYKQMNIPDAEQ 233
Query: 248 EVVSLIQER 256
+ LIQE
Sbjct: 234 KTELLIQEN 242
>gi|229525358|ref|ZP_04414763.1| hypothetical protein VCA_002980 [Vibrio cholerae bv. albensis
VL426]
gi|229338939|gb|EEO03956.1| hypothetical protein VCA_002980 [Vibrio cholerae bv. albensis
VL426]
Length = 253
Score = 77.1 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 51/231 (22%), Positives = 92/231 (39%), Gaps = 17/231 (7%)
Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
G V ++Y +A L+ + A E +PF + +
Sbjct: 28 FGCSSSPD-------VVPDVPPSQLYSEAQTALQSGTWLTAIEKLEALDSRYPFGAYSEQ 80
Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD---- 151
L + Y + E + P + +D+V Y+ G+++ R+ +D
Sbjct: 81 VQLDLIYAYYKNDDLALGLATIERFTRLNPTHEKMDWVLYMRGLTHMAQDRNFMHDLFNI 140
Query: 152 ------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
K ++++RY NSPY + A+ + +N+LA ++ +YL+R
Sbjct: 141 DRRDRDPEPVKAAFADFKKLLQRYPNSPYAEDAQRRMFALKNRLAEYDLATADFYLRREA 200
Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
++AAI R Q + Y D E A +++A +EAY L L D L+Q
Sbjct: 201 WIAAINRTQELQKTYPDTEAARKSLAIQLEAYQQLGLTDAIERTKQLMQLN 251
>gi|254440813|ref|ZP_05054306.1| outer membrane assembly lipoprotein YfiO [Octadecabacter
antarcticus 307]
gi|198250891|gb|EDY75206.1| outer membrane assembly lipoprotein YfiO [Octadecabacter
antarcticus 307]
Length = 246
Score = 77.1 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 64/210 (30%), Positives = 110/210 (52%), Gaps = 3/210 (1%)
Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
I++ L G D D ++++E+ L+ A +F + R +P
Sbjct: 1 MISLGLLAGCNSF---DSRAAGALDTFSAQQIFERGEFELESGQADDAAFFFGEIERLYP 57
Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
++ A+++L+M AF + Y + + + YI YP ++ Y YL+ +SY I ++
Sbjct: 58 YSEWAKRALIMQAFSYHRDTDYPNSRAAAQRYIDFYPVDEDAAYAQYLLALSYYDQIDEI 117
Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
DQ T LQ + ++ERY +S Y + + + + LAAKE+EIGRYYLKR + A
Sbjct: 118 GRDQGLTFQALQALRVVIERYPDSEYAQSSVLKFDLAFDHLAAKEMEIGRYYLKRDHFAA 177
Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
+I RF++V+ ++ H EA+ RLVE+Y+
Sbjct: 178 SINRFRIVVEDFQTTSHTPEALHRLVESYL 207
Score = 36.7 bits (82), Expect = 3.9, Method: Composition-based stats.
Identities = 16/91 (17%), Positives = 29/91 (31%), Gaps = 8/91 (8%)
Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL--- 240
+ Y + +Y + Q + Y E A A L +Y
Sbjct: 57 PYSEWAKRALIMQAFSYHRDTDYPNSRAAAQRYIDFYPVDEDAAYAQYLLALSYYDQIDE 116
Query: 241 -----ALMDEAREVVSLIQERYPQGYWARYV 266
L +A + + ++ ERYP +A+
Sbjct: 117 IGRDQGLTFQALQALRVVIERYPDSEYAQSS 147
>gi|254797247|ref|YP_003082089.1| putative competence protein ComL [Neorickettsia risticii str.
Illinois]
gi|254590495|gb|ACT69857.1| putative competence protein ComL [Neorickettsia risticii str.
Illinois]
Length = 227
Score = 77.1 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 59/223 (26%), Positives = 100/223 (44%), Gaps = 2/223 (0%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + F +C L G S+ V V + + +Y AVL L+++N+ A E
Sbjct: 1 MRRKLYNFLFVCFLCVLSGCGVGKSKKVLNSKVRED--ELSMYSSAVLSLEKKNYKAAKE 58
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
F + + PF+ + K+ + Y GK+ AA E Y+ YP+ + VD V + G
Sbjct: 59 LFEKVADIAPFSSIGEKAKASYTKILYDEGKFAAAAGSAEGYLLNYPDGEKVDQVLNIKG 118
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
+Y QM + + +++ + S YV A+ + +A K IG
Sbjct: 119 NAYFQMSKGRTNSGEFADKARDAFTVLIQTFPASEYVTDAQKKLLEIDEIMAEKIFSIGS 178
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
+Y K Y AAI RF +L +YS + + A+++ +EAY L
Sbjct: 179 FYFKEMNYHAAIARFDELLRDYSRTKLYDAALSKRLEAYKMLG 221
>gi|255743835|ref|ZP_05417791.1| probable component of the lipoprotein assembly complex (forms a
complex with YaeT YfgL and NlpB) [Vibrio cholera CIRS
101]
gi|262156054|ref|ZP_06029173.1| probable component of the lipoprotein assembly complex (forms a
complex with YaeT YfgL and NlpB) [Vibrio cholerae INDRE
91/1]
gi|262191806|ref|ZP_06049977.1| probable component of the lipoprotein assembly complex (forms a
complex with YaeT YfgL and NlpB) [Vibrio cholerae CT
5369-93]
gi|18203202|sp|Q9KU21|Y708_VIBCH RecName: Full=UPF0169 lipoprotein VC_0708; Flags: Precursor
gi|255738466|gb|EET93855.1| probable component of the lipoprotein assembly complex (forms a
complex with YaeT YfgL and NlpB) [Vibrio cholera CIRS
101]
gi|262030090|gb|EEY48735.1| probable component of the lipoprotein assembly complex (forms a
complex with YaeT YfgL and NlpB) [Vibrio cholerae INDRE
91/1]
gi|262032293|gb|EEY50860.1| probable component of the lipoprotein assembly complex (forms a
complex with YaeT YfgL and NlpB) [Vibrio cholerae CT
5369-93]
gi|327483505|gb|AEA77912.1| Probable component of the lipoprotein assembly complex (forms a
complex with YaeT, YfgL, and NlpB) [Vibrio cholerae
LMA3894-4]
Length = 241
Score = 77.1 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 50/231 (21%), Positives = 91/231 (39%), Gaps = 17/231 (7%)
Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
G V ++Y +A L+ + A E +PF + +
Sbjct: 16 FGCSSSPD-------VVPDVPPSQLYSEAQTALQSGTWLTAIEKLEALDSRYPFGAYSEQ 68
Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD---- 151
L + Y + E + P + +D+V Y+ G+++ R+ +D
Sbjct: 69 VQLDLIYAYYKNDDLALGLATIERFTRLNPTHEKMDWVLYMRGLTHMAQDRNFMHDLFNI 128
Query: 152 ------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
K ++++RY NSPY + A+ + +N+LA ++ +YL+R
Sbjct: 129 DRRDRDPEPVKAAFADFKKLLQRYPNSPYAEDAQRRMFALKNRLAEYDLATADFYLRREA 188
Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
++AAI R Q + Y D E A +++ +EAY L L D L+Q
Sbjct: 189 WIAAINRTQELQKTYPDTEAARKSLEIQLEAYQQLGLTDAIERTKQLMQLN 239
>gi|254291984|ref|ZP_04962764.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
gi|150422123|gb|EDN14090.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
Length = 253
Score = 76.8 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 50/231 (21%), Positives = 91/231 (39%), Gaps = 17/231 (7%)
Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
G V ++Y +A L+ + A E +PF + +
Sbjct: 28 FGCSSSPD-------VVPDVPPSQLYSEAQTALQSGTWLTAIEKLEALDSRYPFGAYSEQ 80
Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD---- 151
L + Y + E + P + +D+V Y+ G+++ R+ +D
Sbjct: 81 VQLDLIYAYYKNDDLALGLATIERFTRLNPTHEKMDWVLYMRGLTHMAQDRNFMHDLFNI 140
Query: 152 ------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
K ++++RY NSPY + A+ + +N+LA ++ +YL+R
Sbjct: 141 DRRDRDPEPVKAAFSDFKKLLQRYPNSPYAEDAQRRMFALKNRLAEYDLATADFYLRREA 200
Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
++AAI R Q + Y D E A +++ +EAY L L D L+Q
Sbjct: 201 WIAAINRTQELQKTYPDTEAARKSLEIQLEAYQQLGLTDAIERTKQLMQLN 251
>gi|15640727|ref|NP_230357.1| hypothetical protein VC0708 [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121587776|ref|ZP_01677536.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
gi|153801890|ref|ZP_01956476.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
gi|153818714|ref|ZP_01971381.1| lipoprotein, putative [Vibrio cholerae NCTC 8457]
gi|153822751|ref|ZP_01975418.1| lipoprotein, putative [Vibrio cholerae B33]
gi|153826781|ref|ZP_01979448.1| lipoprotein, putative [Vibrio cholerae MZO-2]
gi|153829373|ref|ZP_01982040.1| putative lipoprotein [Vibrio cholerae 623-39]
gi|227080888|ref|YP_002809439.1| hypothetical protein VCM66_0666 [Vibrio cholerae M66-2]
gi|229505674|ref|ZP_04395184.1| hypothetical protein VCF_000885 [Vibrio cholerae BX 330286]
gi|229508753|ref|ZP_04398246.1| hypothetical protein VCE_000158 [Vibrio cholerae B33]
gi|229512404|ref|ZP_04401878.1| hypothetical protein VCB_000044 [Vibrio cholerae TMA 21]
gi|229519497|ref|ZP_04408940.1| hypothetical protein VCC_003527 [Vibrio cholerae RC9]
gi|229519978|ref|ZP_04409408.1| hypothetical protein VIF_000494 [Vibrio cholerae TM 11079-80]
gi|229530512|ref|ZP_04419900.1| hypothetical protein VCG_003632 [Vibrio cholerae 12129(1)]
gi|229608692|ref|YP_002879340.1| hypothetical protein VCD_003614 [Vibrio cholerae MJ-1236]
gi|254851038|ref|ZP_05240388.1| conserved hypothetical protein [Vibrio cholerae MO10]
gi|297580829|ref|ZP_06942755.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|298500819|ref|ZP_07010622.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
gi|9655150|gb|AAF93873.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121548003|gb|EAX58083.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
gi|124122601|gb|EAY41344.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
gi|126510736|gb|EAZ73330.1| lipoprotein, putative [Vibrio cholerae NCTC 8457]
gi|126519734|gb|EAZ76957.1| lipoprotein, putative [Vibrio cholerae B33]
gi|148875156|gb|EDL73291.1| putative lipoprotein [Vibrio cholerae 623-39]
gi|149739432|gb|EDM53672.1| lipoprotein, putative [Vibrio cholerae MZO-2]
gi|227008776|gb|ACP04988.1| conserved hypothetical protein [Vibrio cholerae M66-2]
gi|229332285|gb|EEN97773.1| hypothetical protein VCG_003632 [Vibrio cholerae 12129(1)]
gi|229343030|gb|EEO08018.1| hypothetical protein VIF_000494 [Vibrio cholerae TM 11079-80]
gi|229344186|gb|EEO09161.1| hypothetical protein VCC_003527 [Vibrio cholerae RC9]
gi|229350554|gb|EEO15500.1| hypothetical protein VCB_000044 [Vibrio cholerae TMA 21]
gi|229354277|gb|EEO19207.1| hypothetical protein VCE_000158 [Vibrio cholerae B33]
gi|229357897|gb|EEO22814.1| hypothetical protein VCF_000885 [Vibrio cholerae BX 330286]
gi|229371347|gb|ACQ61770.1| hypothetical protein VCD_003614 [Vibrio cholerae MJ-1236]
gi|254846743|gb|EET25157.1| conserved hypothetical protein [Vibrio cholerae MO10]
gi|297535245|gb|EFH74080.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|297540600|gb|EFH76658.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
Length = 253
Score = 76.8 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 50/231 (21%), Positives = 91/231 (39%), Gaps = 17/231 (7%)
Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
G V ++Y +A L+ + A E +PF + +
Sbjct: 28 FGCSSSPD-------VVPDVPPSQLYSEAQTALQSGTWLTAIEKLEALDSRYPFGAYSEQ 80
Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD---- 151
L + Y + E + P + +D+V Y+ G+++ R+ +D
Sbjct: 81 VQLDLIYAYYKNDDLALGLATIERFTRLNPTHEKMDWVLYMRGLTHMAQDRNFMHDLFNI 140
Query: 152 ------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
K ++++RY NSPY + A+ + +N+LA ++ +YL+R
Sbjct: 141 DRRDRDPEPVKAAFADFKKLLQRYPNSPYAEDAQRRMFALKNRLAEYDLATADFYLRREA 200
Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
++AAI R Q + Y D E A +++ +EAY L L D L+Q
Sbjct: 201 WIAAINRTQELQKTYPDTEAARKSLEIQLEAYQQLGLTDAIERTKQLMQLN 251
>gi|119476935|ref|ZP_01617216.1| competence protein ComL [marine gamma proteobacterium HTCC2143]
gi|119449742|gb|EAW30979.1| competence protein ComL [marine gamma proteobacterium HTCC2143]
Length = 294
Score = 76.8 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 61/252 (24%), Positives = 114/252 (45%), Gaps = 18/252 (7%)
Query: 19 LYKFALTIFFSIAVCF-LVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
+ + A +IF S+ + L G D V ++E+YE A L+++++ A
Sbjct: 1 MNRLAKSIFLSVFLLAGLAGCSSD-------DEVPQDMTEKELYESAQDSLRQESYQNAV 53
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
+ FPF A ++ L + Y + + + + + +I +P+ N DY YY+
Sbjct: 54 KKLQLLEARFPFGPYAEQAQLEIIYAHYLNFESEASIAAADRFIRLHPQHPNADYAYYIK 113
Query: 138 GMSYAQM----------IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
G++ D A + +++ RY +SPY A+ + R
Sbjct: 114 GLANYVEGEGFLDRFLPTDMTMRDPGAALQSFEDFRQLLYRYPDSPYASDAKARMLYLRA 173
Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
+LA E+ + YY +RG Y+AA R + V+ N+ +A+A +V+AY L+L D A
Sbjct: 174 RLARYEINVANYYFERGAYIAAANRGRYVVENFPQTPATADALAVMVQAYQLLSLDDLAA 233
Query: 248 EVVSLIQERYPQ 259
+ ++++ E Y
Sbjct: 234 DALAMLNENYSD 245
>gi|121611397|ref|YP_999204.1| hypothetical protein Veis_4485 [Verminephrobacter eiseniae EF01-2]
gi|121556037|gb|ABM60186.1| putative transmembrane protein [Verminephrobacter eiseniae EF01-2]
Length = 265
Score = 76.8 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 55/235 (23%), Positives = 96/235 (40%), Gaps = 16/235 (6%)
Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
+ + T + +A + + KA + +A+++
Sbjct: 21 CSSTT------EDRTAGWSTERIRAEAQDEMSSGAYDKAVPLLEKLEGRAAGTPLAQQAQ 74
Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY----------VYYLVGMSYAQMIRD 147
+ A+ Y +G+ QA + + ++ +P S +DY L S+
Sbjct: 75 IDKAYAHYKSGEKAQAVATLDRFMKLHPVSPALDYALYLKGLANFNDNLGLFSFISREDL 134
Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
DQ+A K + +V R+ S Y + AR +T N LA EV + RYY G YV
Sbjct: 135 SERDQQAAKDSFEAFRELVNRFPQSRYAQDARQRMTYIVNSLAQYEVHVARYYYLHGAYV 194
Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
AAI R L L++Y EEA+ L+++Y AL + + ++ + YPQ +
Sbjct: 195 AAIGRAHLALSDYQGVPAQEEALYILIQSYDALGMTALRDDARRVMDKSYPQSSF 249
>gi|297170430|gb|ADI21462.1| DNA uptake lipoprotein [uncultured gamma proteobacterium
HF0070_10G19]
Length = 263
Score = 76.8 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 50/244 (20%), Positives = 98/244 (40%), Gaps = 18/244 (7%)
Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
I F I++ +G + +++ YE A + +N+ A +
Sbjct: 9 TYLIIFLISLIVSIGCSSNKE--------VIEQPEQQYYELAQRRMNAKNYFAAIQSLEM 60
Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
+PF A ++ + Y G + A S E++I +P N+DY Y++ G++
Sbjct: 61 IETRYPFGRFAEQAQAELIYANYMMGDDEAAHSAAEKFIRLHPRHPNIDYAYFMRGLASY 120
Query: 143 QMIRDVPYDQRATKLM----------LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
L +S + R++ S Y A + RN +A
Sbjct: 121 TRDNSFFARVFKNSLARRDISGAKQSFNELSEFLTRFSQSQYAPYANQRLIFLRNIIAKH 180
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
E+ YY+KR Y+A++ R + V+ N ++ +A+ + ++Y+ L +D A EV
Sbjct: 181 ELAAAEYYVKREAYIASLRRAKYVIENIPNSSENLKALEIMKKSYLELGYLDLAEEVEET 240
Query: 253 IQER 256
++
Sbjct: 241 MRIN 244
>gi|88606744|ref|YP_505635.1| putative competence lipoprotein ComL [Anaplasma phagocytophilum HZ]
gi|88597807|gb|ABD43277.1| putative competence lipoprotein ComL [Anaplasma phagocytophilum HZ]
Length = 233
Score = 76.4 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 73/228 (32%), Positives = 116/228 (50%), Gaps = 4/228 (1%)
Query: 27 FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86
F + L + V+ D D +Y++A + +++ + A N+
Sbjct: 6 VFFVLFTVLAVFSGS----VHADEAIDEGGVHGLYDRASVLFEKKKYKDAIAILNKIEAL 61
Query: 87 FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146
+PF+ VA LMSA Y G Y++AA+L E YI YP S +DY YY+ S ++
Sbjct: 62 YPFSQVAIDGSLMSAEANYELGNYREAATLVEGYIGIYPNSPVIDYAYYIRIASKYMLVP 121
Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
D+ D K +L+Y + V+ + S Y+ + + RN +AAKE GR+Y+KRGEY
Sbjct: 122 DLGLDDSIAKEVLEYAAEFVKMFPESEYLAPVQEKLGHLRNHVAAKEFLTGRFYMKRGEY 181
Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
+AAI RF ++ Y D+ + +E M RL EAY A+ D A +++
Sbjct: 182 IAAIKRFSTLVREYPDSAYFQEGMYRLSEAYSAIGDKDTASVYTNMLA 229
>gi|254224982|ref|ZP_04918596.1| conserved hypothetical protein [Vibrio cholerae V51]
gi|125622369|gb|EAZ50689.1| conserved hypothetical protein [Vibrio cholerae V51]
Length = 253
Score = 76.4 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 49/231 (21%), Positives = 91/231 (39%), Gaps = 17/231 (7%)
Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
G V ++Y +A L+ + A E +PF + +
Sbjct: 28 FGCSSSPD-------VVPDVPPSQLYSEAQTALQSGTWLTAIEKLEALDSRYPFGAYSEQ 80
Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD---- 151
L + Y + E + P + +D+V Y+ G+++ R+ +D
Sbjct: 81 VQLDLIYAYYKNDDLALGLATIERFTRLNPTHEKMDWVLYMRGLTHMAQDRNFMHDLFNI 140
Query: 152 ------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
K ++++RY NSPY + A+ + +N+LA ++ +YL+R
Sbjct: 141 DRRDRDPEPVKAAFADFKKLLQRYPNSPYAEDAQRRMFALKNRLAEYDLATADFYLRREA 200
Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
++AAI R Q + Y + E A +++ +EAY L L D L+Q
Sbjct: 201 WIAAINRTQELQKTYPNTEAARKSLEIQLEAYQQLGLTDAIERTKQLMQLN 251
>gi|326799177|ref|YP_004316996.1| outer membrane assembly lipoprotein YfiO [Sphingobacterium sp. 21]
gi|326549941|gb|ADZ78326.1| outer membrane assembly lipoprotein YfiO [Sphingobacterium sp. 21]
Length = 298
Score = 76.4 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 51/253 (20%), Positives = 95/253 (37%), Gaps = 16/253 (6%)
Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
+ ++G + + + + Y +A+ + +SKA F S +
Sbjct: 7 LLFSIGMIGCKSKFEKLRTGNDNVAK------YREAINLYNNKKYSKALILFEDLSNKYR 60
Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
+ + A+ Y Y A + + QYP+S+ + ++ Y
Sbjct: 61 GRPENEELMYYFAYTNYRLRDYTSARFHFKNFTDQYPQSQRAEECRFMGAYCYYLESPVY 120
Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
DQ T ++ + + Y S + A ++ R++L K + YL G+Y A
Sbjct: 121 TLDQENTLKAIESLQLFINLYPKSDRAEEAAKFIQDLRDKLEHKSYANAKLYLDVGDYKA 180
Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM----------DEAREVVSLIQERYP 258
A+ FQ L +Y D ++AEE +EA A EA E + + YP
Sbjct: 181 AVIAFQNSLRDYPDTKYAEEMEYLAIEAQYLYAKNSQLPSQEARYQEAVEFSNRFIDNYP 240
Query: 259 QGYWARYVETLVK 271
+ + + E+L K
Sbjct: 241 ESKYKKDAESLKK 253
>gi|284007739|emb|CBA73553.1| lipoprotein [Arsenophonus nasoniae]
Length = 269
Score = 76.0 bits (184), Expect = 5e-12, Method: Composition-based stats.
Identities = 55/255 (21%), Positives = 97/255 (38%), Gaps = 17/255 (6%)
Query: 12 FEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQ 71
F + + + + + + G ++Y + L+
Sbjct: 20 FRGNNHVIIRIKYLLAAATLSLLVTGCSSNKD-------AVPESSPTDIYTSSQEKLQSG 72
Query: 72 NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
N+ A + +PF A+++ L + Y + + A + + +I P N+D
Sbjct: 73 NYKGAIKLLETLDNRYPFGPYAQQAQLDMIYAYYKSAELPLAIATIDRFIRLNPTHPNID 132
Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKL----------MLQYMSRIVERYTNSPYVKGARFY 181
YV Y+ G++ + D + S++V Y NS Y A
Sbjct: 133 YVLYMRGLTAQALDDSALQDFFGIDRSDRDPQHALVAFRDFSQLVRFYPNSIYATDASKR 192
Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
+ + +LA E+ I +YY KRG YVA I R + +L NY D + A+ + AY L
Sbjct: 193 LAFLKERLAKYELAIVKYYNKRGAYVAVINRTEQMLKNYPDTQSTRNALKYMEIAYNQLG 252
Query: 242 LMDEAREVVSLIQER 256
L E +V +LI
Sbjct: 253 LSQEKNKVAALIAAN 267
>gi|254468028|ref|ZP_05081434.1| competence lipoprotein ComL [beta proteobacterium KB13]
gi|207086838|gb|EDZ64121.1| competence lipoprotein ComL [beta proteobacterium KB13]
Length = 268
Score = 76.0 bits (184), Expect = 5e-12, Method: Composition-based stats.
Identities = 60/255 (23%), Positives = 106/255 (41%), Gaps = 11/255 (4%)
Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
+ I+ FL G + + T + +Y KA F +++F K +Y +
Sbjct: 2 IRYLTLFISSIFLAGCFIFGEPTEFDE--TTGQSPEWIYGKAEAFTDQRDFRKTIDYLEK 59
Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY------- 135
+ +P + + L A+ Y G+ + + S ++IT YP ++DY YY
Sbjct: 60 LVKRYPDNKLIPSARLNLAYAYYKFGQKELSTSTVNQFITLYPSHPSMDYAYYLKGLNLY 119
Query: 136 --LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
++ M D K S +V++Y NS Y + + + N++A +
Sbjct: 120 QERGIINKLTMQDISDRDVNNLKQAFDAFSELVKKYPNSKYSQDSTDRMIYLMNKIAEYD 179
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+ + RYY+KR YVAA+ R + V Y ++ H EE++ AY L L D +I
Sbjct: 180 LHVARYYMKRRAYVAALNRAKNVYTTYPESIHVEESLVIQYIAYKELKLKDLEIATKKVI 239
Query: 254 QERYPQGYWARYVET 268
YP+ +
Sbjct: 240 DLNYPENKLTSETQE 254
>gi|254361950|ref|ZP_04978081.1| DNA uptake lipoprotein ComL [Mannheimia haemolytica PHL213]
gi|153093497|gb|EDN74477.1| DNA uptake lipoprotein ComL [Mannheimia haemolytica PHL213]
Length = 259
Score = 76.0 bits (184), Expect = 5e-12, Method: Composition-based stats.
Identities = 55/262 (20%), Positives = 110/262 (41%), Gaps = 20/262 (7%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ KF +A F+ G + + +++Y K +L++ +++ A
Sbjct: 1 MRKFKSLATLVLAGLFVAGCSNSNKE-------LEQSNVQDLYGKGQTYLQDGDYNSAIR 53
Query: 79 YFNQC-SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY-- 135
Y ++ ++G+ ++ L + QY G+Y +A E + YP + N+DYV+Y
Sbjct: 54 YLEAVGTKGGQYSGLGEQTQLSLIYAQYKVGEYYKALDAAERFARSYPNAANMDYVFYLA 113
Query: 136 --------LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
+ + + IV+RY S Y + A+ ++ N
Sbjct: 114 GLSNARLSDNFIQDFFGVNRASRAVDNVRNAYGNFQTIVQRYPQSQYAQDAQNWMNYLFN 173
Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
+LA E+ + ++Y +R YVA + R + +L Y + ++A+ L EAY + + D A
Sbjct: 174 RLAEHELAVVKFYDERNAYVAVVNRIEEMLRFYPNTLATKQALPYLKEAYKQMNIPD-AE 232
Query: 248 EVVSLIQERYPQGYWARYVETL 269
+ L+ + Y + E L
Sbjct: 233 QKTELLIQEY-ESKELPNPEKL 253
>gi|209694253|ref|YP_002262181.1| outer membrane protein [Aliivibrio salmonicida LFI1238]
gi|208008204|emb|CAQ78348.1| outer membrane protein [Aliivibrio salmonicida LFI1238]
Length = 255
Score = 76.0 bits (184), Expect = 5e-12, Method: Composition-based stats.
Identities = 52/230 (22%), Positives = 94/230 (40%), Gaps = 17/230 (7%)
Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
G D V E+Y +A + L+ N++ A E +PF + +
Sbjct: 31 GCSSS-------DDVIPDIPPSELYSQAQISLQAGNWTSAVERLEALDSRYPFGAYSEQV 83
Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD----- 151
L +V Y + E + P + D+V Y+ G+++ R +D
Sbjct: 84 QLDLIYVYYKNDDLALGLATIERFNRLNPTNPKADWVLYMRGLTHMAQDRSFMHDLFRVN 143
Query: 152 -----QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
+ + R++ERY +S Y + A+ + +N+LA E+ +YL+R +
Sbjct: 144 RSDRDPEPARSAFKDFKRLLERYPDSLYAEDAQTRMFALKNRLADYELATADFYLRREAW 203
Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
++AI R Q + Y D E A +++ ++ AY L L D + LI
Sbjct: 204 ISAINRSQELQRTYPDTEAARKSLTIMLSAYKELKLDDAIQRTEELIALN 253
>gi|297180027|gb|ADI16252.1| DNA uptake lipoprotein [uncultured bacterium HF0010_16H03]
Length = 245
Score = 75.6 bits (183), Expect = 6e-12, Method: Composition-based stats.
Identities = 50/247 (20%), Positives = 93/247 (37%), Gaps = 18/247 (7%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
SI F+VG + ++ Y+ A ++ +N+ A E
Sbjct: 5 LNLKFFFCLSITALFMVGCNSDGPEI--------EQPEKIYYDLAQKRIQSKNYIAAIES 56
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
+PF A ++ + + + G+ A + E++I +P N+DY Y + G+
Sbjct: 57 LQAIETRYPFGRYAEQAQIELIYAYFMNGENLAAHAAAEKFIRLHPRHPNIDYAYLMKGL 116
Query: 140 SYAQMIRDVPYDQRATKLM----------LQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
S T + +S + R+ S Y A+ RN +
Sbjct: 117 SSYTRDTSFLVRVTDTDIANRDITGAKESFAELSEFLTRFPESQYSPYAKQRNIYLRNMI 176
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
A E+ YY+ G Y+AA+ R + V+ N ++ A+ L E+Y L ++ +V
Sbjct: 177 ARNELSAADYYVSIGAYIAAVRRAKYVIENIPNSSENLRALVILKESYKNLGYLELYEDV 236
Query: 250 VSLIQER 256
+I
Sbjct: 237 ERIIDLN 243
>gi|261493666|ref|ZP_05990185.1| DNA uptake lipoprotein ComL [Mannheimia haemolytica serotype A2
str. BOVINE]
gi|261310666|gb|EEY11850.1| DNA uptake lipoprotein ComL [Mannheimia haemolytica serotype A2
str. BOVINE]
Length = 259
Score = 75.6 bits (183), Expect = 7e-12, Method: Composition-based stats.
Identities = 53/250 (21%), Positives = 107/250 (42%), Gaps = 19/250 (7%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ KF +A F+ G + + +++Y K +L++ +++ A
Sbjct: 1 MRKFKSLATLVLAGLFVAGCSNSNKE-------LEQSNVQDLYGKGQTYLQDGDYNSAIR 53
Query: 79 YFNQC-SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY-- 135
Y ++ ++G+ ++ L + QY G+Y +A E + YP + N+DYV+Y
Sbjct: 54 YLEAVGTKGGQYSGLGEQTQLSLIYAQYKVGEYYKALDAAERFARSYPNAANMDYVFYLA 113
Query: 136 --------LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
+ + + IV+RY S Y + A+ ++ N
Sbjct: 114 GLSNARLSDNFIQDFFGVNRASRAVDNVRNAYGNFQTIVQRYPQSQYAQDAQNWMNYLFN 173
Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
+LA E+ + ++Y +R YVA + R + +L Y + ++A+ L EAY + + D A
Sbjct: 174 RLAEHELAVVKFYDERNAYVAVVNRIEEMLRFYPNTLATKQALPYLKEAYKQMNIPD-AE 232
Query: 248 EVVSLIQERY 257
+ L+ + Y
Sbjct: 233 QKTELLIQEY 242
>gi|118602522|ref|YP_903737.1| putative transmembrane protein [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
gi|118567461|gb|ABL02266.1| putative transmembrane protein [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
Length = 253
Score = 75.2 bits (182), Expect = 9e-12, Method: Composition-based stats.
Identities = 53/247 (21%), Positives = 97/247 (39%), Gaps = 11/247 (4%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
L I L G + +S+T ++ + +A + KA E F
Sbjct: 1 MKKLFIILPFLTLLLNGC--FWQEEAKRESITKGWLPKKFFAQAKEEASSGSTDKAIEIF 58
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY----- 135
Q +P + A +S L A+ Y + Y QA YI YPE + Y YY
Sbjct: 59 EQLQAAYPGSKYALQSKLEIAYALYKSKDYNQAIDRLNSYIKLYPEHFSTPYAYYLRGAV 118
Query: 136 ----LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
+ D + + Y ++ ++ + Y + A+ ++ + RN L+
Sbjct: 119 SQDKSRSFLDDYLTDSAQRDVNSVRDAFNYYLALIYKFPKTEYAEEAKIHLVILRNILSR 178
Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
E+ + YY KRG +AAI R + ++ Y + A+ + Y A++ A++
Sbjct: 179 HELFVAIYYTKRGANIAAINRTKFIIEKYPNTPSVPAALHLMAYNYDAISANILAKDARR 238
Query: 252 LIQERYP 258
+++ YP
Sbjct: 239 VLKNSYP 245
>gi|284105818|ref|ZP_06386222.1| DNA uptake lipoprotein-like protein [Candidatus Poribacteria sp.
WGA-A3]
gi|283830105|gb|EFC34371.1| DNA uptake lipoprotein-like protein [Candidatus Poribacteria sp.
WGA-A3]
Length = 329
Score = 75.2 bits (182), Expect = 9e-12, Method: Composition-based stats.
Identities = 43/252 (17%), Positives = 92/252 (36%), Gaps = 23/252 (9%)
Query: 20 YKFALTIFFS-IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
++ +T+F + C +G S S R +++ + +
Sbjct: 5 FRHPVTLFILSVTSCLTLGCSMFSDNKTPAPSTDAGRTDAQIFVGDTIEMN--------- 55
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
++ A + Y +A + ++ + Y Y +
Sbjct: 56 -------------YDPNVIMKRAESFHEKEGYAEAIVEYQHFLDLHRNHILAPYAQYRLA 102
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
+S+ +MI+ + D K + ++ + S Y AR + + LA +G+
Sbjct: 103 LSHFKMIQTIDRDMTPVKKAQEEFWELIHGFPASQYEAEARVKIKECQGLLAKNHFFVGK 162
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
+Y R +Y+AA RF+ ++ Y E A E+ L + Y L +D AR+ + +++P
Sbjct: 163 FYYHREQYLAAAKRFEKIIIGYPSTEEAIESKLELAKTYQQLGALDWARDWAVELVQQHP 222
Query: 259 QGYWARYVETLV 270
+ L+
Sbjct: 223 RHQLRGDGLKLL 234
>gi|270156941|ref|ZP_06185598.1| putative competence lipoprotein ComL [Legionella longbeachae
D-4968]
gi|289164633|ref|YP_003454771.1| competence lipoprotein comL precursor [Legionella longbeachae
NSW150]
gi|269988966|gb|EEZ95220.1| putative competence lipoprotein ComL [Legionella longbeachae
D-4968]
gi|288857806|emb|CBJ11652.1| putative competence lipoprotein comL precursor [Legionella
longbeachae NSW150]
Length = 257
Score = 74.8 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 64/255 (25%), Positives = 103/255 (40%), Gaps = 10/255 (3%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
K +F + L + +D +S ++Y + L ++ ++ A ++
Sbjct: 1 MKRIQMLFLFALIVSLAACKSWWHKDEEDNSPYKGMTAEQLYTASQKDLHKKEYATAIKH 60
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
+PF+ KS L + Y Y AA+ E +I YP ++NVDY YY+ GM
Sbjct: 61 LEAIETMYPFSDYTEKSQLDLIYAYYKNEDYPAAAATAERFIHLYPRARNVDYAYYMKGM 120
Query: 140 SYAQMIRDVP----------YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
+ Q R V D +V+++ +S Y A +T RN
Sbjct: 121 ANFQQTRGVFAKFLPLDESWRDPGTQIQAYSDFGILVQKFPDSKYKANALQRMTYLRNMF 180
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
A E+ +Y KR YVAAI R V+ NY A ++A+ + E+ AL A E
Sbjct: 181 AQHELNASTFYFKRKMYVAAIERANYVVKNYPQAPSVKQALVVMYESNKALGFNKAAEEA 240
Query: 250 VSLIQERYPQGYWAR 264
+S+ Y R
Sbjct: 241 LSIYNATYHTNKMER 255
>gi|51244660|ref|YP_064544.1| hypothetical protein DP0808 [Desulfotalea psychrophila LSv54]
gi|50875697|emb|CAG35537.1| hypothetical protein DP0808 [Desulfotalea psychrophila LSv54]
Length = 265
Score = 74.8 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 47/213 (22%), Positives = 90/213 (42%), Gaps = 1/213 (0%)
Query: 25 TIFFSIAVCFLVGWER-QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
IA+ L G +S D+ + ++ K + + A YF +
Sbjct: 14 FAIIIIAMSLLGGCADMKSMFDITYEKPDLEFPANDLIIKGMEDYNVGKYFGAISYFQEI 73
Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
+PF+ A + L +A Y KY +A + +++ ++P ++ + YV Y GMS +
Sbjct: 74 LEKYPFSPEAPLAELKAADCNYYMDKYPEALAQYQDFEDRHPTNEAIPYVMYQKGMSNYK 133
Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
I + D + + + S+++ + NSPY AR + + LA E + +YL+
Sbjct: 134 QIDRIDRDPIVARRAVDFFSQLLRAFPNSPYTTNARKNIAEAISFLADHEFAVIEFYLRT 193
Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
+Y A R + ++ Y + +A L E
Sbjct: 194 EKYEQAETRLEYLITAYPNTNVIPKAEKILAEI 226
>gi|163756996|ref|ZP_02164102.1| lipoprotein protein, putative [Kordia algicida OT-1]
gi|161323000|gb|EDP94343.1| lipoprotein protein, putative [Kordia algicida OT-1]
Length = 264
Score = 74.4 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 43/256 (16%), Positives = 86/256 (33%), Gaps = 17/256 (6%)
Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
++ + D+ YE A KE F K+ F Q
Sbjct: 4 FLYLVLIAITFASCSEYQKALKSEDTKVK-------YELAERLYKEGKFKKSSRLFEQIV 56
Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
+ + + A + ++ + E ++ YP+S ++ + SY
Sbjct: 57 PRYRGKPQGERVTFLYARSLFEIEQFIVSGYQFERFVRSYPKSDSIQSAAFYEAKSYYME 116
Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204
DQR T + + + Y +S Y+ A V ++ K EI + Y
Sbjct: 117 SPRYSIDQRETIKAINKLQSFINNYPDSKYLDNANVMVDELTTKIEKKAYEIAKQYNTIS 176
Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL----------ALMDEAREVVSLIQ 254
+Y ++I + L++Y E+AM ++A L +EA +
Sbjct: 177 DYKSSIKAVENFLSDYPGTSFREDAMFLKLDAMYNLATKSFASLMEGRYNEAASAYKTLV 236
Query: 255 ERYPQGYWARYVETLV 270
+ YP+ + + ++
Sbjct: 237 KFYPESKYREEADKIM 252
>gi|262163885|ref|ZP_06031624.1| probable component of the lipoprotein assembly complex (forms a
complex with YaeT YfgL and NlpB) [Vibrio mimicus VM223]
gi|262027413|gb|EEY46079.1| probable component of the lipoprotein assembly complex (forms a
complex with YaeT YfgL and NlpB) [Vibrio mimicus VM223]
Length = 214
Score = 74.4 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 46/212 (21%), Positives = 89/212 (41%), Gaps = 10/212 (4%)
Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
E+Y +A L+ + A E +PF + + L + Y
Sbjct: 1 MPPSELYSEAQSALQSGTWLTAIEKLEALDSRYPFGAYSEQVQLDLIYAYYKNDDLALGL 60
Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD----------QRATKLMLQYMSR 164
+ E + P + +D+V Y+ G+++ R+ +D K +
Sbjct: 61 ATIERFTRLNPTHEKMDWVLYMRGLTHMAQDRNFMHDLFNVDRSDRDPEPVKSAFADFKK 120
Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
+++RY NSPY + A+ + +N+LA ++ +YL+R ++AAI R Q + + D E
Sbjct: 121 LLQRYPNSPYAEDAQRRMYALKNRLAEYDLATADFYLRREAWIAAINRTQELQKTFPDTE 180
Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQER 256
A +A+ +EAY L + + L++
Sbjct: 181 AARKALDIQLEAYQQLGMTEAVERTEQLMKLN 212
>gi|254508946|ref|ZP_05121053.1| DNA uptake lipoprotein [Vibrio parahaemolyticus 16]
gi|219548121|gb|EED25139.1| DNA uptake lipoprotein [Vibrio parahaemolyticus 16]
Length = 214
Score = 74.4 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 47/212 (22%), Positives = 88/212 (41%), Gaps = 10/212 (4%)
Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
E+Y +A + L+ N+ A +PF + + L + Y
Sbjct: 1 MPPSELYSEAQVSLQSGNWLSAISQLEALDSRYPFGAYSEQVQLDLIYAYYKNDDLALGL 60
Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD----------QRATKLMLQYMSR 164
+ E + P + +D+V Y+ G+++ R+ +D K R
Sbjct: 61 ATIERFTRLNPTHEKLDWVLYMRGLTHMAQDRNFMHDLFNVDRSDRDPEPVKKAFADFKR 120
Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
++ERY S Y + ++ + +N+LA ++ +YL+R ++AAI R Q + Y D
Sbjct: 121 LLERYPTSLYAEDSQKRMLALKNRLAEYDLATADFYLRREAWIAAINRTQELQKTYPDTV 180
Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQER 256
A +++ +EAY L L D + LI+
Sbjct: 181 AARKSLKIQLEAYKQLGLEDAIKRTEELIKLN 212
>gi|222053859|ref|YP_002536221.1| outer membrane assembly lipoprotein YfiO [Geobacter sp. FRC-32]
gi|221563148|gb|ACM19120.1| outer membrane assembly lipoprotein YfiO [Geobacter sp. FRC-32]
Length = 244
Score = 73.7 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 45/254 (17%), Positives = 99/254 (38%), Gaps = 14/254 (5%)
Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
+ KF + + I G S +++ F + + A
Sbjct: 2 NMKKFLVGLVLFI-----TGCAGTSETVK---------TADTYFKEGEDFYASRRYEDAI 47
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
+ + F + + L A + Y +AA+ +++ +P Y YY +
Sbjct: 48 AEWKKVKESFSSPELTTMAELKIADAYFENRSYIEAAAAYDDFRKLHPNHDQAAYAYYRL 107
Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
+ Y I + DQ K ++++ ++ Y + YV A+ + + EV +G
Sbjct: 108 ALCYYNQITGIDTDQTPVKNAVKFLDSFIKLYPKAEYVPEAKAKLDECIGKQVEYEVYVG 167
Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
+YL+ G+Y AAI R + LA Y E++++ + + +AY + +E + + ++Y
Sbjct: 168 HFYLRSGKYQAAIKRLEETLAKYPKVENSDQVLFYIGKAYFLSGDKAKGKEAFNRLAKQY 227
Query: 258 PQGYWARYVETLVK 271
+ +++
Sbjct: 228 VSSRYLEEARQVME 241
>gi|302036223|ref|YP_003796545.1| hypothetical protein NIDE0853 [Candidatus Nitrospira defluvii]
gi|300604287|emb|CBK40619.1| protein of unknown function, TPR-like [Candidatus Nitrospira
defluvii]
Length = 306
Score = 73.7 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 39/242 (16%), Positives = 83/242 (34%), Gaps = 24/242 (9%)
Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
V F G + D+ +++ D
Sbjct: 16 VCMVWFAAGCSSKPK--TTADAKPVSGTDEQIF----------------------LGDTI 51
Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
++ + ++ +A + ++ + + Y + S+ +M + +
Sbjct: 52 EKNYDPNVIMKRGEAFFDKEEFAEAIVEYQHFLELHRAHQLAVYAQLRLAESHLRMAKSI 111
Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
D + + ++ + + S Y A + + LA + +G++Y +R Y+A
Sbjct: 112 DRDPEPIQKAIASFEKLRKEFPGSKYEAQALQRIADCHDWLAQTHLFVGQFYYRRASYLA 171
Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
A RF ++ +Y D + A EA+ L Y L D A E + L+ E+YP
Sbjct: 172 AAHRFDQIMKDYPDKKVAPEALYYLALTYQELGADDWAMEKLQLLAEKYPNSENTGDGRR 231
Query: 269 LV 270
L+
Sbjct: 232 LL 233
>gi|162451869|ref|YP_001614236.1| hypothetical protein sce3596 [Sorangium cellulosum 'So ce 56']
gi|161162451|emb|CAN93756.1| hypothetical protein sce3596 [Sorangium cellulosum 'So ce 56']
Length = 285
Score = 73.3 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 53/223 (23%), Positives = 92/223 (41%), Gaps = 8/223 (3%)
Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
VG D ++T R Y +A+ + +++ A F + R FP++ AR
Sbjct: 21 VGC-DFELNDGRTATLTYTEDARAAYNEAMAAFQAKDWEDARALFGEVKRLFPYSRYARL 79
Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV-------GMSYAQMIRDV 148
+ L A + + GKY +A S +I ++ +NV+Y Y + +
Sbjct: 80 ADLRIADLDFEQGKYPEAISEYRAFIQEHRTDRNVEYAKYRMAKALYLDIDDTVFLPPAE 139
Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
DQ T + + + +Y S Y + A + + V +L E+ + RYYLK + A
Sbjct: 140 ERDQATTLEAYKEIRTFLRQYPRSRYREDAAYMLEVVTGRLVRHELYVARYYLKEDAFDA 199
Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
A+ R L + + EA+ E + + DEAR V
Sbjct: 200 ALARIDYALRTFPGSGLDPEALVLKGETLLKMKKPDEARAVFE 242
>gi|298504630|gb|ADI83353.1| outer membrane protein assembly lipoprotein YfiO, putative
[Geobacter sulfurreducens KN400]
Length = 254
Score = 73.3 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 46/243 (18%), Positives = 89/243 (36%), Gaps = 5/243 (2%)
Query: 28 FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87
I + F+ G +S + R + +A F + F A + + +
Sbjct: 13 LLIPLLFVAGCGLFAS-----STAPVSRSPESMAREAEEFQSSRRFEDAIAQWRKVKESY 67
Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147
+ + + A Q+ +G Y +AA+ EE+ +P + Y Y G+SY I
Sbjct: 68 ISPELITLAEIKIADAQFDSGNYIEAAASYEEFRKLHPNHEKSAYALYRQGLSYFNQIHG 127
Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
DQ + + Y S Y + R + R E+ +G++Y + +Y
Sbjct: 128 FDTDQTPVSNTVTIFESFLRLYPQSEYAEEVRNKLDAARQNQVQYEIYVGQFYYRTEKYT 187
Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
+AI R + L Y + +E + L +AY+ RE + + +
Sbjct: 188 SAIKRLEDALKRYPRSPLHDETLYYLGKAYIKAGDKAGGREAFQRLFNEFRTSKYVDEAR 247
Query: 268 TLV 270
+ +
Sbjct: 248 SFL 250
>gi|148266018|ref|YP_001232724.1| DNA uptake lipoprotein-like protein [Geobacter uraniireducens Rf4]
gi|146399518|gb|ABQ28151.1| DNA uptake lipoprotein-like protein [Geobacter uraniireducens Rf4]
Length = 249
Score = 73.3 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 43/217 (19%), Positives = 89/217 (41%)
Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
+ +++ F N+ A + + F ++ L A + Y +AA
Sbjct: 30 KTADTYFKEGEEFYASHNYEDAIAQWKKVKETFSSPELSTLVDLKIADAHFDNQSYIEAA 89
Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
+ E++ +P + Y Y +G+ I + DQ K + +++Y S Y
Sbjct: 90 AAYEDFRKLHPNHEKAAYALYRLGLCNYNQISGIDTDQTPVKNAVNLFEAFLKQYPKSEY 149
Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234
V + + V + E+ +GR+YL+ +Y AA R + L Y +E +E + L
Sbjct: 150 VAEVKDKLDVCIMKQIEYEIYVGRFYLRTEKYAAATKRLEEALLKYPKSEFHDETLFYLG 209
Query: 235 EAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+AY + RE +L+ ++Y + + +++
Sbjct: 210 KAYFLSGDKVKGRETFNLLAKQYASSKYIEEAKQVME 246
>gi|260771110|ref|ZP_05880037.1| probable component of the lipoprotein assembly complex (forms a
complex with YaeT YfgL and NlpB) [Vibrio furnissii CIP
102972]
gi|260613707|gb|EEX38899.1| probable component of the lipoprotein assembly complex (forms a
complex with YaeT YfgL and NlpB) [Vibrio furnissii CIP
102972]
gi|315179285|gb|ADT86199.1| hypothetical protein vfu_A01006 [Vibrio furnissii NCTC 11218]
Length = 241
Score = 73.3 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 48/229 (20%), Positives = 91/229 (39%), Gaps = 17/229 (7%)
Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
+ ++Y +A L+ N+ A E +PF + +
Sbjct: 18 CSSN-------KEIVPDVPPAQLYTEAQTSLQGGNWMTAIEKLEALDSRYPFGAYSEQVQ 70
Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD------ 151
L + Y + E ++ P + +D+V Y+ G+S+ R+ +D
Sbjct: 71 LDLIYAYYKNDDLALGLATIERFMRLNPTHEKMDWVLYMRGLSHMAQDRNFMHDLFNVDR 130
Query: 152 ----QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
K R+++RY NS Y + A+ + +N+LA ++ +YL+R ++
Sbjct: 131 SDRDPEPVKAAFADFKRLLQRYPNSSYAEDAQRRMFALKNRLADYDLATADFYLRREAWI 190
Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
AAI R Q + Y D E A +++ ++AY L L D L++
Sbjct: 191 AAINRTQELQKTYPDTEAARKSLKIQLQAYKELGLKDSIARTQQLMELN 239
>gi|78224207|ref|YP_385954.1| putative lipoprotein [Geobacter metallireducens GS-15]
gi|78195462|gb|ABB33229.1| lipoprotein, putative [Geobacter metallireducens GS-15]
Length = 249
Score = 72.9 bits (176), Expect = 5e-11, Method: Composition-based stats.
Identities = 42/216 (19%), Positives = 81/216 (37%)
Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
R + + A F + A + + + + ++ L A Q++ Y +AA
Sbjct: 30 RNPESMAKAAEEFQTSGRYEDAIAQWKKVRESYASPELTTEAELKIADAQFADKSYIEAA 89
Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
+ EE+ +P + Y Y +S + I + DQ + + Y +S Y
Sbjct: 90 ASYEEFRKLHPNHEKAPYALYRQALSQYEQITGIDTDQTPVSNAVTLFESFLRIYPSSEY 149
Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234
R + V R + E+ +GR+Y + +Y AAI R + L Y + +E + L
Sbjct: 150 AAEVRDKLEVCRLKQVEHEIYVGRFYYRTDQYGAAIKRLEDALKKYPRSPAHDETLFYLG 209
Query: 235 EAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
AY+ + R+ + Y + +
Sbjct: 210 SAYIRTGDKAKGRDAFQRLFAEYRTSKYVDEARKFM 245
>gi|94967104|ref|YP_589152.1| DNA uptake lipoprotein-like [Candidatus Koribacter versatilis
Ellin345]
gi|94549154|gb|ABF39078.1| DNA uptake lipoprotein-like protein [Candidatus Koribacter
versatilis Ellin345]
Length = 497
Score = 72.9 bits (176), Expect = 5e-11, Method: Composition-based stats.
Identities = 43/278 (15%), Positives = 90/278 (32%), Gaps = 27/278 (9%)
Query: 19 LYKFALT-IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
+++ AL +A G + ++ + + +Y++A+ +K F A
Sbjct: 1 MFRRALITAAIGLATLAATGCH-NKKVSNPIANIDSKQPDKVLYDRAMDAMKHNKFDVAR 59
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSA-----GKYQQAASLGEEYITQYPESKNVDY 132
+P + ++ L Y+ +
Sbjct: 60 VTLQTLINTYPDSEFIARAKLSIGDSWYAEGGSAAMTQAENEYRDFIVFFGQSMPNESAE 119
Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
+ + + D K + +++ ++ +SP V A+ + + LA +
Sbjct: 120 AQMKIAGIHYDEMEKPDRDYTHAKRAEEEYRQMILQFPDSPLVPKAKTRLLQVQEILAQR 179
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA------------- 239
E IG++Y+ R +Y AA+ R Q + Y ++EA+ L EA+ A
Sbjct: 180 EFLIGKFYIMREDYPAAVARLQTLSDTYPLFSGSDEALFLLGEAHQAEANLVRKASRLAE 239
Query: 240 -------LALMDEAREVVSLIQERYPQGYWARYVETLV 270
+A S I RYP + +
Sbjct: 240 TQRANAIAGFEKDAVAAYSKIITRYPATDRVEAAKKKL 277
>gi|255038956|ref|YP_003089577.1| outer membrane assembly lipoprotein YfiO [Dyadobacter fermentans
DSM 18053]
gi|254951712|gb|ACT96412.1| outer membrane assembly lipoprotein YfiO [Dyadobacter fermentans
DSM 18053]
Length = 320
Score = 72.9 bits (176), Expect = 5e-11, Method: Composition-based stats.
Identities = 50/278 (17%), Positives = 102/278 (36%), Gaps = 24/278 (8%)
Query: 9 ICIFEAWAYQLYKF--ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVL 66
+ F +A + K A IA+ + + S + ++ Y+ A+
Sbjct: 4 VAFFITFAVNMRKNSPASYFLLFIAILVVTSCSKFSK-------LQKTGTDQQKYDAAMA 56
Query: 67 FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126
+ K+ ++ +A F + + + + A+ QY G+Y + L +++ Y
Sbjct: 57 YYKKADYYRAGLLFEELIPLLKGSTESELAQFYYAYTQYHQGQYNTSQFLFKKFYDTYAR 116
Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
S Y+ S + DQ +T + M + Y +SP+ + Y+ R
Sbjct: 117 SDYAQEALYMHAFSLYKDSSPYNLDQSSTFTAISAMQDFINAYPDSPFREECTRYILELR 176
Query: 187 NQLAAKEVEIGRYYLKRGEYVAAI-----PRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
++L K E R Y K ++ + ++ D+++ EE VE+ LA
Sbjct: 177 SKLEKKAYERARLYHKISDFNPMSLKSAVISIENFRKDFPDSQYNEELAFLKVESQYNLA 236
Query: 242 ----------LMDEAREVVSLIQERYPQGYWARYVETL 269
E + + ++YP G + R E +
Sbjct: 237 SNSFIDKQKERYQEVVKFYQELVDKYPTGKYNRDAERM 274
>gi|88608266|ref|YP_506787.1| putative competence protein ComL [Neorickettsia sennetsu str.
Miyayama]
gi|88600435|gb|ABD45903.1| putative competence protein ComL [Neorickettsia sennetsu str.
Miyayama]
Length = 219
Score = 72.5 bits (175), Expect = 6e-11, Method: Composition-based stats.
Identities = 56/216 (25%), Positives = 99/216 (45%), Gaps = 2/216 (0%)
Query: 28 FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87
F +C L G S+ + + V + + +Y AVL L+++N+ A E F + +
Sbjct: 2 FVCFLCVLSGCGVGKSKKILNNKVRED--ELSMYNSAVLSLEKKNYKVAKELFEKVADIA 59
Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147
PF+ + K+ + Y GK+ AA E Y+ YP+ + +D V + G +Y QM +
Sbjct: 60 PFSSIGEKAKASYTKILYDEGKFAAAAGSAEGYLLDYPDGEKMDQVLNIKGNAYFQMSKG 119
Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
+ +++ + S YV A+ + +A K IG +Y K Y
Sbjct: 120 CTNSSEFADKARDAFTVLIQTFPASEYVTDAQKKLLEIDEIMAEKIFSIGSFYFKEMSYH 179
Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243
AAI RF ++ +YS + + A+++ EAY L +
Sbjct: 180 AAIARFDELIRDYSRTKLYDAAVSKRAEAYKMLGID 215
>gi|322421378|ref|YP_004200601.1| outer membrane assembly lipoprotein YfiO [Geobacter sp. M18]
gi|320127765|gb|ADW15325.1| outer membrane assembly lipoprotein YfiO [Geobacter sp. M18]
Length = 260
Score = 72.1 bits (174), Expect = 7e-11, Method: Composition-based stats.
Identities = 40/238 (16%), Positives = 87/238 (36%), Gaps = 9/238 (3%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
+ I + + + + +++ ++F +A F
Sbjct: 4 RPLRYIGLFFLLSLISACAT---------APAPAKSAESYFKEGEAAYASRHFEEAITQF 54
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
+ + ++ ++ L A + + +AA+ E + +P ++ V Y Y +S
Sbjct: 55 KKVKESYSSPELSAQAELKIADAYFENDAFIEAAAEYESFRKLHPTNEKVPYALYRQALS 114
Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
I + DQ K + Y+ + +Y S + AR ++ R + A E +G +Y
Sbjct: 115 NYSQITGIDTDQTPVKNAVHYLEMFLAQYPGSEHAADARAKLSDCRAKELAYENYVGNFY 174
Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
++ +Y +AI R L + + ++ L +AY A E + YP
Sbjct: 175 VRTKKYPSAIKRLNEALERFPGEPGLADTLSYLEQAYRKSGDAARAEEARKRLAAEYP 232
>gi|39995608|ref|NP_951559.1| putative lipoprotein [Geobacter sulfurreducens PCA]
gi|39982371|gb|AAR33832.1| lipoprotein, putative [Geobacter sulfurreducens PCA]
Length = 254
Score = 72.1 bits (174), Expect = 8e-11, Method: Composition-based stats.
Identities = 45/243 (18%), Positives = 89/243 (36%), Gaps = 5/243 (2%)
Query: 28 FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87
I + F+ G +S + R + +A F + F A + + +
Sbjct: 13 LLIPLLFVAGCGLFAS-----STAPVSRSPESMAREAEEFQSSRRFEDAIAQWRKVKESY 67
Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147
+ + + A Q+ +G Y +AA+ EE+ +P + Y Y G+SY I
Sbjct: 68 ISPELITLAEIKIADAQFDSGNYIEAAASYEEFRKLHPNHEKSAYALYRQGLSYFNQIHG 127
Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
DQ + + Y S + + R + R E+ +G++Y + +Y
Sbjct: 128 FDTDQTPVSNTVTIFESFLRLYPQSEHAEEVRNKLDAARQNQVQYEIYVGQFYYRTEKYT 187
Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
+AI R + L Y + +E + L +AY+ RE + + +
Sbjct: 188 SAIKRLEDALKRYPRSPLHDETLYYLGKAYIKAGDKAGGREAFQRLFNEFRTSKYVDEAR 247
Query: 268 TLV 270
+ +
Sbjct: 248 SFL 250
>gi|297184481|gb|ADI20595.1| DNA uptake lipoprotein [uncultured gamma proteobacterium
EBAC_27G05]
Length = 272
Score = 71.4 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 46/247 (18%), Positives = 90/247 (36%), Gaps = 18/247 (7%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
+ + + FL G D + ++ Y+ A ++ NF A E
Sbjct: 8 IRTFAIFTVILPMLFLSGCNS--------DGPVVEQPEKVYYDLAQRRMQANNFFSAIEA 59
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
+PF A ++ + + G+ + + E++I P N+DY Y++ G+
Sbjct: 60 LQAIESRYPFGRYAEQAQSELIYAYFMNGEDEASHEAAEKFIRLNPRHPNIDYAYFMKGI 119
Query: 140 SYAQMIRDVPYDQRAT----------KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
+ + + + K +S + R+ S Y A + R+ +
Sbjct: 120 ASYTRDKGMFARVFKSDLSNRDISGAKQAFSELSEFLTRFPQSQYAPYASQRLIYLRSLI 179
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
A E+ YY+KR YVAA+ R V+ N + A+ + + Y L ++
Sbjct: 180 AKSELVAADYYMKRKAYVAALRRANYVIENIPNTSETIRALKVVRDCYRELGYFKLMDDI 239
Query: 250 VSLIQER 256
+I
Sbjct: 240 QKIIDAN 246
>gi|86131754|ref|ZP_01050351.1| conserved hypothetical protein [Dokdonia donghaensis MED134]
gi|85817576|gb|EAQ38750.1| conserved hypothetical protein [Dokdonia donghaensis MED134]
Length = 270
Score = 71.0 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 48/256 (18%), Positives = 95/256 (37%), Gaps = 21/256 (8%)
Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
F +AV L D + +Y + + KA + + Q
Sbjct: 4 IFFLLVAVVLLSSCSAYQDVLKNDDIKAKYTFADSLYSQ-------GKYKKALKLWEQIV 56
Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
+ A + + A Y G Y Q E ++ +P+S+ + Y SY
Sbjct: 57 PLYRGRPQAERVSYLYANTFYELGDYYQGGYQFERFVKSFPQSEKREEAAYKSAESYYNR 116
Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK-- 202
DQ T + + + + +Y +S + A V ++ K EI + Y K
Sbjct: 117 SPRFNLDQGDTYIAMGKLQDFINQYPDSERLDDANAKVQELNQKIERKAYEIAKGYNKIG 176
Query: 203 --RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL----------MDEAREVV 250
RG + AI F L ++ +++ E+A+ + LAL +++A+E
Sbjct: 177 ESRGTFPNAIKAFDNFLLDFPGSKYREDALYWKFNSTYQLALGSVRRRKAERLEDAKEAY 236
Query: 251 SLIQERYPQGYWARYV 266
+ +++ +P+G ++
Sbjct: 237 NALEKYFPEGKYSEQA 252
>gi|118581055|ref|YP_902305.1| hypothetical protein Ppro_2643 [Pelobacter propionicus DSM 2379]
gi|118503765|gb|ABL00248.1| Tetratricopeptide TPR_2 repeat protein [Pelobacter propionicus DSM
2379]
Length = 246
Score = 70.6 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 46/247 (18%), Positives = 94/247 (38%), Gaps = 10/247 (4%)
Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
F + L G + + E+Y ++ + A +
Sbjct: 5 FRAVFAALCTLTLLQGCA----------ELKLNKPTDELYRDGEASFQKGKYEDAVIQWR 54
Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
+ FP ++ + + A + Y +AA+ E + +P + + Y Y G+S
Sbjct: 55 RVKESFPPPELSARVEINIADAYFLNKDYIEAAAEYENFRKLHPNHELMGYALYGQGLSN 114
Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
+ I+ + DQ K L + Y + + + R++ E+ +G++YL
Sbjct: 115 FKQIKGIDTDQTPVKNALSLFESYTKLYPGGANLPDVQARIVDCRDKQLQYELYVGKFYL 174
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
+ G Y AAI RF+ L + D ++E + L AYV + +EV + + + +
Sbjct: 175 RTGSYPAAIARFEEALKGFGDLPRSDETLFYLGSAYVENGQKPKGQEVYTRLLKEHATSS 234
Query: 262 WARYVET 268
+ V+
Sbjct: 235 FVPEVKK 241
>gi|58584928|ref|YP_198501.1| DNA uptake lipoprotein [Wolbachia endosymbiont strain TRS of Brugia
malayi]
gi|58419244|gb|AAW71259.1| DNA uptake lipoprotein [Wolbachia endosymbiont strain TRS of Brugia
malayi]
Length = 237
Score = 69.8 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 71/238 (29%), Positives = 120/238 (50%), Gaps = 9/238 (3%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+YK +T F + F + D V + + E+YE+AV ++ + +A
Sbjct: 1 MYKALITCFIFLVCSFTRSYAS--------DDVHLEKSETELYEEAVELFDQKKYKQAIR 52
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
F + +PF+ A K+ L+S Y+ Y AAS ++YI YP +++ YVYYL
Sbjct: 53 AFRKIEDLYPFSYWAMKAKLLSGISHYNMDDYSSAASDMDDYIYIYPNGEDLPYVYYLRV 112
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
+SY I V Q+ L+ + V ++ S Y++ + V + + + KE IG+
Sbjct: 113 LSYYMQINRVQLGQQTAYKALELAAEYVNLFSESEYIEEMKEKVRLITDHILKKEYSIGK 172
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
+Y +RGEY+AAI RFQ ++++ D + ++ L+ AY AL L EA + SL+ E
Sbjct: 173 FYFRRGEYLAAIKRFQNIISS-KDYSYFPRSINYLIAAYSALGLDLEAGQYESLLAEN 229
>gi|150025880|ref|YP_001296706.1| lipoprotein [Flavobacterium psychrophilum JIP02/86]
gi|149772421|emb|CAL43903.1| Probable lipoprotein [Flavobacterium psychrophilum JIP02/86]
Length = 264
Score = 69.8 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 48/258 (18%), Positives = 92/258 (35%), Gaps = 17/258 (6%)
Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
++ + + D ++Y ++ ++KA F Q
Sbjct: 2 KKILYTFLIIALFSSCSEYQKAIKSEDVAVKTAAATKMY-------EKGKYAKAIRLFEQ 54
Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
S A M + Y G+Y + E + YP+SKN + +L SY+
Sbjct: 55 ISPVLKGKPEAENVFYMFSQSYYKTGQYYLSGYQFESFAALYPKSKNTEEAAFLGAKSYS 114
Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
++ DQ T + + + +Y NS Y+ A V R +L K EI + Y
Sbjct: 115 ELSPTYSLDQTDTDKAINKLQNFINKYPNSKYLADANVVVKDLREKLEKKAFEIAKQYNT 174
Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM----------DEAREVVSL 252
++ AI +A+Y + E+A+ + A LA+ + A+E
Sbjct: 175 ISDFKPAIKALDNFIADYPGTPYKEKALFYKLNASYQLAINSVPSKMQARLNVAKEAQEA 234
Query: 253 IQERYPQGYWARYVETLV 270
+ P + + + ++
Sbjct: 235 LLNFNPNTEFKKTADEML 252
>gi|212702987|ref|ZP_03311115.1| hypothetical protein DESPIG_01025 [Desulfovibrio piger ATCC 29098]
gi|212673575|gb|EEB34058.1| hypothetical protein DESPIG_01025 [Desulfovibrio piger ATCC 29098]
Length = 243
Score = 69.8 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 43/209 (20%), Positives = 85/209 (40%), Gaps = 4/209 (1%)
Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
+ ++ ++A+ L G + +E++E + E+N+ +A
Sbjct: 1 MFKNYLRSLTLALAIFSLSGCGI----IDMIYLPPAEDTAQEIFEAGNDAMSEKNYVRAV 56
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
E +N+ +PF+ + L A Y +Y AA +++ + +P + YV Y
Sbjct: 57 ELYNKLRDTYPFSPYTVDAELALADAYYLDEEYVLAAETYKDFESLHPRHEATPYVIYQT 116
Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
GMS + R + + +Y +R+ + Y +SPY K A + R +A E+ I
Sbjct: 117 GMSLMKQFRSIDRATTILQEAHEYFARLRQVYPDSPYAKDAEEKMHTCRRLMAEHELYIA 176
Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
+ +Y A R++ V + D
Sbjct: 177 DVFWHMEKYGPAWRRYEYVSETFPDVPEV 205
>gi|158522066|ref|YP_001529936.1| DNA uptake lipoprotein-like protein [Desulfococcus oleovorans Hxd3]
gi|158510892|gb|ABW67859.1| DNA uptake lipoprotein-like protein [Desulfococcus oleovorans Hxd3]
Length = 255
Score = 69.4 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 44/213 (20%), Positives = 92/213 (43%), Gaps = 9/213 (4%)
Query: 17 YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76
+ + + A+ + + +C + G + +E+ ++ + + + K+
Sbjct: 30 FYMKQLAVILSALLMICAMAGCAH---------KPVQEKSAQELADEGTRYFDKGRYKKS 80
Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
E F +PF+ + + L A ++ +Y+ A S E + +P ++V +V +
Sbjct: 81 IEAFENLRDWYPFSKLTTLADLKVADAYFNMEEYESAVSAYENFERLHPRHESVPFVIFR 140
Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196
G+ + + + DQ + SR+V Y +S Y A Y+ R LAA E+ +
Sbjct: 141 TGLCHFNRLDTIDRDQTPAHRAIDAFSRLVRAYPDSEYASQATDYIHQCRESLAAHELYV 200
Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
++Y K Y +A+ RF+ ++ Y D E A
Sbjct: 201 AKFYFKTKRYRSALYRFKQIIEKYPDVGDIETA 233
>gi|291288282|ref|YP_003505098.1| outer membrane assembly lipoprotein YfiO [Denitrovibrio acetiphilus
DSM 12809]
gi|290885442|gb|ADD69142.1| outer membrane assembly lipoprotein YfiO [Denitrovibrio acetiphilus
DSM 12809]
Length = 259
Score = 69.1 bits (166), Expect = 6e-10, Method: Composition-based stats.
Identities = 43/243 (17%), Positives = 92/243 (37%), Gaps = 10/243 (4%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
+ I V G +++ E + + + K+ N+ KA YF
Sbjct: 1 MRKTVLLIMICVLTFAGCAKKAPN---------QMTAEESMKTGMTYFKKGNYEKAVTYF 51
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
+ +A K+ L A + KY +A E ++ Y E+++ + +G+S
Sbjct: 52 ENTLMEAETPEMAAKAQLFLADSYFLDKKYVEAIPAYELFLEIYGETEDANTAMLRLGLS 111
Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
+ I + D A + L +++ ++ + R+ LA +E+ + ++Y
Sbjct: 112 HYAQIDTIDRDMSAAEGALNAFTKLRDKSPAFAREFELNKKIVELRSMLAERELYVAKFY 171
Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE-AYVALALMDEAREVVSLIQERYPQ 259
+ E +A R + +++NYSD +EA+ EA + + + P
Sbjct: 172 FRIKEPDSAEGRLKYLISNYSDTASYDEALYMYANWLADKKGREAEAVKYYRKLIDERPN 231
Query: 260 GYW 262
+
Sbjct: 232 SKY 234
>gi|297171549|gb|ADI22547.1| DNA uptake lipoprotein [uncultured Oceanospirillales bacterium
HF0500_09M11]
Length = 187
Score = 69.1 bits (166), Expect = 7e-10, Method: Composition-based stats.
Identities = 33/158 (20%), Positives = 62/158 (39%)
Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
++ ++ + ++ D + + + R+V
Sbjct: 5 QRFMRSYPAHQRLDYALYMRGLANFYMERGFFDSMMNTDKSARDLSSARDAFEDFERLVT 64
Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
R+ +S Y + AR + RN+ A E+ RYY +RG Y+AAI R Q V+ +Y
Sbjct: 65 RFPDSEYSEDARARMVFIRNEFARHELHAARYYARRGAYIAAIGRAQYVVQHYQQTPLVP 124
Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
EA+A +V+ Y L A + ++ +P +
Sbjct: 125 EALAIMVKGYERLDRPALADKSRRILATNWPDSEYLED 162
>gi|255020043|ref|ZP_05292116.1| Probable component of the lipoprotein assembly complex (forms a
complex with YaeT, YfgL, and NlpB) [Acidithiobacillus
caldus ATCC 51756]
gi|254970572|gb|EET28061.1| Probable component of the lipoprotein assembly complex (forms a
complex with YaeT, YfgL, and NlpB) [Acidithiobacillus
caldus ATCC 51756]
Length = 209
Score = 68.7 bits (165), Expect = 8e-10, Method: Composition-based stats.
Identities = 47/202 (23%), Positives = 89/202 (44%)
Query: 68 LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127
+ ++ +A F ++P+ A ++ L +A+ Y G + A + + +I +P +
Sbjct: 1 MDSGDYDRAIRDFQNLQAEYPYGPYAEQAQLDTAYAYYKQGDSKAAVAAADAFIKAHPVN 60
Query: 128 KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
+VDY +YL G++ Q I +D R LQ + + Y S Y AR ++ +
Sbjct: 61 PHVDYAWYLKGLAQYQAIEGAEFDPRPDYQALQTFRYVAKTYPKSAYALSARLHIAKIID 120
Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
L + + I ++Y R +VAA R V+ +Y + A+ L +Y L L+ AR
Sbjct: 121 ILGERNLRICKFYYVRHAFVAAANRCVRVIRDYQLSPARNMALYYLARSYRRLDLLGLAR 180
Query: 248 EVVSLIQERYPQGYWARYVETL 269
++ P + + L
Sbjct: 181 TTAIILHHNAPTAPETKKLRAL 202
>gi|228472533|ref|ZP_04057293.1| outer membrane assembly lipoprotein YfiO [Capnocytophaga gingivalis
ATCC 33624]
gi|228275946|gb|EEK14702.1| outer membrane assembly lipoprotein YfiO [Capnocytophaga gingivalis
ATCC 33624]
Length = 264
Score = 68.7 bits (165), Expect = 8e-10, Method: Composition-based stats.
Identities = 54/262 (20%), Positives = 89/262 (33%), Gaps = 17/262 (6%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
K + F + D Y+ A + +++++
Sbjct: 1 MKGKVLTFIVVLSFAFSSCGEYQKALKSDDYELK-------YKVAKALYDKGDYNRSMRL 53
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
+ + + +L M A Y KY A E ++ YP S+ + V +L G
Sbjct: 54 WEKVVGYYIGRPQGEDALYMYADSFYKRKKYLLAGYQYERFLKNYPRSEKAEEVLFLQGK 113
Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
DQ AT L + ++RY N Y++ A V N+L K EI +
Sbjct: 114 CNFLESPKYSLDQDATYKALDQLQEYIDRYPNGAYLREANNMVLELLNKLQHKSFEIAKG 173
Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM----------DEAREV 249
Y K +Y AAI F L + EEAM + + LA +EA+
Sbjct: 174 YDKIRDYQAAIKSFDNFLVENPGSTFREEAMYYRLHSAYELAKNSIKSKEKQRFEEAKSY 233
Query: 250 VSLIQERYPQGYWARYVETLVK 271
L YP+ + + +
Sbjct: 234 YELFSRTYPESNFMTKANRMYQ 255
>gi|322436942|ref|YP_004219154.1| outer membrane assembly lipoprotein YfiO [Acidobacterium sp.
MP5ACTX9]
gi|321164669|gb|ADW70374.1| outer membrane assembly lipoprotein YfiO [Acidobacterium sp.
MP5ACTX9]
Length = 601
Score = 68.7 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 44/228 (19%), Positives = 90/228 (39%), Gaps = 7/228 (3%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
V +++Y+KA +++ ++ A +P + ++ L A Y G
Sbjct: 125 VDSKLPDKQLYDKAYAAIQKGHYDVARLDLQTMLNTYPDSQYQMRAKLAIADSWYKEGGT 184
Query: 111 ---QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
QA S ++ +P + +G Y + + D + + R++
Sbjct: 185 AALTQAESEYADFRVFFPNAPEAAEAQMRIGDIYFRQMDRPDRDHAKSIHAEEEYRRMLT 244
Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
Y +S V A+ + + LA ++ +I +Y R + A I R+Q V+ Y H +
Sbjct: 245 DYPDSTLVPQAKQRLRDVQEVLATRDADIAAFYATRENWAAVIARYQTVVDTYPLYSHMD 304
Query: 228 EAMARLVEAYVALALM----DEAREVVSLIQERYPQGYWARYVETLVK 271
+A+ L +AY A A A +++ Y A Y + +++
Sbjct: 305 DALIGLGDAYEAQARYIRTLKLAEGPKQKLEKTYDDQAIAAYSKVVLE 352
>gi|303326797|ref|ZP_07357239.1| putative competence protein [Desulfovibrio sp. 3_1_syn3]
gi|302862785|gb|EFL85717.1| putative competence protein [Desulfovibrio sp. 3_1_syn3]
Length = 243
Score = 68.3 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 46/232 (19%), Positives = 94/232 (40%), Gaps = 4/232 (1%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
K ++++ + G + +E++E A + E+N+ +A E
Sbjct: 3 KKLLRCFVLAVSLFAVSGCGI----IDMIYLPPAEDTAQEIFEAANDAMSEKNYVRAVEL 58
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
+N+ +PF+ + L + +Y+ AA +++ + +P + + YV Y GM
Sbjct: 59 YNKLRDTYPFSPYTIDAELSLGDAYFLDEEYELAAETYKDFESLHPRHEAIPYVLYQTGM 118
Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
S + R + + Y +R+ + Y +SPY KGA ++ R +A E+ I
Sbjct: 119 SLMKQFRSIDRATTELQEAYDYFNRLSQMYPDSPYAKGAEEHMHTCRKLMAEHELYIADV 178
Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
+ +Y A R++ ++ N+ D E A ++A E
Sbjct: 179 FWHMKKYGPAWRRYEFIMENFKDVPEVAEHAKEKSLAAYHNYREEQAAETRE 230
>gi|297569607|ref|YP_003690951.1| outer membrane assembly lipoprotein YfiO [Desulfurivibrio
alkaliphilus AHT2]
gi|296925522|gb|ADH86332.1| outer membrane assembly lipoprotein YfiO [Desulfurivibrio
alkaliphilus AHT2]
Length = 268
Score = 67.9 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 47/200 (23%), Positives = 88/200 (44%), Gaps = 1/200 (0%)
Query: 35 LVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR 94
+ G ++ RD ++ D R + + + + + +A E F +PF+ V
Sbjct: 28 VSGCGTKN-RDQSPEAEQDPRAPELLAMEGMEKFNQARYRQALEIFKDLKERYPFSSVGV 86
Query: 95 KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
+ L +A Y +Y +A L +E+ +P ++ + YV + +GM + Q I + D
Sbjct: 87 LAELKAADATYYLRRYDEALPLYQEFENNHPTNEAIPYVMFQIGMCHYQRIGTIDRDPAH 146
Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
+ +R+ + +SPY K A R+ +A E+ I +YL +Y A R
Sbjct: 147 ALNAIAAFTRLNRAFPDSPYRKEAEARTMAARDFMARHEMFIAGFYLNTKKYDQAERRLA 206
Query: 215 LVLANYSDAEHAEEAMARLV 234
++ NY ++E EA L
Sbjct: 207 YLIDNYPESELIPEAEEVLA 226
>gi|325955604|ref|YP_004239264.1| outer membrane assembly lipoprotein YfiO [Weeksella virosa DSM
16922]
gi|323438222|gb|ADX68686.1| outer membrane assembly lipoprotein YfiO [Weeksella virosa DSM
16922]
Length = 296
Score = 67.9 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 54/260 (20%), Positives = 92/260 (35%), Gaps = 17/260 (6%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
F + L + + + E++ A ++ + A E +
Sbjct: 1 MFKKVSLTFLVATMLTSC------NTQYNKAMKSSDKDEIFSIANTLFEQGKYDLALELY 54
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
N+ S F A A Y+ Y+ + L + + YP + YL S
Sbjct: 55 NRISTSFVGTEKAADIAYNIAQANYNDENYRLSGHLFKNFAGTYPLDHRAEDALYLSAFS 114
Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
Y + DQ +T + M + Y S +V A Y+ R +L K EI R Y
Sbjct: 115 YYKDSPRYNLDQTSTYNAIDEMQNFINTYPESEHVAQANEYIDELRGKLEKKAFEIARVY 174
Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM-----------DEAREV 249
K +Y AA F ++ ++ D+++ EEAM + + LA+ EA
Sbjct: 175 YKTMKYKAAGVAFDNMVDDFPDSKYREEAMLYSLRSKAELAMNFSRLEHKELRLQEALTQ 234
Query: 250 VSLIQERYPQGYWARYVETL 269
L YP+ + E +
Sbjct: 235 YKLFSRLYPESSFKSEAEKI 254
>gi|86144192|ref|ZP_01062528.1| lipoprotein protein, putative [Leeuwenhoekiella blandensis MED217]
gi|85829322|gb|EAQ47788.1| lipoprotein protein, putative [Leeuwenhoekiella blandensis MED217]
Length = 268
Score = 67.5 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 47/265 (17%), Positives = 91/265 (34%), Gaps = 19/265 (7%)
Query: 15 WAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFS 74
L K L I ++ L D Y A +
Sbjct: 1 MFLSLMKKTLVILLTVIS--LASCSEYQEALKSEDMGLK-------YSFADSLYDAGKYR 51
Query: 75 KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
K+ + + Q + A + + + A Y Y A + +++ YP+S +
Sbjct: 52 KSVKLWEQIVPAYRGKPQAERIMYLYADSHYQVEDYYLAGYQFDRFVSAYPDSDKAEEAQ 111
Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
Y +SYA++ + DQ T+ L Y+ + + Y S Y A + +L K
Sbjct: 112 YKAAVSYAELSPNYQLDQSETEKGLDYLQQFITAYPESEYAADASERIKELSIKLQKKSY 171
Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM----------D 244
+ + + K +Y AI F L++Y + E A +++ +
Sbjct: 172 MVAKGWHKIMDYPVAISAFDDFLSDYPGSPFREAAFFYKLDSQYQYGSKSIYVLVKPRLE 231
Query: 245 EAREVVSLIQERYPQGYWARYVETL 269
EA E+ + +P+G + + +
Sbjct: 232 EAIEMYETLIRYFPEGEYRAQADEI 256
Score = 36.7 bits (82), Expect = 3.6, Method: Composition-based stats.
Identities = 19/112 (16%), Positives = 40/112 (35%), Gaps = 8/112 (7%)
Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
+Y S + G+ Q + + +Y A +F ++ Y D++ AE
Sbjct: 49 KYRKSVKLWEQIVPAYRGKPQAERIMYLYADSHYQVEDYYLAGYQFDRFVSAYPDSDKAE 108
Query: 228 EAMARLVEAYVALA--------LMDEAREVVSLIQERYPQGYWARYVETLVK 271
EA + +Y L+ ++ + + YP+ +A +K
Sbjct: 109 EAQYKAAVSYAELSPNYQLDQSETEKGLDYLQQFITAYPESEYAADASERIK 160
>gi|1246513|emb|CAA94434.1| unkown [Escherichia coli K-12]
Length = 203
Score = 67.5 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 42/199 (21%), Positives = 84/199 (42%), Gaps = 10/199 (5%)
Query: 68 LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127
+++ N+ +A +PF +++ L + Y A + + +I P
Sbjct: 1 MQDGNWRQAITQLEALYNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTH 60
Query: 128 KNVDYVYYLVGMSYAQMIR----------DVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
N+DYV Y+ G++ + D + + S++V Y NS Y
Sbjct: 61 PNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRGYPNSQYTTD 120
Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
A + +++LA E + YY +RG +VA + R + +L +Y D + +A+ + AY
Sbjct: 121 ATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAY 180
Query: 238 VALALMDEAREVVSLIQER 256
+ + +A +V +I
Sbjct: 181 RQMQMNAQAEKVAKIIAAN 199
>gi|220904471|ref|YP_002479783.1| outer membrane assembly lipoprotein YfiO [Desulfovibrio
desulfuricans subsp. desulfuricans str. ATCC 27774]
gi|219868770|gb|ACL49105.1| outer membrane assembly lipoprotein YfiO [Desulfovibrio
desulfuricans subsp. desulfuricans str. ATCC 27774]
Length = 243
Score = 67.1 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 46/232 (19%), Positives = 95/232 (40%), Gaps = 4/232 (1%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
K +I +++ G + +E++E A + E+N+ +A E
Sbjct: 3 KKLLRSILLVMSMLMASGCGI----IDMIYLPPAEDTAQEIFEAANDAMSEKNYVRAVEL 58
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
+N+ +PF+ + L + +Y+ A+ +++ + +P + + YV Y GM
Sbjct: 59 YNKLRDTYPFSPYTIDAELSLGDAYFLDEEYELASESYKDFESLHPRHEAIPYVLYQTGM 118
Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
S + R + + Y +R+ + Y +SPY KGA ++ R +A E+ I
Sbjct: 119 SLLKQFRSIDRATTELQEAYDYFNRLHQMYPDSPYAKGAEEHMITCRKLMAEHELYIADV 178
Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
+ +Y A R++ ++ N+ D E A ++A+E
Sbjct: 179 FWHMKKYGPAWHRYEFIVKNFQDVPEVAEHAKEKSLAAYHYYKEEQAKETRQ 230
>gi|301064420|ref|ZP_07204845.1| outer membrane assembly lipoprotein YfiO [delta proteobacterium
NaphS2]
gi|300441502|gb|EFK05842.1| outer membrane assembly lipoprotein YfiO [delta proteobacterium
NaphS2]
Length = 240
Score = 67.1 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 55/232 (23%), Positives = 101/232 (43%), Gaps = 1/232 (0%)
Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
+ + +AVC+L S + + D E+ + + + F+KA
Sbjct: 1 MIMRSRQITGLMLAVCWLFLLSGCSVWNEFF-GPEDEITPAEIMNEGMADFNDGKFTKAI 59
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
E F + +P++ A + L A Y G+Y +A E+ +P +KNV YV Y
Sbjct: 60 ETFQKIKDRYPYSTFALTAELKMADALYEKGEYDEARDEYAEFEKMHPRNKNVPYVLYRQ 119
Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
GM Y + DQ T + R+++R+ S Y + AR V +LA E+ +G
Sbjct: 120 GMCYFNKSAAIDRDQSDTFKAREEFERLIKRFRKSDYTEQARRKVRECYIKLAEHELYVG 179
Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
+Y +G+Y A+ R+ ++ +Y D +A+ + + + ++ A E
Sbjct: 180 NFYFTKGKYETAMARYLYLIDHYPDVGQYYQALESIKKCKDRIKELNGAEET 231
>gi|167754110|ref|ZP_02426237.1| hypothetical protein ALIPUT_02401 [Alistipes putredinis DSM 17216]
gi|167658735|gb|EDS02865.1| hypothetical protein ALIPUT_02401 [Alistipes putredinis DSM 17216]
Length = 271
Score = 66.4 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 46/259 (17%), Positives = 94/259 (36%), Gaps = 17/259 (6%)
Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
+ G + V +Y+ A+ + Q +SKA F
Sbjct: 6 LYVLCTVCFAILAAGCNS-------VQQVLKSGRPDHMYQTALKHYQNQKWSKAAMLFEA 58
Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
+ + M+AF ++ Y+ A S+ +++ ++ S ++ ++ +SY
Sbjct: 59 AAPYYSGTMQEDSIAFMTAFCKFKTRDYEVATSMLDDFRRKFGRSVFLEDAEGILALSYF 118
Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
+ DQ T + ++ + Y NS R + +L K Y K
Sbjct: 119 YLAPGPTRDQTMTTQAIVAVNEYLAHYPNSSRSDEFREMDKILTQRLHDKTYLNAYTYYK 178
Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA----LMDEAREVVSLI----- 253
G Y +AI + L Y + H EE M +V++ LA +A +S +
Sbjct: 179 IGRYKSAIVALKNALKLYPTSSHREEIMYLIVKSGSKLADNSVQDKQADRYLSTLDSYYS 238
Query: 254 -QERYPQGYWARYVETLVK 271
+P+ ++ + ++ L +
Sbjct: 239 FVAEFPESHYLKELDRLAQ 257
>gi|91216488|ref|ZP_01253454.1| lipoprotein protein, putative [Psychroflexus torquis ATCC 700755]
gi|91185282|gb|EAS71659.1| lipoprotein protein, putative [Psychroflexus torquis ATCC 700755]
Length = 272
Score = 66.4 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 41/254 (16%), Positives = 83/254 (32%), Gaps = 10/254 (3%)
Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
+ + V + + +Y+K + K + ++KA F Q
Sbjct: 2 KSIVLLLLVVISFSSCSEYQKVLKKDEIALKYEMAKSMYDKGLEKGKGKYYTKAIRLFEQ 61
Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
+ M+A Y G Y + L E + YP S + +Y +SY
Sbjct: 62 ILPQYKGKPSGETVSYMNANSHYLLGDYFLSGYLFERFSKSYPNSVKAEEAHYKSAVSYY 121
Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
++ DQ T+ + + + Y + + + + + +++ K EI + Y
Sbjct: 122 EVSPIYSKDQEDTQTAMTKLQFYINTYPDGEFFEESNSKIQELSSKIEKKYYEISKQYHH 181
Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD----------EAREVVSL 252
Y +AI F + + + E+A E+ LA+ EA+
Sbjct: 182 TERYKSAIESFDNYILKFPGTKFREQAFFYKFESAYILAINSIVILVPERLAEAQTYYED 241
Query: 253 IQERYPQGYWARYV 266
+ Y +
Sbjct: 242 YSKYYTGTEISEQA 255
>gi|325103099|ref|YP_004272753.1| outer membrane assembly lipoprotein YfiO [Pedobacter saltans DSM
12145]
gi|324971947|gb|ADY50931.1| outer membrane assembly lipoprotein YfiO [Pedobacter saltans DSM
12145]
Length = 289
Score = 66.4 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 42/235 (17%), Positives = 84/235 (35%), Gaps = 10/235 (4%)
Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
+ + + Y++A+ +++++KA F+ + + A A+
Sbjct: 24 KSKFEKLRESSDTGRKYQEAIKLYNKKDYTKALSLFDDLVQRYRGRSEAEDLYYYYAYTN 83
Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
Y Y A + + YP S + ++ DQ T ++
Sbjct: 84 YKLKDYISARYHFKTFADTYPSSPKAEECRFMTAYCMYLESPVYSLDQDNTYKAIESFQL 143
Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
+ Y S V A + R++L K + +L G+Y AA+ F+ + ++ D +
Sbjct: 144 FINLYPQSDRVAEASKLIESLRDKLEQKSFANAKLFLDIGDYQAAVIAFRNSIKDFPDTK 203
Query: 225 HAEEAMARLVEAYVALALM----------DEAREVVSLIQERYPQGYWARYVETL 269
+AE+ +EA A EA + ERYP +++ L
Sbjct: 204 YAEQIDYLTIEAQYLYAKNSREIKQEERYQEAIDEYDRFMERYPNSKYSKDANKL 258
>gi|46580246|ref|YP_011054.1| competence protein [Desulfovibrio vulgaris str. Hildenborough]
gi|46449663|gb|AAS96313.1| competence protein, putative [Desulfovibrio vulgaris str.
Hildenborough]
Length = 260
Score = 66.4 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 54/217 (24%), Positives = 91/217 (41%), Gaps = 5/217 (2%)
Query: 13 EAWAYQLYKFALTIFFSIAVCF-LVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQ 71
W + K L A+ F L G Y +E+YE ++E+
Sbjct: 12 SIWNSSMRKTLLRAACMAALTFMLSGCGI----IDYFYLPPPEDTAQELYESGNDAMREK 67
Query: 72 NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
++ A + + + ++PF+ ++ L A + +Y AA +E+ T +P + +
Sbjct: 68 DYVAAAQAYTRLKDNYPFSPYTIEAELSLADAYFLDEEYPAAAEAYKEFETLHPRHQAIP 127
Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
YV Y VGM+ + V + QY R+ E Y + Y A ++ R LA
Sbjct: 128 YVLYQVGMARLKSFISVDRPVNNVQEAYQYFQRLRESYPGTEYAAKAEEHMKECRRLLAE 187
Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
+E+ I Y + G+Y AA R+ V N+ D HA E
Sbjct: 188 RELFIADVYWRTGKYGAAWQRYSFVRDNFKDVPHAVE 224
>gi|262197816|ref|YP_003269025.1| outer membrane assembly lipoprotein YfiO [Haliangium ochraceum DSM
14365]
gi|262081163|gb|ACY17132.1| outer membrane assembly lipoprotein YfiO [Haliangium ochraceum DSM
14365]
Length = 261
Score = 66.0 bits (158), Expect = 5e-09, Method: Composition-based stats.
Identities = 45/214 (21%), Positives = 93/214 (43%), Gaps = 10/214 (4%)
Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
++ Y K +L L+E+++ A +YF + FP++ A + L A ++ A Y QA
Sbjct: 32 TAQQNYSKGMLELEEKDWIAAVKYFAFVKQRFPYSKYAVLAELRMADAEFGAEHYLQAVD 91
Query: 116 LGEEYITQYPESKNVDYVYYLV----------GMSYAQMIRDVPYDQRATKLMLQYMSRI 165
+ +I +P + V Y + D +T + ++
Sbjct: 92 AFKLFIKFHPTHEQVVDGYAAFRVGAAYYELLPDDMWILPPSYEKDPSSTYDAERELATF 151
Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
+++Y +S Y + A+ + LAA E + ++Y R + + + R + +L Y+
Sbjct: 152 LKKYPDSAYHEEAKEMLAAVHAHLAAHEWYVAKFYWDREKPMGTVLRLRRLLDRYAGTRF 211
Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
+A+ L AY+ + + + ARE + E++P
Sbjct: 212 DGDALWLLGSAYMKVDMPERAREAWQTLIEQHPD 245
>gi|42520353|ref|NP_966268.1| competence lipoprotein ComL, putative [Wolbachia endosymbiont of
Drosophila melanogaster]
gi|42410091|gb|AAS14202.1| competence lipoprotein ComL, putative [Wolbachia endosymbiont of
Drosophila melanogaster]
Length = 235
Score = 65.6 bits (157), Expect = 6e-09, Method: Composition-based stats.
Identities = 67/238 (28%), Positives = 117/238 (49%), Gaps = 12/238 (5%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+YK +T F + F + + + E+YE+AV ++ + +A
Sbjct: 1 MYKTLITCFIFLICSFTQSYA-----------DDLEKTETELYEEAVELFDQKKYKQAIR 49
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
F++ +PF+ A K+ L+S Y+ G Y AAS +YI Y +++ YVYYL
Sbjct: 50 AFHKIEDLYPFSYWAMKAKLLSGVSHYNMGNYSSAASDMADYIYVYSNGEDLPYVYYLRV 109
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
+SY I V Q+ L+ + + + S YV + + ++ KE IG+
Sbjct: 110 LSYYMQINKVQLGQQTAYKTLELATEYINLFPGSEYVDEIKERAKLITEHISTKEYSIGK 169
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
+YL+RGEY+AAI RFQ + + Y D+++ +++ L+ A+ AL L EA + S++
Sbjct: 170 FYLRRGEYLAAIKRFQNMAS-YKDSKYFSKSINHLIAAHSALGLDLEAEQYESMLLAE 226
>gi|313157575|gb|EFR56991.1| outer membrane assembly lipoprotein YfiO [Alistipes sp. HGB5]
Length = 273
Score = 65.6 bits (157), Expect = 6e-09, Method: Composition-based stats.
Identities = 45/260 (17%), Positives = 100/260 (38%), Gaps = 17/260 (6%)
Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
F + I + G ++++ +Y KA+ + +++ +S+A F
Sbjct: 5 FLYAVCGVILITAFSGCAG-------INALLKSGQPDLIYSKALEYYQKEKWSRASTLFE 57
Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
+ +A +Y Y AA+L +++ ++ S ++ + + +
Sbjct: 58 GVQHYYSGTPREDSISFFNARCKYKNRDYDTAATLLDDFRRKFGRSAFIEDAEGMYALCF 117
Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
+ DQ T L ++ + RY +S ++ + T +L K Y
Sbjct: 118 YYLSPGPSRDQTMTGQALIAINEFMSRYPHSEQIENFKTINTELTQRLHDKAYLNAYTYY 177
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE----VVSLI---- 253
K G Y +AI + L Y ++ H EE M +V+A A A + ++++
Sbjct: 178 KIGRYKSAIVSLKNALKQYPESSHREEIMYLIVDASYRFASNSVAEKQTDRYLAMLDSYL 237
Query: 254 --QERYPQGYWARYVETLVK 271
+E +P+ + V+ + +
Sbjct: 238 SFKEEFPESKHIKEVDRMAQ 257
>gi|227536026|ref|ZP_03966075.1| conserved hypothetical lipoprotein [Sphingobacterium spiritivorum
ATCC 33300]
gi|227244139|gb|EEI94154.1| conserved hypothetical lipoprotein [Sphingobacterium spiritivorum
ATCC 33300]
Length = 304
Score = 65.6 bits (157), Expect = 6e-09, Method: Composition-based stats.
Identities = 44/256 (17%), Positives = 96/256 (37%), Gaps = 19/256 (7%)
Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
+ + F+ G + + + +++ Y++AV F +++ ++KA F+ + +
Sbjct: 14 LLLIVFISGCKSKFEKLRASNNLALK------YQEAVKFYEKKKYTKALALFDDLMQRYR 67
Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
A +A+ Y Y A +++ +P S + ++ +
Sbjct: 68 GQAEAEDLYYYTAYTNYRLKDYTSARYHFKQFAQTFPNSAKAEECRFMTAYCFYLDSPRS 127
Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR---GE 205
DQ T+ + + V Y S K A + R++L K + Y +
Sbjct: 128 SLDQENTRKAIDELQLFVNLYPESEKAKEASDLIQQLRDKLEKKAFSNAKLYYDMGLNDD 187
Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM----------DEAREVVSLIQE 255
Y AA+ + VL +Y D ++AEE +++A A + + +
Sbjct: 188 YKAAVIALENVLKDYPDTKYAEEINYLIIKAQFRYAEKSTPRRQEERYSKVIDYYQDFVD 247
Query: 256 RYPQGYWARYVETLVK 271
YP+ + V+ + K
Sbjct: 248 DYPESKHRKEVDDIRK 263
>gi|189502538|ref|YP_001958255.1| hypothetical protein Aasi_1196 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497979|gb|ACE06526.1| hypothetical protein Aasi_1196 [Candidatus Amoebophilus asiaticus
5a2]
Length = 267
Score = 65.6 bits (157), Expect = 7e-09, Method: Composition-based stats.
Identities = 47/260 (18%), Positives = 97/260 (37%), Gaps = 20/260 (7%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
+ I + L + YL Y++AV + +++ +A +
Sbjct: 1 MSYIKFIKIGLIGLALASCATHTHSGNYLSK----------YQQAVARYEAKDYYEALQL 50
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
F + + A+ + Y+ +A E + YP + Y+ G
Sbjct: 51 FKEVIPMLKGRKEIIPAQFYQAYAYFYQKSYKMSAYCFESFYKTYPRLAQAEEALYMQGY 110
Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
S I D+ DQ T+ L+ + + +Y + Y + A Y +N+L K + +
Sbjct: 111 SLYLSIPDIRLDQAVTEKALKTLQTYLNKYPSGTYQQEAHQYNDELQNKLMLKSFKAAKL 170
Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE----------V 249
Y + G Y AA+ Y ++ + EEA+ ++A AL E +E
Sbjct: 171 YYELGHYKAAVIALGNFREKYPESIYQEEALCLQIQAQYKWALGSEVKEQPDRLYAVVNY 230
Query: 250 VSLIQERYPQGYWARYVETL 269
+ +++P + + +E++
Sbjct: 231 YYIFLDKFPNSKYLKTLESV 250
>gi|332704216|ref|ZP_08424304.1| outer membrane assembly lipoprotein YfiO [Desulfovibrio africanus
str. Walvis Bay]
gi|332554365|gb|EGJ51409.1| outer membrane assembly lipoprotein YfiO [Desulfovibrio africanus
str. Walvis Bay]
Length = 243
Score = 65.6 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 42/196 (21%), Positives = 92/196 (46%)
Query: 27 FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86
FF VC L+ Y T E+++ + +++++ A EYF +
Sbjct: 6 FFIFTVCALIAASSGCGVIDYFFIPTPEETALELFQAGQEEMAQEDWADAVEYFTKLRDR 65
Query: 87 FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146
FPF+ ++ L+ A ++ GKY +A +E+ + +P + YV + +GM+ + +
Sbjct: 66 FPFSPYTVQAELLLANSHFNDGKYAEALQAYKEFESLHPSDPRIPYVLFQIGMANYKSMG 125
Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
+ Q +++ R+++ Y +S + A+ ++ + R +LA E+ + +Y + +
Sbjct: 126 SIDKPQHQAAEAVEFFRRLIQSYPDSEFAPKAKDHLLLARRRLAEHELFVADFYWRAERF 185
Query: 207 VAAIPRFQLVLANYSD 222
+A R+ V+ Y D
Sbjct: 186 GSAWERYSFVVEQYKD 201
>gi|294507597|ref|YP_003571655.1| hypothetical protein SRM_01782 [Salinibacter ruber M8]
gi|294343925|emb|CBH24703.1| putative TPR-repeat protein [Salinibacter ruber M8]
Length = 1064
Score = 65.6 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 35/232 (15%), Positives = 80/232 (34%), Gaps = 15/232 (6%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
+ + ++KA + + +A F + P +++L Y +Y
Sbjct: 491 APESVTAKVRFQKAWSLYRNGRYGEAGTEFQALADAHPETARGQEALFWGGDTFYQREQY 550
Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL----MLQYMSRIV 166
A + Y+ P++ Y + +Y + R P + + MS +
Sbjct: 551 GAARRQFQAYLDTSPDAPQRAGARYALAWTYFKQRRFEPAARSFRRFLDVYDRDSMSDVP 610
Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKE-----------VEIGRYYLKRGEYVAAIPRFQL 215
R + F + + AA + + GR G+ AA R +
Sbjct: 611 YRQDARLRLADCYFALKRYDDARAAYDRVDGAGVEYALYQGGRALYYAGQPGAARDRLRR 670
Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
+ ++ D+ +A+ RL + + + AR+ + + + +P+ A +
Sbjct: 671 FVDDFPDSPLRPDALYRLGDIHFQEQRYEAARDAFTQLLDDHPETARAAEAQ 722
Score = 61.3 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/220 (14%), Positives = 62/220 (28%), Gaps = 22/220 (10%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
+Y + +EQ + A + F Q D P A ++ Y+AG+
Sbjct: 676 PDSPLRPDALYRLGDIHFQEQRYEAARDAFTQLLDDHPETARAAEAQYAIGDTHYNAGEM 735
Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
+ A + YPE + + + + D+ +
Sbjct: 736 KDAVQAYRAVLETYPERPSASEAASSLFFALNAAGQQDRADKLIAAIA------------ 783
Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
N R +RG+ A+ F+ + S +A
Sbjct: 784 ----------NRVPDANMEDRLRYHRARAAYQRGDSKRALRLFRTFVRTTSTEARVPDAY 833
Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
L Y +EA+ + + ++YP + +
Sbjct: 834 YYLGLLYADTDQYEEAKNYLRQLTDQYPDSEYLSDASLRL 873
Score = 49.4 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 39/259 (15%), Positives = 78/259 (30%), Gaps = 30/259 (11%)
Query: 12 FEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQ 71
F++ ++ + +C L G +R + + + AV ++Q
Sbjct: 55 FDSHTLKMIPHWRR---FLLLCVLAGTALSPARAQQ-----EAPRPADAFGGAVELYQQQ 106
Query: 72 NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
+ A F + A ++L + A + G L +YP
Sbjct: 107 LYPDAATAFATFRQAHASHVAAPQALYLEARAALAQGDDAGTRRLLSRLQREYPSHPRAR 166
Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
+ Y + + ++ A
Sbjct: 167 TARLGLAQYYLDQGNPDRAKSQLQTIA----------------------TAPSRPDEGAR 204
Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
+GR +G AA+P F+ V + Y +AE A A+ V L D A
Sbjct: 205 ALYLLGRTEQNQGNPNAALPYFKQVYSRYPNAELAPAALYARGVTQVRLERYDRATASFE 264
Query: 252 LIQERYPQGYWARYVETLV 270
+ E++P ++ + T++
Sbjct: 265 RLGEQFPDSPFSENLGTIL 283
Score = 42.9 bits (98), Expect = 0.048, Method: Composition-based stats.
Identities = 35/232 (15%), Positives = 68/232 (29%), Gaps = 30/232 (12%)
Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
+ +Y +A L + + + ++ R++P AR + L A G +A S
Sbjct: 129 PQALYLEARAALAQGDDAGTRRLLSRLQREYPSHPRARTARLGLAQYYLDQGNPDRAKSQ 188
Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
+ T ++ +Q L Y ++ RY N+
Sbjct: 189 LQTIATAPSRPDEGARA--------LYLLGRTEQNQGNPNAALPYFKQVYSRYPNAELAP 240
Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA---IPRFQLVLANYSDAEHAEEA---- 229
A + V + +L + + ++ + ++ Y E A
Sbjct: 241 AALYARGVTQVRLERYDRATASFERLGEQFPDSPFSENLGTILGEVYYRVGQYENAATEL 300
Query: 230 ---------------MARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
+ L E Y AL ++A LI E P +
Sbjct: 301 QRRLPDLTGSTRARTLFLLGETYSALGRREDATTQYRLILEELPNSSYTTPA 352
Score = 35.5 bits (79), Expect = 8.4, Method: Composition-based stats.
Identities = 29/233 (12%), Positives = 63/233 (27%), Gaps = 16/233 (6%)
Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ------- 104
T+ R Y +L+ + +A Y Q + +P + + L +
Sbjct: 825 TEARVPDAYYYLGLLYADTDQYEEAKNYLRQLTDQYPDSEYLSDASLRLGEIYLEEGANE 884
Query: 105 ------YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
+A + + + I +
Sbjct: 885 QAAAAYRTAAEQDDTRDELRAQARYGQSQALLQLGRTSAADTLLSQILEAEPQGPLRNAA 944
Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRN--QLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
+ R+ E + V + A +GR ++G AI + +
Sbjct: 945 RLGLGRVREEQGRTDEALDLYRRVIRASDGETGAEALYRLGRQLRRQGNPQTAIRELERM 1004
Query: 217 LANYSDAEHAE-EAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
+ ++ E A+ AY A +A ++ +Q+ Y +A
Sbjct: 1005 PSLFAGHPEWEARALLEQARAYRARGETGQAVQLYDEVQQAYGGTPFAETARE 1057
>gi|218779658|ref|YP_002430976.1| hypothetical protein Dalk_1811 [Desulfatibacillum alkenivorans AK-01]
gi|218761042|gb|ACL03508.1| TPR repeat-containing protein [Desulfatibacillum alkenivorans AK-01]
Length = 1059
Score = 65.2 bits (156), Expect = 8e-09, Method: Composition-based stats.
Identities = 33/229 (14%), Positives = 67/229 (29%), Gaps = 15/229 (6%)
Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
Y A+ + +++N+ + +P + A + + +Y QA
Sbjct: 827 ETAYHLAMCYYRQKNWPATLKELESALEKYPDSPRAPEIRYHIGLCKMEQKRYGQARQAF 886
Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK------------LMLQYMSRI 165
+ ++P + Y MS + R + + +
Sbjct: 887 NRTVEEFPGTVWGRLAAYHHAMSLYREGRYKDAQESLDRLLSMAPERGLAAEAFYHRGLC 946
Query: 166 VERYTNSPYVKGARFYVTVGRN---QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
+ N+ + V + G + ++ +L Y
Sbjct: 947 LMLQGNNQEARLDFRIVRERYEDALWAEHALYQTGLSFFNEQDFDNMAASMTELLRQYPQ 1006
Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
A EA L A++ L L +AR + + ER P WA +K
Sbjct: 1007 TALAPEAWYHLGLAHMKLNLPGKARLDFTNVVERSPDSPWANQARDRLK 1055
>gi|83815162|ref|YP_445705.1| TPR repeat-containing protein [Salinibacter ruber DSM 13855]
gi|83756556|gb|ABC44669.1| Tetratricopeptide repeat family [Salinibacter ruber DSM 13855]
Length = 1064
Score = 65.2 bits (156), Expect = 8e-09, Method: Composition-based stats.
Identities = 35/232 (15%), Positives = 80/232 (34%), Gaps = 15/232 (6%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
+ + ++KA + + +A F + P +++L Y +Y
Sbjct: 491 APESVTAKVRFQKAWSLYRNGRYGEAGTEFQALADAHPETARGQEALFWGGDTFYQREQY 550
Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL----MLQYMSRIV 166
A + Y+ P++ Y + +Y + R P + + MS +
Sbjct: 551 GAARRQFQAYLDTSPDAPQRAGARYALAWTYFKQRRFEPAARSFRRFLDVYDRDSMSDVP 610
Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKE-----------VEIGRYYLKRGEYVAAIPRFQL 215
R + F + + AA + + GR G+ AA R +
Sbjct: 611 YRQDARLRLADCYFALKRYDDARAAYDRVDGAGVEYALYQGGRALYYAGQPGAARDRLRR 670
Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
+ ++ D+ +A+ RL + + + AR+ + + + +P+ A +
Sbjct: 671 FVDDFPDSPLRPDALYRLGDIHFQEQRYEAARDAFTQLLDDHPETARAAEAQ 722
Score = 61.3 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/220 (14%), Positives = 63/220 (28%), Gaps = 22/220 (10%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
+Y + +EQ + A + F Q D P A ++ Y+AG+
Sbjct: 676 PDSPLRPDALYRLGDIHFQEQRYEAARDAFTQLLDDHPETARAAEAQYAIGDTHYNAGEM 735
Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
+ A + YPES + + + + D+ +
Sbjct: 736 KDAVQAYRAVLETYPESPSASEAASSLFFALNAAGQQDRADKLIAAIA------------ 783
Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
N R +RG+ A+ F+ + S +A
Sbjct: 784 ----------NRVPDANMEDRLRYHRARAAYQRGDSKRALRLFRTFVRTTSTEARVPDAY 833
Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
L Y +EA+ + + ++YP + +
Sbjct: 834 YYLGLLYADTDQYEEAKNYLRQLTDQYPDSEYLSDASLRL 873
Score = 49.4 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 39/259 (15%), Positives = 78/259 (30%), Gaps = 30/259 (11%)
Query: 12 FEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQ 71
F++ ++ + +C L G +R + + + AV ++Q
Sbjct: 55 FDSHTLKMIPHWRR---FLLLCVLAGTALSPARAQQ-----EAPRPADAFGGAVELYQQQ 106
Query: 72 NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
+ A F + A ++L + A + G L +YP
Sbjct: 107 LYPDAATAFATFRQAHASHVAAPQALYLEARAALAQGDDAGTRRLLSRLQREYPSHPRAR 166
Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
+ Y + + ++ A
Sbjct: 167 TARLGLAQYYLDQGNPDRAKSQLQTIA----------------------TAPSRPDEGAQ 204
Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
+GR +G AA+P F+ V + Y +AE A A+ V L D A
Sbjct: 205 ALYLLGRTEQNQGNPNAALPYFKQVYSRYPNAELAPAALYARGVTQVRLERYDRATASFE 264
Query: 252 LIQERYPQGYWARYVETLV 270
+ E++P ++ + T++
Sbjct: 265 RLGEQFPDSPFSENLGTIL 283
Score = 47.5 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 30/208 (14%), Positives = 57/208 (27%), Gaps = 22/208 (10%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
S + Y A + K++ F A F + + ++ A
Sbjct: 564 SPDAPQRAGARYALAWTYFKQRRFEPAARSFRRFLDVYDRDSMSDVPYRQDA-------- 615
Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
+ A D V Y + R V+ +
Sbjct: 616 RLRLADCYFALKRYDDARAAYDRVDGAGVEYALYQGGRALYYAGQPGAARDRLRRFVDDF 675
Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
+SP A + + G + + Y AA F +L ++ + A EA
Sbjct: 676 PDSPLRPDALYRL--------------GDIHFQEQRYEAARDAFTQLLDDHPETARAAEA 721
Query: 230 MARLVEAYVALALMDEAREVVSLIQERY 257
+ + + M +A + + E Y
Sbjct: 722 QYAIGDTHYNAGEMKDAVQAYRAVLETY 749
Score = 42.9 bits (98), Expect = 0.047, Method: Composition-based stats.
Identities = 35/232 (15%), Positives = 68/232 (29%), Gaps = 30/232 (12%)
Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
+ +Y +A L + + + ++ R++P AR + L A G +A S
Sbjct: 129 PQALYLEARAALAQGDDAGTRRLLSRLQREYPSHPRARTARLGLAQYYLDQGNPDRAKSQ 188
Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
+ T ++ +Q L Y ++ RY N+
Sbjct: 189 LQTIATAPSRPDEGAQA--------LYLLGRTEQNQGNPNAALPYFKQVYSRYPNAELAP 240
Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA---IPRFQLVLANYSDAEHAEEA---- 229
A + V + +L + + ++ + ++ Y E A
Sbjct: 241 AALYARGVTQVRLERYDRATASFERLGEQFPDSPFSENLGTILGEVYYRVGQYENAATEL 300
Query: 230 ---------------MARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
+ L E Y AL ++A LI E P +
Sbjct: 301 QRRLPDLTGSTRARTLFLLGETYSALGRREDATTQYRLILEELPNSSYTTPA 352
Score = 35.5 bits (79), Expect = 8.8, Method: Composition-based stats.
Identities = 29/233 (12%), Positives = 63/233 (27%), Gaps = 16/233 (6%)
Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ------- 104
T+ R Y +L+ + +A Y Q + +P + + L +
Sbjct: 825 TEARVPDAYYYLGLLYADTDQYEEAKNYLRQLTDQYPDSEYLSDASLRLGEIYLEEGANE 884
Query: 105 ------YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
+A + + + I +
Sbjct: 885 QAAAAYRTAAEQDDTRDELRAQARYGQSQALLQLGRTSAADTLLSQILEAEPQGPLRNAA 944
Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRN--QLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
+ R+ E + V + A +GR ++G AI + +
Sbjct: 945 RLGLGRVREEQGRTDEALDLYRRVIRASDGETGAEALYRLGRQLRRQGNPQTAIRELERM 1004
Query: 217 LANYSDAEHAE-EAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
+ ++ E A+ AY A +A ++ +Q+ Y +A
Sbjct: 1005 PSLFAGHPEWEARALLEQARAYRARGETGQAVQLYDEVQQAYGGTPFAETARE 1057
>gi|226227369|ref|YP_002761475.1| hypothetical protein GAU_1963 [Gemmatimonas aurantiaca T-27]
gi|226090560|dbj|BAH39005.1| hypothetical protein [Gemmatimonas aurantiaca T-27]
Length = 287
Score = 65.2 bits (156), Expect = 9e-09, Method: Composition-based stats.
Identities = 36/237 (15%), Positives = 80/237 (33%), Gaps = 9/237 (3%)
Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
+ + G D +++ ++ + + + A F + +
Sbjct: 5 LMLLLSVAAAVAGCS-------RGFRPQDFATPEALFKASLQEFERKKWDNAQLGFERLT 57
Query: 85 RD-FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
D + + A ++ AA E +P+ G SY
Sbjct: 58 NDLSSRDPLLAPAYFYLALTHERKHEFLLAAQAFERVTDGFPDDTLAPTAMLGSGRSYQS 117
Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
+ R D + + + ++ Y ++ V+ A+ ++ A K+ G +Y++
Sbjct: 118 IWRRPSLDPEQGQKAVSVLRALLSSYPDAKEVEDAKARISTLEEWFAEKDYMTGVHYVRV 177
Query: 204 GE-YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
AI F+ V+ Y + A + RL E Y + ++A E + + + YP
Sbjct: 178 RRAIDPAIIYFKDVVTTYPTTKAARLSWLRLNELYTKIRWKEDAAETCTAMWKAYPG 234
>gi|323697686|ref|ZP_08109598.1| outer membrane assembly lipoprotein YfiO [Desulfovibrio sp. ND132]
gi|323457618|gb|EGB13483.1| outer membrane assembly lipoprotein YfiO [Desulfovibrio
desulfuricans ND132]
Length = 242
Score = 65.2 bits (156), Expect = 9e-09, Method: Composition-based stats.
Identities = 54/221 (24%), Positives = 94/221 (42%), Gaps = 5/221 (2%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
+ L + + L G +E+YE V + E+++ A +Y
Sbjct: 1 MRRLLAPVLIVVLLSLAGCMW----IDSYFLPPPEDTAQELYEAGVAAMDEKDYGDAQDY 56
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
F++ FPF+ + K L + Y A +E+ +P ++N+ YV Y +
Sbjct: 57 FSKLKDRFPFSPYSLKGELALGDAYFLDEDYVHALDAYKEFEALHPSNENIPYVLYQIAN 116
Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
+ M R + Q K L+Y+ R+VE Y S Y + A+ + R LA EV + +
Sbjct: 117 TDVSMFRTIDRRQENVKEGLEYLYRLVETYPKSQYAEAAKEMILKSRRILAEHEVFVADF 176
Query: 200 YLKRGEYVAAIPRFQLVLANYSDAE-HAEEAMARLVEAYVA 239
+ + +Y A R+Q V+ N+SD + AM R +Y
Sbjct: 177 FWRTEQYGPAWHRYQYVVENFSDIPDLRDYAMKRAEYSYFE 217
>gi|300771724|ref|ZP_07081599.1| conserved hypothetical lipoprotein [Sphingobacterium spiritivorum
ATCC 33861]
gi|300761713|gb|EFK58534.1| conserved hypothetical lipoprotein [Sphingobacterium spiritivorum
ATCC 33861]
Length = 304
Score = 64.8 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 44/256 (17%), Positives = 95/256 (37%), Gaps = 19/256 (7%)
Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
+ + F+ G + + + +++ Y++AV F +++ ++KA F+ + +
Sbjct: 14 LLLIVFISGCKSKFEKLRASNNLALK------YQEAVKFYEKKKYTKALALFDDLMQRYR 67
Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
A +A+ Y Y A +++ +P S + ++ +
Sbjct: 68 GQAEAEDLYYYTAYTNYRLKDYTSARYHFKQFAQTFPNSAKAEECRFMTAYCFYLDSPRS 127
Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR---GE 205
DQ T+ + + V Y S K A + R++L K + Y +
Sbjct: 128 SLDQENTRKAIDELQLFVNLYPESEKAKEAADLIQQLRDKLEKKAFSNAKLYYDMGLNDD 187
Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM----------DEAREVVSLIQE 255
Y AA+ + VL Y D ++AEE +++A A + + +
Sbjct: 188 YKAAVIALENVLKEYPDTKYAEEINYLIIKAQFRYAEKSTPRRQEERYSKVIDYYQDFVD 247
Query: 256 RYPQGYWARYVETLVK 271
YP+ + V+ + K
Sbjct: 248 DYPESKHRKEVDDIRK 263
>gi|89891617|ref|ZP_01203121.1| conserved hypothetical lipoprotein [Flavobacteria bacterium BBFL7]
gi|89516164|gb|EAS18827.1| conserved hypothetical lipoprotein [Flavobacteria bacterium BBFL7]
Length = 264
Score = 64.8 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 44/256 (17%), Positives = 92/256 (35%), Gaps = 17/256 (6%)
Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85
I + V + D+ + + L + + KA F+Q
Sbjct: 5 IVLLLLAIMAVSCGPYQTALKSTDNEVKLAMIDTL-------LNREKYGKAVNLFDQIIP 57
Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
+ A + A Y Y +A E ++ +P S++ ++ Y+ S+ M
Sbjct: 58 QYRGTDKAEALSIKYAKALYETKDYPNSAYQYERFVQSHPASEDREFAAYMGAKSHYHMS 117
Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
Q T L + + Y + YV+ A V+ R +L K EI + Y R
Sbjct: 118 AVYSKSQVNTDRALAKLQDYINLYPDGEYVEEANDLVSELRYKLDRKAYEIAKNYHHRSR 177
Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM----------DEAREVVSLIQE 255
Y+ AI F+ + + ++ ++A L+++ A+ + A + +
Sbjct: 178 YIPAIKSFENFIIQHPGSDFMDDAQFYLIDSQYLYAIKSREELVPERLEAATKYYNTFVS 237
Query: 256 RYPQGYWARYVETLVK 271
R+P + + +++
Sbjct: 238 RFPASEYREDADEIME 253
>gi|332664680|ref|YP_004447468.1| outer membrane assembly lipoprotein YfiO [Haliscomenobacter
hydrossis DSM 1100]
gi|332333494|gb|AEE50595.1| outer membrane assembly lipoprotein YfiO [Haliscomenobacter
hydrossis DSM 1100]
Length = 284
Score = 64.8 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 45/256 (17%), Positives = 93/256 (36%), Gaps = 16/256 (6%)
Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
+ ++ L G + + + +Y KA+ + + + + K+
Sbjct: 10 FLVLSLMSFLLLNGC------KSEFEQIRTSGDVKNIYAKALEYYQAEEWQKSQTLLEMI 63
Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
+ A A+ Y+ Y A+ + + Y S + ++ + Q
Sbjct: 64 IPNVRGTKEAEDVFFKYAYTFYNLQSYTSASYHFKTFANTYGASPLREESEFMSAYAQYQ 123
Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
DQ T ++ V Y +S V + R++L K E G+ Y
Sbjct: 124 ESPTFRLDQGNTGQAIEEFEFFVNSYPDSKRVAECNKLIDQLRSKLETKAFEEGKLYFNL 183
Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA----------LMDEAREVVSLI 253
Y +A+ F+ +L ++ + ++AEE ++ +Y LA E R + +
Sbjct: 184 RYYQSAVSSFENLLKDFPETKNAEEVRLMILRSYYDLAVNSILDKREERFKECRRLAAEF 243
Query: 254 QERYPQGYWARYVETL 269
ERYP+ R V+++
Sbjct: 244 LERYPKSVSLREVQSI 259
>gi|114321550|ref|YP_743233.1| DNA uptake lipoprotein-like protein [Alkalilimnicola ehrlichii
MLHE-1]
gi|114227944|gb|ABI57743.1| DNA uptake lipoprotein-like protein [Alkalilimnicola ehrlichii
MLHE-1]
Length = 245
Score = 64.8 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 49/228 (21%), Positives = 85/228 (37%), Gaps = 9/228 (3%)
Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
G S D E Y V L E + + A E F + A +
Sbjct: 17 SGCATTSGPDDRRAG-----TAAEQYRAGVAALDEDDRAAARERFEALIERHATSRHAGQ 71
Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV----PYD 151
+ A++ Y AG+ A +P+ ++ Y Y+ M+ Q D D
Sbjct: 72 ARAELAWLHYRAGELDAAREQASRMAETHPDHPSLPYALYVAAMAAEQQWEDSLARGEPD 131
Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
QR + +V+ + A ++ R +A E+++ R L+ G A+
Sbjct: 132 QRLARRAFADYRAVVDLDAEDRHAGLALEAMSALREAIARHELDLARTRLEDGAADEALD 191
Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
R + V +Y +E +AMA + A +L D+A EV +++ P
Sbjct: 192 RARYVGEHYPRSETLGDAMALQINALESLGEQDKAGEVRRMLRLHQPD 239
>gi|302342571|ref|YP_003807100.1| outer membrane assembly lipoprotein YfiO [Desulfarculus baarsii DSM
2075]
gi|301639184|gb|ADK84506.1| outer membrane assembly lipoprotein YfiO [Desulfarculus baarsii DSM
2075]
Length = 280
Score = 64.8 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 52/245 (21%), Positives = 98/245 (40%), Gaps = 10/245 (4%)
Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE--------KAVLF 67
+ + + A+ + G L E ++ +A
Sbjct: 1 MSKALRLIIAAGMIAALGLVGGCSTVKGWVGNLGFGGGGDGAVEAFDTPAQVLATEAEQA 60
Query: 68 LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127
+E N+ +A E F Q FP++ A + L + +Y +A E++I +P++
Sbjct: 61 YQEGNYEEAAETFQQLKDRFPYSKFALLADLRLGDAYFKDERYDEAILAYEDFIRLHPKN 120
Query: 128 KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
+ V Y Y +GM Y + + D + ++ +++ Y + + A
Sbjct: 121 EGVPYAMYQIGMVYHEQMLTPDRDPTFARKAMEAFQKLMREYPKNEWSVKAVPRFQESAA 180
Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY--VALALMDE 245
+ AA ++ +G++Y G+Y AAI RF+ V+ Y D +EAM+ L A L +E
Sbjct: 181 RAAAHDLAVGKFYYNTGKYPAAIYRFKRVMTQYPDVGLYDEAMSALQRAQADYDEQLAEE 240
Query: 246 AREVV 250
A E
Sbjct: 241 AEEYA 245
>gi|120435007|ref|YP_860693.1| hypothetical protein GFO_0648 [Gramella forsetii KT0803]
gi|117577157|emb|CAL65626.1| conserved hypothetical protein [Gramella forsetii KT0803]
Length = 279
Score = 64.8 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 46/269 (17%), Positives = 93/269 (34%), Gaps = 12/269 (4%)
Query: 14 AWAYQLYKFALT--IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQ 71
+ Q++ + I + + ++ ++Y + +
Sbjct: 1 MYFCQMFLRIMKKGILVLGLLMVTLSCSEYQKLLKNEETAPKYTAAEQLYNEGKEEDSNK 60
Query: 72 NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
KA + Q ++ + + + A Y G Y A + ++ YP+S+ +
Sbjct: 61 KLRKALKLLEQIEPEYRGKPQGERIVFILADTYYQLGDYFNAPFQFDRFLQLYPKSQKAE 120
Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
Y SY DQ T ++ + + Y + + A T +L
Sbjct: 121 EAGYKSASSYFYRSPKYNLDQTDTHKAIEELQVYLNTYPEGEFNEEANKMATELLVKLEK 180
Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM-------- 243
K+ EI + Y Y AAI F +A++ + E A ++ LA+
Sbjct: 181 KDYEIAKQYHHTEYYKAAIASFNNFIADHPGSPFREAAYFYRFDSAYRLAINSFEVLMEE 240
Query: 244 --DEAREVVSLIQERYPQGYWARYVETLV 270
+EARE ++ YP+G + +E +
Sbjct: 241 RLNEAREFYKSYKKYYPEGEYTPQLEDAL 269
>gi|320355040|ref|YP_004196379.1| outer membrane assembly lipoprotein YfiO [Desulfobulbus propionicus
DSM 2032]
gi|320123542|gb|ADW19088.1| outer membrane assembly lipoprotein YfiO [Desulfobulbus propionicus
DSM 2032]
Length = 291
Score = 64.8 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 41/207 (19%), Positives = 83/207 (40%), Gaps = 4/207 (1%)
Query: 31 AVCFLVGWERQSSRDVYLD----SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86
A L G + + + + ++ +A + F +
Sbjct: 24 AAMTLSGCSTFDGMFSAFSFGEEEEPESLPPETLIVQGMDAYNVGDYGEAIKNFKIILDE 83
Query: 87 FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146
PF+ A + L +A Y +Y +A +L + + ++P ++ + YV + VGM +
Sbjct: 84 HPFSAQAMLAELKAADANYYNKQYAEAKTLYKSFEERHPTNEAIPYVMFQVGMCDYRRSD 143
Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
+ D + ++ +R++ Y SPY K A+ + + L E + +Y++
Sbjct: 144 RIDRDASGPQEAIKSFTRLINAYPQSPYAKEAKAKIIECKEFLVNHEYMVAVFYVRTDRQ 203
Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARL 233
A R + +LA Y D+ A +A A L
Sbjct: 204 EEAKHRLKYLLAMYPDSNLAPQAKALL 230
>gi|326334355|ref|ZP_08200568.1| outer membrane assembly lipoprotein YfiO [Capnocytophaga sp. oral
taxon 338 str. F0234]
gi|325693439|gb|EGD35365.1| outer membrane assembly lipoprotein YfiO [Capnocytophaga sp. oral
taxon 338 str. F0234]
Length = 266
Score = 64.0 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 51/264 (19%), Positives = 86/264 (32%), Gaps = 17/264 (6%)
Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
K + I D Y+ A ++ +++++
Sbjct: 1 MNMKGKVIAIMLIISLAFSACGEYQKALKTEDYELK-------YKVAKSLYEKGDYARSM 53
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
+ + ++L M A Y KY AA E + YP S+ + V +L
Sbjct: 54 RLLEKVVGFYIGRPQGEEALYMYADSYYKRKKYLLAAYQYERFTKNYPRSEKAEQVLFLQ 113
Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
G Y DQ T L + ++RY NS ++ A V +L K EI
Sbjct: 114 GKCYFLESPKYSLDQEGTYKALDALQEYIDRYPNSENLREANNMVLELLTKLQRKSFEIA 173
Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM----------DEAR 247
+ Y K +Y AAI F L + EEA+ + LA +EA+
Sbjct: 174 KGYDKIRDYQAAIKSFDNFLIENPGSVFREEALYYRFHSAYELAKNSVKSKEKQRFEEAK 233
Query: 248 EVVSLIQERYPQGYWARYVETLVK 271
+P + + + +
Sbjct: 234 NQYENFVRIFPDSDFKGRADKMYQ 257
>gi|225874148|ref|YP_002755607.1| tetratricopeptide repeat protein [Acidobacterium capsulatum ATCC
51196]
gi|225791664|gb|ACO31754.1| tetratricopeptide repeat protein [Acidobacterium capsulatum ATCC
51196]
Length = 549
Score = 64.0 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 42/247 (17%), Positives = 91/247 (36%), Gaps = 22/247 (8%)
Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
L ++ + E++ KA+ +++ + A +P + A ++ L A +
Sbjct: 42 NPLANLKTKQPDAELFNKAMKSMRKGRYDVARLELETLLNTYPDSEYAMRAKLAVADSWF 101
Query: 106 SAGKY---QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
G +QA + +++IT +P + VG Y + D Q
Sbjct: 102 KEGGTAALEQAEAEYKDFITFFPNTPEAAEAQMKVGDIYYMQMERPDRDPTNAVAAEQQY 161
Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
++E++ +S + A+ + + LA + E+G YY ++ AI R + V Y
Sbjct: 162 RTMIEQFPDSTLIPEAKQKLRNVQEVLAQAQFEVGTYYSTTEDWPGAIARLETVADLYPL 221
Query: 223 AEHAEEAMARLVEAY-------VALALMDEAR------------EVVSLIQERYPQGYWA 263
+ + + + Y + + +A+ + S I E+YP A
Sbjct: 222 YSKVDADLLLMGDDYANEAQAVSRMRMPAKAKTELLNYYNGRAADAWSAIVEKYPMSPNA 281
Query: 264 RYVETLV 270
+ +
Sbjct: 282 ENAKDRL 288
>gi|284036226|ref|YP_003386156.1| outer membrane assembly lipoprotein YfiO [Spirosoma linguale DSM
74]
gi|283815519|gb|ADB37357.1| outer membrane assembly lipoprotein YfiO [Spirosoma linguale DSM
74]
Length = 299
Score = 63.7 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 47/266 (17%), Positives = 94/266 (35%), Gaps = 21/266 (7%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
+ I I V FL+G S+ Y+ A+ + K+ ++ +A F
Sbjct: 4 RHIGKILLGIGVVFLLGSCSPFSKLQ------KSGSDDAKYKGALEYYKKGDWYRAGLLF 57
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
+ + + + A+ QY +Y +A+L +++ + S+ Y+ S
Sbjct: 58 EELIPVLKGSNESEMAQFYYAYTQYQQQQYLLSATLFKKFYETFARSEYAQEAMYMYAYS 117
Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
+ DQ T + + Y +S Y + + + R +L K E + Y
Sbjct: 118 LYKDTPSFNLDQSNTLTATSALQDFINAYPDSKYKEESTKLILELRGKLERKAYEKAKLY 177
Query: 201 LKRG-----EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM----------DE 245
K Y +A+ ++ D+ + EE V+A +LA E
Sbjct: 178 YKTSGFNIASYKSAVIAINNFQKDFPDSGYNEELAYLKVDAEFSLAQNSLETKQKERYQE 237
Query: 246 AREVVSLIQERYPQGYWARYVETLVK 271
A ++YP + + E + +
Sbjct: 238 AISYHQAFVDKYPNSQFLKQSERMFE 263
>gi|319955738|ref|YP_004167005.1| outer membrane assembly lipoprotein yfio [Cellulophaga algicola DSM
14237]
gi|319424398|gb|ADV51507.1| outer membrane assembly lipoprotein YfiO [Cellulophaga algicola DSM
14237]
Length = 274
Score = 63.7 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 43/242 (17%), Positives = 89/242 (36%), Gaps = 16/242 (6%)
Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
V + Y+ A F + +++ +A Q + + + + A Y
Sbjct: 22 SEYQKVLKKDDVKAKYDMAEKFYEAKDYKRANRLLEQITPKYIGKPQGERVMFFLADSYY 81
Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
Y A E ++ YP+S +LV SY + D DQ T LQ +
Sbjct: 82 QIKDYNTAGYQFERFLKSYPKSDKAQESGFLVAKSYYMLSPDYSLDQTDTDKALQKLQTF 141
Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR------FQLVLAN 219
+ + S ++ A + K +EIG+ + K GEY + +
Sbjct: 142 INTFPESEFMPEANQMAKDLTQKKELKAIEIGKQFTKLGEYYTLDFSISAAAAMDNFILD 201
Query: 220 YSDAEHAEEAMARLVEAYVALALM----------DEAREVVSLIQERYPQGYWARYVETL 269
+ + + E+A+ ++A LAL EA+ + +++ +P+ + + +
Sbjct: 202 FPGSIYKEDALFYKMKALSNLALNSTEQKKKERLQEAKTAYNTLKKNFPETQFEKDANNM 261
Query: 270 VK 271
++
Sbjct: 262 ME 263
>gi|225677404|ref|ZP_03788371.1| competence lipoprotein ComL, putative [Wolbachia endosymbiont of
Muscidifurax uniraptor]
gi|225590548|gb|EEH11808.1| competence lipoprotein ComL, putative [Wolbachia endosymbiont of
Muscidifurax uniraptor]
Length = 235
Score = 63.7 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 67/238 (28%), Positives = 116/238 (48%), Gaps = 12/238 (5%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+YK +T F + F + + + E+YE+AV ++ + +A
Sbjct: 1 MYKTLITCFIFLICSFTQSYA-----------DDLEKTETELYEEAVELFDQKKYKQAVR 49
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
F++ +PF+ A K+ L+S Y+ G Y AAS +YI Y +++ YVYYL
Sbjct: 50 AFHKIEDLYPFSYWAMKAKLLSGVSHYNMGNYSSAASDMADYIYVYSNGEDLPYVYYLRV 109
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
+SY I V Q+ L+ + + + S YV + + ++ KE IG+
Sbjct: 110 LSYYMQINKVQLGQQTAYKTLELATEYINLFPGSEYVGEIKEKAKLITEHISTKEYSIGK 169
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
+YLKRGEY+AAI RFQ + +Y D+++ +++ L+ A+ AL L E + S++
Sbjct: 170 FYLKRGEYLAAIKRFQNI-ESYKDSKYFSKSINYLIAAHSALGLDLEVEQYESMLLAE 226
>gi|297170256|gb|ADI21293.1| DNA uptake lipoprotein [uncultured gamma proteobacterium
HF0010_09F21]
Length = 240
Score = 63.3 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 56/229 (24%), Positives = 98/229 (42%), Gaps = 16/229 (6%)
Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
++ + +Y A + +N++ A E + R +PF A ++
Sbjct: 18 CSSNDKKEE------ADTPEVNLYNLAQSRISSRNYTGAAEALFRIERSYPFGVYAEQAR 71
Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
+V Y G + + + E++I YP + N+DY Y++ GM+ + D L
Sbjct: 72 ADLIYVHYMTGNFDASYAAAEKFIRLYPRNTNIDYAYFMKGMTGYYADDGLFSDFLTLNL 131
Query: 158 M----------LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
++ + RY S YV AR + RN +A+ E++ YYLKRG YV
Sbjct: 132 AKRDVTGAKKSFADLTEFLIRYPESDYVDEARSRLVFLRNLIASNELDSAEYYLKRGAYV 191
Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
AA+ R ++ N + + A+ + EAY L D A +V +L +
Sbjct: 192 AALNRATYIIKNMPNTSEKKRALKIMKEAYTKLGYKDYADKVKALEEVN 240
>gi|295135083|ref|YP_003585759.1| nuclear transition protein [Zunongwangia profunda SM-A87]
gi|294983098|gb|ADF53563.1| nuclear transition protein [Zunongwangia profunda SM-A87]
Length = 281
Score = 63.3 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 47/246 (19%), Positives = 82/246 (33%), Gaps = 16/246 (6%)
Query: 33 CFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV 92
L ++ + +Y +A ++ + KA F Q +
Sbjct: 17 FVLQSCGDYQKVLKSDNAGDKYTFAENLYNEAKAEDSKRKYRKAIRLFEQILPQYRGKPQ 76
Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
K + A Y G Y ++ E ++ YP S V+ + SY + DQ
Sbjct: 77 GEKLSYLFADSYYQVGDYYLSSFEFERFVQSYPNSDKVEEASFKSAKSYYEESPRFDLDQ 136
Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
T ++ + + RY Y + A T R +L K EI + Y + G
Sbjct: 137 TDTNKAIEALQSYLNRYPEGEYAEEANLMATELRLKLEKKAFEIAKQYWRIGGNYREGNF 196
Query: 213 ------FQLVLANYSDAEHAEEAMARLVEAYVALALM----------DEAREVVSLIQER 256
F +A+Y + EEA +A + A+ A E ++
Sbjct: 197 TAAITSFNNFIADYPGTPYREEAFYLRFDAAYSYAINSYRNLMQERLQAALEYYQAYKKS 256
Query: 257 YPQGYW 262
YP+G +
Sbjct: 257 YPEGEY 262
>gi|320105768|ref|YP_004181358.1| outer membrane assembly lipoprotein YfiO [Terriglobus saanensis
SP1PR4]
gi|319924289|gb|ADV81364.1| outer membrane assembly lipoprotein YfiO [Terriglobus saanensis
SP1PR4]
Length = 596
Score = 63.3 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 47/251 (18%), Positives = 95/251 (37%), Gaps = 22/251 (8%)
Query: 43 SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102
S+D L + + +++Y+KA+ K + A +P + ++ L A
Sbjct: 109 SKDNPLAGLDSTQPDKQLYDKALASTKRGRYDVARLELQTLLATYPDSEYMMRAKLAFAD 168
Query: 103 VQYSAGKY---QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
Y G QA + +++IT +P + VG Y + + D
Sbjct: 169 SWYREGGTAALAQAETEYKDFITFFPNAPEAAEAQMRVGDIYFKQMDTPDRDYTKAVHAQ 228
Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219
+ +++++ +S + GA+ + + LA +E I +Y R + A+I R+Q V+
Sbjct: 229 EEYRTMLQQFPDSTLIPGAKQRLREVQEVLATRETNIAAFYAGRENWPASIARYQTVVDT 288
Query: 220 YSDAEHAEEAMARLVEAYVALA-------------------LMDEAREVVSLIQERYPQG 260
Y H++EA+ L +A+ A A D+A + +Y
Sbjct: 289 YPIFSHSDEALIGLGDAFAAEARMVRVMKLPEGAKARLVKIYEDQAAAAYGRVVTQYSAS 348
Query: 261 YWARYVETLVK 271
++
Sbjct: 349 AHVEDARDRLE 359
>gi|33519651|ref|NP_878483.1| putative lipoprotein [Candidatus Blochmannia floridanus]
gi|33517314|emb|CAD83699.1| DNA uptake lipoprotein [Candidatus Blochmannia floridanus]
Length = 246
Score = 63.3 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 44/251 (17%), Positives = 100/251 (39%), Gaps = 20/251 (7%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
+ I ++ + + S + +Y+ A L + N+++A +
Sbjct: 1 MRILFYIILALNMIMTISCTTISHHKIPDQDTNH------LYKIAYNKLLQNNYTEAIQD 54
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
+ F ++ L + Y + A + ++ YP KN+DYV Y+ G+
Sbjct: 55 LLYLKNLYLFEPCPQQIYLDLIYAYYKSNDLTSANNCINHFLNVYPNHKNLDYVLYIHGI 114
Query: 140 SYAQMIR--------------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
+ R ++ + S++++ Y NS Y + +
Sbjct: 115 INMHLDRNNPFPLLIKHLYTCWFNHNPIHANIAFHSFSKLIQNYPNSQYAPDSYKRLIFL 174
Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
+N++A ++ I ++Y K+ Y++ I R + +L + D + +A+ + AY + L+D+
Sbjct: 175 KNRIAYYKLAIIKFYDKKNAYISVITRSEEMLRYFPDTQATYQALHYMRRAYQNIHLIDQ 234
Query: 246 AREVVSLIQER 256
A + +I E
Sbjct: 235 ANIINQIITEN 245
>gi|224368344|ref|YP_002602507.1| putative DNA uptake lipoprotein [Desulfobacterium autotrophicum
HRM2]
gi|223691060|gb|ACN14343.1| putative DNA uptake lipoprotein [Desulfobacterium autotrophicum
HRM2]
Length = 201
Score = 62.9 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 44/189 (23%), Positives = 83/189 (43%)
Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
+ + + ++Q++ A + F +PF+ A + L A + +Y +A
Sbjct: 2 EKSAETLVREGSAQFRDQDYKYAIKSFTTLKDWYPFSKYAILAELKIADAHFQLEEYDEA 61
Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
+E+ +P+++ + YV Y G + I V DQR +R+V R+ ++P
Sbjct: 62 IFAYQEFENLHPKNEAIPYVIYQTGRCWFDRIDTVDRDQRCALKAQTEFNRLVHRFPDAP 121
Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
A ++ V LA E+ + +Y K Y AA+ RF+ + ANY D +EA+ R+
Sbjct: 122 ESAKAAQHIEVCIKSLAGHELYVAEFYFKAKHYKAAMKRFEHLFANYPDTREGKEALPRI 181
Query: 234 VEAYVALAL 242
+
Sbjct: 182 AVCREMIDQ 190
>gi|94265668|ref|ZP_01289408.1| putative lipoprotein [delta proteobacterium MLMS-1]
gi|93453795|gb|EAT04164.1| putative lipoprotein [delta proteobacterium MLMS-1]
Length = 272
Score = 62.9 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 40/172 (23%), Positives = 80/172 (46%)
Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
+ + + N+ KA + F++ +PF+ V + L +A + Y++A
Sbjct: 49 TPEHLALDGLEEMNRGNYRKALKLFDEIKERYPFSSVGPLAELKAADANFHLRNYREAHL 108
Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
L +E+ +P ++ + YV + +GMS+ + I + D + SR+ Y +SPY
Sbjct: 109 LYQEFENNHPTNEAMPYVLFQMGMSHYRRIDTIDRDPAHAINAVAAFSRLNRAYPDSPYR 168
Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
+ A + R+ LA E+ + +Y+K EY A R +L Y +++ +
Sbjct: 169 EEAEARLLAARDFLARHEMFVATFYVKTKEYQQAEGRLNHLLETYPESDISP 220
Score = 38.2 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 14/111 (12%), Positives = 30/111 (27%), Gaps = 8/111 (7%)
Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
Y + + + E++ Y A +Q N+ E
Sbjct: 65 NYRKALKLFDEIKERYPFSSVGPLAELKAADANFHLRNYREAHLLYQEFENNHPTNEAMP 124
Query: 228 EAMARLVEA-YVALALMD-------EAREVVSLIQERYPQGYWARYVETLV 270
+ ++ + Y + +D A S + YP + E +
Sbjct: 125 YVLFQMGMSHYRRIDTIDRDPAHAINAVAAFSRLNRAYPDSPYREEAEARL 175
>gi|298531012|ref|ZP_07018413.1| outer membrane assembly lipoprotein YfiO [Desulfonatronospira
thiodismutans ASO3-1]
gi|298509035|gb|EFI32940.1| outer membrane assembly lipoprotein YfiO [Desulfonatronospira
thiodismutans ASO3-1]
Length = 243
Score = 62.5 bits (149), Expect = 6e-08, Method: Composition-based stats.
Identities = 44/204 (21%), Positives = 89/204 (43%), Gaps = 6/204 (2%)
Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
G L+ +E+ + V ++++ ++KA EYF+ FPF+ +
Sbjct: 21 GCAWFQRGPEPLED-----TPQELAQAGVDAMEQERYNKAIEYFSDLRDRFPFSPHTPTA 75
Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
+ +G Y A ++ E+ P + + YV + G+++ + QR +
Sbjct: 76 EVALGDAYMKSGNYDAAITVFTEFAEMNPRHEYMPYVLFRTGLAHFNKFTSIDRPQRNMQ 135
Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
L+Y R+ + Y + Y + +R+Y R ++A E+ I +Y + Y +A R++ V
Sbjct: 136 EALEYFRRVAQVYPETEYAEYSRYYKVQCRKKIAEHELYIADFYWRTKRYGSAYERYRYV 195
Query: 217 LANYSDAE-HAEEAMARLVEAYVA 239
+ N+ D + E A R +Y
Sbjct: 196 MDNFEDLPEYVEYAGERAKRSYYK 219
>gi|254495492|ref|ZP_05108416.1| conserved hypothetical protein [Polaribacter sp. MED152]
gi|85819847|gb|EAQ41004.1| conserved hypothetical protein [Polaribacter sp. MED152]
Length = 289
Score = 62.5 bits (149), Expect = 7e-08, Method: Composition-based stats.
Identities = 48/239 (20%), Positives = 82/239 (34%), Gaps = 15/239 (6%)
Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106
V + E Y+ AV + + FSKA F + + + + M A ++
Sbjct: 22 EYQKVLNKGSVEEKYKMAVKMYETKKFSKALRLFEKVTPAYRGKPQMERIQFMVAQSNFN 81
Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
Y A + + YP S + +L SY D T+ L+ +
Sbjct: 82 VKNYTTAGYYFDRFTKNYPSSSKNEEAAFLSAYSYKLASPVSSKDPTDTRKALESFQMFI 141
Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEV-----EIGRYYLKRGEYVAAIPRFQLVLANYS 221
Y +S ++ A + R +L K Y AAI F +LA+Y
Sbjct: 142 NNYPDSDKIEEANQHYKELRYKLQKKYFDIAKVYYTTADYDMRNYKAAIQAFDNLLADYL 201
Query: 222 DAEHAEEAM-ARLVEAYV---------ALALMDEAREVVSLIQERYPQGYWARYVETLV 270
+E EEA+ RL A+ + +A E + YP+ + ++
Sbjct: 202 GSEFKEEALFYRLKAAHDFVLKSTERRKPERIKDAIEAYDKLVRNYPESQYLEEANEML 260
>gi|317485235|ref|ZP_07944116.1| outer membrane assembly lipoprotein YfiO [Bilophila wadsworthia
3_1_6]
gi|316923526|gb|EFV44731.1| outer membrane assembly lipoprotein YfiO [Bilophila wadsworthia
3_1_6]
Length = 240
Score = 62.5 bits (149), Expect = 7e-08, Method: Composition-based stats.
Identities = 49/203 (24%), Positives = 91/203 (44%), Gaps = 1/203 (0%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
+E+YE A ++E+N+S+A +Y+ + +FPF+ ++ L + GKY
Sbjct: 27 PPPEDTAQELYEGANDAMQEKNYSQAAQYYTKLKDNFPFSPYTVEAELSLGDAFFLDGKY 86
Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
+AA +E+ + +P + + YV Y VGMS + V +T+ L++ R+ E Y
Sbjct: 87 PEAAEAYKEFESLHPRHEAIPYVLYQVGMSNLKSFISVDRPTTSTQEALEFFGRLRETYP 146
Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA-EEA 229
NS Y + + + R LA E+ +G + Y A R+ ++ N+ D A
Sbjct: 147 NSEYAQKSVEEMKNCRRLLAEHELYLGDVFWNMNNYGPAWRRYTYIVDNFPDVPEVSAHA 206
Query: 230 MARLVEAYVALALMDEAREVVSL 252
+ + AY + +
Sbjct: 207 KEKALSAYYRYREQQSQKAREQI 229
>gi|95929334|ref|ZP_01312077.1| lipoprotein, putative [Desulfuromonas acetoxidans DSM 684]
gi|95134450|gb|EAT16106.1| lipoprotein, putative [Desulfuromonas acetoxidans DSM 684]
Length = 252
Score = 62.1 bits (148), Expect = 7e-08, Method: Composition-based stats.
Identities = 51/219 (23%), Positives = 94/219 (42%), Gaps = 2/219 (0%)
Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
S S RE+ +K + ++++++ A E++ + F + +
Sbjct: 17 CSSNKSA-TQTASPATSEAMREL-QKGEIAMEKEHYLAAIEHWQKVRDSFTSPELTALAE 74
Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
L Y+ Y A + E+++ ++P V Y +G S+ + DQ AT+
Sbjct: 75 LKIGDAYYAQEDYISAVASYEDFLKKHPGHTQTASVMYRLGKSHFAQLLSADRDQTATRN 134
Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
L ++++ Y +S + Y+ N+LAA E IGR+YLK Y AAI R + +
Sbjct: 135 ALATFEQLLKNYPDSIDPQELNSYIEQCHNRLAANEAYIGRFYLKTKRYTAAISRLENIT 194
Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
Y + + + L A D+A +SL+Q+R
Sbjct: 195 NTYPNYPNLTGVLFDLARAQKFDGKSDQALATLSLLQQR 233
>gi|242279291|ref|YP_002991420.1| outer membrane assembly lipoprotein YfiO [Desulfovibrio salexigens
DSM 2638]
gi|242122185|gb|ACS79881.1| outer membrane assembly lipoprotein YfiO [Desulfovibrio salexigens
DSM 2638]
Length = 243
Score = 62.1 bits (148), Expect = 8e-08, Method: Composition-based stats.
Identities = 50/234 (21%), Positives = 94/234 (40%), Gaps = 4/234 (1%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
KF S L G Y +E++E V +K++ + A EYF
Sbjct: 4 KFLSIFLASFLFISLSGCG----VIDYYFLPKPEDTAQELFEAGVQAMKDKEYFDATEYF 59
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
++ +PF+ K+ + + KY A+ +E+ +P + + YV Y +G+S
Sbjct: 60 SKLKDRYPFSPYTVKAEISLGDAYFLDKKYFDASEAYKEFAALHPGNDEIPYVLYQIGLS 119
Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
+ + Q L+Y R+ E Y + Y K A+ Y+ R LA E+ I ++
Sbjct: 120 NFNLFSSIDRPQSNITEALEYFYRVEEAYPETQYAKSAKEYIVKCRRALADHELYIADFF 179
Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
+ ++ +A R+ V+ N+ D + + E ++E +Q
Sbjct: 180 WRSSKFGSAWKRYAYVVRNFKDLPEVRKYAMKQAEMSYYEYQKTLSQEERERLQ 233
>gi|120602370|ref|YP_966770.1| lipoprotein [Desulfovibrio vulgaris DP4]
gi|120562599|gb|ABM28343.1| putative lipoprotein [Desulfovibrio vulgaris DP4]
gi|311233769|gb|ADP86623.1| outer membrane assembly lipoprotein YfiO [Desulfovibrio vulgaris
RCH1]
Length = 243
Score = 62.1 bits (148), Expect = 8e-08, Method: Composition-based stats.
Identities = 53/211 (25%), Positives = 90/211 (42%), Gaps = 5/211 (2%)
Query: 19 LYKFALTIFFSIAVCF-LVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
+ K L A+ F L G Y +E+YE ++E+++ A
Sbjct: 1 MRKTLLRAACMAALTFMLSGCGI----IDYFYLPPPEDTAQELYESGNDAMREKDYVAAA 56
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
+ + + ++PF+ ++ L A + +Y AA +E+ T +P + + YV Y V
Sbjct: 57 QAYTRLKDNYPFSPYTIEAELSLADAYFLDEEYPAAAEAYKEFETLHPRHQAIPYVLYQV 116
Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
GM+ + V + QY R+ E Y + Y A ++ R LA +E+ I
Sbjct: 117 GMARLKSFISVDRPVNNVQEAYQYFQRLRESYPGTEYAAKAEEHMKECRRLLAERELFIA 176
Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
Y + G+Y AA R+ V N+ D HA E
Sbjct: 177 DVYWRTGKYGAAWQRYSFVRDNFKDVPHAVE 207
>gi|116749145|ref|YP_845832.1| ComL family lipoprotein [Syntrophobacter fumaroxidans MPOB]
gi|116698209|gb|ABK17397.1| lipoprotein, ComL family [Syntrophobacter fumaroxidans MPOB]
Length = 258
Score = 62.1 bits (148), Expect = 9e-08, Method: Composition-based stats.
Identities = 44/212 (20%), Positives = 88/212 (41%), Gaps = 7/212 (3%)
Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDV-------YLDSVTDVRYQREVYEKAVLFLKE 70
++Y+FA + V G S T + ++ + + +++
Sbjct: 10 KVYRFAAFVPLLSLVLVTGGCGTFLGEFYFGDLLGGKKSSSTVDKTAEQLAVEGMQKMQK 69
Query: 71 QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
+++ A + F + +P++ A + L + KY +AA EE+ +P ++ V
Sbjct: 70 KDYDDALKAFRKLKEHYPYSKYAILAELKIGDALFHDKKYSEAAIAYEEFARLHPRNEVV 129
Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
YV Y +GMS+ D T+ ++ R+V+ + S Y + A+ + + + A
Sbjct: 130 PYVLYQIGMSHFLTFTTTDRDPEETQAAIEAFQRVVQMFPQSDYARRAQKQLFECQKRAA 189
Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
A E + Y + GEY A R + + YS
Sbjct: 190 AHEFNVASLYYRMGEYFATRARLRTINEKYST 221
>gi|225630083|ref|YP_002726874.1| competence lipoprotein ComL, putative [Wolbachia sp. wRi]
gi|225592064|gb|ACN95083.1| competence lipoprotein ComL, putative [Wolbachia sp. wRi]
Length = 217
Score = 61.7 bits (147), Expect = 9e-08, Method: Composition-based stats.
Identities = 67/229 (29%), Positives = 114/229 (49%), Gaps = 12/229 (5%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+YK +T F + F + + + E+YE+AV ++ + +A
Sbjct: 1 MYKTLITCFIFLICSFTQSYA-----------DDLEKTETELYEEAVELFDQKKYKQAIR 49
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
F++ +PF+ A K+ L+S Y+ G Y AAS ++YI Y +++ YVYYL
Sbjct: 50 AFHKIEDLYPFSYWAMKAKLLSGVSHYNMGNYSSAASDMDDYIYVYSNGEDLPYVYYLRV 109
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
+SY I V Q+ L+ + + + S YV + + ++ KE IG+
Sbjct: 110 LSYYMQINKVQLGQQTAYKTLELATEYINLFPGSEYVDEIKERAKLITEHISTKEYSIGK 169
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
+YL+RGEY+AAI RFQ + + Y D+++ +++ LV A+ AL L EA
Sbjct: 170 FYLRRGEYLAAIKRFQNMAS-YKDSKYFSKSINYLVAAHSALGLDLEAE 217
>gi|298208455|ref|YP_003716634.1| lipoprotein protein, putative [Croceibacter atlanticus HTCC2559]
gi|83848378|gb|EAP86247.1| lipoprotein protein, putative [Croceibacter atlanticus HTCC2559]
Length = 277
Score = 61.7 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 48/257 (18%), Positives = 79/257 (30%), Gaps = 12/257 (4%)
Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLK--EQNFSKAYEYFNQ 82
F + + D YE+A K + + KA + F Q
Sbjct: 9 LFFTLLTIILFSSCSEYQKALKNDDIAKKYELGISYYEQAQDGAKRPKAKYRKAIKLFEQ 68
Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
+ K + A Y Y + E + YP+S V+ + SY
Sbjct: 69 ILPQYRGKPQGEKLAFVYANSYYELEDYFLSGYQFERFTKAYPDSDRVEEAAFKSARSYY 128
Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
+ DQ T L + Y +++ A T +L K EI + Y
Sbjct: 129 EGSPRYSLDQADTDKALDKLQLYFVTYPEGQFIEEANVMATELGQKLEKKAYEIAKQYHH 188
Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE----------AREVVSL 252
Y AI F L +Y + + E+A+ E+ LA+ A+ +
Sbjct: 189 TENYKPAIEAFDNYLVDYPGSSYREKAIYYKFESAYLLAINSYDYLVEERLLVAKSYLDN 248
Query: 253 IQERYPQGYWARYVETL 269
+ Y G + L
Sbjct: 249 YFKYYQDGELSVKANEL 265
>gi|78188052|ref|YP_378390.1| putative lipoprotein [Chlorobium chlorochromatii CaD3]
gi|78170251|gb|ABB27347.1| putative lipoprotein [Chlorobium chlorochromatii CaD3]
Length = 311
Score = 61.7 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 36/269 (13%), Positives = 77/269 (28%), Gaps = 11/269 (4%)
Query: 1 MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV 60
+ + L + + I + I ++ L G + V+D
Sbjct: 3 LCSFLFKNLSILAMTFSRFIASVCLIALPVSALSLSGCSSSRQPTTASEQVSDG------ 56
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
Y +A +K+ ++ A + L Y +Y AA + +
Sbjct: 57 YARAEALIKKGDYRSAVLVLEPILFTSRATALEDDVLFRLGQAYYHTEQYLLAADMFTKV 116
Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM---SRIVERYTNSPYVKG 177
++V SY +M DQ T+ ++ + + +
Sbjct: 117 QQLPASPYA-ATAQFMVASSYEKMSPPFELDQAYTQKAIEEFALYRELYPLTDSVRSAEQ 175
Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
A F+ + + A + + G + R+ + A A + Y
Sbjct: 176 AAFWKEMLKVDAANETYKKNYAQAMVGMSRSDSVRYAGKAITTLREKLAHNA-YSVALHY 234
Query: 238 VALALMDEAREVVSLIQERYPQGYWARYV 266
L + A + + RYP + +
Sbjct: 235 QQLGKLKAATIFLDEVIARYPDTSYYKLA 263
>gi|299135640|ref|ZP_07028824.1| outer membrane assembly lipoprotein YfiO [Acidobacterium sp.
MP5ACTX8]
gi|298601764|gb|EFI57918.1| outer membrane assembly lipoprotein YfiO [Acidobacterium sp.
MP5ACTX8]
Length = 611
Score = 61.7 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 41/227 (18%), Positives = 88/227 (38%), Gaps = 9/227 (3%)
Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL-- 97
++ S+ S +++Y+KA+ K ++ A +P + ++
Sbjct: 98 KRDSKLQPQLSKDAQLPDKQLYDKALAQSKSGHYDVARLDLQTLLNTYPDSQYQMRAKLA 157
Query: 98 -LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
S + + + QA ++IT +P VG Y + + D
Sbjct: 158 VADSFYREGGSAALAQAEQEYTDFITFFPNVPEAAEAQMRVGDIYLKQMDVPDRDYTKAL 217
Query: 157 LMLQYMSRIVERYTNSPYV--KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
+ ++ +Y ++P + R + + +A +E E+G +Y + A I R+Q
Sbjct: 218 KAEEAYRTMLRQYRDAPPKLLEEVRQKLREVQEVMATREAELGAFYASHENWAATIARYQ 277
Query: 215 LVLANYSDAEHAEEAMARLVEAYVALA--LMDEA--REVVSLIQERY 257
V+ Y H ++A+ L +AY A A + +A + + + Y
Sbjct: 278 TVIDQYPQYSHMDDALIGLGDAYAAQAHIIRSQALPEAARAKLLQEY 324
>gi|149178098|ref|ZP_01856693.1| hypothetical protein PM8797T_14224 [Planctomyces maris DSM 8797]
gi|148843018|gb|EDL57386.1| hypothetical protein PM8797T_14224 [Planctomyces maris DSM 8797]
Length = 484
Score = 61.3 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/229 (14%), Positives = 76/229 (33%), Gaps = 10/229 (4%)
Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
+ +D + + Y+KA K Q++ KA + F + F + + M
Sbjct: 79 EKKKDANFIEPSIGAAE---YQKANATFKAQDYKKAEKEFKAIVKKFKNDPIKEDAQFMV 135
Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
A Q++ KY A ++ + +P S+++D + M +++ +
Sbjct: 136 AESQFAQKKYSWAQDSYDQLLVDFPSSRHLDQTTKRLFMIARYWLQEPSIVKGGD----- 190
Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220
+ V +++ A R A+ + + +
Sbjct: 191 --IQQVNLEDPGSETPEIPTDGKDRKSRWALVPNLFDRSRPVFDTENRALEALKSIWLHD 248
Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
A++A+ Y+ +A SL++E YP+ + L
Sbjct: 249 PTGPLADDALMLTASHYLKKGRYMDADRTFSLLREEYPKSPHLKDAFML 297
Score = 39.4 bits (89), Expect = 0.52, Method: Composition-based stats.
Identities = 12/104 (11%), Positives = 31/104 (29%)
Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
+ + + + A E + K +Y A F+ ++ + +
Sbjct: 69 MQRIMQTAMWEKKKDANFIEPSIGAAEYQKANATFKAQDYKKAEKEFKAIVKKFKNDPIK 128
Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
E+A + E+ A A++ + +P +
Sbjct: 129 EDAQFMVAESQFAQKKYSWAQDSYDQLLVDFPSSRHLDQTTKRL 172
Score = 36.7 bits (82), Expect = 3.1, Method: Composition-based stats.
Identities = 29/161 (18%), Positives = 60/161 (37%), Gaps = 1/161 (0%)
Query: 75 KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
+A E P +A +L+++A G+Y A +YP+S ++ +
Sbjct: 236 RALEALKSIWLHDPTGPLADDALMLTASHYLKKGRYMDADRTFSLLREEYPKSPHLKDAF 295
Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
L + YD K + + + + + + A +E
Sbjct: 296 MLGTHVKLMSYQGPAYDATVLKDAGELKETTLRLFPEAQ-QARLKEELKKIEQAKAKREW 354
Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
E +Y+++RG+ +A L++ +Y + A +A L E
Sbjct: 355 ETVQYWMRRGKPKSAAIYCNLLIEHYPTSPFANQARELLAE 395
>gi|40062541|gb|AAR37486.1| hypothetical protein MBMO_EBAC750-01B07.28 [uncultured marine
bacterium 106]
Length = 235
Score = 61.3 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/248 (12%), Positives = 75/248 (30%), Gaps = 19/248 (7%)
Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQ-REVYEKAVLFLKEQNFSKAYEYF--NQCSR 85
I + F+ G + + T+ ++ + L A + N+ +
Sbjct: 2 IILIFFIGGCSSSGANKTTPLNNTEEMAALKKTLAQQEELLDRLQALTADQLLRSNEIEQ 61
Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
P + +Q K ++ S ++ + + I
Sbjct: 62 SMPPRDLLESLQKGFIELQKKTLKLEKQLSELKKGLETSRSKGKTPKSSANNFSINQEKI 121
Query: 146 RD--VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
V ++++ I++ + + IG +L +
Sbjct: 122 ILGLVSLQSGNPDQAVEHLQDILKAKKATKLKGDI--------------LMAIGNGFLAQ 167
Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
G A + L L Y + H +A+ L +A L +++ + + + YPQ A
Sbjct: 168 GHSKQAASHYGLFLREYPKSRHTPQALYYLGQAMKDLGEIEKQKILWKELIINYPQSSLA 227
Query: 264 RYVETLVK 271
+ + ++
Sbjct: 228 KRAKKRLR 235
>gi|190571590|ref|YP_001975948.1| competence lipoprotein ComL, putative [Wolbachia endosymbiont of
Culex quinquefasciatus Pel]
gi|213018995|ref|ZP_03334802.1| competence lipoprotein ComL, putative [Wolbachia endosymbiont of
Culex quinquefasciatus JHB]
gi|190357862|emb|CAQ55321.1| competence lipoprotein ComL, putative [Wolbachia endosymbiont of
Culex quinquefasciatus Pel]
gi|212995104|gb|EEB55745.1| competence lipoprotein ComL, putative [Wolbachia endosymbiont of
Culex quinquefasciatus JHB]
Length = 228
Score = 61.3 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 69/237 (29%), Positives = 121/237 (51%), Gaps = 12/237 (5%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+YK + FF + F L + + E+YE+AV ++ + +A
Sbjct: 1 MYKTLIICFFLLTCPF-----------TQLYANDLEHTETELYEEAVKLYDQKKYKQAIR 49
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
F + +P + A K+ L+S Y+ G Y AAS ++YI YP +++ YVYYL
Sbjct: 50 AFQKIEDLYPLSYWAMKAKLLSGVSYYNMGNYSSAASDMDDYIYVYPNGEDLPYVYYLRV 109
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
+SY I V Q+ L+ + + + NS Y++ + + ++ KE IG
Sbjct: 110 LSYYMQINKVQLGQQIAYKTLELATEYINLFPNSEYIEEIKEKEKLITEHISKKEYSIGE 169
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
+YLKRGEY+AAI RFQ +++N D++++ ++ L+ A++AL L EA + +++ E
Sbjct: 170 FYLKRGEYLAAIKRFQDMISN-KDSKYSSRVISYLITAHLALGLDLEAEQYENMLVE 225
>gi|78357108|ref|YP_388557.1| putative lipoprotein [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78219513|gb|ABB38862.1| putative lipoprotein [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 243
Score = 61.0 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 46/231 (19%), Positives = 98/231 (42%), Gaps = 5/231 (2%)
Query: 19 LYKFALTIFFSIAVCF-LVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
+ + + +++ L G Y +E++E ++E++++ A
Sbjct: 1 MRRTIVRFMVMLSLLATLSGCGI----IDYFFLPPPEDTAQELFESGNDAMREKDYASAT 56
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
+YF++ +FPF+ A ++ L + +Y AA +E+ T +P K + YV + +
Sbjct: 57 DYFSKLKDNFPFSPYAIEAELSLGDAYFLDEEYAMAAEAYKEFETLHPRHKAIPYVLFQI 116
Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
G + + + Q +Y SR+ E Y S Y + A + R +A E+ +
Sbjct: 117 GNANLKSFVSIDRPQTNVAEAYEYFSRVRESYPGSEYAQKAGELLGECRRLMAEHELFVA 176
Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
+Y + G++ +A R+Q V + D E + A ++A++
Sbjct: 177 DFYWRTGKFRSAASRYQHVAQEFPDVEDLRAYAEEKGKIAYLRATEEKAQQ 227
>gi|256257867|ref|ZP_05463403.1| COML, competence lipoprotein [Brucella abortus bv. 9 str. C68]
gi|260884157|ref|ZP_05895771.1| competence protein ComL [Brucella abortus bv. 9 str. C68]
gi|260873685|gb|EEX80754.1| competence protein ComL [Brucella abortus bv. 9 str. C68]
Length = 162
Score = 61.0 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 44/151 (29%), Positives = 73/151 (48%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
K AL + L G ++ V + ++Y + + L +A + F
Sbjct: 11 KTALLSGTIAVLIPLAGCASKNDDIDLTKYVETIDPADKLYNEGLANLDAGRLDEAAKKF 70
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
R P+ ARK+L+M+AF Y G Y++A S+ + Y T YP S Y YY++G+S
Sbjct: 71 AAIDRQHPYTEWARKALVMAAFTNYRKGNYEEAISMAKRYNTLYPTSPESAYAYYIIGLS 130
Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
Y + I DV DQ A++ + M +++R+ N
Sbjct: 131 YFRQIPDVTRDQAASRRAIAAMQEVIDRFPN 161
Score = 40.2 bits (91), Expect = 0.35, Method: Composition-based stats.
Identities = 16/106 (15%), Positives = 29/106 (27%)
Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
++ + V A K G L G A +F + + E
Sbjct: 22 LIPLAGCASKNDDIDLTKYVETIDPADKLYNEGLANLDAGRLDEAAKKFAAIDRQHPYTE 81
Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
A +A+ +EA + YP + Y ++
Sbjct: 82 WARKALVMAAFTNYRKGNYEEAISMAKRYNTLYPTSPESAYAYYII 127
>gi|313203409|ref|YP_004042066.1| outer membrane assembly lipoprotein yfio [Paludibacter
propionicigenes WB4]
gi|312442725|gb|ADQ79081.1| outer membrane assembly lipoprotein YfiO [Paludibacter
propionicigenes WB4]
Length = 267
Score = 61.0 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 51/265 (19%), Positives = 86/265 (32%), Gaps = 22/265 (8%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
+ F I V L D Y KAV + + +F +A F
Sbjct: 1 MKKTSFFLLIVVLTLASCSDYQKLLKSDD-------AELKYNKAVEYFGKGDFMRATTLF 53
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
+ + + + L A Y A+ Y+ +P K V Y++G
Sbjct: 54 DAVATYYKGTERSEIVLNYLAKSYMGQKDYFSASEYYRTYVKTFPRGKFVIESKYMIGYC 113
Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV-----E 195
Y D DQ T + ++ Y S VK A + ++LA K
Sbjct: 114 YYLDSPDTRLDQADTYKAIAAFQEFIDIYPESELVKDATKLLDELNDKLAYKAYLSAKLY 173
Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA----LMDEAREVVS 251
Y + + Q L NY ++ E+ M ++ + LA +A +
Sbjct: 174 YNLGNYMGNNYESCVIAAQNGLKNYPATKYREDFMLLILNSKYELAVQSFETRKADRYRN 233
Query: 252 LIQE------RYPQGYWARYVETLV 270
I E YP G + + V+ ++
Sbjct: 234 TIDECYNYINEYPAGKYRKQVDKIL 258
>gi|312891339|ref|ZP_07750857.1| outer membrane assembly lipoprotein YfiO [Mucilaginibacter paludis
DSM 18603]
gi|311296200|gb|EFQ73351.1| outer membrane assembly lipoprotein YfiO [Mucilaginibacter paludis
DSM 18603]
Length = 306
Score = 60.6 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 42/237 (17%), Positives = 83/237 (35%), Gaps = 10/237 (4%)
Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
+ + + Y + + + ++++++A + F + + A A+
Sbjct: 24 KSKFERLKASNDNAKKYHEGIKYYNKKDYTRALDLFEDLVQRYRGTTEAEDLYYYYAYTN 83
Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
Y Y A + + YP S + ++ Y + DQ T+ + M
Sbjct: 84 YKLKDYTSARYHFKTFADSYPNSSRTEECRFMSAYCYYLDSPNFSLDQENTQKAIDAMQL 143
Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
+ Y S A + R++L K + YL G+Y +A+ F L +Y D +
Sbjct: 144 FINLYPKSDRAPEAGKLIQNLRDKLEEKSYANAKLYLTIGDYQSAVIAFGNSLRDYPDIK 203
Query: 225 HAEEAMARLVEAYV----------ALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+AEE ++A + A E+YP + + E L K
Sbjct: 204 YAEEMEFLTIKAQYLYAKNSYEIKQQERYESAIAFHDQFVEKYPNSKYLKDAELLKK 260
>gi|218960399|ref|YP_001740174.1| hypothetical protein; putative signal peptide [Candidatus
Cloacamonas acidaminovorans]
gi|167729056|emb|CAO79967.1| hypothetical protein; putative signal peptide [Candidatus
Cloacamonas acidaminovorans]
Length = 244
Score = 60.6 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 41/244 (16%), Positives = 93/244 (38%), Gaps = 11/244 (4%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
I V LV + + A ++ +S+A +
Sbjct: 1 MRKYIFLLLITVFCLVSCSSNKT----------QLSTEAKLKNADELFAKKKYSRAAVIY 50
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
+ + + + A ++ K+ A + +++I +P+ +NV Y+ +G+
Sbjct: 51 EEI-SFERKSAATAYATMKVADCYFNMNKFSDARAKYQQFINSFPDHENVADAYFRIGVC 109
Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
+ YDQ T ++ ++RY N P A Y+ + +L K+ G Y
Sbjct: 110 LFEESLPPQYDQTETIKCIEAFQTFIDRYPNDPRYVQAVDYIHKCQYKLLEKQYLTGYIY 169
Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
K +Y +A+ F +++ ++ E +++ + ++ D+A+ ++ RYP
Sbjct: 170 YKMKDYSSALMYFDEIVSLGNNDELDRQSLYYSAKLHLHQKNYDKAKASYERLKNRYPDS 229
Query: 261 YWAR 264
A+
Sbjct: 230 KEAK 233
>gi|149278759|ref|ZP_01884894.1| conserved hypothetical lipoprotein [Pedobacter sp. BAL39]
gi|149230378|gb|EDM35762.1| conserved hypothetical lipoprotein [Pedobacter sp. BAL39]
Length = 309
Score = 60.6 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 53/267 (19%), Positives = 89/267 (33%), Gaps = 21/267 (7%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
K L + F+I + G + Q + + V Y++A+ ++N+SKA
Sbjct: 4 IKHLLILSFTIIALTIAGCKSQFEKIRLSNDVAKK------YQEAMRLYNKKNYSKAIIL 57
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
F S+ + A + Y Y A + + YP SK + YL
Sbjct: 58 FEDLSQKYRGRAEAEDLNYYYSLTLYKLKDYTTARYQFKSFADTYPTSKYAEECRYLGAY 117
Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
Y DQ T + + + Y S A Y+ RN+L K +
Sbjct: 118 CYYLESPIWSLDQENTYKAIDALQLFINFYPKSERAADASKYIADLRNKLETKAFNNAKL 177
Query: 200 Y-----LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM----------D 244
Y Y +A+ + ++ D + AEE +V++ A A
Sbjct: 178 YYTLGGYDINNYKSAVIALKNAQIDFPDIKFAEEMDLLIVKSQFAYAKNSYETRQEDRYS 237
Query: 245 EAREVVSLIQERYPQGYWARYVETLVK 271
EA E +P+ + L K
Sbjct: 238 EAITYADEFIESHPESKLLPEAQELKK 264
>gi|297180550|gb|ADI16762.1| DNA uptake lipoprotein [uncultured gamma proteobacterium
HF0010_11B23]
Length = 224
Score = 60.6 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 56/230 (24%), Positives = 102/230 (44%), Gaps = 17/230 (7%)
Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
G D V ++Y A + QN+ A + + R +PF A ++
Sbjct: 2 GCASNEKEDAEPPEV-------QLYRLAQDRISAQNYLGAVDSLVRIERFYPFGVYAEQA 54
Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
+ Y +G Y QA + E++I YP + NVDY Y++ GM+ + + +
Sbjct: 55 RADLIYAHYMSGDYDQAYAASEKFIRLYPRNTNVDYAYFMKGMTGYYADEGLLGNLFSLS 114
Query: 157 LMLQY----------MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
L + ++ + RY S Y+ AR + RN +A+ E++ YY+KRG Y
Sbjct: 115 LAKRDIGGAMQSYADLTEFLIRYPESEYIDAARERLIFLRNLIASSELDGAEYYMKRGAY 174
Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
+AA+ R VL N ++ + A+ + ++++ L + A +V S+
Sbjct: 175 LAALNRANYVLKNIPNSTETQRALDIMKKSFIELGYEEYAEKVSSVEALN 224
>gi|308272037|emb|CBX28645.1| hypothetical protein N47_G39690 [uncultured Desulfobacterium sp.]
Length = 218
Score = 60.6 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 42/213 (19%), Positives = 89/213 (41%), Gaps = 8/213 (3%)
Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
+ + F I G ++ + +E ++ ++ +++ + +A E F +
Sbjct: 8 VILLFCIMAFACYGCATLDTKK--------EKSAKEYADEGMVSFQDKEYKRAIESFQKI 59
Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
+PF+ + L A Y +Y +A + E+ +P ++ V YV + G+ Y +
Sbjct: 60 KDWYPFSNYLVLADLKIADSHYMLKQYNEAVAAYNEFEKLHPANEAVPYVIFQTGLCYFE 119
Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
+ Q + ++ R+ +++ + Y R + + LA E+ IG +Y K
Sbjct: 120 QVDTFDRQQATARKAIEIFMRLNKQFPKNIYETKTRECINICYKTLAESELGIGLFYYKS 179
Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
Y AA+ RF+ VL Y D +A+ +
Sbjct: 180 KYYKAALYRFRNVLTKYPDTGVHHQAIIYIARC 212
>gi|67809654|gb|AAY81973.1| putative competence lipoprotein [Wolbachia pipientis]
Length = 209
Score = 60.2 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 64/206 (31%), Positives = 111/206 (53%), Gaps = 1/206 (0%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
+ + E+YE+AV ++ ++KA F++ +PF+ A K+ L+S Y+ G Y
Sbjct: 3 DDLEKTETELYEEAVELFDQKKYNKAIRAFHKIEDLYPFSYWAMKAKLLSGVSHYNMGNY 62
Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
AAS ++YI Y +++ YVYYL +SY I V Q+ L+ + + +
Sbjct: 63 SSAASDMDDYIYVYSNGEDLPYVYYLRVLSYYMQINKVQLGQQTAYKTLELATEYINLFP 122
Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
S YV + + ++ KE IG++YL+RGEY+AAI RFQ + A+Y D+++ +++
Sbjct: 123 GSEYVDEIKERAKLITEHISTKEYSIGKFYLRRGEYLAAIKRFQNM-ASYKDSKYFSKSI 181
Query: 231 ARLVEAYVALALMDEAREVVSLIQER 256
L+ A+ AL L EA + S++
Sbjct: 182 NYLIAAHSALGLDLEAEQYESMLLAE 207
>gi|78485715|ref|YP_391640.1| competence lipoprotein ComL [Thiomicrospira crunogena XCL-2]
gi|78364001|gb|ABB41966.1| conserved hypothetical protein [Thiomicrospira crunogena XCL-2]
Length = 256
Score = 60.2 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 51/220 (23%), Positives = 91/220 (41%), Gaps = 9/220 (4%)
Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
++ ++ Y A + + + A Y+ + +P+ A +S L A+ Y
Sbjct: 20 SLVEKDESEWTVKDFYSHAKDAFESEQWESAIGYYEKLKAYYPYGKYAEQSYLELAYAYY 79
Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYY---------LVGMSYAQMIRDVPYDQRATK 156
+ + A EE+I YP+ + Y YY + + D +T
Sbjct: 80 RYDEPESAQRELEEFIRLYPKHAELAYAYYLRALAADSINKSWLDSWLTDPAMRDMASTT 139
Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
Q ++ R+ NS Y +R + V RN+LA E ++ YY KR Y+AA R + +
Sbjct: 140 KAYQAYIDLLNRFPNSKYAAKSRERLIVLRNRLARHEYQVAEYYFKRQAYLAAANRAKQI 199
Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
+ +Y + +A+ + EAY L + A V S+I
Sbjct: 200 IESYPRSMVNMKALGLMKEAYAKLGMTQNADNVQSVIDLN 239
>gi|88803410|ref|ZP_01118936.1| hypothetical protein PI23P_12497 [Polaribacter irgensii 23-P]
gi|88780976|gb|EAR12155.1| hypothetical protein PI23P_12497 [Polaribacter irgensii 23-P]
Length = 270
Score = 60.2 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 47/228 (20%), Positives = 83/228 (36%), Gaps = 15/228 (6%)
Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
E Y+ AV + QN+ KA F + + + + M A ++ Y A
Sbjct: 17 EEQYKMAVKMYETQNYDKAIRLFEKVTPSYRGKPQMERIEFMVAQSNFNEKNYSIAGFYF 76
Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
+ + +S + +L SY D T L + Y NS +
Sbjct: 77 NRFTNNFTKSSKKEEAAFLAAYSYKLASPRFSIDPTETNKALDAFQSFINTYPNSDKIIE 136
Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKR-----GEYVAAIPRFQLVLANYSDAEHAEEAMAR 232
A Y R++L K EI + Y K Y AAI F +L ++ ++ EEA+
Sbjct: 137 ANKYYAEIRSKLEKKYFEIAKTYYKTADYDLRNYKAAIQAFDNLLEDFLGTKYKEEALYF 196
Query: 233 LVEAY----------VALALMDEAREVVSLIQERYPQGYWARYVETLV 270
++A L ++ A E +Q+ +P+ + ++
Sbjct: 197 QLKAAHDFVLKSTDRRKLERIESAVEAHERLQKSFPESIYTEDANAML 244
>gi|255531053|ref|YP_003091425.1| outer membrane assembly lipoprotein YfiO [Pedobacter heparinus DSM
2366]
gi|255344037|gb|ACU03363.1| outer membrane assembly lipoprotein YfiO [Pedobacter heparinus DSM
2366]
Length = 309
Score = 59.8 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 52/266 (19%), Positives = 92/266 (34%), Gaps = 21/266 (7%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
K L + F+I + G + Q + + V Y++A+ ++N++KA F
Sbjct: 5 KHVLLLSFTIIALTIAGCKSQFEKIRLSNDVAKK------YQEAMRLYNKKNYAKALILF 58
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
S+ + A + A Y Y A + + YP SK + Y+
Sbjct: 59 EDLSQKYRGRAEAEELNYHYALTLYKLKDYTTARYQFKSFADTYPTSKYAEECRYMGAYC 118
Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
Y DQ T + + + Y S A Y+ + R +L K R Y
Sbjct: 119 YYLDSPAPSLDQENTYKAIDALQLFINFYPKSERAADAAKYIGLLRAKLEDKAYNNARLY 178
Query: 201 LKRGEYVAAIPR-----FQLVLANYSDAEHAEEAMARLVEAYVALALM----------DE 245
G Y + + + ++ D ++AEE ++++ A A +E
Sbjct: 179 YDLGGYDVSNYKAAVIALKNAQIDFPDIKYAEEMDFLIIKSQFAYAKNSLETRQEDRYNE 238
Query: 246 AREVVSLIQERYPQGYWARYVETLVK 271
A E +PQ + L K
Sbjct: 239 AITYADEFVEAHPQSKLLEDAKALKK 264
>gi|213961696|ref|ZP_03389962.1| outer membrane assembly lipoprotein YfiO [Capnocytophaga sputigena
Capno]
gi|213955485|gb|EEB66801.1| outer membrane assembly lipoprotein YfiO [Capnocytophaga sputigena
Capno]
Length = 268
Score = 59.8 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 54/262 (20%), Positives = 88/262 (33%), Gaps = 20/262 (7%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K+ I + D Y +A K + + KA
Sbjct: 3 MKKY---IIIGLLGVLFASCGEYQKALKSTDGSVK-------YIEAEKLYKAKKYKKANR 52
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
F Q + ++ + M Y +Y A+ E YP S+ +L
Sbjct: 53 LFEQIASEYAGKPQGERIYYMYGDACYQLKQYSLASYQFERLQKLYPRSEKATEASFLEA 112
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
S DQ T L+ + ++RY NS Y K A +L K+ EI +
Sbjct: 113 KSLYLETPKYSVDQTYTYQALEKLQYFLDRYPNSEYTKEANELTLDLVTRLEKKDFEIAK 172
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA-RLVEAYV---------ALALMDEARE 248
Y K +Y AA+ L N + EEA+ RL AY ++ A+E
Sbjct: 173 QYDKIRDYQAAMKSLDNFLTNNPGSPFREEALYTRLHSAYEWAINSVESKKEERLNTAKE 232
Query: 249 VVSLIQERYPQGYWARYVETLV 270
+ YP+ + + E ++
Sbjct: 233 AYDNLLRAYPESKFKKEAENML 254
>gi|149917378|ref|ZP_01905876.1| putative competence lipoprotein ComL [Plesiocystis pacifica SIR-1]
gi|149821715|gb|EDM81111.1| putative competence lipoprotein ComL [Plesiocystis pacifica SIR-1]
Length = 394
Score = 59.8 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 43/227 (18%), Positives = 87/227 (38%), Gaps = 10/227 (4%)
Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
+ RE YE A Q++ A Y FP++ R++ L+ A V Y +Y A
Sbjct: 26 QTARENYELAQASFDNQDWEDAAAYARFVRERFPYSRYVREAKLLEARVLYELKEYPSAQ 85
Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYA----------QMIRDVPYDQRATKLMLQYMSR 164
++ ++P ++V + ++ + + DQ + L +
Sbjct: 86 DAFRMFMAEHPTHEHVVNGWVPYMVAVSAYMASPSSVPFLPPHFQRDQELLRQTLMELEV 145
Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
+RY+ + AR +L E+ + R++L R AAI R Y+
Sbjct: 146 FFDRYSGTRMEPLARKLEAEVNRRLLEHELYVARFHLDRDRPEAAIMRLSSAHDRYAGIG 205
Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
E + L Y+ + ++ R+ + +Q ++P + + +K
Sbjct: 206 LDAEVLFLLGITYLRVGEVELGRQTFTELQMQHPAHHHGEQAKLYLK 252
>gi|332882672|ref|ZP_08450284.1| outer membrane assembly lipoprotein YfiO [Capnocytophaga sp. oral
taxon 329 str. F0087]
gi|332679472|gb|EGJ52457.1| outer membrane assembly lipoprotein YfiO [Capnocytophaga sp. oral
taxon 329 str. F0087]
Length = 287
Score = 59.8 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 50/221 (22%), Positives = 85/221 (38%), Gaps = 10/221 (4%)
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
Y +A K + + KA + F Q + ++ + + Y +Y A E
Sbjct: 54 YAEAEKQYKAKKYRKAVKLFEQIASEYSGKPQGERLYFLQGDAYYQMKQYSLATYPFERL 113
Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
YP S +L S + DQ T L+ + ++RY++S Y K A
Sbjct: 114 QKIYPRSAKAVEAAFLEAKSLYMQVPTYSVDQTYTYQALEKLQYFMDRYSDSDYAKEANE 173
Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA-RLVEAYV- 238
+ QL KE EI + Y +Y AA+ LAN + E+A+ RL AY
Sbjct: 174 LILNLLTQLQKKEFEIAKQYDLIRDYQAAMKSLDNFLANNPGSVFREDALYTRLHSAYEW 233
Query: 239 --------ALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+D A+E + +P+ + + + ++K
Sbjct: 234 AINSVESKQKERLDTAKEAYDTLLRAFPETKYKKEADNMLK 274
>gi|317153532|ref|YP_004121580.1| outer membrane assembly lipoprotein YfiO [Desulfovibrio aespoeensis
Aspo-2]
gi|316943783|gb|ADU62834.1| outer membrane assembly lipoprotein YfiO [Desulfovibrio aespoeensis
Aspo-2]
Length = 242
Score = 59.8 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 47/221 (21%), Positives = 91/221 (41%), Gaps = 5/221 (2%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
+ + + + + G +E+YE + + + + A +Y
Sbjct: 1 MRSSRLVASFLFLWLASGCAL----IDSYFLPPPEDTAQELYEAGMDAMGNKEYGDAQQY 56
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
F++ FPF+ A ++ L + Y A +E+ +P +++ YV Y +G
Sbjct: 57 FSKLKDRFPFSPFALRAELALGDAYFLDADYLMALDSYKEFEALHPSHESIPYVLYQIGS 116
Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
+ + R + Q + L+Y R+ E Y +S Y + +T GR LA EV + +
Sbjct: 117 ADFNLFRSIDRRQENIQEGLEYFYRLRETYPDSEYATASEDMITKGRRILAEHEVYVADF 176
Query: 200 YLKRGEYVAAIPRFQLVLANYSDAE-HAEEAMARLVEAYVA 239
+ + +Y A R+Q V+ N+SD + A R +Y
Sbjct: 177 FWRTEQYGPAWNRYQYVVENFSDVPDLRDYARKRAEYSYFE 217
>gi|325294284|ref|YP_004280798.1| outer membrane assembly lipoprotein YfiO [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325064732|gb|ADY72739.1| outer membrane assembly lipoprotein YfiO [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 316
Score = 59.8 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 48/213 (22%), Positives = 89/213 (41%), Gaps = 12/213 (5%)
Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85
I F + + FL R +Y++ + KE ++ K+ E +
Sbjct: 5 IIFFVCLLFLFSC------------EKIPRTAEGLYQEGMKAAKEGDWGKSTEMLEKALE 52
Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
+ + A ++ ++ AA EE++ YP S + +G+SY ++
Sbjct: 53 GELPPSKQELAKITLANSYFNDQDFENAALNYEEFLDLYPASPRAKDALFRLGISYLNLV 112
Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
+ +DQ TK ++ + V+ + N P V+ A+ Y + R LA EV IG Y +
Sbjct: 113 KGPQWDQTFTKKAIRAFEKFVKEFPNDPRVEKAKIYKNIARKILAENEVYIGGTYDMLHK 172
Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
+ A+I R+++V Y D E + + AY
Sbjct: 173 FTASINRYKIVKEKYRDVESLDRIDYLIGRAYF 205
>gi|239906803|ref|YP_002953544.1| hypothetical protein DMR_21670 [Desulfovibrio magneticus RS-1]
gi|239796669|dbj|BAH75658.1| hypothetical protein [Desulfovibrio magneticus RS-1]
Length = 245
Score = 59.8 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 42/190 (22%), Positives = 83/190 (43%), Gaps = 1/190 (0%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
+E+YE + ++++ A YF + +PF+ + + Y
Sbjct: 31 PPPEDTAQELYEAGRQSMADKDYYGAINYFMKLKDRYPFSPYTPMGTVALGDAYFLTEDY 90
Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
AA +E+ + +P S+ + YV Y VG+S + + Q + +QY + + +
Sbjct: 91 GMAAETYKEFESVHPRSEEIPYVLYQVGVSNFKRSESIDMPQSNLQEAIQYFYLLEQTFP 150
Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE-A 229
++ Y K A Y+ + ++A E+ + +Y + +Y AA R+ + NY D E E A
Sbjct: 151 DTEYGKEAADYIRRCKKRMAEHELFVADFYWRTSQYGAAWKRYMYTVENYKDLEEVLEYA 210
Query: 230 MARLVEAYVA 239
R +Y+
Sbjct: 211 KLRAELSYLE 220
>gi|220933427|ref|YP_002512326.1| outer membrane assembly lipoprotein YfiO [Thioalkalivibrio sp.
HL-EbGR7]
gi|219994737|gb|ACL71339.1| outer membrane assembly lipoprotein YfiO [Thioalkalivibrio sp.
HL-EbGR7]
Length = 239
Score = 59.4 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 50/237 (21%), Positives = 92/237 (38%), Gaps = 14/237 (5%)
Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
+A L G Q R D+ Y V + + + A + P
Sbjct: 3 LLASVLLAGCATQGVRPADDDT--------AAYRAVVEAVSASDCAAARQALQVMQAQHP 54
Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
+ + + +A+ S G+ +A L ++ Q+P + +Y YL + +++
Sbjct: 55 NSPRLPDARIETAYACLSGGELAEAEELVITFLEQHPGHPSEEYGRYLHALVAYARWKEL 114
Query: 149 PYDQRATKLM------LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
P D + ++ + +V +Y + Y R +T R LA E+E L+
Sbjct: 115 PPDTPSVRVAAQARQTFGRIRVLVSQYPETAYASDLRMMLTDLREGLARVELETIATDLQ 174
Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
G + A I R VL +Y+ E A A+A L+ A+ A AR + ++ +P
Sbjct: 175 AGRHQAVISRANYVLNHYAATESAPFALAALINAHRARGEEAAARTHLYRLESDWPD 231
>gi|255610036|ref|XP_002539124.1| Competence lipoprotein comL precursor, putative [Ricinus communis]
gi|223508511|gb|EEF23259.1| Competence lipoprotein comL precursor, putative [Ricinus communis]
Length = 169
Score = 59.4 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 32/132 (24%), Positives = 59/132 (44%)
Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
M D + ++ +VER+ S Y K + + N LA
Sbjct: 18 ATFNERGIMEKYTKQEINDRDPKTLRVSFNAFKELVERFPTSRYAKDSTQRMVYLVNTLA 77
Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
E+ + RYY++R YVAA+ R + VL Y ++ E+A+ ++ AY A+ + D + +
Sbjct: 78 MHEMHVARYYMQRKAYVAALNRTRYVLETYPNSSSVEDALVTMISAYDAMDMADLKADTL 137
Query: 251 SLIQERYPQGYW 262
+++ YP+
Sbjct: 138 RILKTNYPENPM 149
>gi|146301211|ref|YP_001195802.1| DNA uptake lipoprotein-like protein [Flavobacterium johnsoniae
UW101]
gi|146155629|gb|ABQ06483.1| DNA uptake lipoprotein-like protein [Flavobacterium johnsoniae
UW101]
Length = 264
Score = 59.4 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 43/221 (19%), Positives = 77/221 (34%), Gaps = 7/221 (3%)
Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
+ I +E A ++KA F Q
Sbjct: 2 KKIVSLLIVAALFCSCS-------EYQKALKNEDVAAKFEVATKMYDAGKYNKAIRLFEQ 54
Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
+ + A K M + Y +Y A E +++ YP S+ V +L SY+
Sbjct: 55 LAPTYRGKPQAEKLFYMFSQSYYKTKQYYLAGYQFESFVSGYPRSEKVQEAAFLGAYSYS 114
Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
++ DQ T L + ++ Y NS Y+ A V + +L K E + Y
Sbjct: 115 KLAPVYSLDQADTVKALDKLQAFIDNYPNSEYLAQANESVKILNGKLEKKAYENAKGYNT 174
Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243
+Y +A+ F +A++ E+A+ ++ LA+
Sbjct: 175 ISDYKSALVAFDNFIADFPGTPLKEDALFYKYDSAYQLAIN 215
>gi|126661830|ref|ZP_01732829.1| TPR repeat protein [Flavobacteria bacterium BAL38]
gi|126625209|gb|EAZ95898.1| TPR repeat protein [Flavobacteria bacterium BAL38]
Length = 264
Score = 59.0 bits (140), Expect = 6e-07, Method: Composition-based stats.
Identities = 42/231 (18%), Positives = 82/231 (35%), Gaps = 7/231 (3%)
Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
I F FL+ D ++Y + + KA + Q +
Sbjct: 4 VISFLFIAFFLISCSEYQKALKSDDVAVKNEAANKMY-------ESGKYLKAIRLYEQIA 56
Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
+ A + + Y + +Y A E ++ YP+S+ + + + ++
Sbjct: 57 PAYKGKPSAERMFYFYSMALYKSNQYYLAGYQLENFVATYPKSEKREESAFYAAECFYKL 116
Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204
DQ T L M ++ Y +S ++ A YV R +L K EI + Y
Sbjct: 117 SPKYSLDQTDTSKALDKMQHFIDVYPDSQFLTQANVYVKELREKLEKKAFEIAKQYNTIS 176
Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
+Y A+ + LA+Y E+A+ +++ LA+ + +
Sbjct: 177 DYKGALKALENFLADYPGTPFKEQALYYRLDSAYNLAINSIELKKQERLSY 227
>gi|163788588|ref|ZP_02183033.1| TPR repeat protein [Flavobacteriales bacterium ALC-1]
gi|159875825|gb|EDP69884.1| TPR repeat protein [Flavobacteriales bacterium ALC-1]
Length = 276
Score = 59.0 bits (140), Expect = 7e-07, Method: Composition-based stats.
Identities = 45/251 (17%), Positives = 92/251 (36%), Gaps = 17/251 (6%)
Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85
++ + LV D E Y+ A + + ++K++ Q
Sbjct: 15 LYILLTCILLVSCSDFQKTLKSED-------VSEKYKMATELYEAEKWNKSFRLLEQILP 67
Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
+ A K + A Y+ +Y +++ +++I+ YP+S+ + +L Y
Sbjct: 68 KYRGKPQAEKLTFIHAMCLYNMKEYYRSSYHFDKFISVYPQSEKMKEAGFLAAKGYYYNS 127
Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
+Q+ T ++ M V + ++ Y+ A + +L K EI + Y +
Sbjct: 128 PVYSKEQKETVEAIEKMQLFVNAHPDTQYLDEANSIIKELDFKLEKKAFEIAKQYDLIRD 187
Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM----------DEAREVVSLIQE 255
Y A+I F L ++ A +EAM +A LA+ EA + ++
Sbjct: 188 YKASIKSFNNFLFDFPGATLRKEAMFYRFDAAYNLAVNSVNYLKEERLKEAIDYYESFKK 247
Query: 256 RYPQGYWARYV 266
Y +
Sbjct: 248 AYADSEFVGDA 258
>gi|325281824|ref|YP_004254366.1| outer membrane assembly lipoprotein YfiO [Odoribacter splanchnicus
DSM 20712]
gi|324313633|gb|ADY34186.1| outer membrane assembly lipoprotein YfiO [Odoribacter splanchnicus
DSM 20712]
Length = 266
Score = 59.0 bits (140), Expect = 7e-07, Method: Composition-based stats.
Identities = 54/254 (21%), Positives = 98/254 (38%), Gaps = 17/254 (6%)
Query: 28 FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87
F + + + S D VY+KA+ + + ++ +A + F
Sbjct: 7 FLLVIVLMTSCGEYQSLLKSNDYNL-------VYKKAIEYYNKGDYQRAMNLLDGVRSVF 59
Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147
A+ AF Y+ YQ A+ L +++I YPES + Y++G +
Sbjct: 60 VGQAKAQNIAYYRAFCSYNMKDYQIASDLFKQFIQTYPESSFAEECLYMMGFCDYKASPK 119
Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
DQ+ T+ ++ + RY S Y+ R++L+ K + Y R Y
Sbjct: 120 PRLDQQVTEKAIREFQLYLSRYPYSMRKDKVNTYMDEMRDKLSYKAYLSAKNYYLREHYK 179
Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA----------LMDEAREVVSLIQERY 257
AA+ Q L +Y +++ EE M L + +A + ARE + Y
Sbjct: 180 AAVISLQNCLKDYPGSKYREEIMYMLFVSKYQMAVNSVEDKKVERYNNAREEYYYFADEY 239
Query: 258 PQGYWARYVETLVK 271
P +A V+ + +
Sbjct: 240 PNSRYAADVKKMYE 253
>gi|268317073|ref|YP_003290792.1| outer membrane assembly lipoprotein YfiO [Rhodothermus marinus DSM
4252]
gi|262334607|gb|ACY48404.1| outer membrane assembly lipoprotein YfiO [Rhodothermus marinus DSM
4252]
Length = 1000
Score = 58.7 bits (139), Expect = 8e-07, Method: Composition-based stats.
Identities = 42/209 (20%), Positives = 83/209 (39%), Gaps = 22/209 (10%)
Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
++KA L ++QN++ A E F + R P A +L +A Y G+ +A +L
Sbjct: 436 EIAFQKAWLQYRQQNYAAASEAFLELYRQDPRGPKAGDALFWAAESFYQLGRLDRAEALF 495
Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
+Y+ +P+ +V+ +Y +G Y + + + +Q + + Y + +
Sbjct: 496 RDYLRSFPDGAHVEAAHYALGWVYFRQ--------QRYEAAIQAFQQFLRAYRRT---EE 544
Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
A Y +LA + RY Y A ++Y A+ ++ +AY
Sbjct: 545 AVPYRLDALLRLADSYYALKRYPEAIRYYRQAAA---EGESDY--------ALYQIGQAY 593
Query: 238 VALALMDEAREVVSLIQERYPQGYWARYV 266
+EA + + E +P+ W
Sbjct: 594 YNAGNYEEALRTFNRLLEEHPESTWREEA 622
Score = 54.8 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/201 (15%), Positives = 62/201 (30%), Gaps = 22/201 (10%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
+ +Y+ + N+ +A FN+ + P + ++L ++ + +Y
Sbjct: 577 AAEGESDYALYQIGQAYYNAGNYEEALRTFNRLLEEHPESTWREEALYQIGYIHFLNQEY 636
Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
QA + + P Y +G + ++ + + R++ERY
Sbjct: 637 DQAIAAYRRLLELAPNDPLAAKAQYGIGDA--------LFNAGRLEAAVNAYKRVLERYP 688
Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
SP+V A + + G A Y D +E
Sbjct: 689 QSPFVADAATSIHFA--------------LIAAGNEARAQALIDSFATAYPDTRIVDELR 734
Query: 231 ARLVEAYVALALMDEAREVVS 251
R EA +EA +
Sbjct: 735 FRRAEALYRSGRSEEAIRALE 755
Score = 50.6 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/231 (14%), Positives = 62/231 (26%), Gaps = 12/231 (5%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
+ + A ++ + +A F + +P A AR L A V Y G Y
Sbjct: 172 PNTRLAPQALLAMAYTQVEMGAYDEAARTFEVLAARYPAAPEARGLGLALAQVYYELGDY 231
Query: 111 QQAASLGE-----------EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
++A + + + Y + + + P + +
Sbjct: 232 RRAIDEVQRRLPDLKGEAQQQAWLLLAESYNQLRDSENAIVYYRRVLEDPDSPYYRRALY 291
Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK-EVEIGRYYLKRGEYVAAIPRFQLVLA 218
R R+ LA K E A+ F+ V+
Sbjct: 292 GLAWNYYFEGVYQWAADHFRQVREGRRDTLAMKATYYEAVCRKLAREPQQALELFRTVVL 351
Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
+ D+ A A L + +EA + + YP +
Sbjct: 352 EWPDSPLAPHAQYELALLLYEMRRWEEAHDAFDFLVRTYPDSELLGDALRM 402
Score = 49.0 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 30/198 (15%), Positives = 63/198 (31%), Gaps = 22/198 (11%)
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
+ A+ + ++ + + F Q +P ++L A + + G+ +AA+L +
Sbjct: 34 FAHALALHSDGFYTLSAQTFAQFRSTYPDDPRVPEALFYEAEARLALGQTDEAAALLRVF 93
Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
+YP + +D Q + +
Sbjct: 94 AARYPTHPL--------VYEAQLALGKYFFDTGRYDDARQAFGQALR------------- 132
Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
V Q A + + G AI ++ + Y + A +A+ + V +
Sbjct: 133 -PGVPATQAARALFWMAESAQRLGRPAEAIGYYRRLADTYPNTRLAPQALLAMAYTQVEM 191
Query: 241 ALMDEAREVVSLIQERYP 258
DEA ++ RYP
Sbjct: 192 GAYDEAARTFEVLAARYP 209
Score = 41.7 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 29/222 (13%), Positives = 61/222 (27%), Gaps = 22/222 (9%)
Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
+ + +Y+ + Q + +A + + P +A K+ ++AG
Sbjct: 612 EHPESTWREEALYQIGYIHFLNQEYDQAIAAYRRLLELAPNDPLAAKAQYGIGDALFNAG 671
Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
+ + A + + + +YP+S V + + +
Sbjct: 672 RLEAAVNAYKRVLERYPQSPFVADAATSIHFA--------LIAAGNEARAQALIDSFATA 723
Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
Y ++ V RF + E I A E
Sbjct: 724 YPDTRIVDELRFRRAEALYRSGRSEEAIRALEAFVRGSHAPDLMG--------------E 769
Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
A+ L Y L DEA + + + + L+
Sbjct: 770 ALYYLATLYAEQELYDEAERTLQQLLAAHAEHRRMPEALLLL 811
Score = 40.5 bits (92), Expect = 0.24, Method: Composition-based stats.
Identities = 33/225 (14%), Positives = 74/225 (32%), Gaps = 16/225 (7%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
D + Y A + + +P + + F +AG
Sbjct: 651 PNDPLAAKAQYGIGDALFNAGRLEAAVNAYKRVLERYPQSPFVADAATSIHFALIAAGNE 710
Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM------------IRDVPYDQRATKLM 158
+A +L + + T YP+++ VD + + + + +
Sbjct: 711 ARAQALIDSFATAYPDTRIVDELRFRRAEALYRSGRSEEAIRALEAFVRGSHAPDLMGEA 770
Query: 159 LQYMSRIVERYTNSPYVKGARFY---VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
L Y++ + + ++ + +G LK+ Y AA+ F+
Sbjct: 771 LYYLATLYAEQELYDEAERTLQQLLAAHAEHRRMPEALLLLGNVQLKQERYEAALVSFRR 830
Query: 216 VLANYSD-AEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
+ + + +E A+ A + L EAR+ ++ Q R+P+
Sbjct: 831 LASMAPERSELLARALYGQSVALLELGRFAEARQALTEAQARFPE 875
Score = 37.1 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 9/42 (21%), Positives = 14/42 (33%)
Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
A A+ + E+ L EA + + YP A
Sbjct: 139 QAARALFWMAESAQRLGRPAEAIGYYRRLADTYPNTRLAPQA 180
>gi|325107898|ref|YP_004268966.1| hypothetical protein Plabr_1332 [Planctomyces brasiliensis DSM
5305]
gi|324968166|gb|ADY58944.1| hypothetical protein Plabr_1332 [Planctomyces brasiliensis DSM
5305]
Length = 532
Score = 58.7 bits (139), Expect = 9e-07, Method: Composition-based stats.
Identities = 25/226 (11%), Positives = 55/226 (24%), Gaps = 17/226 (7%)
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF----------VQYSAGKY 110
YEKA ++ +F A F ++D+ Y
Sbjct: 83 YEKAQAMYEQGDFKGAETAFEDITQDYATDESGFFRRRRLGNILKPKSALQASYYDNPLV 142
Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY--MSRIVER 168
+ + + E + + + VY + Y +R + + +
Sbjct: 143 EDSLFMLAESRYKQEKLPGAESVYIQLLQQYPNTRHLDKSTERLFDIAMTWMDFKTTTSD 202
Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP-----RFQLVLANYSDA 223
+ E + + N
Sbjct: 203 EVKVASHSDTGRASKPEVVSNSDYERPSFFNMFDGKRPWTDTEGRALEALKAIWMNDPTG 262
Query: 224 EHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
A++A+ Y+ + EA E +++E +P + L
Sbjct: 263 PLADDALMLTASHYLRVGRHAEASETFRMLREEFPDSPHLKDAYVL 308
Score = 37.1 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 13/104 (12%), Positives = 30/104 (28%)
Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
+ Y +G + + +R + + A+Y D
Sbjct: 83 YEKAQAMYEQGDFKGAETAFEDITQDYATDESGFFRRRRLGNILKPKSALQASYYDNPLV 142
Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
E+++ L E+ + A V + ++YP +
Sbjct: 143 EDSLFMLAESRYKQEKLPGAESVYIQLLQQYPNTRHLDKSTERL 186
>gi|328952823|ref|YP_004370157.1| Extracellular ligand-binding receptor [Desulfobacca acetoxidans DSM
11109]
gi|328453147|gb|AEB08976.1| Extracellular ligand-binding receptor [Desulfobacca acetoxidans DSM
11109]
Length = 614
Score = 58.7 bits (139), Expect = 9e-07, Method: Composition-based stats.
Identities = 41/261 (15%), Positives = 86/261 (32%), Gaps = 14/261 (5%)
Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
L L + + G + + +R + ++A F + +++A
Sbjct: 3 NLISLKLFVLLPLIFLA-FGCAAM----LPPSTGDLIRNDAALLQQADNFYRAHRYNEAL 57
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
+ Q + P + + L +A + G + QA + E + +S Y V
Sbjct: 58 ATYEQYLQTSPQGVQWQHAWLRTAELYGIKGDWLQARARYERILAVPVDSGLALKARYGV 117
Query: 138 GMSYAQMIRDVPYDQRATKLM---------LQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
G + ++ + ++ L + + + E S A + +
Sbjct: 118 GQAQYKLGNFLEAERILENLTASNLSGDLRFKTNALLTELSLQSRNFPQACSRLLLVEKD 177
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
L E E + R AA P + + Y D + +L+ ++A E
Sbjct: 178 LPYGEEEWYQDLKSRLLERAAAPELEKLADLYRDTPLTPALLLQLIRLETQAGRPEKAEE 237
Query: 249 VVSLIQERYPQGYWARYVETL 269
++ +Q R+PQ A L
Sbjct: 238 WLATLQRRFPQSPEAVLAAKL 258
>gi|283850645|ref|ZP_06367932.1| outer membrane assembly lipoprotein YfiO [Desulfovibrio sp.
FW1012B]
gi|283573888|gb|EFC21861.1| outer membrane assembly lipoprotein YfiO [Desulfovibrio sp.
FW1012B]
Length = 245
Score = 58.3 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 42/188 (22%), Positives = 79/188 (42%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
+E+YE + E+++ A YF + +PF+ + A + Y
Sbjct: 31 PPPEDTAQELYESGRQAMSEKDYYGAIGYFMKLKDRYPFSPYTPMGTVALADAYFLTEDY 90
Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
AA +E+ + +P S+ + YV Y +G+S + + Q + LQY + + +
Sbjct: 91 GPAAETYKEFESVHPRSEEIPYVLYQIGVSNFKRSESIDMPQGNLQEALQYFYLLEQTFP 150
Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
++ Y K A Y+ R +LA E+ + +Y + ++ AA R+ N+ D E E
Sbjct: 151 DTDYGKEAAEYIRRCRKRLAEHELFVADFYWRTDQFGAAWKRYMYTAENFKDLEEVLEYS 210
Query: 231 ARLVEAYV 238
E
Sbjct: 211 KLRAELSY 218
>gi|313672442|ref|YP_004050553.1| outer membrane assembly lipoprotein yfio [Calditerrivibrio
nitroreducens DSM 19672]
gi|312939198|gb|ADR18390.1| outer membrane assembly lipoprotein YfiO [Calditerrivibrio
nitroreducens DSM 19672]
Length = 254
Score = 58.3 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 48/219 (21%), Positives = 98/219 (44%), Gaps = 11/219 (5%)
Query: 35 LVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR 94
+VG + E ++ + +++ + KA E + +A
Sbjct: 17 VVGCSSKEPPKK---------PAEEWLKEGTQYFQKKKYQKAAEALENAIIEAESPELAA 67
Query: 95 KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
++ L+ + +Y+QA +EY+ YP+S + Y +G+SY + V D
Sbjct: 68 QAQLLLGDSYFLMKEYEQAIPSYKEYLNIYPDSPDAKRAMYRLGLSYYNQVDTVDRDLEN 127
Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
+L L+ +++ E+Y + +N LA KE+ + ++Y + E +AI R +
Sbjct: 128 AELALKTFTQLKEKYPEFAKENKVDKKIVELKNLLAEKELYVAKFYFRIKEPSSAIKRLE 187
Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
++ N+ D + E + L E+Y + D+A+EVV+L+
Sbjct: 188 YLVKNFKDTKSYPEGLIMLAESY--VDKPDKAQEVVNLL 224
Score = 37.9 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 8/78 (10%)
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA--------LA 241
A ++ +G Y EY AIP ++ L Y D+ A+ AM RL +Y L
Sbjct: 67 AQAQLLLGDSYFLMKEYEQAIPSYKEYLNIYPDSPDAKRAMYRLGLSYYNQVDTVDRDLE 126
Query: 242 LMDEAREVVSLIQERYPQ 259
+ A + + ++E+YP+
Sbjct: 127 NAELALKTFTQLKEKYPE 144
>gi|271499766|ref|YP_003332791.1| tol-pal system protein YbgF [Dickeya dadantii Ech586]
gi|270343321|gb|ACZ76086.1| tol-pal system protein YbgF [Dickeya dadantii Ech586]
Length = 270
Score = 58.3 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/208 (12%), Positives = 60/208 (28%), Gaps = 14/208 (6%)
Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
+ + + ++ E Q + G S A+ +
Sbjct: 74 RGQIQENQYQLNQVVERQKQIYQQIDSLGSQSGGQSSSGASSAGNAAASAPAAASDAGAA 133
Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
+ + + + +++ + V+RY +S Y A +++
Sbjct: 134 SNTGTSSAAPAMTGDANTDYNAAASLVLEKKQYDQAIAAFQNFVKRYPDSTYQPNANYWL 193
Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242
K+ + F V+ NY + A EAM ++
Sbjct: 194 GQLFYNKGKKD--------------DSAYYFANVVKNYPKSPKAPEAMFKVGLIMQEKGQ 239
Query: 243 MDEAREVVSLIQERYPQGYWARYVETLV 270
D+A+ V + + YP A+ + +
Sbjct: 240 TDKAKAVYQQVIKNYPNTDGAKQAQKRL 267
>gi|121999147|ref|YP_001003934.1| DNA uptake lipoprotein-like protein [Halorhodospira halophila SL1]
gi|121590552|gb|ABM63132.1| DNA uptake lipoprotein-like protein [Halorhodospira halophila SL1]
Length = 256
Score = 57.9 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 44/217 (20%), Positives = 83/217 (38%), Gaps = 10/217 (4%)
Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
+ R +Y +A+ ++ + A ++ +P AR++LL +A+V+Y G+Y Q
Sbjct: 35 EREQARSLYAEALEAVERGDLEAAQGMLDELQEAYPETRHARQALLEAAYVEYRLGQYPQ 94
Query: 113 AASLGEEYITQYPESKNVDY----------VYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
A E + Q +++ + + D + Y
Sbjct: 95 AIERAEIFHRQAAQTEEQADDEDLRYALYLRAAAAHALWDATEGEAERDAAGARRAFGYY 154
Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
IV Y S + A + R+ +A +E+ R L G Y A R + Y
Sbjct: 155 RDIVRDYPESERAEEAARRMNEIRSDVAEEELRRARRRLDDGAYAEAAERGAWIAEQYPG 214
Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
+ A +A+A V+A L EA +++ ++P
Sbjct: 215 QQAAADALALQVDALERLGREREAEATRRMLEIKHPD 251
>gi|300775415|ref|ZP_07085277.1| conserved hypothetical protein [Chryseobacterium gleum ATCC 35910]
gi|300506155|gb|EFK37291.1| conserved hypothetical protein [Chryseobacterium gleum ATCC 35910]
Length = 331
Score = 57.9 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 43/261 (16%), Positives = 91/261 (34%), Gaps = 19/261 (7%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K+ L +F V V + + + + A ++ + A
Sbjct: 1 MKKYILGLFAVAVVTSCVS---------QQERAMRSADKDFILKAANENFAKKKWKNALA 51
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+++ + +A+ Y Y+ A + + +P+ + Y+
Sbjct: 52 LYDRLANLVAGTDDFPNVGFNTAYANYYDKSYKLAGHQFKNFAVSFPKDPRAEEAAYMSA 111
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
+ Y + D DQ +T+L + + + Y NS K + +L K E R
Sbjct: 112 LCYYEGSMDYNLDQSSTELAINELQDFLNNYPNSERSKNISQLIDELSYKLEFKAYENAR 171
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM----------DEARE 248
Y K GEY AA F VL ++ + + ++++ LA+ + A
Sbjct: 172 QYYKMGEYKAANVAFDNVLEDFPSTKLRSKIYDYIMKSRYELAMKSVYNLKEERIESALT 231
Query: 249 VVSLIQERYPQGYWARYVETL 269
L+++ P +++ L
Sbjct: 232 YTKLVEKELPDTEYSKTAVDL 252
>gi|145641511|ref|ZP_01797089.1| conserved hypothetical lipoprotein [Haemophilus influenzae R3021]
gi|145273802|gb|EDK13670.1| conserved hypothetical lipoprotein [Haemophilus influenzae 22.4-21]
Length = 124
Score = 57.5 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/102 (26%), Positives = 45/102 (44%)
Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
+ +V + NSPY + A + ++ LA E+EI ++Y KR +VA R
Sbjct: 1 MRTAFSNFQNLVRVFPNSPYAQDALARMAYIKDALARHELEIAKFYAKRKAWVAVANRVV 60
Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
+L Y D + E + + EAY + L A + +I
Sbjct: 61 GMLKQYPDTKATYEGLFLMQEAYEKMGLTALANDTQKIIDAN 102
>gi|283780651|ref|YP_003371406.1| hypothetical protein Psta_2881 [Pirellula staleyi DSM 6068]
gi|283439104|gb|ADB17546.1| Tetratricopeptide TPR_2 repeat protein [Pirellula staleyi DSM 6068]
Length = 1076
Score = 57.5 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/252 (12%), Positives = 83/252 (32%), Gaps = 22/252 (8%)
Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQ-REVYEKAVLFLKEQNFSKAYEYFNQCS 84
+ F +A G ++ + + R+ + A F F A + +
Sbjct: 11 VVFLLAGMLAGGALSFTTVAQAQEKPAESPPAARQKFVDAGNFQNNGAFDLAVDEWQAFL 70
Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
+ +P +A K+ K ++A + E+ + YP+ + ++ + +G +
Sbjct: 71 KAYPTDPLAGKARYYLGVCLLQQKKPEEALAAFEKVLADYPKFEQMEDLLVNLGSCQYSL 130
Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204
+ +++ + + S +V+ + FY K +
Sbjct: 131 GQ--AGKAEMFGKAATSYAKLAKDFPKSKFVEESLFYQGESLYSAGKKGESLA------- 181
Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA- 263
++ ++ ++ + EE + L L + A + + +P+ A
Sbjct: 182 -------PYEQLIKDFPKSTRREETLYALGCTQEELGKYEPALATFETLLKEFPESKLAT 234
Query: 264 ----RYVETLVK 271
R E L++
Sbjct: 235 EVTMRKAEALLQ 246
Score = 48.6 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 26/237 (10%), Positives = 74/237 (31%), Gaps = 15/237 (6%)
Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
D + + +Y A L + F +A ++ + + A + + ++A
Sbjct: 405 KFAADHASHEQAPLALYSAAFTALDLKKFDEALKHAADFEKAYATAPLLPDTKYVAAEAN 464
Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDY----------VYYLVGMSYAQMIRDVPYDQRA 154
GK +A + E + ++ D + + + ++
Sbjct: 465 LQLGKLPEAEAAYRELVEKFASHAEADTWKIRLARTLLLEKKYDDLVTTVTPQITTLKKH 524
Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR-----YYLKRGEYVAA 209
+ + ++ + + ++ + K + AA
Sbjct: 525 ELVAEAHFLVGSAQFFADKFKEAETSLNASLAADPKWRQADETMLLVARTQRKLDQVDAA 584
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
Q ++ +++ + ++A R+ E A + S++ +YP+ +A Y
Sbjct: 585 KSTLQKLMTDFASSTVLDQAHYRMGEILYAANDFAGSATEYSVVVTKYPESPFAPYA 641
Score = 42.5 bits (97), Expect = 0.058, Method: Composition-based stats.
Identities = 20/203 (9%), Positives = 51/203 (25%), Gaps = 21/203 (10%)
Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
+ D + +++ + A + + + P + + +
Sbjct: 774 EKIAKDYPESPLAAEAWFRVGEDQYEKKTYDVAVKSYTEAMGKKPAGELGEMTSYKLGWA 833
Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
+ +YQ A + +P ++ +M S
Sbjct: 834 NFQLKQYQPALDSFSSQVKDHPAGPLSADGIFMKAECLFRMENYKDAYPAYEAASKTKFS 893
Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
+ G+ + ++ A+ + A ++D+
Sbjct: 894 ---------------------SPTYEMLTLLHGGQSAAQLSKWDDALKLLSQIPAKFADS 932
Query: 224 EHAEEAMARLVEAYVALALMDEA 246
EA + A L +DEA
Sbjct: 933 PLLPEATYEIGWAKQNLGKLDEA 955
Score = 42.1 bits (96), Expect = 0.075, Method: Composition-based stats.
Identities = 24/212 (11%), Positives = 50/212 (23%), Gaps = 22/212 (10%)
Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
V +Y + LK + F+KA E F + S
Sbjct: 621 SATEYSVVVTKYPESPFAPYALYGQGWSLLKSKEFAKAVESFTSVIDKHASHELVADSQY 680
Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
A + AG + + + Y+ +
Sbjct: 681 GRAVARRQAGDAAGSLADFDAYLKKELTPDQ--------KCDALYERGLAQVAIMKYADA 732
Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
+ +++ + + + L + F+ +
Sbjct: 733 VASFDELLKVNAKYSAADKVLYELAWAQKSLDKHAEAVPL--------------FEKIAK 778
Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
+Y ++ A EA R+ E D A +
Sbjct: 779 DYPESPLAAEAWFRVGEDQYEKKTYDVAVKSY 810
Score = 37.5 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 29/228 (12%), Positives = 68/228 (29%), Gaps = 22/228 (9%)
Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
+ + + + D + + Y + +F+ + ++ +P + A +L
Sbjct: 584 AKSTLQKLMTDFASSTVLDQAHYRMGEILYAANDFAGSATEYSVVVTKYPESPFAPYALY 643
Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
+ + ++ +A I ++ + V Y ++ Q
Sbjct: 644 GQGWSLLKSKEFAKAVESFTSVIDKHASHELVADSQYGRAVARRQAGDAAGSLADF---- 699
Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
A + +Q E G + +Y A+ F +L
Sbjct: 700 ------------------DAYLKKELTPDQKCDALYERGLAQVAIMKYADAVASFDELLK 741
Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
+ A++ + L A +L EA + I + YP+ A
Sbjct: 742 VNAKYSAADKVLYELAWAQKSLDKHAEAVPLFEKIAKDYPESPLAAEA 789
>gi|206603307|gb|EDZ39787.1| Probable DNA uptake lipoprotein [Leptospirillum sp. Group II '5-way
CG']
Length = 243
Score = 57.1 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 39/190 (20%), Positives = 80/190 (42%)
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
++ + F +LL A Y G + +A + ++ +P + Y +GM
Sbjct: 40 DEHTYSFRTHAYGTSALLDEASRFYFKGDFIEARGEYKRFLELHPTHPLAAFAQYRMGMC 99
Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
I V D + L ++++ + +S YV A+ + V R++L+ +G +Y
Sbjct: 100 DYYQILSVDRDPTPVRKALADFQKVIDEFPDSSYVGKAQKKIAVCRDRLSRVHFYVGYFY 159
Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
K + AA RF +L Y D+ + A + L +A ++ + +++P+
Sbjct: 160 YKTKRFKAASYRFHTILLKYPDSRKYDRAEFYFALSKFHLKQRHQAVRLLKRLIQQFPKS 219
Query: 261 YWARYVETLV 270
+AR L+
Sbjct: 220 KYARKSSILL 229
>gi|317491199|ref|ZP_07949635.1| tol-pal system protein YbgF [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316920746|gb|EFV42069.1| tol-pal system protein YbgF [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 267
Score = 57.1 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/119 (16%), Positives = 45/119 (37%), Gaps = 14/119 (11%)
Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
++ + V++Y +S Y A +++ K+ +
Sbjct: 160 KKQNDQAITAFQSFVKQYPDSTYQPNANYWLGQLFYNKGKKD--------------DSAY 205
Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
F +V+ NY + A EAM ++ +D+A+ V + ++YP A+ + +
Sbjct: 206 YFAVVVKNYPKSPKAPEAMYKVGVIMQEKGQVDKAKAVYQQVIKQYPTSDSAKQAQKRI 264
>gi|258406026|ref|YP_003198768.1| outer membrane assembly lipoprotein YfiO [Desulfohalobium retbaense
DSM 5692]
gi|257798253|gb|ACV69190.1| outer membrane assembly lipoprotein YfiO [Desulfohalobium retbaense
DSM 5692]
Length = 244
Score = 57.1 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 40/190 (21%), Positives = 85/190 (44%), Gaps = 1/190 (0%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
+E+ E + E+++ A EYF + +PF+ + L + +Y
Sbjct: 31 KPPEDTAQELAEAGRAAMAEKDYDAAIEYFTKLKERYPFSPYTPDAELALGDAYFLDEQY 90
Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
+ A +E+ + +P K + +V + +G++ + + Q + LQY R+ + +
Sbjct: 91 KAAVDTYKEFESLHPRHKAIPHVLFQIGLANFKQFDSIDRPQTNMEEALQYFRRVQQGFP 150
Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE-A 229
+PY + A Y+T R A E+ + +Y +R ++ AA R+ V +++ ++ A
Sbjct: 151 ETPYAEKAGDYITQCRRYQAEHELFVADFYWRREDFGAAWKRYAYVAEEFAELPKIQDYA 210
Query: 230 MARLVEAYVA 239
R AY+
Sbjct: 211 RDRQEIAYLR 220
>gi|311748467|ref|ZP_07722252.1| putative TPR repeat protein [Algoriphagus sp. PR1]
gi|311302789|gb|EAZ81230.2| putative TPR repeat protein [Algoriphagus sp. PR1]
Length = 296
Score = 57.1 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 37/260 (14%), Positives = 79/260 (30%), Gaps = 24/260 (9%)
Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85
I I L + + + E+Y A + +E ++KA +++
Sbjct: 6 IIVLIVGIALTACGPFNKLEKSTNW-------EELYAGANKYYQEGEYNKAIILYDKVLP 58
Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
+ A + A + +Y +AA + Y S + ++ +
Sbjct: 59 VIRGSEKAELADYNYANCHFKTKRYIEAAGYFNNFYRTYNRSPLAEEALFMRAYALYLDA 118
Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVK-------GARFYVTVGRNQLAAKEVEIGR 198
D DQ++++ + + + V + S + Q A +
Sbjct: 119 PDFNLDQQSSQEAVGAIQQFVTLFPGSASYERAMEMLTDLEKRFEEKAYQQAEMYYTLKD 178
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD----------EARE 248
A Q +Y ++++ EE +LVE A +A
Sbjct: 179 GLYPGQNMRACAISIQNFAKDYPESKYNEELAYKLVEVTTKYAENSVYAKKEERLTDALR 238
Query: 249 VVSLIQERYPQGYWARYVET 268
+ +YP+ + VE
Sbjct: 239 FAGVFYRKYPESAYTSEVEK 258
>gi|77918025|ref|YP_355840.1| hypothetical protein Pcar_0410 [Pelobacter carbinolicus DSM 2380]
gi|77544108|gb|ABA87670.1| conserved hypothetical protein [Pelobacter carbinolicus DSM 2380]
Length = 222
Score = 57.1 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 40/90 (44%)
Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
+ N + +G Y G+Y A+ FQ V+ NY + A EA+ R+ A
Sbjct: 129 ESFLDHFPANNYAGNAQFWLGECYYNLGQYDRAVQEFQKVVDNYPLSGKAPEALLRMAPA 188
Query: 237 YVALALMDEAREVVSLIQERYPQGYWARYV 266
L ++AR+ + +Q+RYP AR
Sbjct: 189 LRQLNQYEKARQALQALQQRYPNSAAARKA 218
Score = 48.3 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 29/82 (35%), Gaps = 2/82 (2%)
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
A K G Y I F+ L ++ +A A L E Y L D A +
Sbjct: 105 ATKIYLKAFGDYASGRYHQGIKGFESFLDHFPANNYAGNAQFWLGECYYNLGQYDRAVQE 164
Query: 250 VSLIQERYPQGYWARYVETLVK 271
+ + YP + E L++
Sbjct: 165 FQKVVDNYPLSG--KAPEALLR 184
>gi|333030111|ref|ZP_08458172.1| outer membrane assembly lipoprotein YfiO [Bacteroides coprosuis DSM
18011]
gi|332740708|gb|EGJ71190.1| outer membrane assembly lipoprotein YfiO [Bacteroides coprosuis DSM
18011]
Length = 272
Score = 56.7 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 50/266 (18%), Positives = 87/266 (32%), Gaps = 22/266 (8%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
I +A L + S D YE A + + ++KA
Sbjct: 1 MKKNIIITLLAAIVLSSCGQYSKLLKSKDYEYK-------YEAAKTYYAKGQYNKASTLL 53
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
N+ + F A +S+ + + Y AA+ Y T YP + + Y G S
Sbjct: 54 NELTMIFKGTDKAEESVYLLGMCYMNQKDYTTAATTFITYYTSYPSGRYAEIARYQAGKS 113
Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV-----E 195
+ DQ +T +Q + +E Y NS A + + +L KE
Sbjct: 114 LYLDTPEPRLDQTSTYKAIQELHLYLEEYPNSARKTEAEDMMFELQEKLVKKEYLASKLY 173
Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD----------E 245
Y + I Q L +Y + EE ++ A A+A +
Sbjct: 174 YDLGLYMGNNYQSCIITAQNTLNDYPYTKQREELSVLILRAKYAIAENSVEEKKDERYRD 233
Query: 246 AREVVSLIQERYPQGYWARYVETLVK 271
A + + +P+ + + E + K
Sbjct: 234 AIDEYYAFKNEFPESKYVKEAEKIFK 259
>gi|300112860|ref|YP_003759435.1| tol-pal system protein YbgF [Nitrosococcus watsonii C-113]
gi|299538797|gb|ADJ27114.1| tol-pal system protein YbgF [Nitrosococcus watsonii C-113]
Length = 255
Score = 56.7 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/118 (18%), Positives = 49/118 (41%), Gaps = 14/118 (11%)
Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213
+ + + +++Y +S Y A++++ R L ++ A+ F
Sbjct: 144 HYEEAIAAFDQFLQQYPDSRYRPNAQYWLGEARYMLG--------------DFNDAVGTF 189
Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
Q ++ Y ++ +AM + AY LA ++A+ + RYP +R E ++
Sbjct: 190 QALVEQYPESAKVPDAMLKQGLAYYELAQWEQAKAQFQAVMTRYPASTASRLAEERLE 247
Score = 51.3 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
K G Y AI F L Y D+ + A L EA L ++A + E+YP+
Sbjct: 141 KEGHYEEAIAAFDQFLQQYPDSRYRPNAQYWLGEARYMLGDFNDAVGTFQALVEQYPES- 199
Query: 262 WARYVETLVK 271
A+ + ++K
Sbjct: 200 -AKVPDAMLK 208
Score = 44.0 bits (101), Expect = 0.025, Method: Composition-based stats.
Identities = 23/128 (17%), Positives = 46/128 (35%), Gaps = 8/128 (6%)
Query: 43 SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102
+ V + Y+ A+ LKE ++ +A F+Q + +P + +
Sbjct: 115 ETADEVAEEVLVDSGEQAYQVALGLLKEGHYEEAIAAFDQFLQQYPDSRYRPNAQYWLGE 174
Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
+Y G + A + + QYPES V G++Y ++ +
Sbjct: 175 ARYMLGDFNDAVGTFQALVEQYPESAKVPDAMLKQGLAYYEL--------AQWEQAKAQF 226
Query: 163 SRIVERYT 170
++ RY
Sbjct: 227 QAVMTRYP 234
>gi|251771637|gb|EES52212.1| DNA uptake lipoprotein-like protein [Leptospirillum
ferrodiazotrophum]
Length = 234
Score = 56.7 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 43/174 (24%), Positives = 75/174 (43%)
Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
LL A Y G + +A + ++ +P + Y +GM I + D T+
Sbjct: 51 LLDEASRFYFKGDFIEARGEYKRFLELHPTHPLAAFAQYRIGMCDFYQIGGIDRDPSPTE 110
Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
L ++++ Y +SPYV+ A+ V R + A +G +Y + Y AA RF +
Sbjct: 111 KALADFQKVIDEYPDSPYVEKAQKKVAFCRERKARLHFYVGSFYYRTKFYKAAAYRFHSI 170
Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
L Y D++ A +A ++A EV+ I + P +AR + L+
Sbjct: 171 LLKYPDSKIYPRAQYNYAKALFHEKKREKAAEVMRTIVAQSPGSTYARKAQILL 224
>gi|242238604|ref|YP_002986785.1| tol-pal system protein YbgF [Dickeya dadantii Ech703]
gi|242130661|gb|ACS84963.1| tol-pal system protein YbgF [Dickeya dadantii Ech703]
Length = 269
Score = 56.7 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 19/120 (15%), Positives = 43/120 (35%), Gaps = 14/120 (11%)
Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
+++ + V++Y +S Y A +++ K+ +
Sbjct: 161 EKKQYDQAITAFQNFVKKYPDSTYQPNANYWLGQLFYNKGKKD--------------DSA 206
Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
F V+ NY + A EAM ++ D+A+ + + + YP A+ + +
Sbjct: 207 YYFANVVKNYPKSPKASEAMFKVGVIMQEKGQSDKAKAIYQQVVKNYPNTDGAKQAQKRL 266
Score = 49.8 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 14/70 (20%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
++ +Y AI FQ + Y D+ + A L + + D++ + + + YP+
Sbjct: 161 EKKQYDQAITAFQNFVKKYPDSTYQPNANYWLGQLFYNKGKKDDSAYYFANVVKNYPKSP 220
Query: 262 WARYVETLVK 271
+ E + K
Sbjct: 221 --KASEAMFK 228
>gi|291515357|emb|CBK64567.1| DNA uptake lipoprotein [Alistipes shahii WAL 8301]
Length = 249
Score = 56.7 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 40/226 (17%), Positives = 93/226 (41%), Gaps = 10/226 (4%)
Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
+Y KA+ + +++ + +A F + + +A +Y + A++
Sbjct: 9 QPELIYSKALEYYQKEKWQRASTLFEGVQHYYTGSSREDSISFFNARCKYKNRDFDTAST 68
Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
L +++ ++ S ++ + + + + DQ T L ++ + RY S V
Sbjct: 69 LLDDFRRKFGRSAFIEDAEGMYALCFYYLSPGPSRDQTMTGHALIAINEFMSRYPQSDRV 128
Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
+ R T +L K Y K G+Y +AI F+ L Y +++ EE M +V+
Sbjct: 129 ENFRKINTELTERLHEKAYLNAYTYYKTGKYKSAIVAFKNALKQYPESKRREEIMYLIVD 188
Query: 236 AYVALALMDEARE----VVSLI------QERYPQGYWARYVETLVK 271
+ LA + + +S++ +E +P+ + ++ + +
Sbjct: 189 SGYRLASNSISEKQTDRYLSMLDSYLSFKEEFPESTHIKSLDRMAQ 234
>gi|294637419|ref|ZP_06715710.1| putative tol-pal system protein YbgF [Edwardsiella tarda ATCC
23685]
gi|291089412|gb|EFE21973.1| putative tol-pal system protein YbgF [Edwardsiella tarda ATCC
23685]
Length = 252
Score = 56.7 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/201 (12%), Positives = 56/201 (27%), Gaps = 14/201 (6%)
Query: 70 EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129
+ NQ SL Q + + P +
Sbjct: 65 RGQIQENQYQLNQIVERQKQIYQQIDSLSSGNAAQGNTPAASAQPADSTAPAASAPAAAP 124
Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
+ D+ ++ + +++Y +S Y A +++
Sbjct: 125 QAAAASGDANTDYNRAVDLVLVKKQNDQAISAFQTFIKQYPDSTYQPNANYWLGQLYYSK 184
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
K+ A + +V+ NY + A E+M ++ D+A V
Sbjct: 185 GKKD--------------DAAYYYAVVVKNYPKSPKAPESMYKVGVIMQEKGQSDKAHAV 230
Query: 250 VSLIQERYPQGYWARYVETLV 270
+ ++YP A+ + +
Sbjct: 231 FQQVLKQYPNSEAAKLAQKRL 251
>gi|303245508|ref|ZP_07331792.1| outer membrane assembly lipoprotein YfiO [Desulfovibrio
fructosovorans JJ]
gi|302493357|gb|EFL53219.1| outer membrane assembly lipoprotein YfiO [Desulfovibrio
fructosovorans JJ]
Length = 245
Score = 56.3 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 39/172 (22%), Positives = 78/172 (45%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
+E+YE + E+++ A ++F + +PF+ + A + Y
Sbjct: 31 PPPEDTAQELYEAGRQAMSEKDYYGAAKFFIKLKDRYPFSPYTPMGTIALADAYFLTEDY 90
Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
AA +E+ + +P S+ + YV Y +G+S + + Q + LQY + + +
Sbjct: 91 GPAAETYKEFESVHPRSEEIPYVLYQIGVSNFKRSESIDMPQGNLQEALQYFYLLQQTFP 150
Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
++ Y K A Y+ R +LA E+ + +Y + +Y AA R+ + N+ D
Sbjct: 151 DTEYGKEAAEYIRRCRKRLAEHELFVADFYWRTDQYGAAWKRYMYTVENFKD 202
>gi|124516467|gb|EAY57975.1| probable DNA uptake lipoprotein [Leptospirillum rubarum]
Length = 243
Score = 56.3 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 38/190 (20%), Positives = 80/190 (42%)
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
++ + F +LL A Y G + +A + ++ +P + Y +GM
Sbjct: 40 DEHTYSFRTHAYGTSALLDEASRFYFKGDFIEARGEYKRFLELHPTHPLAAFAQYRMGMC 99
Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
I V D + L ++++ + +S YV A+ + + R++L+ +G +Y
Sbjct: 100 DYYQILSVDRDPTPVRKALSDFQKVIDEFPDSNYVGKAQKKIAICRDRLSRVHFYVGYFY 159
Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
K + AA RF +L Y D+ + A + L +A ++ + +++P+
Sbjct: 160 YKTKRFKAASYRFHTILLKYPDSRKYDRAEFYFALSKFHLKQRHQAVHLLKRLIQQFPKS 219
Query: 261 YWARYVETLV 270
+AR L+
Sbjct: 220 KYARKSSILL 229
>gi|312129473|ref|YP_003996813.1| outer membrane assembly lipoprotein yfio [Leadbetterella byssophila
DSM 17132]
gi|311906019|gb|ADQ16460.1| outer membrane assembly lipoprotein YfiO [Leadbetterella byssophila
DSM 17132]
Length = 296
Score = 56.3 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 48/267 (17%), Positives = 90/267 (33%), Gaps = 24/267 (8%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
+ + V E Y AV + K+ ++ KA F
Sbjct: 1 MNLRLYPLLVLSVLIFSCS------REFSRVQKKGTTEEKYAAAVKYYKKADYYKASVLF 54
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
+ + A ++ +A+ Y G YQ ++ L + Y S + YY+ S
Sbjct: 55 EEIAPLLKGDSTAERTQFYNAYANYYLGNYQMSSYLFNTFYATYNNSPFAEEAYYMYAYS 114
Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
+ DQ T + + + Y +S Y + R +L K E + Y
Sbjct: 115 MYKDTPPYNLDQTNTLTAIDALQTFINSYPDSKYADDCAKNLQDLRERLERKSYEKAKQY 174
Query: 201 LKRG--------EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL---------- 242
K Y+A++ ++ D+++ EE A + A LA
Sbjct: 175 FKTRDPSWGGLSNYLASVVTIDNFKKDFPDSKYNEELSAMQITAQYELADLSLFNKQKER 234
Query: 243 MDEAREVVSLIQERYPQGYWARYVETL 269
++A E + ++YP + + +E L
Sbjct: 235 YNQAIEYYNKFIDKYPNSKYLKDLEKL 261
>gi|116748203|ref|YP_844890.1| TPR repeat-containing protein [Syntrophobacter fumaroxidans MPOB]
gi|116697267|gb|ABK16455.1| Tetratricopeptide TPR_2 repeat protein [Syntrophobacter
fumaroxidans MPOB]
Length = 264
Score = 56.3 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 38/258 (14%), Positives = 71/258 (27%), Gaps = 4/258 (1%)
Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK-- 75
++FA + F V G S+T + ++E E+ + Q+
Sbjct: 4 NFFRFAGILVFLCVVGTCGGCASTQETSTLQQSMTILYDRQEKMERRLEGFDAQSHKGGD 63
Query: 76 --AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
A Q + + + +A AAS ++ + P
Sbjct: 64 LYARIEELQVRVGRLNGRIEELEHKIEQLSRAAASPPATAASPPPDHGSAPPPVAVSPPP 123
Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
+ + + +Y + +
Sbjct: 124 PPAPAPPPPVTPPPERENPEKIQYEKATRAYQSGKYEVARKEFQSFLSKYPKSELADNAL 183
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+G Y Y AI +Q VL Y A+ + A+ L AR + +
Sbjct: 184 FTVGECYFSEKRYQDAIEVYQQVLDQYPRGNKVPNALLKQGTAFQQLGDSTAARILYERL 243
Query: 254 QERYPQGYWARYVETLVK 271
E+YP A+ E +K
Sbjct: 244 VEKYPGTPQAQAAEKKLK 261
>gi|218885504|ref|YP_002434825.1| lipoprotein [Desulfovibrio vulgaris str. 'Miyazaki F']
gi|218756458|gb|ACL07357.1| putative lipoprotein [Desulfovibrio vulgaris str. 'Miyazaki F']
Length = 246
Score = 56.3 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 43/178 (24%), Positives = 80/178 (44%)
Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
Y +E++E ++E+ + +A E F++ FPF+ ++ L A
Sbjct: 27 IDYFYLPPPEETAQELFEAGNDSMREKRYGEAAESFSKLKEQFPFSPYTIEAELSLADAH 86
Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
+ Y A +E+ T +P + + YV Y VG S + + +QY R
Sbjct: 87 FLDEDYLLAGEAYKEFETLHPRHEAIPYVLYQVGQSRQKAFLSIDRPTTGLTEAIQYYQR 146
Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
+ E Y + Y + A+ ++T R LA +E+ IG ++ + Y AA R+ V+ N+ +
Sbjct: 147 LRESYPGTEYAEKAKQHITECRRLLAERELYIGDFFWRAERYGAAWRRYVYVVENFPE 204
>gi|332704838|ref|ZP_08424926.1| tetratricopeptide domain-containing protein [Desulfovibrio
africanus str. Walvis Bay]
gi|332554987|gb|EGJ52031.1| tetratricopeptide domain-containing protein [Desulfovibrio
africanus str. Walvis Bay]
Length = 1057
Score = 56.3 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 34/212 (16%), Positives = 68/212 (32%), Gaps = 15/212 (7%)
Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106
+ + E+Y+ AV + +A E + Q R P + ++ Q S
Sbjct: 392 VDEKGKPILTHEELYQVAVRHFINSEYKEAIEVYKQL-RANPEVKGNMREEVLHNLAQAS 450
Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
Y+ + E+ + Y +
Sbjct: 451 YNLYRDTLRDHFHEVVGALEAAINFKPDSEKVPQALLQLGLAHLRVDNIPEASAYFKILT 510
Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
++Y V F G YY ++G+Y A +Q+V+ ++ D+
Sbjct: 511 DKYPQDLNVPYIDF--------------YWGDYYYRKGKYREAADAYQVVVQDHPDSPII 556
Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYP 258
+A L + L ++A ++V I +R+P
Sbjct: 557 RDASLGLARSLEKLEYYEQAYQIVDFIDKRWP 588
Score = 49.4 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 31/212 (14%), Positives = 68/212 (32%), Gaps = 21/212 (9%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
+ + + + + L+ N +A YF + +P Y GK
Sbjct: 476 KPDSEKVPQALLQLGLAHLRVDNIPEASAYFKILTDKYPQDLNVPYIDFYWGDYYYRKGK 535
Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
Y++AA + + D+ + + + + Q + I +R+
Sbjct: 536 YREAADAYQVVVQ--------DHPDSPIIRDASLGLARSLEKLEYYEQAYQIVDFIDKRW 587
Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
Y++ F E+ K GE + + + A +
Sbjct: 588 P-RFYIEDPEFLRL---------SGELANRLQKFGEAKDDLWNYYNMQ---PAATGNDVI 634
Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGY 261
+AR+ + Y+ + AR++ + RYP+
Sbjct: 635 LARIGDIYLRAGQRNAARDIYRTVAARYPEDE 666
Score = 44.0 bits (101), Expect = 0.023, Method: Composition-based stats.
Identities = 14/98 (14%), Positives = 34/98 (34%)
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
+E Y + + A+ R + + + +
Sbjct: 418 YKEAIEVYKQLRANPEVKGNMREEVLHNLAQASYNLYRDTLRDHFHEVVGALEAAINFKP 477
Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
D+E +A+ +L A++ + + EA ++ ++YPQ
Sbjct: 478 DSEKVPQALLQLGLAHLRVDNIPEASAYFKILTDKYPQ 515
>gi|256828931|ref|YP_003157659.1| outer membrane assembly lipoprotein YfiO [Desulfomicrobium
baculatum DSM 4028]
gi|256578107|gb|ACU89243.1| outer membrane assembly lipoprotein YfiO [Desulfomicrobium
baculatum DSM 4028]
Length = 237
Score = 56.3 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 44/197 (22%), Positives = 88/197 (44%), Gaps = 4/197 (2%)
Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85
+ V L G Y +E++E A F++++ +++A + + +
Sbjct: 5 LILFSFVLLLNGCGA----IDYYFLTPPDDTAQELFENARGFMQDKEYAEAADSLTKLND 60
Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
+PF+ A ++ LM A KY +A EE++ +P +++DYV + +G++
Sbjct: 61 RYPFSPYATEARLMLADAYALDSKYLEAVDAYEEFLNMHPRHESIDYVLFQIGVNKYNSH 120
Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
R + ++ R+V Y S Y + A Y+ R +A E+ + +Y K G
Sbjct: 121 RSIDLPHTQLGEAVESFRRLVSGYPKSIYREQALDYIVKCRKLMAEHEMFVADFYFKSGS 180
Query: 206 YVAAIPRFQLVLANYSD 222
Y AA R+ ++ N+ +
Sbjct: 181 YNAAWTRYVYIIDNFPE 197
>gi|325288190|ref|YP_004263980.1| outer membrane assembly lipoprotein YfiO [Cellulophaga lytica DSM
7489]
gi|324323644|gb|ADY31109.1| outer membrane assembly lipoprotein YfiO [Cellulophaga lytica DSM
7489]
Length = 270
Score = 56.3 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 46/240 (19%), Positives = 84/240 (35%), Gaps = 16/240 (6%)
Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
V + + YE A F E +F +A Q + + + + A Y
Sbjct: 18 SEYQKVLKNQDVKAKYEMAEKFYDEGDFKRANRLLEQIASKYIGKPQGERVMFFFANSYY 77
Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
G+Y A E ++ YP S+ + +L SY+ + R DQ T L +
Sbjct: 78 QIGQYNDAGYQFERFVKAYPRSEKMQEASFLGAKSYSYLSRKYSLDQTDTDKALLKIQNF 137
Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR------FQLVLAN 219
+ Y +S Y+ A + K +EI + + K GE+ + + +
Sbjct: 138 INTYPDSEYLPEANEIAASLTRKKEKKALEIAKQFTKLGEFYDLEYSISAIKALENFMLD 197
Query: 220 YSDAEHAEEAMARLVEAYVALALM----------DEAREVVSLIQERYPQGYWARYVETL 269
+ EEA+ A LA+ A E + + +P+ +A+ +
Sbjct: 198 NPGTIYKEEALYYKTLAAYNLAINSHPNKKEERLKNANEAYGKLIKTFPETEFAKKANNM 257
>gi|71891967|ref|YP_277697.1| putative lipoprotein [Candidatus Blochmannia pennsylvanicus str.
BPEN]
gi|71796073|gb|AAZ40824.1| putative lipoprotein [Candidatus Blochmannia pennsylvanicus str.
BPEN]
Length = 247
Score = 56.0 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 40/211 (18%), Positives = 86/211 (40%), Gaps = 12/211 (5%)
Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
+Y+ A L ++ +A + + ++ L + Y + A +
Sbjct: 34 YNLYKSAQNKLYNADYKEATQDLINLLNLYLLDPCPQQIYLDLIYAYYKLNDLKSANNYI 93
Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMI------------RDVPYDQRATKLMLQYMSRI 165
E + YP K+ DYV Y+ G+ + + + R+
Sbjct: 94 EHFFKLYPNHKHFDYVLYMHGVINMCLDEDNKKLIKYLNINWFDRNPMYACIAFHTFVRL 153
Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
+ +Y +S Y A + +N++A E+ I ++Y K+ Y++ I R + +L ++ D +
Sbjct: 154 IRQYPDSQYSLDAYKRLIFLKNRVAEYELSIVKFYSKKHAYISVIARVEKMLYHFPDTQA 213
Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQER 256
+A+ + +AY + L D+A +V +I
Sbjct: 214 TRKALYYMQQAYQNIYLPDQANKVAKIIAAN 244
>gi|228469797|ref|ZP_04054755.1| putative lipoprotein protein [Porphyromonas uenonis 60-3]
gi|228308636|gb|EEK17387.1| putative lipoprotein protein [Porphyromonas uenonis 60-3]
Length = 271
Score = 55.6 bits (131), Expect = 7e-06, Method: Composition-based stats.
Identities = 45/266 (16%), Positives = 88/266 (33%), Gaps = 20/266 (7%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + L ++ L + + + D Y A + E +S+ E
Sbjct: 1 MTRQTLLRILVLSCWLL--CTSSCAEYMRIQKSKD---PTLRYSYAKKYYNEGKYSRVAE 55
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+ ++L + A + AA ++YP+ Y G
Sbjct: 56 LMVDVLPHYEGTQEGAQALYIMADALLQNKQESSAAEYFRRLYSKYPQDARAAEARYKTG 115
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
++ ++ D DQ T L+ + +E Y S + K + ++ LA KE+
Sbjct: 116 LALYRIAPDPRLDQSITYSALKELQGFLEAYPQSEHRKEVEQMLFDLQDNLAKKELITAD 175
Query: 199 YYLK-----RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV----------ALALM 243
Y Y++AI + L Y +H E+ + +VEA +
Sbjct: 176 LYYNLGTYIGNNYISAIITARNALKAYPYTKHREDLLFIIVEASYQQAINSVESKKQGRL 235
Query: 244 DEAREVVSLIQERYPQGYWARYVETL 269
E + + +P G + +TL
Sbjct: 236 REVIDAYYNYENAFPNGKHLKRAKTL 261
>gi|289806131|ref|ZP_06536760.1| outer membrane protein assembly complex subunit YfiO [Salmonella
enterica subsp. enterica serovar Typhi str. AG3]
Length = 138
Score = 55.6 bits (131), Expect = 8e-06, Method: Composition-based stats.
Identities = 29/108 (26%), Positives = 50/108 (46%)
Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
D + + S++V Y NS Y A + +++LA E + YY RG +VA
Sbjct: 27 DRDPQHARAAFNDFSKLVRSYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTARGAWVA 86
Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
+ R + +L NY D + +A+ + AY + L +A +V +I
Sbjct: 87 VVNRVEGMLRNYPDTQATRDALPLMENAYRQMQLNAQADKVAKIIAAN 134
>gi|300113468|ref|YP_003760043.1| type IV pilus biogenesis/stability protein PilW [Nitrosococcus
watsonii C-113]
gi|299539405|gb|ADJ27722.1| type IV pilus biogenesis/stability protein PilW [Nitrosococcus
watsonii C-113]
Length = 257
Score = 55.6 bits (131), Expect = 8e-06, Method: Composition-based stats.
Identities = 26/257 (10%), Positives = 71/257 (27%), Gaps = 9/257 (3%)
Query: 20 YKFALTIFFSIAVCFLVGWER-QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
K + F+I + L G SS++ S+ + + + V + K+ +A +
Sbjct: 1 MKLGMIGVFTITLLALAGCASIFSSQEQVTPSIDKEKAAKINVQLGVEYFKQGELEQALK 60
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE-----EYITQYPESKNVDYV 133
+ + P A ++ + + ++ Q +
Sbjct: 61 KLERAIQQDPDIPSAYNAMALLKQRLGQTEEAEKYFQRAIKLDPAYSEAQNNYGVFLYNQ 120
Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
+ + +L + ++ + +L
Sbjct: 121 GHYGDAEARFLEAVKNPLYGTPELAYENAGMAAQKLAEFDKAERYYRKALQLEPRLPKSL 180
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+ ++G Y A Q A H +++ ++ L D L+
Sbjct: 181 YHMAEINFEKGHYQRAQEYLQRYRV---GARHTPKSLWLGIKIERELGNEDAVSSYALLL 237
Query: 254 QERYPQGYWARYVETLV 270
+ +P + ++ +
Sbjct: 238 RRNFPDSPETKLLQKSL 254
>gi|218780247|ref|YP_002431565.1| outer membrane assembly lipoprotein YfiO [Desulfatibacillum
alkenivorans AK-01]
gi|218761631|gb|ACL04097.1| outer membrane assembly lipoprotein YfiO [Desulfatibacillum
alkenivorans AK-01]
Length = 266
Score = 55.6 bits (131), Expect = 8e-06, Method: Composition-based stats.
Identities = 43/187 (22%), Positives = 84/187 (44%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
+ + E+ + + ++ ++++A E F + +PF+ A + L A +
Sbjct: 22 KDSKEKPAEELAADGIRYYEKGDYTQAIESFEKLKDWYPFSKYAILAELKLADSYFKRKN 81
Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
Y+ A E + + +P + + YV + +GM Y + DQ AT+ L+ R+ Y
Sbjct: 82 YEDAIYAYEYFESLHPRNDAIPYVIFQIGMCYFEQKALPDRDQTATESALENFLRLTREY 141
Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
S A ++ + + LA ++ +G YY K E+ AA RF+ +LA Y D +A
Sbjct: 142 PASAEAAMALEHIKICQETLARHDLFVGAYYFKAKEFHAARVRFRDILAAYPDVGVHRQA 201
Query: 230 MARLVEA 236
+ +
Sbjct: 202 LEYVALC 208
>gi|327402044|ref|YP_004342882.1| outer membrane assembly lipoprotein YfiO [Fluviicola taffensis DSM
16823]
gi|327317552|gb|AEA42044.1| outer membrane assembly lipoprotein YfiO [Fluviicola taffensis DSM
16823]
Length = 262
Score = 55.2 bits (130), Expect = 8e-06, Method: Composition-based stats.
Identities = 43/224 (19%), Positives = 81/224 (36%), Gaps = 10/224 (4%)
Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
+++A E + + + Q + P S Y+ + A+
Sbjct: 29 EAKFKEANKLYDEGKYERCVALYEQVYQRSPRTPQGEVSFYRLGKACYNVEDWYLASYYL 88
Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
+ ++P S V+ +L + + + DQ T + L + V R+ NS +
Sbjct: 89 SAFQAKFPYSPKVEETMFLAALCAVENSPEASLDQHETDVALNELQSFVSRFPNSERLDT 148
Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
F + R +L K+ + Y K Y AA+ Q L NY + + E+ A L+
Sbjct: 149 CNFVMDKLRLKLEHKDFMNVKLYSKTENYRAAVVSSQQFLDNYPRSLNREDCWAILIRNS 208
Query: 238 VALALM----------DEAREVVSLIQERYPQGYWARYVETLVK 271
LA+ D+ E ++ +P + R E V+
Sbjct: 209 YHLAINSIDAKLEERIDQTIERFNIFLVEFPNSNYLREFEGYVE 252
>gi|39995134|ref|NP_951085.1| TPR domain protein [Geobacter sulfurreducens PCA]
gi|39981896|gb|AAR33358.1| TPR domain protein [Geobacter sulfurreducens PCA]
gi|307634644|gb|ADI82887.2| TPR domain lipoprotein [Geobacter sulfurreducens KN400]
Length = 278
Score = 55.2 bits (130), Expect = 8e-06, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 33/93 (35%)
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
A G Y ++ AI FQ V+ NY E AM + A+
Sbjct: 183 FLEQHPKHELAANARYWTGETYYSEKKFEQAILEFQEVIKNYPGKEKVPAAMLKQAAAFS 242
Query: 239 ALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+ AR V+ + + YP A+ + +K
Sbjct: 243 EIGDAKSARFVLRKLADDYPSSEEAKRAKDRLK 275
Score = 45.9 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 21/119 (17%), Positives = 43/119 (36%)
Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99
++ + T+ +Y+K + + N+ A E F + P +A +
Sbjct: 140 KKVAEQAPSPKETEKPTPEALYQKGLDAYRAGNYGVARESFTRFLEQHPKHELAANARYW 199
Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
+ YS K++QA +E I YP + V +++++ KL
Sbjct: 200 TGETYYSEKKFEQAILEFQEVIKNYPGKEKVPAAMLKQAAAFSEIGDAKSARFVLRKLA 258
Score = 35.9 bits (80), Expect = 5.8, Method: Composition-based stats.
Identities = 13/61 (21%), Positives = 20/61 (32%)
Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
+ G Y A F L + E A A E Y + ++A + + YP
Sbjct: 168 YRAGNYGVARESFTRFLEQHPKHELAANARYWTGETYYSEKKFEQAILEFQEVIKNYPGK 227
Query: 261 Y 261
Sbjct: 228 E 228
>gi|213622690|ref|ZP_03375473.1| outer membrane protein assembly complex subunit YfiO [Salmonella
enterica subsp. enterica serovar Typhi str. E98-2068]
Length = 116
Score = 55.2 bits (130), Expect = 9e-06, Method: Composition-based stats.
Identities = 29/108 (26%), Positives = 50/108 (46%)
Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
D + + S++V Y NS Y A + +++LA E + YY RG +VA
Sbjct: 5 DRDPQHARAAFNDFSKLVRSYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTARGAWVA 64
Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
+ R + +L NY D + +A+ + AY + L +A +V +I
Sbjct: 65 VVNRVEGMLRNYPDTQATRDALPLMENAYRQMQLNAQADKVAKIIAAN 112
>gi|242280186|ref|YP_002992315.1| tol-pal system protein YbgF [Desulfovibrio salexigens DSM 2638]
gi|242123080|gb|ACS80776.1| tol-pal system protein YbgF [Desulfovibrio salexigens DSM 2638]
Length = 283
Score = 55.2 bits (130), Expect = 9e-06, Method: Composition-based stats.
Identities = 30/279 (10%), Positives = 68/279 (24%), Gaps = 27/279 (9%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV---------YEKAVLF--- 67
++ + + + G + + + + +++ +
Sbjct: 1 MQYLRILLIVVLAFVVSGCFAAKQPEEPVKPAWGGSEEWRLKSLEENFLHFKEGLRQQND 60
Query: 68 LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127
L E N + L + + Q+ + +
Sbjct: 61 LIESNHKDTTAQIEKLQERMTEMDSTLAELKENQQKMMTMKVEQEIPAEEAVVTEEVVMG 120
Query: 128 KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY----------MSRIVERYTNSPYVKG 177
N + + Q V N VK
Sbjct: 121 GNSSSEEKPWMVVPGEASAAAGAAQVDPAKAAPKPVSSLSGDALYQEGVRLVMNDNPVKA 180
Query: 178 ARFYVTVGRNQLAAKE-----VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232
++K IG Y + +I +F+ V + A +AM +
Sbjct: 181 RGLLEQYLAQNPSSKLAPNALYWIGETYYSEKSFAQSILKFKEVSRRFPKATKVPDAMLK 240
Query: 233 LVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+ AY L + A + + E YP+ A+ ++
Sbjct: 241 IGLAYDKLGDRENAVFYLRTLIEDYPKSAPAKIGRERLR 279
>gi|118581443|ref|YP_902693.1| TPR domain-containing protein [Pelobacter propionicus DSM 2379]
gi|118504153|gb|ABL00636.1| TPR domain protein [Pelobacter propionicus DSM 2379]
Length = 272
Score = 55.2 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 39/269 (14%), Positives = 72/269 (26%), Gaps = 17/269 (6%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFL--KEQNFSKAY 77
K I L G Q S D + + V+ + EK + + + ++ A
Sbjct: 1 MKTKSAIILLSLCITLTGCATQGSLDTTRNDINAVKTRLFSVEKDMDGIRGESKDRLDAL 60
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
E + A + + + Q ++ D +
Sbjct: 61 EREMKSEMASVRKIAADVQASGETTRNEMLALNGKLDDMSKPADEQSRYREDTDKRIISL 120
Query: 138 GMSYAQMIRDVP------YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
++ V + K I + + +A
Sbjct: 121 EERIVKLQATVDGLVGKGAESEKFKDATPPADAIYLKGLEAFKAGNMPAARDFFATFIAE 180
Query: 192 K---------EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242
Y AAI FQ V+ N+ AM + A+ A+
Sbjct: 181 HPKHELVGNARYWTAEALYAEKNYEAAIVSFQDVIKNHPKLSKIPAAMLKQGRAFKAIKD 240
Query: 243 MDEAREVVSLIQERYPQGYWARYVETLVK 271
+ AR V+ + YP+ A+ L+K
Sbjct: 241 PNSARYVLKKLIATYPKSEEAKRAGELLK 269
>gi|332291070|ref|YP_004429679.1| outer membrane assembly lipoprotein YfiO [Krokinobacter diaphorus
4H-3-7-5]
gi|332169156|gb|AEE18411.1| outer membrane assembly lipoprotein YfiO [Krokinobacter diaphorus
4H-3-7-5]
Length = 270
Score = 55.2 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 47/248 (18%), Positives = 85/248 (34%), Gaps = 21/248 (8%)
Query: 35 LVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR 94
L D + +Y + + KA + Q + A
Sbjct: 14 LSSCSTYQDVLKNDDIKAKYEFADSLYSQ-------GKYKKALRLWEQIVPLYRGRPQAE 66
Query: 95 KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
+ + A Y G Y E ++ +P+S + + SY + DQ
Sbjct: 67 RVTYLYANTFYELGDYYSGGYQFERFVKSFPQSTKREEAAFKSAESYYRRSPRFNLDQGD 126
Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK----RGEYVAAI 210
T + L+ + + Y +S V A V +L K EI + Y K RG + AI
Sbjct: 127 TYIALEKLQGFINEYPDSEQVDDANAKVQELNTKLERKSYEIAKGYNKIGASRGTFPNAI 186
Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALAL----------MDEAREVVSLIQERYPQG 260
F L + + + E+A+ + LA+ ++ A+ + +++ YPQG
Sbjct: 187 SAFDNFLLDNPGSIYREDALYWKFNSAYQLAMGSVKRLQVERLEAAKAAYNALEKYYPQG 246
Query: 261 YWARYVET 268
+A
Sbjct: 247 KYADEAAK 254
>gi|238920736|ref|YP_002934251.1| tol-pal system protein YbgF, [Edwardsiella ictaluri 93-146]
gi|238870305|gb|ACR70016.1| tol-pal system protein YbgF, putative [Edwardsiella ictaluri
93-146]
Length = 252
Score = 55.2 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/201 (13%), Positives = 59/201 (29%), Gaps = 14/201 (6%)
Query: 70 EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129
+ NQ SL + Q ++ A S + P +
Sbjct: 65 RGQIQENQYQLNQIEERQKQIYQQMDSLSSGSAPQGASASSSAATSDPQVAEANPPAAAQ 124
Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
D+ ++ + +++Y +S Y A +++
Sbjct: 125 QAAASGGDANVDYNRAVDLVLVKKQNDQAISAFQTFIKQYPDSTYQPNANYWLGQLFYSK 184
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
K+ A + +V+ NY + A E+M ++ D+A V
Sbjct: 185 GKKD--------------DAAYYYAVVVKNYPKSPKAAESMYKVGVIMQEKGQADKANAV 230
Query: 250 VSLIQERYPQGYWARYVETLV 270
+ ++YP A+ + +
Sbjct: 231 YQQVIKQYPNSDAAKLAQKRM 251
>gi|229495750|ref|ZP_04389478.1| putative lipoprotein protein [Porphyromonas endodontalis ATCC
35406]
gi|229317324|gb|EEN83229.1| putative lipoprotein protein [Porphyromonas endodontalis ATCC
35406]
Length = 276
Score = 55.2 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 46/269 (17%), Positives = 95/269 (35%), Gaps = 22/269 (8%)
Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
++ K +T F + + + D+ Y+ A + ++ +SKA
Sbjct: 5 KIVKLLVTGFLMLFSLLISSCGEMARIQKSNDTSLK-------YDYAKKYFNQKKWSKAS 57
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
E + ++L M + + AA Y T YP+ + +
Sbjct: 58 ELLVDVVPAYEGTSEGAQALYMLGISELALEHGDIAAESFRRYYTNYPKGAKAEESRFRA 117
Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
G ++ + DQ T +Q + +E Y S Y K A + +++LA KE++
Sbjct: 118 GEAFYISSPEAQLDQNVTYTAIQELQTFIELYPTSDYRKDAERMLFDLQDKLAYKELKSA 177
Query: 198 RYYLKR-----GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM----DEARE 248
Y Y +A+ L +Y ++ E+ ++ A A+ +
Sbjct: 178 TLYYDMGMYLGNNYQSAVVTANNALKDYPYSKWREDFYILILRATYQEAINSVVSKQQER 237
Query: 249 VVSLIQE------RYPQGYWARYVETLVK 271
++I +PQG + + + + K
Sbjct: 238 YRNVIDRYFAYVNEFPQGKYTKEADRIYK 266
>gi|193213682|ref|YP_001999635.1| TPR repeat-containing protein [Chlorobaculum parvum NCIB 8327]
gi|193087159|gb|ACF12435.1| Tetratricopeptide TPR_2 repeat protein [Chlorobaculum parvum NCIB
8327]
Length = 309
Score = 55.2 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 40/253 (15%), Positives = 73/253 (28%), Gaps = 10/253 (3%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
+ L C + SS + + V+ V Y++A + + + KA
Sbjct: 6 KRKPLRKILPGLFCIAISLSACSSSKLPAEQVSTVSQAESQYQRATELIDRKKYDKAIVV 65
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
+ L A Y +Y AA + + Q P+S + +
Sbjct: 66 LESLLFSTRATNLEDDVLHSLANSYYQKKQYLLAADMYRRLLQQTPDSPFAKSAQFELAK 125
Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
SY Q+ DQ T + S ++ Y + + + +V
Sbjct: 126 SYEQLSPFYELDQEYTVKAINEFSTYLDEYP----LDDSAQAQSDAELYKELLKVNPTNA 181
Query: 200 YLKRGEYVAAIPRFQLVLANYSDA------EHAEEAMARLVEAYVALALMDEAREVVSLI 253
K A A+YS + + + YV L A ++
Sbjct: 182 SYKAKYDEAMAQLSNGAPASYSKSAILKLRDKLAHNRYSIALQYVRLKKYRAADIYFDVV 241
Query: 254 QERYPQGYWARYV 266
+YP W +
Sbjct: 242 INQYPDTKWVKSA 254
>gi|85860041|ref|YP_462243.1| ComL family lipoprotein [Syntrophus aciditrophicus SB]
gi|85723132|gb|ABC78075.1| lipoprotein, ComL family [Syntrophus aciditrophicus SB]
Length = 239
Score = 54.8 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 42/234 (17%), Positives = 95/234 (40%)
Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
Y+ + + + + S +Y + + + KA
Sbjct: 1 MKYRTLCVRSLIVFCAASLLLSLLTGCAWFRKSDMTRATPEGLYRRGYEDYQNGRYKKAI 60
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
E F + ++P + +A + + YS Y +A + +++ +P ++N+ YV Y +
Sbjct: 61 ESFERLRDEYPMSELAILAKVGIGDAHYSNKAYAEAEAAYNDFVYLHPTNENLPYVMYQI 120
Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
GM + + + + DQ T + +++ R+ +S + A + R ++A E +G
Sbjct: 121 GMCHYKQMLSIDRDQTETVRAAKEFEKLLARFPDSKFSLMAEKMLRECRVRIAEHEFYVG 180
Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
+Y K+ +Y AA+ RF+ + Y++ + A + E +A +E
Sbjct: 181 EFYFKQKKYQAALKRFETINREYANLGLDYKVSAYIRETQKRIAQEKARKEARE 234
>gi|319760322|ref|YP_004124260.1| putative lipoprotein [Candidatus Blochmannia vafer str. BVAF]
gi|318039036|gb|ADV33586.1| putative lipoprotein [Candidatus Blochmannia vafer str. BVAF]
Length = 261
Score = 54.8 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 45/248 (18%), Positives = 106/248 (42%), Gaps = 13/248 (5%)
Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
+ + ++ ++ S + ++Y+ A L N++++ +
Sbjct: 13 KFIKPYILLSSILIINIFSTSFLMAKSHHKIKHQNSSDLYKSAHDKLLHNNYTESIQKLL 72
Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
+ + PF ++ L + Y +Q A + + +++ YP KN+DYV Y+ G+
Sbjct: 73 RLNNLHPFEPYPQQIYLDLIYAYYKLHDFQSANNFIQRFLSSYPNHKNLDYVLYMQGLIN 132
Query: 142 AQMIR-------------DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
+ + ++ + S+I++ + NS Y A + + +N+
Sbjct: 133 MNLDKNNSYFAHKYWHKSWFKHNPSYANIAFHSFSKIIQNHPNSQYYIDAYKRLIILKNR 192
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
+A E+ I ++Y +R Y++ I R + +L + + EA+ + AY ++L+D++
Sbjct: 193 IANYELAIIKFYDQRNSYISVILRSERMLRYFPNTPATYEALYYMKRAYQKVSLLDQSNI 252
Query: 249 VVSLIQER 256
V +I E
Sbjct: 253 VNKIISEN 260
>gi|256425917|ref|YP_003126570.1| outer membrane assembly lipoprotein YfiO [Chitinophaga pinensis DSM
2588]
gi|256040825|gb|ACU64369.1| outer membrane assembly lipoprotein YfiO [Chitinophaga pinensis DSM
2588]
Length = 302
Score = 54.8 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 41/225 (18%), Positives = 76/225 (33%), Gaps = 6/225 (2%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K L I +A V ++ + + Y A ++ + A
Sbjct: 1 MRKLVLYICLFVAATAAVSCNT----ELRRIEKSKDYEAKLAY--ADKLYAKKKYMTAQT 54
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+ + + + Y Y QA + Y+ +P S + Y+
Sbjct: 55 LYESLFQVYKGTDKYEPMYYNYCYCSYKMKDYVQAGFYFKNYLDNFPNSPRATEMDYMQA 114
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
Y + V DQ T+ + M + Y S V A + + R +L KE
Sbjct: 115 YCYYKQSPKVALDQTNTQKAIAAMQTFINNYPTSDKVPEANLVIELSRRKLEKKEYNNAE 174
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243
Y G Y AA F+ ++ N+ D++ ++ ++AY A
Sbjct: 175 LYYNLGHYQAAAITFKSLMRNFPDSDKSDSYKYMAIKAYYNYAKN 219
>gi|323697458|ref|ZP_08109370.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfovibrio
sp. ND132]
gi|323457390|gb|EGB13255.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfovibrio
desulfuricans ND132]
Length = 1110
Score = 54.8 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/255 (11%), Positives = 71/255 (27%), Gaps = 29/255 (11%)
Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
+ + D Y + ++ ++ KA + F Q + +P +A+++ A
Sbjct: 564 KILQDKYPDDDNIPSISYYWGEYWYRKGDYKKAADQFQQLIQTYPEHQLAKQAAYYLADS 623
Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT-------- 155
G QA + + ++P+ + + + ++ +
Sbjct: 624 LDRLGYLDQAYQIVDYIDKRWPDYYMENMEFLRLAGGVEMQLKKWDPAKNHYFTYYNLNP 683
Query: 156 ------------------KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
K ++ E+ K + + +
Sbjct: 684 EADGADVVLARIGDIYLRKNQKDAAKQVYEKAVKDFPDKEGGLIAKMRLAEEGIYDDPAM 743
Query: 198 RYY---LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
R + + +++ + D+ A A +L + EA +
Sbjct: 744 NEMVDVFNRPYNLNPKRVYTEIVSQHPDSPLAPIAQLKLAMWHAFHKQYPEALTAAQDLI 803
Query: 255 ERYPQGYWARYVETL 269
E+YP A TL
Sbjct: 804 EKYPDSPLADKARTL 818
Score = 49.8 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 30/221 (13%), Positives = 71/221 (32%), Gaps = 21/221 (9%)
Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
+ L+++ D +A + +A F + R+ L
Sbjct: 447 SPEEKEKARLEAINDKL------GEAQSLMFNGALDEALPLFEDILKQPKLPDDVREETL 500
Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
+ +E Y ++ N + + +
Sbjct: 501 YAVADIKKQLDANDLPGKFDEVAQAYIQAMN-ANLRSNRVPRALLNLGLLNLQVGNFPEA 559
Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
Y + ++Y + + + G Y+ ++G+Y A +FQ ++
Sbjct: 560 RAYFKILQDKYPDDDNIPSISY--------------YWGEYWYRKGDYKKAADQFQQLIQ 605
Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
Y + + A++A L ++ L +D+A ++V I +R+P
Sbjct: 606 TYPEHQLAKQAAYYLADSLDRLGYLDQAYQIVDYIDKRWPD 646
Score = 38.6 bits (87), Expect = 0.82, Method: Composition-based stats.
Identities = 9/62 (14%), Positives = 22/62 (35%)
Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
+ A F+++ Y D ++ E + +A + + + YP+ A+
Sbjct: 555 NFPEARAYFKILQDKYPDDDNIPSISYYWGEYWYRKGDYKKAADQFQQLIQTYPEHQLAK 614
Query: 265 YV 266
Sbjct: 615 QA 616
>gi|297569166|ref|YP_003690510.1| hypothetical protein [Desulfurivibrio alkaliphilus AHT2]
gi|296925081|gb|ADH85891.1| Tetratricopeptide TPR_4 [Desulfurivibrio alkaliphilus AHT2]
Length = 703
Score = 54.8 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/111 (18%), Positives = 39/111 (35%), Gaps = 8/111 (7%)
Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
++ + R+ + SP+ + A + R ++A ++
Sbjct: 71 EREDWRRAAIDFERLHREHPTSPFAEEALWRAATLRKKIA--------ATEPDPDWERIR 122
Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
F+ Y D+ AEEA + A+ + + EA L ERYP
Sbjct: 123 DLFRRFTVEYPDSPQAEEAYLEMGIAHFKMRFLREALTYFRLFVERYPDSE 173
Score = 42.5 bits (97), Expect = 0.066, Method: Composition-based stats.
Identities = 28/208 (13%), Positives = 61/208 (29%), Gaps = 22/208 (10%)
Query: 50 SVTDVRYQREVY-EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
D E Y E + K + +A YF +P + + ++ A
Sbjct: 131 EYPDSPQAEEAYLEMGIAHFKMRFLREALTYFRLFVERYPDSELVPRARHWQARTLIEVA 190
Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
+ +A + +E + + ++ + L Q L +
Sbjct: 191 RVDEAIEIFKELTEEPELAFRLEVMTNLGLAYDQQGAYW---------EALATFQELQRV 241
Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
+++ F + +G+ Y + G + + D+ E
Sbjct: 242 APEEYHLQNPEFLLL------------LGQAYFRVGREQEGYQQVFSFINLAPDSPRRPE 289
Query: 229 AMARLVEAYVALALMDEAREVVSLIQER 256
A+ L E+ + AR + + I E
Sbjct: 290 ALFELGESRRRQGEHETARRLYNRILEE 317
Score = 37.9 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 13/80 (16%), Positives = 26/80 (32%), Gaps = 6/80 (7%)
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA------LMDEAR 247
+ +R ++ A F+ + + + AEEA+ R +A + R
Sbjct: 63 WQSAVGAAEREDWRRAAIDFERLHREHPTSPFAEEALWRAATLRKKIAATEPDPDWERIR 122
Query: 248 EVVSLIQERYPQGYWARYVE 267
++ YP A
Sbjct: 123 DLFRRFTVEYPDSPQAEEAY 142
>gi|71278988|ref|YP_270904.1| lysM domain-containing protein [Colwellia psychrerythraea 34H]
gi|71144728|gb|AAZ25201.1| lysM domain protein [Colwellia psychrerythraea 34H]
Length = 524
Score = 54.8 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/254 (11%), Positives = 74/254 (29%), Gaps = 17/254 (6%)
Query: 19 LYKFAL-TIFFSIAVCFLVGW---ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFS 74
+ K+ + T+ +I++ L G +++ + + + +LK + S
Sbjct: 1 MAKYLISTLLTAISMTLLSGCVTQSFENNEPIVKNQANRDEMAATRISLGLGYLKMGDMS 60
Query: 75 KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
+A + F+ + A + G+ A E+ ++ +S + Y
Sbjct: 61 QAK---LNLEKAKKFSPNLVQVHTAFAHYYETVGEGTLAIESFEQALSIKADSADTLNNY 117
Query: 135 YLVGMSY--------AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
+ + + ++ + N +
Sbjct: 118 GVFLCRQGNVAAAEVQFLKAIAVPSYLLVSESYENLASCYLQNDNFEKAEMYLNKSIYHS 177
Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
+ ++ R G Y A Q + +++ + Y L A
Sbjct: 178 PNRTSTLFQMVRLQYAMGNYKEAKRYLQKFERSTQR--FTANSLSLAYKLYWKLGQRRTA 235
Query: 247 REVVSLIQERYPQG 260
R +++ + YPQ
Sbjct: 236 RNYANMLVKMYPQS 249
>gi|291280327|ref|YP_003497162.1| hypothetical protein DEFDS_1955 [Deferribacter desulfuricans SSM1]
gi|290755029|dbj|BAI81406.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1]
Length = 252
Score = 54.4 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 45/257 (17%), Positives = 98/257 (38%), Gaps = 12/257 (4%)
Query: 15 WAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFS 74
Q+ K ++ ++ + G + +++ + + + + +
Sbjct: 1 MRLQMKKVLVSFIITLLLFACAG------------KKEINKDAATYFKEGLTYFQNKKYE 48
Query: 75 KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
KA F + + +A K+ L A Y KY A + + Y+ Y +
Sbjct: 49 KAAAAFEEALKKADTPELAAKAQLFLADSYYLDEKYDDAIAAYKSYLELYENQPDAKRAL 108
Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
+G+SY M++ + DQ T+ ++ +Y + +N LA K+
Sbjct: 109 LRLGLSYYAMLQPIDRDQSYTREAYNTFLKLNAKYPEFSKKYNIPAKLRKLKNMLAEKDF 168
Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
+ ++Y++ GE AAI R + +L Y D + EA + + + D+A V+S +
Sbjct: 169 YVAKFYVRIGEDKAAIVRLEKILKEYKDTKVYPEAALLYAKVLINIKKPDKAVSVLSQLL 228
Query: 255 ERYPQGYWARYVETLVK 271
+ + ++K
Sbjct: 229 KERKDPRLLPEINKILK 245
>gi|148264413|ref|YP_001231119.1| TPR repeat-containing protein [Geobacter uraniireducens Rf4]
gi|146397913|gb|ABQ26546.1| Tetratricopeptide TPR_2 repeat protein [Geobacter uraniireducens
Rf4]
Length = 860
Score = 54.4 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/261 (11%), Positives = 68/261 (26%), Gaps = 23/261 (8%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLD--------------------SVTDVRYQR 58
+YK I +I + + G ++ ++Y D Y
Sbjct: 1 MYK---VIIIAIVLFNIAGCSGKTKEELYAKGVKQINDGNPNGAIVFLKNALEKDQNYLD 57
Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
Y+ A ++ + +A + F + R P L A
Sbjct: 58 ARYQLAKAYVAAVKYEQAEKEFQKVLRQNPSRVEIMLDLARIYNSSKKPDLAIDAMGKYL 117
Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
+ Q E+ + + Y + + + +A + Y K A
Sbjct: 118 KSHQQSSEALEIMGIGYALKNRLDEAENYLLQALKADPRRSGAKLDLAGIYIACGREKDA 177
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
R + ++ + A+ + Y+
Sbjct: 178 RQRLDEIIKVDPKSSRAYYMLAGLENSVGNKDRALEIYQTILKINKFDTSAIYKSGLIYI 237
Query: 239 ALALMDEAREVVSLIQERYPQ 259
+D+A ++ + + + YP
Sbjct: 238 DKGELDKAEKLAAHLLQNYPN 258
>gi|213423524|ref|ZP_03356504.1| outer membrane protein assembly complex subunit YfiO [Salmonella
enterica subsp. enterica serovar Typhi str. E01-6750]
Length = 112
Score = 54.4 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/108 (26%), Positives = 50/108 (46%)
Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
D + + S++V Y NS Y A + +++LA E + YY RG +VA
Sbjct: 1 DRDPQHARAAFNDFSKLVRSYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTARGAWVA 60
Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
+ R + +L NY D + +A+ + AY + L +A +V +I
Sbjct: 61 VVNRVEGMLRNYPDTQATRDALPLMENAYRQMQLNAQADKVAKIIAAN 108
>gi|298506099|gb|ADI84822.1| TPR domain lipoprotein [Geobacter sulfurreducens KN400]
Length = 896
Score = 54.4 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/264 (8%), Positives = 63/264 (23%), Gaps = 24/264 (9%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLD--------------------SVTDVRYQR 58
+ + + + + L G +S ++Y + D +Q
Sbjct: 1 MSRSFIITGLVVLMFTLSGCGGKSRDELYTEGVKLLQEGNPGGAVVLFKSALEKDQNFQD 60
Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
Y+ A + + +A + + + + P + L + +
Sbjct: 61 ARYQLAKAYQALGKYEQAEKEYLKVLKQNP-SKTDIVLELAKLYNSQRKPDQAVEQAGKY 119
Query: 119 EYITQYPESKNVDYVYYLVGMSY---AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
A+ + ++ + + ++ S
Sbjct: 120 LQSNPGSAEALEVLGLGYALKGMPAEAERNFLLALEKEPRRTSAKLQLAVLLMEQKSSRE 179
Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
K AR + ++ + + R
Sbjct: 180 KEARALIDEILTADPGNVKAHNLLASYELSLGNREQALEIYRKVAALTPGDPAPLYRQGV 239
Query: 236 AYVALALMDEAREVVSLIQERYPQ 259
+ MD+A + + +++PQ
Sbjct: 240 ILLEKGEMDKAEKTAETLVQKFPQ 263
>gi|225013058|ref|ZP_03703473.1| DNA uptake lipoprotein-like protein [Flavobacteria bacterium
MS024-2A]
gi|225002786|gb|EEG40767.1| DNA uptake lipoprotein-like protein [Flavobacteria bacterium
MS024-2A]
Length = 275
Score = 54.4 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 45/236 (19%), Positives = 91/236 (38%), Gaps = 10/236 (4%)
Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
+ + E Y++A ++ + KA F Q + A++ + A +
Sbjct: 22 NEYQKLLNSDDASEKYKQAEVYYNSGEYRKANRLFEQIIPKYRGKAQAQRIIFFFADSYF 81
Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
Y AA E +I YP+S + + SY DQ T ++ +
Sbjct: 82 QTKSYYLAAYQYENFIKSYPQSDRIQEATFKAAKSYYFSSPKFSLDQEDTYTAIEKLQVF 141
Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
+ Y NS ++ A ++ + +L K+ EI + Y +Y +AI + +A++ ++
Sbjct: 142 INLYPNSEFIVEANQMISELQEKLEQKDFEIAKQYYTIRDYQSAIKSSENFIASFPGTKY 201
Query: 226 AEEAMARLVEAYV----------ALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
E A+ +A L + E ++ +I YP+ + +E +K
Sbjct: 202 RESALFNKFKASYEIAVNSVFSKKLDRLQELQQQYEVILRYYPETLFLSELEDKMK 257
>gi|317153857|ref|YP_004121905.1| tetratricopeptide domain-containing protein [Desulfovibrio
aespoeensis Aspo-2]
gi|316944108|gb|ADU63159.1| tetratricopeptide domain protein [Desulfovibrio aespoeensis Aspo-2]
Length = 1061
Score = 54.0 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/255 (12%), Positives = 70/255 (27%), Gaps = 29/255 (11%)
Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
+ + + D Y + K ++ KA + F + +P + +++ A
Sbjct: 515 KVLQDNYPDDDNIPSISYYWGEYYYKMGDYLKAADQFQYLIQTYPEHQLVKEAAYYLADS 574
Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVD----------YVYYLVGMSYAQMIRDVPYDQR 153
G +QA + + ++P+ + +
Sbjct: 575 LNRTGFVEQAYQIVDYIDKRWPDYYMENAEFLRLAGGVEMALDKLQEAKNHYFTYYNLNP 634
Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY------------- 200
++ ++RI + Y A+ KE +
Sbjct: 635 DSEGADVVLARIGDIYVRQGEKGAAKQIYERAVLDYPDKEGGLIARMRLAEEGIYDDPTM 694
Query: 201 ------LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
R + +Q ++ Y D+ A A +L + EA +
Sbjct: 695 GDMVSVFDRPYNLRPEMIYQEIVERYPDSPLAPIAQLKLAMWHAFNKQYPEALGAAQDLI 754
Query: 255 ERYPQGYWARYVETL 269
E+YP R TL
Sbjct: 755 EKYPDSPLVRTARTL 769
Score = 53.6 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 34/221 (15%), Positives = 68/221 (30%), Gaps = 17/221 (7%)
Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106
+ + +VY +A + +A F R R+ L +
Sbjct: 401 VVAKAKEQELADKVY-EAQSLMFNGKLDEALPLFEDILRMPEVPLHIREETLYAVADIKK 459
Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
A + + E+ N++ V + + Y +
Sbjct: 460 QKYGNDLAGNFRDISQAFIEAMNINLRSNRVPSALLNLGLLNLQVNNFP-EAKAYFKVL- 517
Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
Y G YY K G+Y+ A +FQ ++ Y + +
Sbjct: 518 ----QDNYPDDDNIPSI---------SYYWGEYYYKMGDYLKAADQFQYLIQTYPEHQLV 564
Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
+EA L ++ +++A ++V I +R+P Y+ E
Sbjct: 565 KEAAYYLADSLNRTGFVEQAYQIVDYIDKRWPD-YYMENAE 604
>gi|187735116|ref|YP_001877228.1| Tetratricopeptide TPR_2 repeat protein [Akkermansia muciniphila
ATCC BAA-835]
gi|187425168|gb|ACD04447.1| Tetratricopeptide TPR_2 repeat protein [Akkermansia muciniphila
ATCC BAA-835]
Length = 316
Score = 54.0 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/251 (13%), Positives = 75/251 (29%), Gaps = 15/251 (5%)
Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
+ K L + L ++ + D + + ++A + + S A
Sbjct: 2 NVKKLFLMMAAVSGALALCQCSSEAPPPPGTVRMVD-QQAIALMQEARAKEAKNDLSGAI 60
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
+ + + P + A + A + + + +A ++ I ++P+S
Sbjct: 61 KKYRRVVEKHPLSREAPLARFRMAELYEARKEPAEAFDQYQKLIDRHPDSPLYRQAMSRQ 120
Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
++ +M + TN +G
Sbjct: 121 KEMAFGAASGALTNRV------LWMFDVRMDPTNVTEWLKHVRDNAPYAPTAPQAMNVLG 174
Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA--------LMDEAREV 249
Y RG AI +Q ++ NY ++ A A ++ Y A + A+E
Sbjct: 175 NYLAARGRMKEAIEAYQNLVDNYPNSPLAPTAQLQIATLYRQAAADGDRNHVNVARAQEA 234
Query: 250 VSLIQERYPQG 260
+RYP
Sbjct: 235 YEDYLQRYPNS 245
Score = 44.0 bits (101), Expect = 0.023, Method: Composition-based stats.
Identities = 17/83 (20%), Positives = 33/83 (39%)
Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243
+Q A ++ R + + AI +++ V+ + + A A R+ E Y A
Sbjct: 34 RMVDQQAIALMQEARAKEAKNDLSGAIKKYRRVVEKHPLSREAPLARFRMAELYEARKEP 93
Query: 244 DEAREVVSLIQERYPQGYWARYV 266
EA + + +R+P R
Sbjct: 94 AEAFDQYQKLIDRHPDSPLYRQA 116
>gi|329964889|ref|ZP_08301897.1| outer membrane assembly lipoprotein YfiO [Bacteroides fluxus YIT
12057]
gi|328524530|gb|EGF51598.1| outer membrane assembly lipoprotein YfiO [Bacteroides fluxus YIT
12057]
Length = 267
Score = 54.0 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 45/266 (16%), Positives = 84/266 (31%), Gaps = 22/266 (8%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
+ +A L + D YE A + + +++A
Sbjct: 1 MKKNILITLLAAMLLSSCGEYNKLLKSTDYEYK-------YEAAKTYFAKGQYNRAATLL 53
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
N+ A +SL M Y+ YQ AA +Y YP + + G +
Sbjct: 54 NELIAILKGTDKAEESLYMLGMSYYNQKDYQTAAQTFIQYYNVYPRGTFTELARFHAGKA 113
Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV-----E 195
+ DQ T +Q + +E + S + A+ + +++L KE
Sbjct: 114 LYLDTPEPRLDQSGTYSAIQQLQMFMEYFPQSAKKEEAQNMIFALQDKLVMKEYLSAKLY 173
Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA----------LMDE 245
Y A + Q L +Y E+ ++ A LA E
Sbjct: 174 YNLGNYLGNNYQACVITAQNALKDYPYTNLREDLSILVLRAKYELAVYSVEEKKPERYRE 233
Query: 246 AREVVSLIQERYPQGYWARYVETLVK 271
A + + +P+ +++ E + K
Sbjct: 234 AVDEYYAFKNEFPESKYSKEAERIFK 259
>gi|149372318|ref|ZP_01891506.1| TPR repeat protein [unidentified eubacterium SCB49]
gi|149354708|gb|EDM43271.1| TPR repeat protein [unidentified eubacterium SCB49]
Length = 266
Score = 54.0 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 42/219 (19%), Positives = 79/219 (36%), Gaps = 7/219 (3%)
Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
+ V + Y A + K+ + Q
Sbjct: 4 IFLIVVLSITFASCSEYQK-------VLAGDSTAKKYAMADSLYTAGKYLKSVKLMEQII 56
Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
+ +K + + A Y+ G Y + E + YP+S +V + SY ++
Sbjct: 57 PAYRGKPQGQKLMFLYANAYYNLGDYTLSGYQFERFTISYPKSDSVVVAAFRGAKSYYEL 116
Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204
DQ T L+ + + Y ++ A V+ R++L K EI YL+
Sbjct: 117 SPVYSLDQADTNKALEKLQGFINNYPDADQRVEANEMVSDLRSKLDYKAFEIAEQYLRIS 176
Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243
+Y AAI + +AN+ +E+ ++A ++A LA+
Sbjct: 177 DYKAAISAYDNFIANHPGSEYRKDAFYGRLKASYELAIN 215
>gi|213023739|ref|ZP_03338186.1| outer membrane protein assembly complex subunit YfiO [Salmonella
enterica subsp. enterica serovar Typhi str. 404ty]
Length = 161
Score = 54.0 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/166 (16%), Positives = 55/166 (33%), Gaps = 17/166 (10%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + + + FL G E+Y A L++ N+ +A
Sbjct: 1 MTRMKYLVAAATLSLFLAGCSGSKEE-------VPDNPPNEIYATAQQKLQDGNWKQAIT 53
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+PF +++ L + Y A + + ++ P N+DYV Y+ G
Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFMRLNPTHPNIDYVMYMRG 113
Query: 139 MSYAQMI----------RDVPYDQRATKLMLQYMSRIVERYTNSPY 174
++ + D + + S++V Y NS Y
Sbjct: 114 LTNMALDDSVLQGFFGVDRSDRDPQHARAAFNDFSKLVRSYPNSQY 159
>gi|315223392|ref|ZP_07865249.1| outer membrane assembly lipoprotein YfiO [Capnocytophaga ochracea
F0287]
gi|314946565|gb|EFS98556.1| outer membrane assembly lipoprotein YfiO [Capnocytophaga ochracea
F0287]
Length = 268
Score = 54.0 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 50/261 (19%), Positives = 86/261 (32%), Gaps = 17/261 (6%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
I + + Y +A K + + KA
Sbjct: 1 MLIKKYIIIGLLTVLFTSCGEYQKALKSKEGSVK-------YTQAEKLYKAKKYKKATRL 53
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
F Q + ++ + M Y +Y A+ E YP S+ +L
Sbjct: 54 FEQIASEYAGKPQGERIYYMFGDSYYQLKQYSLASYQFERLQKLYPRSEKATESAFLEAK 113
Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
S DQ T L+ + ++RY++S Y K A +L KE EI +
Sbjct: 114 SLYLETPKYSVDQTYTYQALEKLQYFLDRYSDSEYAKEANELALDLVTRLEKKEFEIAKQ 173
Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA-RLVEAYV---------ALALMDEAREV 249
Y + +Y AA+ L N + E+A+ RL AY ++ A+E
Sbjct: 174 YDQIRDYQAAMKSLDNFLTNNPGSVFREDALYTRLHSAYEWAINSIETKKEERLNTAKEA 233
Query: 250 VSLIQERYPQGYWARYVETLV 270
+ YP+ + + E ++
Sbjct: 234 YDNLLRAYPETKYKKEAENML 254
>gi|239997031|ref|ZP_04717555.1| ATP-dependent protease La [Alteromonas macleodii ATCC 27126]
Length = 396
Score = 53.6 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/251 (12%), Positives = 73/251 (29%), Gaps = 8/251 (3%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
+ +L I F A+ F G S +Y + + + +L+ N+++A +
Sbjct: 5 LRTSLKIGFLSAIIFTSGCVSNSQSGLYGGNFDHEEAAKTRMSLGLTYLQNNNYTQAKKN 64
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
++ F + A+ G +A E I P + ++ Y
Sbjct: 65 LDKAL---EFNPRSADVQFAMAYYYQLVGDNLRAEEYYETAIDLAPNNGDIANSYGAFKC 121
Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV----E 195
+ + Y A L + + +G Q A K +
Sbjct: 122 QNGEYEKAKAYFFDAINNRLYANAAQTYENLALCAQSQGKLDEAIGYFQDALKHQPARGK 181
Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSD-AEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
+ + L Y A+ +++ E ++ A+ ++
Sbjct: 182 SLFLLSELYTVSEQWELAESTLRKYERVAKVTPDSLWLAYEIAKGKGDLETAKGYGEMMM 241
Query: 255 ERYPQGYWARY 265
+P+ +
Sbjct: 242 SLFPESELTKR 252
>gi|256820330|ref|YP_003141609.1| outer membrane assembly lipoprotein YfiO [Capnocytophaga ochracea
DSM 7271]
gi|256581913|gb|ACU93048.1| outer membrane assembly lipoprotein YfiO [Capnocytophaga ochracea
DSM 7271]
Length = 268
Score = 53.6 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 50/261 (19%), Positives = 86/261 (32%), Gaps = 17/261 (6%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
I + + Y +A K + + KA
Sbjct: 1 MLIKKYIIIGLLTVLFTSCGEYQKALKSKEGSVK-------YTEAEKLYKAKKYKKATRL 53
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
F Q + ++ + M Y +Y A+ E YP S+ +L
Sbjct: 54 FEQIASEYAGKPQGERIYYMFGDSYYQLKQYSLASYQFERLQKLYPRSEKATESAFLEAK 113
Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
S DQ T L+ + ++RY++S Y K A +L KE EI +
Sbjct: 114 SLYLETPKYSVDQTYTYQALEKLQYFLDRYSDSEYAKEANELALDLVTRLEKKEFEIAKQ 173
Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA-RLVEAYV---------ALALMDEAREV 249
Y + +Y AA+ L N + E+A+ RL AY ++ A+E
Sbjct: 174 YDQIRDYQAAMKSLDNFLTNNPGSAFREDALYTRLHSAYEWAINSIETKKEERLNTAKEA 233
Query: 250 VSLIQERYPQGYWARYVETLV 270
+ YP+ + + E ++
Sbjct: 234 YDNLLRAYPETKYKKEAENML 254
>gi|91202470|emb|CAJ72109.1| hypothetical protein kustd1364 [Candidatus Kuenenia
stuttgartiensis]
Length = 308
Score = 53.6 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 38/176 (21%), Positives = 77/176 (43%), Gaps = 1/176 (0%)
Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
+V++ + ++ + + A F + + P +A +S + A + G Y+ A
Sbjct: 124 EKVFQVGIAQMEM-DENAAIRVFEKIIENHPMGPIAPESQIKIADCYFKLGYYEDAVDAY 182
Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
++++ YP ++ + YV Y + +S + + + + + YV+
Sbjct: 183 KKFMESYPRNEWIPYVQYQIPLSKFYFEKQQERNYGLLVSAREGFEEYLVTNPHGVYVED 242
Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
A + R A +E EIG +YL+R +A F+ V+ ++ D AE AM RL
Sbjct: 243 ASRMIEEIRVIEARREFEIGEFYLRRKTPSSASIYFKYVIKDFPDTIWAERAMERL 298
Score = 44.0 bits (101), Expect = 0.023, Method: Composition-based stats.
Identities = 43/299 (14%), Positives = 82/299 (27%), Gaps = 45/299 (15%)
Query: 18 QLYKFALTIFFSIAVCFLVGWER------QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQ 71
+ +AV FL+ DV + Y+ A+ L EQ
Sbjct: 1 MKLRSGFFPIIVLAVTFLISTASYGKWVWNKDTGWMQPPTGDVGSPEQRYKNALFMLVEQ 60
Query: 72 NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
+ A + F +P + A S + + Y G Y +A + + +YP +K
Sbjct: 61 KYVSAIKEFKLIIDGYPDSAYAELSQINIGWAYYLNGDYNRALKAYDTVLREYPGTKRTK 120
Query: 132 YVYYLVGMSYAQMIRDVPY-----------DQRATKLMLQYMSRIVERYTNSPYVKG--- 177
V+ V + + + + +I + Y Y +
Sbjct: 121 EVHEKVFQVGIAQMEMDENAAIRVFEKIIENHPMGPIAPESQIKIADCYFKLGYYEDAVD 180
Query: 178 -----------ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
+ V +K + G V+A F+ L +
Sbjct: 181 AYKKFMESYPRNEWIPYVQYQIPLSKFYFEKQQERNYGLLVSAREGFEEYLVTNPHGVYV 240
Query: 227 EEAM--------------ARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
E+A + E Y+ A + + +P WA ++
Sbjct: 241 EDASRMIEEIRVIEARREFEIGEFYLRRKTPSSASIYFKYVIKDFPDTIWAERAMERLE 299
>gi|332519650|ref|ZP_08396114.1| outer membrane assembly lipoprotein YfiO [Lacinutrix algicola
5H-3-7-4]
gi|332044209|gb|EGI80403.1| outer membrane assembly lipoprotein YfiO [Lacinutrix algicola
5H-3-7-4]
Length = 267
Score = 53.6 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 49/217 (22%), Positives = 83/217 (38%), Gaps = 11/217 (5%)
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
Y V +E +SKA F + A K + ++A Y Y + E +
Sbjct: 33 YRMGVKKYEEGKYSKANRIFEMIIPQYRGKPQAEKLMFLNADALYQMEDYYVSGYHFERF 92
Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP-YVKGAR 179
I+ YP+S+ + + SY ++ DQ T LQ + + Y S V A
Sbjct: 93 ISSYPKSEKLAEASFKSAKSYYELSPVYSKDQTETITALQKLQEFINLYPESEAEVAQAN 152
Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
V +L K EI + Y K +Y A+I F ++++ EEA+ ++
Sbjct: 153 EMVKELDYKLEKKAFEIAKQYNKISDYKASIASFDDFISDFPGTSLREEALYIRFDSAYK 212
Query: 240 LA------LMDE----AREVVSLIQERYPQGYWARYV 266
LA L +E A++ ++RY +
Sbjct: 213 LATKSIEQLKEERLLAAKKYFDAFKKRYASSEFLALA 249
>gi|251790480|ref|YP_003005201.1| tol-pal system protein YbgF [Dickeya zeae Ech1591]
gi|247539101|gb|ACT07722.1| tol-pal system protein YbgF [Dickeya zeae Ech1591]
Length = 272
Score = 53.6 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 19/120 (15%), Positives = 43/120 (35%), Gaps = 14/120 (11%)
Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
+++ + V++Y +S Y A +++ K+ +
Sbjct: 164 EKKQYDQAIVAFQNFVKKYPDSTYQPNANYWLGQLFYNKGKKD--------------DSA 209
Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
F V+ +Y + A EAM ++ D+A+ V + + YP A+ + +
Sbjct: 210 YYFANVVKSYPKSPKASEAMFKVGLIMQEKGQTDKAKAVYQQVIKNYPNTDGAKQAQKRL 269
Score = 44.0 bits (101), Expect = 0.024, Method: Composition-based stats.
Identities = 14/70 (20%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
++ +Y AI FQ + Y D+ + A L + + D++ + + + YP+
Sbjct: 164 EKKQYDQAIVAFQNFVKKYPDSTYQPNANYWLGQLFYNKGKKDDSAYYFANVVKSYPKSP 223
Query: 262 WARYVETLVK 271
+ E + K
Sbjct: 224 --KASEAMFK 231
>gi|262197144|ref|YP_003268353.1| hypothetical protein Hoch_3961 [Haliangium ochraceum DSM 14365]
gi|262080491|gb|ACY16460.1| Tetratricopeptide TPR_2 repeat protein [Haliangium ochraceum DSM
14365]
Length = 1058
Score = 53.6 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/217 (12%), Positives = 63/217 (29%), Gaps = 15/217 (6%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
D ++ +F ++ +A + + +P A + A Y
Sbjct: 566 PADPELVGVIFRNGEMFYDYGDYDEAIKRYGLIVTKYPDDQNAGPAGDRILESLAKAEDY 625
Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ-MIRDVPYDQRATKLMLQYMSRIVERY 169
+ + T + + + + + + RI + +
Sbjct: 626 ENIEEWARKLKTAKAFQSKEQQSRLDRLIVESIGKSGERYAEAGEFEKAASFYLRIPQEF 685
Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
A ++ G Y K A + + A+Y D++ A +A
Sbjct: 686 PQH--------------TMAAQAQMNAGVMYEKAKRPQRAGQAYLALAASYPDSKEAPKA 731
Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
+ Y ++A D A E ++ E +P+ +
Sbjct: 732 AFAAGQLYESVAYFDRAAEAYEVVAETFPRSEQSADA 768
Score = 40.2 bits (91), Expect = 0.36, Method: Composition-based stats.
Identities = 34/232 (14%), Positives = 76/232 (32%), Gaps = 26/232 (11%)
Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
+Y ++Q + ++ EYF Q +P + + + +M +S G++ +A +
Sbjct: 186 LYLVGFAAREQQQYQESLEYFGQVVERYPDSPLYGDAWMMIGEHYFSTGQWPEARAAYAN 245
Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIR------------------------DVPYDQRAT 155
+ + ++ + +
Sbjct: 246 VLARPDSPTYDLALFKTAWADWKLGDPDLAARRFKQVLDLAVEAETSGSAVQRRRRAQLR 305
Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE-VEIGRYYLKRGEYVAAIPRFQ 214
L+Y+ + + + F ++G + + V + Y + EY A ++
Sbjct: 306 DEALEYLVVVFTEDRSISAQEVYDFLASIGGTRYSRDVLVRVADAYFGQSEYERAAQTYR 365
Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY-PQGYWARY 265
++ A E +VEAYVA ++ + L+ E Y P WA
Sbjct: 366 FLIDMKPTGIEAAEYQRAVVEAYVAALQPEQVEAEMRLLVENYGPASKWAEQ 417
Score = 35.9 bits (80), Expect = 5.4, Method: Composition-based stats.
Identities = 15/110 (13%), Positives = 31/110 (28%)
Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
L ++ ++ ++ Y E R R + ++ +
Sbjct: 113 EALFKLAELLWEDARVGFIARMDQYERALEACRQDDEGCKERPSEPRIDLDEPAALYRQL 172
Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
LA + A+ + + A E+ E + ERYP
Sbjct: 173 LAEFPQFRRADLVLYLVGFAAREQQQYQESLEYFGQVVERYPDSPLYGDA 222
>gi|294507873|ref|YP_003571931.1| Conserved hypothetical protein, containing tetratricopeptide repeat
domain [Salinibacter ruber M8]
gi|294344201|emb|CBH24979.1| Conserved hypothetical protein, containing tetratricopeptide repeat
domain [Salinibacter ruber M8]
Length = 639
Score = 53.6 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/215 (12%), Positives = 65/215 (30%), Gaps = 2/215 (0%)
Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
+ Y++ + + + +A F++ + + + +A ++ A + + G++ A+
Sbjct: 420 EEGQYQRGRIAVLRDSLDRARLLFSRLAANAQSSDLADQAQYELALLHFYQGEFDATAAR 479
Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
D + + A+ + R + Y +
Sbjct: 480 AASISENPSADVANDAIALKTLLQEARGPDSLDTPLRTF--ARVRLYERQHAYGRALDSL 537
Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
A +L R + AA+ F+ V + + A+ ++ R
Sbjct: 538 DALLRRHPRHPLADDARFRRANIHLARHDTSAALTAFRAVPERHPRSPFADRSLFRSASL 597
Query: 237 YVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
A A E + YP A + ++
Sbjct: 598 LEANGRPAAAVETYDRLLSEYPTSLLAGDARSRLR 632
Score = 39.4 bits (89), Expect = 0.57, Method: Composition-based stats.
Identities = 21/114 (18%), Positives = 39/114 (34%), Gaps = 7/114 (6%)
Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
+ I E+Y S A+ + A + + Y A ++ L
Sbjct: 313 ATRACEAIQEQYPRSGVAPEAQKLRGDLYRRWADQGADSTTAAQDSVRYARARTAYKTFL 372
Query: 218 ANYSDAEHAEEAMARL----VEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
A+ RL ++AY L D+A+E +S + +P+ A +
Sbjct: 373 RENPGHADYPAALLRLGTLQIDAYRNL---DDAQETLSQLVSNHPETAAAEEGQ 423
>gi|87311428|ref|ZP_01093548.1| hypothetical protein DSM3645_25332 [Blastopirellula marina DSM
3645]
gi|87285840|gb|EAQ77754.1| hypothetical protein DSM3645_25332 [Blastopirellula marina DSM
3645]
Length = 984
Score = 53.6 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 38/231 (16%), Positives = 74/231 (32%), Gaps = 16/231 (6%)
Query: 56 YQREVYEKAV-----LFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
+Y A+ + L +Q++ A + F + P + ++ L A +G+
Sbjct: 134 PDHALYAHALPYLGEIALADQDYDMAEQLFRKAKAAAPSLAMQGEAELGLARTLRDSGQL 193
Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
A + + Q + V R S I + +
Sbjct: 194 HAARTAYRAALKQELTEAHDAKFELGVLEYRLGEHRVAVEHLTEVAQAGDRHSDIAKLWI 253
Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE-----------YVAAIPRFQLVLAN 219
Y + + R Q A+E ++ +Y + + + + +LAN
Sbjct: 254 AKAYYEVRDWPQAEQRLQELAQEEKLSQYRDEIDYLSARIRLEQGETSEGLTQLEQLLAN 313
Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
+ + +EA+ L EA V +D+A + YPQ LV
Sbjct: 314 HPASPWCDEALFYLAEAAVVTGDLDKATTTAKRLIVEYPQREATPQAVRLV 364
Score = 38.6 bits (87), Expect = 0.86, Method: Composition-based stats.
Identities = 30/218 (13%), Positives = 65/218 (29%), Gaps = 18/218 (8%)
Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
+ + A + FS+A + FN+ +A S + Q +A
Sbjct: 767 EELQIMASFWHAESLFHQHKFSEASKLFNEVEALTRGRELAWNSTVALRRAQLAAHLGDW 826
Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
+ + E V + + + Q + R+++
Sbjct: 827 DEA------LRLAELAAVSHPDFEQRFELDYLRGRCLARQANFAGARRAYQRVIDSRLGG 880
Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232
A + IG Y + Y +AI + V A Y ++ +
Sbjct: 881 ------------ASETAAMAQWMIGETYFHQKNYQSAIQAYSRVAALYDFPRWKAGSLLQ 928
Query: 233 LVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
+ + Y D+A+ + YP+ ++A + +
Sbjct: 929 IGKCYEISRQWDKAQTYYDEVSAGYPETFFAGEAQQRL 966
>gi|255009577|ref|ZP_05281703.1| lipoprotein [Bacteroides fragilis 3_1_12]
gi|313147354|ref|ZP_07809547.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|313136121|gb|EFR53481.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
Length = 267
Score = 53.6 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 41/266 (15%), Positives = 85/266 (31%), Gaps = 22/266 (8%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
I +A L + D YE A + + ++++
Sbjct: 1 MKKNIIITLLAATVLSSCGEYNKLLKSTDYEYK-------YEAAKNYFAKGQYNRSATLL 53
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
N+ A +SL M A Y+ Y AA Y YP + + + G +
Sbjct: 54 NELITILKGTDKAEESLYMLAMSYYNQKDYSTAAQSFITYFNTYPRGQFSELARFHAGKA 113
Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK-----EVE 195
+ DQ +T +Q + +E Y S + A+ + +++L K +
Sbjct: 114 LYLDTPEPRLDQSSTYQAIQQLQMFLEYYPQSSRKQEAQNMIFALQDKLVLKELLSARLY 173
Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV----------ALALMDE 245
+++ + Q L +Y ++ EE ++ A + E
Sbjct: 174 YNLGNYLGNNFMSCVITAQNALKDYPYTDYREELSILILRAKYEMAVNSVEDKKMDRYRE 233
Query: 246 AREVVSLIQERYPQGYWARYVETLVK 271
+ + +P+ + + E + K
Sbjct: 234 TVDEYYAFKNEFPESKYLKEAEKIFK 259
>gi|308273438|emb|CBX30040.1| hypothetical protein N47_D28490 [uncultured Desulfobacterium sp.]
Length = 655
Score = 53.6 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 36/266 (13%), Positives = 77/266 (28%), Gaps = 14/266 (5%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSS--RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
K + + + L+ ++ D D + ++ KA Q +++A
Sbjct: 1 MKKCIKLLIIPVLFALLACIPKAPVADFKVPDVKVDDTRGKALFSKAENLFSTQKYNRAL 60
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
E +N+ FP + +LL + + G +A I +PES V V
Sbjct: 61 EAYNEYIVKFPESDNIPSALLRVGNIYDNLGDNNKARITYLRLINNHPESIYVSDAKLKV 120
Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY------------VKGARFYVTVG 185
Y + ++ + + + Y + Y A
Sbjct: 121 LEDYFKQGLFEDVINYSSNIFSENPDNLSGNYLSKAYTLVGDAQIALSQPSDALVSFFNA 180
Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
++ EI L ++ + D + R+ Y E
Sbjct: 181 GSRNTENGNEIIDTKLNNAFSQLEDNDINFLIESTKDNNLKGYLLYRIGVRYYETQKYKE 240
Query: 246 AREVVSLIQERYPQGYWARYVETLVK 271
A V + ++ P + + ++
Sbjct: 241 AETVFKDLIKQIPGHENVKEAKIYLQ 266
>gi|253997442|ref|YP_003049506.1| tol-pal system protein YbgF [Methylotenera mobilis JLW8]
gi|253984121|gb|ACT48979.1| tol-pal system protein YbgF [Methylotenera mobilis JLW8]
Length = 269
Score = 53.6 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 30/265 (11%), Positives = 73/265 (27%), Gaps = 13/265 (4%)
Query: 18 QLYKFALTIFFSIAVCFLVGWER-----QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQN 72
+ L+ F F + +R L+ + Q + + A+ LK+ +
Sbjct: 1 MMKNLILSSLFLTTQLFSISGHSALFDDDEARKKILEVEKTAQSQNQATQSALKDLKQSH 60
Query: 73 FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132
+ + FA + + + G + A E + + +
Sbjct: 61 --DSRLTTLEAITKNGFADMQSQIDALKQENARLKGDLEIANHKVETALQRQKDLYTDSD 118
Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
S + + + K A
Sbjct: 119 ERLRKLESAPAAAAAPVAAVAEKNTQEYQLLELANGLSKESKHKDAFNTYDKFLKDYPNS 178
Query: 193 ------EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
+G Y ++I Q ++ Y+D+ +AM + + + L L+ A
Sbjct: 179 SSASEAMYGLGYSQFALKNYKSSIATQQKLIDTYADSPKVPDAMFNMANSQIQLGLVPGA 238
Query: 247 REVVSLIQERYPQGYWARYVETLVK 271
++ + + ++P + +K
Sbjct: 239 KKTLRDLIAKFPNSELTPAAQKRLK 263
>gi|227114919|ref|ZP_03828575.1| hypothetical protein PcarbP_18240 [Pectobacterium carotovorum
subsp. brasiliensis PBR1692]
Length = 258
Score = 53.6 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 19/120 (15%), Positives = 43/120 (35%), Gaps = 14/120 (11%)
Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
+++ + V++Y +S Y A +++ K+ A
Sbjct: 150 EKKQYDQAISAFQAFVKKYPDSTYQPNANYWLGQLNYNKGKKD--------------DAA 195
Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
F V+ NY + + EA+ ++ D+A+ V + + YP A+ + +
Sbjct: 196 YYFANVVKNYPKSPKSSEALLKVGVIMQEKGQADKAKAVYQQVVKMYPNTESAKQAQKRL 255
Score = 51.7 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 16/70 (22%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
++ +Y AI FQ + Y D+ + A L + D+A + + + YP+
Sbjct: 150 EKKQYDQAISAFQAFVKKYPDSTYQPNANYWLGQLNYNKGKKDDAAYYFANVVKNYPKSP 209
Query: 262 WARYVETLVK 271
+ E L+K
Sbjct: 210 --KSSEALLK 217
>gi|297180915|gb|ADI17119.1| DNA uptake lipoprotein [uncultured gamma proteobacterium
HF0070_03O15]
gi|297181509|gb|ADI17696.1| DNA uptake lipoprotein [uncultured gamma proteobacterium
HF0130_23I23]
Length = 238
Score = 53.3 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 55/200 (27%), Positives = 92/200 (46%), Gaps = 10/200 (5%)
Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
+Y+++ + +NF A E ++ R +PF A ++ + Y +G Y A + E+
Sbjct: 33 LYKQSQDRINAKNFIGAVESLSRIERFYPFGVYAEQARADLIYAFYMSGDYDNAYASSEK 92
Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRD----------VPYDQRATKLMLQYMSRIVERY 169
+I YP + N+DY Y++ GM+ D ++ + RY
Sbjct: 93 FIRLYPRNTNIDYAYFMRGMTGYYEDDGLLSSVFSLDLSKRDVSTAMKSYADLTEFMIRY 152
Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
S YV AR + RN +A+ E++ YYLKRG Y+ A+ R VL N D+ + A
Sbjct: 153 PESEYVDVARERLIFLRNLIASSELDGAEYYLKRGAYLGALNRANYVLKNIPDSSEKDRA 212
Query: 230 MARLVEAYVALALMDEAREV 249
+ + EAY L + A E+
Sbjct: 213 LRIMKEAYEKLGYDEYAEEI 232
>gi|124006428|ref|ZP_01691262.1| conserved hypothetical protein [Microscilla marina ATCC 23134]
gi|123988085|gb|EAY27756.1| conserved hypothetical protein [Microscilla marina ATCC 23134]
Length = 245
Score = 53.3 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 42/224 (18%), Positives = 82/224 (36%), Gaps = 10/224 (4%)
Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
E Y A+ + +++F +A + + + L A+ Y + Q AA
Sbjct: 5 SVEEKYNGAISYYDKKDFYRAGLLLEELIPLIKGQKRSEIANLYYAYCHYYQRQRQLAAY 64
Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
+ + T + SK V+ Y+ S + + DQ T + + R+ S Y
Sbjct: 65 YFKRFYTNFGASKYVEEAMYMYAFSLYKDSPEAYLDQSNTDQAIVASQNFLNRFPQSKYR 124
Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
+ ++ R +L K E + Y + Y AA+ F ++ D+ + EE +
Sbjct: 125 EECSRIISELRKKLETKAYENAKLYYRIRNYRAAVITFTNFQKDFPDSHYNEEVAYLKIL 184
Query: 236 AYVALALMDEAR----------EVVSLIQERYPQGYWARYVETL 269
+ A + R + + + YP ++R E L
Sbjct: 185 SQYEFAQVSTLRRQQERFQGVIKYYTEFIDAYPGSGYSRSAERL 228
>gi|53713909|ref|YP_099901.1| hypothetical protein BF2617 [Bacteroides fragilis YCH46]
gi|60682118|ref|YP_212262.1| lipoprotein [Bacteroides fragilis NCTC 9343]
gi|253567098|ref|ZP_04844549.1| lipoprotein [Bacteroides sp. 3_2_5]
gi|265764255|ref|ZP_06092823.1| lipoprotein [Bacteroides sp. 2_1_16]
gi|52216774|dbj|BAD49367.1| conserved hypothetical protein [Bacteroides fragilis YCH46]
gi|60493552|emb|CAH08339.1| conserved hypothetical lipoprotein [Bacteroides fragilis NCTC 9343]
gi|251944222|gb|EES84731.1| lipoprotein [Bacteroides sp. 3_2_5]
gi|263256863|gb|EEZ28209.1| lipoprotein [Bacteroides sp. 2_1_16]
gi|301163588|emb|CBW23139.1| conserved hypothetical lipoprotein [Bacteroides fragilis 638R]
Length = 267
Score = 53.3 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 45/266 (16%), Positives = 89/266 (33%), Gaps = 22/266 (8%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
I +A L + D YE A + + ++++
Sbjct: 1 MKKNIIITLLAATVLSSCGEYNKLLKSTDYEYK-------YEAAKNYFAKGQYNRSATLL 53
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
N+ A +SL M A Y+ Y AA Y YP + + + G +
Sbjct: 54 NELITILKGGDKAEESLYMLAMSYYNQKDYSTAAQSFITYFNTYPRGQFSELARFHAGKA 113
Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
+ DQ +T +Q + +E Y S + A+ + +++L KE+ R Y
Sbjct: 114 LFLDTPEPRLDQSSTYQAIQQLQMFLEYYPQSSRKQEAQNMIFALQDKLVLKELYSARLY 173
Query: 201 LKRGEYV-----AAIPRFQLVLANYSDAEHAEEAMARLVEAYV----------ALALMDE 245
G Y+ + + Q L +Y ++ E+ ++ A + E
Sbjct: 174 YNLGNYMGNNYLSCVITAQNALKDYPYTDYREDLSILILRAKYEMAVNSVEDKKMDRYRE 233
Query: 246 AREVVSLIQERYPQGYWARYVETLVK 271
+ + +P+ + + E + K
Sbjct: 234 TVDEYYAFKNEFPESKYLKEAERIFK 259
>gi|88861312|ref|ZP_01135943.1| putative periplasmic protein contains a protein prenylyltransferase
domain [Pseudoalteromonas tunicata D2]
gi|88816691|gb|EAR26515.1| putative periplasmic protein contains a protein prenylyltransferase
domain [Pseudoalteromonas tunicata D2]
Length = 248
Score = 53.3 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 18/129 (13%), Positives = 46/129 (35%), Gaps = 14/129 (10%)
Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
+ + + +++Y S YV A +++ ++
Sbjct: 131 YDRAVQMIMKDKRYDQAIPQFQTFLQQYPQSVYVPNAHYWLGQLQSMK------------ 178
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
+ AA F+ V+ Y D+ +AM +L +A+ ++ + ++YP+
Sbjct: 179 --NDVDAAKTHFEAVVNGYPDSNKRPDAMLKLAAVLQKQGNDAKAKTIMQQLIDQYPEST 236
Query: 262 WARYVETLV 270
A+ + +
Sbjct: 237 AAKLAKDRI 245
>gi|94986554|ref|YP_594487.1| hypothetical protein LI0109 [Lawsonia intracellularis PHE/MN1-00]
gi|94730803|emb|CAJ54165.1| uncharacterized protein conserved in bacteria [Lawsonia
intracellularis PHE/MN1-00]
Length = 247
Score = 53.3 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 30/256 (11%), Positives = 71/256 (27%), Gaps = 13/256 (5%)
Query: 14 AWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNF 73
+ +++ + L V G + + ++ Q EV +A
Sbjct: 1 MYYMEVFMYRLYSIILCIVILCSGCSLWTRIKKAIK--SNDTIQEEVLNEA--------- 49
Query: 74 SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
+A S + L + + + + + P + +
Sbjct: 50 -EAGTIAEALSELDADREKESSTYLNKISDKKTNIDPESVEKNTQHVKSVDPSPSLDETI 108
Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
+ ++ ++ + + + R
Sbjct: 109 PKKKVQIDNNNNKLSQSQEQKMYKDALHLYELHKYNESITLFDQFMEKYPKSRLMP-NAL 167
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
G + ++ AI F+ V A Y + A +A+ ++ +Y AL D A +
Sbjct: 168 YWKGENLYAQQKFADAIFMFKSVTATYPKHQKASDALLKVGMSYRALGDQDNATLHFRAL 227
Query: 254 QERYPQGYWARYVETL 269
E YP+ + + L
Sbjct: 228 YEDYPKSTAVQRAQKL 243
>gi|78358000|ref|YP_389449.1| TPR repeat-containing protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78220405|gb|ABB39754.1| TPR repeat [Desulfovibrio desulfuricans subsp. desulfuricans str.
G20]
Length = 1154
Score = 53.3 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 30/214 (14%), Positives = 70/214 (32%), Gaps = 15/214 (7%)
Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
D + V E+ +A + + A E + R ++ +L
Sbjct: 485 DEDGNPVDPPPTSAELLFRAKAAMNNGDQQTALETLEELRRRNDLEPELQEEMLYLLSDV 544
Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
+ + + + E+ N + + + + + + Y +
Sbjct: 545 LYSRGKDDLLASYDTITSALTEAMNYNLSSERIPGA-LLRMGLINLKIGNIREAEAYFNI 603
Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
+ + + + G ++ +G+Y A +FQ V+ N+ D+
Sbjct: 604 LKREHPDD--------------ENIPLIYYYWGDHFFNKGQYQKAADQFQFVVQNHPDSR 649
Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
E+ L A L D+A ++V I++R+P
Sbjct: 650 FVRESSVGLARALYRLGYYDQAYQIVDYIEKRWP 683
Score = 49.4 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 36/215 (16%), Positives = 69/215 (32%), Gaps = 21/215 (9%)
Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
+ +++ R + ++ LK N +A YFN R+ P
Sbjct: 566 EAMNYNLSSERIPGALLRMGLINLKIGNIREAEAYFNILKREHPDDENIPLIYYYWGDHF 625
Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
++ G+YQ+AA + + +P+S+ V L +
Sbjct: 626 FNKGQYQKAADQFQFVVQNHPDSRFV------------------RESSVGLARALYRLGY 667
Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
+ Y Y++ V ++ K + + + D E
Sbjct: 668 YDQAYQIVDYIEKRWPRFYVEYPPFLNMMGDVSYRMQKYEKARIHYWTYYNID---PDGE 724
Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
A+ +ARL + Y+ D AREV ++P
Sbjct: 725 EADLILARLGDIYLRQDKTDAAREVYEEAARKFPD 759
Score = 46.3 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 33/255 (12%), Positives = 69/255 (27%), Gaps = 29/255 (11%)
Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
+ + D Y F + + KA + F ++ P + R+S + A
Sbjct: 602 NILKREHPDDENIPLIYYYWGDHFFNKGQYQKAADQFQFVVQNHPDSRFVRESSVGLARA 661
Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG------MSYAQMIRDVPYDQRATKL 157
Y G Y QA + + ++P + + M + R +
Sbjct: 662 LYRLGYYDQAYQIVDYIEKRWPRFYVEYPPFLNMMGDVSYRMQKYEKARIHYWTYYNIDP 721
Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI--------------------- 196
+ I+ R + + + A K +
Sbjct: 722 DGEEADLILARLGDIYLRQDKTDAAREVYEEAARKFPDRDGGLISLMRLAEEGIYDTPSI 781
Query: 197 --GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
R + + ++ + ++ A A +L Y+ EA +
Sbjct: 782 GDMFTVFDRPFSLRPRDIYLKIINEHPQSDLAPLAQVKLAMWYLWNRQYPEAMAAATDFA 841
Query: 255 ERYPQGYWARYVETL 269
E+YP G +
Sbjct: 842 EKYPAGELLPRAREV 856
Score = 39.4 bits (89), Expect = 0.49, Method: Composition-based stats.
Identities = 6/39 (15%), Positives = 17/39 (43%)
Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
+E A+ R+ + + + EA ++++ +P
Sbjct: 574 SERIPGALLRMGLINLKIGNIREAEAYFNILKREHPDDE 612
Score = 39.0 bits (88), Expect = 0.76, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 24/71 (33%)
Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
+G LK G A F ++ + D E+ + + +A + + +
Sbjct: 584 MGLINLKIGNIREAEAYFNILKREHPDDENIPLIYYYWGDHFFNKGQYQKAADQFQFVVQ 643
Query: 256 RYPQGYWARYV 266
+P + R
Sbjct: 644 NHPDSRFVRES 654
>gi|296103327|ref|YP_003613473.1| tol-pal system protein YbgF [Enterobacter cloacae subsp. cloacae
ATCC 13047]
gi|295057786|gb|ADF62524.1| tol-pal system protein YbgF [Enterobacter cloacae subsp. cloacae
ATCC 13047]
Length = 264
Score = 53.3 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 27/201 (13%), Positives = 57/201 (28%), Gaps = 14/201 (6%)
Query: 70 EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129
++ NQ + SL A Q A+ + +
Sbjct: 74 RGQIQESQYQLNQVVERQKQILLQIDSLSSGGAAAQPAAGDQSGAATDAPAPSADASAAT 133
Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
V + + D+ + V++Y +S Y A +++
Sbjct: 134 GAPVQSGDANTDYNAAIALVQDKSRQDDAIVAFQNFVKKYPDSTYQPNANYWLGQLNYNK 193
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
K+ A F V+ NY + A +AM ++ +A+ V
Sbjct: 194 GKKD--------------DAAFYFASVVKNYPKSPKAPDAMFKVGVIMQDKGDTAKAKAV 239
Query: 250 VSLIQERYPQGYWARYVETLV 270
+ ++P A+ + +
Sbjct: 240 YQQVVAKFPGTEGAKQAQKRL 260
>gi|95930002|ref|ZP_01312742.1| Tetratricopeptide TPR_2 [Desulfuromonas acetoxidans DSM 684]
gi|95133971|gb|EAT15630.1| Tetratricopeptide TPR_2 [Desulfuromonas acetoxidans DSM 684]
Length = 292
Score = 53.3 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 41/94 (43%), Gaps = 1/94 (1%)
Query: 179 RFYVTVGRNQLAAKEVEIG-RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
+F + ++ LA + +Y +AI +FQ V+ Y + A+ + A+
Sbjct: 196 QFIQSYPQHDLAVNAMYWIGETLYGDKQYESAILQFQDVIQKYPNHPKMPAALMKQGLAF 255
Query: 238 VALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
AL + A+ ++ + + YPQ A + +K
Sbjct: 256 YALGDVRNAKIILQKVVDNYPQTPEADKAQERLK 289
Score = 35.9 bits (80), Expect = 6.4, Method: Composition-based stats.
Identities = 14/92 (15%), Positives = 37/92 (40%), Gaps = 1/92 (1%)
Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQ-NFSKAYEYFNQCSRDFPFAGVARKSLLM 99
+ + +Y +A+ +++ +F+K+ + F Q + +P +A ++
Sbjct: 154 NQRDEKPTAASATQDQPDALYHQALQLVQQGSDFTKSRDLFRQFIQSYPQHDLAVNAMYW 213
Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
Y +Y+ A ++ I +YP +
Sbjct: 214 IGETLYGDKQYESAILQFQDVIQKYPNHPKMP 245
>gi|114330318|ref|YP_746540.1| TPR repeat-containing protein [Nitrosomonas eutropha C91]
gi|114307332|gb|ABI58575.1| Tetratricopeptide TPR_2 repeat protein [Nitrosomonas eutropha C91]
Length = 273
Score = 53.3 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/223 (11%), Positives = 55/223 (24%), Gaps = 4/223 (1%)
Query: 49 DSVTDVRYQREVYEKAVLFLKE-QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107
+ V + E++ +A +E E L + ++
Sbjct: 50 EEVFMGQSLIELHSQAEALKEEMGKLRGKIEVLED-ENRSLRKQQKDFYLDLDNRLRQIE 108
Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
+ E E D + + +
Sbjct: 109 PGSASVSVPDSEISVPASEPPAADIKNTTPLKASVILQLPDTVQRNRYDAAYALFKD--G 166
Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
Y+ S + A IG + + AI Q ++ Y D+
Sbjct: 167 DYSGSIASFESFLSRHPQSALAPAAAYWIGNAHYAMRNFDKAIAAQQRLIETYPDSPKVP 226
Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
+ + + + V + AR+ + + YP A + +
Sbjct: 227 DGLLNMASSQVEIGQKAAARKTLVNLITNYPGTEAAEKAKRRL 269
>gi|238790500|ref|ZP_04634269.1| hypothetical protein yfred0001_12300 [Yersinia frederiksenii ATCC
33641]
gi|238721444|gb|EEQ13115.1| hypothetical protein yfred0001_12300 [Yersinia frederiksenii ATCC
33641]
Length = 260
Score = 53.3 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
++ +Y AI FQ + Y + + A L + Y D+A +++ + YP+
Sbjct: 152 EKKQYDQAITAFQSFVKQYPKSTYQPNANYWLGQLYYNKGKKDDAAYYYAVVVKNYPKSP 211
Query: 262 WARYVETLVK 271
+ E + K
Sbjct: 212 --KSSEAMFK 219
Score = 52.5 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 19/120 (15%), Positives = 44/120 (36%), Gaps = 14/120 (11%)
Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
+++ + V++Y S Y A +++ K+ A
Sbjct: 152 EKKQYDQAITAFQSFVKQYPKSTYQPNANYWLGQLYYNKGKKD--------------DAA 197
Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
+ +V+ NY + + EAM ++ D+A+ V + ++YP A+ + +
Sbjct: 198 YYYAVVVKNYPKSPKSSEAMFKVGVIMQDKGQSDKAKAVYQQVIKQYPNTDAAKQAQKRL 257
>gi|261341332|ref|ZP_05969190.1| putative periplasmic protein [Enterobacter cancerogenus ATCC 35316]
gi|288316637|gb|EFC55575.1| putative periplasmic protein [Enterobacter cancerogenus ATCC 35316]
Length = 262
Score = 53.3 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 19/121 (15%), Positives = 41/121 (33%), Gaps = 14/121 (11%)
Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
D+ + V++Y +S Y A +++ K+ A
Sbjct: 152 QDKSRQDDAIVAFQNFVKKYPDSTYQPNANYWLGQLNYNKGKKD--------------DA 197
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
F V+ NY + A +AM ++ +A+ V + ++P A+ +
Sbjct: 198 AFYFASVVKNYPKSPKAPDAMFKVGVIMQDKGDTAKAKAVYQQVVAKFPGTEGAKQAQKR 257
Query: 270 V 270
+
Sbjct: 258 L 258
>gi|324020374|gb|EGB89593.1| tol-pal system protein YbgF [Escherichia coli MS 117-3]
Length = 244
Score = 52.9 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 27/79 (34%), Gaps = 2/79 (2%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ A+ FQ + NY D+ + A L + D+A +
Sbjct: 127 YNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDDAAYYFAS 186
Query: 253 IQERYPQGYWARYVETLVK 271
+ + YP+ + + + K
Sbjct: 187 VVKNYPKSP--KAADAMFK 203
Score = 50.6 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/121 (15%), Positives = 41/121 (33%), Gaps = 14/121 (11%)
Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
D+ + ++ Y +S Y+ A +++ K+ A
Sbjct: 135 QDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKD--------------DA 180
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
F V+ NY + A +AM ++ +A+ V + +YP A+ +
Sbjct: 181 AYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKYPGTDGAKQAQKR 240
Query: 270 V 270
+
Sbjct: 241 L 241
>gi|16116639|emb|CAC82711.1| YbgF protein [Erwinia chrysanthemi]
Length = 274
Score = 52.9 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 21/120 (17%), Positives = 43/120 (35%), Gaps = 14/120 (11%)
Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
+++ + V++Y +S Y A +++ K+ A
Sbjct: 166 EKKQYDQAIVAFQNFVKKYPDSTYQPNANYWLGQLFYNKGKKD--------------DAA 211
Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
F V+ NY + A EAM ++ D+A+ V + + YP A+ + +
Sbjct: 212 YYFANVVKNYPKSPKASEAMFKVGVIMQEKGQTDKAKAVYQQVVKTYPNTDGAKQAQKRL 271
Score = 50.6 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
++ +Y AI FQ + Y D+ + A L + + D+A + + + YP+
Sbjct: 166 EKKQYDQAIVAFQNFVKKYPDSTYQPNANYWLGQLFYNKGKKDDAAYYFANVVKNYPKSP 225
Query: 262 WARYVETLVK 271
+ E + K
Sbjct: 226 --KASEAMFK 233
>gi|322833829|ref|YP_004213856.1| tol-pal system protein YbgF [Rahnella sp. Y9602]
gi|321169030|gb|ADW74729.1| tol-pal system protein YbgF [Rahnella sp. Y9602]
Length = 263
Score = 52.9 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 14/65 (21%), Positives = 28/65 (43%)
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
++ +Y AI FQ + Y D+ + A L + Y D+A +++ + YP+
Sbjct: 155 EKKQYDEAIAAFQSFVKKYPDSTYQPNANYWLGQLYYNKGKKDDAAYYFAVVVKNYPKSP 214
Query: 262 WARYV 266
+
Sbjct: 215 KSSDA 219
Score = 51.7 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/120 (15%), Positives = 46/120 (38%), Gaps = 14/120 (11%)
Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
+++ + V++Y +S Y A +++ K+ A
Sbjct: 155 EKKQYDEAIAAFQSFVKKYPDSTYQPNANYWLGQLYYNKGKKD--------------DAA 200
Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
F +V+ NY + + +AM ++ D+A+ V + + ++YP A+ + +
Sbjct: 201 YYFAVVVKNYPKSPKSSDAMFKVGVIMQEKGQADKAKAVFAQVVKQYPNTDAAKQAQKRL 260
>gi|331645893|ref|ZP_08346996.1| putative periplasmic protein [Escherichia coli M605]
gi|281177885|dbj|BAI54215.1| conserved hypothetical protein [Escherichia coli SE15]
gi|330910493|gb|EGH39003.1| TPR repeat containing exported protein [Escherichia coli AA86]
gi|331044645|gb|EGI16772.1| putative periplasmic protein [Escherichia coli M605]
Length = 263
Score = 52.9 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 27/79 (34%), Gaps = 2/79 (2%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ A+ FQ + NY D+ + A L + D+A +
Sbjct: 146 YNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDDAAYYFAS 205
Query: 253 IQERYPQGYWARYVETLVK 271
+ + YP+ + + + K
Sbjct: 206 VVKNYPKSP--KAADAMFK 222
Score = 50.6 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/121 (15%), Positives = 41/121 (33%), Gaps = 14/121 (11%)
Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
D+ + ++ Y +S Y+ A +++ K+ A
Sbjct: 154 QDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKD--------------DA 199
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
F V+ NY + A +AM ++ +A+ V + +YP A+ +
Sbjct: 200 AYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKYPGTDGAKQAQKR 259
Query: 270 V 270
+
Sbjct: 260 L 260
>gi|324009582|gb|EGB78801.1| tol-pal system protein YbgF [Escherichia coli MS 57-2]
Length = 249
Score = 52.9 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 27/79 (34%), Gaps = 2/79 (2%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ A+ FQ + NY D+ + A L + D+A +
Sbjct: 132 YNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDDAAYYFAS 191
Query: 253 IQERYPQGYWARYVETLVK 271
+ + YP+ + + + K
Sbjct: 192 VVKNYPKSP--KAADAMFK 208
Score = 50.6 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/121 (15%), Positives = 41/121 (33%), Gaps = 14/121 (11%)
Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
D+ + ++ Y +S Y+ A +++ K+ A
Sbjct: 140 QDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKD--------------DA 185
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
F V+ NY + A +AM ++ +A+ V + +YP A+ +
Sbjct: 186 AYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKYPGTDGAKQAQKR 245
Query: 270 V 270
+
Sbjct: 246 L 246
>gi|238752129|ref|ZP_04613612.1| hypothetical protein yrohd0001_570 [Yersinia rohdei ATCC 43380]
gi|238709706|gb|EEQ01941.1| hypothetical protein yrohd0001_570 [Yersinia rohdei ATCC 43380]
Length = 269
Score = 52.9 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
++ +Y AI FQ + Y + + A L + Y D+A +++ + YP+
Sbjct: 161 EKKQYDQAITAFQSFVKQYPKSTYQPNANYWLGQLYYNKGKKDDAAYYYAVVVKNYPKSP 220
Query: 262 WARYVETLVK 271
+ E + K
Sbjct: 221 --KSSEAMFK 228
Score = 50.6 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/120 (15%), Positives = 44/120 (36%), Gaps = 14/120 (11%)
Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
+++ + V++Y S Y A +++ K+ A
Sbjct: 161 EKKQYDQAITAFQSFVKQYPKSTYQPNANYWLGQLYYNKGKKD--------------DAA 206
Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
+ +V+ NY + + EAM ++ D+A+ V + ++YP A+ + +
Sbjct: 207 YYYAVVVKNYPKSPKSSEAMFKVGVIMQDKGQSDKAKAVYQQVIKQYPTTDAAKQAQKRL 266
>gi|323170863|gb|EFZ56513.1| tol-pal system protein YbgF [Escherichia coli LT-68]
Length = 254
Score = 52.9 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 27/79 (34%), Gaps = 2/79 (2%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ A+ FQ + NY D+ + A L + D+A +
Sbjct: 137 YNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDDAAYYFAS 196
Query: 253 IQERYPQGYWARYVETLVK 271
+ + YP+ + + + K
Sbjct: 197 VVKNYPKSP--KAADAMFK 213
Score = 50.6 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/121 (15%), Positives = 41/121 (33%), Gaps = 14/121 (11%)
Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
D+ + ++ Y +S Y+ A +++ K+ A
Sbjct: 145 QDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKD--------------DA 190
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
F V+ NY + A +AM ++ +A+ V + +YP A+ +
Sbjct: 191 AYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKYPGTDGAKQAQKR 250
Query: 270 V 270
+
Sbjct: 251 L 251
>gi|149366874|ref|ZP_01888908.1| putative exported protein [Yersinia pestis CA88-4125]
gi|165924608|ref|ZP_02220440.1| tol-pal system protein YbgF [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165938319|ref|ZP_02226877.1| tol-pal system protein YbgF [Yersinia pestis biovar Orientalis str.
IP275]
gi|166011572|ref|ZP_02232470.1| tol-pal system protein YbgF [Yersinia pestis biovar Antiqua str.
E1979001]
gi|167419821|ref|ZP_02311574.1| tol-pal system protein YbgF [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|218928294|ref|YP_002346169.1| tol-pal system protein YbgF [Yersinia pestis CO92]
gi|229841063|ref|ZP_04461222.1| SecB-dependent secretory protein [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229843167|ref|ZP_04463313.1| SecB-dependent secretory protein [Yersinia pestis biovar Orientalis
str. India 195]
gi|294503131|ref|YP_003567193.1| hypothetical protein YPZ3_1021 [Yersinia pestis Z176003]
gi|115346905|emb|CAL19792.1| putative exported protein [Yersinia pestis CO92]
gi|149291248|gb|EDM41323.1| putative exported protein [Yersinia pestis CA88-4125]
gi|165913697|gb|EDR32316.1| tol-pal system protein YbgF [Yersinia pestis biovar Orientalis str.
IP275]
gi|165923668|gb|EDR40800.1| tol-pal system protein YbgF [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165989520|gb|EDR41821.1| tol-pal system protein YbgF [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166962562|gb|EDR58583.1| tol-pal system protein YbgF [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|229689514|gb|EEO81575.1| SecB-dependent secretory protein [Yersinia pestis biovar Orientalis
str. India 195]
gi|229697429|gb|EEO87476.1| SecB-dependent secretory protein [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|262361167|gb|ACY57888.1| hypothetical protein YPD4_0979 [Yersinia pestis D106004]
gi|262365276|gb|ACY61833.1| hypothetical protein YPD8_1148 [Yersinia pestis D182038]
gi|294353590|gb|ADE63931.1| hypothetical protein YPZ3_1021 [Yersinia pestis Z176003]
Length = 269
Score = 52.9 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
++ +Y AI FQ + Y + + A L + Y D+A +++ + YP+
Sbjct: 161 EKKQYDQAITVFQSFVKQYPKSTYQPNANYWLGQLYYNKGKKDDAAYYYAVVVKNYPKSP 220
Query: 262 WARYVETLVK 271
+ E + K
Sbjct: 221 --KSSEAMFK 228
Score = 52.5 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 19/120 (15%), Positives = 44/120 (36%), Gaps = 14/120 (11%)
Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
+++ + V++Y S Y A +++ K+ A
Sbjct: 161 EKKQYDQAITVFQSFVKQYPKSTYQPNANYWLGQLYYNKGKKD--------------DAA 206
Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
+ +V+ NY + + EAM ++ D+A+ V + ++YP A+ + +
Sbjct: 207 YYYAVVVKNYPKSPKSSEAMFKVGVIMQDKGQSDKAKAVYQQVIKQYPNTDAAKQAQKRL 266
>gi|188995218|ref|YP_001929470.1| hypothetical protein PGN_1354 [Porphyromonas gingivalis ATCC 33277]
gi|188594898|dbj|BAG33873.1| conserved hypothetical protein [Porphyromonas gingivalis ATCC
33277]
Length = 310
Score = 52.9 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 49/261 (18%), Positives = 88/261 (33%), Gaps = 24/261 (9%)
Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
IFF+ D+ Y A F E+ +SKA
Sbjct: 46 LIFFAALTFLFASCGEFVRIQQSPDTSLK-------YSYAKKFYNERKYSKAASLLEDVR 98
Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
+ + + + A + A +EY +YP+ + Y G + +
Sbjct: 99 GIYDGTSEGEQLMFLLAECYLEMRRDADAGICYQEYYNKYPKGLRAEEARYKAGYCFYEA 158
Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK-- 202
D DQ T L +Q + ++ + N Y K A + +++LA KE + Y
Sbjct: 159 SPDSRLDQSDTYLAIQELQSYLDFFPNGKYAKEAENMLFGLQDKLAYKEYRTAKLYYNLG 218
Query: 203 ---RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA-----------LMDEARE 248
Y + I + L Y +H EE + +++A A D A +
Sbjct: 219 LYLGNNYRSCIVTAEAALKTYPYTKHREELVFLMLQAMYEEASFSVSEKLQTRYRDVADQ 278
Query: 249 VVSLIQERYPQGYWARYVETL 269
+ I E +P G + + + +
Sbjct: 279 YFAYINE-FPNGKYLKQAKKI 298
>gi|331656761|ref|ZP_08357723.1| putative periplasmic protein [Escherichia coli TA206]
gi|222032478|emb|CAP75217.1| Uncharacterized protein ybgF [Escherichia coli LF82]
gi|312945266|gb|ADR26093.1| tol-pal system protein YbgF [Escherichia coli O83:H1 str. NRG 857C]
gi|315299255|gb|EFU58507.1| tol-pal system protein YbgF [Escherichia coli MS 16-3]
gi|331055009|gb|EGI27018.1| putative periplasmic protein [Escherichia coli TA206]
Length = 263
Score = 52.9 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 27/79 (34%), Gaps = 2/79 (2%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ A+ FQ + NY D+ + A L + D+A +
Sbjct: 146 YNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDDAAYYFAS 205
Query: 253 IQERYPQGYWARYVETLVK 271
+ + YP+ + + + K
Sbjct: 206 VVKNYPKSP--KAADAMFK 222
Score = 50.6 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/121 (15%), Positives = 41/121 (33%), Gaps = 14/121 (11%)
Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
D+ + ++ Y +S Y+ A +++ K+ A
Sbjct: 154 QDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKD--------------DA 199
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
F V+ NY + A +AM ++ +A+ V + +YP A+ +
Sbjct: 200 AYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKYPGTDGAKQAQKR 259
Query: 270 V 270
+
Sbjct: 260 L 260
>gi|91209777|ref|YP_539763.1| tol-pal system protein YbgF [Escherichia coli UTI89]
gi|110640950|ref|YP_668678.1| tol-pal system protein YbgF [Escherichia coli 536]
gi|117622933|ref|YP_851846.1| hypothetical protein APECO1_1339 [Escherichia coli APEC O1]
gi|218557655|ref|YP_002390568.1| tol-pal system protein YbgF [Escherichia coli S88]
gi|227884291|ref|ZP_04002096.1| tol-pal system protein YbgF [Escherichia coli 83972]
gi|237707295|ref|ZP_04537776.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
gi|300992343|ref|ZP_07179866.1| tol-pal system protein YbgF [Escherichia coli MS 200-1]
gi|300993168|ref|ZP_07180251.1| tol-pal system protein YbgF [Escherichia coli MS 45-1]
gi|301051338|ref|ZP_07198161.1| tol-pal system protein YbgF [Escherichia coli MS 185-1]
gi|331682172|ref|ZP_08382794.1| putative tol-pal system protein YbgF [Escherichia coli H299]
gi|91071351|gb|ABE06232.1| hypothetical protein UTI89_C0739 [Escherichia coli UTI89]
gi|110342542|gb|ABG68779.1| putative exported protein [Escherichia coli 536]
gi|115512057|gb|ABJ00132.1| conserved hypothetical protein [Escherichia coli APEC O1]
gi|218364424|emb|CAR02104.1| putative RNA binding protein [Escherichia coli S88]
gi|226898505|gb|EEH84764.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
gi|227839043|gb|EEJ49509.1| tol-pal system protein YbgF [Escherichia coli 83972]
gi|294493984|gb|ADE92740.1| tol-pal system protein YbgF [Escherichia coli IHE3034]
gi|300297000|gb|EFJ53385.1| tol-pal system protein YbgF [Escherichia coli MS 185-1]
gi|300305360|gb|EFJ59880.1| tol-pal system protein YbgF [Escherichia coli MS 200-1]
gi|300406698|gb|EFJ90236.1| tol-pal system protein YbgF [Escherichia coli MS 45-1]
gi|307552593|gb|ADN45368.1| tol-pal system protein YbgF [Escherichia coli ABU 83972]
gi|315292656|gb|EFU52008.1| tol-pal system protein YbgF [Escherichia coli MS 153-1]
gi|323191087|gb|EFZ76352.1| tol-pal system protein YbgF [Escherichia coli RN587/1]
gi|323953132|gb|EGB48999.1| tol-pal system protein YbgF [Escherichia coli H252]
gi|323958486|gb|EGB54192.1| tol-pal system protein YbgF [Escherichia coli H263]
gi|331080596|gb|EGI51772.1| putative tol-pal system protein YbgF [Escherichia coli H299]
Length = 263
Score = 52.9 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 27/79 (34%), Gaps = 2/79 (2%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ A+ FQ + NY D+ + A L + D+A +
Sbjct: 146 YNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDDAAYYFAS 205
Query: 253 IQERYPQGYWARYVETLVK 271
+ + YP+ + + + K
Sbjct: 206 VVKNYPKSP--KAADAMFK 222
Score = 50.6 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/121 (15%), Positives = 41/121 (33%), Gaps = 14/121 (11%)
Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
D+ + ++ Y +S Y+ A +++ K+ A
Sbjct: 154 QDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKD--------------DA 199
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
F V+ NY + A +AM ++ +A+ V + +YP A+ +
Sbjct: 200 AYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKYPGTDGAKQAQKR 259
Query: 270 V 270
+
Sbjct: 260 L 260
>gi|85058866|ref|YP_454568.1| hypothetical protein SG0888 [Sodalis glossinidius str. 'morsitans']
gi|84779386|dbj|BAE74163.1| conserved hypothetical protein [Sodalis glossinidius str.
'morsitans']
Length = 246
Score = 52.9 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/190 (13%), Positives = 55/190 (28%), Gaps = 14/190 (7%)
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
+ L Q + + S + + + +
Sbjct: 68 RDIDSLRGQIQENQYQLSQVVERQKQIYQQMDSLSSQTPAASSDGQPQASASAGGSDANT 127
Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
+ +++ + V+RY +S Y A +++ K+
Sbjct: 128 DYNEAVALVLEKKQYDQAISAFQSFVKRYPDSTYQPNANYWLGQLNYNQGEKD------- 180
Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
A F LV+ NY + A +A+ ++ D+AR V + + YP
Sbjct: 181 -------DAAYYFALVVKNYPKSPKASDALLKVGVIMQEKGQKDKARAVYQQVGKLYPSA 233
Query: 261 YWARYVETLV 270
A+ + +
Sbjct: 234 EAAKQAQKRL 243
Score = 50.9 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 33/79 (41%), Gaps = 2/79 (2%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
E L++ +Y AI FQ + Y D+ + A L + D+A +L
Sbjct: 129 YNEAVALVLEKKQYDQAISAFQSFVKRYPDSTYQPNANYWLGQLNYNQGEKDDAAYYFAL 188
Query: 253 IQERYPQGYWARYVETLVK 271
+ + YP+ + + L+K
Sbjct: 189 VVKNYPKSP--KASDALLK 205
>gi|218688533|ref|YP_002396745.1| tol-pal system protein YbgF [Escherichia coli ED1a]
gi|306812851|ref|ZP_07447044.1| tol-pal system protein YbgF [Escherichia coli NC101]
gi|218426097|emb|CAR06915.1| putative RNA binding protein [Escherichia coli ED1a]
gi|305853614|gb|EFM54053.1| tol-pal system protein YbgF [Escherichia coli NC101]
Length = 263
Score = 52.9 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 27/79 (34%), Gaps = 2/79 (2%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ A+ FQ + NY D+ + A L + D+A +
Sbjct: 146 YNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDDAAYYFAS 205
Query: 253 IQERYPQGYWARYVETLVK 271
+ + YP+ + + + K
Sbjct: 206 VVKNYPKSP--KAADAMFK 222
Score = 50.6 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/121 (15%), Positives = 41/121 (33%), Gaps = 14/121 (11%)
Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
D+ + ++ Y +S Y+ A +++ K+ A
Sbjct: 154 QDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKD--------------DA 199
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
F V+ NY + A +AM ++ +A+ V + +YP A+ +
Sbjct: 200 AYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKYPGTDGAKQAQKR 259
Query: 270 V 270
+
Sbjct: 260 L 260
>gi|198282219|ref|YP_002218540.1| tol-pal system protein YbgF [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218666817|ref|YP_002424584.1| hypothetical protein AFE_0070 [Acidithiobacillus ferrooxidans ATCC
23270]
gi|198246740|gb|ACH82333.1| tol-pal system protein YbgF [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218519030|gb|ACK79616.1| conserved hypothetical protein [Acidithiobacillus ferrooxidans ATCC
23270]
Length = 272
Score = 52.9 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 39/79 (49%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+G+ G+ AA+ +V A +S + A EAM R+ E Y A+ +AR V+S
Sbjct: 188 YYWLGQAQYVLGQNDAALKSLHVVEAQFSQSSKAPEAMLRMAEIYQAIGQSGKARTVLSK 247
Query: 253 IQERYPQGYWARYVETLVK 271
I +YP A+ E ++
Sbjct: 248 IISQYPSTPSAQKAEAQLQ 266
Score = 44.8 bits (103), Expect = 0.013, Method: Composition-based stats.
Identities = 13/70 (18%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
++G+Y +A+ Q + Y + +A L +A L D A + + +++ ++ Q
Sbjct: 160 RQGKYGSAVTGLQGFIQKYPQSSLVPDAYYWLGQAQYVLGQNDAALKSLHVVEAQFSQS- 218
Query: 262 WARYVETLVK 271
++ E +++
Sbjct: 219 -SKAPEAMLR 227
>gi|123443144|ref|YP_001007118.1| tol-pal system protein YbgF [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|332160931|ref|YP_004297508.1| tol-pal system protein YbgF [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|122090105|emb|CAL12968.1| putative exported protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|318604838|emb|CBY26336.1| TPR repeat containing exported protein; Putative periplasmic
protein contains a protein prenylyltransferase domain
[Yersinia enterocolitica subsp. palearctica Y11]
gi|325665161|gb|ADZ41805.1| tol-pal system protein YbgF [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330864067|emb|CBX74144.1| uncharacterized protein ybgF [Yersinia enterocolitica W22703]
Length = 269
Score = 52.9 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
++ +Y AI FQ + Y + + A L + Y D+A +++ + YP+
Sbjct: 161 EKKQYDQAITAFQGFVKQYPKSTYQPNANYWLGQLYYNKGKKDDAAYYYAVVVKNYPKSP 220
Query: 262 WARYVETLVK 271
+ E + K
Sbjct: 221 --KSSEAMFK 228
Score = 52.5 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 19/120 (15%), Positives = 44/120 (36%), Gaps = 14/120 (11%)
Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
+++ + V++Y S Y A +++ K+ A
Sbjct: 161 EKKQYDQAITAFQGFVKQYPKSTYQPNANYWLGQLYYNKGKKD--------------DAA 206
Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
+ +V+ NY + + EAM ++ D+A+ V + ++YP A+ + +
Sbjct: 207 YYYAVVVKNYPKSPKSSEAMFKVGVIMQDKGQSDKAKAVYQQVIKQYPNTDAAKQAQKRL 266
>gi|153806675|ref|ZP_01959343.1| hypothetical protein BACCAC_00945 [Bacteroides caccae ATCC 43185]
gi|149131352|gb|EDM22558.1| hypothetical protein BACCAC_00945 [Bacteroides caccae ATCC 43185]
Length = 267
Score = 52.9 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 45/265 (16%), Positives = 90/265 (33%), Gaps = 22/265 (8%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
I +A L + D YE A + + ++++
Sbjct: 1 MKKNIIITLLAAATLTSCGEYNKLLKSTDYEYK-------YEAAKNYFAKGQYNRSATLL 53
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
N+ A +SL M Y+ YQ AA Y YP + + G +
Sbjct: 54 NELITILKGTDKAEESLYMLGMSYYNQKDYQTAAQTFITYFNTYPRGTFTELARFHAGKA 113
Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
+ DQ +T +Q + +E + NS + A+ + +++L KE+ + Y
Sbjct: 114 LFLDTPEPRLDQSSTYQAIQQLQMFMEYFPNSVKKQEAQDMIFALQDKLVLKELYSAKLY 173
Query: 201 LKRGEYV-----AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM----DEAREVVS 251
G Y+ + + Q L +Y ++ EE ++ A +A+ +A
Sbjct: 174 YNLGNYMGNNYESCVITAQNALKDYPYTDYREELSILILRARYEMAIYSVEDKKADRYRE 233
Query: 252 L------IQERYPQGYWARYVETLV 270
+ +P+ + + E +
Sbjct: 234 TVDEYYAFKNEFPESKYLKEAEKIF 258
>gi|215485764|ref|YP_002328195.1| tol-pal system protein YbgF [Escherichia coli O127:H6 str.
E2348/69]
gi|312965178|ref|ZP_07779415.1| tol-pal system protein YbgF [Escherichia coli 2362-75]
gi|215263836|emb|CAS08174.1| predicted protein [Escherichia coli O127:H6 str. E2348/69]
gi|312290269|gb|EFR18152.1| tol-pal system protein YbgF [Escherichia coli 2362-75]
Length = 263
Score = 52.9 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 27/79 (34%), Gaps = 2/79 (2%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ A+ FQ + NY D+ + A L + D+A +
Sbjct: 146 YNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDDAAYYFAS 205
Query: 253 IQERYPQGYWARYVETLVK 271
+ + YP+ + + + K
Sbjct: 206 VVKNYPKSP--KAADAMFK 222
Score = 50.6 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/121 (15%), Positives = 41/121 (33%), Gaps = 14/121 (11%)
Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
D+ + ++ Y +S Y+ A +++ K+ A
Sbjct: 154 QDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKD--------------DA 199
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
F V+ NY + A +AM ++ +A+ V + +YP A+ +
Sbjct: 200 AYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKYPGTDGAKQAQKR 259
Query: 270 V 270
+
Sbjct: 260 L 260
>gi|22126929|ref|NP_670352.1| tol-pal system protein YbgF [Yersinia pestis KIM 10]
gi|45440864|ref|NP_992403.1| tol-pal system protein YbgF [Yersinia pestis biovar Microtus str.
91001]
gi|51595505|ref|YP_069696.1| tol-pal system protein YbgF [Yersinia pseudotuberculosis IP 32953]
gi|108806601|ref|YP_650517.1| tol-pal system protein YbgF [Yersinia pestis Antiqua]
gi|108813032|ref|YP_648799.1| tol-pal system protein YbgF [Yersinia pestis Nepal516]
gi|145599835|ref|YP_001163911.1| tol-pal system protein YbgF [Yersinia pestis Pestoides F]
gi|153950529|ref|YP_001401829.1| tol-pal system protein YbgF [Yersinia pseudotuberculosis IP 31758]
gi|162419419|ref|YP_001605924.1| tol-pal system protein YbgF [Yersinia pestis Angola]
gi|166211659|ref|ZP_02237694.1| tol-pal system protein YbgF [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167399977|ref|ZP_02305495.1| tol-pal system protein YbgF [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167424105|ref|ZP_02315858.1| tol-pal system protein YbgF [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|170025176|ref|YP_001721681.1| tol-pal system protein YbgF [Yersinia pseudotuberculosis YPIII]
gi|186894558|ref|YP_001871670.1| tol-pal system protein YbgF [Yersinia pseudotuberculosis PB1/+]
gi|229894004|ref|ZP_04509190.1| SecB-dependent secretory protein [Yersinia pestis Pestoides A]
gi|229903472|ref|ZP_04518585.1| SecB-dependent secretory protein [Yersinia pestis Nepal516]
gi|270487252|ref|ZP_06204326.1| tol-pal system protein YbgF [Yersinia pestis KIM D27]
gi|21959968|gb|AAM86603.1|AE013906_7 hypothetical protein y3053 [Yersinia pestis KIM 10]
gi|45435722|gb|AAS61280.1| conserved hypothetical protein [Yersinia pestis biovar Microtus
str. 91001]
gi|51588787|emb|CAH20401.1| conserved putative exported protein [Yersinia pseudotuberculosis IP
32953]
gi|108776680|gb|ABG19199.1| hypothetical protein YPN_2872 [Yersinia pestis Nepal516]
gi|108778514|gb|ABG12572.1| hypothetical protein YPA_0604 [Yersinia pestis Antiqua]
gi|145211531|gb|ABP40938.1| hypothetical protein YPDSF_2570 [Yersinia pestis Pestoides F]
gi|152962024|gb|ABS49485.1| tol-pal system protein YbgF [Yersinia pseudotuberculosis IP 31758]
gi|162352234|gb|ABX86182.1| tol-pal system protein YbgF [Yersinia pestis Angola]
gi|166207430|gb|EDR51910.1| tol-pal system protein YbgF [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167050685|gb|EDR62093.1| tol-pal system protein YbgF [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167056954|gb|EDR66717.1| tol-pal system protein YbgF [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|169751710|gb|ACA69228.1| tol-pal system protein YbgF [Yersinia pseudotuberculosis YPIII]
gi|186697584|gb|ACC88213.1| tol-pal system protein YbgF [Yersinia pseudotuberculosis PB1/+]
gi|229679242|gb|EEO75345.1| SecB-dependent secretory protein [Yersinia pestis Nepal516]
gi|229703889|gb|EEO90902.1| SecB-dependent secretory protein [Yersinia pestis Pestoides A]
gi|270335756|gb|EFA46533.1| tol-pal system protein YbgF [Yersinia pestis KIM D27]
gi|320014266|gb|ADV97837.1| SecB-dependent secretory protein [Yersinia pestis biovar Medievalis
str. Harbin 35]
Length = 269
Score = 52.9 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
++ +Y AI FQ + Y + + A L + Y D+A +++ + YP+
Sbjct: 161 EKKQYDQAITAFQSFVKQYPKSTYQPNANYWLGQLYYNKGKKDDAAYYYAVVVKNYPKSP 220
Query: 262 WARYVETLVK 271
+ E + K
Sbjct: 221 --KSSEAMFK 228
Score = 52.1 bits (122), Expect = 8e-05, Method: Composition-based stats.
Identities = 19/120 (15%), Positives = 44/120 (36%), Gaps = 14/120 (11%)
Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
+++ + V++Y S Y A +++ K+ A
Sbjct: 161 EKKQYDQAITAFQSFVKQYPKSTYQPNANYWLGQLYYNKGKKD--------------DAA 206
Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
+ +V+ NY + + EAM ++ D+A+ V + ++YP A+ + +
Sbjct: 207 YYYAVVVKNYPKSPKSSEAMFKVGVIMQDKGQSDKAKAVYQQVIKQYPNTDAAKQAQKRL 266
>gi|331672264|ref|ZP_08373055.1| putative tol-pal system protein YbgF [Escherichia coli TA280]
gi|331070459|gb|EGI41823.1| putative tol-pal system protein YbgF [Escherichia coli TA280]
Length = 263
Score = 52.5 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 27/79 (34%), Gaps = 2/79 (2%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ A+ FQ + NY D+ + A L + D+A +
Sbjct: 146 YNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDDAAYYFAS 205
Query: 253 IQERYPQGYWARYVETLVK 271
+ + YP+ + + + K
Sbjct: 206 VVKNYPKSP--KAADAMFK 222
Score = 50.2 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/121 (15%), Positives = 41/121 (33%), Gaps = 14/121 (11%)
Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
D+ + ++ Y +S Y+ A +++ K+ A
Sbjct: 154 QDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKD--------------DA 199
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
F V+ NY + A +AM ++ +A+ V + +YP A+ +
Sbjct: 200 AYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDSAKAKAVYQQVISKYPGTDGAKQAQKR 259
Query: 270 V 270
+
Sbjct: 260 L 260
>gi|238756014|ref|ZP_04617338.1| hypothetical protein yruck0001_31450 [Yersinia ruckeri ATCC 29473]
gi|238705739|gb|EEP98132.1| hypothetical protein yruck0001_31450 [Yersinia ruckeri ATCC 29473]
Length = 259
Score = 52.5 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 18/120 (15%), Positives = 44/120 (36%), Gaps = 14/120 (11%)
Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
+++ + V++Y S Y A +++ K+ A
Sbjct: 151 EKKQYDQAITAFQGFVKQYPKSTYQPNANYWLGQLYYNKGKKD--------------DAA 196
Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
+ +V+ NY + + +AM ++ D+A+ V + ++YP A+ + +
Sbjct: 197 YYYAVVVKNYPKSPKSADAMYKVGVIMQEKGQGDKAKAVYQQVIKQYPNTETAKQAQKRL 256
>gi|218704069|ref|YP_002411588.1| tol-pal system protein YbgF [Escherichia coli UMN026]
gi|293403997|ref|ZP_06647991.1| hypothetical protein ECGG_02377 [Escherichia coli FVEC1412]
gi|298379777|ref|ZP_06989382.1| hypothetical protein ECFG_02574 [Escherichia coli FVEC1302]
gi|300900749|ref|ZP_07118898.1| tol-pal system protein YbgF [Escherichia coli MS 198-1]
gi|218431166|emb|CAR12042.1| putative RNA binding protein [Escherichia coli UMN026]
gi|291428583|gb|EFF01608.1| hypothetical protein ECGG_02377 [Escherichia coli FVEC1412]
gi|298279475|gb|EFI20983.1| hypothetical protein ECFG_02574 [Escherichia coli FVEC1302]
gi|300355808|gb|EFJ71678.1| tol-pal system protein YbgF [Escherichia coli MS 198-1]
Length = 263
Score = 52.5 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 27/79 (34%), Gaps = 2/79 (2%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ A+ FQ + NY D+ + A L + D+A +
Sbjct: 146 YNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDDAAYYFAS 205
Query: 253 IQERYPQGYWARYVETLVK 271
+ + YP+ + + + K
Sbjct: 206 VVKNYPKSP--KAADAMFK 222
Score = 50.2 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/121 (15%), Positives = 41/121 (33%), Gaps = 14/121 (11%)
Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
D+ + ++ Y +S Y+ A +++ K+ A
Sbjct: 154 QDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKD--------------DA 199
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
F V+ NY + A +AM ++ +A+ V + +YP A+ +
Sbjct: 200 AYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKYPGTDGAKQAQKR 259
Query: 270 V 270
+
Sbjct: 260 L 260
>gi|218699114|ref|YP_002406743.1| tol-pal system protein YbgF [Escherichia coli IAI39]
gi|293409126|ref|ZP_06652702.1| conserved hypothetical protein [Escherichia coli B354]
gi|293414027|ref|ZP_06656676.1| hypothetical protein ECDG_00576 [Escherichia coli B185]
gi|331651750|ref|ZP_08352769.1| putative tol-pal system protein YbgF [Escherichia coli M718]
gi|218369100|emb|CAR16854.1| putative RNA binding protein [Escherichia coli IAI39]
gi|291434085|gb|EFF07058.1| hypothetical protein ECDG_00576 [Escherichia coli B185]
gi|291469594|gb|EFF12078.1| conserved hypothetical protein [Escherichia coli B354]
gi|331050028|gb|EGI22086.1| putative tol-pal system protein YbgF [Escherichia coli M718]
Length = 263
Score = 52.5 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 27/79 (34%), Gaps = 2/79 (2%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ A+ FQ + NY D+ + A L + D+A +
Sbjct: 146 YNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDDAAYYFAS 205
Query: 253 IQERYPQGYWARYVETLVK 271
+ + YP+ + + + K
Sbjct: 206 VVKNYPKSP--KAADAMFK 222
Score = 50.2 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/121 (15%), Positives = 41/121 (33%), Gaps = 14/121 (11%)
Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
D+ + ++ Y +S Y+ A +++ K+ A
Sbjct: 154 QDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKD--------------DA 199
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
F V+ NY + A +AM ++ +A+ V + +YP A+ +
Sbjct: 200 AYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKYPGTDGAKQAQKR 259
Query: 270 V 270
+
Sbjct: 260 L 260
>gi|261380689|ref|ZP_05985262.1| putative periplasmic protein [Neisseria subflava NJ9703]
gi|284796400|gb|EFC51747.1| putative periplasmic protein [Neisseria subflava NJ9703]
Length = 251
Score = 52.5 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 12/81 (14%), Positives = 27/81 (33%)
Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
+ + + G + I + ++ A +AM + + L D AR
Sbjct: 169 RNMYLLLQSQQRLGNCESVIEIGNRYANRFRNSPQAPDAMYSIGQCQYKLQQKDIARSTW 228
Query: 251 SLIQERYPQGYWARYVETLVK 271
+ + +P A+ +K
Sbjct: 229 RKLIQSFPNSEAAKRASISLK 249
>gi|332097655|gb|EGJ02630.1| tol-pal system protein YbgF [Shigella boydii 3594-74]
gi|333007347|gb|EGK26827.1| tol-pal system protein YbgF [Shigella flexneri VA-6]
gi|333010139|gb|EGK29574.1| tol-pal system protein YbgF [Shigella flexneri K-272]
gi|333021091|gb|EGK40348.1| tol-pal system protein YbgF [Shigella flexneri K-227]
Length = 254
Score = 52.5 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 27/79 (34%), Gaps = 2/79 (2%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ A+ FQ + NY D+ + A L + D+A +
Sbjct: 137 YNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDDAAYYFAS 196
Query: 253 IQERYPQGYWARYVETLVK 271
+ + YP+ + + + K
Sbjct: 197 VVKNYPKSP--KAADAMFK 213
Score = 50.2 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/121 (15%), Positives = 41/121 (33%), Gaps = 14/121 (11%)
Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
D+ + ++ Y +S Y+ A +++ K+ A
Sbjct: 145 QDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKD--------------DA 190
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
F V+ NY + A +AM ++ +A+ V + +YP A+ +
Sbjct: 191 AYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKYPGTDGAKQAQKR 250
Query: 270 V 270
+
Sbjct: 251 L 251
>gi|300957691|ref|ZP_07169880.1| tol-pal system protein YbgF [Escherichia coli MS 175-1]
gi|300315609|gb|EFJ65393.1| tol-pal system protein YbgF [Escherichia coli MS 175-1]
Length = 263
Score = 52.5 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 27/79 (34%), Gaps = 2/79 (2%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ A+ FQ + NY D+ + A L + D+A +
Sbjct: 146 YNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDDAAYYFAS 205
Query: 253 IQERYPQGYWARYVETLVK 271
+ + YP+ + + + K
Sbjct: 206 VVKNYPKSP--KAADAMFK 222
Score = 50.2 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/121 (15%), Positives = 41/121 (33%), Gaps = 14/121 (11%)
Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
D+ + ++ Y +S Y+ A +++ K+ A
Sbjct: 154 QDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKD--------------DA 199
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
F V+ NY + A +AM ++ +A+ V + +YP A+ +
Sbjct: 200 AYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKYPGTDGAKQAQKR 259
Query: 270 V 270
+
Sbjct: 260 L 260
>gi|16128717|ref|NP_415270.1| periplasmic TolA-binding protein [Escherichia coli str. K-12
substr. MG1655]
gi|89107600|ref|AP_001380.1| hypothetical protein [Escherichia coli str. K-12 substr. W3110]
gi|170080409|ref|YP_001729729.1| hypothetical protein ECDH10B_0809 [Escherichia coli str. K-12
substr. DH10B]
gi|238900007|ref|YP_002925803.1| hypothetical protein BWG_0601 [Escherichia coli BW2952]
gi|256023655|ref|ZP_05437520.1| tol-pal system protein YbgF [Escherichia sp. 4_1_40B]
gi|300947177|ref|ZP_07161387.1| tol-pal system protein YbgF [Escherichia coli MS 116-1]
gi|301648047|ref|ZP_07247814.1| tol-pal system protein YbgF [Escherichia coli MS 146-1]
gi|307137355|ref|ZP_07496711.1| tol-pal system protein YbgF [Escherichia coli H736]
gi|331641243|ref|ZP_08342378.1| putative tol-pal system protein YbgF [Escherichia coli H736]
gi|2506623|sp|P45955|YBGF_ECOLI RecName: Full=Uncharacterized protein YbgF; Flags: Precursor
gi|1786963|gb|AAC73836.1| periplasmic TolA-binding protein [Escherichia coli str. K-12
substr. MG1655]
gi|4062322|dbj|BAA35408.1| hypothetical protein [Escherichia coli str. K12 substr. W3110]
gi|169888244|gb|ACB01951.1| predicted protein [Escherichia coli str. K-12 substr. DH10B]
gi|238862957|gb|ACR64955.1| predicted protein [Escherichia coli BW2952]
gi|260450104|gb|ACX40526.1| tol-pal system protein YbgF [Escherichia coli DH1]
gi|300453163|gb|EFK16783.1| tol-pal system protein YbgF [Escherichia coli MS 116-1]
gi|301073873|gb|EFK88679.1| tol-pal system protein YbgF [Escherichia coli MS 146-1]
gi|315135399|dbj|BAJ42558.1| tol-pal system protein YbgF [Escherichia coli DH1]
gi|315614618|gb|EFU95260.1| tol-pal system protein YbgF [Escherichia coli 3431]
gi|323942965|gb|EGB39129.1| tol-pal system protein YbgF [Escherichia coli E482]
gi|323972029|gb|EGB67249.1| tol-pal system protein YbgF [Escherichia coli TA007]
gi|331038041|gb|EGI10261.1| putative tol-pal system protein YbgF [Escherichia coli H736]
Length = 263
Score = 52.5 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 27/79 (34%), Gaps = 2/79 (2%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ A+ FQ + NY D+ + A L + D+A +
Sbjct: 146 YNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDDAAYYFAS 205
Query: 253 IQERYPQGYWARYVETLVK 271
+ + YP+ + + + K
Sbjct: 206 VVKNYPKSP--KAADAMFK 222
Score = 50.2 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/121 (15%), Positives = 41/121 (33%), Gaps = 14/121 (11%)
Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
D+ + ++ Y +S Y+ A +++ K+ A
Sbjct: 154 QDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKD--------------DA 199
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
F V+ NY + A +AM ++ +A+ V + +YP A+ +
Sbjct: 200 AYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKYPGTDGAKQAQKR 259
Query: 270 V 270
+
Sbjct: 260 L 260
>gi|315287178|gb|EFU46590.1| tol-pal system protein YbgF [Escherichia coli MS 110-3]
Length = 233
Score = 52.5 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 27/79 (34%), Gaps = 2/79 (2%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ A+ FQ + NY D+ + A L + D+A +
Sbjct: 116 YNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDDAAYYFAS 175
Query: 253 IQERYPQGYWARYVETLVK 271
+ + YP+ + + + K
Sbjct: 176 VVKNYPKSP--KAADAMFK 192
Score = 50.2 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/121 (15%), Positives = 41/121 (33%), Gaps = 14/121 (11%)
Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
D+ + ++ Y +S Y+ A +++ K+ A
Sbjct: 124 QDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKD--------------DA 169
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
F V+ NY + A +AM ++ +A+ V + +YP A+ +
Sbjct: 170 AYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKYPGTDGAKQAQKR 229
Query: 270 V 270
+
Sbjct: 230 L 230
>gi|323967345|gb|EGB62766.1| tol-pal system protein YbgF [Escherichia coli M863]
gi|327254431|gb|EGE66053.1| tol-pal system protein YbgF [Escherichia coli STEC_7v]
Length = 263
Score = 52.5 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 27/79 (34%), Gaps = 2/79 (2%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ A+ FQ + NY D+ + A L + D+A +
Sbjct: 146 YNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDDAAYYFAS 205
Query: 253 IQERYPQGYWARYVETLVK 271
+ + YP+ + + + K
Sbjct: 206 VVKNYPKSP--KAADAMFK 222
Score = 51.3 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/121 (15%), Positives = 41/121 (33%), Gaps = 14/121 (11%)
Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
D+ + ++ Y +S Y+ A +++ K+ A
Sbjct: 154 QDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKD--------------DA 199
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
F V+ NY + A +AM ++ +A+ V + +YP A+ +
Sbjct: 200 AYYFASVVKNYPKSPKAADAMFKVGVIMQEKGDTAKAKAVYQQVISKYPGTDGAKQAQKR 259
Query: 270 V 270
+
Sbjct: 260 L 260
>gi|82543169|ref|YP_407116.1| tol-pal system protein YbgF [Shigella boydii Sb227]
gi|81244580|gb|ABB65288.1| conserved hypothetical protein [Shigella boydii Sb227]
gi|332760889|gb|EGJ91177.1| tol-pal system protein YbgF [Shigella flexneri 4343-70]
gi|333007800|gb|EGK27276.1| tol-pal system protein YbgF [Shigella flexneri K-218]
Length = 263
Score = 52.5 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 27/79 (34%), Gaps = 2/79 (2%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ A+ FQ + NY D+ + A L + D+A +
Sbjct: 146 YNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDDAAYYFAS 205
Query: 253 IQERYPQGYWARYVETLVK 271
+ + YP+ + + + K
Sbjct: 206 VVKNYPKSP--KAADAMFK 222
Score = 50.2 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/121 (15%), Positives = 41/121 (33%), Gaps = 14/121 (11%)
Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
D+ + ++ Y +S Y+ A +++ K+ A
Sbjct: 154 QDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKD--------------DA 199
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
F V+ NY + A +AM ++ +A+ V + +YP A+ +
Sbjct: 200 AYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKYPGTDGAKQAQKR 259
Query: 270 V 270
+
Sbjct: 260 L 260
>gi|82776020|ref|YP_402367.1| tol-pal system protein YbgF [Shigella dysenteriae Sd197]
gi|309786421|ref|ZP_07681047.1| tol-pal system protein YbgF [Shigella dysenteriae 1617]
gi|81240168|gb|ABB60878.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
gi|308925815|gb|EFP71296.1| tol-pal system protein YbgF [Shigella dysenteriae 1617]
Length = 263
Score = 52.5 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 27/79 (34%), Gaps = 2/79 (2%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ A+ FQ + NY D+ + A L + D+A +
Sbjct: 146 YNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDDAAYYFAS 205
Query: 253 IQERYPQGYWARYVETLVK 271
+ + YP+ + + + K
Sbjct: 206 VVKNYPKSP--KAADAMFK 222
Score = 50.2 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/121 (15%), Positives = 41/121 (33%), Gaps = 14/121 (11%)
Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
D+ + ++ Y +S Y+ A +++ K+ A
Sbjct: 154 QDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKD--------------DA 199
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
F V+ NY + A +AM ++ +A+ V + +YP A+ +
Sbjct: 200 AYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKYPGTDGAKQAQKR 259
Query: 270 V 270
+
Sbjct: 260 L 260
>gi|15800458|ref|NP_286470.1| tol-pal system protein YbgF [Escherichia coli O157:H7 EDL933]
gi|15830031|ref|NP_308804.1| tol-pal system protein YbgF [Escherichia coli O157:H7 str. Sakai]
gi|168759043|ref|ZP_02784050.1| tol-pal system protein YbgF [Escherichia coli O157:H7 str. EC4401]
gi|168767194|ref|ZP_02792201.1| tol-pal system protein YbgF [Escherichia coli O157:H7 str. EC4486]
gi|168779237|ref|ZP_02804244.1| tol-pal system protein YbgF [Escherichia coli O157:H7 str. EC4076]
gi|168786908|ref|ZP_02811915.1| tol-pal system protein YbgF [Escherichia coli O157:H7 str. EC869]
gi|195936737|ref|ZP_03082119.1| hypothetical protein EscherichcoliO157_09785 [Escherichia coli
O157:H7 str. EC4024]
gi|208808005|ref|ZP_03250342.1| tol-pal system protein YbgF [Escherichia coli O157:H7 str. EC4206]
gi|208816398|ref|ZP_03257577.1| tol-pal system protein YbgF [Escherichia coli O157:H7 str. EC4045]
gi|208822278|ref|ZP_03262597.1| tol-pal system protein YbgF [Escherichia coli O157:H7 str. EC4042]
gi|209395711|ref|YP_002269376.1| tol-pal system protein YbgF [Escherichia coli O157:H7 str. EC4115]
gi|217325865|ref|ZP_03441949.1| tol-pal system protein YbgF [Escherichia coli O157:H7 str. TW14588]
gi|254791899|ref|YP_003076736.1| tol-pal system protein YbgF [Escherichia coli O157:H7 str. TW14359]
gi|261224453|ref|ZP_05938734.1| SecB-dependent secretory protein [Escherichia coli O157:H7 str.
FRIK2000]
gi|261254555|ref|ZP_05947088.1| SecB-dependent secretory protein [Escherichia coli O157:H7 str.
FRIK966]
gi|291281685|ref|YP_003498503.1| Tol-pal system protein YbgF [Escherichia coli O55:H7 str. CB9615]
gi|12513675|gb|AAG55078.1|AE005252_14 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
gi|13360236|dbj|BAB34200.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
gi|189003102|gb|EDU72088.1| tol-pal system protein YbgF [Escherichia coli O157:H7 str. EC4076]
gi|189354291|gb|EDU72710.1| tol-pal system protein YbgF [Escherichia coli O157:H7 str. EC4401]
gi|189363451|gb|EDU81870.1| tol-pal system protein YbgF [Escherichia coli O157:H7 str. EC4486]
gi|189373185|gb|EDU91601.1| tol-pal system protein YbgF [Escherichia coli O157:H7 str. EC869]
gi|208727806|gb|EDZ77407.1| tol-pal system protein YbgF [Escherichia coli O157:H7 str. EC4206]
gi|208733046|gb|EDZ81734.1| tol-pal system protein YbgF [Escherichia coli O157:H7 str. EC4045]
gi|208737763|gb|EDZ85446.1| tol-pal system protein YbgF [Escherichia coli O157:H7 str. EC4042]
gi|209157111|gb|ACI34544.1| tol-pal system protein YbgF [Escherichia coli O157:H7 str. EC4115]
gi|209776368|gb|ACI86496.1| hypothetical protein ECs0777 [Escherichia coli]
gi|209776370|gb|ACI86497.1| hypothetical protein ECs0777 [Escherichia coli]
gi|209776372|gb|ACI86498.1| hypothetical protein ECs0777 [Escherichia coli]
gi|209776374|gb|ACI86499.1| hypothetical protein ECs0777 [Escherichia coli]
gi|209776376|gb|ACI86500.1| hypothetical protein ECs0777 [Escherichia coli]
gi|217322086|gb|EEC30510.1| tol-pal system protein YbgF [Escherichia coli O157:H7 str. TW14588]
gi|254591299|gb|ACT70660.1| SecB-dependent secretory protein [Escherichia coli O157:H7 str.
TW14359]
gi|290761558|gb|ADD55519.1| Tol-pal system protein YbgF [Escherichia coli O55:H7 str. CB9615]
gi|320193147|gb|EFW67787.1| tol-pal system protein YbgF [Escherichia coli O157:H7 str. EC1212]
gi|320638000|gb|EFX07769.1| tol-pal system protein YbgF [Escherichia coli O157:H7 str. G5101]
gi|320643396|gb|EFX12576.1| tol-pal system protein YbgF [Escherichia coli O157:H- str. 493-89]
gi|320648690|gb|EFX17326.1| tol-pal system protein YbgF [Escherichia coli O157:H- str. H 2687]
gi|320654328|gb|EFX22381.1| tol-pal system protein YbgF [Escherichia coli O55:H7 str. 3256-97
TW 07815]
gi|320659960|gb|EFX27502.1| tol-pal system protein YbgF [Escherichia coli O55:H7 str. USDA
5905]
gi|320664786|gb|EFX31924.1| tol-pal system protein YbgF [Escherichia coli O157:H7 str. LSU-61]
gi|326341509|gb|EGD65299.1| tol-pal system protein YbgF [Escherichia coli O157:H7 str. 1044]
gi|326345728|gb|EGD69467.1| tol-pal system protein YbgF [Escherichia coli O157:H7 str. 1125]
Length = 263
Score = 52.5 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 27/79 (34%), Gaps = 2/79 (2%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ A+ FQ + NY D+ + A L + D+A +
Sbjct: 146 YNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDDAAYYFAS 205
Query: 253 IQERYPQGYWARYVETLVK 271
+ + YP+ + + + K
Sbjct: 206 VVKNYPKSP--KAADAMFK 222
Score = 50.2 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/121 (15%), Positives = 41/121 (33%), Gaps = 14/121 (11%)
Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
D+ + ++ Y +S Y+ A +++ K+ A
Sbjct: 154 QDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKD--------------DA 199
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
F V+ NY + A +AM ++ +A+ V + +YP A+ +
Sbjct: 200 AYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKYPGTDGAKQAQKR 259
Query: 270 V 270
+
Sbjct: 260 L 260
>gi|313649615|gb|EFS14039.1| tol-pal system protein YbgF [Shigella flexneri 2a str. 2457T]
gi|332761239|gb|EGJ91525.1| tol-pal system protein YbgF [Shigella flexneri 2747-71]
gi|333021411|gb|EGK40661.1| tol-pal system protein YbgF [Shigella flexneri K-304]
Length = 254
Score = 52.5 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 27/79 (34%), Gaps = 2/79 (2%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ A+ FQ + NY D+ + A L + D+A +
Sbjct: 137 YNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDDAAYYFAS 196
Query: 253 IQERYPQGYWARYVETLVK 271
+ + YP+ + + + K
Sbjct: 197 VVKNYPKSP--KAADAMFK 213
Score = 50.2 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/121 (15%), Positives = 41/121 (33%), Gaps = 14/121 (11%)
Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
D+ + ++ Y +S Y+ A +++ K+ A
Sbjct: 145 QDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKD--------------DA 190
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
F V+ NY + A +AM ++ +A+ V + +YP A+ +
Sbjct: 191 AYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKYPGTDGAKQAQKR 250
Query: 270 V 270
+
Sbjct: 251 L 251
>gi|300937785|ref|ZP_07152582.1| tol-pal system protein YbgF [Escherichia coli MS 21-1]
gi|300457196|gb|EFK20689.1| tol-pal system protein YbgF [Escherichia coli MS 21-1]
Length = 263
Score = 52.5 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 26/79 (32%), Gaps = 2/79 (2%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ A+ FQ + NY D+ A L + D+A +
Sbjct: 146 YNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTFLPNANYWLGQLNYNKGKKDDAAYYFAS 205
Query: 253 IQERYPQGYWARYVETLVK 271
+ + YP+ + + + K
Sbjct: 206 VVKNYPKSP--KAADAMFK 222
Score = 48.6 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 18/121 (14%), Positives = 41/121 (33%), Gaps = 14/121 (11%)
Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
D+ + ++ Y +S ++ A +++ K+ A
Sbjct: 154 QDKSRQDDAMVAFQNFIKNYPDSTFLPNANYWLGQLNYNKGKKD--------------DA 199
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
F V+ NY + A +AM ++ +A+ V + +YP A+ +
Sbjct: 200 AYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKYPGTDGAKQAQKR 259
Query: 270 V 270
+
Sbjct: 260 L 260
>gi|323976277|gb|EGB71367.1| tol-pal system protein YbgF [Escherichia coli TW10509]
Length = 263
Score = 52.5 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 27/79 (34%), Gaps = 2/79 (2%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ A+ FQ + NY D+ + A L + D+A +
Sbjct: 146 YNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDDAAYYFAS 205
Query: 253 IQERYPQGYWARYVETLVK 271
+ + YP+ + + + K
Sbjct: 206 VVKNYPKSP--KAADAMFK 222
Score = 50.2 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/121 (15%), Positives = 41/121 (33%), Gaps = 14/121 (11%)
Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
D+ + ++ Y +S Y+ A +++ K+ A
Sbjct: 154 QDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKD--------------DA 199
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
F V+ NY + A +AM ++ +A+ V + +YP A+ +
Sbjct: 200 AYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKYPGTDGAKQAQKR 259
Query: 270 V 270
+
Sbjct: 260 L 260
>gi|324010379|gb|EGB79598.1| tol-pal system protein YbgF [Escherichia coli MS 60-1]
Length = 244
Score = 52.5 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 27/79 (34%), Gaps = 2/79 (2%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ A+ FQ + NY D+ + A L + D+A +
Sbjct: 127 YNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDDAAYYFAS 186
Query: 253 IQERYPQGYWARYVETLVK 271
+ + YP+ + + + K
Sbjct: 187 VVKNYPKSP--KAADAMFK 203
Score = 50.2 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/121 (15%), Positives = 41/121 (33%), Gaps = 14/121 (11%)
Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
D+ + ++ Y +S Y+ A +++ K+ A
Sbjct: 135 QDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKD--------------DA 180
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
F V+ NY + A +AM ++ +A+ V + +YP A+ +
Sbjct: 181 AYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKYPGTDGAKQAQKR 240
Query: 270 V 270
+
Sbjct: 241 L 241
>gi|218778835|ref|YP_002430153.1| tol-pal system protein YbgF [Desulfatibacillum alkenivorans AK-01]
gi|218760219|gb|ACL02685.1| tol-pal system protein YbgF [Desulfatibacillum alkenivorans AK-01]
Length = 276
Score = 52.5 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 28/247 (11%), Positives = 64/247 (25%), Gaps = 2/247 (0%)
Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVL-FLKEQNFSKAYEYFNQC 83
T F L G +++ A + EQ + +
Sbjct: 13 TCFVVALAFTLAGCSWFDWLKQDNTDPRLEDAHKKLDAIATNTDIAEQQLHSVNKRLSAI 72
Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
+ ++ + A Q + + + + +
Sbjct: 73 EQRLLNMEGQMGNMSIMMESISLAPSEIQQQAGYSQDVEDDYLTAP-EVQKPPAPAPEPP 131
Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
+ Y+ + A + + IG Y +
Sbjct: 132 KTASSSLISPEEQYAGAYLHYQNREQDKAIRAFKAFLADNPDHDLADNAQYWIGEAYYDQ 191
Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
Y AI F+ V+ Y D A A+ ++ +Y+A+ ++A + + + YP
Sbjct: 192 KMYPEAIEAFKQVVKKYPDQNKAPAALLKIGYSYLAVDNPEQASKFLRQVVTDYPFSDLV 251
Query: 264 RYVETLV 270
+ +
Sbjct: 252 NKAQNKL 258
>gi|74311266|ref|YP_309685.1| tol-pal system protein YbgF [Shigella sonnei Ss046]
gi|157158211|ref|YP_001461903.1| tol-pal system protein YbgF [Escherichia coli E24377A]
gi|157160224|ref|YP_001457542.1| tol-pal system protein YbgF [Escherichia coli HS]
gi|170020913|ref|YP_001725867.1| tol-pal system protein YbgF [Escherichia coli ATCC 8739]
gi|187731125|ref|YP_001879399.1| tol-pal system protein YbgF [Shigella boydii CDC 3083-94]
gi|188492028|ref|ZP_02999298.1| tol-pal system protein YbgF [Escherichia coli 53638]
gi|194440228|ref|ZP_03072260.1| tol-pal system protein YbgF [Escherichia coli 101-1]
gi|209917993|ref|YP_002292077.1| tol-pal system protein YbgF [Escherichia coli SE11]
gi|218553269|ref|YP_002386182.1| tol-pal system protein YbgF [Escherichia coli IAI1]
gi|218694166|ref|YP_002401833.1| tol-pal system protein YbgF [Escherichia coli 55989]
gi|253774287|ref|YP_003037118.1| tol-pal system protein YbgF [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|254160812|ref|YP_003043920.1| tol-pal system protein YbgF [Escherichia coli B str. REL606]
gi|256021182|ref|ZP_05435047.1| tol-pal system protein YbgF [Shigella sp. D9]
gi|260842948|ref|YP_003220726.1| hypothetical protein ECO103_0737 [Escherichia coli O103:H2 str.
12009]
gi|260853977|ref|YP_003227868.1| hypothetical protein ECO26_0803 [Escherichia coli O26:H11 str.
11368]
gi|260866873|ref|YP_003233275.1| hypothetical protein ECO111_0759 [Escherichia coli O111:H- str.
11128]
gi|293433010|ref|ZP_06661438.1| hypothetical protein ECCG_01134 [Escherichia coli B088]
gi|297520455|ref|ZP_06938841.1| tol-pal system protein YbgF [Escherichia coli OP50]
gi|300816392|ref|ZP_07096614.1| tol-pal system protein YbgF [Escherichia coli MS 107-1]
gi|300907001|ref|ZP_07124670.1| tol-pal system protein YbgF [Escherichia coli MS 84-1]
gi|300918403|ref|ZP_07135003.1| tol-pal system protein YbgF [Escherichia coli MS 115-1]
gi|300926146|ref|ZP_07141959.1| tol-pal system protein YbgF [Escherichia coli MS 182-1]
gi|300929452|ref|ZP_07144920.1| tol-pal system protein YbgF [Escherichia coli MS 187-1]
gi|301305230|ref|ZP_07211328.1| tol-pal system protein YbgF [Escherichia coli MS 124-1]
gi|301327935|ref|ZP_07221106.1| tol-pal system protein YbgF [Escherichia coli MS 78-1]
gi|307314793|ref|ZP_07594387.1| tol-pal system protein YbgF [Escherichia coli W]
gi|309797457|ref|ZP_07691849.1| tol-pal system protein YbgF [Escherichia coli MS 145-7]
gi|312970821|ref|ZP_07785000.1| tol-pal system protein YbgF [Escherichia coli 1827-70]
gi|331667109|ref|ZP_08367974.1| putative periplasmic protein [Escherichia coli TA271]
gi|331676424|ref|ZP_08377121.1| putative tol-pal system protein YbgF [Escherichia coli H591]
gi|332282409|ref|ZP_08394822.1| tol-pal system protein YbgF [Shigella sp. D9]
gi|73854743|gb|AAZ87450.1| conserved hypothetical protein [Shigella sonnei Ss046]
gi|157065904|gb|ABV05159.1| tol-pal system protein YbgF [Escherichia coli HS]
gi|157080241|gb|ABV19949.1| tol-pal system protein YbgF [Escherichia coli E24377A]
gi|169755841|gb|ACA78540.1| tol-pal system protein YbgF [Escherichia coli ATCC 8739]
gi|187428117|gb|ACD07391.1| tol-pal system protein YbgF [Shigella boydii CDC 3083-94]
gi|188487227|gb|EDU62330.1| tol-pal system protein YbgF [Escherichia coli 53638]
gi|194420837|gb|EDX36892.1| tol-pal system protein YbgF [Escherichia coli 101-1]
gi|209911252|dbj|BAG76326.1| conserved hypothetical protein [Escherichia coli SE11]
gi|218350898|emb|CAU96596.1| putative RNA binding protein [Escherichia coli 55989]
gi|218360037|emb|CAQ97584.1| putative RNA binding protein [Escherichia coli IAI1]
gi|242376504|emb|CAQ31208.1| predicted periplasmic protein, subunit of The Tol-Pal Cell Envelope
Complex, Colicin S4 Transport System and The Colicin A
Import System [Escherichia coli BL21(DE3)]
gi|253325331|gb|ACT29933.1| tol-pal system protein YbgF [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|253972713|gb|ACT38384.1| hypothetical protein ECB_00702 [Escherichia coli B str. REL606]
gi|253976907|gb|ACT42577.1| hypothetical protein ECD_00702 [Escherichia coli BL21(DE3)]
gi|257752626|dbj|BAI24128.1| conserved predicted protein [Escherichia coli O26:H11 str. 11368]
gi|257758095|dbj|BAI29592.1| conserved predicted protein [Escherichia coli O103:H2 str. 12009]
gi|257763229|dbj|BAI34724.1| conserved predicted protein [Escherichia coli O111:H- str. 11128]
gi|291323829|gb|EFE63251.1| hypothetical protein ECCG_01134 [Escherichia coli B088]
gi|300401222|gb|EFJ84760.1| tol-pal system protein YbgF [Escherichia coli MS 84-1]
gi|300414466|gb|EFJ97776.1| tol-pal system protein YbgF [Escherichia coli MS 115-1]
gi|300417845|gb|EFK01156.1| tol-pal system protein YbgF [Escherichia coli MS 182-1]
gi|300462561|gb|EFK26054.1| tol-pal system protein YbgF [Escherichia coli MS 187-1]
gi|300531082|gb|EFK52144.1| tol-pal system protein YbgF [Escherichia coli MS 107-1]
gi|300839542|gb|EFK67302.1| tol-pal system protein YbgF [Escherichia coli MS 124-1]
gi|300845578|gb|EFK73338.1| tol-pal system protein YbgF [Escherichia coli MS 78-1]
gi|306905691|gb|EFN36219.1| tol-pal system protein YbgF [Escherichia coli W]
gi|308118981|gb|EFO56243.1| tol-pal system protein YbgF [Escherichia coli MS 145-7]
gi|309700964|emb|CBJ00261.1| putative tetratricopeptide repeat exported protein [Escherichia
coli ETEC H10407]
gi|310336582|gb|EFQ01749.1| tol-pal system protein YbgF [Escherichia coli 1827-70]
gi|315059985|gb|ADT74312.1| predicted protein [Escherichia coli W]
gi|315257661|gb|EFU37629.1| tol-pal system protein YbgF [Escherichia coli MS 85-1]
gi|320172955|gb|EFW48183.1| tol-pal system protein YbgF [Shigella dysenteriae CDC 74-1112]
gi|320179417|gb|EFW54374.1| tol-pal system protein YbgF [Shigella boydii ATCC 9905]
gi|320183983|gb|EFW58807.1| tol-pal system protein YbgF [Shigella flexneri CDC 796-83]
gi|320198138|gb|EFW72742.1| tol-pal system protein YbgF [Escherichia coli EC4100B]
gi|323153742|gb|EFZ39989.1| tol-pal system protein YbgF [Escherichia coli EPECa14]
gi|323158794|gb|EFZ44807.1| tol-pal system protein YbgF [Escherichia coli E128010]
gi|323163901|gb|EFZ49711.1| tol-pal system protein YbgF [Shigella sonnei 53G]
gi|323180018|gb|EFZ65574.1| tol-pal system protein YbgF [Escherichia coli 1180]
gi|323185097|gb|EFZ70463.1| tol-pal system protein YbgF [Escherichia coli 1357]
gi|323379455|gb|ADX51723.1| tol-pal system protein YbgF [Escherichia coli KO11]
gi|323938281|gb|EGB34539.1| tol-pal system protein YbgF [Escherichia coli E1520]
gi|323946992|gb|EGB43006.1| tol-pal system protein YbgF [Escherichia coli H120]
gi|324116284|gb|EGC10205.1| tol-pal system protein YbgF [Escherichia coli E1167]
gi|331065465|gb|EGI37358.1| putative periplasmic protein [Escherichia coli TA271]
gi|331075917|gb|EGI47214.1| putative tol-pal system protein YbgF [Escherichia coli H591]
gi|332093803|gb|EGI98857.1| tol-pal system protein YbgF [Shigella boydii 5216-82]
gi|332096487|gb|EGJ01483.1| tol-pal system protein YbgF [Shigella dysenteriae 155-74]
gi|332104761|gb|EGJ08107.1| tol-pal system protein YbgF [Shigella sp. D9]
gi|332342079|gb|AEE55413.1| tol-pal system protein YbgF [Escherichia coli UMNK88]
Length = 263
Score = 52.5 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 27/79 (34%), Gaps = 2/79 (2%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ A+ FQ + NY D+ + A L + D+A +
Sbjct: 146 YNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDDAAYYFAS 205
Query: 253 IQERYPQGYWARYVETLVK 271
+ + YP+ + + + K
Sbjct: 206 VVKNYPKSP--KAADAMFK 222
Score = 50.2 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/121 (15%), Positives = 41/121 (33%), Gaps = 14/121 (11%)
Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
D+ + ++ Y +S Y+ A +++ K+ A
Sbjct: 154 QDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKD--------------DA 199
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
F V+ NY + A +AM ++ +A+ V + +YP A+ +
Sbjct: 200 AYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKYPGTDGAKQAQKR 259
Query: 270 V 270
+
Sbjct: 260 L 260
>gi|254448664|ref|ZP_05062122.1| TPR repeat protein [gamma proteobacterium HTCC5015]
gi|198261672|gb|EDY85959.1| TPR repeat protein [gamma proteobacterium HTCC5015]
Length = 277
Score = 52.5 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 15/128 (11%), Positives = 44/128 (34%), Gaps = 14/128 (10%)
Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
+ + ++ ++ Y + + A+++ +
Sbjct: 156 YQAAFDYLREGRHQEAIKAFEGVLNEYPDGQFADNAQYWK--------------AESHYV 201
Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
++ A F+ V+ Y ++ +A +L Y L +++R++++ + E YP
Sbjct: 202 SKQFAEAEAGFKKVIEAYPNSNKVPDAHLKLGYTYYELKQWEQSRKILAQVVENYPTSNA 261
Query: 263 ARYVETLV 270
A +
Sbjct: 262 ANLARKRL 269
Score = 44.0 bits (101), Expect = 0.020, Method: Composition-based stats.
Identities = 22/117 (18%), Positives = 48/117 (41%)
Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
G S + +D +R+ Y+ A +L+E +A + F ++P A
Sbjct: 131 TGNSTTPSDTAEKTAPSDPAAERKAYQAAFDYLREGRHQEAIKAFEGVLNEYPDGQFADN 190
Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
+ A Y + ++ +A + ++ I YP S V + +G +Y ++ + +
Sbjct: 191 AQYWKAESHYVSKQFAEAEAGFKKVIEAYPNSNKVPDAHLKLGYTYYELKQWEQSRK 247
Score = 41.7 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 21/90 (23%), Positives = 30/90 (33%)
Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
NS K + YL+ G + AI F+ VL Y D + A+ A
Sbjct: 133 NSTTPSDTAEKTAPSDPAAERKAYQAAFDYLREGRHQEAIKAFEGVLNEYPDGQFADNAQ 192
Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQG 260
E++ EA + E YP
Sbjct: 193 YWKAESHYVSKQFAEAEAGFKKVIEAYPNS 222
>gi|241760457|ref|ZP_04758550.1| periplasmic protein [Neisseria flavescens SK114]
gi|241318961|gb|EER55463.1| periplasmic protein [Neisseria flavescens SK114]
Length = 251
Score = 52.5 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 12/81 (14%), Positives = 27/81 (33%)
Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
+ + + G + I + ++ A +AM + + L D AR
Sbjct: 169 RNMYLLLQSQQRLGNCESVIEIGNRYANRFRNSPQAPDAMYSIGQCQYKLQQKDIARSTW 228
Query: 251 SLIQERYPQGYWARYVETLVK 271
+ + +P A+ +K
Sbjct: 229 RKLIQSFPNSEAAKRASISLK 249
>gi|224539634|ref|ZP_03680173.1| hypothetical protein BACCELL_04542 [Bacteroides cellulosilyticus
DSM 14838]
gi|224518725|gb|EEF87830.1| hypothetical protein BACCELL_04542 [Bacteroides cellulosilyticus
DSM 14838]
Length = 271
Score = 52.5 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 41/266 (15%), Positives = 82/266 (30%), Gaps = 22/266 (8%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
+ +A L + D YE A + + +++A
Sbjct: 1 MKKNILITLLAAVLLSSCGEYNKLLKSTDYEYK-------YEAAKNYFAKGQYNRAATLL 53
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
N+ A +SL M Y+ YQ AA +Y YP + + G +
Sbjct: 54 NELIAILKGTDKAEESLYMLGMSYYNQKDYQTAAQTFVQYFNVYPRGTFTELARFHAGKA 113
Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV-----E 195
+ DQ T +Q + +E + S + A+ + +++L KE
Sbjct: 114 LYLDTPEPRLDQSGTYAAIQQLQMFMEYFPQSSKKEEAQDMIFKLQDKLVMKEYLSAKLY 173
Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM----DEAREVVS 251
Y + + Q L +Y E+ ++ A +A+ A
Sbjct: 174 YNLGNYLGNNYQSCVITAQNALKDYPYTNLREDLSILILRAKYEMAIYSVEDKRAERYRE 233
Query: 252 L------IQERYPQGYWARYVETLVK 271
+ +P+ + + + + K
Sbjct: 234 TVDEYYAFKNEFPESKYMKEADRIFK 259
>gi|238765243|ref|ZP_04626172.1| hypothetical protein ykris0001_32580 [Yersinia kristensenii ATCC
33638]
gi|238696515|gb|EEP89303.1| hypothetical protein ykris0001_32580 [Yersinia kristensenii ATCC
33638]
Length = 260
Score = 52.5 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
++ +Y AI FQ + Y + + A L + Y D+A +++ + YP+
Sbjct: 152 EKKQYDQAITAFQGFVKQYPKSTYQPNANYWLGQLYYNKGKKDDAAYYYAVVVKNYPKSP 211
Query: 262 WARYVETLVK 271
+ E + K
Sbjct: 212 --KSSEAMFK 219
Score = 51.7 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/120 (15%), Positives = 44/120 (36%), Gaps = 14/120 (11%)
Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
+++ + V++Y S Y A +++ K+ A
Sbjct: 152 EKKQYDQAITAFQGFVKQYPKSTYQPNANYWLGQLYYNKGKKD--------------DAA 197
Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
+ +V+ NY + + EAM ++ D+A+ V + ++YP A+ + +
Sbjct: 198 YYYAVVVKNYPKSPKSSEAMFKVGVIMQDKGQSDKAKAVYQQVIKQYPNTDAAKQAQKRL 257
>gi|170682384|ref|YP_001742853.1| tol-pal system protein YbgF [Escherichia coli SMS-3-5]
gi|170520102|gb|ACB18280.1| tol-pal system protein YbgF [Escherichia coli SMS-3-5]
Length = 263
Score = 52.5 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 27/79 (34%), Gaps = 2/79 (2%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ A+ FQ + NY D+ + A L + D+A +
Sbjct: 146 YNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDDAAYYFAS 205
Query: 253 IQERYPQGYWARYVETLVK 271
+ + YP+ + + + K
Sbjct: 206 VVKNYPKSP--KAADAMFK 222
Score = 49.8 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 19/121 (15%), Positives = 41/121 (33%), Gaps = 14/121 (11%)
Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
D+ + ++ Y +S Y+ A +++ K+ A
Sbjct: 154 QDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKD--------------DA 199
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
F V+ NY + A +AM ++ +A+ V + +YP A+ +
Sbjct: 200 AYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKYPGTDGAKQAQKR 259
Query: 270 V 270
+
Sbjct: 260 L 260
>gi|24111982|ref|NP_706492.1| tol-pal system protein YbgF [Shigella flexneri 2a str. 301]
gi|110804632|ref|YP_688152.1| tol-pal system protein YbgF [Shigella flexneri 5 str. 8401]
gi|24050795|gb|AAN42199.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]
gi|110614180|gb|ABF02847.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
Length = 263
Score = 52.5 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 27/79 (34%), Gaps = 2/79 (2%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ A+ FQ + NY D+ + A L + D+A +
Sbjct: 146 YNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDDAAYYFAS 205
Query: 253 IQERYPQGYWARYVETLVK 271
+ + YP+ + + + K
Sbjct: 206 VVKNYPKSP--KAADAMFK 222
Score = 49.8 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 19/121 (15%), Positives = 41/121 (33%), Gaps = 14/121 (11%)
Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
D+ + ++ Y +S Y+ A +++ K+ A
Sbjct: 154 QDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKD--------------DA 199
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
F V+ NY + A +AM ++ +A+ V + +YP A+ +
Sbjct: 200 AYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKYPGTDGAKQAQKR 259
Query: 270 V 270
+
Sbjct: 260 L 260
>gi|30062095|ref|NP_836266.1| tol-pal system protein YbgF [Shigella flexneri 2a str. 2457T]
gi|30040339|gb|AAP16072.1| hypothetical protein S0568 [Shigella flexneri 2a str. 2457T]
gi|281599942|gb|ADA72926.1| putative exported protein [Shigella flexneri 2002017]
gi|332763938|gb|EGJ94176.1| tol-pal system protein YbgF [Shigella flexneri K-671]
gi|332768159|gb|EGJ98344.1| tol-pal system protein YbgF [Shigella flexneri 2930-71]
Length = 263
Score = 52.5 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 27/79 (34%), Gaps = 2/79 (2%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ A+ FQ + NY D+ + A L + D+A +
Sbjct: 146 YNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDDAAYYFAS 205
Query: 253 IQERYPQGYWARYVETLVK 271
+ + YP+ + + + K
Sbjct: 206 VVKNYPKSP--KAADAMFK 222
Score = 49.8 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 19/121 (15%), Positives = 41/121 (33%), Gaps = 14/121 (11%)
Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
D+ + ++ Y +S Y+ A +++ K+ A
Sbjct: 154 QDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKD--------------DA 199
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
F V+ NY + A +AM ++ +A+ V + +YP A+ +
Sbjct: 200 AYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKYPGTDGAKQAQKR 259
Query: 270 V 270
+
Sbjct: 260 L 260
>gi|331662102|ref|ZP_08363025.1| putative periplasmic protein [Escherichia coli TA143]
gi|284920529|emb|CBG33591.1| putative tetratricopeptide repeat exported protein [Escherichia
coli 042]
gi|331060524|gb|EGI32488.1| putative periplasmic protein [Escherichia coli TA143]
Length = 263
Score = 52.5 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 27/79 (34%), Gaps = 2/79 (2%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ A+ FQ + NY D+ + A L + D+A +
Sbjct: 146 YNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDDAAYYFAS 205
Query: 253 IQERYPQGYWARYVETLVK 271
+ + YP+ + + + K
Sbjct: 206 VVKNYPKSP--KAADAMFK 222
Score = 49.8 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 19/121 (15%), Positives = 41/121 (33%), Gaps = 14/121 (11%)
Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
D+ + ++ Y +S Y+ A +++ K+ A
Sbjct: 154 QDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKD--------------DA 199
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
F V+ NY + A +AM ++ +A+ V + +YP A+ +
Sbjct: 200 AYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKYPGTDGAKQAQKR 259
Query: 270 V 270
+
Sbjct: 260 L 260
>gi|323963123|gb|EGB58693.1| tol-pal system protein YbgF [Escherichia coli H489]
Length = 263
Score = 52.1 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 27/79 (34%), Gaps = 2/79 (2%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ A+ FQ + NY D+ + A L + D+A +
Sbjct: 146 YNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDDAAYYFAS 205
Query: 253 IQERYPQGYWARYVETLVK 271
+ + YP+ + + + K
Sbjct: 206 VVKNYPKSP--KAADAMFK 222
Score = 44.4 bits (102), Expect = 0.018, Method: Composition-based stats.
Identities = 18/121 (14%), Positives = 40/121 (33%), Gaps = 14/121 (11%)
Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
D+ + ++ Y +S Y+ A +++ K+ A
Sbjct: 154 QDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKD--------------DA 199
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
F V+ NY + A +AM ++ +A+ V + +Y A+ +
Sbjct: 200 AYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKYLGTDGAKQAQKR 259
Query: 270 V 270
+
Sbjct: 260 L 260
>gi|253687645|ref|YP_003016835.1| tol-pal system protein YbgF [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|251754223|gb|ACT12299.1| tol-pal system protein YbgF [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 258
Score = 52.1 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 19/120 (15%), Positives = 43/120 (35%), Gaps = 14/120 (11%)
Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
+++ + V++Y +S Y A +++ K+ A
Sbjct: 150 EKKQYDQAISAFQAFVKKYPDSTYQPNANYWLGQLNYNKGKKD--------------DAA 195
Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
F V+ NY + + EA+ ++ D+A+ V + + YP A+ + +
Sbjct: 196 YYFANVVKNYPKSPKSSEALLKVGVIMQEKGQADKAKAVYQQVVKMYPNTESAKQAQKRL 255
Score = 50.6 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 16/70 (22%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
++ +Y AI FQ + Y D+ + A L + D+A + + + YP+
Sbjct: 150 EKKQYDQAISAFQAFVKKYPDSTYQPNANYWLGQLNYNKGKKDDAAYYFANVVKNYPKSP 209
Query: 262 WARYVETLVK 271
+ E L+K
Sbjct: 210 --KSSEALLK 217
>gi|227327558|ref|ZP_03831582.1| hypothetical protein PcarcW_09600 [Pectobacterium carotovorum
subsp. carotovorum WPP14]
Length = 258
Score = 52.1 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 19/120 (15%), Positives = 44/120 (36%), Gaps = 14/120 (11%)
Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
+++ + V++Y +S Y A +++ K+ A
Sbjct: 150 EKKQYDQAISAFQAFVKKYPDSTYQPNANYWLGQLNYNKGKKD--------------DAA 195
Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
F V+ NY + + EA+ ++ +D+A+ V + + YP A+ + +
Sbjct: 196 YYFANVVKNYPKSPKSSEALLKVGVIMQEKGQVDKAKAVYQQVVKMYPNTESAKQAQKRL 255
Score = 50.6 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 16/70 (22%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
++ +Y AI FQ + Y D+ + A L + D+A + + + YP+
Sbjct: 150 EKKQYDQAISAFQAFVKKYPDSTYQPNANYWLGQLNYNKGKKDDAAYYFANVVKNYPKSP 209
Query: 262 WARYVETLVK 271
+ E L+K
Sbjct: 210 --KSSEALLK 217
>gi|218549685|ref|YP_002383476.1| tol-pal system protein YbgF [Escherichia fergusonii ATCC 35469]
gi|218357226|emb|CAQ89861.1| putative RNA binding protein [Escherichia fergusonii ATCC 35469]
gi|324114317|gb|EGC08286.1| tol-pal system protein YbgF [Escherichia fergusonii B253]
gi|325498075|gb|EGC95934.1| tol-pal system protein YbgF [Escherichia fergusonii ECD227]
Length = 263
Score = 52.1 bits (122), Expect = 8e-05, Method: Composition-based stats.
Identities = 19/121 (15%), Positives = 42/121 (34%), Gaps = 14/121 (11%)
Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
D+ + +++Y +S Y+ A +++ K+ A
Sbjct: 154 QDKSRQDDAIVAFQNFIKKYPDSTYLPNANYWLGQLNYNKGKKD--------------DA 199
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
F V+ NY + A +AM ++ +A+ V + +YP A+ +
Sbjct: 200 AYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVINKYPGSDGAKQAQKR 259
Query: 270 V 270
+
Sbjct: 260 L 260
Score = 51.3 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 26/79 (32%), Gaps = 2/79 (2%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ AI FQ + Y D+ + A L + D+A +
Sbjct: 146 YNAAIALVQDKSRQDDAIVAFQNFIKKYPDSTYLPNANYWLGQLNYNKGKKDDAAYYFAS 205
Query: 253 IQERYPQGYWARYVETLVK 271
+ + YP+ + + + K
Sbjct: 206 VVKNYPKSP--KAADAMFK 222
>gi|153215113|ref|ZP_01949820.1| conserved hypothetical protein [Vibrio cholerae 1587]
gi|124114904|gb|EAY33724.1| conserved hypothetical protein [Vibrio cholerae 1587]
Length = 214
Score = 52.1 bits (122), Expect = 8e-05, Method: Composition-based stats.
Identities = 44/189 (23%), Positives = 80/189 (42%), Gaps = 10/189 (5%)
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
+PF + + L + Y + E + P + +D+V Y+
Sbjct: 24 RKLEALDSRYPFGAYSEQVQLDLIYAYYKNDDLALGLATIERFTRLNPTHEKMDWVLYMR 83
Query: 138 GMSYAQMIRDVPYD----------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
G+++ R+ +D K ++++RY NSPY + A+ + +N
Sbjct: 84 GLTHMAQDRNFMHDLFNIDRRDRDPEPVKAAFADFKKLLQRYPNSPYAEDAQRRMFALKN 143
Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
+LA ++ +YL+R ++AAI R Q + Y D E A +++A +EAY L L D
Sbjct: 144 RLAEYDLATADFYLRREAWIAAINRTQELQKTYPDTEAARKSLAIQLEAYQQLGLTDAIE 203
Query: 248 EVVSLIQER 256
L+Q
Sbjct: 204 RTKQLMQLN 212
>gi|297181850|gb|ADI18029.1| hypothetical protein [uncultured delta proteobacterium
HF0200_19J16]
Length = 258
Score = 52.1 bits (122), Expect = 8e-05, Method: Composition-based stats.
Identities = 25/256 (9%), Positives = 83/256 (32%), Gaps = 13/256 (5%)
Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTD---VRYQREVYEKAVLFLKEQNFS 74
++++ + + F++G T+ Q+ + ++A+L ++ S
Sbjct: 5 KIFR-SFNLLLICFFFFIIGCTSTGINYTSGQKNTEAIAELKQKVLQQEALLKRMQKMAS 63
Query: 75 KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
N+ + P + ++ + ++ + E+ +T
Sbjct: 64 DQILLSNELEQSIPPQDLLESMQNGFVELRKNTRALEEQIAKLEKDVTAVELKVKQIPKP 123
Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
+ ++ + + + + + + A +
Sbjct: 124 ETKHFDTLRKQENIILGLISLQAGNPDQALVYLQDI---------LKQSDKTPLKAQILM 174
Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
+G +L+ G A + ++L Y++ + A+ L +A LA ++ + + +
Sbjct: 175 SLGNGFLEHGHATQAAYYYGIILREYTETSNVPNALYYLGKAMEELAETEKQNVLWNELI 234
Query: 255 ERYPQGYWARYVETLV 270
+ +P+ A+ +
Sbjct: 235 KNHPKSPLAKRAIKRL 250
>gi|293397220|ref|ZP_06641493.1| conserved hypothetical protein [Serratia odorifera DSM 4582]
gi|291420240|gb|EFE93496.1| conserved hypothetical protein [Serratia odorifera DSM 4582]
Length = 261
Score = 52.1 bits (122), Expect = 8e-05, Method: Composition-based stats.
Identities = 19/120 (15%), Positives = 43/120 (35%), Gaps = 14/120 (11%)
Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
+++ + +++Y S Y A +++ K+ A
Sbjct: 154 EKKQYDQAISAFQGFIKQYPKSTYQPNANYWLGQLFYNKGKKD--------------DAA 199
Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
F +V+ NY + A +AM ++ D+A+ V + ++YP A+ +
Sbjct: 200 YYFAVVVKNYPKSPKAPDAMYKVGIIMQEKGQADKAKAVFQQVIKQYPTSDAAKQANKRI 259
>gi|254433450|ref|ZP_05046958.1| type IV pilus biogenesis/stability protein PilW [Nitrosococcus
oceani AFC27]
gi|207089783|gb|EDZ67054.1| type IV pilus biogenesis/stability protein PilW [Nitrosococcus
oceani AFC27]
Length = 253
Score = 52.1 bits (122), Expect = 8e-05, Method: Composition-based stats.
Identities = 28/253 (11%), Positives = 72/253 (28%), Gaps = 9/253 (3%)
Query: 24 LTIFFSIAVCFLVGWERQ-SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
+ F+I + G SS++ + S+ + + + V + K+ +A + +
Sbjct: 1 MIGVFAIMLLGFAGCASILSSQEQDIPSIDKEKAAKINVQLGVEYFKQGELEQALKKLER 60
Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG-----EEYITQYPESKNVDYVYYLV 137
+ P A +L + A + ++ E Q + +
Sbjct: 61 AIQQDPKLPSAYNALALLKQRLGQAEEAEKYFQRAIKLDPEYSEAQNNYGVFLYNQGHYG 120
Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
+ +L + ++ + +L +
Sbjct: 121 DAEARFLEAVKNPLYGTPELAYENAGMAAQKQVEFDKAERYYRKALQLEPRLPKSLYHMA 180
Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
++G Y A Q A H +++ + L D L++ +
Sbjct: 181 EISFEKGHYQRAQEYLQRYRV---GARHTPKSLWLGIRIERELGNEDTVSSYALLLRRNF 237
Query: 258 PQGYWARYVETLV 270
P A+ ++ +
Sbjct: 238 PDSPEAKLLQKSL 250
>gi|261400856|ref|ZP_05986981.1| putative periplasmic protein [Neisseria lactamica ATCC 23970]
gi|269209327|gb|EEZ75782.1| putative periplasmic protein [Neisseria lactamica ATCC 23970]
Length = 237
Score = 52.1 bits (122), Expect = 8e-05, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 27/70 (38%)
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
+ G + I + D+ A EAM ++ E L D AR + + YP
Sbjct: 166 RMGNCESVIEIGGRYANRFKDSPTAPEAMFKIGECQYRLQQKDIARATWRSLIQTYPGSP 225
Query: 262 WARYVETLVK 271
A+ + ++
Sbjct: 226 AAKRAASAIR 235
>gi|239995971|ref|ZP_04716495.1| Tetratricopeptide TPR_2 [Alteromonas macleodii ATCC 27126]
Length = 264
Score = 52.1 bits (122), Expect = 8e-05, Method: Composition-based stats.
Identities = 19/118 (16%), Positives = 42/118 (35%), Gaps = 14/118 (11%)
Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
R + + R+ NS Y A +++ G+ + ++ A +
Sbjct: 158 REYDKAIPAFQSFISRFPNSGYAPNAHYWL--------------GQLLFNKQQWSEASEQ 203
Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
F +V ++D+ +A+ +L AR++ + YP R E+ +
Sbjct: 204 FNIVANRFTDSSKRPDALLKLGVIAERTGDSSTARQLFQQVVNDYPDSSAKRLAESRL 261
Score = 39.4 bits (89), Expect = 0.62, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 33/79 (41%), Gaps = 2/79 (2%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
LK EY AIP FQ ++ + ++ +A A L + EA E ++
Sbjct: 147 YENAVNLILKSREYDKAIPAFQSFISRFPNSGYAPNAHYWLGQLLFNKQQWSEASEQFNI 206
Query: 253 IQERYPQGYWARYVETLVK 271
+ R+ ++ + L+K
Sbjct: 207 VANRFTDS--SKRPDALLK 223
>gi|297183049|gb|ADI19194.1| hypothetical protein [uncultured delta proteobacterium
HF0130_20J24]
Length = 239
Score = 52.1 bits (122), Expect = 9e-05, Method: Composition-based stats.
Identities = 13/91 (14%), Positives = 34/91 (37%)
Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
A + + +L +G + + L Y + H +A+ L EA
Sbjct: 149 QDILNHKKPTRLKAEILLAVAHSFLAQGYAKQSASHYSTFLREYPKSRHTPKALYYLGEA 208
Query: 237 YVALALMDEAREVVSLIQERYPQGYWARYVE 267
+ L + + +++ + +YP +++ +
Sbjct: 209 MMELGEQKKQKVLLNELINKYPNSPFSKRAK 239
>gi|307130111|ref|YP_003882127.1| SecB-dependent secretory protein [Dickeya dadantii 3937]
gi|306527640|gb|ADM97570.1| SecB-dependent secretory protein [Dickeya dadantii 3937]
Length = 274
Score = 52.1 bits (122), Expect = 9e-05, Method: Composition-based stats.
Identities = 21/120 (17%), Positives = 43/120 (35%), Gaps = 14/120 (11%)
Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
+++ + V++Y +S Y A +++ K+ A
Sbjct: 166 EKKQYDQAIVAFQNFVKKYPDSTYQPNANYWLGQLFYNKGKKD--------------DAA 211
Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
F V+ NY + A EAM ++ D+A+ V + + YP A+ + +
Sbjct: 212 YYFANVVKNYPKSPKASEAMFKVGVIMQEKGQTDKAKAVYQQVVKTYPNTDGAKQAQKRL 271
Score = 49.8 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
++ +Y AI FQ + Y D+ + A L + + D+A + + + YP+
Sbjct: 166 EKKQYDQAIVAFQNFVKKYPDSTYQPNANYWLGQLFYNKGKKDDAAYYFANVVKNYPKSP 225
Query: 262 WARYVETLVK 271
+ E + K
Sbjct: 226 --KASEAMFK 233
>gi|261822328|ref|YP_003260434.1| tol-pal system protein YbgF [Pectobacterium wasabiae WPP163]
gi|261606341|gb|ACX88827.1| tol-pal system protein YbgF [Pectobacterium wasabiae WPP163]
Length = 258
Score = 52.1 bits (122), Expect = 9e-05, Method: Composition-based stats.
Identities = 19/120 (15%), Positives = 43/120 (35%), Gaps = 14/120 (11%)
Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
+++ + V++Y +S Y A +++ K+ A
Sbjct: 150 EKKQYDQAISAFQAFVKKYPDSTYQPNANYWLGQLNYNKGKKD--------------DAA 195
Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
F V+ NY + + EA+ ++ D+A+ V + + YP A+ + +
Sbjct: 196 YYFANVVKNYPKSPKSSEALLKVGVIMQEKGQADKAKAVYQQVVKMYPNTESAKQAQKRL 255
Score = 50.6 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 16/70 (22%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
++ +Y AI FQ + Y D+ + A L + D+A + + + YP+
Sbjct: 150 EKKQYDQAISAFQAFVKKYPDSTYQPNANYWLGQLNYNKGKKDDAAYYFANVVKNYPKSP 209
Query: 262 WARYVETLVK 271
+ E L+K
Sbjct: 210 --KSSEALLK 217
>gi|238793899|ref|ZP_04637519.1| hypothetical protein yinte0001_25140 [Yersinia intermedia ATCC
29909]
gi|238726802|gb|EEQ18336.1| hypothetical protein yinte0001_25140 [Yersinia intermedia ATCC
29909]
Length = 260
Score = 52.1 bits (122), Expect = 9e-05, Method: Composition-based stats.
Identities = 14/70 (20%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
++ ++ AI FQ + Y + + A L + Y D+A +++ + YP+
Sbjct: 152 EKKQFDQAITAFQGFVKQYPKSTYQPNANYWLGQLYYNKGKKDDAAYYYAVVVKNYPKSP 211
Query: 262 WARYVETLVK 271
+ E + K
Sbjct: 212 --KSSEAMFK 219
Score = 51.3 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/120 (15%), Positives = 44/120 (36%), Gaps = 14/120 (11%)
Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
+++ + V++Y S Y A +++ K+ A
Sbjct: 152 EKKQFDQAITAFQGFVKQYPKSTYQPNANYWLGQLYYNKGKKD--------------DAA 197
Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
+ +V+ NY + + EAM ++ D+A+ V + ++YP A+ + +
Sbjct: 198 YYYAVVVKNYPKSPKSSEAMFKVGVIMQDKGQSDKAKAVYQQVIKQYPNTDAAKQAQKRL 257
>gi|298368849|ref|ZP_06980167.1| periplasmic protein [Neisseria sp. oral taxon 014 str. F0314]
gi|298282852|gb|EFI24339.1| periplasmic protein [Neisseria sp. oral taxon 014 str. F0314]
Length = 225
Score = 52.1 bits (122), Expect = 9e-05, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 24/75 (32%)
Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
+ + + G + I + + A +AM + + L D AR+
Sbjct: 144 NMYLLLQSQQRLGNCESVINIGGRYANRFRNTAQAPDAMYSIGQCQYKLQQKDIARDTWR 203
Query: 252 LIQERYPQGYWARYV 266
+ YP A+
Sbjct: 204 KLIHTYPDSEAAKRA 218
>gi|213420844|ref|ZP_03353910.1| outer membrane protein assembly complex subunit YfiO [Salmonella
enterica subsp. enterica serovar Typhi str. E01-6750]
Length = 137
Score = 52.1 bits (122), Expect = 9e-05, Method: Composition-based stats.
Identities = 20/118 (16%), Positives = 40/118 (33%), Gaps = 7/118 (5%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + + + FL G E+Y A L++ N+ +A
Sbjct: 1 MTRMKYLVAAATLSLFLAGCSGSKEE-------VPDNPPNEIYATAQQKLQDGNWKQAIT 53
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
+PF +++ L + Y A + + ++ P N+DYV Y+
Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFMRLNPTHPNIDYVMYM 111
>gi|56414133|ref|YP_151208.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|168820115|ref|ZP_02832115.1| tetratricopeptide TPR_2 repeat protein [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|197249869|ref|YP_002145711.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|197363055|ref|YP_002142692.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|198246203|ref|YP_002214720.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|205352014|ref|YP_002225815.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|207856194|ref|YP_002242845.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|238911683|ref|ZP_04655520.1| hypothetical protein SentesTe_11172 [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
gi|56128390|gb|AAV77896.1| putative exported protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197094532|emb|CAR60052.1| putative exported protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|197213572|gb|ACH50969.1| tetratricopeptide TPR_2 repeat protein [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197940719|gb|ACH78052.1| tetratricopeptide TPR_2 repeat protein [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|205271795|emb|CAR36629.1| putative exported protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|205343137|gb|EDZ29901.1| tetratricopeptide TPR_2 repeat protein [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|206707997|emb|CAR32286.1| putative exported protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|320085021|emb|CBY94810.1| Uncharacterized protein ybgF Flags: Precursor [Salmonella enterica
subsp. enterica serovar Weltevreden str. 2007-60-3289-1]
gi|326622476|gb|EGE28821.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
serovar Dublin str. 3246]
gi|326627055|gb|EGE33398.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9]
Length = 262
Score = 51.7 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 19/121 (15%), Positives = 41/121 (33%), Gaps = 14/121 (11%)
Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
D+ + +++Y +S Y A +++ K+ A
Sbjct: 153 QDKSRQDDAIVAFQNFIKKYPDSTYQPNANYWLGQLNYNKGKKD--------------DA 198
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
F V+ NY + A +AM ++ +A+ V + +YP A+ +
Sbjct: 199 AYYFASVVKNYPKSPKAADAMYKVGVIMQDKGDTAKAKAVYQQVINKYPGTDGAKQAQKR 258
Query: 270 V 270
+
Sbjct: 259 L 259
Score = 51.3 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 23/74 (31%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ AI FQ + Y D+ + A L + D+A +
Sbjct: 145 YNAAIALVQDKSRQDDAIVAFQNFIKKYPDSTYQPNANYWLGQLNYNKGKKDDAAYYFAS 204
Query: 253 IQERYPQGYWARYV 266
+ + YP+ A
Sbjct: 205 VVKNYPKSPKAADA 218
>gi|50120314|ref|YP_049481.1| tol-pal system protein YbgF [Pectobacterium atrosepticum SCRI1043]
gi|49610840|emb|CAG74285.1| putative exported protein [Pectobacterium atrosepticum SCRI1043]
Length = 258
Score = 51.7 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 19/120 (15%), Positives = 43/120 (35%), Gaps = 14/120 (11%)
Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
+++ + V++Y +S Y A +++ K+ A
Sbjct: 150 EKKQYDQAISAFQAFVKKYPDSTYQPNANYWLGQLNYNKGKKD--------------DAA 195
Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
F V+ NY + + EA+ ++ D+A+ V + + YP A+ + +
Sbjct: 196 YYFANVVKNYPKSPKSSEALLKVGVIMQEKGQADKAKAVYQQVVKMYPNTESAKQAQKRL 255
Score = 50.6 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 16/70 (22%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
++ +Y AI FQ + Y D+ + A L + D+A + + + YP+
Sbjct: 150 EKKQYDQAISAFQAFVKKYPDSTYQPNANYWLGQLNYNKGKKDDAAYYFANVVKNYPKSP 209
Query: 262 WARYVETLVK 271
+ E L+K
Sbjct: 210 --KSSEALLK 217
>gi|332992287|gb|AEF02342.1| type IV pilus biogenesis/stability protein PilW [Alteromonas sp.
SN2]
Length = 342
Score = 51.7 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 25/249 (10%), Positives = 60/249 (24%), Gaps = 2/249 (0%)
Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
+ I AV FL G S Y + + + +LK N+ +A +Q
Sbjct: 1 MRIGLIAAVIFLAGCVSNSQPGSYNSNFDRQEAAKTRMSLGLTYLKNNNYKQAKVNLDQA 60
Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
P + ++ + + + N + Y
Sbjct: 61 LEYDPRSAEVNYAIAYYYQLVGDVKRADDLYQTAMSLAPYNGDIANSYGAFKCQDGDYED 120
Query: 144 MIRDVPYDQRATKLMLQ-YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
+ + S + + +
Sbjct: 121 AKEYFLKAVSNQQYANSAETYENLALCAQSQGNVDDAITYFQSALKHQPLRAKSLYLLTE 180
Query: 203 RGEYVAAIPRFQLVLANYSD-AEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
+ L Y A+ + +++ E + + A+EV + +P
Sbjct: 181 LYIATEQWTSAKYTLDKYQRVAKPSPDSLWLSFEIHQGTNDWEGAKEVGYKLSTLFPDSP 240
Query: 262 WARYVETLV 270
+ + ++
Sbjct: 241 YTADYKNIL 249
>gi|297182009|gb|ADI18184.1| uncharacterized protein conserved in bacteria [uncultured delta
proteobacterium HF0200_39N20]
Length = 258
Score = 51.7 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 15/82 (18%), Positives = 37/82 (45%)
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
A + +G +L+RG + + ++L Y+ H A+ L +A LA ++ +
Sbjct: 169 KAQILMSLGNGFLERGHATQSAYYYGIILREYTGTSHVPNALYYLGKAMEELAETEKQKV 228
Query: 249 VVSLIQERYPQGYWARYVETLV 270
+ + + + +P A+ + +
Sbjct: 229 LWNELIKNHPNSPLAKRAKKRL 250
>gi|332993880|gb|AEF03935.1| tetratricopeptide TPR_2 [Alteromonas sp. SN2]
Length = 262
Score = 51.7 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/120 (17%), Positives = 42/120 (35%), Gaps = 14/120 (11%)
Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
R + ++R+ NS Y A +++ G+ + ++ AI
Sbjct: 154 KSREYDKAIPAFQSFIQRFPNSEYAPNAHYWL--------------GQLLFNKQQWNDAI 199
Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
+F +V +SD+ +A+ +L AR + YP R E+ +
Sbjct: 200 EQFNIVSNRFSDSVKRPDALLKLGVIAERTGDSSGARNFFQQVISEYPNSSAKRLAESRL 259
Score = 38.6 bits (87), Expect = 0.91, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 33/79 (41%), Gaps = 2/79 (2%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
LK EY AIP FQ + + ++E+A A L + ++A E ++
Sbjct: 145 YDSAVNLILKSREYDKAIPAFQSFIQRFPNSEYAPNAHYWLGQLLFNKQQWNDAIEQFNI 204
Query: 253 IQERYPQGYWARYVETLVK 271
+ R+ + + L+K
Sbjct: 205 VSNRFSDSV--KRPDALLK 221
>gi|34540927|ref|NP_905406.1| lipoprotein protein [Porphyromonas gingivalis W83]
gi|34397242|gb|AAQ66305.1| lipoprotein protein, putative [Porphyromonas gingivalis W83]
Length = 270
Score = 51.7 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 49/261 (18%), Positives = 88/261 (33%), Gaps = 24/261 (9%)
Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
IFF+ D+ Y A F E+ +SKA
Sbjct: 6 LIFFAALTFLFASCGEFVRIQQSPDASLK-------YSYAKKFYNERKYSKAASLLEDVR 58
Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
+ + + + A + A +EY +YP+ + Y G + +
Sbjct: 59 GIYDGTSEGEQLMFLLAECYLEMRRDADAGICYQEYYNKYPKGLRAEEARYKAGYCFYEA 118
Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK-- 202
D DQ T L +Q + ++ + N Y K A + +++LA KE + Y
Sbjct: 119 SPDSRLDQSDTYLAIQELQSYLDFFPNGKYAKEAENMLFGLQDKLAYKEYRTAKLYYNLG 178
Query: 203 ---RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA-----------LMDEARE 248
Y + I + L Y +H EE + +++A A D A +
Sbjct: 179 LYLGNNYRSCIVTAEAALKTYPYTKHREELVFLMLQAMYEEASFSVSEKLQTRYRDVADQ 238
Query: 249 VVSLIQERYPQGYWARYVETL 269
+ I E +P G + + + +
Sbjct: 239 YFAYINE-FPNGKYLKQAKKI 258
>gi|62179324|ref|YP_215741.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|224582569|ref|YP_002636367.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|62126957|gb|AAX64660.1| putative periplasmic protein [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|224467096|gb|ACN44926.1| hypothetical protein SPC_0751 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|322713795|gb|EFZ05366.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
serovar Choleraesuis str. A50]
Length = 262
Score = 51.7 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/121 (15%), Positives = 41/121 (33%), Gaps = 14/121 (11%)
Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
D+ + +++Y +S Y A +++ K+ A
Sbjct: 153 QDKSRQDDAIVAFQNFIKKYPDSTYQPNANYWLGQLNYNKGKKD--------------DA 198
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
F V+ NY + A +AM ++ +A+ V + +YP A+ +
Sbjct: 199 AYYFASVVKNYPKSPKAADAMYKVGVIMQDKGDTAKAKAVYQQVINKYPGTDGAKQAQKR 258
Query: 270 V 270
+
Sbjct: 259 L 259
Score = 51.3 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 23/74 (31%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ AI FQ + Y D+ + A L + D+A +
Sbjct: 145 YNAAIALVQDKSRQDDAIVAFQNFIKKYPDSTYQPNANYWLGQLNYNKGKKDDAAYYFAS 204
Query: 253 IQERYPQGYWARYV 266
+ + YP+ A
Sbjct: 205 VVKNYPKSPKAADA 218
>gi|16764120|ref|NP_459735.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|161615016|ref|YP_001588981.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
serovar Paratyphi B str. SPB7]
gi|167995343|ref|ZP_02576433.1| tetratricopeptide TPR_2 repeat protein [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|168240608|ref|ZP_02665540.1| tetratricopeptide TPR_2 repeat protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|168264360|ref|ZP_02686333.1| tetratricopeptide TPR_2 repeat protein [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|168467687|ref|ZP_02701524.1| tetratricopeptide TPR_2 repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|194442204|ref|YP_002039991.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|194449345|ref|YP_002044784.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|197261877|ref|ZP_03161951.1| tetratricopeptide TPR_2 repeat protein [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|16419260|gb|AAL19694.1| putative periplasmic protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|161364380|gb|ABX68148.1| hypothetical protein SPAB_02776 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194400867|gb|ACF61089.1| tetratricopeptide TPR_2 repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194407649|gb|ACF67868.1| tetratricopeptide TPR_2 repeat protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|195629168|gb|EDX48536.1| tetratricopeptide TPR_2 repeat protein [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|197240132|gb|EDY22752.1| tetratricopeptide TPR_2 repeat protein [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|205326988|gb|EDZ13752.1| tetratricopeptide TPR_2 repeat protein [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|205339982|gb|EDZ26746.1| tetratricopeptide TPR_2 repeat protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|205347197|gb|EDZ33828.1| tetratricopeptide TPR_2 repeat protein [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|261246013|emb|CBG23815.1| putative exported protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267992491|gb|ACY87376.1| hypothetical protein STM14_0872 [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|301157341|emb|CBW16830.1| putative exported protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312911777|dbj|BAJ35751.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|321226329|gb|EFX51380.1| TPR repeat containing exported protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. TN061786]
gi|323129062|gb|ADX16492.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
serovar Typhimurium str. 4/74]
gi|332987687|gb|AEF06670.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
Length = 262
Score = 51.7 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/121 (15%), Positives = 41/121 (33%), Gaps = 14/121 (11%)
Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
D+ + +++Y +S Y A +++ K+ A
Sbjct: 153 QDKSRQDDAIVAFQNFIKKYPDSTYQPNANYWLGQLNYNKGKKD--------------DA 198
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
F V+ NY + A +AM ++ +A+ V + +YP A+ +
Sbjct: 199 AYYFASVVKNYPKSPKAADAMYKVGVIMQDKGDTAKAKAVYQQVINKYPGTDGAKQAQKR 258
Query: 270 V 270
+
Sbjct: 259 L 259
Score = 50.9 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 23/74 (31%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ AI FQ + Y D+ + A L + D+A +
Sbjct: 145 YNAAIALVQDKSRQDDAIVAFQNFIKKYPDSTYQPNANYWLGQLNYNKGKKDDAAYYFAS 204
Query: 253 IQERYPQGYWARYV 266
+ + YP+ A
Sbjct: 205 VVKNYPKSPKAADA 218
>gi|170769032|ref|ZP_02903485.1| tol-pal system protein YbgF [Escherichia albertii TW07627]
gi|170122104|gb|EDS91035.1| tol-pal system protein YbgF [Escherichia albertii TW07627]
Length = 263
Score = 51.7 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 24/74 (32%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ A+ FQ + NY D+ + A L + D+A +
Sbjct: 146 YNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDDAAYYFAS 205
Query: 253 IQERYPQGYWARYV 266
+ + YP+ A
Sbjct: 206 VVKNYPKSPKAADA 219
Score = 49.4 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 28/201 (13%), Positives = 56/201 (27%), Gaps = 14/201 (6%)
Query: 70 EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129
+ NQ + SL S G Q A+ +
Sbjct: 74 RGQIQENQYQLNQVVERQKQILLQMDSLSSGGSTTQSTGGAQSGATATTTPTADAGTANA 133
Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
V + + D+ + ++ Y +S Y+ A +++
Sbjct: 134 GAAVKSGDPNTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNK 193
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
K+ A F V+ NY + A +AM ++ +A+ V
Sbjct: 194 GKKD--------------DAAYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAV 239
Query: 250 VSLIQERYPQGYWARYVETLV 270
+ +YP A+ + +
Sbjct: 240 YQQVISKYPGTDGAKQAQKRL 260
>gi|283833961|ref|ZP_06353702.1| putative periplasmic protein [Citrobacter youngae ATCC 29220]
gi|291070092|gb|EFE08201.1| putative periplasmic protein [Citrobacter youngae ATCC 29220]
Length = 262
Score = 51.7 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/121 (15%), Positives = 43/121 (35%), Gaps = 14/121 (11%)
Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
D+ ++ +++Y +S Y+ A +++ K+ A
Sbjct: 153 QDKSRQDDAIEAFQNFIKKYPDSTYLPNANYWLGQLNYNKGKKD--------------DA 198
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
F V+ NY + A +AM ++ +A+ V + +YP A+ +
Sbjct: 199 AFYFASVVKNYPKSPKAADAMYKVGVIMQDKGDTAKAKAVYQQVITKYPGTDGAKQAQKR 258
Query: 270 V 270
+
Sbjct: 259 L 259
Score = 50.6 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 23/74 (31%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ AI FQ + Y D+ + A L + D+A +
Sbjct: 145 YNAAIALVQDKSRQDDAIEAFQNFIKKYPDSTYLPNANYWLGQLNYNKGKKDDAAFYFAS 204
Query: 253 IQERYPQGYWARYV 266
+ + YP+ A
Sbjct: 205 VVKNYPKSPKAADA 218
>gi|255068170|ref|ZP_05320025.1| putative periplasmic protein [Neisseria sicca ATCC 29256]
gi|255047597|gb|EET43061.1| putative periplasmic protein [Neisseria sicca ATCC 29256]
Length = 246
Score = 51.7 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/258 (8%), Positives = 52/258 (20%), Gaps = 29/258 (11%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K +F I L + + D+ + A
Sbjct: 1 MNKTLPILFAGI--LLLNACASTAPKPKSGDTFMLP-----------------DIPTATA 41
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+ + L M + E + P N +
Sbjct: 42 ESSAIPYPDLNTMTQIERLGMQVERLEREMENTNQRLQQLEKQNKTPRHSNRKVPAQRLD 101
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
+ ++ + Y + + + A
Sbjct: 102 DQKLKSTYLANGGTAPSEADSANQNETHLYNQALKYYQRNNYAAAAAVLKGADGGNGSES 161
Query: 199 YYLKRGEYVAAIPRFQLVL----------ANYSDAEHAEEAMARLVEAYVALALMDEARE 248
+ + + ++ A +A+ + + L D AR
Sbjct: 162 ARRNMYLLLQSQQHMGNCESVIEIGGRFANRFRNSPQAPDALFSIGQCQYKLQQKDIARN 221
Query: 249 VVSLIQERYPQGYWARYV 266
+ + YP A+
Sbjct: 222 TWRKLIQSYPGSAAAKRA 239
>gi|255691532|ref|ZP_05415207.1| putative lipoprotein [Bacteroides finegoldii DSM 17565]
gi|260622922|gb|EEX45793.1| putative lipoprotein [Bacteroides finegoldii DSM 17565]
Length = 267
Score = 51.7 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 44/265 (16%), Positives = 88/265 (33%), Gaps = 22/265 (8%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
I +A L + D YE A + + ++++
Sbjct: 1 MKKNIIITLLAAATLTSCGEYNKLLKSTDYEYK-------YEAAKNYFAKGQYNRSATLL 53
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
N+ A +SL M Y+ YQ AA Y YP + + G +
Sbjct: 54 NELITILKGTDKAEESLYMLGMSYYNQKDYQTAAQTFITYFNTYPRGTFTELARFHAGKA 113
Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
+ DQ +T +Q + +E + NS + A+ + +++L KE+ + Y
Sbjct: 114 LFLDTPEPRLDQSSTYQAIQQLQMFMEYFPNSSKKQEAQDMIFALQDKLVLKELYSAKLY 173
Query: 201 LK-----RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD----------E 245
Y + + Q L +Y ++ EE ++ A +A+ E
Sbjct: 174 YNLGNYLGNNYESCVITAQNALKDYPYTDYREELSILILRARYEMAIYSVEDKKMDRYRE 233
Query: 246 AREVVSLIQERYPQGYWARYVETLV 270
+ + +P+ + + E +
Sbjct: 234 TIDEYYAFKNEFPESKYLKEAEKIF 258
>gi|313675083|ref|YP_004053079.1| outer membrane assembly lipoprotein yfio [Marivirga tractuosa DSM
4126]
gi|312941781|gb|ADR20971.1| outer membrane assembly lipoprotein YfiO [Marivirga tractuosa DSM
4126]
Length = 280
Score = 51.3 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 38/230 (16%), Positives = 80/230 (34%), Gaps = 16/230 (6%)
Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
+ Y+ A+ + ++ + KA Q + A + + Y +Y A+
Sbjct: 40 EKKYDAAISYYEQGEYYKANVLLEQILPIIKGSEKAEIANFYYGYTYYYQEQYLLASHYF 99
Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
+ + + S+ + ++ S Q DQ ++K + + + + NS YV
Sbjct: 100 KTFYDTFNRSEFAEEARFMFAFSLFQDSPRYNLDQTSSKEAIVALQGFINLFPNSEYVPK 159
Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP------RFQLVLANYSDAEHAEEAMA 231
A ++ R++L K E Y +++ F ++ ++ EE
Sbjct: 160 ADAALSQLRSKLERKAYEKALLYYDLKKHMTGEFLKAALVEFDNFQDDFPGSQFTEEIRY 219
Query: 232 RLVEAYVALALMD----------EAREVVSLIQERYPQGYWARYVETLVK 271
+EA LA + EA + E Y Q + E + +
Sbjct: 220 LEIEAMYKLAQVSIYSVRKERYLEAMDFYEDFIETYEQSNYLPKAEKIYE 269
>gi|261377462|ref|ZP_05982035.1| putative periplasmic protein [Neisseria cinerea ATCC 14685]
gi|269146190|gb|EEZ72608.1| putative periplasmic protein [Neisseria cinerea ATCC 14685]
Length = 238
Score = 51.3 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 13/70 (18%), Positives = 26/70 (37%)
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
+ G + I + + A EA+ ++ E L D AR + + YP
Sbjct: 167 RMGNCESVIEIGRRYANRFKGTPAAPEAIFKIGECQYRLQQKDIARATWRGLIQAYPGSP 226
Query: 262 WARYVETLVK 271
A+ + ++
Sbjct: 227 AAKRAASAIR 236
>gi|118578970|ref|YP_900220.1| putative lipoprotein [Pelobacter propionicus DSM 2379]
gi|118501680|gb|ABK98162.1| lipoprotein, putative [Pelobacter propionicus DSM 2379]
Length = 236
Score = 51.3 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 34/248 (13%), Positives = 66/248 (26%), Gaps = 19/248 (7%)
Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
T +++ L G D+ + T+ + E +A Q + +
Sbjct: 5 IRTAACAVSCLALTGCASH---DLMVKRQTEAEAKIEHLIEA-DKRNSQRMNALSGQLQE 60
Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
+ L S + S E T +K G
Sbjct: 61 LELRLRDSNGRISQLQASI-GEMQVKGESTTPSHPEPAPTIELVNKEPASKGGESGPPAE 119
Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
+ Y + +Q + S Y A ++ IG +
Sbjct: 120 YVKAFGLYSANSFSAAIQAFQAFLANSPGSDYTPNALYW--------------IGECHYT 165
Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
++ A F+ + Y + A +A+ +L A+ D A + +YP
Sbjct: 166 LSDFPQAAAAFKKLAEGYPKSAKAPDALLKLGYTQTAMKQRDRATRTFESLIRQYPSSPA 225
Query: 263 ARYVETLV 270
A +
Sbjct: 226 ASRARERL 233
>gi|160885705|ref|ZP_02066708.1| hypothetical protein BACOVA_03709 [Bacteroides ovatus ATCC 8483]
gi|237719449|ref|ZP_04549930.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|260174433|ref|ZP_05760845.1| hypothetical protein BacD2_21432 [Bacteroides sp. D2]
gi|293370226|ref|ZP_06616786.1| outer membrane assembly lipoprotein YfiO [Bacteroides ovatus SD CMC
3f]
gi|299146193|ref|ZP_07039261.1| conserved hypothetical protein [Bacteroides sp. 3_1_23]
gi|315922700|ref|ZP_07918940.1| conserved hypothetical protein [Bacteroides sp. D2]
gi|156108518|gb|EDO10263.1| hypothetical protein BACOVA_03709 [Bacteroides ovatus ATCC 8483]
gi|229451309|gb|EEO57100.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|292634723|gb|EFF53252.1| outer membrane assembly lipoprotein YfiO [Bacteroides ovatus SD CMC
3f]
gi|298516684|gb|EFI40565.1| conserved hypothetical protein [Bacteroides sp. 3_1_23]
gi|313696575|gb|EFS33410.1| conserved hypothetical protein [Bacteroides sp. D2]
Length = 267
Score = 51.3 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 45/266 (16%), Positives = 86/266 (32%), Gaps = 24/266 (9%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
I +A L + D YE A + + ++++
Sbjct: 1 MKKNIIITLLAAATLTSCGEYNKLLKSTDYEYK-------YEAAKNYFAKGQYNRSATLL 53
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
N+ A +SL M Y+ YQ AA Y YP + + G +
Sbjct: 54 NELITILKGTDKAEESLYMLGMSYYNQKDYQTAAQTFITYFNTYPRGTFTELARFHAGKA 113
Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
+ DQ +T +Q + +E + NS + A+ + +++L KE+ R Y
Sbjct: 114 LFLDTPEPRLDQSSTYQAIQQLQMFMEYFPNSTKKQEAQDMIFALQDKLVLKELYSARLY 173
Query: 201 LK-----RGEYVAAIPRFQLVLANYSDAEHAEE-------AMARLVEAY----VALALMD 244
Y + + Q L +Y ++ EE A + Y +
Sbjct: 174 YNLGNYLGNNYESCVITAQNALKDYPYTDYREELSILVLRARHEMA-IYSVEDKKMDRYR 232
Query: 245 EAREVVSLIQERYPQGYWARYVETLV 270
E + + +P+ + + E +
Sbjct: 233 ETIDEYYAFKNEFPESKYLKEAEKIF 258
>gi|225076465|ref|ZP_03719664.1| hypothetical protein NEIFLAOT_01511 [Neisseria flavescens
NRL30031/H210]
gi|224952144|gb|EEG33353.1| hypothetical protein NEIFLAOT_01511 [Neisseria flavescens
NRL30031/H210]
Length = 251
Score = 51.3 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 12/81 (14%), Positives = 27/81 (33%)
Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
+ + + G + I + ++ A +AM + + L D AR
Sbjct: 169 RNMYLLLQSQQRLGNCESVIEIGNRYANRFRNSPQAPDAMYSIGQCQYKLQQKDIARSTW 228
Query: 251 SLIQERYPQGYWARYVETLVK 271
+ + +P A+ +K
Sbjct: 229 RKLIQSFPNSEAAKRASISIK 249
>gi|311280378|ref|YP_003942609.1| tol-pal system protein YbgF [Enterobacter cloacae SCF1]
gi|308749573|gb|ADO49325.1| tol-pal system protein YbgF [Enterobacter cloacae SCF1]
Length = 263
Score = 51.3 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/117 (15%), Positives = 39/117 (33%), Gaps = 14/117 (11%)
Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213
+ +++Y +S Y A +++ K+ A F
Sbjct: 158 RQDDAIAAFQSFIKKYPDSTYQPNANYWLGQLNYNKGKKD--------------DAAFYF 203
Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
V+ NY + A +AM ++ +A+ V + +YP A+ + +
Sbjct: 204 ASVVKNYPKSPKAADAMYKVGVIMQDKGDTAKAKAVYQQVVSKYPGTEGAKQAQKRL 260
Score = 48.3 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 22/74 (29%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
AI FQ + Y D+ + A L + D+A +
Sbjct: 146 YNAAIALVKDASRQDDAIAAFQSFIKKYPDSTYQPNANYWLGQLNYNKGKKDDAAFYFAS 205
Query: 253 IQERYPQGYWARYV 266
+ + YP+ A
Sbjct: 206 VVKNYPKSPKAADA 219
>gi|301020782|ref|ZP_07184848.1| tol-pal system protein YbgF [Escherichia coli MS 69-1]
gi|300398507|gb|EFJ82045.1| tol-pal system protein YbgF [Escherichia coli MS 69-1]
Length = 225
Score = 51.3 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 24/74 (32%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ A+ FQ + NY D+ + A L + D+A +
Sbjct: 108 YNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDDAAYYFAS 167
Query: 253 IQERYPQGYWARYV 266
+ + YP+ A
Sbjct: 168 VVKNYPKSPKAADA 181
Score = 48.6 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 19/121 (15%), Positives = 41/121 (33%), Gaps = 14/121 (11%)
Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
D+ + ++ Y +S Y+ A +++ K+ A
Sbjct: 116 QDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKD--------------DA 161
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
F V+ NY + A +AM ++ +A+ V + +YP A+ +
Sbjct: 162 AYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKYPGTDGAKQAQKR 221
Query: 270 V 270
+
Sbjct: 222 L 222
>gi|237714494|ref|ZP_04544975.1| conserved hypothetical protein [Bacteroides sp. D1]
gi|262406359|ref|ZP_06082908.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294643239|ref|ZP_06721065.1| outer membrane assembly lipoprotein YfiO [Bacteroides ovatus SD CC
2a]
gi|294806432|ref|ZP_06765273.1| outer membrane assembly lipoprotein YfiO [Bacteroides xylanisolvens
SD CC 1b]
gi|298482860|ref|ZP_07001043.1| hypothetical protein HMPREF0106_03328 [Bacteroides sp. D22]
gi|229445263|gb|EEO51054.1| conserved hypothetical protein [Bacteroides sp. D1]
gi|262355062|gb|EEZ04153.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|292641362|gb|EFF59554.1| outer membrane assembly lipoprotein YfiO [Bacteroides ovatus SD CC
2a]
gi|294446295|gb|EFG14921.1| outer membrane assembly lipoprotein YfiO [Bacteroides xylanisolvens
SD CC 1b]
gi|295083909|emb|CBK65432.1| outer membrane assembly lipoprotein YfiO [Bacteroides xylanisolvens
XB1A]
gi|298271060|gb|EFI12638.1| hypothetical protein HMPREF0106_03328 [Bacteroides sp. D22]
Length = 267
Score = 51.3 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 45/265 (16%), Positives = 88/265 (33%), Gaps = 22/265 (8%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
I +A L + D YE A + + ++++
Sbjct: 1 MKKNIIITLLAAATLTSCGEYNKLLKSTDYEYK-------YEAAKNYFAKGQYNRSATLL 53
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
N+ A +SL M Y+ YQ AA Y YP + + G +
Sbjct: 54 NELITILKGTDKAEESLYMLGMSYYNQKDYQTAAQTFITYFNTYPRGTFTELARFHAGKA 113
Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
+ DQ +T +Q + +E + NS + A+ + +++L KE+ R Y
Sbjct: 114 LFLDTPEPRLDQSSTYQAIQQLQMFMEYFPNSTKKQEAQDMIFALQDKLVLKELYSARLY 173
Query: 201 LK-----RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD----------E 245
Y + + Q L +Y ++ EE ++ A +A+ E
Sbjct: 174 YNLGNYLGNNYESCVITAQNALKDYPYTDYREELSILILRARHEMAIYSVEDKKMDRYRE 233
Query: 246 AREVVSLIQERYPQGYWARYVETLV 270
+ + +P+ + + E +
Sbjct: 234 TVDEYYAFKNEFPESKYLKEAEKIF 258
>gi|255012572|ref|ZP_05284698.1| TPR domain-containing protein [Bacteroides sp. 2_1_7]
Length = 999
Score = 51.3 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 34/220 (15%), Positives = 61/220 (27%), Gaps = 22/220 (10%)
Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
Y Y + K + + +A F Q + + Q
Sbjct: 500 NTDMYALAHYNLGYSYFKLKEYGEALNRFRQYVNLESNQQTPAYADAYNRIGDCLFHNRQ 559
Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
A + + DY Y G + M R++ +
Sbjct: 560 FAMAEENYTRAAQLQPSAGDYSVYQKGFLLGLQKDYKGK--------ISVMDRLIREFPE 611
Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231
S YV A F E GR Y+ A F+ ++ ++ + A +A
Sbjct: 612 SQYVDDALF--------------EKGRSYVLLDNNQTAAASFEQLMRDFPQSSLARKAGV 657
Query: 232 RLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+L Y ++A + + YP A+ +K
Sbjct: 658 QLGLIYFNDNQPEKAADAYKSVISNYPGSEEAKVALQDLK 697
Score = 41.3 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 23/252 (9%), Positives = 62/252 (24%), Gaps = 14/252 (5%)
Query: 28 FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87
I +C +VG S + Y ++ + +N+S + +
Sbjct: 4 ILIPLCLVVGSHMASGQRSY-----QFDAPNRLFVEGKELFSLKNYSGCIDKLEAYKQHS 58
Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY-----YLVGMSYA 142
A + +++ M + Y G+ L + + + + Y
Sbjct: 59 TDADLIQEADYMLVYSAYEQGRPNAVELLKDYLDVYPASRHADEVNFLIGSAHFGQGEYQ 118
Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
+ I Q + + +
Sbjct: 119 KAIFWFNESNIDMLSPEQQEAYCFRLAYSLLQIGDMEKARGYFARIEQIGTKYREASTYY 178
Query: 203 RGEYVAAIPRFQLVLANYSDAE----HAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
A ++ L ++ + + E ++ + + Y ++ + YP
Sbjct: 179 VAYIDYATGKYNNALVEFTRLKDLPDYKERSLYYITQIYFIQNKYEKVISEGKELLASYP 238
Query: 259 QGYWARYVETLV 270
V ++
Sbjct: 239 DSENNSEVYRIM 250
Score = 37.9 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 31/232 (13%), Positives = 63/232 (27%), Gaps = 13/232 (5%)
Query: 32 VCFLVGWERQSSRDVYLDS--VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89
+ L + + Q Y ++ A E +P
Sbjct: 38 LFSLKNYSGCIDKLEAYKQHSTDADLIQEADYMLVYSAYEQGR-PNAVELLKDYLDVYPA 96
Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL---------VGMS 140
+ A + + + G+YQ+A E + + +
Sbjct: 97 SRHADEVNFLIGSAHFGQGEYQKAIFWFNESNIDMLSPEQQEAYCFRLAYSLLQIGDMEK 156
Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE-VEIGRY 199
+ + Y ++ T F + I +
Sbjct: 157 ARGYFARIEQIGTKYREASTYYVAYIDYATGKYNNALVEFTRLKDLPDYKERSLYYITQI 216
Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
Y + +Y I + +LA+Y D+E+ E + AY L D+A ++S
Sbjct: 217 YFIQNKYEKVISEGKELLASYPDSENNSEVYRIMGNAYYHLGNEDQAINMLS 268
Score = 37.1 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 23/227 (10%), Positives = 64/227 (28%), Gaps = 15/227 (6%)
Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
+R +Y ++ + + K + +P + + + Y G QA ++
Sbjct: 207 ERSLYYITQIYFIQNKYEKVISEGKELLASYPDSENNSEVYRIMGNAYYHLGNEDQAINM 266
Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY---DQRATKLMLQYMSRIVERYTNSP 173
+Y++ D V L + + +
Sbjct: 267 LSKYVSSTDSPLRGDLYILGVCYYNKGNYSSAVNALGRTVRENDALSQNAYLYLGQSYLK 326
Query: 174 YVKGARFYV----------TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
+ + A + + + ++ F+ L ++ ++
Sbjct: 327 LKDKNNARMAFEAAATSSFDKQVKEAAMYNYALLIHETAFTGFGESVTIFEDFLNDFPNS 386
Query: 224 EHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
++A++ LVE Y+ A + I+ P + ++
Sbjct: 387 KYADKVNDYLVEVYLTTKNYQAALNSIDKIKH--PSTKILEAKQDIL 431
>gi|77163685|ref|YP_342210.1| TPR repeat-containing protein [Nitrosococcus oceani ATCC 19707]
gi|254435696|ref|ZP_05049203.1| tol-pal system protein YbgF, putative [Nitrosococcus oceani AFC27]
gi|76881999|gb|ABA56680.1| TPR repeat protein [Nitrosococcus oceani ATCC 19707]
gi|207088807|gb|EDZ66079.1| tol-pal system protein YbgF, putative [Nitrosococcus oceani AFC27]
Length = 257
Score = 51.3 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 33/80 (41%), Gaps = 2/80 (2%)
Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
+ + LK G Y AI F Y D+ + A L EA L + A +
Sbjct: 133 QTYQAALELLKEGRYEEAIAAFDQFPQQYPDSRYRPNAQYWLGEARYMLGDFNAAADTFQ 192
Query: 252 LIQERYPQGYWARYVETLVK 271
+ E+YP+ A+ + ++K
Sbjct: 193 ALVEQYPES--AKVPDAMLK 210
Score = 50.6 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/118 (19%), Positives = 47/118 (39%), Gaps = 14/118 (11%)
Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213
+ + + ++Y +S Y A++++ R L ++ AA F
Sbjct: 146 RYEEAIAAFDQFPQQYPDSRYRPNAQYWLGEARYMLG--------------DFNAAADTF 191
Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
Q ++ Y ++ +AM + AY LA ++A+ + RYP +R E +
Sbjct: 192 QALVEQYPESAKVPDAMLKQGLAYYELAQWEQAKAQFQAVMTRYPASTASRLAEERFE 249
Score = 41.3 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 23/113 (20%), Positives = 44/113 (38%), Gaps = 8/113 (7%)
Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
+ Y+ A+ LKE + +A F+Q + +P + + +Y G + AA
Sbjct: 132 EQTYQAALELLKEGRYEEAIAAFDQFPQQYPDSRYRPNAQYWLGEARYMLGDFNAAADTF 191
Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
+ + QYPES V G++Y ++ + ++ RY
Sbjct: 192 QALVEQYPESAKVPDAMLKQGLAYYEL--------AQWEQAKAQFQAVMTRYP 236
>gi|292487663|ref|YP_003530536.1| Hypothetical protein ybgF [Erwinia amylovora CFBP1430]
gi|292898900|ref|YP_003538269.1| exported protein [Erwinia amylovora ATCC 49946]
gi|291198748|emb|CBJ45857.1| putative exported protein [Erwinia amylovora ATCC 49946]
gi|291553083|emb|CBA20128.1| Hypothetical protein ybgF precursor [Erwinia amylovora CFBP1430]
Length = 259
Score = 51.3 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 16/119 (13%), Positives = 40/119 (33%), Gaps = 14/119 (11%)
Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
+++ + V++Y +S Y A +++ K+ A
Sbjct: 151 EKKQYDSAISAFQTFVKKYPDSTYQPNANYWLGQLNYNKGKKD--------------DAA 196
Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
F V+ Y + + +A+ ++ +A+ V + + YP A+ +
Sbjct: 197 YYFATVVKMYPKSPKSADALFKVGVIMQEKGDKAKAKAVYQQVIKLYPDSEAAKTAQKR 255
Score = 47.9 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
++ +Y +AI FQ + Y D+ + A L + D+A + + + YP+
Sbjct: 151 EKKQYDSAISAFQTFVKKYPDSTYQPNANYWLGQLNYNKGKKDDAAYYFATVVKMYPKSP 210
Query: 262 WARYVETLVK 271
+ + L K
Sbjct: 211 --KSADALFK 218
>gi|150010168|ref|YP_001304911.1| TPR domain-containing protein [Parabacteroides distasonis ATCC
8503]
gi|149938592|gb|ABR45289.1| TPR-domain containing protein [Parabacteroides distasonis ATCC
8503]
Length = 999
Score = 51.3 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 35/220 (15%), Positives = 62/220 (28%), Gaps = 22/220 (10%)
Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
Y Y + K + + +A F Q + + Q
Sbjct: 500 NTDMYALAHYNLGYSYFKLKEYGEALNRFRQYVNLESNQQTPAYADAYNRIGDCLFHNRQ 559
Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
A + + DY Y G + M R++ +
Sbjct: 560 FAMAEENYTRAAQLQPSAGDYSVYQKGFLLGLQKDYKGK--------ISVMDRLIREFPE 611
Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231
S YV A F E GR Y+ AA F+ ++ ++ + A +A
Sbjct: 612 SQYVDDALF--------------EKGRSYVLLDNNQAAAASFEQLMRDFPQSSLARKAGV 657
Query: 232 RLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+L Y ++A + + YP A+ +K
Sbjct: 658 QLGLIYFNDNQPEKAADAYKSVISNYPGSEEAKVALQDLK 697
Score = 38.6 bits (87), Expect = 0.87, Method: Composition-based stats.
Identities = 23/252 (9%), Positives = 62/252 (24%), Gaps = 14/252 (5%)
Query: 28 FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87
I +C +VG S + Y ++ + +N+S + +
Sbjct: 4 ILIPLCLVVGSHMASGQRSY-----QFDAPNRLFVEGKELFSLKNYSGCIDKLEAYKQHS 58
Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY-----YLVGMSYA 142
A + +++ M + Y G+ L + + + + Y
Sbjct: 59 TDADLIQEADYMLVYSAYEQGRPNAVELLKDYLDVYPASRHADEVNFLIGSAHFGQGEYQ 118
Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
+ I Q + + +
Sbjct: 119 KAIFWFNESNIDMLSPEQQEAYCFRLAYSLLQIGDMEKARGYFARIEQIGTKYREASTYY 178
Query: 203 RGEYVAAIPRFQLVLANYSDAE----HAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
A ++ L ++ + + E ++ + + Y ++ + YP
Sbjct: 179 VAYIDYATGKYNNALVEFTRLKDLPDYKERSLCYITQIYFIQNKYEKVISEGKELLASYP 238
Query: 259 QGYWARYVETLV 270
V ++
Sbjct: 239 DSENNSEVYRIM 250
Score = 38.2 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 31/232 (13%), Positives = 63/232 (27%), Gaps = 13/232 (5%)
Query: 32 VCFLVGWERQSSRDVYLDS--VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89
+ L + + Q Y ++ A E +P
Sbjct: 38 LFSLKNYSGCIDKLEAYKQHSTDADLIQEADYMLVYSAYEQGR-PNAVELLKDYLDVYPA 96
Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL---------VGMS 140
+ A + + + G+YQ+A E + + +
Sbjct: 97 SRHADEVNFLIGSAHFGQGEYQKAIFWFNESNIDMLSPEQQEAYCFRLAYSLLQIGDMEK 156
Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE-VEIGRY 199
+ + Y ++ T F + I +
Sbjct: 157 ARGYFARIEQIGTKYREASTYYVAYIDYATGKYNNALVEFTRLKDLPDYKERSLCYITQI 216
Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
Y + +Y I + +LA+Y D+E+ E + AY L D+A ++S
Sbjct: 217 YFIQNKYEKVISEGKELLASYPDSENNSEVYRIMGNAYYHLGNEDQAINMLS 268
>gi|146310898|ref|YP_001175972.1| tol-pal system protein YbgF [Enterobacter sp. 638]
gi|145317774|gb|ABP59921.1| Tetratricopeptide TPR_2 repeat protein [Enterobacter sp. 638]
Length = 264
Score = 51.3 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/201 (14%), Positives = 58/201 (28%), Gaps = 14/201 (6%)
Query: 70 EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129
++ NQ + SL A A Q A+ + +
Sbjct: 74 RGQIQESQYQLNQVVERQKQILLQMDSLSSGAAGAQPAAGDQTGAATATPAPSTGASASA 133
Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
V + + D+ + V++Y +S Y A +++
Sbjct: 134 GAPVQSGDANTDYNAAIALVQDKSRQDDAIAAFQSFVKKYPDSTYQPNANYWLGQLNYNK 193
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
K+ A F V+ NY + A +AM ++ +A+ V
Sbjct: 194 GKKD--------------DAAFYFASVVKNYPKSPKASDAMFKVGVIMQDKGDTAKAKAV 239
Query: 250 VSLIQERYPQGYWARYVETLV 270
+ +YP A+ + +
Sbjct: 240 YQQVVSKYPGTEGAKQAQKRL 260
>gi|258404280|ref|YP_003197022.1| N-acetylmuramoyl-L-alanine amidase [Desulfohalobium retbaense DSM
5692]
gi|257796507|gb|ACV67444.1| N-acetylmuramoyl-L-alanine amidase [Desulfohalobium retbaense DSM
5692]
Length = 603
Score = 50.9 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/140 (13%), Positives = 49/140 (35%), Gaps = 8/140 (5%)
Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
+ + + + + + + + +R N Y A +Y+ +
Sbjct: 63 FQHGWKSFHSLRKNAERARFRSSWMQVKNTFWELYQRNPNGGYAPKALYYLGRVYS---- 118
Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA-LALMDEAREVV 250
E+G+ R ++ A +Q V+ + +++A R ++ L ++A +
Sbjct: 119 ---ELGQRSYLRKDFRQATDYYQRVVTRFPRHSWSDDAQLRKARIHLEHLGEKNQAYLDL 175
Query: 251 SLIQERYPQGYWARYVETLV 270
+ YP G +L+
Sbjct: 176 LSVVHNYPDGDMYAKARSLL 195
>gi|303247252|ref|ZP_07333526.1| tol-pal system protein YbgF [Desulfovibrio fructosovorans JJ]
gi|302491411|gb|EFL51299.1| tol-pal system protein YbgF [Desulfovibrio fructosovorans JJ]
Length = 341
Score = 50.9 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/121 (15%), Positives = 45/121 (37%), Gaps = 14/121 (11%)
Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
++ R + L + S + A F+ G Y + G++ A
Sbjct: 233 FNARQYQQALGIFQEFARNFKTSSLMPNALFWT--------------GECYFQLGDFANA 278
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
+Q V+ Y + +A+ + A++ L A+ + ++YP +A +++
Sbjct: 279 ALAYQEVIEKYPKSPKHADALFKRGVAFMKLGNAGAAKLSFKEVIDKYPDSAFATRAKSM 338
Query: 270 V 270
+
Sbjct: 339 M 339
Score = 48.3 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 28/84 (33%), Gaps = 2/84 (2%)
Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
A G +Y A+ FQ N+ + A+ E Y L A
Sbjct: 220 NPADAVYAKGLSSFNARQYQQALGIFQEFARNFKTSSLMPNALFWTGECYFQLGDFANAA 279
Query: 248 EVVSLIQERYPQGYWARYVETLVK 271
+ E+YP+ ++ + L K
Sbjct: 280 LAYQEVIEKYPKSP--KHADALFK 301
>gi|301027071|ref|ZP_07190445.1| tol-pal system protein YbgF [Escherichia coli MS 196-1]
gi|299879436|gb|EFI87647.1| tol-pal system protein YbgF [Escherichia coli MS 196-1]
Length = 225
Score = 50.9 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 24/74 (32%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ A+ FQ + NY D+ + A L + D+A +
Sbjct: 108 YNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDDAAYYFAS 167
Query: 253 IQERYPQGYWARYV 266
+ + YP+ A
Sbjct: 168 VVKNYPKSPKAADA 181
Score = 48.6 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 19/121 (15%), Positives = 41/121 (33%), Gaps = 14/121 (11%)
Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
D+ + ++ Y +S Y+ A +++ K+ A
Sbjct: 116 QDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKD--------------DA 161
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
F V+ NY + A +AM ++ +A+ V + +YP A+ +
Sbjct: 162 AYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKYPGTDGAKQAQKR 221
Query: 270 V 270
+
Sbjct: 222 L 222
>gi|256838989|ref|ZP_05544499.1| TPR-domain-containing protein [Parabacteroides sp. D13]
gi|298374536|ref|ZP_06984494.1| TPR-domain containing protein [Bacteroides sp. 3_1_19]
gi|256739908|gb|EEU53232.1| TPR-domain-containing protein [Parabacteroides sp. D13]
gi|298268904|gb|EFI10559.1| TPR-domain containing protein [Bacteroides sp. 3_1_19]
Length = 999
Score = 50.9 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 35/220 (15%), Positives = 62/220 (28%), Gaps = 22/220 (10%)
Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
Y Y + K + + +A F Q + + Q
Sbjct: 500 NTDMYALAHYNLGYSYFKLKEYGEALNRFRQYVNLESNQQTPAYADAYNRIGDCLFHNRQ 559
Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
A + + DY Y G + M R++ +
Sbjct: 560 FAMAEENYTRAAQLQPSAGDYSVYQKGFLLGLQKDYKGK--------ISVMDRLIREFPE 611
Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231
S YV A F E GR Y+ AA F+ ++ ++ + A +A
Sbjct: 612 SQYVDDALF--------------EKGRSYVLLDNNQAAAASFEQLMRDFPQSSLARKAGV 657
Query: 232 RLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+L Y ++A + + YP A+ +K
Sbjct: 658 QLGLIYFNDNQPEKAADAYKSVISNYPGSEEAKVALQDLK 697
Score = 41.3 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 23/252 (9%), Positives = 62/252 (24%), Gaps = 14/252 (5%)
Query: 28 FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87
I +C +VG S + Y ++ + +N+S + +
Sbjct: 4 ILIPLCLVVGSHMASGQRSY-----QFDAPNRLFVEGKELFSLKNYSGCIDKLEAYKQHS 58
Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY-----YLVGMSYA 142
A + +++ M + Y G+ L + + + + Y
Sbjct: 59 TDADLIQEADYMLVYSAYEQGRPNAVELLKDYLDVYPASRHADEVNFLIGSAHFGQGEYQ 118
Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
+ I Q + + +
Sbjct: 119 KAIFWFNESNIDMLSPEQQEAYCFRLAYSLLQIGDMEKARGYFARIEQIGTKYREASTYY 178
Query: 203 RGEYVAAIPRFQLVLANYSDAE----HAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
A ++ L ++ + + E ++ + + Y ++ + YP
Sbjct: 179 VAYIDYATGKYNNALVEFTRLKDLPDYKERSLYYITQIYFIQNKYEKVISEGKELLASYP 238
Query: 259 QGYWARYVETLV 270
V ++
Sbjct: 239 DSENNSEVYRIM 250
Score = 37.9 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 31/232 (13%), Positives = 63/232 (27%), Gaps = 13/232 (5%)
Query: 32 VCFLVGWERQSSRDVYLDS--VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89
+ L + + Q Y ++ A E +P
Sbjct: 38 LFSLKNYSGCIDKLEAYKQHSTDADLIQEADYMLVYSAYEQGR-PNAVELLKDYLDVYPA 96
Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL---------VGMS 140
+ A + + + G+YQ+A E + + +
Sbjct: 97 SRHADEVNFLIGSAHFGQGEYQKAIFWFNESNIDMLSPEQQEAYCFRLAYSLLQIGDMEK 156
Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE-VEIGRY 199
+ + Y ++ T F + I +
Sbjct: 157 ARGYFARIEQIGTKYREASTYYVAYIDYATGKYNNALVEFTRLKDLPDYKERSLYYITQI 216
Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
Y + +Y I + +LA+Y D+E+ E + AY L D+A ++S
Sbjct: 217 YFIQNKYEKVISEGKELLASYPDSENNSEVYRIMGNAYYHLGNEDQAINMLS 268
Score = 36.7 bits (82), Expect = 3.1, Method: Composition-based stats.
Identities = 23/227 (10%), Positives = 64/227 (28%), Gaps = 15/227 (6%)
Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
+R +Y ++ + + K + +P + + + Y G QA ++
Sbjct: 207 ERSLYYITQIYFIQNKYEKVISEGKELLASYPDSENNSEVYRIMGNAYYHLGNEDQAINM 266
Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY---DQRATKLMLQYMSRIVERYTNSP 173
+Y++ D V L + + +
Sbjct: 267 LSKYVSSTDSPLRGDLYILGVCYYNKGNYSSAVNALGRTVRENDALSQNAYLYLGQSYLK 326
Query: 174 YVKGARFYV----------TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
+ + A + + + ++ F+ L ++ ++
Sbjct: 327 LKDKNNARMAFEAAATSSFDKQVKEAAMYNYALLIHETAFTGFGESVTIFEDFLNDFPNS 386
Query: 224 EHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
++A++ LVE Y+ A + I+ P + ++
Sbjct: 387 KYADKVNDYLVEVYLTTKNYQAALNSIDKIKH--PSTKILEAKQDIL 431
>gi|77362059|ref|YP_341633.1| putative lytic cell-wall binding lipoprotein [Pseudoalteromonas
haloplanktis TAC125]
gi|76876970|emb|CAI89187.1| putative lytic cell-wall binding lipoprotein [Pseudoalteromonas
haloplanktis TAC125]
Length = 577
Score = 50.9 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/249 (13%), Positives = 70/249 (28%), Gaps = 17/249 (6%)
Query: 25 TIFFSIAVCFLVGWERQ-----SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
+ +I+ L G + S + V + + R A+ +L N S+A
Sbjct: 4 LLVLTISTLALGGCVTENSYNGSDKPVVENKINSAGAARTRIALALQYLNTGNNSQAK-- 61
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
R +A + A+ G+ + A ++ + P+ N +
Sbjct: 62 -YNLERASEYAPNLPEVHYSLAYYYQQVGENKLADLAYQKALAIKPDDPN--TLNNYGVF 118
Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
D DQ + + R+ + Y N +
Sbjct: 119 LCGIDEYDRATDQFLKAIAIPSYIRVAQSYENLALCAIEFDDFDNAETYFQQAINHSSQR 178
Query: 200 YLKR------GEYVAAIPRFQLVLANYSDAEHA-EEAMARLVEAYVALALMDEAREVVSL 252
+ + + +L Y D A+ + ++EA ++ +
Sbjct: 179 ASTLISLAALYYAKSDLYKASALLKRYDDTAQISPRALLLSYLIKQRMGKIEEAEKIAAT 238
Query: 253 IQERYPQGY 261
I + YP
Sbjct: 239 ILQTYPSSD 247
>gi|255020133|ref|ZP_05292203.1| TPR repeat containing exported protein; Putative periplasmic
protein contains a protein prenylyltransferase domain
[Acidithiobacillus caldus ATCC 51756]
gi|254970426|gb|EET27918.1| TPR repeat containing exported protein; Putative periplasmic
protein contains a protein prenylyltransferase domain
[Acidithiobacillus caldus ATCC 51756]
Length = 276
Score = 50.9 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/79 (27%), Positives = 37/79 (46%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+G+ G+ AAI V Y+ + A EAM RL E Y A +AR V++
Sbjct: 194 YYWLGQAQYVLGQNDAAIKSLSTVENQYAQSSLAPEAMLRLAEVYQATGQATKARAVLNK 253
Query: 253 IQERYPQGYWARYVETLVK 271
+ ++YP A+ + ++
Sbjct: 254 VLKQYPSTPSAQKAQARLQ 272
Score = 42.5 bits (97), Expect = 0.066, Method: Composition-based stats.
Identities = 15/65 (23%), Positives = 27/65 (41%)
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
+ G+Y +A+ Q + Y + A L +A L D A + +S ++ +Y Q
Sbjct: 166 RAGKYGSAVTALQDFIRKYPQSSLVVNAYYWLGQAQYVLGQNDAAIKSLSTVENQYAQSS 225
Query: 262 WARYV 266
A
Sbjct: 226 LAPEA 230
>gi|29345983|ref|NP_809486.1| hypothetical protein BT_0573 [Bacteroides thetaiotaomicron
VPI-5482]
gi|253568616|ref|ZP_04846027.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
gi|298387378|ref|ZP_06996931.1| hypothetical protein HMPREF9007_04151 [Bacteroides sp. 1_1_14]
gi|29337877|gb|AAO75680.1| lipoprotein protein, putative [Bacteroides thetaiotaomicron
VPI-5482]
gi|251842689|gb|EES70769.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
gi|298260047|gb|EFI02918.1| hypothetical protein HMPREF9007_04151 [Bacteroides sp. 1_1_14]
Length = 267
Score = 50.9 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 45/265 (16%), Positives = 88/265 (33%), Gaps = 22/265 (8%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
I +A L + D YE A + + ++++
Sbjct: 1 MKKNIIITLLAAASLTSCGEYNKLLKSTDYEYK-------YEAAKNYFAKGQYNRSATLL 53
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
N+ A +SL M Y+ YQ AA Y YP + + G S
Sbjct: 54 NELITILKGTDKAEESLYMLGMSYYNQKDYQTAAQTFITYFNTYPRGTFTELARFHAGKS 113
Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
+ DQ +T +Q + +E + NS + A+ + +++L KE+ + Y
Sbjct: 114 LFLDTPEPRLDQSSTYQAIQQLQMFMEYFPNSTKKQEAQDMIFALQDKLVLKELYSAKLY 173
Query: 201 LK-----RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD----------E 245
Y + + Q L +Y ++ EE ++ A +A+ E
Sbjct: 174 YNLGNYLGNNYESCVITAQNALKDYPYTDYREELSILILRARHEMAIYSVEDKKMDRYRE 233
Query: 246 AREVVSLIQERYPQGYWARYVETLV 270
+ + +P+ + + E +
Sbjct: 234 TIDEYYAFKNEFPESKYLKEAEKIF 258
>gi|237730723|ref|ZP_04561204.1| tetratricopeptide TPR_2 repeat protein [Citrobacter sp. 30_2]
gi|226906262|gb|EEH92180.1| tetratricopeptide TPR_2 repeat protein [Citrobacter sp. 30_2]
Length = 263
Score = 50.9 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/201 (11%), Positives = 60/201 (29%), Gaps = 14/201 (6%)
Query: 70 EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129
+ NQ + +L + A Q+ + + +
Sbjct: 74 RGQIQENQYQLNQVVERQKQILLQMNNLGSGSAPAAQAAGGDQSGAAATPAPDAGAAAAS 133
Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
V + + D+ ++ +++Y +S Y+ A +++
Sbjct: 134 GAPVQTGDANTDYNAAIALVQDKSRQDDAIEAFQNFIKKYPDSTYLPNANYWLGQLNYNK 193
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
K+ A F V+ N+ + A +AM ++ ++A+ V
Sbjct: 194 GKKD--------------DAAFYFASVVKNFPKSPKAADAMYKVGVIMQDKGDKEKAKAV 239
Query: 250 VSLIQERYPQGYWARYVETLV 270
+ +YP A+ + +
Sbjct: 240 YQQVITKYPGTDGAKQAQKRL 260
>gi|312171771|emb|CBX80029.1| Hypothetical protein ybgF precursor [Erwinia amylovora ATCC
BAA-2158]
Length = 259
Score = 50.9 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 16/119 (13%), Positives = 39/119 (32%), Gaps = 14/119 (11%)
Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
+++ + V++Y S Y A +++ K+ A
Sbjct: 151 EKKQYDSAISAFQTFVKKYPESTYQPNANYWLGQLNYNKGKKD--------------DAA 196
Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
F V+ Y + + +A+ ++ +A+ V + + YP A+ +
Sbjct: 197 YYFATVVKMYPKSPKSADALFKVGVIMQEKGDKAKAKAVYQQVIKLYPDSEAAKTAQKR 255
Score = 47.1 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 14/70 (20%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
++ +Y +AI FQ + Y ++ + A L + D+A + + + YP+
Sbjct: 151 EKKQYDSAISAFQTFVKKYPESTYQPNANYWLGQLNYNKGKKDDAAYYFATVVKMYPKSP 210
Query: 262 WARYVETLVK 271
+ + L K
Sbjct: 211 --KSADALFK 218
>gi|238797728|ref|ZP_04641222.1| hypothetical protein ymoll0001_12360 [Yersinia mollaretii ATCC
43969]
gi|238718369|gb|EEQ10191.1| hypothetical protein ymoll0001_12360 [Yersinia mollaretii ATCC
43969]
Length = 257
Score = 50.9 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
++ +Y AI FQ + Y + + A L + Y D+A +++ + YP+
Sbjct: 149 EKKQYDQAITAFQGFVKQYPKSTYQPNANYWLGQLYYNKGKKDDAAYYYAVVVKNYPKSP 208
Query: 262 WARYVETLVK 271
+ E + K
Sbjct: 209 --KSSEAMFK 216
Score = 50.6 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/120 (15%), Positives = 44/120 (36%), Gaps = 14/120 (11%)
Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
+++ + V++Y S Y A +++ K+ A
Sbjct: 149 EKKQYDQAITAFQGFVKQYPKSTYQPNANYWLGQLYYNKGKKD--------------DAA 194
Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
+ +V+ NY + + EAM ++ D+A+ V + ++YP A+ + +
Sbjct: 195 YYYAVVVKNYPKSPKSSEAMFKVGVIMQDKGQSDKAKAVYQQVIKQYPNTDAAKQAQKRL 254
>gi|238785871|ref|ZP_04629839.1| hypothetical protein yberc0001_38270 [Yersinia bercovieri ATCC
43970]
gi|238713241|gb|EEQ05285.1| hypothetical protein yberc0001_38270 [Yersinia bercovieri ATCC
43970]
Length = 260
Score = 50.9 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
++ +Y AI FQ + Y + + A L + Y D+A +++ + YP+
Sbjct: 152 EKKQYDQAITAFQGFVKQYPKSTYQPNANYWLGQLYYNKGKKDDAAYYYAVVVKNYPKSP 211
Query: 262 WARYVETLVK 271
+ E + K
Sbjct: 212 --KSSEAMFK 219
Score = 50.6 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/120 (15%), Positives = 44/120 (36%), Gaps = 14/120 (11%)
Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
+++ + V++Y S Y A +++ K+ A
Sbjct: 152 EKKQYDQAITAFQGFVKQYPKSTYQPNANYWLGQLYYNKGKKD--------------DAA 197
Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
+ +V+ NY + + EAM ++ D+A+ V + ++YP A+ + +
Sbjct: 198 YYYAVVVKNYPKSPKSSEAMFKVGVIMQDKGQSDKAKAVYQQVIKQYPNTDAAKQAQKRL 257
>gi|116878341|ref|YP_355439.2| hypothetical protein Pcar_0006 [Pelobacter carbinolicus DSM 2380]
gi|114842977|gb|ABA87269.2| conserved hypothetical protein [Pelobacter carbinolicus DSM 2380]
Length = 283
Score = 50.9 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/211 (13%), Positives = 69/211 (32%), Gaps = 22/211 (10%)
Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
+++Y +A +++ + A +P ++LL++ + + Q A L
Sbjct: 44 AQKLYRRAEKHIEKGAYRTAVSQLRSLHDHYPATETGARALLLAGDILLLHLRQDQEALL 103
Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
+ + + Q+ Y + L +I+
Sbjct: 104 SFLLVERDYPDTAWSQR------ARRQVADIYKYRLQDYGRALVAYQKIL---------- 147
Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
Q + EI Y + + F+ ++ Y ++ EA+ R+ A
Sbjct: 148 ------DGPSTQREIVQYEIADTYFRMNNFEQTRIEFESLINEYPESSLLPEALYRIGCA 201
Query: 237 YVALALMDEAREVVSLIQERYPQGYWARYVE 267
++ + +A +V+ + YP+ +A
Sbjct: 202 FMLEGNLSDAVQVLQRLCRDYPEHSFALEGY 232
>gi|319638157|ref|ZP_07992920.1| periplasmic protein [Neisseria mucosa C102]
gi|317400430|gb|EFV81088.1| periplasmic protein [Neisseria mucosa C102]
Length = 251
Score = 50.9 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 12/81 (14%), Positives = 27/81 (33%)
Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
+ + + G + I + ++ A +AM + + L D AR
Sbjct: 169 RNMYLLLQSQQRLGNCESVIEIGNRYANRFRNSPQAPDAMYSIGQCQYKLQQKDIARSTW 228
Query: 251 SLIQERYPQGYWARYVETLVK 271
+ + +P A+ +K
Sbjct: 229 RKLMQSFPNSEAAKRAAISLK 249
>gi|268590334|ref|ZP_06124555.1| putative tol-pal system protein YbgF [Providencia rettgeri DSM
1131]
gi|291314243|gb|EFE54696.1| putative tol-pal system protein YbgF [Providencia rettgeri DSM
1131]
Length = 263
Score = 50.9 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/203 (10%), Positives = 57/203 (28%), Gaps = 14/203 (6%)
Query: 68 LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127
+ ++ NQ + + ++ + P +
Sbjct: 72 MLRGQIQESEYKLNQVIERQKDLYMQLDNAGGGNSATSGDTATPDTSASNGSSSSATPTA 131
Query: 128 KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
+ A + + + + ++ Y S Y A +++
Sbjct: 132 AANTGGNEKDDYNAAVKLAMESKSKAQIDQAIGALQGFIKAYPKSGYQSNANYWLGQLNY 191
Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
+K+ A F V+ Y ++ + EA+ ++ D+A+
Sbjct: 192 NKGSKD--------------DAAFYFATVVKQYPKSQKSSEALYKVGLIMQDKGQKDKAK 237
Query: 248 EVVSLIQERYPQGYWARYVETLV 270
V + ++YP ++ E +
Sbjct: 238 AVYQQVLKQYPNSAGSKLAEKKL 260
>gi|301308217|ref|ZP_07214171.1| TPR-domain containing protein [Bacteroides sp. 20_3]
gi|300833687|gb|EFK64303.1| TPR-domain containing protein [Bacteroides sp. 20_3]
Length = 999
Score = 50.9 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 35/220 (15%), Positives = 62/220 (28%), Gaps = 22/220 (10%)
Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
Y Y + K + + +A F Q + + Q
Sbjct: 500 NTDMYALAHYNLGYSYFKLKEYGEALNRFRQYVNLESNQQTPAYADAYNRIGDCLFHNRQ 559
Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
A + + DY Y G + M R++ +
Sbjct: 560 FAMAEENYTRAAQLQPSAGDYSVYQKGFLLGLQKDYKGK--------ISVMDRLIREFPE 611
Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231
S YV A F E GR Y+ AA F+ ++ ++ + A +A
Sbjct: 612 SQYVDDALF--------------EKGRSYVLLDNNQAAAASFEQLMRDFPQSSLARKAGV 657
Query: 232 RLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+L Y ++A + + YP A+ +K
Sbjct: 658 QLGLIYFNDNQPEKAADAYKSVISNYPGSEEAKVALQDLK 697
Score = 42.1 bits (96), Expect = 0.091, Method: Composition-based stats.
Identities = 23/252 (9%), Positives = 62/252 (24%), Gaps = 14/252 (5%)
Query: 28 FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87
I +C +VG S + Y ++ + +N+S + +
Sbjct: 4 ILIPLCLVVGSHMASGQRSY-----QFDAPNRLFVEGKELFSLKNYSGCIDKLEAYKQHS 58
Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY-----YLVGMSYA 142
A + +++ M + Y G+ L + + + + Y
Sbjct: 59 TDADLIQEADYMLVYSAYEQGRLNAVELLKDYLDVYPASRHADEVNFLIGSAHFGLGEYQ 118
Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
+ I Q + +
Sbjct: 119 KAIFWFNESNIDMLSPEQQEAYCFRLAYSLLQTGDMEKARGYFARIEQIGTKYREASTYY 178
Query: 203 RGEYVAAIPRFQLVLANYSD----AEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
A ++ L ++ +++ E ++ + + Y ++ + YP
Sbjct: 179 VAYIDYATGKYNNALVEFTRLKDLSDYKERSLYYITQIYFIQNKYEKVISEGKELLASYP 238
Query: 259 QGYWARYVETLV 270
V ++
Sbjct: 239 DSENNSEVYRIM 250
Score = 37.9 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 31/232 (13%), Positives = 64/232 (27%), Gaps = 13/232 (5%)
Query: 32 VCFLVGWERQSSRDVYLDS--VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89
+ L + + Q Y ++ + A E +P
Sbjct: 38 LFSLKNYSGCIDKLEAYKQHSTDADLIQEADYMLVYSAYEQGRLN-AVELLKDYLDVYPA 96
Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL---------VGMS 140
+ A + + + G+YQ+A E + + +
Sbjct: 97 SRHADEVNFLIGSAHFGLGEYQKAIFWFNESNIDMLSPEQQEAYCFRLAYSLLQTGDMEK 156
Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV-TVGRNQLAAKEVEIGRY 199
+ + Y ++ T F + I +
Sbjct: 157 ARGYFARIEQIGTKYREASTYYVAYIDYATGKYNNALVEFTRLKDLSDYKERSLYYITQI 216
Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
Y + +Y I + +LA+Y D+E+ E + AY L D+A ++S
Sbjct: 217 YFIQNKYEKVISEGKELLASYPDSENNSEVYRIMGNAYYHLGNEDQAINMLS 268
Score = 36.7 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 26/227 (11%), Positives = 73/227 (32%), Gaps = 15/227 (6%)
Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
+R +Y ++ + + K + +P + + + Y G QA ++
Sbjct: 207 ERSLYYITQIYFIQNKYEKVISEGKELLASYPDSENNSEVYRIMGNAYYHLGNEDQAINM 266
Query: 117 GEEYITQYPESKNVD--------YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
+Y++ D Y + + R V + ++ Y+ + +
Sbjct: 267 LSKYVSSTDSPLRGDLYILGVCYYNKGNYSSAVNALGRTVRENDALSQNAYLYLGQSYLK 326
Query: 169 YTNSP-----YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
+ + A + A + + + ++ F+ L ++ ++
Sbjct: 327 LKDKNNARMAFEAAATSSFDKQVKEAAMYNYALLIHETAFTGFGESVTIFEDFLNDFPNS 386
Query: 224 EHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
++A++ LVE Y+ A + I+ P + ++
Sbjct: 387 KYADKVNDYLVEVYLTTKNYQAALNSIDKIKH--PSTKILEAKQDIL 431
>gi|85858811|ref|YP_461013.1| TPR repeat-containing protein [Syntrophus aciditrophicus SB]
gi|85721902|gb|ABC76845.1| tetratricopeptide repeat domain protein [Syntrophus aciditrophicus
SB]
Length = 836
Score = 50.9 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 34/200 (17%), Positives = 64/200 (32%), Gaps = 21/200 (10%)
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
+ A + N+ +AY + R +P + + L + Y G++ A Y
Sbjct: 273 FRLAECLEQAGNYEEAYAAYEDVIRKYPTSRYKQDVLYKMGEILYRTGRFTHAIEKLRNY 332
Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
+ YP+ +L+G + + + + + A
Sbjct: 333 LAGYPDGPYASRSSFLLGY---------------------CFQQTGRQTDGALWYRNALN 371
Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
A ++G +Y A F L Y + + AM L ++ L
Sbjct: 372 KWDNFEELPADVLYDLGLTLFSWQDYSRAASLFATYLNLYPEGGSKKSAMFYLGRSFYTL 431
Query: 241 ALMDEAREVVSLIQERYPQG 260
A +V SL+ E YP+
Sbjct: 432 NRFASALKVFSLLLENYPES 451
Score = 41.7 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 15/96 (15%), Positives = 32/96 (33%)
Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234
K R++ + + G Y A ++ V+ Y + + ++ + ++
Sbjct: 254 YKHILRRYPDLRSRNDLVNFRLAECLEQAGNYEEAYAAYEDVIRKYPTSRYKQDVLYKMG 313
Query: 235 EAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
E A E + YP G +A L+
Sbjct: 314 EILYRTGRFTHAIEKLRNYLAGYPDGPYASRSSFLL 349
Score = 35.9 bits (80), Expect = 5.6, Method: Composition-based stats.
Identities = 26/244 (10%), Positives = 59/244 (24%), Gaps = 32/244 (13%)
Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
DV T Q +Y+ + + F+ A E +P A +S + +
Sbjct: 293 EDVIRKYPTSRYKQDVLYKMGEILYRTGRFTHAIEKLRNYLAGYPDGPYASRSSFLLGYC 352
Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV--------------- 148
G+ A + ++ + + +D
Sbjct: 353 FQQTGRQTDGALWYRNALNKWDNFEELPADVLYDLGLTLFSWQDYSRAASLFATYLNLYP 412
Query: 149 ---------------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
Y L+ S ++E Y S + ++
Sbjct: 413 EGGSKKSAMFYLGRSFYTLNRFASALKVFSLLLENYPESGEAYESILFMANIGVMEPTMN 472
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+ Y + + + + E + + A EA ++ +
Sbjct: 473 FNVCMTGWD--YYRNPVGTYDWMRRKFPGGRLEEWLLYQKGYALWKAGRCKEAFDLYCHL 530
Query: 254 QERY 257
+ Y
Sbjct: 531 LDSY 534
>gi|262382545|ref|ZP_06075682.1| TPR repeat-containing protein [Bacteroides sp. 2_1_33B]
gi|262295423|gb|EEY83354.1| TPR repeat-containing protein [Bacteroides sp. 2_1_33B]
Length = 999
Score = 50.9 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 36/220 (16%), Positives = 62/220 (28%), Gaps = 22/220 (10%)
Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
Y Y + K + + +A F Q + + Q
Sbjct: 500 NTDMYALAHYNLGYSYFKLKEYGEALNRFRQYVNMESNQQTPAYADAYNRIGDCLFHNRQ 559
Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
A + + DY Y G + M R++ +
Sbjct: 560 FAMAEENYTRAAQLQPSAGDYSVYQKGFLLGLQKDYKGK--------ISVMDRLIREFPE 611
Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231
S YV A F E GR Y+ AA F+ ++ ++ + A +A
Sbjct: 612 SQYVDDALF--------------EKGRSYVLLDNNQAAAASFEQLMRDFPQSSLARKAGV 657
Query: 232 RLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+L Y ++A E + YP A+ +K
Sbjct: 658 QLGLIYFNDNQPEKAAEAYKSVISNYPGSEEAKVALQDLK 697
Score = 40.9 bits (93), Expect = 0.20, Method: Composition-based stats.
Identities = 22/252 (8%), Positives = 60/252 (23%), Gaps = 14/252 (5%)
Query: 28 FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87
I +C +VG S + Y ++ + +N+S + +
Sbjct: 4 ILIPLCLVVGSHMASGQRSY-----QFDAPNRLFVEGKELFSLKNYSGCIDKLEAYKQHS 58
Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY-----YLVGMSYA 142
+ +++ M + Y G+ L + + + + Y
Sbjct: 59 TDVDLIQEADYMLVYSAYEQGRPNAVELLKDYLDVYPASRHADEVNFLIGSAHFGQGEYQ 118
Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
+ I Q + +
Sbjct: 119 KAIFWFNESNIDMLSPEQQEAYCFRLAYSLLQTGDMEKARGYFARIEQIGTKYREASTYY 178
Query: 203 RGEYVAAIPRFQLVLANYSDAE----HAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
A ++ L ++ + + E ++ + + Y ++ + YP
Sbjct: 179 VAYIDYATGKYNNALVEFTRLKDLPDYKERSLYYITQIYFIQNKYEKVISEGKELLASYP 238
Query: 259 QGYWARYVETLV 270
V ++
Sbjct: 239 DSENNSEVYRIM 250
Score = 36.7 bits (82), Expect = 3.1, Method: Composition-based stats.
Identities = 22/227 (9%), Positives = 63/227 (27%), Gaps = 15/227 (6%)
Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
+R +Y ++ + + K + +P + + + Y QA ++
Sbjct: 207 ERSLYYITQIYFIQNKYEKVISEGKELLASYPDSENNSEVYRIMGNAYYHLRNEDQAINM 266
Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY---DQRATKLMLQYMSRIVERYTNSP 173
+Y++ D V L + + +
Sbjct: 267 LSKYVSSTDSPLRGDLYILGVCYYNKGNYSSAVNALGRTVRENDALSQNAYLYLGQSYLK 326
Query: 174 YVKGARFYV----------TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
+ + A + + + ++ F+ L ++ ++
Sbjct: 327 LKDKNNARMAFEAAATSSFDKQVKEAAMYNYALLIHETAFTGFGESVTIFEDFLNDFPNS 386
Query: 224 EHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
++A++ LVE Y+ A + I+ P + ++
Sbjct: 387 KYADKVNDYLVEVYLTTKNYQAALNSIDKIKH--PSTKILEAKQDIL 431
>gi|313157937|gb|EFR57343.1| tetratricopeptide repeat protein [Alistipes sp. HGB5]
Length = 994
Score = 50.9 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/236 (10%), Positives = 70/236 (29%), Gaps = 14/236 (5%)
Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM---SA 101
+ +V+ + + + + +++ A +N + P + L
Sbjct: 453 ESAAINVSPKYSALNSFWQGEIAFAQGDYTVAAAKYNAYLKRAPRSEKEYAMALYNLGYC 512
Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
+ + + + D L + Y+ + + L
Sbjct: 513 AFSRMDMAQARGSFEKFLAVYPARDRYRADACNRLGDIRYSDREFEAAVAEYDRAAALGG 572
Query: 162 MSRIVERYT-----------NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
+ +Y + + E+GR ++ + +Y
Sbjct: 573 PEKYYAQYKRAVTLGILGRTEQKQQALRQIIAAGEGDYADEASYELGRSHIAQEQYAEGA 632
Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
+ + +A+Y + +A++ L AY+ L +++ ++ E PQ A+
Sbjct: 633 AQLEKFVADYPSSPRRAQALSDLGLAYLNLGDKEKSLRYYDMVVETAPQSSEAKGA 688
Score = 39.4 bits (89), Expect = 0.60, Method: Composition-based stats.
Identities = 31/229 (13%), Positives = 60/229 (26%), Gaps = 9/229 (3%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
+Y K+ + E + +A + F R + V LL F + +
Sbjct: 168 PQSEYADHALYYKSYIDYAEGRYGRAKQGFTALQRSDAYRDVVPYYLLQIEFHEGNYRYV 227
Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR-------ATKLMLQYMS 163
+ + + + D
Sbjct: 228 VENGGKLVQRAVPERRKELERVIAESWFRLGDFNKTIEHLDAFAAAGGELDRDGSYLMGF 287
Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
+ + R + YL+ G+ AA+ F + + DA
Sbjct: 288 SLYRTARYPEAAEYLRRACGAEDALTQNASYHLADCYLRAGDKRAAMHTFAMAADDRFDA 347
Query: 224 EHAEEAMARLVEAYVAL--ALMDEAREVVSLIQERYPQGYWARYVETLV 270
AE+A+ + L + A V++ E+YP TL+
Sbjct: 348 TIAEDALFNYGKLQYELGGGAFNGAINVLTRYVEQYPSSPRVGEARTLL 396
>gi|161504088|ref|YP_001571200.1| tol-pal system protein YbgF [Salmonella enterica subsp. arizonae
serovar 62:z4,z23:-- str. RSK2980]
gi|160865435|gb|ABX22058.1| hypothetical protein SARI_02186 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 262
Score = 50.9 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/121 (16%), Positives = 42/121 (34%), Gaps = 14/121 (11%)
Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
D+ + +++Y +S Y A +++ K+ A
Sbjct: 153 QDKSRQDDAIVAFQNFIKKYPDSTYQPNANYWLGQLNYNKGKKD--------------DA 198
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
F V+ NY + A +AM ++ M +A+ V + +YP A+ +
Sbjct: 199 AYYFASVVKNYPKSPKAADAMYKVGVIMQDKGDMAKAKAVYQQVINKYPGTDGAKQAQKR 258
Query: 270 V 270
+
Sbjct: 259 L 259
Score = 50.6 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 23/74 (31%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ AI FQ + Y D+ + A L + D+A +
Sbjct: 145 YNAAIALVQDKSRQDDAIVAFQNFIKKYPDSTYQPNANYWLGQLNYNKGKKDDAAYYFAS 204
Query: 253 IQERYPQGYWARYV 266
+ + YP+ A
Sbjct: 205 VVKNYPKSPKAADA 218
>gi|220903667|ref|YP_002478979.1| tol-pal system protein YbgF [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219867966|gb|ACL48301.1| tol-pal system protein YbgF [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 325
Score = 50.6 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/199 (13%), Positives = 58/199 (29%), Gaps = 14/199 (7%)
Query: 73 FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132
+ +A A V ++G+ A G + P+ +
Sbjct: 138 YGQAAAGTVAAGSTGYAASVPEGVQPYGGQAAGASGQVPAQAPDGSTWGQPSPQPQPQVQ 197
Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
V Y+ R + + ++ Y A+F
Sbjct: 198 VPQKDISLALFDAGVNAYNARKYDEAQRSFTDFLKNYKGHNLASEAQF------------ 245
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ Y +R ++ A + V+ Y + A A + ++ L A+ +
Sbjct: 246 --YLAECYFQRNQFADAALSYDKVIKEYPKSSSAPGAYLKQGISFSKLNQSAAAKARLEE 303
Query: 253 IQERYPQGYWARYVETLVK 271
+ ++YP A +T +K
Sbjct: 304 LIKKYPNSPEAARAKTFLK 322
>gi|108760033|ref|YP_631571.1| TPR repeat-containing protein [Myxococcus xanthus DK 1622]
gi|108463913|gb|ABF89098.1| tetratricopeptide repeat protein [Myxococcus xanthus DK 1622]
Length = 1219
Score = 50.6 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 14/125 (11%), Positives = 35/125 (28%), Gaps = 6/125 (4%)
Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE------IGRYYLKRGE 205
ML +S + + Y ++ + AA +
Sbjct: 148 NPQKAEMLYRLSELYWEKSKYLYQLEMTRFLAAEKEYDAAVARGEKVEPPKKNHADSERY 207
Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
+ ++ +L Y D +E + + Y L ++A + +P+ +
Sbjct: 208 RTETMGIYEDILRAYPDYPQRDEVLFSMGYNYYELGRREDAVARYEELIRDFPKSQFVPD 267
Query: 266 VETLV 270
+
Sbjct: 268 AYIQL 272
Score = 41.7 bits (95), Expect = 0.10, Method: Composition-based stats.
Identities = 31/215 (14%), Positives = 72/215 (33%), Gaps = 12/215 (5%)
Query: 45 DVYLDSVTDVRYQREV-YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
DVY+ + + + ++ Y+ AV+ +F A F + FP +R + ++ +V
Sbjct: 637 DVYVKLYPNTQDEIDLRYQAAVILYDRSHFVDAARRFGEIIEKFPEERRSRDAADLTMYV 696
Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
S ++ + +L ++++ +K V + K
Sbjct: 697 LESREEWLELNTLSKKFLENKKLAKPGTDFAVRVSRVVEGSQYKWVDEVVYKKE------ 750
Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY-LKRGEYVAAIPRFQLVLANYSD 222
+ + RF +++ A + + + GE + + L Y
Sbjct: 751 ----KNPKKAAEEFLRFVSDFPKSENADRALTYAMVIAQEAGEIDKGLAAGERFLKEYPR 806
Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
+ +A L Y +A +A + + Y
Sbjct: 807 SPFELKARYSLAGLYEKVAEYRKAAVMAESLVASY 841
>gi|168230634|ref|ZP_02655692.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|168238900|ref|ZP_02663958.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|194471411|ref|ZP_03077395.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194736266|ref|YP_002113857.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|200389992|ref|ZP_03216603.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|194457775|gb|EDX46614.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194711768|gb|ACF90989.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|197288322|gb|EDY27703.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|199602437|gb|EDZ00983.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|205334782|gb|EDZ21546.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|322615816|gb|EFY12734.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|322621375|gb|EFY18231.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|322623632|gb|EFY20470.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|322628906|gb|EFY25687.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|322634884|gb|EFY31614.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|322636588|gb|EFY33292.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|322641773|gb|EFY38407.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|322647829|gb|EFY44309.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|322651361|gb|EFY47743.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|322652662|gb|EFY49011.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|322658643|gb|EFY54904.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|322664928|gb|EFY61119.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|322668403|gb|EFY64559.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|322670509|gb|EFY66642.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|322675249|gb|EFY71325.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|322679675|gb|EFY75716.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|322684849|gb|EFY80848.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|323191724|gb|EFZ76977.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|323200618|gb|EFZ85693.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|323202289|gb|EFZ87337.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|323205442|gb|EFZ90408.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|323212130|gb|EFZ96955.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
gi|323216149|gb|EGA00878.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|323221360|gb|EGA05779.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|323226783|gb|EGA10974.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|323230997|gb|EGA15113.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|323234170|gb|EGA18259.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|323238135|gb|EGA22193.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|323243570|gb|EGA27588.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|323251394|gb|EGA35266.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|323260622|gb|EGA44231.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|323264693|gb|EGA48195.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|323270957|gb|EGA54392.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
Length = 262
Score = 50.6 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/121 (15%), Positives = 41/121 (33%), Gaps = 14/121 (11%)
Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
D+ + +++Y +S Y A +++ K+ A
Sbjct: 153 QDKSRQDDAIVAFQNFIKKYPDSTYQPNANYWLGQLNYNKGKKD--------------DA 198
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
F V+ NY + A +AM ++ +A+ V + +YP A+ +
Sbjct: 199 AYYFASVVKNYPKSPKAADAMYKVGVIMQDKGDTAKAKAVYQQVINKYPGTDGAKQAQKR 258
Query: 270 V 270
+
Sbjct: 259 L 259
Score = 50.2 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 23/74 (31%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ AI FQ + Y D+ + A L + D+A +
Sbjct: 145 YNAAIALVQDKSRQDDAIVAFQNFIKKYPDSTYQPNANYWLGQLNYNKGKKDDAAYYFAS 204
Query: 253 IQERYPQGYWARYV 266
+ + YP+ A
Sbjct: 205 VVKNYPKSPKAADA 218
>gi|16759689|ref|NP_455306.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|29142538|ref|NP_805880.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|167554284|ref|ZP_02348025.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|213427707|ref|ZP_03360457.1| hypothetical protein SentesTyphi_20229 [Salmonella enterica subsp.
enterica serovar Typhi str. E02-1180]
gi|213582021|ref|ZP_03363847.1| hypothetical protein SentesTyph_12824 [Salmonella enterica subsp.
enterica serovar Typhi str. E98-0664]
gi|213857529|ref|ZP_03384500.1| hypothetical protein SentesT_20489 [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
gi|25340111|pir||AB0593 probable exported protein STY0796 [imported] - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|16501982|emb|CAD05212.1| putative exported protein [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29138169|gb|AAO69740.1| putative exported protein [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|205321484|gb|EDZ09323.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
Length = 262
Score = 50.6 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/121 (15%), Positives = 41/121 (33%), Gaps = 14/121 (11%)
Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
D+ + +++Y +S Y A +++ K+ A
Sbjct: 153 QDKSRQDDAIVAFQNFIKKYPDSTYQPNANYWLGQLNYNKGKKD--------------DA 198
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
F V+ NY + A +AM ++ +A+ V + +YP A+ +
Sbjct: 199 AYYFASVVKNYPKSPKAADAMYKVGVIMQDKGDTAKAKAVYQQVINKYPGTDGAKQAQKR 258
Query: 270 V 270
+
Sbjct: 259 L 259
Score = 50.2 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 23/74 (31%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ AI FQ + Y D+ + A L + D+A +
Sbjct: 145 YNAAIALVQDKSRQDDAIVAFQNFIKKYPDSTYQPNANYWLGQLNYNKGKKDDAAYYFAS 204
Query: 253 IQERYPQGYWARYV 266
+ + YP+ A
Sbjct: 205 VVKNYPKSPKAADA 218
>gi|88810550|ref|ZP_01125807.1| hypothetical protein NB231_15758 [Nitrococcus mobilis Nb-231]
gi|88792180|gb|EAR23290.1| hypothetical protein NB231_15758 [Nitrococcus mobilis Nb-231]
Length = 275
Score = 50.6 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/201 (10%), Positives = 55/201 (27%), Gaps = 2/201 (0%)
Query: 73 FSKAYEYFNQCSRDFPF-AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
+S + + P + + + + + G ++
Sbjct: 68 YSDVDSRLRELEQSGPDPSSKRESNSSAAKAPKRAHGDKPPPTEGAPDHGVTPNGDAQQK 127
Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
G + + + + + + F +Q A
Sbjct: 128 KNQPADGNQTRGQNGNTIDSSEEQTAYERAFNTLRDGRYARSQQEFHEFLHHYPDSQYAD 187
Query: 192 KEVEI-GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
G Y + A+ +FQ VL ++ + A ++ +D AR+ +
Sbjct: 188 NARYWLGESYYVERHFDQAMQQFQKVLDDFPHSGKRPGAQLKIGFIQHEQGKLDRARKTL 247
Query: 251 SLIQERYPQGYWARYVETLVK 271
+ +RYP A + ++
Sbjct: 248 GKVIQRYPNSTAANLAQQRLR 268
Score = 39.8 bits (90), Expect = 0.40, Method: Composition-based stats.
Identities = 14/95 (14%), Positives = 37/95 (38%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
+ D ++ YE+A L++ ++++ + F++ +P + A + Y
Sbjct: 143 NTIDSSEEQTAYERAFNTLRDGRYARSQQEFHEFLHHYPDSQYADNARYWLGESYYVERH 202
Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
+ QA ++ + +P S +G +
Sbjct: 203 FDQAMQQFQKVLDDFPHSGKRPGAQLKIGFIQHEQ 237
>gi|258591278|emb|CBE67575.1| exported protein of unknown function [NC10 bacterium 'Dutch
sediment']
Length = 419
Score = 50.6 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 17/86 (19%), Positives = 37/86 (43%), Gaps = 2/86 (2%)
Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
R + A + +G+Y AI F+ + Y ++ A L E+Y + D+
Sbjct: 294 RTESAGELYRNALNDYAKGDYELAISGFRSQIELYPNSSLLPNARYWLGESYYSQKQYDQ 353
Query: 246 AREVVSLIQERYPQGYWARYVETLVK 271
A +++ +++P+ + L+K
Sbjct: 354 AVTEFAVLVKQHPEHP--KAASALLK 377
Score = 41.7 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 12/78 (15%), Positives = 37/78 (47%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+G Y + +Y A+ F +++ + + A A+ + A++ + + R V+
Sbjct: 338 RYWLGESYYSQKQYDQAVTEFAVLVKQHPEHPKAASALLKQGFAHLEMGDKPKGRTVLDR 397
Query: 253 IQERYPQGYWARYVETLV 270
+ +++P+ +R+ + +
Sbjct: 398 LLKQFPKSQESRWAKERL 415
Score = 38.2 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 19/125 (15%), Positives = 39/125 (31%)
Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
E+Y A+ + ++ A F +P + + + YS
Sbjct: 290 KPAIRTESAGELYRNALNDYAKGDYELAISGFRSQIELYPNSSLLPNARYWLGESYYSQK 349
Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
+Y QA + + Q+PE G ++ +M +L+ Q+ R
Sbjct: 350 QYDQAVTEFAVLVKQHPEHPKAASALLKQGFAHLEMGDKPKGRTVLDRLLKQFPKSQESR 409
Query: 169 YTNSP 173
+
Sbjct: 410 WAKER 414
>gi|213027104|ref|ZP_03341551.1| hypothetical protein Salmonelentericaenterica_33679 [Salmonella
enterica subsp. enterica serovar Typhi str. 404ty]
Length = 262
Score = 50.6 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/121 (15%), Positives = 41/121 (33%), Gaps = 14/121 (11%)
Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
D+ + +++Y +S Y A +++ K+ A
Sbjct: 153 QDKSRQDDAIVAFQNFIKKYPDSTYQPNANYWLGQLNYNKGKKD--------------DA 198
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
F V+ NY + A +AM ++ +A+ V + +YP A+ +
Sbjct: 199 AYYFASVVKNYPKSPKAADAMYKVGVIMQDKGDTAKAKAVYQQVINKYPGTDGAKQAQKR 258
Query: 270 V 270
+
Sbjct: 259 L 259
Score = 50.2 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 23/74 (31%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ AI FQ + Y D+ + A L + D+A +
Sbjct: 145 YNAAIALVQDKSRQDDAIVAFQNFIKKYPDSTYQPNANYWLGQLNYNKGKKDDAAYYFAS 204
Query: 253 IQERYPQGYWARYV 266
+ + YP+ A
Sbjct: 205 VVKNYPKSPKAADA 218
>gi|308389544|gb|ADO31864.1| putative periplasmic protein [Neisseria meningitidis alpha710]
gi|325130519|gb|EGC53274.1| putative lipoprotein [Neisseria meningitidis OX99.30304]
gi|325201863|gb|ADY97317.1| putative lipoprotein [Neisseria meningitidis M01-240149]
gi|325208385|gb|ADZ03837.1| putative lipoprotein [Neisseria meningitidis NZ-05/33]
Length = 238
Score = 50.6 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 14/82 (17%), Positives = 29/82 (35%)
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
+ + + G + I + D+ A EA+ ++ E L D AR
Sbjct: 155 QRSMYLLLQSRARMGNCESVIEIGGRYANRFKDSPTAPEAIFKIGECQYRLQQKDIARAT 214
Query: 250 VSLIQERYPQGYWARYVETLVK 271
+ + YP A+ + ++
Sbjct: 215 WRSLIQAYPGSPAAKRAASAIR 236
>gi|265754620|ref|ZP_06089672.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|263234734|gb|EEZ20302.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
Length = 967
Score = 50.6 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 34/226 (15%), Positives = 71/226 (31%), Gaps = 22/226 (9%)
Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
+ S Y +Y + K++N+ A +F + A ++ +
Sbjct: 460 EFATSKDGQEYGLALYNLGYTYFKQKNYGNAGTWFTRFVDRGSANERAMQADAYNRIGDC 519
Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
+ + + + + DY Y Q ++R+
Sbjct: 520 NFYDRRFEQARQDYARAVEIDPSLGDYSLYQEAFVRGLQRDYNGKVQT--------LNRL 571
Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
+ Y S Y+ A + E GR +++ + AI RF +++ + ++
Sbjct: 572 ISDYPESQYMDDALY--------------EQGRAFVQMEDNANAIARFNILVKKFPESSV 617
Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
A A + Y EA + + YP AR + +K
Sbjct: 618 ARRAANEIGLLYYQDDKYPEAIQAYKQVIASYPGSEEARLAQRDLK 663
Score = 47.1 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 19/233 (8%), Positives = 66/233 (28%), Gaps = 6/233 (2%)
Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKE----QNFSKAYEYFNQCSRDFPFAGVARKSL 97
++ L + + +++A+ F + +++A + R + R
Sbjct: 391 EAKQKILFRLGTQAFANARFQEALEFFNQSLAVGQYNQATKADAYFWRGESNYRLDRFPQ 450
Query: 98 LMSAFVQY-SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
+ + Y + G + R ++
Sbjct: 451 AGNDYRLYLEFATSKDGQEYGLALYNLGYTYFKQKNYGNAGTWFTRFVDRGSANERAMQA 510
Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK-RGEYVAAIPRFQL 215
+ + L + + + +Y +
Sbjct: 511 DAYNRIGDCNFYDRRFEQARQDYARAVEIDPSLGDYSLYQEAFVRGLQRDYNGKVQTLNR 570
Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
++++Y ++++ ++A+ A+V + A +++ +++P+ AR
Sbjct: 571 LISDYPESQYMDDALYEQGRAFVQMEDNANAIARFNILVKKFPESSVARRAAN 623
Score = 39.4 bits (89), Expect = 0.48, Method: Composition-based stats.
Identities = 19/223 (8%), Positives = 59/223 (26%), Gaps = 15/223 (6%)
Query: 61 YEKAVLFLKEQNFSKA---YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
Y ++L + N+ +A + + + + + F
Sbjct: 177 YYIGEIYLVKGNYQQARTVAKAYLEQYPAKKDVPQMERIWGEACFGLNDYQAAIPPLERY 236
Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE---------- 167
E ++ + + + L + +
Sbjct: 237 RESVSHPQRKPLYELGMSYYYTGVYSKAVATLGEMASVHDALSQNAYLHMGLAYLNLKER 296
Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
+ + A F + A + + + ++ F+ L + ++ + E
Sbjct: 297 NRARMAFEQAANFSFDPKVKEQALYNYALCIHETSYSPFAESVTVFERFLNEFPNSPYTE 356
Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
L+E Y+ + A + ++ I+ P + ++
Sbjct: 357 RVNDYLIEVYMNTRSYEAALKSIAKIEH--PGTRIMEAKQKIL 397
Score = 35.9 bits (80), Expect = 5.8, Method: Composition-based stats.
Identities = 31/235 (13%), Positives = 59/235 (25%), Gaps = 10/235 (4%)
Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF-----AGVARKSLLMS 100
L V+ + VY A + E+ + KA + F D + + L+
Sbjct: 128 TLLKEVSPLYQDDAVYNLAYIDYVEKRYDKALKSFQSLQNDAVYAALVPYYIGEIYLVKG 187
Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
+ Q + E + + L A + + +
Sbjct: 188 NYQQARTVAKAYLEQYPAKKDVPQMERIWGEACFGLNDYQAAIPPLERYRESVSHPQRKP 247
Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY---YLKRGEYVAAIPRFQLVL 217
+ Y Y K + A + YL E A F+
Sbjct: 248 LYELGMSYYYTGVYSKAVATLGEMASVHDALSQNAYLHMGLAYLNLKERNRARMAFEQAA 307
Query: 218 ANYSDAEHAEEAMARLVEAYVALAL--MDEAREVVSLIQERYPQGYWARYVETLV 270
D + E+A+ + E+ V +P + V +
Sbjct: 308 NFSFDPKVKEQALYNYALCIHETSYSPFAESVTVFERFLNEFPNSPYTERVNDYL 362
>gi|42522225|ref|NP_967605.1| hypothetical protein Bd0635 [Bdellovibrio bacteriovorus HD100]
gi|39574756|emb|CAE78598.1| conserved hypothetical protein [Bdellovibrio bacteriovorus HD100]
Length = 223
Score = 50.6 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 16/106 (15%), Positives = 38/106 (35%)
Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
+ N+ + A Q E + + + ++ +I FQ
Sbjct: 114 LNAEVNALRAEKAAVQAEKSAKQAKRDAFEAAQEFFGKKDWKQSILNFQKYRDENPKGPK 173
Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+A ++ ++ L + DEA+ + ++P+ AR + +K
Sbjct: 174 FADATYKIGVSFQELGMKDEAKTFYDEVVSKFPKSEEARRAKIRLK 219
>gi|283850381|ref|ZP_06367670.1| tol-pal system protein YbgF [Desulfovibrio sp. FW1012B]
gi|283574407|gb|EFC22378.1| tol-pal system protein YbgF [Desulfovibrio sp. FW1012B]
Length = 317
Score = 50.6 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/121 (16%), Positives = 45/121 (37%), Gaps = 14/121 (11%)
Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
++ + + L + SP + A F+ G Y + G++ A
Sbjct: 209 FNAKQYQQALGIFQEFARNFKTSPLMPNALFWT--------------GECYFQLGDFANA 254
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
+Q V+ Y + +A+ + A+ L A+ + ++YP +A +T+
Sbjct: 255 ALSYQEVVEKYPKSAKHADALFKRGVAFQKLGNAGAAKLSFKEVIDKYPDSAFAARAKTM 314
Query: 270 V 270
+
Sbjct: 315 M 315
Score = 48.3 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 28/78 (35%), Gaps = 2/78 (2%)
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
G +Y A+ FQ N+ + A+ E Y L A +
Sbjct: 202 YAKGLASFNAKQYQQALGIFQEFARNFKTSPLMPNALFWTGECYFQLGDFANAALSYQEV 261
Query: 254 QERYPQGYWARYVETLVK 271
E+YP+ A++ + L K
Sbjct: 262 VEKYPKS--AKHADALFK 277
>gi|297182618|gb|ADI18777.1| DNA uptake lipoprotein [uncultured gamma proteobacterium
HF4000_36I10]
Length = 104
Score = 50.6 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 9/39 (23%), Positives = 22/39 (56%)
Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
+A+A +V+AY+ L + D A +++++ +P+
Sbjct: 2 PQTSAVPDALAVMVQAYLLLGMDDLADRSLTVLRSNFPK 40
>gi|83814353|ref|YP_445962.1| TPR repeat-containing protein [Salinibacter ruber DSM 13855]
gi|83755747|gb|ABC43860.1| tetratricopeptide repeat domain protein [Salinibacter ruber DSM
13855]
Length = 627
Score = 50.6 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/216 (12%), Positives = 62/216 (28%), Gaps = 2/216 (0%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
+ Y++ + + + +A F++ + + + +A ++ A + + G++
Sbjct: 402 PETTAAEEGQYQRGRIAVLRDSLDRARLLFSRLAANAQSSDLADQAQYELALLHFYQGEF 461
Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
A+ D + + A+ + R + Y
Sbjct: 462 DATAARAASISENPSADVANDAIALKTLLQEARGPDSLDTPLRTF--ARVRLHERQHAYG 519
Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
+ A +L R + AA+ F+ V + + A+ ++
Sbjct: 520 RALDSLDALLRRHPRHPLADDARFRRANIHLARHDTSAALTAFRAVPERHPRSPFADRSL 579
Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
R A A E + YP A
Sbjct: 580 FRSASLLEANGRPAAAVETYDRLLSEYPTSLLAGDA 615
Score = 39.8 bits (90), Expect = 0.43, Method: Composition-based stats.
Identities = 21/114 (18%), Positives = 39/114 (34%), Gaps = 7/114 (6%)
Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
+ I E+Y S A+ + A + + Y A ++ L
Sbjct: 301 ATRACEAIQEQYPRSGVAPEAQKLRGDLYRRWADQGADSTTAAQDSVRYARARTAYKTFL 360
Query: 218 ANYSDAEHAEEAMARL----VEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
A+ RL ++AY L D+A+E +S + +P+ A +
Sbjct: 361 RENPGHADYPAALLRLGTLQIDAYRNL---DDAQETLSQLVSNHPETTAAEEGQ 411
>gi|288818733|ref|YP_003433081.1| DNA uptake lipoprotein [Hydrogenobacter thermophilus TK-6]
gi|288788133|dbj|BAI69880.1| DNA uptake lipoprotein [Hydrogenobacter thermophilus TK-6]
gi|308752320|gb|ADO45803.1| outer membrane assembly lipoprotein YfiO [Hydrogenobacter
thermophilus TK-6]
Length = 298
Score = 50.6 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 45/225 (20%), Positives = 94/225 (41%), Gaps = 9/225 (4%)
Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85
I F + + G + + + E Y++ ++ +++SKA E + +
Sbjct: 4 ILFITLLALVFGCAKMTEEKRA-------KLAIEYYQEGMVAYANRDYSKAVERLKEALK 56
Query: 86 DFPF--AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
+ + + A Y Y A E+++ YP+ + Y+++ SY +
Sbjct: 57 YLENLTPQQIKDAKYVIAESYYMNKDYINAVVYFEDFLFYYPDVSESEKAYFMLVDSYMK 116
Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
+ D DQ T + + + ++ SPY + R + + +LA E IGR+Y
Sbjct: 117 VAPDPYRDQTYTLKAIDKVKDFLSKFPQSPYAERVRAIMEDAQRKLARHEYLIGRFYEDF 176
Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
G Y +A R++ +L NY + E R +++ + + L + +E
Sbjct: 177 GYYYSASLRYRDLLINYPEQVSDVEVSFRYIKSLLLVRLQAKRQE 221
>gi|283784495|ref|YP_003364360.1| tetratricopeptide repeat exported protein [Citrobacter rodentium
ICC168]
gi|282947949|emb|CBG87513.1| putative tetratricopeptide repeat exported protein [Citrobacter
rodentium ICC168]
Length = 263
Score = 50.6 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/209 (15%), Positives = 64/209 (30%), Gaps = 14/209 (6%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
+A + ++ NQ + +SL SAG Q A+ G
Sbjct: 66 NQADIDSLRGQIQESQYQLNQVVERQKQILLQIESLSSGGAAAQSAGGEQSGAAAGAATA 125
Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
T + V + + D+ + +++Y +S Y A ++
Sbjct: 126 TPDAPASGAVPVQSGDANTDYNAAIALVQDKSRQDDAIAAFQNFIKKYPDSTYQPNANYW 185
Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
+ K+ A F V+ NY + A +AM ++
Sbjct: 186 LGQLNYNKGKKD--------------DAAYYFASVVKNYPKSPKAADAMFKVGVIMQDKG 231
Query: 242 LMDEAREVVSLIQERYPQGYWARYVETLV 270
+A+ V + +YP A+ + +
Sbjct: 232 DTAKAKAVYQQVISKYPGTDGAKQAQKRL 260
>gi|319790450|ref|YP_004152083.1| tol-pal system protein YbgF [Thermovibrio ammonificans HB-1]
gi|317114952|gb|ADU97442.1| tol-pal system protein YbgF [Thermovibrio ammonificans HB-1]
Length = 233
Score = 50.6 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/250 (13%), Positives = 65/250 (26%), Gaps = 22/250 (8%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
L G Q + + KA + ++ S E
Sbjct: 1 MKKAVFAALFTAAVLAGCAPQQGAKTDFNQLEAQIQAL----KAQVEGNQRRLSSVEERV 56
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
++ L +S + + G
Sbjct: 57 SKLEDKTASNEQQIFDLKKECENVKQTLSQISVSS----APSAPVGGSSSKQTVVQFGAK 112
Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
+ Q ++V++Y +S A ++ IG Y
Sbjct: 113 DLYRQAFDAMEAGNFDKAQQLFEQLVQQYPDSDLADNALYW--------------IGEIY 158
Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
+Y A FQ V+ Y + AM +L Y + +A+E++ + ++YP
Sbjct: 159 YSHNDYQTAANYFQQVIDKYPNGNKVPAAMLKLALCYRGMGNTQKAKEILKEVIDKYPGT 218
Query: 261 YWARYVETLV 270
A + +
Sbjct: 219 PEASIAKVKL 228
>gi|330901399|gb|EGH32818.1| competence lipoprotein ComL, putative [Pseudomonas syringae pv.
japonica str. M301072PT]
Length = 167
Score = 50.2 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 36/68 (52%)
Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
E+ + YYL R YVAA R + V+ N+ + + +A +VE+Y L L D A +
Sbjct: 2 YEIHVADYYLTRQAYVAAANRGRYVVENFQETPSVGDGLAVMVESYQRLHLDDLAATSLE 61
Query: 252 LIQERYPQ 259
+++ YP
Sbjct: 62 VLKTNYPN 69
>gi|213619386|ref|ZP_03373212.1| outer membrane protein assembly complex subunit YfiO [Salmonella
enterica subsp. enterica serovar Typhi str. E98-2068]
Length = 132
Score = 50.2 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/118 (16%), Positives = 39/118 (33%), Gaps = 7/118 (5%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + + + FL E+Y A L++ N+ +A
Sbjct: 1 MTRMKYLVAAATLSLFLASCSGSKEE-------VPDNPPNEIYATAQQKLQDGNWKQAIT 53
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
+PF +++ L + Y A + + ++ P N+DYV Y+
Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFMRLNPTHPNIDYVMYM 111
>gi|313886707|ref|ZP_07820417.1| outer membrane assembly lipoprotein YfiO [Porphyromonas
asaccharolytica PR426713P-I]
gi|312923869|gb|EFR34668.1| outer membrane assembly lipoprotein YfiO [Porphyromonas
asaccharolytica PR426713P-I]
Length = 270
Score = 50.2 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 42/224 (18%), Positives = 80/224 (35%), Gaps = 15/224 (6%)
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
Y A + E +S+ E + ++L + A + AA
Sbjct: 37 YSYAKKYYNEGKYSRVAELMVDVLPHYEGTQEGAQALYIMADALLQNKQESSAAEYFRRL 96
Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
T+YP+ +Y G++ ++ D DQ T L+ + +E Y + + K
Sbjct: 97 YTKYPQDPRATEAHYKTGLALYRIAPDPRLDQSVTYSALKELQSFLETYPQNEHRKEVEQ 156
Query: 181 YVTVGRNQLAAKEVEIGRYYLK-----RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
+ ++ LA KE+ Y Y++AI + L +Y +H E+ + +VE
Sbjct: 157 MLFDLQDNLAKKELNTADLYYNLGTYLGNNYISAIITARNALKSYPYTKHREDLLFIIVE 216
Query: 236 AYV----------ALALMDEAREVVSLIQERYPQGYWARYVETL 269
A + E + + +P G + +TL
Sbjct: 217 ASYQQAINSVESKKQGRLREVIDAYYNYENAFPDGKHIKRAKTL 260
Score = 35.2 bits (78), Expect = 9.3, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 31/89 (34%)
Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
Y+ + +++ + Y G+Y VL +Y + +A+ + +A
Sbjct: 21 CAEYMRIQKSKDPTLRYSYAKKYYNEGKYSRVAELMVDVLPHYEGTQEGAQALYIMADAL 80
Query: 238 VALALMDEAREVVSLIQERYPQGYWARYV 266
+ A E + +YPQ A
Sbjct: 81 LQNKQESSAAEYFRRLYTKYPQDPRATEA 109
>gi|157146632|ref|YP_001453950.1| tol-pal system protein YbgF [Citrobacter koseri ATCC BAA-895]
gi|157083837|gb|ABV13515.1| hypothetical protein CKO_02398 [Citrobacter koseri ATCC BAA-895]
Length = 262
Score = 50.2 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/121 (15%), Positives = 41/121 (33%), Gaps = 14/121 (11%)
Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
D+ + +++Y +S Y A +++ K+ A
Sbjct: 153 QDKSRQDDAIVAFQNFIKKYPDSTYQPNANYWLGQLNYNKGKKD--------------DA 198
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
F V+ NY + A +AM ++ +A+ V + +YP A+ +
Sbjct: 199 AFYFASVVKNYPKSPKAADAMYKVGVIMQDKGDAAKAKAVYQQVISKYPGTDGAKQAQKR 258
Query: 270 V 270
+
Sbjct: 259 L 259
Score = 49.4 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 23/74 (31%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ AI FQ + Y D+ + A L + D+A +
Sbjct: 145 YNAAIALVQDKSRQDDAIVAFQNFIKKYPDSTYQPNANYWLGQLNYNKGKKDDAAFYFAS 204
Query: 253 IQERYPQGYWARYV 266
+ + YP+ A
Sbjct: 205 VVKNYPKSPKAADA 218
>gi|189459860|ref|ZP_03008645.1| hypothetical protein BACCOP_00490 [Bacteroides coprocola DSM 17136]
gi|189433470|gb|EDV02455.1| hypothetical protein BACCOP_00490 [Bacteroides coprocola DSM 17136]
Length = 1007
Score = 50.2 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 31/213 (14%), Positives = 71/213 (33%), Gaps = 22/213 (10%)
Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
+Y K++ + KA +F +C+ + + + + + A+ +
Sbjct: 511 ALYNLGYTAFKQKQYDKALTWFTRCAESGIRLENDVVADVYNRMGDCNFYARRFDAADAQ 570
Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
DY + QR ++ ++R++ + S Y+ A
Sbjct: 571 YAQASGYSMSLSDYS--------LFQQSIIKGLQREYGKKIELLNRLITGFPESQYLDDA 622
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
+ E GR +++ + A+ R+ L++ Y ++ + A + Y
Sbjct: 623 LY--------------EQGRAFVQLEDNDNAVKRYSLLVQRYPESPLSRRAANEIGLLYY 668
Query: 239 ALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+EA + YP AR + +K
Sbjct: 669 QNDKYNEAIAAYKKVISTYPGSEEARLAQRDLK 701
>gi|325295382|ref|YP_004281896.1| tol-pal system protein YbgF [Desulfurobacterium thermolithotrophum
DSM 11699]
gi|325065830|gb|ADY73837.1| tol-pal system protein YbgF [Desulfurobacterium thermolithotrophum
DSM 11699]
Length = 242
Score = 50.2 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 34/252 (13%), Positives = 60/252 (23%), Gaps = 15/252 (5%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ KF + F I + L +
Sbjct: 1 MRKF---LIFPIFSFLFFSCAQNQQPVNTGILELKKEID----------LIKTKVELNSR 47
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+ F + + +
Sbjct: 48 KVSSLESRISQVEDKSAENEQQIFELKRKLEDVEKTVSSITVPSPSVSPTVPSSPSSNEE 107
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
+ Q I D+ K M S + K Y A IG
Sbjct: 108 KTEEQQIVIQVSDKDLYKQAFNSMEAGDLETAKSTFEKLVEQYPDSPLADNALY--WIGE 165
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
Y +Y A F+ V+ Y + AM +L +Y + +D+A+E+ + E+YP
Sbjct: 166 IYYSHNDYETAANYFKQVIEKYPNGNKVPAAMLKLALSYKGMGELDKAKEMFQQVIEKYP 225
Query: 259 QGYWARYVETLV 270
A + +
Sbjct: 226 NTPEAGIAKAKL 237
>gi|282878378|ref|ZP_06287170.1| outer membrane assembly lipoprotein YfiO [Prevotella buccalis ATCC
35310]
gi|281299564|gb|EFA91941.1| outer membrane assembly lipoprotein YfiO [Prevotella buccalis ATCC
35310]
Length = 282
Score = 50.2 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 54/274 (19%), Positives = 94/274 (34%), Gaps = 26/274 (9%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ L +I V L G VY + T+ R YE A + +++A
Sbjct: 1 MSMKKLFFISTICVALLFGSCASEFNAVYKSTDTNYR-----YEYAKECFFKGKYTRAIT 55
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
N A++SL M A QY +G Y+ AA + Y+ YP+ K + Y VG
Sbjct: 56 LLNDLIVVQKGTENAQESLYMLAMAQYKSGDYESAAQAFKRYVQSYPKGKYAELASYYVG 115
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
S + DQ T + ++ + ++ A+ + +++L KE+ +
Sbjct: 116 ESLFMCTPEPRLDQSQTVSAIASFQEFLDLFPDAKLKNSAQNRLFELQDKLVKKELYSAQ 175
Query: 199 YYLK-----------RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL----- 242
Y Y A I + L +Y + E ++++ LA
Sbjct: 176 LYYDLGPYFGNCTSGGNNYEACIITAENALKDYPYSSLRENFAVLVMKSKFELAEQSVEE 235
Query: 243 -----MDEAREVVSLIQERYPQGYWARYVETLVK 271
+A + YP E +K
Sbjct: 236 KRLERYQDAEDECYGFINEYPDSKQRPLAEKFIK 269
>gi|332290666|ref|YP_004429275.1| Tetratricopeptide TPR_1 repeat-containing protein [Krokinobacter
diaphorus 4H-3-7-5]
gi|332168752|gb|AEE18007.1| Tetratricopeptide TPR_1 repeat-containing protein [Krokinobacter
diaphorus 4H-3-7-5]
Length = 1006
Score = 50.2 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/249 (10%), Positives = 68/249 (27%), Gaps = 21/249 (8%)
Query: 39 ERQSSRDVYLDSVTDVRYQREVYEK-----AVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93
+ + L + Y+K + E N+ +A F + ++
Sbjct: 403 SKNYKEAMRLLESNSNFDNKVAYQKVAFLYGLDLYNEGNYPEAAAAFKKSLKEPRDPLYV 462
Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153
++ A Y A +++A ++++ + +Y ++YA
Sbjct: 463 TRATYWKAESDYVANDFKEAIIGYKQFLNNSNAANTPEYQDINYNLAYAYFSDKQYEQAA 522
Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR- 212
+ + N Y++ + A + + A +
Sbjct: 523 TVFESYTASNVQDQSKLNDAYLRLGDSRFISSKYWPALEAYNKSIALNMTDQDYATFQKS 582
Query: 213 ---------------FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
Q + ++ + ++A+ L YV+ D+A +
Sbjct: 583 MSYGFIKKDEDKISGLQTFSTKFPNSTYRDDALYELGNIYVSQNKNDQAITAYDKLVRDL 642
Query: 258 PQGYWARYV 266
P +
Sbjct: 643 PGSSYVSKA 651
Score = 37.1 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 24/221 (10%), Positives = 56/221 (25%), Gaps = 23/221 (10%)
Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
++ YQ Y A + ++ + +A F + +
Sbjct: 491 NNSNAANTPEYQDINYNLAYAYFSDKQYEQAATVFESYTASNVQDQSKLNDAYLRLGDSR 550
Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
A + + + + +
Sbjct: 551 FISSKYWPALEAYN---------KSIALNMTDQDYATFQKSMSYGFIKKDEDKISGLQTF 601
Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
++ NS Y A + E+G Y+ + + AI + ++ + + +
Sbjct: 602 STKFPNSTYRDDALY--------------ELGNIYVSQNKNDQAITAYDKLVRDLPGSSY 647
Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
+AM + DEA ++ + YP A
Sbjct: 648 VSKAMLKKALILDNKNKSDEALALLRKVAGDYPGTPEALQA 688
Score = 35.5 bits (79), Expect = 8.3, Method: Composition-based stats.
Identities = 23/206 (11%), Positives = 51/206 (24%), Gaps = 6/206 (2%)
Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
T + + + K F +A +Y N+ + A+ + A+ +
Sbjct: 134 TAGEKETFYFNNGYAYFKSNRFDEAKKYLNRVRDSKKYGTQAKYYIGFMAYEGDEYEEAN 193
Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
+ E + L + K S + +
Sbjct: 194 ELFEEVEAETGGAYNEDLAYFKADLNFKLGKFDEAISEGKSQLAKANPTEKSELNKIIGE 253
Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRY-YLKRGEYVAAIPRFQLVLANYS-----DAEH 225
S + + K + Y + G + + ++ +
Sbjct: 254 SYFNQKRYAEALPYLQAYKGKRGKWNNTDYYQLGYTYYKQGDYANAINEFNKIIDGNNSV 313
Query: 226 AEEAMARLVEAYVALALMDEAREVVS 251
A+ L E+Y+ L EA
Sbjct: 314 AQNGYYHLAESYLKLDKKQEALNAFK 339
>gi|332300044|ref|YP_004441965.1| outer membrane assembly lipoprotein YfiO [Porphyromonas
asaccharolytica DSM 20707]
gi|332177107|gb|AEE12797.1| outer membrane assembly lipoprotein YfiO [Porphyromonas
asaccharolytica DSM 20707]
Length = 270
Score = 50.2 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 41/224 (18%), Positives = 79/224 (35%), Gaps = 15/224 (6%)
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
Y A + E + + E + ++L + A + AA
Sbjct: 37 YSYAKKYYNEGKYGRVAELMVDVLPHYEGTQEGAQALYIMADALLQNKQESSAAEYFRRL 96
Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
T+YP+ +Y G++ ++ D DQ T L+ + +E Y + + K
Sbjct: 97 YTKYPQDPRATEAHYKTGLALYRIAPDPRLDQSVTYSALKELQSFLETYPQNEHRKEVEQ 156
Query: 181 YVTVGRNQLAAKEVEIGRYYLK-----RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
+ ++ LA KE+ Y Y++AI + L +Y +H E+ + +VE
Sbjct: 157 MLFDLQDNLAKKELNTADLYYNLGTYLGNNYISAIITARNALKSYPYTKHREDLLFIIVE 216
Query: 236 AYV----------ALALMDEAREVVSLIQERYPQGYWARYVETL 269
A + E + + +P G + +TL
Sbjct: 217 ASYQQAINSVESKKQGRLREVIDAYYNYENAFPDGKHIKRAKTL 260
Score = 35.5 bits (79), Expect = 8.9, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 31/89 (34%)
Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
Y+ + +++ + Y G+Y VL +Y + +A+ + +A
Sbjct: 21 CAEYMRIQKSKDPTLRYSYAKKYYNEGKYGRVAELMVDVLPHYEGTQEGAQALYIMADAL 80
Query: 238 VALALMDEAREVVSLIQERYPQGYWARYV 266
+ A E + +YPQ A
Sbjct: 81 LQNKQESSAAEYFRRLYTKYPQDPRATEA 109
>gi|258647913|ref|ZP_05735382.1| putative lipoprotein [Prevotella tannerae ATCC 51259]
gi|260851749|gb|EEX71618.1| putative lipoprotein [Prevotella tannerae ATCC 51259]
Length = 280
Score = 50.2 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 40/270 (14%), Positives = 88/270 (32%), Gaps = 26/270 (9%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
+ + ++ D D YE A + + ++++ +
Sbjct: 1 MRNFILTIAALGCFLFASCGDYDKVDKTPDYTYK-------YEAAKQYFAQGYYNRSAQT 53
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
Q F +SL + +A Y AA+ Y YP+ + Y GM
Sbjct: 54 LQQVISVFKGTEAGEESLFLLGMANLNARNYDAAATYLRRYYQSYPKGLYTEAARYYTGM 113
Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
+ + DQ AT + +E + S + A+ + +++L KE +
Sbjct: 114 ALYLSTPEPKLDQSATYEAVTEFQNFIETFPTSIFRSQAQDRIFELQDKLVEKEYLSAKL 173
Query: 200 YLK---------RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL-------- 242
Y G Y A I + + ++ + E+ +++A A
Sbjct: 174 YYDLGDYFLNGGNGNYQACIVTSENAIKDFPYTKRREDFAYLILKAKYEYAKHSVPEKQT 233
Query: 243 --MDEAREVVSLIQERYPQGYWARYVETLV 270
++A + Q +P+ + + + ++
Sbjct: 234 ERYNDAVDEYYGFQSEFPESKYMKEAKDMI 263
>gi|253990431|ref|YP_003041787.1| tol-pal system protein YbgF [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253781881|emb|CAQ85045.1| conserved hypothetical protein [Photorhabdus asymbiotica]
Length = 255
Score = 50.2 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 15/69 (21%), Positives = 25/69 (36%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ EY AI FQ + NY + + A L + + DEA +
Sbjct: 138 YDAAVHLAVNSKEYDKAIVSFQSFVKNYPKSSYIPNANYWLGQLHYNKGKKDEAAYYFAT 197
Query: 253 IQERYPQGY 261
+ + YP+
Sbjct: 198 VVKEYPKSQ 206
Score = 47.9 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 19/120 (15%), Positives = 42/120 (35%), Gaps = 14/120 (11%)
Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
+ + + V+ Y S Y+ A +++ K+ A
Sbjct: 147 NSKEYDKAIVSFQSFVKNYPKSSYIPNANYWLGQLHYNKGKKD--------------EAA 192
Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
F V+ Y ++ + E++ ++ D+AR V + ++YP A+ E +
Sbjct: 193 YYFATVVKEYPKSQKSGESLYKVGLIMQDKGQKDKARSVYQQVMKQYPGSNVAKLAEKKL 252
>gi|254490096|ref|ZP_05103288.1| type IV pilus biogenesis/stability protein PilW [Methylophaga
thiooxidans DMS010]
gi|224464684|gb|EEF80941.1| type IV pilus biogenesis/stability protein PilW [Methylophaga
thiooxydans DMS010]
Length = 256
Score = 50.2 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 17/248 (6%), Positives = 56/248 (22%), Gaps = 3/248 (1%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K + + + L + + + + +++ +++ A E
Sbjct: 1 MSKGVQSWVLMVVILALTACNTTGGTRPEYVAPDPKAAEINM-RLGLNYMQRGDYAIALE 59
Query: 79 YFNQCSRDFPFAGVARKSLLM-SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
+ + P A ++ + + E N
Sbjct: 60 KLQKALKQNPNLPSAHNTIALLHQRLGEDDKAEAHFLEAVERAPEYSEAQNNFGVFLCQQ 119
Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
G R + + N Q+ +
Sbjct: 120 GRYQDAETRFLKAVENPLYNSKAMALENAGLCVNRIPDTEKAESYFRKALQIQPTLTKSL 179
Query: 198 RYYLKRGEYVAAIPRFQLVLANYSD-AEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
+ + + + Y + +++ ++ L D +++ R
Sbjct: 180 LQMATISYEQQSYLQARAYIQRYQQASSWTPQSLFLAIKTENKLNDQDAVSSYSLILRSR 239
Query: 257 YPQGYWAR 264
+P +
Sbjct: 240 FPDSDEMQ 247
>gi|204930030|ref|ZP_03221051.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|204321024|gb|EDZ06225.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
Length = 262
Score = 50.2 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/121 (15%), Positives = 41/121 (33%), Gaps = 14/121 (11%)
Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
D+ + +++Y +S Y A +++ K+ A
Sbjct: 153 QDKSRQDDAIVAFQNFIKKYPDSTYQPNANYWLGQLNYNKGKKD--------------DA 198
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
F V+ NY + A +AM ++ +A+ V + +YP A+ +
Sbjct: 199 AYYFASVVKNYPKSPKAADAMYKVGVIMQDKGDTAKAKAVYQQVINKYPGTDGAKQAQKR 258
Query: 270 V 270
+
Sbjct: 259 L 259
Score = 49.8 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 23/74 (31%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ AI FQ + Y D+ + A L + D+A +
Sbjct: 145 YNAAIALVQDKSRQDDAIVAFQNFIKKYPDSTYQPNANYWLGQLNYNKGKKDDAAYYFAS 204
Query: 253 IQERYPQGYWARYV 266
+ + YP+ A
Sbjct: 205 VVKNYPKSPKAADA 218
>gi|297539674|ref|YP_003675443.1| tol-pal system protein YbgF [Methylotenera sp. 301]
gi|297259021|gb|ADI30866.1| tol-pal system protein YbgF [Methylotenera sp. 301]
Length = 282
Score = 50.2 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 14/104 (13%), Positives = 37/104 (35%)
Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
++ ++ A +G Y +AI Q V+ + ++
Sbjct: 173 KHKDAFNAYDKFLKDYPNSTLAAEATYGLGYSQFALKNYKSAIATQQKVIDLHPESPKVP 232
Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+AM + + + L L+ A++ + + ++P + +K
Sbjct: 233 DAMLNMANSQIQLGLVPGAKKTLRDLIAQFPNSEVTPTAQKRLK 276
Score = 38.6 bits (87), Expect = 0.98, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 29/78 (37%)
Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243
+N + +E+ K ++ A + L +Y ++ A EA L + AL
Sbjct: 152 PAKNTQEYQLLELANGLSKESKHKDAFNAYDKFLKDYPNSTLAAEATYGLGYSQFALKNY 211
Query: 244 DEAREVVSLIQERYPQGY 261
A + + +P+
Sbjct: 212 KSAIATQQKVIDLHPESP 229
>gi|289548801|ref|YP_003473789.1| outer membrane assembly lipoprotein YfiO [Thermocrinis albus DSM
14484]
gi|289182418|gb|ADC89662.1| outer membrane assembly lipoprotein YfiO [Thermocrinis albus DSM
14484]
Length = 301
Score = 50.2 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 47/252 (18%), Positives = 90/252 (35%), Gaps = 10/252 (3%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
K I F + + L + + +++Y + + +++ KA E
Sbjct: 1 MKNRNLIGFFLLLLLLGSCAKVTEEKRAKI-------AQDLYSEGMAAYASRDYGKAIER 53
Query: 80 FNQCSRDFPF--AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
+ R + + A Y Y A E+++ YP + +Y +
Sbjct: 54 LKEALRYLENLTPSQIKDAKYAIADSYYMKKDYVNAVVYLEDFVASYPGLPETERAFYQL 113
Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
SY ++ D DQ T L + +Y +SPY + +LA + I
Sbjct: 114 VDSYMKVAPDAYRDQSYTLKALDKAREFLSKYPSSPYADKVGDLIQQAVEKLAKHQYLIA 173
Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL-ALMDEAREVVSLIQER 256
R+Y G Y +A R++ +L NY + E R + + + + D+ +E + E
Sbjct: 174 RFYEDYGYYYSAALRYRDLLINYPEQISDAEVSYRYIRSLLLVRKQADKRKEYYQGLIED 233
Query: 257 YPQGYWARYVET 268
+ A E
Sbjct: 234 AYKSLAAARSED 245
>gi|34495566|ref|NP_899781.1| hypothetical protein CV_0111 [Chromobacterium violaceum ATCC 12472]
gi|34101421|gb|AAQ57790.1| conserved hypothetical protein [Chromobacterium violaceum ATCC
12472]
Length = 246
Score = 50.2 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/240 (10%), Positives = 58/240 (24%), Gaps = 8/240 (3%)
Query: 23 ALTIFFSIAVCFLVGWERQSS-RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
S + L G S + + L + + +
Sbjct: 2 KRIAISSALLLILNGCASTSDLEETRRQLAQVNQQASTRISAVESKLSNEKLLEMVSQVD 61
Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
+ + L + ++ L + + + +
Sbjct: 62 ALKAEVAKLRGDVEVLNYNLQ-----TTQKRQNDLYNDLDGRLSHLEGAPGKRDASQAAA 116
Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
Q L + + N+ Q A +G +
Sbjct: 117 QQAAAGDSQASPDYDKALNLLRA--RDFPNAINALSLFIQQNPQAPQAAEASYWLGVAHT 174
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
+Y AAI + + Y + A +A+ + L +D+A+ + + YP+
Sbjct: 175 ALRQYDAAIDIHRRFVEQYPNNHFAPDALRNIGNCQRDLGQVDQAKNTYRRLIKLYPKTD 234
>gi|325300114|ref|YP_004260031.1| Tetratricopeptide TPR_2 repeat-containing protein [Bacteroides
salanitronis DSM 18170]
gi|324319667|gb|ADY37558.1| Tetratricopeptide TPR_2 repeat-containing protein [Bacteroides
salanitronis DSM 18170]
Length = 1003
Score = 50.2 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 36/226 (15%), Positives = 71/226 (31%), Gaps = 23/226 (10%)
Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
Y T Y +Y + K++ + +A +F +CS+
Sbjct: 498 EYTPGRTGEEYALALYNLGYVAFKQKQYEQALTWFTRCSQAQVKDRRIVAD--------- 548
Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
+ + +G V QR +Q ++R+
Sbjct: 549 VYNRMGDCHFHARRFAEASALYAQASAADPSLGDYSLFQEAFVKGLQRDYAGKIQTLNRL 608
Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
+ Y SPY+ A + E GR ++++ AI R+ ++L + ++
Sbjct: 609 LTDYPASPYIDDALY--------------EQGRAFVQQENNAGAIERYTVLLQRFPESPL 654
Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+ +A + Y EA + YP AR + +K
Sbjct: 655 SRKASNEIGLLYYQEDKYSEAIAAYKKVISDYPGSEEARLAQRDLK 700
Score = 35.2 bits (78), Expect = 9.8, Method: Composition-based stats.
Identities = 35/221 (15%), Positives = 68/221 (30%), Gaps = 22/221 (9%)
Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
D +YE+ F++++N + A E + + FP + ++RK+ + Y
Sbjct: 611 DYPASPYIDDALYEQGRAFVQQENNAGAIERYTVLLQRFPESPLSRKASNEIGLLYYQED 670
Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
KY +A + ++ I+ YP S + A + + +
Sbjct: 671 KYSEAIAAYKKVISDYPGS---------------------EEARLAQRDLKSIYIDLNRV 709
Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
+V N+ + RGE A F L ++ +
Sbjct: 710 DDYLSFVSTLPGGANFDVNERDSLTYVAAERVYMRGETEEAKASFTRYLQSFPQGAFSVN 769
Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
A L EA + + YP ++ L
Sbjct: 770 ASYYLGLMAYNEKNYTEASAYLDKVLA-YPDNKFSGEAMKL 809
>gi|296120993|ref|YP_003628771.1| hypothetical protein Plim_0726 [Planctomyces limnophilus DSM 3776]
gi|296013333|gb|ADG66572.1| hypothetical protein Plim_0726 [Planctomyces limnophilus DSM 3776]
Length = 496
Score = 49.8 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 32/231 (13%), Positives = 70/231 (30%), Gaps = 9/231 (3%)
Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
+ + E + KA KE F++A F + ++ + + + +L
Sbjct: 74 ASATEDADGDERSLAPIAGSEEFAKAEELFKEGKFAEAESAFKKIAKKYKKSEIREDALF 133
Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
M A + Y A + + +YP S+ +D + + K+
Sbjct: 134 MQAESAFQRQHYADAYDIVAVLLKEYPSSRYLDSISRRLFEIARIW-------LNDPKVA 186
Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
+ + ++ A + + AI + +
Sbjct: 187 QIDEIQQTNLQNPGERLPPPSPVEDKKQSAFALNLFDEKKPVFDPEG--NAIAALRAIWL 244
Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
N A++A+ + + EA SL++E+YP + L
Sbjct: 245 NDPAGPLADDALMLAASHFARRSKWAEADNYFSLLREQYPNSPHVQKAFLL 295
Score = 42.5 bits (97), Expect = 0.061, Method: Composition-based stats.
Identities = 30/177 (16%), Positives = 58/177 (32%), Gaps = 5/177 (2%)
Query: 64 AVLFLKEQNF-----SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
A+ E+ A + P +A +L+++A K+ +A +
Sbjct: 218 ALNLFDEKKPVFDPEGNAIAALRAIWLNDPAGPLADDALMLAASHFARRSKWAEADNYFS 277
Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
QYP S +V + L YD R + Q + Y +
Sbjct: 278 LLREQYPNSPHVQKAFLLGSHVKLMSYEGAGYDGRRLEEARQLKETALRLYPEAEDRARL 337
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
+ A+ E R+Y ++ A +++ Y ++ +A +A L E
Sbjct: 338 EKELAGIEEAEVARLWEQIRFYQRKRRDSAVGLYCHMLIDRYPNSSYAPQARQILNE 394
Score = 37.9 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 15/95 (15%), Positives = 36/95 (37%)
Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
+ A ++E K G++ A F+ + Y +E E+A+ E
Sbjct: 78 EDADGDERSLAPIAGSEEFAKAEELFKEGKFAEAESAFKKIAKKYKKSEIREDALFMQAE 137
Query: 236 AYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
+ +A ++V+++ + YP + + +
Sbjct: 138 SAFQRQHYADAYDIVAVLLKEYPSSRYLDSISRRL 172
>gi|82523886|emb|CAI78609.1| hypothetical protein [uncultured delta proteobacterium]
Length = 275
Score = 49.8 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/261 (8%), Positives = 74/261 (28%), Gaps = 12/261 (4%)
Query: 17 YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76
+ ++ L I C + + + +++ + + + + +
Sbjct: 20 LKNFRIILIILSVFFACSVSSCATRQDVIYLNKQINNLKNRIDQ----LTLEQNKKLDST 75
Query: 77 YEYFNQCSRDF------PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
+ + A + + + S + + + I E
Sbjct: 76 LLPLMEFQSNITPMIESMEADIRLLRGDIESLDHRSNEIEKNIKTFEIKKIKNTDEINID 135
Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
D + ++ + + + + + + + + +Y
Sbjct: 136 DTNIITTNNDHKPIMNFKKFPEDKYAEAKELYDKGLYKESKKAFEDFMGYYPE--DKLTG 193
Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
+ I Y K G+Y +I +Q ++ N+ A + AY + + ++
Sbjct: 194 NSQFWIAEIYFKEGDYKKSIFEYQKLMDNFKGHPKVPSAYLKQGLAYYKIDDSFTGKLIL 253
Query: 251 SLIQERYPQGYWARYVETLVK 271
+ + +P A + +K
Sbjct: 254 EKLIKLFPGTEQANTAKNKLK 274
>gi|296314211|ref|ZP_06864152.1| putative periplasmic protein [Neisseria polysaccharea ATCC 43768]
gi|296839110|gb|EFH23048.1| putative periplasmic protein [Neisseria polysaccharea ATCC 43768]
Length = 237
Score = 49.8 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 15/82 (18%), Positives = 29/82 (35%)
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
+ + + G + I + D+ A EAM ++ E L D AR
Sbjct: 154 QRSMYLLLQSRARMGNCESVIEIGGRYANRFKDSPTAPEAMFKIGECQYRLQQKDIARAT 213
Query: 250 VSLIQERYPQGYWARYVETLVK 271
+ + YP A+ + ++
Sbjct: 214 WLSLIQTYPSSPAAKRAASAIR 235
>gi|238757960|ref|ZP_04619141.1| hypothetical protein yaldo0001_8360 [Yersinia aldovae ATCC 35236]
gi|238703714|gb|EEP96250.1| hypothetical protein yaldo0001_8360 [Yersinia aldovae ATCC 35236]
Length = 260
Score = 49.8 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
++ +Y AI FQ + Y + + A L + Y D+A +++ + YP+
Sbjct: 152 EKKQYDQAITAFQSFVKQYPKSTYQPNANYWLGQLYYNKGKKDDAAYYYAVVVKNYPKSP 211
Query: 262 WARYVETLVK 271
+ E + K
Sbjct: 212 --KSSEAMFK 219
Score = 49.0 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 19/120 (15%), Positives = 44/120 (36%), Gaps = 14/120 (11%)
Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
+++ + V++Y S Y A +++ K+ A
Sbjct: 152 EKKQYDQAITAFQSFVKQYPKSTYQPNANYWLGQLYYNKGKKD--------------DAA 197
Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
+ +V+ NY + + EAM ++ D+A+ V + ++YP A+ + +
Sbjct: 198 YYYAVVVKNYPKSPKSSEAMFKVGVIMQDKGQSDKAKAVYQQVIKQYPNTDAAKQAQKRL 257
>gi|300822969|ref|ZP_07103104.1| tol-pal system protein YbgF [Escherichia coli MS 119-7]
gi|300524510|gb|EFK45579.1| tol-pal system protein YbgF [Escherichia coli MS 119-7]
Length = 190
Score = 49.8 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 24/74 (32%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ A+ FQ + NY D+ + A L + D+A +
Sbjct: 73 YNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDDAAYYFAS 132
Query: 253 IQERYPQGYWARYV 266
+ + YP+ A
Sbjct: 133 VVKNYPKSPKAADA 146
Score = 47.1 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 19/121 (15%), Positives = 41/121 (33%), Gaps = 14/121 (11%)
Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
D+ + ++ Y +S Y+ A +++ K+ A
Sbjct: 81 QDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKD--------------DA 126
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
F V+ NY + A +AM ++ +A+ V + +YP A+ +
Sbjct: 127 AYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKYPGTDGAKQAQKR 186
Query: 270 V 270
+
Sbjct: 187 L 187
>gi|291278704|ref|YP_003495539.1| hypothetical protein DEFDS_0275 [Deferribacter desulfuricans SSM1]
gi|290753406|dbj|BAI79783.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1]
Length = 257
Score = 49.8 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 30/251 (11%), Positives = 70/251 (27%), Gaps = 2/251 (0%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
T + + F + + + S + A L L Q +
Sbjct: 1 MNIKKTFIPVLLLTFTISCAQNNEVIKQSISNLNSDIIDLQKSIAELQLNVQELDRKINV 60
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
++ + A K+ L + + K + T V
Sbjct: 61 NSENIKVNSEAIAKLKTELNDVKYKIDSFKQKTITPNAPTNTTPNNNISTGQTVKPNNNS 120
Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
+ D + + + + + + + Y + A IG
Sbjct: 121 EIIIIEDDSADKTTIYSYAYELYMKGKYFESLNKFNEFLKKYPNDDLSDNAMY--WIGEI 178
Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
Y + +Y+ I + ++ Y +A ++ AY+ + D A + + + + YP
Sbjct: 179 YYSQKDYIKCIDTMKDLIKKYPQGNKVPDAYLKMAYAYIEIGDQDNAVKYLKYLLDNYPA 238
Query: 260 GYWARYVETLV 270
A + +
Sbjct: 239 TRAASLAKQKL 249
>gi|82703825|ref|YP_413391.1| hypothetical protein Nmul_A2712 [Nitrosospira multiformis ATCC
25196]
gi|82411890|gb|ABB75999.1| conserved hypothetical protein [Nitrosospira multiformis ATCC
25196]
Length = 304
Score = 49.8 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 19/128 (14%), Positives = 42/128 (32%), Gaps = 14/128 (10%)
Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
+ K + + + Y S + A+ IG +
Sbjct: 187 YENGYDLFKTGKYKEAISSFNSFLRSYPESSF--------------AASAHYWIGNSFYA 232
Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
E+ A+ + ++ Y D+ +AM + + + L D AR ++ + +YP
Sbjct: 233 LREFKNAVAAQETLIKIYPDSPKVPDAMLNIASSQLELNKKDAARTILESVIVKYPGSDA 292
Query: 263 ARYVETLV 270
A + +
Sbjct: 293 ADKAKRRL 300
Score = 37.5 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 28/75 (37%)
Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
YE K + +A FN R +P + A + Y+ +++ A + E
Sbjct: 186 AYENGYDLFKTGKYKEAISSFNSFLRSYPESSFAASAHYWIGNSFYALREFKNAVAAQET 245
Query: 120 YITQYPESKNVDYVY 134
I YP+S V
Sbjct: 246 LIKIYPDSPKVPDAM 260
>gi|171911019|ref|ZP_02926489.1| TPR repeat [Verrucomicrobium spinosum DSM 4136]
Length = 844
Score = 49.8 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 29/235 (12%), Positives = 62/235 (26%), Gaps = 17/235 (7%)
Query: 34 FLVGWE---------RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
L+ + + + T + + K NF A +Y + +
Sbjct: 606 LLISCQTLREDVDGVSKEIDKYFEARETASVSPAILAWLGERYFKRDNFKAAAKYLVKAT 665
Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
+G + G Y + + Y+ Q PE + G +
Sbjct: 666 TPDNPSGTQGIVWNYLGMAELENGNYDASIRALDFYLAQTPEGASRAKALLTKGHA---- 721
Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204
+++ ++ + G +
Sbjct: 722 ----LLGKKSLDEADACAIEGLQIMKEGRLHAQLQLLQGDVFMARGEVAAPTGDLDGAKA 777
Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
+ A + +V + D E EA + +A L D+A + I+ +YP
Sbjct: 778 AWQKAAGNYVVVSQVFVDPEITPEAAHKAADALDKLGQKDKANSLREQIKTKYPN 832
Score = 40.5 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 15/65 (23%), Positives = 25/65 (38%)
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+ + +Y AI + + Y H EA RL E Y D+A+ + +
Sbjct: 80 YDYATLTYNQQDYKLAIKPYTDYVTTYPLGRHGAEAWFRLGECYYKTKQNDDAKRCYNEV 139
Query: 254 QERYP 258
R+P
Sbjct: 140 LTRFP 144
Score = 36.7 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 24/227 (10%), Positives = 58/227 (25%), Gaps = 21/227 (9%)
Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
Y + ++++K YF + S+ A + + ++A + +
Sbjct: 152 AAYRMGMFSYNAKDYAKGATYFEIAEKLGTNVDFKLGSVFNKALCYKYSNQKEKALTAFK 211
Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
+ + A ++ ++ ++
Sbjct: 212 VVAGVKGGDLQNREFALQEVALGSTELGKKEDAIAAYLEIIGDAKD--DKVLGDALIRSG 269
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY--------------SDAE 224
Y + A K E I + L+ NY +
Sbjct: 270 LLYNETNKPAQALKNFERSLALKDLPSDKKGIAVYGLIQGNYVKGDYDGAIDTYTKNATV 329
Query: 225 HAEE-----AMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
A E + + AY + +A + +I++ +P A
Sbjct: 330 VAPEDLQGKMLLIVGNAYKNKQMYRQAVDTFLVIEKNHPDTKEALEA 376
Score = 36.3 bits (81), Expect = 4.4, Method: Composition-based stats.
Identities = 24/212 (11%), Positives = 57/212 (26%), Gaps = 16/212 (7%)
Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
++Y+ A L +Q++ A + + +P ++ Y + A
Sbjct: 75 PDEDLYDYATLTYNQQDYKLAIKPYTDYVTTYPLGRHGAEAWFRLGECYYKTKQNDDAKR 134
Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML----QYMSRIVERYTN 171
E +T++P + + Y +GM
Sbjct: 135 CYNEVLTRFPRTDSAGLAAYRMGMFSYNAKDYAKGATYFEIAEKLGTNVDFKLGSVFNKA 194
Query: 172 SPYVKGARFYVTVGRNQ------------LAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219
Y + + + E+ + G+ AI + ++ +
Sbjct: 195 LCYKYSNQKEKALTAFKVVAGVKGGDLQNREFALQEVALGSTELGKKEDAIAAYLEIIGD 254
Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
D + +A+ R Y +A +
Sbjct: 255 AKDDKVLGDALIRSGLLYNETNKPAQALKNFE 286
>gi|255534236|ref|YP_003094607.1| lipoprotein protein, putative [Flavobacteriaceae bacterium 3519-10]
gi|255340432|gb|ACU06545.1| lipoprotein protein, putative [Flavobacteriaceae bacterium 3519-10]
Length = 324
Score = 49.8 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 38/223 (17%), Positives = 81/223 (36%), Gaps = 9/223 (4%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K+ + +A L + D + + + A + + ++ A
Sbjct: 1 MKKY---LIVLLAFFALSAC------NRQQDLAMKSADKDYILKVANENFENKKWTDALA 51
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+ + S A + SA+ Y Y+ A + + +P+ + Y+
Sbjct: 52 LYERLSNLVAGTDDAPNVVYNSAYANYYDKNYKLAGHQFKNFSVTFPQDPRAEDAAYMSA 111
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
+ + + D DQ +T+L + + + Y NS K + +L K E R
Sbjct: 112 LCFYEGSMDYNLDQTSTELAINELQNFLNNYPNSEKSKNINELIDELTYKLEFKAYENAR 171
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
Y K +Y AA F+ VL ++ + + + ++ + LA
Sbjct: 172 QYFKMADYKAANVAFENVLYDFPSTKLSPKINEYILRSKYELA 214
>gi|237724975|ref|ZP_04555456.1| conserved hypothetical protein [Bacteroides sp. D4]
gi|229436713|gb|EEO46790.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
Length = 967
Score = 49.8 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 34/226 (15%), Positives = 71/226 (31%), Gaps = 22/226 (9%)
Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
+ S Y +Y + K++N+ A +F + A ++ +
Sbjct: 460 EFATSKDGQEYGLALYNLGYTYFKQKNYGNAGTWFTRFVDRGSANERAMQADAYNRIGDC 519
Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
+ + + + + DY Y Q ++R+
Sbjct: 520 NFYDRRFEQARQDYARAVEIDPSLGDYSLYQEAFVRGLQRDYNGKVQT--------LNRL 571
Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
+ Y S Y+ A + E GR +++ + AI RF +++ + ++
Sbjct: 572 ISDYPESQYMDDALY--------------EQGRAFVQMEDNANAIARFNILVKKFPESNV 617
Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
A A + Y EA + + YP AR + +K
Sbjct: 618 ARRAANEIGLLYYQDDKYPEAIQAYKQVIASYPGSEEARLAQRDLK 663
Score = 47.5 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 19/233 (8%), Positives = 66/233 (28%), Gaps = 6/233 (2%)
Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKE----QNFSKAYEYFNQCSRDFPFAGVARKSL 97
++ L + + +++A+ F + +++A + R + R
Sbjct: 391 EAKQKILFRLGTQAFANARFQEALEFFNQSLAVGQYNQATKADTYFWRGESNYRLDRFPQ 450
Query: 98 LMSAFVQY-SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
+ + Y + G + R ++
Sbjct: 451 AGNDYRLYLEFATSKDGQEYGLALYNLGYTYFKQKNYGNAGTWFTRFVDRGSANERAMQA 510
Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK-RGEYVAAIPRFQL 215
+ + L + + + +Y +
Sbjct: 511 DAYNRIGDCNFYDRRFEQARQDYARAVEIDPSLGDYSLYQEAFVRGLQRDYNGKVQTLNR 570
Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
++++Y ++++ ++A+ A+V + A +++ +++P+ AR
Sbjct: 571 LISDYPESQYMDDALYEQGRAFVQMEDNANAIARFNILVKKFPESNVARRAAN 623
Score = 39.4 bits (89), Expect = 0.51, Method: Composition-based stats.
Identities = 19/223 (8%), Positives = 59/223 (26%), Gaps = 15/223 (6%)
Query: 61 YEKAVLFLKEQNFSKA---YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
Y ++L + N+ +A + + + + + F
Sbjct: 177 YYIGEIYLVKGNYQQARTVAKAYLEQYPAKKDVPQMERIWGEACFGLNDYQAAIPPLERY 236
Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE---------- 167
E ++ + + + L + +
Sbjct: 237 RESVSHPQRKPLYELGMSYYYTGVYSKAAATLGEMASVHDALSQNAYLHMGLAYLNLKER 296
Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
+ + A F + A + + + ++ F+ L + ++ + E
Sbjct: 297 NRARMAFEQAANFSFDPKVKEQALYNYALCIHETSYSPFAESVTVFERFLNEFPNSPYTE 356
Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
L+E Y+ + A + ++ I+ P + ++
Sbjct: 357 RVNDYLIEVYMNTRSYEAALKSIAKIEH--PGTRIMEAKQKIL 397
Score = 35.9 bits (80), Expect = 6.1, Method: Composition-based stats.
Identities = 32/235 (13%), Positives = 60/235 (25%), Gaps = 10/235 (4%)
Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF-----AGVARKSLLMS 100
L V+ + VY A + E+ + KA + F D + + L+
Sbjct: 128 TLLKEVSPLYQDDAVYNLAYIDYVEKRYDKALKSFQSLQNDAVYAALVPYYIGEIYLVKG 187
Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
+ Q + E + + L A + + +
Sbjct: 188 NYQQARTVAKAYLEQYPAKKDVPQMERIWGEACFGLNDYQAAIPPLERYRESVSHPQRKP 247
Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY---YLKRGEYVAAIPRFQLVL 217
+ Y Y K A + A + YL E A F+
Sbjct: 248 LYELGMSYYYTGVYSKAAATLGEMASVHDALSQNAYLHMGLAYLNLKERNRARMAFEQAA 307
Query: 218 ANYSDAEHAEEAMARLVEAYVALAL--MDEAREVVSLIQERYPQGYWARYVETLV 270
D + E+A+ + E+ V +P + V +
Sbjct: 308 NFSFDPKVKEQALYNYALCIHETSYSPFAESVTVFERFLNEFPNSPYTERVNDYL 362
>gi|237709421|ref|ZP_04539902.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|229456477|gb|EEO62198.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
Length = 967
Score = 49.8 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 34/226 (15%), Positives = 71/226 (31%), Gaps = 22/226 (9%)
Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
+ S Y +Y + K++N+ A +F + A ++ +
Sbjct: 460 EFATSKDGQEYGLALYNLGYTYFKQKNYGNAGTWFTRFVDRGSANERAMQADAYNRIGDC 519
Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
+ + + + + DY Y Q ++R+
Sbjct: 520 NFYDRRFEQARQDYARAVEIDPSLGDYSLYQEAFVRGLQRDYNGKVQT--------LNRL 571
Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
+ Y S Y+ A + E GR +++ + AI RF +++ + ++
Sbjct: 572 ISDYPESQYMDDALY--------------EQGRAFVQMEDNANAIARFNILVKKFPESNV 617
Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
A A + Y EA + + YP AR + +K
Sbjct: 618 ARRAANEIGLLYYQDDKYPEAIQAYKQVIASYPGSEEARLAQRDLK 663
Score = 47.5 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 19/233 (8%), Positives = 66/233 (28%), Gaps = 6/233 (2%)
Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKE----QNFSKAYEYFNQCSRDFPFAGVARKSL 97
++ L + + +++A+ F + +++A + R + R
Sbjct: 391 EAKQKILFRLGTQAFANARFQEALEFFNQSLAVGQYNQATKADTYFWRGESNYRLDRFPQ 450
Query: 98 LMSAFVQY-SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
+ + Y + G + R ++
Sbjct: 451 AGNDYRLYLEFATSKDGQEYGLALYNLGYTYFKQKNYGNAGTWFTRFVDRGSANERAMQA 510
Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK-RGEYVAAIPRFQL 215
+ + L + + + +Y +
Sbjct: 511 DAYNRIGDCNFYDRRFEQARQDYARAVEIDPSLGDYSLYQEAFVRGLQRDYNGKVQTLNR 570
Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
++++Y ++++ ++A+ A+V + A +++ +++P+ AR
Sbjct: 571 LISDYPESQYMDDALYEQGRAFVQMEDNANAIARFNILVKKFPESNVARRAAN 623
Score = 39.4 bits (89), Expect = 0.51, Method: Composition-based stats.
Identities = 19/223 (8%), Positives = 59/223 (26%), Gaps = 15/223 (6%)
Query: 61 YEKAVLFLKEQNFSKA---YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
Y ++L + N+ +A + + + + + F
Sbjct: 177 YYIGEIYLVKGNYQQARTVAKAYLEQYPAKKDVPQMERIWGEACFGLNDYQAAIPPLERY 236
Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE---------- 167
E ++ + + + L + +
Sbjct: 237 RESVSHPQRKPLYELGMSYYYTGVYSKAAATLGEMASVHDALSQNAYLHMGLAYLNLKER 296
Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
+ + A F + A + + + ++ F+ L + ++ + E
Sbjct: 297 NRARMAFEQAANFSFDPKVKEQALYNYALCIHETSYSPFAESVTVFERFLNEFPNSPYTE 356
Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
L+E Y+ + A + ++ I+ P + ++
Sbjct: 357 RVNDYLIEVYMNTRSYEAALKSIAKIEH--PGTRIMEAKQKIL 397
Score = 35.9 bits (80), Expect = 6.1, Method: Composition-based stats.
Identities = 32/235 (13%), Positives = 60/235 (25%), Gaps = 10/235 (4%)
Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF-----AGVARKSLLMS 100
L V+ + VY A + E+ + KA + F D + + L+
Sbjct: 128 TLLKEVSPLYQDDAVYNLAYIDYVEKRYDKALKSFQSLQNDAVYAALVPYYIGEIYLVKG 187
Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
+ Q + E + + L A + + +
Sbjct: 188 NYQQARTVAKAYLEQYPAKKDVPQMERIWGEACFGLNDYQAAIPPLERYRESVSHPQRKP 247
Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY---YLKRGEYVAAIPRFQLVL 217
+ Y Y K A + A + YL E A F+
Sbjct: 248 LYELGMSYYYTGVYSKAAATLGEMASVHDALSQNAYLHMGLAYLNLKERNRARMAFEQAA 307
Query: 218 ANYSDAEHAEEAMARLVEAYVALAL--MDEAREVVSLIQERYPQGYWARYVETLV 270
D + E+A+ + E+ V +P + V +
Sbjct: 308 NFSFDPKVKEQALYNYALCIHETSYSPFAESVTVFERFLNEFPNSPYTERVNDYL 362
>gi|261365081|ref|ZP_05977964.1| putative periplasmic protein [Neisseria mucosa ATCC 25996]
gi|288566506|gb|EFC88066.1| putative periplasmic protein [Neisseria mucosa ATCC 25996]
Length = 244
Score = 49.8 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 11/76 (14%), Positives = 24/76 (31%)
Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
+ + + G + I + + A +A+ + + L D AR
Sbjct: 162 RNMYLLLQSQQRMGHCESVIEIGGRYANRFRSSPQAPDALFSIGQCQYQLQQKDIARNTW 221
Query: 251 SLIQERYPQGYWARYV 266
+ + YP A+
Sbjct: 222 RKLIQSYPGSEAAKRA 237
>gi|332141966|ref|YP_004427704.1| ATP-dependent protease La [Alteromonas macleodii str. 'Deep
ecotype']
gi|327551988|gb|AEA98706.1| ATP-dependent protease La [Alteromonas macleodii str. 'Deep
ecotype']
Length = 397
Score = 49.8 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 32/251 (12%), Positives = 76/251 (30%), Gaps = 8/251 (3%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
+ +L + AV + G S D+Y + + + +L+ N+++A +
Sbjct: 5 LRTSLRVSLLSAVIMVTGCVSNSQSDLYGGNFDHEEAAKTRTSLGLTYLQNNNYTQAKKN 64
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
++ F + A+ G ++A + I PE+ ++ Y
Sbjct: 65 LDKAL---AFDPRSADVQFAMAYYYQLVGDNRRAEEFYKSAIDLAPENGDIANSYGAFKC 121
Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV----E 195
+ + Y A L + + +G Q A K +
Sbjct: 122 QNGEYDKAKAYFFDAINNRLYANAAQTYENLALCAQSQGKVDEAIGYLQDALKHQPARGK 181
Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSD-AEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
+ + L+ Y A+ + + E ++ AR+ ++
Sbjct: 182 TLFLLSELYAVSEQWGLAESSLSKYERVAKITPDYLWLAYEVAKGQGDLEAARDYGEMMV 241
Query: 255 ERYPQGYWARY 265
+P+ +
Sbjct: 242 SVFPESELTKR 252
>gi|285019181|ref|YP_003376892.1| hypothetical protein XALc_2421 [Xanthomonas albilineans GPE PC73]
gi|283474399|emb|CBA16900.1| hypothetical protein XALc_2421 [Xanthomonas albilineans]
Length = 256
Score = 49.8 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 2/70 (2%)
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
K G+Y + FQ L Y + +A A+ L E+Y A D A + RYP
Sbjct: 141 KAGKYADSANLFQSFLQKYPNGVYAPNALYWLGESYYATKNFDLAESQFRDLIGRYPTHD 200
Query: 262 WARYVETLVK 271
+ ++K
Sbjct: 201 --KAAGAMLK 208
Score = 45.9 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 15/78 (19%), Positives = 32/78 (41%)
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+G Y + A +F+ ++ Y + A AM +L + + EA + + +
Sbjct: 170 YWLGESYYATKNFDLAESQFRDLIGRYPTHDKAAGAMLKLGLSQYGEGRVQEAEQTLQQV 229
Query: 254 QERYPQGYWARYVETLVK 271
+YP AR + ++
Sbjct: 230 IGKYPGSDAARTAQDRLQ 247
>gi|307153280|ref|YP_003888664.1| tetratricopeptide repeat-containing protein [Cyanothece sp. PCC
7822]
gi|306983508|gb|ADN15389.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7822]
Length = 1048
Score = 49.8 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/237 (11%), Positives = 59/237 (24%), Gaps = 17/237 (7%)
Query: 22 FALTIFFSIAVCFLVGWER-------QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFS 74
F+L + S+ F + S + L +T + + E+ + L+ ++
Sbjct: 6 FSLRVLLSLLTTFNLSCATLISDPQVSLSENGELAQMTQENKAKTLLEQGMQQLEAGDYQ 65
Query: 75 KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
A + F + Q LG+ K +D
Sbjct: 66 AAIQSFQEALILLRQ------QNDRQGEGQALKNLGNAYFWLGDYAKALDYGQKALDIAR 119
Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
+ + + ++ N R +
Sbjct: 120 DIGDQDLEARALLNLGNLANELQEYPKANDYYQQSLNLAIKSKNRELQAKVLGSMGQSNY 179
Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
G Y ++ + + N + A+ RL AY + +A +
Sbjct: 180 SQGHYDEAIKYLQESLKIAENLSDN----KLQVNALIRLGRAYQEKKELTKAIDYYQ 232
>gi|212692725|ref|ZP_03300853.1| hypothetical protein BACDOR_02223 [Bacteroides dorei DSM 17855]
gi|212664661|gb|EEB25233.1| hypothetical protein BACDOR_02223 [Bacteroides dorei DSM 17855]
Length = 967
Score = 49.8 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 34/226 (15%), Positives = 71/226 (31%), Gaps = 22/226 (9%)
Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
+ S Y +Y + K++N+ A +F + A ++ +
Sbjct: 460 EFATSKDGQEYGLALYNLGYTYFKQKNYGNAGTWFTRFVDRGSANERAMQADAYNRIGDC 519
Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
+ + + + + DY Y Q ++R+
Sbjct: 520 NFYDRRFEQARQDYARAVEIDPSLGDYSLYQEAFVRGLQRDYNGKVQT--------LNRL 571
Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
+ Y S Y+ A + E GR +++ + AI RF +++ + ++
Sbjct: 572 ISDYPESQYMDDALY--------------EQGRAFVQMEDNANAIARFNILVKKFPESNV 617
Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
A A + Y EA + + YP AR + +K
Sbjct: 618 ARRAANEIGLLYYQDDKYPEAIQAYKQVIASYPGSEEARLAQRDLK 663
Score = 46.7 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 18/214 (8%), Positives = 61/214 (28%), Gaps = 6/214 (2%)
Query: 61 YEKAVLFLKE----QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY-SAGKYQQAAS 115
+++A+ F + +++A + R + R + + Y +
Sbjct: 410 FQEALEFFNQSLAMGQYNQATKADAYFWRGESNYRLDRFPQAGNDYRLYLEFATSKDGQE 469
Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
G + R ++ +
Sbjct: 470 YGLALYNLGYTYFKQKNYGNAGTWFTRFVDRGSANERAMQADAYNRIGDCNFYDRRFEQA 529
Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLK-RGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234
+ L + + + +Y + ++++Y ++++ ++A+
Sbjct: 530 RQDYARAVEIDPSLGDYSLYQEAFVRGLQRDYNGKVQTLNRLISDYPESQYMDDALYEQG 589
Query: 235 EAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
A+V + A +++ +++P+ AR
Sbjct: 590 RAFVQMEDNANAIARFNILVKKFPESNVARRAAN 623
Score = 39.4 bits (89), Expect = 0.61, Method: Composition-based stats.
Identities = 25/223 (11%), Positives = 63/223 (28%), Gaps = 15/223 (6%)
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
Y ++L + N+ +A +P + + + YQ A E Y
Sbjct: 177 YYIGEIYLVKGNYQQARTVAKAYLEQYPAKKDVPQMERIWGEACFGLNDYQAAIPPLERY 236
Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY------ 174
+ + Y + + +S+ + Y
Sbjct: 237 RESVSHPQRKPLYELGMSYYYTGVYSKAAATLGEMASVHDALSQNAYLHMGLAYLNLKER 296
Query: 175 -------VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
+ A F + A + + + ++ F+ L + ++ + E
Sbjct: 297 NRARMAFEQAANFSFDPKVKEQALYNYALCIHETSYSPFAESVTVFERFLNEFPNSPYTE 356
Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
L+E Y+ + A + ++ I+ P + ++
Sbjct: 357 RVNDYLIEVYMNTRSYEAALKSIAKIEH--PGTRIMEAKQKIL 397
Score = 35.9 bits (80), Expect = 6.8, Method: Composition-based stats.
Identities = 32/235 (13%), Positives = 60/235 (25%), Gaps = 10/235 (4%)
Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF-----AGVARKSLLMS 100
L V+ + VY A + E+ + KA + F D + + L+
Sbjct: 128 TLLKEVSPLYQDDAVYNLAYIDYVEKRYDKALKSFQSLQNDAVYAALVPYYIGEIYLVKG 187
Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
+ Q + E + + L A + + +
Sbjct: 188 NYQQARTVAKAYLEQYPAKKDVPQMERIWGEACFGLNDYQAAIPPLERYRESVSHPQRKP 247
Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY---YLKRGEYVAAIPRFQLVL 217
+ Y Y K A + A + YL E A F+
Sbjct: 248 LYELGMSYYYTGVYSKAAATLGEMASVHDALSQNAYLHMGLAYLNLKERNRARMAFEQAA 307
Query: 218 ANYSDAEHAEEAMARLVEAYVALAL--MDEAREVVSLIQERYPQGYWARYVETLV 270
D + E+A+ + E+ V +P + V +
Sbjct: 308 NFSFDPKVKEQALYNYALCIHETSYSPFAESVTVFERFLNEFPNSPYTERVNDYL 362
>gi|198273957|ref|ZP_03206489.1| hypothetical protein BACPLE_00093 [Bacteroides plebeius DSM 17135]
gi|198273035|gb|EDY97304.1| hypothetical protein BACPLE_00093 [Bacteroides plebeius DSM 17135]
Length = 1005
Score = 49.8 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 28/244 (11%), Positives = 72/244 (29%), Gaps = 18/244 (7%)
Query: 43 SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ-CSRDFPFAGVARKSLLMSA 101
+ + + Q+ ++ + ++ A +YF + +
Sbjct: 418 EKITHPSARILEAKQKLLFRMGTQLFAQADYRNAIDYFTRSLQLGQYNQKTKADAYYWRG 477
Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT------ 155
+Y +Y +AA+ Y+ + + +Y L + Y+ + R
Sbjct: 478 ESKYRLERYPEAANDMRLYLEFASDKNSQEYGLALYCLGYSLFKQKQYNSARDWFVRCVQ 537
Query: 156 ----------KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK-RG 204
+ + V L + +
Sbjct: 538 NGRTQEASVAGDAYNRIGDCYFYERRFEEARQQYAQAVVTSPSLGDYSLFQEGIVKGLQR 597
Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
+Y I ++ +Y + + ++A+ A+V + + A + SL+ +RYP+ +R
Sbjct: 598 DYAGKIQVLNKLITDYPSSAYLDDALYEQGRAFVQMEDSENAIKRYSLLVQRYPESELSR 657
Query: 265 YVET 268
Sbjct: 658 KAAN 661
Score = 45.9 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 32/226 (14%), Positives = 77/226 (34%), Gaps = 22/226 (9%)
Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
+ Y +Y K++ ++ A ++F +C ++ + +
Sbjct: 498 EFASDKNSQEYGLALYCLGYSLFKQKQYNSARDWFVRCVQNGRTQEASVAGDAYNRIGDC 557
Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
+ + + + DY + G+ +Q ++++
Sbjct: 558 YFYERRFEEARQQYAQAVVTSPSLGDYSLFQEGIVKGLQRDYAGK--------IQVLNKL 609
Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
+ Y +S Y+ A + E GR +++ + AI R+ L++ Y ++E
Sbjct: 610 ITDYPSSAYLDDALY--------------EQGRAFVQMEDSENAIKRYSLLVQRYPESEL 655
Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+ +A + Y +EA + +YP AR + +K
Sbjct: 656 SRKAANEIGLLYYQNDRYEEAIAAYKQVITKYPGSAEARLAQRDLK 701
>gi|152969310|ref|YP_001334419.1| tol-pal system protein YbgF [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|238893778|ref|YP_002918512.1| tol-pal system protein YbgF [Klebsiella pneumoniae NTUH-K2044]
gi|262041198|ref|ZP_06014410.1| hypothetical protein HMPREF0484_1426 [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|329998742|ref|ZP_08303196.1| tol-pal system protein YbgF [Klebsiella sp. MS 92-3]
gi|150954159|gb|ABR76189.1| putative periplasmic protein [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|238546094|dbj|BAH62445.1| putative periplasmic protein [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|259041427|gb|EEW42486.1| hypothetical protein HMPREF0484_1426 [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|328538569|gb|EGF64673.1| tol-pal system protein YbgF [Klebsiella sp. MS 92-3]
Length = 264
Score = 49.4 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 18/117 (15%), Positives = 39/117 (33%), Gaps = 14/117 (11%)
Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213
+ V++Y +S Y A +++ K+ A F
Sbjct: 158 RQDDAMVAFQNFVKKYPDSTYQPNANYWLGQLNYNKGRKD--------------DAAFYF 203
Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
V+ NY + A +AM ++ +A+ V + ++P A+ + +
Sbjct: 204 ASVVKNYPKSPKAPDAMFKVGVIMQDKGDTAKAKAVYQQVINKFPGTDGAKQAQKRL 260
Score = 49.0 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 22/74 (29%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
A+ FQ + Y D+ + A L + D+A +
Sbjct: 146 YNAAIALVKDASRQDDAMVAFQNFVKKYPDSTYQPNANYWLGQLNYNKGRKDDAAFYFAS 205
Query: 253 IQERYPQGYWARYV 266
+ + YP+ A
Sbjct: 206 VVKNYPKSPKAPDA 219
>gi|91216378|ref|ZP_01253345.1| putative TPR-repeat protein [Psychroflexus torquis ATCC 700755]
gi|91185516|gb|EAS71892.1| putative TPR-repeat protein [Psychroflexus torquis ATCC 700755]
Length = 1003
Score = 49.4 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 35/206 (16%), Positives = 67/206 (32%), Gaps = 24/206 (11%)
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
Y A + K +N+ +F + + + Q++ G+Y A
Sbjct: 502 YNIAYAYFKIKNYRSTISFFESFIAIERPSQRLHDAYVRLGDAQFALGQYWPAMEAYNSA 561
Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
I + + + + ++ ++ V+ Y S Y A F
Sbjct: 562 IAMKNYNSDYAFFQKAYSYGFVDRNAQK----------IENLNLFVQSYPKSIYKDDALF 611
Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
E+G Y+ E AAI +Q +L NY + + +A+++L Y
Sbjct: 612 --------------ELGNTYVAENEDQAAITTYQNILTNYKQSIYYPKALSKLALIYFNK 657
Query: 241 ALMDEAREVVSLIQERYPQGYWARYV 266
EA + + + YP A
Sbjct: 658 GENQEALMRLKQLIKEYPNSQEALQA 683
Score = 43.6 bits (100), Expect = 0.030, Method: Composition-based stats.
Identities = 32/232 (13%), Positives = 64/232 (27%), Gaps = 22/232 (9%)
Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
+ + + + Y KA + N+ A + + K L
Sbjct: 441 AKDYFNSSLAERLDPEFTAKATYWKAEVDYALGNYDMALIGYKEFK-----GMPMAKQLS 495
Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
Y+ I+ + ++ + +Y ++ + M
Sbjct: 496 EFYSTDYNIAYAYFKIKNYRSTISFFESFIAIERPSQRLHDAYVRLGDAQFALGQYWPAM 555
Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
Y S I + NS Y + Y ++ A K I L +
Sbjct: 556 EAYNSAIAMKNYNSDYAFFQKAYSYGFVDRNAQK-----------------IENLNLFVQ 598
Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
+Y + + ++A+ L YVA A I Y Q + + +
Sbjct: 599 SYPKSIYKDDALFELGNTYVAENEDQAAITTYQNILTNYKQSIYYPKALSKL 650
Score = 36.3 bits (81), Expect = 4.8, Method: Composition-based stats.
Identities = 24/222 (10%), Positives = 56/222 (25%), Gaps = 8/222 (3%)
Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
+ Y + +E + A E F++ + F + K
Sbjct: 171 AQAKYYIGFIAYEENEYESASELFDEARSEGIQGNNISYFQSDMNFKLGNFQKAIDLGME 230
Query: 117 G-------EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
E ++ + + Q +
Sbjct: 231 KLPKSNTRERSQLNKIIGESYFNLKDYTSAIQYLKDYKGDRGKWNNTDYYQLGYAYYQTG 290
Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
+ + + + YLK + + A+ F+ V D + E+A
Sbjct: 291 QYELAIDEFSKILDGQDFVAQNAYYHLAKAYLKTDKKIQALNAFKNVTEMNFDDKLKEDA 350
Query: 230 MARLVEAYVALALMDEAR-EVVSLIQERYPQGYWARYVETLV 270
+ + ++ EV+ E YP + ++ L+
Sbjct: 351 YLNYAKLSYEIGNTYQSVPEVLQAFIENYPTSQESDLIKDLL 392
>gi|189501394|ref|YP_001960864.1| Tetratricopeptide TPR_2 repeat protein [Chlorobium phaeobacteroides
BS1]
gi|189496835|gb|ACE05383.1| Tetratricopeptide TPR_2 repeat protein [Chlorobium phaeobacteroides
BS1]
Length = 299
Score = 49.4 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 26/208 (12%), Positives = 64/208 (30%), Gaps = 2/208 (0%)
Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
++ A + + + A + + + P + A + A
Sbjct: 74 LEDDVLFSLAEAYYNSKQYLLAVDIYKRLLEQTPGSPYAEDAQFKLAQSHKKLSPVSTRD 133
Query: 115 SLGEE--YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
+ S + ++ + ++ +Y
Sbjct: 134 HEHTRKAIREFQLYLELYPVRDPQQLKSDIDLYTELSRLNPENDSYKRSLAAAEAQYARI 193
Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232
V + +T+ R +LA E I +Y K +Y A+ + ++ Y D + E+A
Sbjct: 194 DNVTESISSITLLREKLAEHEFSIAEHYRKLKKYRGALSYYDGIIRFYPDTVYVEKAWYG 253
Query: 233 LVEAYVALALMDEAREVVSLIQERYPQG 260
++ V EA+ + +++P+
Sbjct: 254 KIDVLVKREKWFEAQAAIEAYDQQFPEN 281
>gi|319943000|ref|ZP_08017283.1| hypothetical protein HMPREF0551_0129 [Lautropia mirabilis ATCC
51599]
gi|319743542|gb|EFV95946.1| hypothetical protein HMPREF0551_0129 [Lautropia mirabilis ATCC
51599]
Length = 273
Score = 49.4 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 30/84 (35%), Gaps = 2/84 (2%)
Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
Q E E ++ + AA F Y ++ + A+ A A + A
Sbjct: 150 EQAEKNEFEAALALFRKSNFKAADQAFAKFAKTYPESPYLPTALYWQGGAQYAQGNYNGA 209
Query: 247 REVVSLIQERYPQGYWARYVETLV 270
+ + +R+P AR + L+
Sbjct: 210 VNTLQSLIQRFPDS--ARKADALL 231
Score = 42.1 bits (96), Expect = 0.074, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 42/129 (32%), Gaps = 2/129 (1%)
Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
+ ++ + L + + + + K A+ Y A G
Sbjct: 145 RQFSVEQAEKNEFEAALALFRKSNFKAADQAFAKFAKTYPESPYLPTALY--WQGGAQYA 202
Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
+G Y A+ Q ++ + D+ +A+ + A V AR+ I + +P
Sbjct: 203 QGNYNGAVNTLQSLIQRFPDSARKADALLLIGNAQVDAGNDKAARQTFIRIGKEHPNTPA 262
Query: 263 ARYVETLVK 271
A +K
Sbjct: 263 ANAARERLK 271
>gi|153006245|ref|YP_001380570.1| Tol-Pal system YbgF [Anaeromyxobacter sp. Fw109-5]
gi|152029818|gb|ABS27586.1| Tol-Pal system YbgF [Anaeromyxobacter sp. Fw109-5]
Length = 291
Score = 49.4 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 22/97 (22%), Positives = 39/97 (40%), Gaps = 2/97 (2%)
Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
Y + R + R A + KR A+ + V + + A +AM
Sbjct: 178 YEEYVRRWPADPRASDAGYRAGELLFDQKRFR--EALLAYGKVAEEFPKSARAPDAMLGA 235
Query: 234 VEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
+A V L + EA+ V+ + ERYP+ A+ + +
Sbjct: 236 ADAMVKLEMKTEAKAVLEQLLERYPRSDAAKTAKERL 272
>gi|46580339|ref|YP_011147.1| TPR domain-containing protein [Desulfovibrio vulgaris str.
Hildenborough]
gi|120602284|ref|YP_966684.1| TPR repeat-containing protein [Desulfovibrio vulgaris DP4]
gi|46449756|gb|AAS96406.1| TPR domain protein [Desulfovibrio vulgaris str. Hildenborough]
gi|120562513|gb|ABM28257.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio vulgaris DP4]
gi|311233682|gb|ADP86536.1| tol-pal system protein YbgF [Desulfovibrio vulgaris RCH1]
Length = 312
Score = 49.4 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 11/115 (9%), Positives = 36/115 (31%), Gaps = 5/115 (4%)
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKE-----VEIGRYYLKRGEYVAAIPRFQLV 216
+ + + Y + + K G + + AA ++ V
Sbjct: 195 YDTGISSFNSRNYKDALKSFKDFTDTFPNHKLTSNAWFWQGETNFQMNNFPAAALAYEQV 254
Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
++ + + A+ + + D + + + +++P A+ + +K
Sbjct: 255 ISKFPKSSKLPSALLKQGICFYKTGKKDAGKIRLEELIKKHPDSPEAKRAQQYIK 309
>gi|304395721|ref|ZP_07377604.1| tol-pal system protein YbgF [Pantoea sp. aB]
gi|304357015|gb|EFM21379.1| tol-pal system protein YbgF [Pantoea sp. aB]
Length = 264
Score = 49.4 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 29/70 (41%), Gaps = 2/70 (2%)
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
++ +Y AI Q + Y D+ + A L + D+A + + + YP+
Sbjct: 156 EKKQYDQAISALQAWVKRYPDSTYQPNANYWLGQLNYNKGKKDDAAYYYATVVKNYPKSP 215
Query: 262 WARYVETLVK 271
+ E L+K
Sbjct: 216 --KAAEALLK 223
Score = 45.9 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 19/120 (15%), Positives = 43/120 (35%), Gaps = 14/120 (11%)
Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
+++ + + V+RY +S Y A +++ K+ A
Sbjct: 156 EKKQYDQAISALQAWVKRYPDSTYQPNANYWLGQLNYNKGKKD--------------DAA 201
Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
+ V+ NY + A EA+ ++ +A+ V + + YP A+ + +
Sbjct: 202 YYYATVVKNYPKSPKAAEALLKVGVIMQEKKDTAKAKAVFQQVIKLYPDTESAKQAQKRL 261
>gi|311747248|ref|ZP_07721033.1| putative ATP synthase F1, delta subunit [Algoriphagus sp. PR1]
gi|126578959|gb|EAZ83123.1| putative ATP synthase F1, delta subunit [Algoriphagus sp. PR1]
Length = 995
Score = 49.4 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 32/206 (15%), Positives = 68/206 (33%), Gaps = 22/206 (10%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
+ Y+ +++K + ++E N+S+A F+ P + +L A +S Y
Sbjct: 609 PNSLYYEDALFQKGQINMEETNYSEASRAFSDLITGKPNSPFVPYALESRAVANFSMQNY 668
Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
+Q S + + ++P ++N + LQ + R
Sbjct: 669 EQTISDYKTILDKHPNAQNSETA----------------------LKGLQETLALQGRSG 706
Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
+ + E E + Y A + L NY + +A+
Sbjct: 707 EFSDYLARYKGSNPSSSSVQTLEFESAKSMYFDKNYTQASKALENYLRNYPQSAQRLDAL 766
Query: 231 ARLVEAYVALALMDEAREVVSLIQER 256
L ++Y L +A E +++
Sbjct: 767 YFLGDSYFQLGDKTKALEQFKALEQE 792
Score = 40.9 bits (93), Expect = 0.17, Method: Composition-based stats.
Identities = 23/242 (9%), Positives = 63/242 (26%), Gaps = 18/242 (7%)
Query: 43 SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102
R + YQ+ + +A+++ ++Q + A Y ++ + +S
Sbjct: 413 DRITNKSARIQTAYQKVAFYQAMVYYRDQRYDGAIAYLDKSLAYPIDKTMVLESHFWKGE 472
Query: 103 VQYSAGKYQQAASLGEE-----------------YITQYPESKNVDYVYYLVGMSYAQMI 145
+ G +A ++ Y Y + Y
Sbjct: 473 SYSADGNLPEAIKSYQQAISLGRTTSSAYLTKSLYGLGYSYFNSQQYSRAEEEFKTYTDR 532
Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI-GRYYLKRG 204
++ + + N+ +
Sbjct: 533 LRSRQNKENYDDAMLRLGDCYYVQKRFSEASATFQQAINDGNKGIDYAYYRLAVVQNFQN 592
Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
A+ + +++ Y ++ + E+A+ + + + EA S + P +
Sbjct: 593 NNQQALGQLNTLISRYPNSLYYEDALFQKGQINMEETNYSEASRAFSDLITGKPNSPFVP 652
Query: 265 YV 266
Y
Sbjct: 653 YA 654
Score = 38.2 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 24/214 (11%), Positives = 61/214 (28%), Gaps = 21/214 (9%)
Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
+ +Y + Q +S+A E F + + ++ +
Sbjct: 504 KSLYGLGYSYFNSQQYSRAEEEFKTYTDRLRSRQNKENYDDAMLRLGDCYYVQKRFSEAS 563
Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
+ + + V Q + L ++ ++ RY NS Y +
Sbjct: 564 ATFQQAINDGNKG-------IDYAYYRLAVVQNFQNNNQQALGQLNTLISRYPNSLYYED 616
Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
A F G+ ++ Y A F ++ ++ A+ A
Sbjct: 617 ALFQK--------------GQINMEETNYSEASRAFSDLITGKPNSPFVPYALESRAVAN 662
Query: 238 VALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
++ ++ I +++P + ++
Sbjct: 663 FSMQNYEQTISDYKTILDKHPNAQNSETALKGLQ 696
>gi|83647594|ref|YP_436029.1| hypothetical protein HCH_04913 [Hahella chejuensis KCTC 2396]
gi|83635637|gb|ABC31604.1| uncharacterized protein conserved in bacteria [Hahella chejuensis
KCTC 2396]
Length = 278
Score = 49.4 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 34/90 (37%)
Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
A +G YL + A F +V+ Y + A +AM +L Y L
Sbjct: 186 KHPDSELSANAYYWLGEVYLVIPKLEQARQAFVVVVGKYPEHRKAPDAMYKLGVTYHRLG 245
Query: 242 LMDEAREVVSLIQERYPQGYWARYVETLVK 271
EA++ +S R+P A + ++
Sbjct: 246 DNAEAKKYLSETVSRFPGTSPANLAKDYLR 275
Score = 41.3 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 17/109 (15%), Positives = 45/109 (41%)
Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
+ + ++ + +++ Y++A +K + + KA E + + P + ++
Sbjct: 136 SASSGEETLELTPNKAPPSAAEQQEYDQAFDLIKRREYDKAVEALHAFIKKHPDSELSAN 195
Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
+ V K +QA + +YPE + Y +G++Y ++
Sbjct: 196 AYYWLGEVYLVIPKLEQARQAFVVVVGKYPEHRKAPDAMYKLGVTYHRL 244
>gi|262193342|ref|YP_003264551.1| hypothetical protein Hoch_0016 [Haliangium ochraceum DSM 14365]
gi|262076689|gb|ACY12658.1| conserved hypothetical protein [Haliangium ochraceum DSM 14365]
Length = 293
Score = 49.4 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 22/87 (25%), Positives = 38/87 (43%)
Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
+ + G Y + +Y AAI FQ V Y D+ A++A+ R EA L
Sbjct: 190 QYPSDTRADDAQYYRGEAYYREQDYGAAIREFQKVFDKYEDSSLADDALFRAGEAAQTLR 249
Query: 242 LMDEAREVVSLIQERYPQGYWARYVET 268
EAR +++++YP+ ++
Sbjct: 250 RCSEARAYFGVLRQKYPRSNLVNKSKS 276
Score = 38.2 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 12/83 (14%), Positives = 23/83 (27%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
E+Y + + ++ A Q +P A + Y
Sbjct: 154 QAAKPPSPDELYSQGRAAFERGDYGGAQTLLRQLVTQYPSDTRADDAQYYRGEAYYREQD 213
Query: 110 YQQAASLGEEYITQYPESKNVDY 132
Y A ++ +Y +S D
Sbjct: 214 YGAAIREFQKVFDKYEDSSLADD 236
>gi|237751976|ref|ZP_04582456.1| conserved hypothetical protein [Helicobacter winghamensis ATCC
BAA-430]
gi|229376543|gb|EEO26634.1| conserved hypothetical protein [Helicobacter winghamensis ATCC
BAA-430]
Length = 298
Score = 49.4 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 19/108 (17%), Positives = 37/108 (34%)
Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
+ N G + A +G ++ Y AI ++ Y A
Sbjct: 191 EQFYKDKNYQKADEYLQVAVKGNYKPARGNYLLGEVAFEQKRYEDAIYYYKTSATRYDKA 250
Query: 224 EHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
++ M +++ AL D A+ + + YP A+ + L+K
Sbjct: 251 DYMPRLMLHSAKSFEALKEKDNAKRFLETLIALYPTSSEAKEAKKLIK 298
>gi|39997647|ref|NP_953598.1| putative lipoprotein [Geobacter sulfurreducens PCA]
gi|39984539|gb|AAR35925.1| lipoprotein, putative [Geobacter sulfurreducens PCA]
gi|298506587|gb|ADI85310.1| TPR domain lipoprotein [Geobacter sulfurreducens KN400]
Length = 242
Score = 49.4 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 16/77 (20%), Positives = 32/77 (41%)
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
IG + R + A+ F+LV Y + +A+ + A+ + ARE++ +
Sbjct: 158 YWIGECHYSRSDLPRALDAFRLVAERYPASTKVPDALLKSGYTLYAMKEPERAREILESL 217
Query: 254 QERYPQGYWARYVETLV 270
+YP+ A +
Sbjct: 218 AAKYPRSPAAAKARERL 234
Score = 42.1 bits (96), Expect = 0.076, Method: Composition-based stats.
Identities = 18/71 (25%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
+ A+ FQ LA + D+E+A A+ + E + + + + A + L+ ERYP
Sbjct: 128 YSANNFAGAVEAFQAFLAEHPDSEYAGNALYWIGECHYSRSDLPRALDAFRLVAERYPAS 187
Query: 261 YWARYVETLVK 271
+ + L+K
Sbjct: 188 --TKVPDALLK 196
>gi|254516701|ref|ZP_05128760.1| tetratricopeptide TPR_2 repeat protein [gamma proteobacterium
NOR5-3]
gi|219675124|gb|EED31491.1| tetratricopeptide TPR_2 repeat protein [gamma proteobacterium
NOR5-3]
Length = 304
Score = 49.4 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 18/118 (15%), Positives = 38/118 (32%), Gaps = 12/118 (10%)
Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
+ + + +ER+ Y A +++ + A+
Sbjct: 195 QEFDQAVSAFTAFLERFPAGRYAPNAHYWLGELYL------------VTDPADPEASRQA 242
Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
F L+L Y +A+ +L + D +RE ++ + YP AR +
Sbjct: 243 FMLLLNQYPTNAKIPDALYKLGRVHFMKGNRDRSREFLNRVIREYPDSSAARLAGDFL 300
>gi|110639391|ref|YP_679600.1| TPR repeat-containing protein [Cytophaga hutchinsonii ATCC 33406]
gi|110282072|gb|ABG60258.1| TPR repeat protein [Cytophaga hutchinsonii ATCC 33406]
Length = 265
Score = 49.4 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 46/252 (18%), Positives = 85/252 (33%), Gaps = 18/252 (7%)
Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
++ V V + + + +E A+ + + KA +
Sbjct: 7 ALIVFLQVSCGKF-------NHLQKTGTPQEKLTAAIEYYNNGDNYKAGVLLEDITPILK 59
Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
G A +L A Y +Y +A +++ YP SK V+ Y+ S +
Sbjct: 60 GKGEAETALYYLANNYYKQKQYMMSAYYFKDFYLTYPRSKYVEETMYMNVYSLYLNSPEY 119
Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
DQ +T L+ M+ + RY + Y+ V +L K E Y K G Y +
Sbjct: 120 NLDQTSTYDCLKAMTTFLTRYPKTIYLDQCNAIVDELNAKLMHKAFEHSMMYHKVGNYKS 179
Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD-----------EAREVVSLIQERY 257
A+ + Y ++ + E+A + LA A E + ++Y
Sbjct: 180 AVVAIGNFVNEYPNSIYGEKAYFTRFTSQYHLAKNSVEGKIQEERYILAIEFYQIFMDKY 239
Query: 258 PQGYWARYVETL 269
P + +
Sbjct: 240 PTTIHKKAASEM 251
>gi|149927734|ref|ZP_01915986.1| hypothetical protein LMED105_16053 [Limnobacter sp. MED105]
gi|149823560|gb|EDM82790.1| hypothetical protein LMED105_16053 [Limnobacter sp. MED105]
Length = 248
Score = 49.4 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 19/259 (7%), Positives = 68/259 (26%), Gaps = 16/259 (6%)
Query: 15 WAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKA--VLFLKEQN 72
+ + + A I A + + + + + + ++ + +
Sbjct: 1 MTFNIKQKAWAIALFCAFASNSAFAIFDDTEARKAILDLRQQVKVLEDRVARMESANQGQ 60
Query: 73 FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132
S A + G + +Q + + + +
Sbjct: 61 LSLAQSLSEKDREIARLRGDLEVANNNIRKLQEDNRLLYTNLDDRLKKLEPKAVQLDGEE 120
Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
+ + K + +Y S R+++ +
Sbjct: 121 LTVPPEQFNDYQAGLDHFKAGNYKDAALQFQDFLNKYKQSKLEPQVRYFLGSTQFAQGEY 180
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ + + + ++ D+ A +A+ + + + L + A++ +
Sbjct: 181 KTALVTQ--------------RDLAKDFPDSPRAPDALLSMASSQLELKSIPGAKKTLGE 226
Query: 253 IQERYPQGYWARYVETLVK 271
+ +YP A + ++
Sbjct: 227 LIAKYPNSPAAASAKARLE 245
>gi|82523862|emb|CAI78810.1| hypothetical protein [uncultured candidate division WS3 bacterium]
Length = 310
Score = 49.4 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 40/258 (15%), Positives = 77/258 (29%), Gaps = 13/258 (5%)
Query: 19 LYKFALTIFFSIAVCFLV-GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLK-----EQN 72
+ + + L G Q ++ + LD R VY + + ++
Sbjct: 55 MRRNMCRCAVVVFAALLAPGCITQQAQQINLDIAALQDSLRIVYARQDALYEHIVQMDER 114
Query: 73 FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132
F++ A + + + + Q +
Sbjct: 115 LDAQDTRFDEIHA-----EHAADVADLESRIVSTQTNVDQTQDRMVSLSQRMDSLDRRVS 169
Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
+ + + + A S+ + + + Y R A
Sbjct: 170 GARAPARADSAGLVALEDMGAAYDRAYLDFSKGKYQLAIQGFTDYLKNYPGTERADNAQY 229
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
IG Y + ++ +AI FQ VL Y D A AM ++ A ++L EA +
Sbjct: 230 --WIGECYYVQRDHDSAIEAFQRVLDQYPDGNKAPGAMLKIGYALLSLDREREAIRQLKT 287
Query: 253 IQERYPQGYWARYVETLV 270
+ ERYPQ A + +
Sbjct: 288 VMERYPQTSEAEHARAKL 305
>gi|288940692|ref|YP_003442932.1| tol-pal system protein YbgF [Allochromatium vinosum DSM 180]
gi|288896064|gb|ADC61900.1| tol-pal system protein YbgF [Allochromatium vinosum DSM 180]
Length = 289
Score = 49.4 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 19/129 (14%), Positives = 42/129 (32%), Gaps = 14/129 (10%)
Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
+R + + ++ RY Y AR+++ G Y
Sbjct: 167 YSQGFEHLKERQYQEAKTAFNDLLRRYPQGEYADNARYWL--------------GETYYV 212
Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
EY AA+ + ++ + A+ ++ +++AR + + YP
Sbjct: 213 LREYPAALAEYDRLVELNPASAKVPGALLKIGFIQYEQNAIEQARATLERVIREYPNSTE 272
Query: 263 ARYVETLVK 271
AR ++
Sbjct: 273 ARLARDRLE 281
Score = 39.4 bits (89), Expect = 0.56, Method: Composition-based stats.
Identities = 23/122 (18%), Positives = 42/122 (34%), Gaps = 8/122 (6%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
T +R++Y + LKE+ + +A FN R +P A + Y +
Sbjct: 156 PETHGASERDLYSQGFEHLKERQYQEAKTAFNDLLRRYPQGEYADNARYWLGETYYVLRE 215
Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
Y A + + + P S V +G + A + + R++ Y
Sbjct: 216 YPAALAEYDRLVELNPASAKVPGALLKIGFIQYEQ--------NAIEQARATLERVIREY 267
Query: 170 TN 171
N
Sbjct: 268 PN 269
>gi|260597141|ref|YP_003209712.1| hypothetical protein CTU_13490 [Cronobacter turicensis z3032]
gi|260216318|emb|CBA29306.1| Uncharacterized protein ybgF [Cronobacter turicensis z3032]
Length = 236
Score = 49.0 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 20/121 (16%), Positives = 42/121 (34%), Gaps = 14/121 (11%)
Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
D+ + S +++Y +S Y A +++ K+ A
Sbjct: 127 QDKSRQDEAITAFSNFIKQYPDSTYQPNAHYWLGQLNYNKGKKD--------------DA 172
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
F V+ NY + A +AM ++ +A+ V + +YP A+ +
Sbjct: 173 AYYFASVVKNYPKSPKAADAMYKVGVIMQDKGDTAKAKAVYQQVISKYPGTEGAKQAQKR 232
Query: 270 V 270
+
Sbjct: 233 L 233
Score = 47.5 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 22/74 (29%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ AI F + Y D+ + A L + D+A +
Sbjct: 119 YNAAIALVQDKSRQDEAITAFSNFIKQYPDSTYQPNAHYWLGQLNYNKGKKDDAAYYFAS 178
Query: 253 IQERYPQGYWARYV 266
+ + YP+ A
Sbjct: 179 VVKNYPKSPKAADA 192
>gi|313205262|ref|YP_004043919.1| hypothetical protein [Paludibacter propionicigenes WB4]
gi|312444578|gb|ADQ80934.1| Tetratricopeptide TPR_1 repeat-containing protein [Paludibacter
propionicigenes WB4]
Length = 1010
Score = 49.0 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 33/240 (13%), Positives = 69/240 (28%), Gaps = 17/240 (7%)
Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
+ +S Q +Y+ + + KA EYF+ R + + L A
Sbjct: 417 KIKTPNSKLLETKQYLLYQLGTEAFTQNSLGKAIEYFSLSLRSSTTGKYSAECLYWRAES 476
Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT-------- 155
Y K A + + + + V ++YA + +
Sbjct: 477 YYRTDKPDLAIRDLKAFFNNSNSKSSANRVAANYLLAYAYFAQKNYPEALNWFLKYTEAE 536
Query: 156 --------KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK-RGEY 206
L + N + A + Y + Y
Sbjct: 537 TNSGAVTLSDALNRIGDCYFYARNLSKAQLFYSKAVAASPNTADYAMFQSAYVAGLQKNY 596
Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
+ I + + ++ Y +E+ ++AM + AY+ + ++A + P AR
Sbjct: 597 SSKITKLESLITQYPKSEYTDDAMYEMGRAYLMMDNNEKAIATYQRLLAAQPTSEMARKA 656
Score = 38.2 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 32/211 (15%), Positives = 62/211 (29%), Gaps = 22/211 (10%)
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
Y A + ++N+ +A +F + + +G S ++ + +
Sbjct: 510 YLLAYAYFAQKNYPEALNWFLKYTEAETNSGAVTLSDALNRIGDCYFYARNLSKAQLFYS 569
Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
DY + + + ++ +Y S Y A +
Sbjct: 570 KAVAASPNTADYAMFQSAYVAGLQKNYSSK--------ITKLESLITQYPKSEYTDDAMY 621
Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
E+GR YL AI +Q +LA +E A +A + Y
Sbjct: 622 --------------EMGRAYLMMDNNEKAIATYQRLLAAQPTSEMARKAALEIGMVYYNE 667
Query: 241 ALMDEAREVVSLIQERYPQGYWARYVETLVK 271
D A + +YP A ++
Sbjct: 668 KQNDRAIPAYKNVIAKYPGTDEANTALESLQ 698
Score = 37.5 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 28/222 (12%), Positives = 70/222 (31%), Gaps = 14/222 (6%)
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
Y ++ ++++ + + + RD P + ++ + Y Y +A + Y
Sbjct: 214 YYIVQIYYAQKDYDQLNDRAERILRDNPDNKNNAEIYRIAGEIAYRKRDYVKAIEHLKNY 273
Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
+P+ D + + + M+ + + Y+K +
Sbjct: 274 EKLFPQVLRNDMYLLGMSYFQTKDYTNAVRYLSKVTTDKDEMTENAYLHLGNSYIKLKDY 333
Query: 181 YVTVGRNQLA------------AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
+ A A Y + +I F+ L + ++++ +E
Sbjct: 334 TNARLAYEAALRTSFNKTVREEAMFNYALTSYESTSAFGESISAFEQFLTEFPNSKYTDE 393
Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
A L Y+ D A S+++ + P + L+
Sbjct: 394 AYDYLSSVYMTTKNYDAA--YQSILKIKTPNSKLLETKQYLL 433
>gi|307545158|ref|YP_003897637.1| hypothetical protein HELO_2568 [Halomonas elongata DSM 2581]
gi|307217182|emb|CBV42452.1| hypothetical protein HELO_2568 [Halomonas elongata DSM 2581]
Length = 268
Score = 49.0 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 17/83 (20%), Positives = 33/83 (39%)
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
A +G + E AA F V+ +Y D+ +A+ +L + +RE
Sbjct: 182 TANAYYWLGELHSAESELDAAADAFNRVIESYPDSNKVPDALYKLGLLKARQGDPEASRE 241
Query: 249 VVSLIQERYPQGYWARYVETLVK 271
++ +Q YP A + ++
Sbjct: 242 LLERVQNDYPDSSAANLADDFLR 264
>gi|145220537|ref|YP_001131246.1| putative lipoprotein [Prosthecochloris vibrioformis DSM 265]
gi|145206701|gb|ABP37744.1| putative lipoprotein [Chlorobium phaeovibrioides DSM 265]
Length = 298
Score = 49.0 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 46/275 (16%), Positives = 90/275 (32%), Gaps = 45/275 (16%)
Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
+ A L G Q V +E Y +A F +++ + KA
Sbjct: 12 LVVIVFASMALWGCSSQK------PVVKAETQVKEGYSRASEFYQKEEYEKAAAELEPLL 65
Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
+ L + A + + +Y ++ + + + Q P S + +++ SY ++
Sbjct: 66 FSSRATALEDDVLFLLADSYFQSEQYLLSSDMYDRLLQQVPRSPFREQAGFMLAQSYEKL 125
Query: 145 IRDVPYDQRATKLMLQYMSRIVERY-----------------------TNSPYVKGARFY 181
DQ T+ ++ S + Y N+ Y + +
Sbjct: 126 SPVYELDQEYTRKAIESYSLWLGEYGTRDSAAVSRDLDTYRELLKINPDNASYRERFEGF 185
Query: 182 VTVGRN----------------QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
+ +LAA + R Y+ +Y AA F V++ YS
Sbjct: 186 SREMKRQGSITHATKAIPVLYDKLAASAYSVARQYVVLKKYKAAGISFDEVVSRYSQTPW 245
Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
+A+ +E V EAR + ++YP+
Sbjct: 246 YRKALVGRIEVLVKRGKWFEARTAMDQFLQKYPES 280
>gi|322421139|ref|YP_004200362.1| hypothetical protein GM18_3658 [Geobacter sp. M18]
gi|320127526|gb|ADW15086.1| conserved repeat domain protein [Geobacter sp. M18]
Length = 811
Score = 49.0 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 17/76 (22%), Positives = 31/76 (40%), Gaps = 1/76 (1%)
Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
G ++ +Y +AI +L Y D + A+ L A + EA + ++
Sbjct: 43 GFNAYQKKDYKSAIESMSGLLKKYPDTPLKDMAIFWLARANYKVGNNQEAGKYMAQFLRD 102
Query: 257 YPQGYWARYVET-LVK 271
YP+ VE L++
Sbjct: 103 YPESPLRATVEDGLLQ 118
>gi|222054405|ref|YP_002536767.1| chromosome segregation ATPase-like protein [Geobacter sp. FRC-32]
gi|221563694|gb|ACM19666.1| chromosome segregation ATPase-like protein [Geobacter sp. FRC-32]
Length = 1013
Score = 49.0 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 12/65 (18%), Positives = 24/65 (36%)
Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
G ++ +Y + + +L +Y D + A+ L A EA ++ +
Sbjct: 43 GFNAYQKKDYQTTVDKMGTLLKSYPDTPLRDMAIFWLARANYKAGHKQEAARYMAQFFKE 102
Query: 257 YPQGY 261
YP
Sbjct: 103 YPDSP 107
>gi|251770989|gb|EES51573.1| protein of unknown function [Leptospirillum ferrodiazotrophum]
Length = 261
Score = 49.0 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 28/80 (35%), Gaps = 1/80 (1%)
Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
+G + +Y AI FQ V + A+ A+ + + Y L A
Sbjct: 163 FYYESMGLTMMSAHQYDQAIAMFQKVTE-FPGKILADAALYNIGKTYEILNQTALAIINY 221
Query: 251 SLIQERYPQGYWARYVETLV 270
+ + +P WA E +
Sbjct: 222 KKLVKEFPSSPWAAESEPFL 241
>gi|218782963|ref|YP_002434281.1| hypothetical protein Dalk_5143 [Desulfatibacillum alkenivorans
AK-01]
gi|218764347|gb|ACL06813.1| conserved hypothetical protein [Desulfatibacillum alkenivorans
AK-01]
Length = 317
Score = 49.0 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 17/82 (20%), Positives = 37/82 (45%)
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
A ++ +GEY A+ ++ L + + + A +A R+ ++Y +EA++
Sbjct: 39 DADSQLAFAESNFSQGEYYRAVSEYRRFLYFFPNDDRAPQAALRIGQSYYLGQDYEEAQK 98
Query: 249 VVSLIQERYPQGYWARYVETLV 270
+ + +YPQ A L+
Sbjct: 99 ALKSMAAQYPQSPLAAEASLLI 120
>gi|206576794|ref|YP_002239636.1| tol-pal system protein YbgF [Klebsiella pneumoniae 342]
gi|288936477|ref|YP_003440536.1| tol-pal system protein YbgF [Klebsiella variicola At-22]
gi|290510466|ref|ZP_06549836.1| hypothetical protein HMPREF0485_02236 [Klebsiella sp. 1_1_55]
gi|206565852|gb|ACI07628.1| tol-pal system protein YbgF [Klebsiella pneumoniae 342]
gi|288891186|gb|ADC59504.1| tol-pal system protein YbgF [Klebsiella variicola At-22]
gi|289777182|gb|EFD85180.1| hypothetical protein HMPREF0485_02236 [Klebsiella sp. 1_1_55]
Length = 266
Score = 49.0 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 18/117 (15%), Positives = 39/117 (33%), Gaps = 14/117 (11%)
Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213
+ V++Y +S Y A +++ K+ A F
Sbjct: 160 RQDDAMVAFQNFVKKYPDSTYQPNANYWLGQLNYNKGKKD--------------DAAFYF 205
Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
V+ NY + A +AM ++ +A+ V + ++P A+ + +
Sbjct: 206 ASVVKNYPKSPKAPDAMFKVGVIMQDKGDTAKAKAVYQQVISKFPGTDGAKQAQKRL 262
Score = 48.6 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 22/74 (29%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
A+ FQ + Y D+ + A L + D+A +
Sbjct: 148 YNAAIALVKDASRQDDAMVAFQNFVKKYPDSTYQPNANYWLGQLNYNKGKKDDAAFYFAS 207
Query: 253 IQERYPQGYWARYV 266
+ + YP+ A
Sbjct: 208 VVKNYPKSPKAPDA 221
>gi|317476438|ref|ZP_07935687.1| tetratricopeptide [Bacteroides eggerthii 1_2_48FAA]
gi|316907464|gb|EFV29169.1| tetratricopeptide [Bacteroides eggerthii 1_2_48FAA]
Length = 1010
Score = 49.0 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 31/222 (13%), Positives = 63/222 (28%), Gaps = 22/222 (9%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
Y Y A + +++++ A + F + + + +
Sbjct: 510 QKNTEMYALAYYNLAYIAFHKKDYATAQDRFQKFIQLQKSGDATVLADAYNRIGDCHMQA 569
Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
+ + + + DY YY + + +L +Y +
Sbjct: 570 RRFDEAKQYYTRAENLGTPAGDYSYYQLALVAGLQKNYDGKVALLNQLANKYPN------ 623
Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
E GR Y++ AI F+ +L Y ++ + +A
Sbjct: 624 ----------------SPYAINALYEKGRSYVQSRNNSQAIATFRELLNKYPESPVSRKA 667
Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
A + Y D A E + +YP AR +K
Sbjct: 668 AAEIGLLYYQNDDYDRAIEAYKHVITKYPGSEEARLAMRDLK 709
Score = 44.4 bits (102), Expect = 0.018, Method: Composition-based stats.
Identities = 25/210 (11%), Positives = 51/210 (24%), Gaps = 20/210 (9%)
Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
+Y + + + +A FN +L + K A +
Sbjct: 478 ANALYWRGESYYRLNRMQEAARNFNDYLSLTTQKNTEMYALAYYNLAYIAFHKKDYATAQ 537
Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
+ V I D R QY +R
Sbjct: 538 DRFQKFIQLQKSGDATV----LADAYNRIGDCHMQARRFDEAKQYYTR------------ 581
Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
+G ++ + Y + + Y ++ +A A+ +
Sbjct: 582 ----AENLGTPAGDYSYYQLALVAGLQKNYDGKVALLNQLANKYPNSPYAINALYEKGRS 637
Query: 237 YVALALMDEAREVVSLIQERYPQGYWARYV 266
YV +A + +YP+ +R
Sbjct: 638 YVQSRNNSQAIATFRELLNKYPESPVSRKA 667
Score = 37.5 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 33/228 (14%), Positives = 69/228 (30%), Gaps = 15/228 (6%)
Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
+ +YEK +++ +N S+A F + +P + V+RK+ +
Sbjct: 615 NQLANKYPNSPYAINALYEKGRSYVQSRNNSQAIATFRELLNKYPESPVSRKAAAEIGLL 674
Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY---------------AQMIRDV 148
Y Y +A + IT+YP S+ + Y
Sbjct: 675 YYQNDDYDRAIEAYKHVITKYPGSEEARLAMRDLKSIYVEANRVDEFAALAAQMPGAIRF 734
Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
++ + + ++ R+ + + K +
Sbjct: 735 EPSEQDSLTYIAAEKVYMKGELTPAKASFTRYLQSYPNGAFSLNAHYYLSIIGKEQKDEV 794
Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
A+ L Y D+ ++EEA+ E ++A +Q R
Sbjct: 795 AVLEHAGKLLEYPDSPYSEEALLMRGEILFNHKEYEQAMADYKQLQAR 842
>gi|239906856|ref|YP_002953597.1| hypothetical protein DMR_22200 [Desulfovibrio magneticus RS-1]
gi|239796722|dbj|BAH75711.1| hypothetical protein [Desulfovibrio magneticus RS-1]
Length = 312
Score = 49.0 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 35/82 (42%)
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
+A G Y + G++ A +Q V+ Y + +A+ + A+ L A+
Sbjct: 229 MANAMFWTGECYFQLGDFANAALSYQEVIEKYPKSAKHADALFKRGVAFSKLGNAGAAKL 288
Query: 249 VVSLIQERYPQGYWARYVETLV 270
+ ++YP +A +T++
Sbjct: 289 SFKEVIDKYPDSAFAARAKTMM 310
Score = 44.8 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 19/83 (22%), Positives = 29/83 (34%), Gaps = 2/83 (2%)
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
A G +Y A+ FQ N+ + AM E Y L A
Sbjct: 192 PADAVYAKGLTSFNSRQYQQALGIFQEFARNFKSSPLMANAMFWTGECYFQLGDFANAAL 251
Query: 249 VVSLIQERYPQGYWARYVETLVK 271
+ E+YP+ A++ + L K
Sbjct: 252 SYQEVIEKYPKS--AKHADALFK 272
>gi|126661330|ref|ZP_01732397.1| TPR repeat [Cyanothece sp. CCY0110]
gi|126617383|gb|EAZ88185.1| TPR repeat [Cyanothece sp. CCY0110]
Length = 306
Score = 49.0 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 36/244 (14%), Positives = 73/244 (29%), Gaps = 16/244 (6%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
F +AV F +G+ +S + + + + V +L +QN+ +A
Sbjct: 6 KNFFNFFVLIVAVLFCLGFSSPNSENESISPN---------FSQGVYYLTQQNYQEAILK 56
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGK--YQQAASLGEEYITQYPESKNVDYVYYLV 137
F Q + + S A++Q + + + E N Y +
Sbjct: 57 FTQVINNKNQKIASAYSNRCLAYLQINNNQAAKRDCEQALEMNSNNIEAYLNKGLADYQL 116
Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
+ +R Y ++ + + Y + Y +
Sbjct: 117 ENYTQSLAAYQEVIKRHKNDYRAYYNQGLVYFKLENYQQALENYQQALETNQDHSLKDKT 176
Query: 198 RYYLKRGEYVAAIPRFQLVLANYSD----AEHAEEAMARLVEAYVALALMDEA-REVVSL 252
Y R + F +AN++ + E+A R AY L A ++ +
Sbjct: 177 FIYYDRALAYLKLENFTQAIANFTHVLILNPNNEQAYYRRGYAYQKLGNYQAAFKDFTEV 236
Query: 253 IQER 256
I
Sbjct: 237 IALN 240
>gi|332704255|ref|ZP_08424343.1| tol-pal system protein YbgF [Desulfovibrio africanus str. Walvis
Bay]
gi|332554404|gb|EGJ51448.1| tol-pal system protein YbgF [Desulfovibrio africanus str. Walvis
Bay]
Length = 242
Score = 49.0 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 31/78 (39%)
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+G Y + Y AI F+ V+ + A +A ++ +Y L AR V +
Sbjct: 161 YWLGETYYSQKRYSLAILTFKDVMRRFPVHSKASDAALKIGYSYEQLGDTQNARLVFKNL 220
Query: 254 QERYPQGYWARYVETLVK 271
+ YP A T +K
Sbjct: 221 LKTYPDSNSAELARTKLK 238
>gi|188534418|ref|YP_001908215.1| tol-pal system protein YbgF [Erwinia tasmaniensis Et1/99]
gi|188029460|emb|CAO97337.1| Conserved hypothetical protein [Erwinia tasmaniensis Et1/99]
Length = 270
Score = 49.0 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 29/70 (41%), Gaps = 2/70 (2%)
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
++ +Y +AI FQ + Y D+ A L + D+A + + + YP+
Sbjct: 162 EKKQYDSAISAFQAFVKKYPDSTFQPNANYWLGQLNYNKGKKDDAAYYFATVVKNYPKSP 221
Query: 262 WARYVETLVK 271
+ + L K
Sbjct: 222 --KSADALFK 229
Score = 48.6 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 17/119 (14%), Positives = 41/119 (34%), Gaps = 14/119 (11%)
Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
+++ + V++Y +S + A +++ K+ A
Sbjct: 162 EKKQYDSAISAFQAFVKKYPDSTFQPNANYWLGQLNYNKGKKD--------------DAA 207
Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
F V+ NY + + +A+ ++ +A+ V + + YP A+ E
Sbjct: 208 YYFATVVKNYPKSPKSADALFKVGVIMQEKGDKAKAKAVYQQVIKLYPNSEAAKLSEKR 266
>gi|283780565|ref|YP_003371320.1| hypothetical protein Psta_2794 [Pirellula staleyi DSM 6068]
gi|283439018|gb|ADB17460.1| Tetratricopeptide domain protein [Pirellula staleyi DSM 6068]
Length = 789
Score = 49.0 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 27/204 (13%), Positives = 68/204 (33%), Gaps = 15/204 (7%)
Query: 67 FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126
+ A + +FP +G +LL A V + G+ Q+A + ++
Sbjct: 591 YFAMDKLDLAAAMCQRLQTEFPESGFVDDALLQLAEVARTQGELQRAIGIFSRLVSMQTS 650
Query: 127 SKNVDYVYYLV-GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
+ + + + + + Q ++ + + +
Sbjct: 651 TLRGEAQFGVALCYDDMSAKAEPAAAAQLQDRAFQEYKKVYDEFPD-------------- 696
Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
++ ++ YY + +Y A+ F+ VLA+ DA+ + + + E
Sbjct: 697 SGRVGEAVAKMANYYYIQKDYARAVDTFETVLASQPDAKFLDVILFNYGRCLYRMERKAE 756
Query: 246 AREVVSLIQERYPQGYWARYVETL 269
AR+ + +P+ A + +
Sbjct: 757 ARQRFDQLISEFPESPLAADAKKI 780
Score = 42.1 bits (96), Expect = 0.088, Method: Composition-based stats.
Identities = 14/134 (10%), Positives = 33/134 (24%), Gaps = 5/134 (3%)
Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN-----SPYVKGARF 180
+D + + + + + + PY +
Sbjct: 64 GDARLDAEETDKAVEIWKSVIERYPRSKHRFEASLRLGNFYLDRERAYDRARPYFESVAA 123
Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
Q A +++G Y Y + V+ +Y + EA + + L
Sbjct: 124 EENRDEAQRAEATLKLGICYYHARNYGKCFQIMRDVIEDYPVSPQVNEAYYYIGLGHFQL 183
Query: 241 ALMDEAREVVSLIQ 254
A + +
Sbjct: 184 GHYSRAISALEKVG 197
>gi|294775054|ref|ZP_06740583.1| putative tol-pal system protein YbgF [Bacteroides vulgatus PC510]
gi|294451098|gb|EFG19569.1| putative tol-pal system protein YbgF [Bacteroides vulgatus PC510]
Length = 960
Score = 49.0 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 31/213 (14%), Positives = 67/213 (31%), Gaps = 22/213 (10%)
Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
+Y + K++N+ A +F + ++ + + + + +
Sbjct: 466 ALYNLGYTYFKQKNYGNAGTWFTRFVDRGSINERTMQADAYNRIGDCNFYDRRFEQARQD 525
Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
+ DY Y Q ++R++ Y S Y+ A
Sbjct: 526 YARAVEIDPSLGDYSLYQEAFVRGLQRDYNGKVQT--------LNRLISDYPESQYMDDA 577
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
+ E GR +++ + AI RF +++ + ++ A A + Y
Sbjct: 578 LY--------------EQGRAFVQMEDNANAIARFNILVKKFPESNVARRAANEIGLLYY 623
Query: 239 ALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
EA + + YP AR + +K
Sbjct: 624 QDDKYPEAIQAYKQVIAGYPGSEEARLAQRDLK 656
Score = 47.5 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 19/233 (8%), Positives = 66/233 (28%), Gaps = 6/233 (2%)
Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKE----QNFSKAYEYFNQCSRDFPFAGVARKSL 97
++ L + + +++A+ F + +++A + R + R
Sbjct: 384 EAKQKILFRLGTQAFANARFQEALEFFNQSLAVGQYNQATKADAYFWRGESNYRLDRFPQ 443
Query: 98 LMSAFVQY-SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
+ + Y + G + R ++
Sbjct: 444 AGNDYRLYLEFATSKNGQEYGLALYNLGYTYFKQKNYGNAGTWFTRFVDRGSINERTMQA 503
Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK-RGEYVAAIPRFQL 215
+ + L + + + +Y +
Sbjct: 504 DAYNRIGDCNFYDRRFEQARQDYARAVEIDPSLGDYSLYQEAFVRGLQRDYNGKVQTLNR 563
Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
++++Y ++++ ++A+ A+V + A +++ +++P+ AR
Sbjct: 564 LISDYPESQYMDDALYEQGRAFVQMEDNANAIARFNILVKKFPESNVARRAAN 616
Score = 39.8 bits (90), Expect = 0.47, Method: Composition-based stats.
Identities = 19/223 (8%), Positives = 59/223 (26%), Gaps = 15/223 (6%)
Query: 61 YEKAVLFLKEQNFSKA---YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
Y ++L + N+ +A + + + + + F
Sbjct: 170 YYIGEIYLVKGNYQQARTVAKAYLEQYPAKKDVPQMERIWGEACFGLNDYQAAIPPLERY 229
Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE---------- 167
E ++ + + + L + +
Sbjct: 230 RESVSHPQRKPLYELGMSYYYTGVYSKAAATLGEMASVHDALSQNAYLHMGLAYLNLKER 289
Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
+ + A F + A + + + ++ F+ L + ++ + E
Sbjct: 290 NRARMAFEQAANFSFDPKVKEQALYNYALCIHETSYSPFAESVTVFERFLNEFPNSPYTE 349
Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
L+E Y+ + A + ++ I+ P + ++
Sbjct: 350 RVNDYLIEVYMNTRSYEAALKSIAKIEH--PGTRIMEAKQKIL 390
Score = 35.9 bits (80), Expect = 5.7, Method: Composition-based stats.
Identities = 32/235 (13%), Positives = 60/235 (25%), Gaps = 10/235 (4%)
Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF-----AGVARKSLLMS 100
L V+ + VY A + E+ + KA + F D + + L+
Sbjct: 121 TLLKEVSPLYQDDAVYNLAYIDYVEKRYDKALKSFQSLQNDAVYAALVPYYIGEIYLVKG 180
Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
+ Q + E + + L A + + +
Sbjct: 181 NYQQARTVAKAYLEQYPAKKDVPQMERIWGEACFGLNDYQAAIPPLERYRESVSHPQRKP 240
Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY---YLKRGEYVAAIPRFQLVL 217
+ Y Y K A + A + YL E A F+
Sbjct: 241 LYELGMSYYYTGVYSKAAATLGEMASVHDALSQNAYLHMGLAYLNLKERNRARMAFEQAA 300
Query: 218 ANYSDAEHAEEAMARLVEAYVALAL--MDEAREVVSLIQERYPQGYWARYVETLV 270
D + E+A+ + E+ V +P + V +
Sbjct: 301 NFSFDPKVKEQALYNYALCIHETSYSPFAESVTVFERFLNEFPNSPYTERVNDYL 355
>gi|254880860|ref|ZP_05253570.1| TPR domain-containing protein [Bacteroides sp. 4_3_47FAA]
gi|254833653|gb|EET13962.1| TPR domain-containing protein [Bacteroides sp. 4_3_47FAA]
Length = 967
Score = 49.0 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 31/213 (14%), Positives = 67/213 (31%), Gaps = 22/213 (10%)
Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
+Y + K++N+ A +F + ++ + + + + +
Sbjct: 473 ALYNLGYTYFKQKNYGNAGTWFTRFVDRGSINERTMQADAYNRIGDCNFYDRRFEQARQD 532
Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
+ DY Y Q ++R++ Y S Y+ A
Sbjct: 533 YARAVEIDPSLGDYSLYQEAFVRGLQRDYNGKVQT--------LNRLISDYPESQYMDDA 584
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
+ E GR +++ + AI RF +++ + ++ A A + Y
Sbjct: 585 LY--------------EQGRAFVQMEDNANAIARFNILVKKFPESNVARRAANEIGLLYY 630
Query: 239 ALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
EA + + YP AR + +K
Sbjct: 631 QDDKYPEAIQAYKQVIAGYPGSEEARLAQRDLK 663
Score = 47.5 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 18/233 (7%), Positives = 65/233 (27%), Gaps = 6/233 (2%)
Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKE----QNFSKAYEYFNQCSRDFPFAGVARKSL 97
++ L + + +++A+ + +++A + R + R
Sbjct: 391 EAKQKILFRLGTQAFANARFQEALELFNQSLAVGQYNQATKADAYFWRGESNYRLDRFPQ 450
Query: 98 LMSAFVQY-SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
+ + Y + G + R ++
Sbjct: 451 AGNDYRLYLEFATSKNGQEYGLALYNLGYTYFKQKNYGNAGTWFTRFVDRGSINERTMQA 510
Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK-RGEYVAAIPRFQL 215
+ + L + + + +Y +
Sbjct: 511 DAYNRIGDCNFYDRRFEQARQDYARAVEIDPSLGDYSLYQEAFVRGLQRDYNGKVQTLNR 570
Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
++++Y ++++ ++A+ A+V + A +++ +++P+ AR
Sbjct: 571 LISDYPESQYMDDALYEQGRAFVQMEDNANAIARFNILVKKFPESNVARRAAN 623
Score = 39.8 bits (90), Expect = 0.47, Method: Composition-based stats.
Identities = 19/223 (8%), Positives = 59/223 (26%), Gaps = 15/223 (6%)
Query: 61 YEKAVLFLKEQNFSKA---YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
Y ++L + N+ +A + + + + + F
Sbjct: 177 YYIGEIYLVKGNYQQARTVAKAYLEQYPAKKDVPQMERIWGEACFGLNDYQAAIPPLERY 236
Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE---------- 167
E ++ + + + L + +
Sbjct: 237 RESVSHPQRKPLYELGMSYYYTGVYSKAAATLGEMASVHDALSQNAYLHMGLAYLNLKER 296
Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
+ + A F + A + + + ++ F+ L + ++ + E
Sbjct: 297 NRARMAFEQAANFSFDPKVKEQALYNYALCIHETSYSPFAESVTVFERFLNEFPNSPYTE 356
Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
L+E Y+ + A + ++ I+ P + ++
Sbjct: 357 RVNDYLIEVYMNTRSYEAALKSIAKIEH--PGTRIMEAKQKIL 397
Score = 35.9 bits (80), Expect = 5.7, Method: Composition-based stats.
Identities = 32/235 (13%), Positives = 60/235 (25%), Gaps = 10/235 (4%)
Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF-----AGVARKSLLMS 100
L V+ + VY A + E+ + KA + F D + + L+
Sbjct: 128 TLLKEVSPLYQDDAVYNLAYIDYVEKRYDKALKSFQSLQNDAVYAALVPYYIGEIYLVKG 187
Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
+ Q + E + + L A + + +
Sbjct: 188 NYQQARTVAKAYLEQYPAKKDVPQMERIWGEACFGLNDYQAAIPPLERYRESVSHPQRKP 247
Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY---YLKRGEYVAAIPRFQLVL 217
+ Y Y K A + A + YL E A F+
Sbjct: 248 LYELGMSYYYTGVYSKAAATLGEMASVHDALSQNAYLHMGLAYLNLKERNRARMAFEQAA 307
Query: 218 ANYSDAEHAEEAMARLVEAYVALAL--MDEAREVVSLIQERYPQGYWARYVETLV 270
D + E+A+ + E+ V +P + V +
Sbjct: 308 NFSFDPKVKEQALYNYALCIHETSYSPFAESVTVFERFLNEFPNSPYTERVNDYL 362
>gi|319639870|ref|ZP_07994599.1| hypothetical protein HMPREF9011_00196 [Bacteroides sp. 3_1_40A]
gi|317388534|gb|EFV69384.1| hypothetical protein HMPREF9011_00196 [Bacteroides sp. 3_1_40A]
Length = 960
Score = 49.0 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 31/213 (14%), Positives = 67/213 (31%), Gaps = 22/213 (10%)
Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
+Y + K++N+ A +F + ++ + + + + +
Sbjct: 466 ALYNLGYTYFKQKNYGNAGTWFTRFVDRGSINERTMQADAYNRIGDCNFYDRRFEQARQD 525
Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
+ DY Y Q ++R++ Y S Y+ A
Sbjct: 526 YARAVEIDPSLGDYSLYQEAFVRGLQRDYNGKVQT--------LNRLISDYPESQYMDDA 577
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
+ E GR +++ + AI RF +++ + ++ A A + Y
Sbjct: 578 LY--------------EQGRAFVQMEDNANAIARFNILVKKFPESNVARRAANEIGLLYY 623
Query: 239 ALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
EA + + YP AR + +K
Sbjct: 624 QDDKYPEAIQAYKQVIAGYPGSEEARLAQRDLK 656
Score = 47.5 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 18/233 (7%), Positives = 65/233 (27%), Gaps = 6/233 (2%)
Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKE----QNFSKAYEYFNQCSRDFPFAGVARKSL 97
++ L + + +++A+ + +++A + R + R
Sbjct: 384 EAKQKILFRLGTQAFANARFQEALELFNQSLAVGQYNQATKADAYFWRGESNYRLDRFPQ 443
Query: 98 LMSAFVQY-SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
+ + Y + G + R ++
Sbjct: 444 AGNDYRLYLEFATSKNGQEYGLALYNLGYTYFKQKNYGNAGTWFTRFVDRGSINERTMQA 503
Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK-RGEYVAAIPRFQL 215
+ + L + + + +Y +
Sbjct: 504 DAYNRIGDCNFYDRRFEQARQDYARAVEIDPSLGDYSLYQEAFVRGLQRDYNGKVQTLNR 563
Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
++++Y ++++ ++A+ A+V + A +++ +++P+ AR
Sbjct: 564 LISDYPESQYMDDALYEQGRAFVQMEDNANAIARFNILVKKFPESNVARRAAN 616
Score = 39.4 bits (89), Expect = 0.48, Method: Composition-based stats.
Identities = 19/223 (8%), Positives = 59/223 (26%), Gaps = 15/223 (6%)
Query: 61 YEKAVLFLKEQNFSKA---YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
Y ++L + N+ +A + + + + + F
Sbjct: 170 YYIGEIYLVKGNYQQARTVAKAYLEQYPAKKDVPQMERIWGEACFGLNDYQAAIPPLERY 229
Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE---------- 167
E ++ + + + L + +
Sbjct: 230 RESVSHPQRKPLYELGMSYYYTGVYSKAAATLGEMASVHDALSQNAYLHMGLAYLNLKER 289
Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
+ + A F + A + + + ++ F+ L + ++ + E
Sbjct: 290 NRARMAFEQAANFSFDPKVKEQALYNYALCIHETSYSPFAESVTVFERFLNEFPNSPYTE 349
Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
L+E Y+ + A + ++ I+ P + ++
Sbjct: 350 RVNDYLIEVYMNTRSYEAALKSIAKIEH--PGTRIMEAKQKIL 390
Score = 35.9 bits (80), Expect = 5.8, Method: Composition-based stats.
Identities = 32/235 (13%), Positives = 60/235 (25%), Gaps = 10/235 (4%)
Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF-----AGVARKSLLMS 100
L V+ + VY A + E+ + KA + F D + + L+
Sbjct: 121 TLLKEVSPLYQDDAVYNLAYIDYVEKRYDKALKSFQSLQNDAVYAALVPYYIGEIYLVKG 180
Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
+ Q + E + + L A + + +
Sbjct: 181 NYQQARTVAKAYLEQYPAKKDVPQMERIWGEACFGLNDYQAAIPPLERYRESVSHPQRKP 240
Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY---YLKRGEYVAAIPRFQLVL 217
+ Y Y K A + A + YL E A F+
Sbjct: 241 LYELGMSYYYTGVYSKAAATLGEMASVHDALSQNAYLHMGLAYLNLKERNRARMAFEQAA 300
Query: 218 ANYSDAEHAEEAMARLVEAYVALAL--MDEAREVVSLIQERYPQGYWARYVETLV 270
D + E+A+ + E+ V +P + V +
Sbjct: 301 NFSFDPKVKEQALYNYALCIHETSYSPFAESVTVFERFLNEFPNSPYTERVNDYL 355
>gi|307565537|ref|ZP_07628017.1| outer membrane assembly lipoprotein YfiO [Prevotella amnii CRIS
21A-A]
gi|307345696|gb|EFN91053.1| outer membrane assembly lipoprotein YfiO [Prevotella amnii CRIS
21A-A]
Length = 309
Score = 49.0 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 43/288 (14%), Positives = 85/288 (29%), Gaps = 29/288 (10%)
Query: 5 LGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKA 64
+ R I IF + + K I + V YE A
Sbjct: 22 ISRIILIFASQIVNMKK--SIILSFCVALIFCSCA------HEYNVVYKSADPEYKYEFA 73
Query: 65 VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY 124
+ F+ ++SL M A +Y Y A+ + ++Y Y
Sbjct: 74 KELFVKGKFASVIPLLQDLVVTLKGTENGQESLYMLAKAEYGMKDYDAASEIFKKYYQSY 133
Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184
P+ + + +G + + DQ T +Q ++ + + + A+ +
Sbjct: 134 PKGIYAEMAQFNIGQCLYENAPEPRLDQTPTIAAIQAFQDYLDLFPDGKMKEKAQERMFE 193
Query: 185 GRNQLAAKEV-----------EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE-AMAR 232
+++L KE G Y A + Q + +Y + EE A+
Sbjct: 194 LQDKLVKKEYLNAKLYYNLGSYFGNCTSGGNNYEACVITAQNAINDYPYSNLREEFAILI 253
Query: 233 LVEAYV---------ALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+ + L +A + ++P E +K
Sbjct: 254 MKSKFELAHMSVDAKKLQRFQDAEDECYGFINQFPDSKERHTAEEYIK 301
>gi|150003900|ref|YP_001298644.1| hypothetical protein BVU_1333 [Bacteroides vulgatus ATCC 8482]
gi|149932324|gb|ABR39022.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482]
Length = 967
Score = 49.0 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 31/213 (14%), Positives = 67/213 (31%), Gaps = 22/213 (10%)
Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
+Y + K++N+ A +F + ++ + + + + +
Sbjct: 473 ALYNLGYTYFKQKNYGNAGTWFTRFVDRGSINERTMQADAYNRIGDCNFYDRRFEQARQD 532
Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
+ DY Y Q ++R++ Y S Y+ A
Sbjct: 533 YARAVEIDPSLGDYSLYQEAFVRGLQRDYNGKVQT--------LNRLISDYPESQYMDDA 584
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
+ E GR +++ + AI RF +++ + ++ A A + Y
Sbjct: 585 LY--------------EQGRAFVQMEDNANAIARFNILVKKFPESNVARRAANEIGLLYY 630
Query: 239 ALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
EA + + YP AR + +K
Sbjct: 631 QDDKYPEAIQAYKQVIAGYPGSEEARLAQRDLK 663
Score = 47.5 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 19/233 (8%), Positives = 66/233 (28%), Gaps = 6/233 (2%)
Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKE----QNFSKAYEYFNQCSRDFPFAGVARKSL 97
++ L + + +++A+ F + +++A + R + R
Sbjct: 391 EAKQKILFRLGTQAFANARFQEALEFFNQSLAVGQYNQATKADAYFWRGESNYRLDRFPQ 450
Query: 98 LMSAFVQY-SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
+ + Y + G + R ++
Sbjct: 451 AGNDYRLYLEFATSKNGQEYGLALYNLGYTYFKQKNYGNAGTWFTRFVDRGSINERTMQA 510
Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK-RGEYVAAIPRFQL 215
+ + L + + + +Y +
Sbjct: 511 DAYNRIGDCNFYDRRFEQARQDYARAVEIDPSLGDYSLYQEAFVRGLQRDYNGKVQTLNR 570
Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
++++Y ++++ ++A+ A+V + A +++ +++P+ AR
Sbjct: 571 LISDYPESQYMDDALYEQGRAFVQMEDNANAIARFNILVKKFPESNVARRAAN 623
Score = 39.4 bits (89), Expect = 0.48, Method: Composition-based stats.
Identities = 19/223 (8%), Positives = 59/223 (26%), Gaps = 15/223 (6%)
Query: 61 YEKAVLFLKEQNFSKA---YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
Y ++L + N+ +A + + + + + F
Sbjct: 177 YYIGEIYLVKGNYQQARTVAKAYLEQYPAKKDVPQMERIWGEACFGLNDYQAAIPPLERY 236
Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE---------- 167
E ++ + + + L + +
Sbjct: 237 RESVSHPQRKPLYELGMSYYYTGVYSKAAATLGEMASVHDALSQNAYLHMGLAYLNLKER 296
Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
+ + A F + A + + + ++ F+ L + ++ + E
Sbjct: 297 NRARMAFEQAANFSFDPKVKEQALYNYALCIHETSYSPFAESVTVFERFLNEFPNSPYTE 356
Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
L+E Y+ + A + ++ I+ P + ++
Sbjct: 357 RVNDYLIEVYMNTRSYEAALKSIAKIEH--PGTRIMEAKQKIL 397
Score = 35.9 bits (80), Expect = 5.9, Method: Composition-based stats.
Identities = 32/235 (13%), Positives = 60/235 (25%), Gaps = 10/235 (4%)
Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF-----AGVARKSLLMS 100
L V+ + VY A + E+ + KA + F D + + L+
Sbjct: 128 TLLKEVSPLYQDDAVYNLAYIDYVEKRYDKALKSFQSLQNDAVYAALVPYYIGEIYLVKG 187
Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
+ Q + E + + L A + + +
Sbjct: 188 NYQQARTVAKAYLEQYPAKKDVPQMERIWGEACFGLNDYQAAIPPLERYRESVSHPQRKP 247
Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY---YLKRGEYVAAIPRFQLVL 217
+ Y Y K A + A + YL E A F+
Sbjct: 248 LYELGMSYYYTGVYSKAAATLGEMASVHDALSQNAYLHMGLAYLNLKERNRARMAFEQAA 307
Query: 218 ANYSDAEHAEEAMARLVEAYVALAL--MDEAREVVSLIQERYPQGYWARYVETLV 270
D + E+A+ + E+ V +P + V +
Sbjct: 308 NFSFDPKVKEQALYNYALCIHETSYSPFAESVTVFERFLNEFPNSPYTERVNDYL 362
>gi|148262449|ref|YP_001229155.1| chromosome segregation ATPase-like protein [Geobacter
uraniireducens Rf4]
gi|146395949|gb|ABQ24582.1| Chromosome segregation ATPase-like protein [Geobacter
uraniireducens Rf4]
Length = 1030
Score = 49.0 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 14/90 (15%), Positives = 30/90 (33%)
Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
+ ++ G ++ ++ A+ + +L Y D + A+ L A
Sbjct: 27 NPAFCLDSEDSQIFIAGFNSYQKRDFQTAVDKMSALLKKYPDTPLRDMAIFWLARANYKA 86
Query: 241 ALMDEAREVVSLIQERYPQGYWARYVETLV 270
EA ++ + YP VE +
Sbjct: 87 GHRQEAARYMAQFFKEYPDSPLKATVEDEL 116
>gi|296328452|ref|ZP_06870973.1| conserved hypothetical protein [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
gi|296154418|gb|EFG95215.1| conserved hypothetical protein [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
Length = 417
Score = 49.0 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 26/267 (9%), Positives = 66/267 (24%), Gaps = 35/267 (13%)
Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLK--EQNFSKAYEYFNQCSRDFPFAGVARKS 96
+ + +RE+Y+ + + ++ A + +A
Sbjct: 149 GSLNRKISVAVIAKYDFSERELYDVIMQDFESKNKDLENAVTLYKMMFPAGRYAKEVNYL 208
Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
L A+ + +A + + + + ++ + +
Sbjct: 209 FLKYAYDIKNTSLMNEALAGVK-TDFSSYSDSEKATILRVAKLTNKDIFVPSETYNTSNP 267
Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV---------------------- 194
+ + + + T A EV
Sbjct: 268 ELKSALQEYIGNKGSLDKNDKVFIEKTKKEAPETANEVVRDKLKAVIDGTAPVKVGSSSA 327
Query: 195 ---EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE-------EAMARLVEAYVALALMD 244
E ++ + N+ + E E + +Y L
Sbjct: 328 SKSENKGESYYDKAMKNLNSNPRVAIENFKKSLSTEKIQDKKPEIYYNIASSYAKLGNKV 387
Query: 245 EAREVVSLIQERYPQGYWARYVETLVK 271
E + + L+++ +P WA+ E L K
Sbjct: 388 EVTKYLRLLKQEFPNSEWAKKSEALTK 414
>gi|308049996|ref|YP_003913562.1| tol-pal system protein YbgF [Ferrimonas balearica DSM 9799]
gi|307632186|gb|ADN76488.1| tol-pal system protein YbgF [Ferrimonas balearica DSM 9799]
Length = 244
Score = 49.0 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 16/83 (19%), Positives = 35/83 (42%), Gaps = 2/83 (2%)
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
A + K + AIP F+ + Y D+ + A L + + EA
Sbjct: 125 EADAYTQALNLATKERRFDDAIPAFRRFIEQYPDSSYTPNAYYWLGQLLYNQGQLAEAGT 184
Query: 249 VVSLIQERYPQGYWARYVETLVK 271
+ + + ++YP+ ++ ++L+K
Sbjct: 185 MFATVADKYPKS--SKRSDSLLK 205
>gi|299137478|ref|ZP_07030660.1| Lytic transglycosylase catalytic [Acidobacterium sp. MP5ACTX8]
gi|298600883|gb|EFI57039.1| Lytic transglycosylase catalytic [Acidobacterium sp. MP5ACTX8]
Length = 801
Score = 49.0 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 27/206 (13%), Positives = 59/206 (28%), Gaps = 9/206 (4%)
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
+ A + N +A + P + A ++ A + L
Sbjct: 260 FTLAKAYQASGNTQQAAALYRGLYTRDPLSNEAAEAKTQLAAMNV---------PLTAAE 310
Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
Q+ ++ Y + Y + ++ A + L+ + + +
Sbjct: 311 RKQHADAMFNAKHYDIAQEEYRALQKNDSELSSADRDALEIYAAVCDLRLKKLSRGDVDH 370
Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
G + A K G Q +L+ Y + EEA+ Y+
Sbjct: 371 LPVTGDDSAALKMYLQSELARNEGRTDEHDRLVQQMLSQYPQSRWLEEALYSGGNMYLLK 430
Query: 241 ALMDEAREVVSLIQERYPQGYWARYV 266
A +L+ + +P+ +A
Sbjct: 431 RDSAHAIAEYTLLGQHFPRSTYAPNA 456
Score = 43.6 bits (100), Expect = 0.032, Method: Composition-based stats.
Identities = 23/242 (9%), Positives = 53/242 (21%), Gaps = 14/242 (5%)
Query: 43 SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS------ 96
L ++ E + A +++ A E + ++ A +
Sbjct: 294 EAKTQLAAMNVPLTAAERKQHADAMFNAKHYDIAQEEYRALQKNDSELSSADRDALEIYA 353
Query: 97 ----LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
L + + + Q +
Sbjct: 354 AVCDLRLKKLSRGDVDHLPVTGDDSAALKMYLQSELARNEGRTDEHDRLVQQMLSQYPQS 413
Query: 153 RATKLMLQY--MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY-YLKRGEYVAA 209
R + L +++R + + R+ A + + Y A
Sbjct: 414 RWLEEALYSGGNMYLLKRDSAHAIAEYTLLGQHFPRSTYAPNAHWRAAWLSYRLRHYGDA 473
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVAL-ALMDEAREVVSLIQERYPQGYWARYVET 268
+ NY A+ Y + +A + Y Y+A
Sbjct: 474 ARLMDEQITNYPAGTEIPGALYWRGRMYEDVEGNFGQAINYYKTLDASYVNSYYAMLARQ 533
Query: 269 LV 270
+
Sbjct: 534 RI 535
>gi|183598190|ref|ZP_02959683.1| hypothetical protein PROSTU_01568 [Providencia stuartii ATCC 25827]
gi|188020356|gb|EDU58396.1| hypothetical protein PROSTU_01568 [Providencia stuartii ATCC 25827]
Length = 255
Score = 49.0 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 18/124 (14%), Positives = 42/124 (33%), Gaps = 14/124 (11%)
Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
+ + + ++ Y S Y A +++ +K+
Sbjct: 143 MKSKSKAQIDEAIGALQSFIKSYPKSSYQSNANYWLGQLNYNKGSKD------------- 189
Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
A F V+ Y ++ + EA+ ++ D+A+ V + ++YP A+
Sbjct: 190 -DAAFYFATVVKEYPKSQKSSEALYKVGLIMQDKGQKDKAKAVYQQVLKQYPNSAGAKLA 248
Query: 267 ETLV 270
E +
Sbjct: 249 EKKL 252
>gi|19703800|ref|NP_603362.1| hypothetical protein FN0465 [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
gi|19713946|gb|AAL94661.1| Hypothetical protein FN0465 [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
Length = 410
Score = 49.0 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 26/267 (9%), Positives = 66/267 (24%), Gaps = 35/267 (13%)
Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLK--EQNFSKAYEYFNQCSRDFPFAGVARKS 96
+ + +RE+Y+ + + ++ A + +A
Sbjct: 142 GSLNRKISVAVIAKYDFSERELYDVIMQDFESKNKDLENAVTLYKMMFPAGRYAKEVNYL 201
Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
L A+ + +A + + + + ++ + +
Sbjct: 202 FLKYAYDIKNTSLMNEALAGVK-TDFSSYSDSEKATILRVAKLTNKDIFVPSETYNTSNP 260
Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV---------------------- 194
+ + + + T A EV
Sbjct: 261 ELKSALQEYIGNKGSLDKNDKVFIEKTKKEAPETANEVVRDKLKAVIDGTAPVKVGSSSA 320
Query: 195 ---EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE-------EAMARLVEAYVALALMD 244
E ++ + N+ + E E + +Y L
Sbjct: 321 SKSENKGESYYDKAMKNLNSNPRVAIENFKKSLSTEKIQDKKPEIYYNIASSYAKLGNKV 380
Query: 245 EAREVVSLIQERYPQGYWARYVETLVK 271
E + + L+++ +P WA+ E L K
Sbjct: 381 EVTKYLRLLKQEFPNSEWAKKSEALTK 407
>gi|254426965|ref|ZP_05040672.1| tol-pal system protein YbgF, putative [Alcanivorax sp. DG881]
gi|196193134|gb|EDX88093.1| tol-pal system protein YbgF, putative [Alcanivorax sp. DG881]
Length = 254
Score = 48.6 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 23/211 (10%), Positives = 54/211 (25%), Gaps = 3/211 (1%)
Query: 63 KAVLFLKEQNFSKAY---EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
+A ++ + A + + + L + A
Sbjct: 39 QAQSQMRNTSTPSAAVNEDGLMVLMQQQQQFEEQIQQLQGQLEELRHELSTLKEAERERY 98
Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
+ + A+ D D+ A + + + +
Sbjct: 99 LDLDTRINTLAERGQTEQPEDGAEGDNDPEADRAAYNAAKDKLVSGDFKGAIAGFEAYLG 158
Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
+ A K + A FQ V +Y D A +++ L
Sbjct: 159 EFPQGMSRANAHFWAGKLYSDQKEPDLKKAEGHFQAVADDYPDHSKAPKSLYILAVMQAK 218
Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETLV 270
+ A+ + + ++YP A ++L+
Sbjct: 219 AGEVSPAKVNLHKLIKQYPDSSEAGQAKSLL 249
Score = 37.1 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 14/133 (10%), Positives = 35/133 (26%), Gaps = 6/133 (4%)
Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
+ + + D R Y A L +F A F +FP +
Sbjct: 112 GQTEQPEDGAEGDNDPEADRAAYNAAKDKLVSGDFKGAIAGFEAYLGEFPQGMSRANAHF 171
Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
+ + + + G DY + ++ +
Sbjct: 172 WAGKLYSDQKEPDLKKAEGHFQAVAD------DYPDHSKAPKSLYILAVMQAKAGEVSPA 225
Query: 159 LQYMSRIVERYTN 171
+ +++++Y +
Sbjct: 226 KVNLHKLIKQYPD 238
>gi|283780564|ref|YP_003371319.1| hypothetical protein Psta_2793 [Pirellula staleyi DSM 6068]
gi|283439017|gb|ADB17459.1| Tetratricopeptide TPR_2 repeat protein [Pirellula staleyi DSM 6068]
Length = 2545
Score = 48.6 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 14/82 (17%), Positives = 33/82 (40%), Gaps = 1/82 (1%)
Query: 181 YVTVGRNQLAAKEVEI-GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
+ A + + G++ + ++ AI + ++L + D A +A +L + Y
Sbjct: 2325 MEDYPDPKYAPRVAYLLGQFAQELSQWDEAIRSYDMILRQFPDHTLAPDAQYKLAQCYEE 2384
Query: 240 LALMDEAREVVSLIQERYPQGY 261
D+A E + +P+
Sbjct: 2385 AGDFDQALEAYVTLAATHPKSP 2406
Score = 48.3 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 39/227 (17%), Positives = 71/227 (31%), Gaps = 22/227 (9%)
Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
R+V D R Y + + +A ++ R FP +A + A
Sbjct: 2322 REVMEDYPDPKYAPRVAYLLGQFAQELSQWDEAIRSYDMILRQFPDHTLAPDAQYKLAQC 2381
Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
AG + QA +P+S + V I D Y + Q
Sbjct: 2382 YEEAGDFDQALEAYVTLAATHPKSPLIPNVMI--------RISDYFYKAEKFDIAAQVGE 2433
Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
+ +ER+ + F +G+ Y K +Y A F + D
Sbjct: 2434 KFLERFEGHQHAPRLAFR--------------VGQCYYKSKQYATAGKSFDQFSKLFPDD 2479
Query: 224 EHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
+A+ E++ + EA + + +Y + A+Y +
Sbjct: 2480 ALGADALFWSGESFRLGGNLREAFIRYNNCRWKYAESEAAKYARGRL 2526
Score = 41.7 bits (95), Expect = 0.10, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 34/91 (37%)
Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
RF + +L + R K+ + A + V+ +Y D ++A L +
Sbjct: 2285 ETRFRIAESYFELFKSHKTLERDDEKKTDLEAGRRILREVMEDYPDPKYAPRVAYLLGQF 2344
Query: 237 YVALALMDEAREVVSLIQERYPQGYWARYVE 267
L+ DEA +I ++P A +
Sbjct: 2345 AQELSQWDEAIRSYDMILRQFPDHTLAPDAQ 2375
>gi|156934763|ref|YP_001438678.1| tol-pal system protein YbgF [Cronobacter sakazakii ATCC BAA-894]
gi|156533017|gb|ABU77843.1| hypothetical protein ESA_02603 [Cronobacter sakazakii ATCC BAA-894]
Length = 265
Score = 48.6 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 20/121 (16%), Positives = 42/121 (34%), Gaps = 14/121 (11%)
Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
D+ + S +++Y +S Y A +++ K+ A
Sbjct: 156 QDKSRQDEAITAFSNFIKQYPDSTYQPNAHYWLGQLNYNKGKKD--------------DA 201
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
F V+ NY + A +AM ++ +A+ V + +YP A+ +
Sbjct: 202 AYYFASVVKNYPKSPKAADAMYKVGVIMQDKGDTAKAKAVYQQVISKYPGTDGAKQAQKR 261
Query: 270 V 270
+
Sbjct: 262 L 262
Score = 47.5 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 22/74 (29%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ AI F + Y D+ + A L + D+A +
Sbjct: 148 YNAAIALVQDKSRQDEAITAFSNFIKQYPDSTYQPNAHYWLGQLNYNKGKKDDAAYYFAS 207
Query: 253 IQERYPQGYWARYV 266
+ + YP+ A
Sbjct: 208 VVKNYPKSPKAADA 221
>gi|170031403|ref|XP_001843575.1| transmembrane and TPR repeat-containing protein [Culex
quinquefasciatus]
gi|167869835|gb|EDS33218.1| transmembrane and TPR repeat-containing protein [Culex
quinquefasciatus]
Length = 677
Score = 48.6 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 19/215 (8%), Positives = 49/215 (22%), Gaps = 8/215 (3%)
Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
Y+ L+ E + A ++ + A +L + + +
Sbjct: 451 PDYEAAHMNLGNLYRDEGKYELALKHLKKAIEIHEDFHTAWMNLGIVYAAVKNHAEALAC 510
Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYA---QMIRDVPYDQRATKLMLQYMSRIVERYT 170
+ YP Y + + + M + +
Sbjct: 511 YQRALQRQKHYPNCVFNLGNLYNDMGNASLALATWNETVRQDPQHIKAWNNMINVYDNAN 570
Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
+ K G ++ A + ++ + E+ +
Sbjct: 571 RQQEILVLTHRALGHLPDNPTILSSRATALAKLGRFLDAEQIYAQLVHAHPR---VEKYL 627
Query: 231 ARLVEAYVALALMDEARE-VVSLIQERYPQGYWAR 264
+ Y +D+A + P A+
Sbjct: 628 QNMGVLYHRWGKLDKAERLYRQALALN-PNSDMAK 661
>gi|319900806|ref|YP_004160534.1| Tetratricopeptide TPR_1 repeat-containing protein [Bacteroides
helcogenes P 36-108]
gi|319415837|gb|ADV42948.1| Tetratricopeptide TPR_1 repeat-containing protein [Bacteroides
helcogenes P 36-108]
Length = 1010
Score = 48.6 bits (113), Expect = 9e-04, Method: Composition-based stats.
Identities = 31/222 (13%), Positives = 63/222 (28%), Gaps = 22/222 (9%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
+ Y A + ++++S A YF + + + +
Sbjct: 510 ERNTEMFALAYYNLAYIAFNQKDYSTAEGYFRSFIQLEKGKNPTALADACNRIGDCNLHV 569
Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
+ + + + DY +Y + + +L +Y
Sbjct: 570 RRFDEAKRYYTKAESLGTPAGDYSFYQLALVAGLQKDYNGKISLLNRLANKY-------- 621
Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
E GR Y++ AI F+ +L+ Y ++ + +A
Sbjct: 622 --------------PSSPYAVNALYEKGRSYVQSNNSHQAIAAFRELLSKYPESPASRKA 667
Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
A + Y D A E + +YP AR +K
Sbjct: 668 AAEIGLLYYQNNDYDRAIEAYKHVITQYPGSEEARLAMRDLK 709
Score = 42.5 bits (97), Expect = 0.067, Method: Composition-based stats.
Identities = 31/245 (12%), Positives = 63/245 (25%), Gaps = 18/245 (7%)
Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ-CSRDFPFAGVARKSLL 98
+ R + Q+ +++ F +A YF Q + +L
Sbjct: 423 KSIERITHPGKAILEAKQKILFQLGTQSFANAGFEQAIGYFGQSIALGQYNLQTKADALY 482
Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
Y + ++AA EY+T E + ++Y +
Sbjct: 483 WLGESCYRLNRMREAARYFNEYLTLTGERNTEMFALAYYNLAYIAFNQKDYSTAEGYFRS 542
Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK---------------- 202
+ + + R AK L
Sbjct: 543 FIQLEKGKNPTALADACNRIGDCNLHVRRFDEAKRYYTKAESLGTPAGDYSFYQLALVAG 602
Query: 203 -RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
+ +Y I + Y + +A A+ +YV +A + +YP+
Sbjct: 603 LQKDYNGKISLLNRLANKYPSSPYAVNALYEKGRSYVQSNNSHQAIAAFRELLSKYPESP 662
Query: 262 WARYV 266
+R
Sbjct: 663 ASRKA 667
Score = 35.9 bits (80), Expect = 5.4, Method: Composition-based stats.
Identities = 33/223 (14%), Positives = 65/223 (29%), Gaps = 15/223 (6%)
Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
+ +YEK +++ N +A F + +P + +RK+ + Y
Sbjct: 620 KYPSSPYAVNALYEKGRSYVQSNNSHQAIAAFRELLSKYPESPASRKAAAEIGLLYYQNN 679
Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSY---------------AQMIRDVPYDQR 153
Y +A + ITQYP S+ + Y ++
Sbjct: 680 DYDRAIEAYKHVITQYPGSEEARLAMRDLKSIYVDANRIDEFAALASQMPGEIRFDPSEQ 739
Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213
+ + ++ +S R+ + K + A+
Sbjct: 740 DSLTYMAAEKIYMKGEASSAKNSLTRYLQNFPNGSFSLNAHYYLCIIGKEQKDDEAVLEH 799
Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
L Y D ++EEA+ E EA +Q +
Sbjct: 800 AGKLLEYPDNTYSEEALLMHGEILFNRKQYAEAIADYKKLQTK 842
>gi|193214935|ref|YP_001996134.1| putative lipoprotein [Chloroherpeton thalassium ATCC 35110]
gi|193088412|gb|ACF13687.1| putative lipoprotein [Chloroherpeton thalassium ATCC 35110]
Length = 319
Score = 48.6 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 37/260 (14%), Positives = 80/260 (30%), Gaps = 14/260 (5%)
Query: 11 IFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKE 70
+ + A Q + + + L + + ++ A +
Sbjct: 11 LIQKQAVQKFSWIFIFGAILGFFSLTACSS--------VAPPVSEAPADQFDYAKRLYEA 62
Query: 71 QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
+++ A + S + + + A Y + +Y A + + P +K
Sbjct: 63 EDYQDAIMELQRISYNIRATELEDDVMFYLAQSYYKSEQYLLAVDTFKRLVRNTPGTKFA 122
Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
VY+ + M Y + +DQ+ T+L +Q ++ Y + A + N A
Sbjct: 123 RVVYFQIAMCYYNLSMPYQFDQQYTQLTIQQFQIYIDGYPAADSASIAAQIAEL--NNYA 180
Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL----VEAYVALALMDEA 246
+E + Y G+ A + + + E +AR E Y+ L A
Sbjct: 181 DREKDNPEYQKLLGKLKAQYGLYDTLRIAEEKIRESREKLARKTFESAEQYIQLRAYKSA 240
Query: 247 REVVSLIQERYPQGYWARYV 266
+ Y +
Sbjct: 241 EVYFDEVILGYSDSPYYEKA 260
Score = 45.2 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 28/208 (13%), Positives = 69/208 (33%), Gaps = 2/208 (0%)
Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR--KSLLMSAFVQYSAGKYQ 111
++ A + K + + A + F + R+ P AR + + S
Sbjct: 83 ELEDDVMFYLAQSYYKSEQYLLAVDTFKRLVRNTPGTKFARVVYFQIAMCYYNLSMPYQF 142
Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
+ + + ++ + + ++ +Y
Sbjct: 143 DQQYTQLTIQQFQIYIDGYPAADSASIAAQIAELNNYADREKDNPEYQKLLGKLKAQYGL 202
Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231
++ A + R +LA K E Y++ Y +A F V+ YSD+ + E+A+
Sbjct: 203 YDTLRIAEEKIRESREKLARKTFESAEQYIQLRAYKSAEVYFDEVILGYSDSPYYEKALL 262
Query: 232 RLVEAYVALALMDEAREVVSLIQERYPQ 259
++ + + + + + R+P+
Sbjct: 263 GKIDVQMTRKKWSDVLDTIEKYKARFPE 290
>gi|21672663|ref|NP_660730.1| hypothetical protein BUsg389 [Buchnera aphidicola str. Sg
(Schizaphis graminum)]
gi|25009590|sp|Q8K9E8|Y389_BUCAP RecName: Full=UPF0169 protein BUsg_389
gi|21623300|gb|AAM67941.1| hypothetical 27.8 kDa lipoprotein [Buchnera aphidicola str. Sg
(Schizaphis graminum)]
Length = 243
Score = 48.6 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 47/248 (18%), Positives = 101/248 (40%), Gaps = 17/248 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K F I + + + + +Y+K LKE+NF KA
Sbjct: 1 MKKKNTVFIFMILFLSFAIYSKNLKNYNLILNNY-------LYQKCRKELKEKNFYKAIF 53
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+ + K + + Y + A EE+I +YP+ N+DY++Y+
Sbjct: 54 DLKKIENNHAINFNNDKIKMNLIYAYYKVSDFNTAEKNIEEFIKKYPKHLNIDYIFYIQS 113
Query: 139 MSYAQMIRDVPYDQRATK----------LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
+ + + + ++ + + + V Y NS YV A+ + + +
Sbjct: 114 LINISLDKKIFHNVFPIQIYKSNPIYAIKAFFQLKKFVYNYPNSIYVINAKKDLFYLKKR 173
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
L+ ++ I +YY +Y+A I R + +L Y + A + + + ++++AL + D A++
Sbjct: 174 LSEHDLTILKYYFYHKKYIAVINRGEEILQKYPETSAAIDTLKYMEKSFLALKIFDTAKK 233
Query: 249 VVSLIQER 256
+ +I
Sbjct: 234 ISKIILLN 241
>gi|317502715|ref|ZP_07960826.1| conserved hypothetical protein [Prevotella salivae DSM 15606]
gi|315666159|gb|EFV05715.1| conserved hypothetical protein [Prevotella salivae DSM 15606]
Length = 290
Score = 48.6 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 48/277 (17%), Positives = 91/277 (32%), Gaps = 29/277 (10%)
Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
+ + K L ++ ++ D+ YE A E +++
Sbjct: 1 MFDMKKKILIP--ICVTLLFTSCAQEFNKVYKTDNYQYK------YEFAKECYAEGKYTQ 52
Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
A A++SL M A +Y + Y+ A+ + Y YP+ + +Y
Sbjct: 53 AITLLTDLINIEKGTDNAQESLYMLAMAEYGSMDYEGASQAFKRYYQSYPKGYLAEMAHY 112
Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
G++ + + DQ T + ++ Y ++ A+ Y+ +++L KE+
Sbjct: 113 YEGLALYKSTPEPRLDQSMTISAINAFQTFLDLYPDAKLRPEAQKYLFELQDKLVLKELY 172
Query: 196 IGRYYLK-----------RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL-- 242
R Y Y A I Q L +Y EE L+++ LA
Sbjct: 173 SARLYYNLGPYFGNCSDGGNNYEARIVTCQNALKDYPYTSLREEFSLLLMKSKFELAEQS 232
Query: 243 --------MDEAREVVSLIQERYPQGYWARYVETLVK 271
+A + +YP E +K
Sbjct: 233 VESKRLERYQDAEDECYGFMNQYPDSKDKALAEKYIK 269
>gi|242279824|ref|YP_002991953.1| hypothetical protein Desal_2358 [Desulfovibrio salexigens DSM 2638]
gi|242122718|gb|ACS80414.1| hypothetical protein Desal_2358 [Desulfovibrio salexigens DSM 2638]
Length = 335
Score = 48.6 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 14/73 (19%), Positives = 36/73 (49%)
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
Y+ + A+ ++ ++ Y + + E A+ + ++ L ++A E V +E +P
Sbjct: 263 YFYHLNDVNGALRSYRRIIREYHNTPYYENALYGAIRCFMQLGQNEKAAEYVRRYEELFP 322
Query: 259 QGYWARYVETLVK 271
G + +++LV+
Sbjct: 323 DGNHVQGLDSLVR 335
>gi|224025229|ref|ZP_03643595.1| hypothetical protein BACCOPRO_01963 [Bacteroides coprophilus DSM
18228]
gi|224018465|gb|EEF76463.1| hypothetical protein BACCOPRO_01963 [Bacteroides coprophilus DSM
18228]
Length = 1004
Score = 48.6 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 30/226 (13%), Positives = 70/226 (30%), Gaps = 22/226 (9%)
Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
+ + Y +Y K++ ++KA +F +C + +
Sbjct: 497 EFATNKNSQEYGLALYNLGYCAFKQKQYNKALNWFERCVPLVASRERTVAADASNRIGDC 556
Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
+ + + DY + + ++++
Sbjct: 557 YFYARRFDEARSLYAQAVAYDPSFGDYSLFQEAFVKGLQRDYAGK--------IGTLNQL 608
Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
+ Y +S Y+ A + E GR ++ ++ AI R+ L++ Y ++
Sbjct: 609 LTAYPSSQYLDDALY--------------EQGRAFVLMEDHSNAINRYSLLVQRYPESPL 654
Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+ +A + Y D+A + YP AR + +K
Sbjct: 655 SRKAANEIGLLYYQTDQYDKAIAAYKKVITAYPGSEEARLAQRDLK 700
Score = 36.3 bits (81), Expect = 4.8, Method: Composition-based stats.
Identities = 25/223 (11%), Positives = 60/223 (26%), Gaps = 15/223 (6%)
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
Y A ++L + + +A + + A + +S Y Y A E+Y
Sbjct: 214 YYIADIYLIKGDNRQAKNLADTWLASYEGQEHASEMHRISGEAAYGLNDYTGAVKQLEQY 273
Query: 121 ITQYPESKNVDY---VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE---------- 167
M + K L + +
Sbjct: 274 RQSTENRDRKAMYKLGMSYYNMGVYSQAAACLGEATGPKDALTQNAYLHMGLAYLQLKER 333
Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
+ + + + A + + + ++ F+ L Y ++ + +
Sbjct: 334 NQARMAFEQASTMDFDRSIREQALYNYALCIHETSYSPFAESVTVFERFLNEYPNSPYTD 393
Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
+ L+E Y+ A + ++ I P + L+
Sbjct: 394 KVNDYLIEVYMNTKSYLAALKSIAKISH--PGNRILEAKQKLL 434
>gi|254304062|ref|ZP_04971420.1| hypothetical protein FNP_1732 [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|148324254|gb|EDK89504.1| hypothetical protein FNP_1732 [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
Length = 425
Score = 48.6 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 10/45 (22%), Positives = 19/45 (42%)
Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
E + +Y L E + + L+++ +P W + E L K
Sbjct: 381 PEIYYNIASSYAKLGNKVEVTKYLRLLKQEFPNSEWVKRSEALTK 425
>gi|217976964|ref|YP_002361111.1| tol-pal system protein YbgF [Methylocella silvestris BL2]
gi|217502340|gb|ACK49749.1| tol-pal system protein YbgF [Methylocella silvestris BL2]
Length = 386
Score = 48.6 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 19/113 (16%), Positives = 42/113 (37%), Gaps = 14/113 (12%)
Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
Q+ + + + +++ S Y A + +G + +R
Sbjct: 270 YGYLRQKQYEAAEKSFAAFIQKNPKSRYSADATY--------------YLGESFFQRSRP 315
Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
A ++ + Y+ + A EAM RL ++ +L ++A + I +YP
Sbjct: 316 REAAEQYLKISTQYATSARAPEAMLRLGQSLNSLGAKEQACATFAEIGRKYPN 368
>gi|256844835|ref|ZP_05550293.1| conserved hypothetical protein [Fusobacterium sp. 3_1_36A2]
gi|294785884|ref|ZP_06751172.1| conserved hypothetical protein [Fusobacterium sp. 3_1_27]
gi|256718394|gb|EEU31949.1| conserved hypothetical protein [Fusobacterium sp. 3_1_36A2]
gi|294487598|gb|EFG34960.1| conserved hypothetical protein [Fusobacterium sp. 3_1_27]
Length = 414
Score = 48.6 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 11/45 (24%), Positives = 20/45 (44%)
Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
E + +Y L E + + L+++ +P WA+ E L K
Sbjct: 370 PEIYYNIASSYAKLGNKVEVTKYLRLLKQEFPNSEWAKRSEALTK 414
>gi|239907804|ref|YP_002954545.1| hypothetical protein DMR_31680 [Desulfovibrio magneticus RS-1]
gi|239797670|dbj|BAH76659.1| hypothetical protein [Desulfovibrio magneticus RS-1]
Length = 978
Score = 48.6 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 38/218 (17%), Positives = 72/218 (33%), Gaps = 21/218 (9%)
Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
+ + R + + +L L+ N +A YFN +R +P
Sbjct: 398 NEAINVNPNSYRVPETLLQLGMLNLRVGNIPEAKGYFNVLTRKYPTDASVPMVNFAWGEY 457
Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
+ G+Y++A + + ++PESK V + + ++ R Q A
Sbjct: 458 YFDRGEYKKAEEEYKNVVEKFPESKFVREGAMGMAKTLVRLGRYKEAAQIAD-------- 509
Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
Y + + G K G++ A + L DA
Sbjct: 510 --YIDKRWPRYYTEFPQILRIT-----------GDIAYKNGDFKKARDCYMLFYNMEPDA 556
Query: 224 EHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
+ A+ +A+L + Y L A + +L + YP
Sbjct: 557 KDADLVLAKLGDIYARLGNKPGAVDFYNLAIKDYPDSE 594
Score = 46.3 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 28/209 (13%), Positives = 54/209 (25%), Gaps = 17/209 (8%)
Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
A NF A R+ + + A +E
Sbjct: 336 AAQAERLAGNFFGANNMLRSLVLSPKLKPDVREEAMHTLAGVQMDLHKDDLAGHYDEIQK 395
Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
+ + Y + + +Y V F
Sbjct: 396 AL-NEAINVNPNSYRVPETLLQLGMLNLRVGNIPEAKGYFNVLTRKYPTDASVPMVNF-- 452
Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242
G YY RGEY A ++ V+ + +++ E + + V L
Sbjct: 453 ------------AWGEYYFDRGEYKKAEEEYKNVVEKFPESKFVREGAMGMAKTLVRLGR 500
Query: 243 MDEAREVVSLIQERYPQGYWARYVETLVK 271
EA ++ I +R+P + +++
Sbjct: 501 YKEAAQIADYIDKRWP--RYYTEFPQILR 527
Score = 41.3 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 32/249 (12%), Positives = 69/249 (27%), Gaps = 29/249 (11%)
Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
TD + + + KA E + FP + R+ + A G
Sbjct: 440 KYPTDASVPMVNFAWGEYYFDRGEYKKAEEEYKNVVEKFPESKFVREGAMGMAKTLVRLG 499
Query: 109 KYQQAASLGEEYITQYPESKN-------------VDYVYYLVGMSYAQMIRDVPYDQRAT 155
+Y++AA + + ++P + + ++ D +
Sbjct: 500 RYKEAAQIADYIDKRWPRYYTEFPQILRITGDIAYKNGDFKKARDCYMLFYNMEPDAKDA 559
Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA----------------AKEVEIGRY 199
L+L + I R N P +
Sbjct: 560 DLVLAKLGDIYARLGNKPGAVDFYNLAIKDYPDSEGGLVAKMRLAEQGVHDQPTISEMFP 619
Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
+ +Y + ++ ++ ++ + A A +L + + + + ERYPQ
Sbjct: 620 LFDKPQYGSPEEIYRSIIRDHPQSPLAPLAQLKLAMWLLHQQNYPGSLKESAAYLERYPQ 679
Query: 260 GYWARYVET 268
A E
Sbjct: 680 SELAPKAEE 688
>gi|284036952|ref|YP_003386882.1| hypothetical protein Slin_2038 [Spirosoma linguale DSM 74]
gi|283816245|gb|ADB38083.1| TPR repeat-containing protein [Spirosoma linguale DSM 74]
Length = 1024
Score = 48.6 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 25/209 (11%), Positives = 58/209 (27%), Gaps = 21/209 (10%)
Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
+ +Y + ++++++A YF A + + +
Sbjct: 530 KSLYGLGYAYFNKKDYTRALPYFRDFVSRGGDADDRVQVQDATI-------RLADTYFAT 582
Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
++Y + + ++ +Y NS +V
Sbjct: 583 KQYENALRSYDQAIAQNAPDKDYASYQKALILSYVGRDAEAKAQFDQVQRQYPNSRFVDE 642
Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
+ F ++G Y AI F ++ + ++ A+ + AY
Sbjct: 643 SLFQK--------------ANVDFEKGSYQVAIQGFTKLIQDKPNSALIPAALLKRAIAY 688
Query: 238 VALALMDEAREVVSLIQERYPQGYWARYV 266
L D A I + Y + A+
Sbjct: 689 GNLQQYDPAVADYKRILDNYGESDQAQSA 717
Score = 40.5 bits (92), Expect = 0.25, Method: Composition-based stats.
Identities = 32/228 (14%), Positives = 72/228 (31%), Gaps = 23/228 (10%)
Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
+ V +++KA + ++ ++ A + F + +D P + + +LL
Sbjct: 623 AKAQFDQVQRQYPNSRFVDESLFQKANVDFEKGSYQVAIQGFTKLIQDKPNSALIPAALL 682
Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
A + +Y A + + + Y ES + + R
Sbjct: 683 KRAIAYGNLQQYDPAVADYKRILDNYGESDQAQSALLGIQNTLNDAGRPEE--------- 733
Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
S+++ +Y G + + E R G+Y AI F +
Sbjct: 734 ---FSQVLGQYKKG----------NPGSTDVERVQFENARNIYASGKYEQAIQSFLNFMQ 780
Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
Y + + +A + E+Y + A +L+ + +
Sbjct: 781 EYPASPNTNQARYYVAESYRQTNDVANALRYYNLVIAD-NKSDYLVRA 827
Score = 38.2 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 23/222 (10%), Positives = 55/222 (24%), Gaps = 14/222 (6%)
Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
+R +E A + +A + F +++P + ++ A A
Sbjct: 752 ERVQFENARNIYASGKYEQAIQSFLNFMQEYPASPNTNQARYYVAESYRQTNDVANALRY 811
Query: 117 GEEYITQYPESK------NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
I + + RA Q +++ T
Sbjct: 812 YNLVIADNKSDYLVRAATRAAELEVKQKNYGRAVRNYQLIQSRAGSKAEQVTAQLGLMDT 871
Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG--EYVAAIPRFQLVLANYSDAE---- 224
Y K + V + + + + ++ A++
Sbjct: 872 YFVYPKLDSAAIVAREIAAGGNVVPGAQNRAQLMLGKVALSRNDYKTAQADFDKTIALAK 931
Query: 225 --HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
+ EA L E E+ + E++ + +
Sbjct: 932 DIYGAEAQYYLGEILYRQKKYKESVSTLLKFNEQFSDFEYWK 973
>gi|224369817|ref|YP_002603981.1| TPR domain family protein [Desulfobacterium autotrophicum HRM2]
gi|223692534|gb|ACN15817.1| TPR domain family protein [Desulfobacterium autotrophicum HRM2]
Length = 231
Score = 48.6 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 24/57 (42%)
Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
+ A F+ L Y ++E A+ A+ L E + +L EA + YP+
Sbjct: 123 EENFHEAARLFREFLTRYPNSELADNALYWLGECHYSLGNFQEAINTFKDVVTLYPK 179
Score = 43.2 bits (99), Expect = 0.035, Method: Composition-based stats.
Identities = 23/120 (19%), Positives = 41/120 (34%), Gaps = 14/120 (11%)
Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
+ + + RY NS A +++ G + G + AI
Sbjct: 123 EENFHEAARLFREFLTRYPNSELADNALYWL--------------GECHYSLGNFQEAIN 168
Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
F+ V+ Y +A+ + AY++L D A + L+ YP E +K
Sbjct: 169 TFKDVVTLYPKGGKVPDALLKTAYAYLSLDDADRAHHYLKLVVRGYPFTPAGEKAEQKLK 228
>gi|89094845|ref|ZP_01167778.1| hypothetical protein MED92_08787 [Oceanospirillum sp. MED92]
gi|89080900|gb|EAR60139.1| hypothetical protein MED92_08787 [Oceanospirillum sp. MED92]
Length = 264
Score = 48.6 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 27/190 (14%), Positives = 52/190 (27%), Gaps = 2/190 (1%)
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
Q + + S+ + A + S +
Sbjct: 72 QIEQQDHRIKQMERQQLDRYRDLDRRISSVQQSGVAPSTVATTSSVSASAAQPSTGFQPP 131
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
P D +A + + Y + +LA +G
Sbjct: 132 KPEMVQPDAAPSDAKAYREAFGLVRE--RNYPKAIEAFTNFIKDYPQSARLANAHYWLGE 189
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
YL + A F V+ N++D A +A +L Y L ++ E + ++ +YP
Sbjct: 190 IYLAEQKPELARESFVQVITNFADHRKAPDAAYKLGIVYDQLGDKAKSVEYLDMVINKYP 249
Query: 259 QGYWARYVET 268
R +
Sbjct: 250 DSSAVRLAKE 259
Score = 38.6 bits (87), Expect = 0.84, Method: Composition-based stats.
Identities = 15/96 (15%), Positives = 33/96 (34%)
Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99
+ + Y +A ++E+N+ KA E F +D+P + +
Sbjct: 127 GFQPPKPEMVQPDAAPSDAKAYREAFGLVRERNYPKAIEAFTNFIKDYPQSARLANAHYW 186
Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
+ + K + A + IT + + + Y
Sbjct: 187 LGEIYLAEQKPELARESFVQVITNFADHRKAPDAAY 222
>gi|171463095|ref|YP_001797208.1| tol-pal system protein YbgF [Polynucleobacter necessarius subsp.
necessarius STIR1]
gi|171192633|gb|ACB43594.1| tol-pal system protein YbgF [Polynucleobacter necessarius subsp.
necessarius STIR1]
Length = 243
Score = 48.6 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 24/123 (19%), Positives = 43/123 (34%), Gaps = 2/123 (1%)
Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
P +++A L+ + + + Y LA G EY
Sbjct: 119 QPGEKKAYDDALKAFQAGNLKKADDSFAAFTAKYPKSPYLPLALY--WGGNSKYANKEYA 176
Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
AI + Q ++ Y + AM L A + A+++ S I +YP A+ +
Sbjct: 177 GAISQLQNLIKKYPNHPRIPAAMVTLGNAQLESGNKAAAKKIFSDIIAKYPDTEAAKDAQ 236
Query: 268 TLV 270
L+
Sbjct: 237 QLI 239
Score = 35.9 bits (80), Expect = 5.3, Method: Composition-based stats.
Identities = 15/101 (14%), Positives = 27/101 (26%)
Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
Y + R N V+ K + + G A F A
Sbjct: 91 KTYYQDLDTRLGNFEPRTATIEGVSGTVQPGEKKAYDDALKAFQAGNLKKADDSFAAFTA 150
Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
Y + + A+ + A A + + ++YP
Sbjct: 151 KYPKSPYLPLALYWGGNSKYANKEYAGAISQLQNLIKKYPN 191
>gi|323495159|ref|ZP_08100244.1| TPR repeat-containing protein [Vibrio brasiliensis LMG 20546]
gi|323310599|gb|EGA63778.1| TPR repeat-containing protein [Vibrio brasiliensis LMG 20546]
Length = 258
Score = 48.3 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 11/93 (11%), Positives = 28/93 (30%)
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
+F + + + + Y D+ +A+ +L E
Sbjct: 166 QFQKDYPDSSFTPNSHYWLGQLYFAKKQDKDAVKSFAAVITYKDSNKRADALVKLGEIAE 225
Query: 239 ALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+A++ + + YP A+ + +K
Sbjct: 226 RNNNSAQAKKYFQQVVDEYPNSASAKLAQARLK 258
Score = 39.0 bits (88), Expect = 0.71, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 29/79 (36%), Gaps = 3/79 (3%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
LK+ +Y AI FQ +Y D+ + L + Y A +A + +
Sbjct: 144 YQNAVDLILKKRDYTGAIAAFQQFQKDYPDSSFTPNSHYWLGQLYFAKKQDKDAVKSFAA 203
Query: 253 IQERYPQGYWARYVETLVK 271
+ Y + + LVK
Sbjct: 204 VIT-YKDSN--KRADALVK 219
>gi|254417406|ref|ZP_05031148.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
PCC 7420]
gi|196175841|gb|EDX70863.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
PCC 7420]
Length = 250
Score = 48.3 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 31/208 (14%), Positives = 62/208 (29%), Gaps = 6/208 (2%)
Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL-GE 118
+++KA+ ++Q++ +A F Q + R L + Q +
Sbjct: 32 LFQKAIALYQQQDYPEAETVFRQVIHRQRSNDMVRLLLGNTLLAQNKWDEAVAVFQDLIA 91
Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS--RIVERYTNSPYVK 176
+ G M QR + S I+ +
Sbjct: 92 RSPKTVDGYVKLAQALIEQGKLDEAMPIVEELIQRHPQNTDIPFSVGLILSNINRLDTLI 151
Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
+ ++ A + + ++ + + AAI +Q + +A L +A
Sbjct: 152 ESYQTLSQQSPDKAILRLNLANSWMIQENWQAAIDEYQEAIRL---NIKKPQAYWYLGDA 208
Query: 237 YVALALMDEAREVVSLIQERYPQGYWAR 264
+DEA V RYP A+
Sbjct: 209 LRQKGQLDEALSVWREAIVRYPNDQEAQ 236
>gi|218130941|ref|ZP_03459745.1| hypothetical protein BACEGG_02543 [Bacteroides eggerthii DSM 20697]
gi|317476252|ref|ZP_07935503.1| outer membrane assembly lipoprotein YfiO [Bacteroides eggerthii
1_2_48FAA]
gi|217987285|gb|EEC53616.1| hypothetical protein BACEGG_02543 [Bacteroides eggerthii DSM 20697]
gi|316907663|gb|EFV29366.1| outer membrane assembly lipoprotein YfiO [Bacteroides eggerthii
1_2_48FAA]
Length = 267
Score = 48.3 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 40/226 (17%), Positives = 77/226 (34%), Gaps = 15/226 (6%)
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
YE A + + +++A N+ A +SL M Y+ YQ AA +Y
Sbjct: 34 YEAAKNYFAKGQYNRAATLLNELIAILKGTDKAEESLYMLGMSYYNQNDYQTAAQTFTQY 93
Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
YP + + G + + DQ T +Q + +E + NS A+
Sbjct: 94 YNVYPRGTFTELARFHAGKALYLDTPEPRLDQSGTYNAIQQLQMFLEYFPNSAKKDEAQN 153
Query: 181 YVTVGRNQLAAKEV-----EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
+ +++L KE Y + + Q L +Y E+ ++
Sbjct: 154 MIFALQDKLVMKEYLSAKLYYNLGNYLGNNYESCVITAQNALKDYPYTNMREDLSILILR 213
Query: 236 AYVALA----------LMDEAREVVSLIQERYPQGYWARYVETLVK 271
A +A EA + + +P+ + + + + K
Sbjct: 214 AKYEMAVFSVEDKREERYREAVDEYYAFKNEFPESKYMKDADRIFK 259
>gi|292491213|ref|YP_003526652.1| type IV pilus biogenesis/stability protein PilW [Nitrosococcus
halophilus Nc4]
gi|291579808|gb|ADE14265.1| type IV pilus biogenesis/stability protein PilW [Nitrosococcus
halophilus Nc4]
Length = 262
Score = 48.3 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 28/262 (10%), Positives = 68/262 (25%), Gaps = 12/262 (4%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDS----VTDVRYQREVYEKAVLFLKEQNFS 74
+ K T +I + L G S+ + V R R + V + K+
Sbjct: 1 MMKLVFTGVLAIILLGLGGCASTSTSSSQTQASSASVDGARAARINVQLGVEYFKQGELE 60
Query: 75 KAYEYFNQCSRDFPFAGVARKSLLMSAFV-----QYSAGKYQQAASLGEEYITQYPESKN 129
+A + + P A +L + + + Q
Sbjct: 61 QALKKLERAIGQDPNLPSAHNALALLKQRLGQVEEAEKHFQRAIKLDSSYSEAQNNYGVF 120
Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
+ + +L + + ++ + + +L
Sbjct: 121 LYSQGRYREAETHFLEAVKNPLYGTPELAYENAAMAAQKQSELDKAEDYYLKALQIEPRL 180
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
+ +G Y A Q A +++ ++ L D
Sbjct: 181 PKSLYRMAEINFNQGHYQQAHEYLQRYRAVARHTS---QSLWLGIKIERELGNEDAVSSY 237
Query: 250 VSLIQERYPQGYWARYVETLVK 271
L+++ +P A+ + ++
Sbjct: 238 ALLLRQNFPDSQEAQLLRESME 259
>gi|77164418|ref|YP_342943.1| tfp pilus assembly protein PilF [Nitrosococcus oceani ATCC 19707]
gi|76882732|gb|ABA57413.1| tfp pilus assembly protein PilF [Nitrosococcus oceani ATCC 19707]
Length = 246
Score = 48.3 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 26/245 (10%), Positives = 68/245 (27%), Gaps = 9/245 (3%)
Query: 32 VCFLVGWERQ-SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90
+ G SS++ + S+ + + + V + K+ +A + + + P
Sbjct: 2 LLGFAGCASILSSQEQDIPSIDKEKAAKINVQLGVEYFKQGELEQALKKLERAIQQDPKL 61
Query: 91 GVARKSLLMSAFVQYSAGKYQQAASLG-----EEYITQYPESKNVDYVYYLVGMSYAQMI 145
A +L + A + ++ E Q + + +
Sbjct: 62 PSAYNALALLKQRLGQAEEAEKYFQRAIKLDPEYSEAQNNYGVFLYNQGHYGDAEARFLE 121
Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
+L + ++ + +L + ++G
Sbjct: 122 AVKNPLYGTPELAYENAGMAAQKQVEFDKAERYYRKALQLEPRLPKSLYHMAEISFEKGH 181
Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
Y A Q A H +++ + L D L++ +P A+
Sbjct: 182 YQRAQEYLQRYRV---GARHTPKSLWLGIRIERELGNEDTVSSYALLLRRNFPDSPEAKL 238
Query: 266 VETLV 270
++ +
Sbjct: 239 LQKSL 243
>gi|325267811|ref|ZP_08134461.1| hypothetical protein HMPREF9098_2189 [Kingella denitrificans ATCC
33394]
gi|324980692|gb|EGC16354.1| hypothetical protein HMPREF9098_2189 [Kingella denitrificans ATCC
33394]
Length = 149
Score = 48.3 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 13/72 (18%), Positives = 26/72 (36%)
Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
K + I Q + A +A+ + E + D AR+ ++ RYP+
Sbjct: 69 QQKLNHCQSIIQIGQRFSRRFPQHPSAADALYAVGECQWKMQQQDIARDTWRQLRLRYPK 128
Query: 260 GYWARYVETLVK 271
A + ++
Sbjct: 129 TDAAARAQIRLQ 140
>gi|319789104|ref|YP_004150737.1| outer membrane assembly lipoprotein YfiO [Thermovibrio ammonificans
HB-1]
gi|317113606|gb|ADU96096.1| outer membrane assembly lipoprotein YfiO [Thermovibrio ammonificans
HB-1]
Length = 316
Score = 48.3 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 44/215 (20%), Positives = 85/215 (39%), Gaps = 9/215 (4%)
Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
R Y + + ++++ + + + + + A ++ G Y+ A
Sbjct: 21 PRTAEGQYREGIKAAAQEDWGRTIFLLKKALQGNLPPKEQEFAKIALADAYFNEGDYENA 80
Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
A EE++ YP S + +G+ Y +++ +D K R ++ Y N P
Sbjct: 81 ALNYEEFLQLYPASPRAKDALFRLGVCYLNLVKGPQWDVTFAKRAYNIFQRFIKEYPNDP 140
Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
VK A+ Y + R LA E+ IG Y ++ A+I R+ V + D E + + L
Sbjct: 141 RVKKAKLYAELARKILAEHEIYIGGTYDMLRKFTASIQRYTDVERKFKDVEAPDRLLYLL 200
Query: 234 VEAYVAL---------ALMDEAREVVSLIQERYPQ 259
AY L +E+R+ ++ + P
Sbjct: 201 GRAYYYTPLQAKEEIERLKEESRKDRERLKSKEPD 235
>gi|167762889|ref|ZP_02435016.1| hypothetical protein BACSTE_01253 [Bacteroides stercoris ATCC
43183]
gi|167699229|gb|EDS15808.1| hypothetical protein BACSTE_01253 [Bacteroides stercoris ATCC
43183]
Length = 267
Score = 48.3 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 40/226 (17%), Positives = 77/226 (34%), Gaps = 15/226 (6%)
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
YE A + + +S+A N+ A +SL M Y+ YQ AA +Y
Sbjct: 34 YEAAKNYFAKGQYSRAATLLNELIAILKGTDKAEESLYMLGMSYYNQKDYQTAAQTFTQY 93
Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
YP + + G + + DQ T +Q + +E + +S A+
Sbjct: 94 YNVYPRGTFTELARFHAGKALFLDTPEPRLDQSGTYSAIQQLQMFLEYFPDSSKKDEAQS 153
Query: 181 YVTVGRNQLAAKEV-----EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
+ +++L KE Y + + Q L +Y E+ ++
Sbjct: 154 MIFALQDKLVMKEYLSAKLYYNLGNYLGNNYESCVITAQNALKDYPYTNMREDLSILILR 213
Query: 236 AYVALA----------LMDEAREVVSLIQERYPQGYWARYVETLVK 271
A +A EA + + +P+ + + + + K
Sbjct: 214 AKYEMAVYSVEDKRAERYREAVDEYYAFKNEFPESKYMKDADRIFK 259
>gi|253701092|ref|YP_003022281.1| PEP-CTERM system TPR-repeat lipoprotein [Geobacter sp. M21]
gi|251775942|gb|ACT18523.1| PEP-CTERM system TPR-repeat lipoprotein [Geobacter sp. M21]
Length = 882
Score = 48.3 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 25/264 (9%), Positives = 66/264 (25%), Gaps = 27/264 (10%)
Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLD--------------------SVTDVRYQ 57
+ KF L + + G ++ +Y + D Y
Sbjct: 1 MMKKFCLVLVILLICF---GCSSKTKESLYNEGKQQMEASNPGAAVVFFKNALEKDGNYL 57
Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK-YQQAASL 116
++ A + +A + F + P L + + ++ A
Sbjct: 58 EARFQLAKAYAALGKNEQAEKEFTKVLTQNPTKDEVLLELAKLSNAAGKGDQGFRYATQY 117
Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIR-DVPYDQRATKLMLQYMSRIVERYTNSPYV 175
++ + Y + ++ + V+ T
Sbjct: 118 IAKHPGTVDGLEAAGISYLVRKKYQEARNYLTQALSVDPSRSATKLELASVDMATGDTES 177
Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
A + Q K + + + + + A+ +L
Sbjct: 178 AKALLNEVILAEQKNFKALYMLAAIENSSGHGDKAAALYQKILQLDQNQVN--ALYKLGL 235
Query: 236 AYVALALMDEAREVVSLIQERYPQ 259
Y+ +D+A + + + +P+
Sbjct: 236 LYLEKGEVDKADQSADQMIKAFPK 259
>gi|117923779|ref|YP_864396.1| hypothetical protein Mmc1_0465 [Magnetococcus sp. MC-1]
gi|117607535|gb|ABK42990.1| Tetratricopeptide TPR_2 repeat protein [Magnetococcus sp. MC-1]
Length = 377
Score = 48.3 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 11/95 (11%), Positives = 33/95 (34%)
Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
+ +G + + + +A+ F VL + ++ +++ ++ +
Sbjct: 273 DGFLKQYGSDPLADNAQYWLGEMHYVQRNFRSALVEFNNVLVKWPNSGKVPDSLLKIGFS 332
Query: 237 YVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+ L + AR + + + YP +K
Sbjct: 333 FYELEDYENARRALEQLVQNYPNANAVPLAMQRLK 367
Score = 39.8 bits (90), Expect = 0.43, Method: Composition-based stats.
Identities = 21/142 (14%), Positives = 51/142 (35%), Gaps = 8/142 (5%)
Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
+E Y++A L++ + +A E F+ + + +A + + Y ++
Sbjct: 244 PQATNAKEAYDQAKLYVTSGQYDRAQELFDGFLKQYGSDPLADNAQYWLGEMHYVQRNFR 303
Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
A + ++P S V +G S+ ++ + + + ++V+ Y N
Sbjct: 304 SALVEFNNVLVKWPNSGKVPDSLLKIGFSFYEL--------EDYENARRALEQLVQNYPN 355
Query: 172 SPYVKGARFYVTVGRNQLAAKE 193
+ V A + A
Sbjct: 356 ANAVPLAMQRLKRIEQVKANIH 377
>gi|237741500|ref|ZP_04571981.1| conserved hypothetical protein [Fusobacterium sp. 4_1_13]
gi|229429148|gb|EEO39360.1| conserved hypothetical protein [Fusobacterium sp. 4_1_13]
Length = 414
Score = 48.3 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 11/45 (24%), Positives = 20/45 (44%)
Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
E + +Y L E + + L+++ +P WA+ E L K
Sbjct: 370 PEIYYNIASSYAKLGNKVEVTKYLRLLKQEFPNSEWAKRSEALTK 414
>gi|289829585|ref|ZP_06547145.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
serovar Typhi str. E98-3139]
Length = 194
Score = 48.3 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 23/74 (31%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ AI FQ + Y D+ + A L + D+A +
Sbjct: 77 YNAAIALVQDKSRQDDAIVAFQNFIKKYPDSTYQPNANYWLGQLNYNKGKKDDAAYYFAS 136
Query: 253 IQERYPQGYWARYV 266
+ + YP+ A
Sbjct: 137 VVKNYPKSPKAADA 150
Score = 48.3 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 19/121 (15%), Positives = 41/121 (33%), Gaps = 14/121 (11%)
Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
D+ + +++Y +S Y A +++ K+ A
Sbjct: 85 QDKSRQDDAIVAFQNFIKKYPDSTYQPNANYWLGQLNYNKGKKD--------------DA 130
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
F V+ NY + A +AM ++ +A+ V + +YP A+ +
Sbjct: 131 AYYFASVVKNYPKSPKAADAMYKVGVIMQDKGDTAKAKAVYQQVINKYPGTDGAKQAQKR 190
Query: 270 V 270
+
Sbjct: 191 L 191
>gi|34763427|ref|ZP_00144375.1| hypothetical protein [Fusobacterium nucleatum subsp. vincentii ATCC
49256]
gi|27886896|gb|EAA24020.1| hypothetical protein [Fusobacterium nucleatum subsp. vincentii ATCC
49256]
Length = 407
Score = 48.3 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 11/45 (24%), Positives = 20/45 (44%)
Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
E + +Y L E + + L+++ +P WA+ E L K
Sbjct: 363 PEIYYNIASSYAKLGNKVEVTKYLRLLKQEFPNSEWAKRSEALTK 407
>gi|289803195|ref|ZP_06533824.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
serovar Typhi str. AG3]
Length = 176
Score = 48.3 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 23/74 (31%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ AI FQ + Y D+ + A L + D+A +
Sbjct: 59 YNAAIALVQDKSRQDDAIVAFQNFIKKYPDSTYQPNANYWLGQLNYNKGKKDDAAYYFAS 118
Query: 253 IQERYPQGYWARYV 266
+ + YP+ A
Sbjct: 119 VVKNYPKSPKAADA 132
Score = 47.1 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 18/121 (14%), Positives = 41/121 (33%), Gaps = 14/121 (11%)
Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
D+ + +++Y +S Y A +++ K+ A
Sbjct: 67 QDKSRQDDAIVAFQNFIKKYPDSTYQPNANYWLGQLNYNKGKKD--------------DA 112
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
F V+ NY + A +AM ++ D++ + ++YP A+ +
Sbjct: 113 AYYFASVVKNYPKSPKAADAMYKVGVIMQDKGDTDKSESGYQQVIKKYPGTDGAKQAQKR 172
Query: 270 V 270
+
Sbjct: 173 L 173
>gi|223038565|ref|ZP_03608858.1| TPR repeat-containing protein [Campylobacter rectus RM3267]
gi|222879967|gb|EEF15055.1| TPR repeat-containing protein [Campylobacter rectus RM3267]
Length = 297
Score = 48.3 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 22/198 (11%), Positives = 57/198 (28%), Gaps = 6/198 (3%)
Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
+ NF+ A F++ + + +++ S T+ +
Sbjct: 102 NDGNFT-AKSDFDELKKYVEESRKIQEANNAKITKALKDMGALIDKSNAAPANTKKTDED 160
Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
++ +Q + + Y Y+ ++
Sbjct: 161 KSAVKTPDTQSQSSKTDFTRRKNQDVASEAKKLFDAGKLDDAKARY-----EYLLSKDHK 215
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
A +G K+ Y AI +Q + Y A++ + + ++ + + A +
Sbjct: 216 PAMANFYLGEIAYKQKAYNNAIKHYQQSIQLYDKADYTPKLLYHTAISFDKIKDTESANK 275
Query: 249 VVSLIQERYPQGYWARYV 266
++ YP A+
Sbjct: 276 FYKALKLGYPDSKEAKQA 293
>gi|303328462|ref|ZP_07358899.1| TPR domain protein [Desulfovibrio sp. 3_1_syn3]
gi|302861456|gb|EFL84393.1| TPR domain protein [Desulfovibrio sp. 3_1_syn3]
Length = 328
Score = 48.3 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 15/150 (10%), Positives = 46/150 (30%), Gaps = 14/150 (9%)
Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
P + V ++ R + + + ++ Y + A++
Sbjct: 190 WGQPSPQPVVQAPQKDISLALFDAGVNAFNARKYEEAQRSFTDFLKNYKDHNLAPEAQY- 248
Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
+ Y +R ++ A + V+ Y + A + ++ +
Sbjct: 249 -------------YLAECYFQRNQFADAALAYDTVIKKYPKSTRTPGAYLKQGISFSKIN 295
Query: 242 LMDEAREVVSLIQERYPQGYWARYVETLVK 271
A+ + + +++P A ++ +K
Sbjct: 296 QGAAAKARMQELIKKFPNSPEAARAKSFLK 325
>gi|303235927|ref|ZP_07322530.1| tetratricopeptide repeat protein [Prevotella disiens FB035-09AN]
gi|302483800|gb|EFL46792.1| tetratricopeptide repeat protein [Prevotella disiens FB035-09AN]
Length = 1176
Score = 48.3 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 24/211 (11%), Positives = 53/211 (25%), Gaps = 12/211 (5%)
Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
A + E A + + P + F A + +A
Sbjct: 459 DAEKRMAENQGMGANADNSNMATPMPRSQQQENGTWY--FYNQMAVQQGKAQFQKLWGKR 516
Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
+ ++ + GM+ D D A + + + +
Sbjct: 517 ENVDNWQRVNKTVVGGMNNNMEWTDEQRDSIAKEEARLDSIESKTDSVQNDPHRREFYLA 576
Query: 183 TVGRNQLAAK----------EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232
+ + + + + A + V NY D E ++
Sbjct: 577 QIPFTEEQMQASNKILETGLHHAGVIFKDRLDNLRLAEKNLRRVSDNYPDYEEMDDVYYH 636
Query: 233 LVEAYVALALMDEAREVVSLIQERYPQGYWA 263
L Y+ A ++ ++ YP+ W
Sbjct: 637 LYLLYMRKNQPQLADSYINKLKANYPKSQWT 667
>gi|302342342|ref|YP_003806871.1| hypothetical protein Deba_0907 [Desulfarculus baarsii DSM 2075]
gi|301638955|gb|ADK84277.1| Tetratricopeptide TPR_2 repeat protein [Desulfarculus baarsii DSM
2075]
Length = 1085
Score = 48.3 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 21/211 (9%), Positives = 49/211 (23%), Gaps = 53/211 (25%)
Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
+ + L+E+++++A F + FP +++ A Y + + AA
Sbjct: 448 ADALLSRGRSALEERDYNQALLAFQELMDRFPKDQAVGEAMFRFADAFYYENERKMAAKF 507
Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
+ VP+
Sbjct: 508 HDVMFNYQRAIDLHP------------QSDQVPWALLMMGKASMAFGE------------ 543
Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
+ F++V+ +Y + + A+ A
Sbjct: 544 -----------------------------PFRGMGYFEIVINDYPKSPYVPLALVNRGGA 574
Query: 237 YVALALMDEAREVVSLIQERYPQGYWARYVE 267
+ A + YPQ + +
Sbjct: 575 FQEQGKFAMAVAEYERVLASYPQSDYRVDAQ 605
Score = 39.8 bits (90), Expect = 0.38, Method: Composition-based stats.
Identities = 29/192 (15%), Positives = 61/192 (31%), Gaps = 18/192 (9%)
Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
+ +Y + ++++KA YF P L G+ + A
Sbjct: 638 QNPELLYYLGEAEFQLRDYNKARFYFLWALNIRPDMRDGDIILTRVGDSYGYQGQDRAAR 697
Query: 115 SLGEEYITQYPESKN--VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
+ + I YP++ V + + +A + I ++Y +
Sbjct: 698 EIYAQVIDMYPDTDGALVARIRLAESPEKDIEHPWDIFQVKADLDAYRTYKEIADKYAD- 756
Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232
R +V++ Y+ K+ E+V AI + L + E
Sbjct: 757 -------------RQVGQLAKVKLAVYHYKKNEFVKAIDTLEKFLQLNPNTPFRPEVDYT 803
Query: 233 LVEAYVALALMD 244
+ A A+ L++
Sbjct: 804 MNLA--AIGLLE 813
Score = 38.2 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 23/246 (9%), Positives = 65/246 (26%), Gaps = 26/246 (10%)
Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
V D + + F ++ F+ A + + +P + + A
Sbjct: 552 EIVINDYPKSPYVPLALVNRGGAFQEQGKFAMAVAEYERVLASYPQSDYRVDAQWGLAKA 611
Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY-- 161
+ +++ A+ + E + P+ + +RD + L
Sbjct: 612 YFGMARFRAASDVLLEMAKENPQMHLQNPELLYYLGEAEFQLRDYNKARFYFLWALNIRP 671
Query: 162 ------------------------MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
I + + + + K++E
Sbjct: 672 DMRDGDIILTRVGDSYGYQGQDRAAREIYAQVIDMYPDTDGALVARIRLAESPEKDIEHP 731
Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
+ + A ++ + Y+D + + A +L + +A + + +
Sbjct: 732 WDIFQVKADLDAYRTYKEIADKYADRQVGQLAKVKLAVYHYKKNEFVKAIDTLEKFLQLN 791
Query: 258 PQGYWA 263
P +
Sbjct: 792 PNTPFR 797
>gi|254000098|ref|YP_003052161.1| tol-pal system protein YbgF [Methylovorus sp. SIP3-4]
gi|253986777|gb|ACT51634.1| tol-pal system protein YbgF [Methylovorus sp. SIP3-4]
Length = 270
Score = 48.3 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 36/93 (38%)
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
A +G Y AAI Q +L Y D+ A EA + + +
Sbjct: 171 FLQAYPASTHAADAMYGLGFSQFSLKNYKAAIATQQKLLKQYPDSAKAPEASFNIANSQI 230
Query: 239 ALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
LA +D A++ + + +YP+ ++ +K
Sbjct: 231 QLADIDGAKKTLRDLISQYPKSDVIPRAQSRLK 263
Score = 40.5 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 14/69 (20%), Positives = 29/69 (42%)
Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
K+++ L+ ++ + +Q L Y + HA +AM L + +L A
Sbjct: 147 KDLDAANALLQASKFKESFDAYQKFLQAYPASTHAADAMYGLGFSQFSLKNYKAAIATQQ 206
Query: 252 LIQERYPQG 260
+ ++YP
Sbjct: 207 KLLKQYPDS 215
>gi|313202057|ref|YP_004040715.1| tol-pal system protein ybgf [Methylovorus sp. MP688]
gi|312441373|gb|ADQ85479.1| tol-pal system protein YbgF [Methylovorus sp. MP688]
Length = 270
Score = 48.3 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 37/93 (39%)
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
A +G Y AAI Q +L Y D+ A EA + + +
Sbjct: 171 FLQAYPASTHAADAMYGLGFSQFSLKNYKAAIATQQKLLKQYPDSAKAPEASFNIANSQI 230
Query: 239 ALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
LA +D A++ + + +YP+ + ++ +K
Sbjct: 231 QLADIDGAKKTLRDLISQYPKSDVIPHAQSRLK 263
Score = 41.3 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 14/69 (20%), Positives = 29/69 (42%)
Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
K+++ L+ ++ + +Q L Y + HA +AM L + +L A
Sbjct: 147 KDLDAANALLQASKFKESFDAYQKFLQAYPASTHAADAMYGLGFSQFSLKNYKAAIATQQ 206
Query: 252 LIQERYPQG 260
+ ++YP
Sbjct: 207 KLLKQYPDS 215
>gi|329904213|ref|ZP_08273696.1| TPR repeat containing exported protein [Oxalobacteraceae bacterium
IMCC9480]
gi|327548109|gb|EGF32830.1| TPR repeat containing exported protein [Oxalobacteraceae bacterium
IMCC9480]
Length = 256
Score = 48.3 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 20/122 (16%), Positives = 43/122 (35%), Gaps = 2/122 (1%)
Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
P +Q+ + L + + + + R Y G A + Y +
Sbjct: 130 PAEQKTYEAALALFKAGDYKTSGAAFTDFMRRYPQSGFAPSAQYFLGTTYYAQRDYRNAI 189
Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
Q+V+ NY + A +A+ + Y L A++ + + +YP A+ +
Sbjct: 190 TAQ--QVVVKNYPENPKAADALLNIASCYAELKDRPAAKKSLETLVAQYPSSPAAQTAKE 247
Query: 269 LV 270
+
Sbjct: 248 RL 249
Score = 47.1 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 18/112 (16%), Positives = 31/112 (27%), Gaps = 2/112 (1%)
Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
+ + R K K E K G+Y + F +
Sbjct: 101 KDFYVDLDTRLRKLEPQKMTVDGKETSVEPAEQKTYEAALALFKAGDYKTSGAAFTDFMR 160
Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
Y + A A L Y A A ++ + YP+ + + L+
Sbjct: 161 RYPQSGFAPSAQYFLGTTYYAQRDYRNAITAQQVVVKNYPENP--KAADALL 210
Score = 36.3 bits (81), Expect = 4.9, Method: Composition-based stats.
Identities = 16/93 (17%), Positives = 34/93 (36%)
Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
+ +++ YE A+ K ++ + F R +P +G A + Y+
Sbjct: 124 KETSVEPAEQKTYEAALALFKAGDYKTSGAAFTDFMRRYPQSGFAPSAQYFLGTTYYAQR 183
Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
Y+ A + + + YPE+ + Y
Sbjct: 184 DYRNAITAQQVVVKNYPENPKAADALLNIASCY 216
>gi|218893055|ref|YP_002441924.1| hypothetical protein PLES_43401 [Pseudomonas aeruginosa LESB58]
gi|218773283|emb|CAW29095.1| conserved hypothetical protein [Pseudomonas aeruginosa LESB58]
Length = 274
Score = 48.3 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 21/119 (17%), Positives = 48/119 (40%), Gaps = 14/119 (11%)
Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
+ Q + + +Y NS Y A++++ G L +G+ A
Sbjct: 167 KDFDKASQAFNAFLRKYPNSQYSGNAQYWL--------------GEVNLAKGDLQGAGQA 212
Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
F V +Y ++ +++ +L + L D+A+ ++ + +YP A+ + +K
Sbjct: 213 FARVSQSYPSSQKVPDSLYKLADVERRLGNNDKAKGILQQVISQYPGTSAAQLAQRDLK 271
Score = 41.3 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 12/69 (17%), Positives = 27/69 (39%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ +K ++ A F L Y +++++ A L E +A + A + +
Sbjct: 156 YYDAAFDLIKSKDFDKASQAFNAFLRKYPNSQYSGNAQYWLGEVNLAKGDLQGAGQAFAR 215
Query: 253 IQERYPQGY 261
+ + YP
Sbjct: 216 VSQSYPSSQ 224
Score = 38.6 bits (87), Expect = 0.89, Method: Composition-based stats.
Identities = 22/123 (17%), Positives = 41/123 (33%), Gaps = 8/123 (6%)
Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
D ++ Y+ A +K ++F KA + FN R +P + + + V + G
Sbjct: 145 SEPGDPAKEKLYYDAAFDLIKSKDFDKASQAFNAFLRKYPNSQYSGNAQYWLGEVNLAKG 204
Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
Q A YP S+ V + DV + +++ +
Sbjct: 205 DLQGAGQAFARVSQSYPSSQKVPDS--------LYKLADVERRLGNNDKAKGILQQVISQ 256
Query: 169 YTN 171
Y
Sbjct: 257 YPG 259
>gi|15596171|ref|NP_249665.1| hypothetical protein PA0974 [Pseudomonas aeruginosa PAO1]
gi|254239322|ref|ZP_04932645.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
gi|254245257|ref|ZP_04938579.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|5815421|gb|AAD52665.1|AF177774_2 periplasmic protein [Pseudomonas aeruginosa]
gi|9946881|gb|AAG04363.1|AE004530_16 conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
gi|126171253|gb|EAZ56764.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
gi|126198635|gb|EAZ62698.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
Length = 274
Score = 48.3 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 21/119 (17%), Positives = 48/119 (40%), Gaps = 14/119 (11%)
Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
+ Q + + +Y NS Y A++++ G L +G+ A
Sbjct: 167 KDFDKASQAFNAFLRKYPNSQYSGNAQYWL--------------GEVNLAKGDLQGAGQA 212
Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
F V +Y ++ +++ +L + L D+A+ ++ + +YP A+ + +K
Sbjct: 213 FARVSQSYPSSQKVPDSLYKLADVERRLGNNDKAKGILQQVISQYPGTSAAQLAQRDLK 271
Score = 41.3 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 12/69 (17%), Positives = 27/69 (39%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ +K ++ A F L Y +++++ A L E +A + A + +
Sbjct: 156 YYDAAFDLIKSKDFDKASQAFNAFLRKYPNSQYSGNAQYWLGEVNLAKGDLQGAGQAFAR 215
Query: 253 IQERYPQGY 261
+ + YP
Sbjct: 216 VSQSYPSSQ 224
Score = 38.6 bits (87), Expect = 0.89, Method: Composition-based stats.
Identities = 22/123 (17%), Positives = 41/123 (33%), Gaps = 8/123 (6%)
Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
D ++ Y+ A +K ++F KA + FN R +P + + + V + G
Sbjct: 145 SEPGDPAKEKLYYDAAFDLIKSKDFDKASQAFNAFLRKYPNSQYSGNAQYWLGEVNLAKG 204
Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
Q A YP S+ V + DV + +++ +
Sbjct: 205 DLQGAGQAFARVSQSYPSSQKVPDS--------LYKLADVERRLGNNDKAKGILQQVISQ 256
Query: 169 YTN 171
Y
Sbjct: 257 YPG 259
>gi|218264397|ref|ZP_03478254.1| hypothetical protein PRABACTJOHN_03950 [Parabacteroides johnsonii
DSM 18315]
gi|218222035|gb|EEC94685.1| hypothetical protein PRABACTJOHN_03950 [Parabacteroides johnsonii
DSM 18315]
Length = 999
Score = 48.3 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 36/220 (16%), Positives = 61/220 (27%), Gaps = 22/220 (10%)
Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
Y Y + K +++S A F Q A + + Q
Sbjct: 500 NTDMYALAYYNLGYSYFKLRDYSAALNRFRQYVDLESNQQAASLADAYNRIGDCLYQNRQ 559
Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
+ + DY Y G + M R++ Y
Sbjct: 560 FSLAEENYSRAAQLSPSAGDYSIYQKGFLLGLQKDYRGK--------ISAMDRLISEYPE 611
Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231
S YV A F E GR Y+ +A F+ ++ + + A +A
Sbjct: 612 SQYVDDALF--------------EKGRSYVLLENSSSAAQAFEKLIREFPQSSLARKAGI 657
Query: 232 RLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+L Y ++A + YP A+ +K
Sbjct: 658 QLGLLYYNDNQPEKALTAYKQVISNYPGSEEAKIALQDLK 697
Score = 47.9 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 25/245 (10%), Positives = 71/245 (28%), Gaps = 18/245 (7%)
Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99
+ ++ + + Q +++ + A F++ + + AR
Sbjct: 411 KSINKIKHPSTKILEAKQDILFQLGTQAFANVKLNDAVSLFSRAIQLGSYNMEARNDAYF 470
Query: 100 S---AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
++ + + + T+ + YY +G SY ++ R +
Sbjct: 471 WRGESYYRMGEYENAISDYRTYLNNTRQRNTDMYALAYYNLGYSYFKLRDYSAALNRFRQ 530
Query: 157 --------------LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
+ + + + + + L
Sbjct: 531 YVDLESNQQAASLADAYNRIGDCLYQNRQFSLAEENYSRAAQLSPSAGDYSIYQKGFLLG 590
Query: 203 -RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
+ +Y I +++ Y ++++ ++A+ +YV L A + + +PQ
Sbjct: 591 LQKDYRGKISAMDRLISEYPESQYVDDALFEKGRSYVLLENSSSAAQAFEKLIREFPQSS 650
Query: 262 WARYV 266
AR
Sbjct: 651 LARKA 655
Score = 39.8 bits (90), Expect = 0.45, Method: Composition-based stats.
Identities = 25/234 (10%), Positives = 72/234 (30%), Gaps = 15/234 (6%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
+ ++ Y A ++ + + K + + +P + + + Y G
Sbjct: 200 KESPKYREQSQYYIAQIYFIQSKYEKVVKEGEELLSLYPGSKNNSEMFRIVGDSYYHLGD 259
Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
+A + +Y++ D V T +++ Y
Sbjct: 260 QGKAIQMLSKYVSSTENPLRSDLYILGVCYFNKGNYSSAVNALSRTVRQNDELTQNAYLY 319
Query: 170 TNSPYVKGARFYV-------------TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
Y+K ++A + + + ++ F+
Sbjct: 320 LGQSYLKLGDKNNARMAFEAAATSSFDKQIKEVAMYNYALLIHETAFTGFGESVTIFEDF 379
Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
L ++ ++++A++ LVE Y+ + A + ++ I+ P + ++
Sbjct: 380 LNDFPNSQYADKVNDYLVEVYLTTKNYEAALKSINKIKH--PSTKILEAKQDIL 431
Score = 35.9 bits (80), Expect = 5.3, Method: Composition-based stats.
Identities = 15/219 (6%), Positives = 50/219 (22%), Gaps = 11/219 (5%)
Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
++ + +N++ + + A + +++ M + Y G+
Sbjct: 24 QFDAPDRLFVEGKELFSLKNYAGCIDKLEAYKQHSTDADLIQEADYMLVYAAYEQGRPNA 83
Query: 113 AASLGEEYITQYPESKNVDYVYY----------LVGMSYAQMIRDVPYDQRATKLMLQYM 162
L + + + Y + D+ +
Sbjct: 84 DELLKDYLEEYPASRHSDEIGYMIGSVHFERGEYEKAIFWFNEADIDMLSPEQQEAYS-F 142
Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
K ++ + + KE
Sbjct: 143 RLAYSLLQTGEMEKARGYFARIEQIGDKYKEASTYYVAYIDYAMGNYNNALIEFSRLKES 202
Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
++ E++ + + Y + ++ + + YP
Sbjct: 203 PKYREQSQYYIAQIYFIQSKYEKVVKEGEELLSLYPGSK 241
>gi|320106747|ref|YP_004182337.1| Lytic transglycosylase [Terriglobus saanensis SP1PR4]
gi|319925268|gb|ADV82343.1| Lytic transglycosylase catalytic [Terriglobus saanensis SP1PR4]
Length = 793
Score = 47.9 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 25/206 (12%), Positives = 49/206 (23%), Gaps = 9/206 (4%)
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
Y K +A F + P A ++ A L
Sbjct: 252 YAKGRALQVSGQNQQAIAVFREIYLRQPLTTEAGQA---------RTQLSALGAQLTAAE 302
Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
+ + Y Y + D A K L+ + + + +
Sbjct: 303 RKIHADQLFNAKRYTEASAEYHALEHDDASLSLADKDALEIYAAVCDLKLKHLSRRDVER 362
Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
+ A K + A Q ++ + + EEA+ ++
Sbjct: 363 LPDTNDDSAALKLYLTAEISRNEKDIQAQRNAMQAMIERFPHSRWTEEALYSGGNMHLLQ 422
Query: 241 ALMDEAREVVSLIQERYPQGYWARYV 266
A S + +P +A
Sbjct: 423 HDASNAIWHYSQLYTNFPNSVYAPSA 448
Score = 36.3 bits (81), Expect = 4.8, Method: Composition-based stats.
Identities = 17/91 (18%), Positives = 28/91 (30%)
Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
A G +L + + AI + + N+ ++ +A A R
Sbjct: 395 MQAMIERFPHSRWTEEALYSGGNMHLLQHDASNAIWHYSQLYTNFPNSVYAPSAHWRTAW 454
Query: 236 AYVALALMDEAREVVSLIQERYPQGYWARYV 266
L EA ++ RYPQ A
Sbjct: 455 MNYRLRRYPEAARLMEEQIARYPQSTEASAA 485
>gi|29348225|ref|NP_811728.1| TPR domain-containing protein [Bacteroides thetaiotaomicron
VPI-5482]
gi|29340128|gb|AAO77922.1| TPR domain-containing protein [Bacteroides thetaiotaomicron
VPI-5482]
Length = 1003
Score = 47.9 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 34/222 (15%), Positives = 69/222 (31%), Gaps = 22/222 (9%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
+ Y Y + +++++A YF + + + + +
Sbjct: 502 QPNNEMYALANYNLGYIAFHRKDYTQASNYFQKYIQLEKG--------ENRTALADAYNR 553
Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
+ + + G + V Q+ + ++R+V +Y
Sbjct: 554 IGDCHLNVRNFEEAKHYYSQAEQMNTPSGDYSFYQLALVSGLQKDYTGKITLLNRLVGKY 613
Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
+SPY E GR Y+ AI F+ +L Y ++ + +A
Sbjct: 614 PSSPY--------------AVNAIYEKGRSYVLMDNNSQAITSFKELLEKYPESPVSRKA 659
Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
A + Y D+A + E+YP AR +K
Sbjct: 660 AAEIGLLYYQNGNFDQAINAYKQVIEKYPGSEEARLAMRDMK 701
Score = 45.9 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 31/261 (11%), Positives = 68/261 (26%), Gaps = 17/261 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K I ++ C + Q+S + +Y++ +E+N++ A
Sbjct: 1 MKKRISRIICTLLCCAPIAISAQTSEKIT--------SPVNLYKEGKELFQEKNYAAAIP 52
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY-----V 133
+ P A + + + M Y + L +
Sbjct: 53 ALKAFVKQKPTASLLQDAEYMLVSSAYELKDKNRIELLRKYLDCYPDTPYANRIYSLLAS 112
Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
Y Y + + + + R + T + A+
Sbjct: 113 CYFYEGKYDEALALFNSTRLDLLGNEERDDRTYQLATCYMKTDNLKEAAIWFETLRASSP 172
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANY----SDAEHAEEAMARLVEAYVALALMDEAREV 249
R+ L ++ D ++ E + E Y D+A+ V
Sbjct: 173 KYAKDCSYYLAYIRYTQKRYDEALKDFLPLQDDPKYKELVPYYIAEIYAIKKNYDKAQIV 232
Query: 250 VSLIQERYPQGYWARYVETLV 270
YP A + ++
Sbjct: 233 AQNYLSAYPNNEHAAEMYRIL 253
Score = 35.5 bits (79), Expect = 8.1, Method: Composition-based stats.
Identities = 29/224 (12%), Positives = 70/224 (31%), Gaps = 16/224 (7%)
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
Y A ++ ++N+ KA +P A + + Y G+Y QA Y
Sbjct: 214 YYIAEIYAIKKNYDKAQIVAQNYLSAYPNNEHAAEMYRILGDAYYHFGQYHQAVEAFTGY 273
Query: 121 ITQYPESKNVDYVYY----LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
+ + + D +Y ++ L + + + +
Sbjct: 274 LDRDHSAPRRDALYMLGLSYYQTKVYSKAAEMLGQVTTANDALTQNAYLHMGLSYLQLAE 333
Query: 177 GARFYVTVGR----------NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
+ + + + AA + + + ++ F+ L + + +A
Sbjct: 334 KNKARMAFEQAAASNANLQIKEQAAYNYALCLHETSYSAFGESVTAFEKFLNEFPTSPYA 393
Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
E+ LVE Y+ + A + + I + P + ++
Sbjct: 394 EKVSNYLVEVYINTRSYEAALKSIERIAK--PSAQIMEAKQKIL 435
>gi|218131427|ref|ZP_03460231.1| hypothetical protein BACEGG_03045 [Bacteroides eggerthii DSM 20697]
gi|217986359|gb|EEC52696.1| hypothetical protein BACEGG_03045 [Bacteroides eggerthii DSM 20697]
Length = 1010
Score = 47.9 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 31/222 (13%), Positives = 63/222 (28%), Gaps = 22/222 (9%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
Y Y A + +++++ A + F + + + +
Sbjct: 510 QKNTEMYALAYYNLAYITFHKKDYATAQDRFQKFIQLQKSGDATVLADAYNRIGDCHMQA 569
Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
+ + + + DY YY + + +L +Y +
Sbjct: 570 RRFDEAKQYYTRAENLGTPAGDYSYYQLALVAGLQKNYDGKVALLNQLANKYPN------ 623
Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
E GR Y++ AI F+ +L Y ++ + +A
Sbjct: 624 ----------------SPYAINALYEKGRSYVQSRNNSQAIATFRELLNKYPESPVSRKA 667
Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
A + Y D A E + +YP AR +K
Sbjct: 668 AAEIGLLYYQNDDYDRAIEAYKHVITKYPGSEEARLAMRDLK 709
Score = 44.4 bits (102), Expect = 0.017, Method: Composition-based stats.
Identities = 25/210 (11%), Positives = 51/210 (24%), Gaps = 20/210 (9%)
Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
+Y + + + +A FN +L + K A +
Sbjct: 478 ANALYWRGESYYRLNRMQEAARNFNDYLSLTTQKNTEMYALAYYNLAYITFHKKDYATAQ 537
Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
+ V I D R QY +R
Sbjct: 538 DRFQKFIQLQKSGDATV----LADAYNRIGDCHMQARRFDEAKQYYTR------------ 581
Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
+G ++ + Y + + Y ++ +A A+ +
Sbjct: 582 ----AENLGTPAGDYSYYQLALVAGLQKNYDGKVALLNQLANKYPNSPYAINALYEKGRS 637
Query: 237 YVALALMDEAREVVSLIQERYPQGYWARYV 266
YV +A + +YP+ +R
Sbjct: 638 YVQSRNNSQAIATFRELLNKYPESPVSRKA 667
Score = 37.1 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 33/213 (15%), Positives = 68/213 (31%), Gaps = 15/213 (7%)
Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
+YEK +++ +N S+A F + +P + V+RK+ + Y Y +A +
Sbjct: 630 ALYEKGRSYVQSRNNSQAIATFRELLNKYPESPVSRKAAAEIGLLYYQNDDYDRAIEAYK 689
Query: 119 EYITQYPESKNVDYVYYLVGMSY---------------AQMIRDVPYDQRATKLMLQYMS 163
IT+YP S+ + Y ++ + +
Sbjct: 690 HVITKYPGSEEARLAMRDLKSIYVEANRVDEFAALAAQMPGAIRFEPSEQDSLTYIAAEK 749
Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
++ R+ + + K + A+ L Y D+
Sbjct: 750 VYMKGELTPAKASFTRYLQSYPNGAFSLNAHYYLSIIGKEQKDEVAVLEHAGKLLEYPDS 809
Query: 224 EHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
++EEA+ E ++A +Q R
Sbjct: 810 PYSEEALLMRGEILFNHKEYEQAMADYKQLQAR 842
>gi|973202|gb|AAC13872.1| unknown [Dichelobacter nodosus]
Length = 106
Score = 47.9 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 40/82 (48%)
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
++EI +YL++G++VAA R + +L +Y A A+A ++ AY L A +
Sbjct: 4 GKHDLEIADFYLRKGDFVAAAARAKNILEHYETTPSAPYALAIMIRAYRELGQKLLADDA 63
Query: 250 VSLIQERYPQGYWARYVETLVK 271
+ + Y + ++ ++
Sbjct: 64 MRVFNMNYVDSLESPEIKRYLQ 85
>gi|282163495|ref|YP_003355880.1| hypothetical protein MCP_0825 [Methanocella paludicola SANAE]
gi|282155809|dbj|BAI60897.1| conserved hypothetical protein [Methanocella paludicola SANAE]
Length = 192
Score = 47.9 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 27/78 (34%), Gaps = 1/78 (1%)
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA-YVALALMDEARE 248
A GR K ++ A F V + D+E A EA+ A Y + +
Sbjct: 110 AEMLFAEGRAAFKNKDWDRAERCFNSVAERFPDSEEAPEALYYTGVARYEKTHDATDLAD 169
Query: 249 VVSLIQERYPQGYWARYV 266
+ +YP W +
Sbjct: 170 TSKKLNAKYPNSSWTKKA 187
>gi|325981316|ref|YP_004293718.1| tol-pal system protein YbgF [Nitrosomonas sp. AL212]
gi|325530835|gb|ADZ25556.1| tol-pal system protein YbgF [Nitrosomonas sp. AL212]
Length = 300
Score = 47.9 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 32/249 (12%), Positives = 65/249 (26%), Gaps = 9/249 (3%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY-EY 79
F + + V + + + +R Q + E + + + S+A +
Sbjct: 1 MLIRAFFLLLLLSCNVSYASLFGDSEAREQIDVLRKQVKEMEARIAKMDQALNSEALLQL 60
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
+ Q G + M + K Q+ + + + E
Sbjct: 61 YTQVETLGLELGKLNGQIEMLSNDNALLQKRQRDFYIDLDNRLRQIEQPGSPTPLPHSTP 120
Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA--------A 191
P + I ++ + + +
Sbjct: 121 QSTPRGMTAPSPDEHAAAAPPINNDITPESSSVESANSSSTMDSGSLSVNELAPPGPAEN 180
Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
+ K GEY I +F+ L NY + A A + A AL A +
Sbjct: 181 AAYKEAYDSFKNGEYANTIAQFENFLENYPQSTLAPGAAYWIGNARYALRDYQLAIDAQK 240
Query: 252 LIQERYPQG 260
+ +YP
Sbjct: 241 KLISKYPDS 249
Score = 42.9 bits (98), Expect = 0.051, Method: Composition-based stats.
Identities = 14/116 (12%), Positives = 33/116 (28%), Gaps = 2/116 (1%)
Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
K Y N+ IG +Y AI +
Sbjct: 183 YKEAYDSFKN--GEYANTIAQFENFLENYPQSTLAPGAAYWIGNARYALRDYQLAIDAQK 240
Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
+++ Y D+ +A+ + + + + R+ + + +P A + +
Sbjct: 241 KLISKYPDSNKVPDALLNIATSQFEMGDRNAGRKTLENLLLSHPHSEAAGKAKQRL 296
>gi|167763754|ref|ZP_02435881.1| hypothetical protein BACSTE_02134 [Bacteroides stercoris ATCC
43183]
gi|167697870|gb|EDS14449.1| hypothetical protein BACSTE_02134 [Bacteroides stercoris ATCC
43183]
Length = 1010
Score = 47.9 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 29/226 (12%), Positives = 63/226 (27%), Gaps = 22/226 (9%)
Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
Y Y A + +++++ A + F + + + +
Sbjct: 506 SLTPQKNTEMYALAYYNLAYIAFHKKDYATAQDRFLKFIQLRKAGDATVLADAYNRVGDC 565
Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
+ + + + DY YY + + +L +Y +
Sbjct: 566 YMQVRRFDEAKQYYTRAENLGTPAGDYSYYQLALVSGLQKDYDGKITLLNRLADKYPN-- 623
Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
+ E GR Y++ AI F+ +L Y ++
Sbjct: 624 --------------------SPYAVSALYEKGRSYVQGRNNSQAIATFRELLNKYPESPV 663
Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+ +A + Y + A E + +YP AR +K
Sbjct: 664 SRKAATEIGLLYYQNDDYNRAIEAYKYVITQYPGSEEARLAMRDLK 709
Score = 44.4 bits (102), Expect = 0.018, Method: Composition-based stats.
Identities = 26/210 (12%), Positives = 52/210 (24%), Gaps = 20/210 (9%)
Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
+Y + + + +A FN P +L + K A +
Sbjct: 478 ADALYWRGESYYRLNRMQEAARNFNDYLSLTPQKNTEMYALAYYNLAYIAFHKKDYATAQ 537
Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
V + D R QY +R
Sbjct: 538 DRFLKFIQLRKAGDATV----LADAYNRVGDCYMQVRRFDEAKQYYTR------------ 581
Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
+G ++ + +Y I + Y ++ +A A+ +
Sbjct: 582 ----AENLGTPAGDYSYYQLALVSGLQKDYDGKITLLNRLADKYPNSPYAVSALYEKGRS 637
Query: 237 YVALALMDEAREVVSLIQERYPQGYWARYV 266
YV +A + +YP+ +R
Sbjct: 638 YVQGRNNSQAIATFRELLNKYPESPVSRKA 667
Score = 36.7 bits (82), Expect = 3.1, Method: Composition-based stats.
Identities = 26/268 (9%), Positives = 61/268 (22%), Gaps = 25/268 (9%)
Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
+K + ++ L+ + + + +YE+ +++ F+ A
Sbjct: 1 MKHKIYRIVCTALCCAPLLATAQTGGKIT---------SPQRLYEEGESLFRQKAFAAAM 51
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
+ G + +Y + +
Sbjct: 52 PPLQAFIKQTDAEGAPVSAAGNKEEAEYMLVCAEYELRNPNSIELLREYLDAYPDTPHAN 111
Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
+ + L + SR+ R + +
Sbjct: 112 RICALIASAYFFEGKYDDALAMFNSSRLDLLSNEERDDMTYRLATCYLKTGNVKEAAIWF 171
Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAE--------------EAM--ARLVEAYVALA 241
G A + L YS + + EA+ + E Y+
Sbjct: 172 ETLRSTGSRYTADCTYYLAYIRYSQQRYDDALNGFLSLQDNAKYEALVPYYIAEIYLIKK 231
Query: 242 LMDEAREVVSLIQERYPQGYWARYVETL 269
D+A V YP + + +
Sbjct: 232 NYDKAEIVAQNYLSAYPNQKYTGEMYRI 259
Score = 36.7 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 33/223 (14%), Positives = 68/223 (30%), Gaps = 15/223 (6%)
Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
+YEK +++ +N S+A F + +P + V+RK+ + Y
Sbjct: 620 KYPNSPYAVSALYEKGRSYVQGRNNSQAIATFRELLNKYPESPVSRKAATEIGLLYYQND 679
Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSY---------------AQMIRDVPYDQR 153
Y +A + ITQYP S+ + Y + +++
Sbjct: 680 DYNRAIEAYKYVITQYPGSEEARLAMRDLKSIYVEANRVDEFAALAAQMPGVIRFEPNEQ 739
Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213
+ + ++ R+ + + K + +
Sbjct: 740 DSLTYIAAEKVYMKGEIIPARESFTRYLQSYPNGAFSLNAHYYLSLIGKEQKDETGVLEH 799
Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
L Y D+ ++EEA+ E +A +Q R
Sbjct: 800 TGKLLEYPDSPYSEEALLMHGEILFNRKEYKQALADYKQLQAR 842
>gi|226945711|ref|YP_002800784.1| tol-pal system YbgF-like protein [Azotobacter vinelandii DJ]
gi|226720638|gb|ACO79809.1| tol-pal system YbgF-like protein [Azotobacter vinelandii DJ]
Length = 273
Score = 47.9 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 18/111 (16%), Positives = 37/111 (33%), Gaps = 1/111 (0%)
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI-GRYYLKRGEYVAAIPRFQLVLANY 220
I + F +Q A G L +G+ A F V NY
Sbjct: 160 FDLIKTKDFEKASQAFTAFLHKYPNSQYAGNAQYWLGEVNLAKGDLQGAGQAFARVSQNY 219
Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+++ +L + L ++A+ + + +YP A+ + ++
Sbjct: 220 PKHSKVPDSLYKLADVERRLGNTEKAKSALQQVIAQYPGTSAAQLAQRDLQ 270
Score = 40.5 bits (92), Expect = 0.25, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 30/78 (38%), Gaps = 1/78 (1%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ +K ++ A F L Y ++++A A L E +A + A + +
Sbjct: 155 YYDAAFDLIKTKDFEKASQAFTAFLHKYPNSQYAGNAQYWLGEVNLAKGDLQGAGQAFAR 214
Query: 253 IQERYPQ-GYWARYVETL 269
+ + YP+ + L
Sbjct: 215 VSQNYPKHSKVPDSLYKL 232
Score = 37.5 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 17/82 (20%), Positives = 29/82 (35%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
D ++ Y+ A +K ++F KA + F +P + A + V + G
Sbjct: 146 PADPEKEKLYYDAAFDLIKTKDFEKASQAFTAFLHKYPNSQYAGNAQYWLGEVNLAKGDL 205
Query: 111 QQAASLGEEYITQYPESKNVDY 132
Q A YP+ V
Sbjct: 206 QGAGQAFARVSQNYPKHSKVPD 227
>gi|253569409|ref|ZP_04846819.1| TPR domain-containing protein [Bacteroides sp. 1_1_6]
gi|251841428|gb|EES69509.1| TPR domain-containing protein [Bacteroides sp. 1_1_6]
Length = 1003
Score = 47.9 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 34/222 (15%), Positives = 69/222 (31%), Gaps = 22/222 (9%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
+ Y Y + +++++A YF + + + + +
Sbjct: 502 QPNNEMYALANYNLGYIAFHRKDYTQASNYFQKYIQLEKG--------ENRTALADAYNR 553
Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
+ + + G + V Q+ + ++R+V +Y
Sbjct: 554 IGDCHLNVRNFEEAKHYYSQAEQMNTPSGDYSFYQLALVSGLQKDYTGKITLLNRLVGKY 613
Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
+SPY E GR Y+ AI F+ +L Y ++ + +A
Sbjct: 614 PSSPY--------------AVNAIYEKGRSYVLMDNNGQAITSFKELLEKYPESPVSRKA 659
Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
A + Y D+A + E+YP AR +K
Sbjct: 660 AAEIGLLYYQNGNFDQAINAYKQVIEKYPGSEEARLAMRDMK 701
Score = 45.9 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 31/261 (11%), Positives = 68/261 (26%), Gaps = 17/261 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K I ++ C + Q+S + +Y++ +E+N++ A
Sbjct: 1 MKKRISRIICTLLCCAPIAISAQTSEKIT--------SPVNLYKEGKELFQEKNYAAAIP 52
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY-----V 133
+ P A + + + M Y + L +
Sbjct: 53 ALKAFVKQKPTASLLQDAEYMLVSSAYELKDKNRIELLRKYLDCYPDTPYANRIYSLLAS 112
Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
Y Y + + + + R + T + A+
Sbjct: 113 CYFYEGKYDEALALFNSTRLDLLGNEERDDRTYQLATCYMKTDNLKEAAIWFETLRASSP 172
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANY----SDAEHAEEAMARLVEAYVALALMDEAREV 249
R+ L ++ D ++ E + E Y D+A+ V
Sbjct: 173 KYAKDCSYYLAYIRYTQKRYDEALKDFLPLQDDPKYKELVPYYIAEIYAIKKNYDKAQIV 232
Query: 250 VSLIQERYPQGYWARYVETLV 270
YP A + ++
Sbjct: 233 AQNYLSAYPNNEHAAEMYRIL 253
Score = 35.9 bits (80), Expect = 6.5, Method: Composition-based stats.
Identities = 29/224 (12%), Positives = 70/224 (31%), Gaps = 16/224 (7%)
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
Y A ++ ++N+ KA +P A + + Y G+Y QA Y
Sbjct: 214 YYIAEIYAIKKNYDKAQIVAQNYLSAYPNNEHAAEMYRILGDAYYHFGQYHQAVEAFTGY 273
Query: 121 ITQYPESKNVDYVYY----LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
+ + + D +Y ++ L + + + +
Sbjct: 274 LDRDHSAPRRDALYMLGLSYYQTKVYSKAAEMLGQVTTANDALTQNAYLHMGLSYLQLAE 333
Query: 177 GARFYVTVGR----------NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
+ + + + AA + + + ++ F+ L + + +A
Sbjct: 334 KNKARMAFEQAAASNANLQIKEQAAYNYALCLHETSYSAFGESVTAFEKFLNEFPTSPYA 393
Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
E+ LVE Y+ + A + + I + P + ++
Sbjct: 394 EKVSNYLVEVYMNTRSYEAALKSIERIAK--PSAQIMEAKQKIL 435
Score = 35.2 bits (78), Expect = 9.9, Method: Composition-based stats.
Identities = 25/218 (11%), Positives = 55/218 (25%), Gaps = 22/218 (10%)
Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
S +++ ++ E +L+ + NF +A + Q +P + AR ++
Sbjct: 639 AITSFKELLEKYPESPVSRKAAAEIGLLYYQNGNFDQAINAYKQVIEKYPGSEEARLAMR 698
Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
+ + + A+L + + +
Sbjct: 699 DMKSIYVDLNRIDEFAALANAMPGHIRFDASEQDSLTYAAAEKIYARGRTEEAKSSLNKY 758
Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
LQ + + + L
Sbjct: 759 LQTF----------------------PEGAFSLNAHYYLCQIGNEQKNYDMVLLHSGKLL 796
Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
Y + AEEA+ E M EA +++E+
Sbjct: 797 EYPNNPFAEEALIMRAEVQFNQQQMAEALASYKMLKEK 834
>gi|116048899|ref|YP_792300.1| hypothetical protein PA14_51690 [Pseudomonas aeruginosa UCBPP-PA14]
gi|115584120|gb|ABJ10135.1| conserved hypothetical protein [Pseudomonas aeruginosa UCBPP-PA14]
Length = 274
Score = 47.9 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 21/119 (17%), Positives = 48/119 (40%), Gaps = 14/119 (11%)
Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
+ Q + + +Y NS Y A++++ G L +G+ A
Sbjct: 167 KDFDKASQAFNAFLRKYPNSQYSGNAQYWL--------------GEVNLAKGDLQGAGQA 212
Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
F V +Y ++ +++ +L + L D+A+ ++ + +YP A+ + +K
Sbjct: 213 FARVSQSYPSSQKVPDSLYKLADVERRLGNNDKAKGILQQVISQYPGTSAAQLAQRDLK 271
Score = 41.3 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 12/69 (17%), Positives = 27/69 (39%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ +K ++ A F L Y +++++ A L E +A + A + +
Sbjct: 156 YYDAAFDLIKSKDFDKASQAFNAFLRKYPNSQYSGNAQYWLGEVNLAKGDLQGAGQAFAR 215
Query: 253 IQERYPQGY 261
+ + YP
Sbjct: 216 VSQSYPSSQ 224
Score = 38.6 bits (87), Expect = 0.96, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 32/84 (38%)
Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
D ++ Y+ A +K ++F KA + FN R +P + + + V + G
Sbjct: 145 SEPGDPAKEKLYYDAAFDLIKSKDFDKASQAFNAFLRKYPNSQYSGNAQYWLGEVNLAKG 204
Query: 109 KYQQAASLGEEYITQYPESKNVDY 132
Q A YP S+ V
Sbjct: 205 DLQGAGQAFARVSQSYPSSQKVPD 228
>gi|37525409|ref|NP_928753.1| hypothetical protein plu1457 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36784837|emb|CAE13750.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 258
Score = 47.9 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 19/120 (15%), Positives = 42/120 (35%), Gaps = 14/120 (11%)
Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
+ + + V+ Y S Y+ A +++ K+ A
Sbjct: 150 NTKEYDKAIIAFQSFVKSYPKSSYMPNANYWLGQLNYNKGKKD--------------EAA 195
Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
F V+ Y ++ + E++ ++ D+AR V + ++YP A+ E +
Sbjct: 196 YYFATVVKEYPKSQKSGESLYKVGLIMQDKGQKDKARSVYQQVMKQYPGSNAAKLAEKKL 255
Score = 46.7 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 14/69 (20%), Positives = 24/69 (34%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ EY AI FQ + +Y + + A L + DEA +
Sbjct: 141 YDAAVHLAVNTKEYDKAIIAFQSFVKSYPKSSYMPNANYWLGQLNYNKGKKDEAAYYFAT 200
Query: 253 IQERYPQGY 261
+ + YP+
Sbjct: 201 VVKEYPKSQ 209
>gi|94676731|ref|YP_588649.1| hypothetical protein BCI_0192 [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
gi|94219881|gb|ABF14040.1| conserved hypothetical protein [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
Length = 231
Score = 47.9 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 38/196 (19%), Positives = 76/196 (38%), Gaps = 12/196 (6%)
Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
E Y A L++ + +A + + F ++ L + Y Q+A +L
Sbjct: 31 PAETYASARQKLQQGYYKQAIKQLEALDNYYMFGPNTQQLQLDLIYAYYKLSNMQKAQNL 90
Query: 117 GEEYITQYPESKNVDYVYYLV------------GMSYAQMIRDVPYDQRATKLMLQYMSR 164
+ ++ N DYV Y+ + D + + + +
Sbjct: 91 IDRFLRTNANHSNTDYVLYICGLIEMKLDEQALSKYFLFGFNHFERDPKHARAAVISFQQ 150
Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
++ Y +S Y A+ + +N+LA E+ + +Y K G YVA + R + +L+N+ +
Sbjct: 151 LINNYPHSIYAIDAKKILIYLQNRLANYELTVIEFYSKVGAYVAVVTRVKHMLSNFPNNN 210
Query: 225 HAEEAMARLVEAYVAL 240
+A + AY L
Sbjct: 211 ATYQARKHMERAYQQL 226
>gi|298529948|ref|ZP_07017350.1| tol-pal system protein YbgF [Desulfonatronospira thiodismutans
ASO3-1]
gi|298509322|gb|EFI33226.1| tol-pal system protein YbgF [Desulfonatronospira thiodismutans
ASO3-1]
Length = 245
Score = 47.9 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 39/110 (35%), Gaps = 1/110 (0%)
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI-GRYYLKRGEYVAAIPRFQLVLANY 220
+ + F T + LA + EY +I F+ VL ++
Sbjct: 133 LELYFDEQAEQARQAFREFIDTYPEHPLAPNAWYWLAETFYMEKEYPQSILTFRQVLEHF 192
Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
+ A +A+ ++ AY L AR + ++ E YP+ A +
Sbjct: 193 PEDPKAPDALLKIGYAYKRLEDKRNARFYLGVLLEDYPESSAADKARETL 242
>gi|319901963|ref|YP_004161691.1| outer membrane assembly lipoprotein YfiO [Bacteroides helcogenes P
36-108]
gi|319416994|gb|ADV44105.1| outer membrane assembly lipoprotein YfiO [Bacteroides helcogenes P
36-108]
Length = 267
Score = 47.9 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 41/226 (18%), Positives = 77/226 (34%), Gaps = 15/226 (6%)
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
YE A + + +++A N+ A +SL M Y+ YQ AA +Y
Sbjct: 34 YEAAKTYFAKGQYNRAATLLNELIAILKGTDKAEESLYMLGMSYYNQKDYQTAAQTFIQY 93
Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
YP + + G + + DQ T +Q + +E + S + A+
Sbjct: 94 YNVYPRGTYTELARFHAGKALYLDTPEPRLDQSGTYSAIQQLQMFMEYFPKSAKKEEAQN 153
Query: 181 YVTVGRNQLAAKEV-----EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
+ +++L KE Y + + Q L +Y E+ ++
Sbjct: 154 MIFALQDKLVMKEYLSAKLYYNLGNYLGNNYQSCVITAQNALKDYPYTNLREDLSILILR 213
Query: 236 AYVALA----------LMDEAREVVSLIQERYPQGYWARYVETLVK 271
A LA EA + + +P+ + + E + K
Sbjct: 214 AKYELAVYSVEDKKPERYREAIDEYYAFKNEFPESKYIKEAERIFK 259
>gi|15617006|ref|NP_240219.1| hypothetical protein BU402 [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
gi|219681758|ref|YP_002468144.1| hypothetical 27.8 kDa lipoprotein [Buchnera aphidicola str. 5A
(Acyrthosiphon pisum)]
gi|219682313|ref|YP_002468697.1| hypothetical 27.8 kDa lipoprotein [Buchnera aphidicola str. Tuc7
(Acyrthosiphon pisum)]
gi|257471460|ref|ZP_05635459.1| hypothetical 27.8 kDa lipoprotein [Buchnera aphidicola str. LSR1
(Acyrthosiphon pisum)]
gi|18202269|sp|P57482|Y402_BUCAI RecName: Full=UPF0169 protein BU402
gi|25403614|pir||A84977 hypothetical protein [imported] - Buchnera sp. (strain APS)
gi|10039071|dbj|BAB13105.1| hypothetical protein [Buchnera aphidicola str. APS (Acyrthosiphon
pisum)]
gi|219622046|gb|ACL30202.1| hypothetical 27.8 kDa lipoprotein [Buchnera aphidicola str. Tuc7
(Acyrthosiphon pisum)]
gi|219624601|gb|ACL30756.1| hypothetical 27.8 kDa lipoprotein [Buchnera aphidicola str. 5A
(Acyrthosiphon pisum)]
gi|311086139|gb|ADP66221.1| hypothetical 27.8 kDa lipoprotein [Buchnera aphidicola str. LL01
(Acyrthosiphon pisum)]
gi|311086712|gb|ADP66793.1| hypothetical 27.8 kDa lipoprotein [Buchnera aphidicola str. TLW03
(Acyrthosiphon pisum)]
gi|311087297|gb|ADP67377.1| hypothetical 27.8 kDa lipoprotein [Buchnera aphidicola str. JF99
(Acyrthosiphon pisum)]
gi|311087808|gb|ADP67887.1| hypothetical 27.8 kDa lipoprotein [Buchnera aphidicola str. JF98
(Acyrthosiphon pisum)]
Length = 246
Score = 47.9 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 55/249 (22%), Positives = 104/249 (41%), Gaps = 17/249 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K IF + + F + QS + Y +YEK+ L+++NF A
Sbjct: 1 MKKKNSIIFVFMILFFNSTVQSQSFKKNYFTER------YTLYEKSNKELRKENFDNAIS 54
Query: 79 YFNQCSRDFPFAGV-ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
+ ++ A + K + + Y + QA EE++ YP N+DYV Y+
Sbjct: 55 ILEKIKKNNNTANISNDKIQIDLIYAYYKILNFDQARKNIEEFMYFYPNHPNIDYVVYIQ 114
Query: 138 GMSYAQMI----------RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
+ + D K + + +Y S YV A+ + +N
Sbjct: 115 CLISMSLDKNRFFSVFPINYYKNDYFYAKNAFFQLKYFIYQYPKSRYVVNAKKNLIYIKN 174
Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
+L+ ++ I ++Y EY+A I R + +L YS+ A +A+ + ++Y AL + D A+
Sbjct: 175 RLSEHDLSILKFYFFHKEYIAVINRGEEMLQRYSETPSARKALIYIEKSYYALKIFDTAK 234
Query: 248 EVVSLIQER 256
++ +I
Sbjct: 235 KISKIILLN 243
>gi|237745073|ref|ZP_04575554.1| conserved hypothetical protein [Fusobacterium sp. 7_1]
gi|260494851|ref|ZP_05814981.1| conserved hypothetical protein [Fusobacterium sp. 3_1_33]
gi|229432302|gb|EEO42514.1| conserved hypothetical protein [Fusobacterium sp. 7_1]
gi|260198013|gb|EEW95530.1| conserved hypothetical protein [Fusobacterium sp. 3_1_33]
Length = 423
Score = 47.9 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 29/247 (11%), Positives = 70/247 (28%), Gaps = 23/247 (9%)
Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY-FNQCSRDFPFAGVARKSLLMSAFV 103
+ D+ +Y+ +SK Y F + + D + + ++L
Sbjct: 177 QDSANESKDLENAVTLYKM---MFPAGRYSKEVNYLFLKYAYDTRNSSLMHEALAGVKND 233
Query: 104 QYSAGKYQ-----------QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
S + + + + VG + D + +
Sbjct: 234 FSSYSDNEKAIILRVAKLTNKDIFVPSETYKTNNPELKSALQEYVGHKGSLDKTDKVFIE 293
Query: 153 RATKLMLQYMSRIVERYTNSPYV-KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
+A K + + +V + + ++ + E
Sbjct: 294 KAKKEAPETANEVVRDKIKAVIDGTVPTKIGSSSDSKKTNSKTETSGESYYDKAMKNLNS 353
Query: 212 RFQLVLANYSDAEHAE-------EAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
++ + N+ + E E + +Y L E + + L+++ +P WA+
Sbjct: 354 NPRVAIENFKKSLSTEKMQDKKPEIYYNIASSYAKLGNKVEVTKYLRLLKQEFPNSEWAK 413
Query: 265 YVETLVK 271
E L K
Sbjct: 414 KSEVLTK 420
>gi|323344856|ref|ZP_08085080.1| hypothetical protein HMPREF0663_11616 [Prevotella oralis ATCC
33269]
gi|323094126|gb|EFZ36703.1| hypothetical protein HMPREF0663_11616 [Prevotella oralis ATCC
33269]
Length = 1147
Score = 47.9 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 16/178 (8%), Positives = 42/178 (23%), Gaps = 2/178 (1%)
Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147
+ + + + K + + + + +
Sbjct: 491 QNGEWYFYNQMAVNQGKIAFQKLWGKRENIDNWQRINKTVVAHTGEVDAMTDAIRDSLAR 550
Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
+ + K + + N + + K
Sbjct: 551 QAEIEDSLKQLTNDAQNDPHKREYYLAQIPFTQEQLQASNLIIEDGLYNSGVIFKDYLDN 610
Query: 208 AA--IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
+ + +Y D EH + A L Y L + A + ++++YP+ W
Sbjct: 611 LKLSERALRRLTESYPDYEHTDNAYYHLFLLYSRLNMPSLAESYIQKLRQQYPKSEWT 668
>gi|304312903|ref|YP_003812501.1| hypothetical protein HDN1F_32850 [gamma proteobacterium HdN1]
gi|301798636|emb|CBL46868.1| Conserved hypothetical protein [gamma proteobacterium HdN1]
Length = 314
Score = 47.9 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 13/83 (15%), Positives = 30/83 (36%)
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
A + + + A FQ +L Y+D +A+ +L + D A+
Sbjct: 230 NAHYWLGELYMVAQPTDLDRAKAHFQELLKYYADNPKVPDALFKLGKLSALRGENDRAKL 289
Query: 249 VVSLIQERYPQGYWARYVETLVK 271
+ + + +P A + ++
Sbjct: 290 YFNRVIKEFPDTQAATLAKDYLR 312
>gi|300715891|ref|YP_003740694.1| conserved uncharacterized protein [Erwinia billingiae Eb661]
gi|299061727|emb|CAX58843.1| conserved uncharacterized protein [Erwinia billingiae Eb661]
Length = 272
Score = 47.9 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 12/60 (20%), Positives = 24/60 (40%)
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
++ + AI FQ + Y D+ + A L + D+A + + + YP+
Sbjct: 164 EKKQNEQAISAFQAFVKKYPDSTYQPNANYWLGQLNYNKGKKDDAAYYFATVVKNYPKSP 223
Score = 46.7 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 16/111 (14%), Positives = 39/111 (35%), Gaps = 14/111 (12%)
Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
+++ + + V++Y +S Y A +++ K+ A
Sbjct: 164 EKKQNEQAISAFQAFVKKYPDSTYQPNANYWLGQLNYNKGKKD--------------DAA 209
Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
F V+ NY + + +A+ ++ +A+ V + + YP
Sbjct: 210 YYFATVVKNYPKSPKSPDALYKVGVIMQEKGDTAKAKAVYQQVSKLYPNSD 260
>gi|256026723|ref|ZP_05440557.1| hypothetical protein PrD11_01786 [Fusobacterium sp. D11]
gi|289764719|ref|ZP_06524097.1| conserved hypothetical protein [Fusobacterium sp. D11]
gi|289716274|gb|EFD80286.1| conserved hypothetical protein [Fusobacterium sp. D11]
Length = 423
Score = 47.9 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 29/247 (11%), Positives = 70/247 (28%), Gaps = 23/247 (9%)
Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY-FNQCSRDFPFAGVARKSLLMSAFV 103
+ D+ +Y+ +SK Y F + + D + + ++L
Sbjct: 177 QDSANESKDLENAVTLYKM---MFPAGRYSKEVNYLFLKYAYDTRNSSLMHEALAGIKND 233
Query: 104 QYSAGKYQ-----------QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
S + + + + VG + D + +
Sbjct: 234 FSSYSDNEKATILRVAKLTNKDIFVPSETYKTNNPELKSALQEYVGHKGSLDKTDKVFIE 293
Query: 153 RATKLMLQYMSRIVERYTNSPYV-KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
+A K + + +V + + ++ + E
Sbjct: 294 KAKKEAPETANEVVRDKIKAVIDGTVPTKIGSSSDSKKTNSKTETSGESYYDKAMKNLNS 353
Query: 212 RFQLVLANYSDAEHAE-------EAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
++ + N+ + E E + +Y L E + + L+++ +P WA+
Sbjct: 354 NPRVAIENFKKSLSTEKMQDKKPEIYYNIASSYAKLGNKVEVTKYLRLLKQEFPNSEWAK 413
Query: 265 YVETLVK 271
E L K
Sbjct: 414 KSEVLTK 420
>gi|197117090|ref|YP_002137517.1| pentapeptide repeat protein [Geobacter bemidjiensis Bem]
gi|197086450|gb|ACH37721.1| pentapeptide repeat protein [Geobacter bemidjiensis Bem]
Length = 848
Score = 47.9 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 14/65 (21%), Positives = 26/65 (40%)
Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
G ++ EY AI ++L Y D + A+ L A+ +A + ++
Sbjct: 62 GFNAYQKKEYKTAIDSMSVLLKKYPDTPLKDMAIFWLARAHYKAGHQQDAAKYMAQFLRE 121
Query: 257 YPQGY 261
YP+
Sbjct: 122 YPESP 126
>gi|301063194|ref|ZP_07203745.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2]
gi|300442689|gb|EFK06903.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2]
Length = 861
Score = 47.9 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 28/78 (35%)
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+ Y + ++ I +L Y + A E + Y+ ++AR
Sbjct: 779 YQYAMSYYREKDWKLTIFWLNWLLETYPETRRAAEVYYHMGLCYLNQGKTEQARVWFQKT 838
Query: 254 QERYPQGYWARYVETLVK 271
R+P WA + + ++
Sbjct: 839 VNRFPGTNWAGFAKDRLQ 856
Score = 35.9 bits (80), Expect = 6.2, Method: Composition-based stats.
Identities = 28/172 (16%), Positives = 60/172 (34%), Gaps = 22/172 (12%)
Query: 3 AVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE 62
A R F+ +AY+ F + + + + FL ++ Y
Sbjct: 698 AFRKRLSKAFDRYAYKAICFCMGLLTMMIIYFLA--------------RLAPQFPVLPYN 743
Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
K + E+++ A YF + +FP + ++ A Y ++ +
Sbjct: 744 KGIKAFGEEDYGVARGYFQKVMEEFPQTVIVDQAAYQYAMSYYREKDWKLTIFWLNWLLE 803
Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
YPE++ VYY +G+ Y + + + + V R+ + +
Sbjct: 804 TYPETRRAAEVYYHMGLCYLNQGKT--------EQARVWFQKTVNRFPGTNW 847
>gi|322435642|ref|YP_004217854.1| Lytic transglycosylase catalytic [Acidobacterium sp. MP5ACTX9]
gi|321163369|gb|ADW69074.1| Lytic transglycosylase catalytic [Acidobacterium sp. MP5ACTX9]
Length = 781
Score = 47.9 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 21/206 (10%), Positives = 57/206 (27%), Gaps = 10/206 (4%)
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
+ A + + KA + P + A ++ + ++ + +
Sbjct: 240 FALAKAYQAQGESGKAAGLYRYIYVATPLSYEAGQARAQMLAMGQGPTAAERKVHADQLF 299
Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
+ +++Y +A + L+ S + + +
Sbjct: 300 NAKRYGEASIEYASVKND----------SSLGQADRDALEIYSAVCDLKLKRLSRRDVDK 349
Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
+ A K + V+ ++ Y ++ EEA+ Y+
Sbjct: 350 LPATTDDTAALKLYLYAEISRTEKDRVSHQSIITQMVDKYPNSRWTEEALYSGGNMYLLT 409
Query: 241 ALMDEAREVVSLIQERYPQGYWARYV 266
+A L+ + +P +A
Sbjct: 410 HDSTQALYHYGLLVQHFPNSTYAPSA 435
Score = 38.6 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 22/220 (10%), Positives = 47/220 (21%), Gaps = 13/220 (5%)
Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA------------GKYQ 111
A + + +A + D R +L + + V
Sbjct: 295 ADQLFNAKRYGEASIEYASVKNDSSLGQADRDALEIYSAVCDLKLKRLSRRDVDKLPATT 354
Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
+ + Y+ D V + ++ M + T
Sbjct: 355 DDTAALKLYLYAEISRTEKDRVSHQSIITQMVDKYPNSRWTEEALYSGGNMYLLTHDSTQ 414
Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231
+ Y G + + + Y A + Y+ A A+
Sbjct: 415 ALYHYGLLVQHFPNSTYAPSAHWRMAWMNYRLRRYPEAARLMDEQVVRYAAGTEASSALY 474
Query: 232 RLVEAYV-ALALMDEAREVVSLIQERYPQGYWARYVETLV 270
Y +A + Y Y+ +
Sbjct: 475 WRGRIYEDEEKDFGQAANYYRALSANYNNFYYGVLARQRL 514
>gi|225850351|ref|YP_002730585.1| TPR Domain containing protein [Persephonella marina EX-H1]
gi|225646249|gb|ACO04435.1| TPR Domain containing protein [Persephonella marina EX-H1]
Length = 432
Score = 47.9 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 30/238 (12%), Positives = 68/238 (28%), Gaps = 12/238 (5%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K + + F+ + + Y Y+ + +L N ++A
Sbjct: 1 MKKIFKFALLFVFLSFVFSCAPKPAEYEEKRIQNSQYY----YKIGLSYLNSGNIAQAIY 56
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV-----DYV 133
Y N+ P +L ++ + ++ E + PE+
Sbjct: 57 YLNKAYEIDPEDPDILNALGIAYTNVKEYSRAKEFFLKSIEILPDKPETYTNLGVLLAQE 116
Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
+ + R + L ++ + + N P + A
Sbjct: 117 GNYEQALWYLEKAIENPNYRNKEKALYNIAVVYRKMGNLPKFEEALKRTISYNPYFMNAY 176
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
+ +G YY+ + Y A F + + L +AY L +++R
Sbjct: 177 ITLGNYYILQKRYTDAYDIFTRAVNAGLVNPYI---YLGLGKAYYYLGEYEKSRYFFQ 231
>gi|53804446|ref|YP_113695.1| hypothetical protein MCA1231 [Methylococcus capsulatus str. Bath]
gi|53758207|gb|AAU92498.1| conserved hypothetical protein [Methylococcus capsulatus str. Bath]
Length = 285
Score = 47.9 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 17/129 (13%), Positives = 44/129 (34%), Gaps = 14/129 (10%)
Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
++ RY + Y ++++ G +
Sbjct: 164 YQRAFGTLKDGRFAEAIKEFKSFTARYPSGDYADNGQYWL--------------GEAHYV 209
Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
++ +A FQ ++ N+ + +A +L + AR++++ + +RYP
Sbjct: 210 NRDFSSAKEAFQKLIKNFPQSAKVPDAALKLAYIESDTGQIASARQMLNDVIKRYPGSSA 269
Query: 263 ARYVETLVK 271
A+ E ++
Sbjct: 270 AKQAEKRLQ 278
Score = 37.9 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 34/90 (37%)
Query: 43 SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102
SR V +D + Y++A LK+ F++A + F + +P A
Sbjct: 146 SRPVAPPPASDGAAREAAYQRAFGTLKDGRFAEAIKEFKSFTARYPSGDYADNGQYWLGE 205
Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDY 132
Y + A ++ I +P+S V
Sbjct: 206 AHYVNRDFSSAKEAFQKLIKNFPQSAKVPD 235
>gi|302339692|ref|YP_003804898.1| hypotheticalprotein [Spirochaeta smaragdinae DSM 11293]
gi|301636877|gb|ADK82304.1| TPR repeat-containing protein [Spirochaeta smaragdinae DSM 11293]
Length = 962
Score = 47.5 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 22/227 (9%), Positives = 55/227 (24%), Gaps = 13/227 (5%)
Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV-- 103
VY D+ R Y ++ A F + SR + + + +
Sbjct: 569 VYTDNPDHELSARSRYLSGWALYTLGSYKDAALAFGEYSRQMSGSEAEKGLFMYAKSYAA 628
Query: 104 --------QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
+ +S + + + +
Sbjct: 629 AGDVGRASSGFQELSGKKSSAYADDALYEYAQMMQNNGNDEEAIRSYYQLWQQFKSSPYA 688
Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA---AKEVEIGRYYLKRGEYVAAIPR 212
L ++ A ++ + A A K A+
Sbjct: 689 GDALYNRGELLFLSGQYRKAGEAFYFYRTRFPKGALVDASLHYGALAARKEAAPFQAVLL 748
Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
++ ++ + + EA+ E Y ++ + + + + YP
Sbjct: 749 WEKLIDEHPKSAFYPEALQGCAELYRQAGEYRKSIAMYTKLLDFYPD 795
Score = 37.5 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 34/79 (43%)
Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
A+ ++G+Y+ A+ R++ ++ Y +E+ +A R +EA
Sbjct: 30 QDEASALFREAETRFRKGDYLFALQRYEELIRQYPVSEYVADAQFRRAVILYRTGKAEEA 89
Query: 247 REVVSLIQERYPQGYWARY 265
+ +++RY + RY
Sbjct: 90 LSLFERVEKRYASTRFRRY 108
Score = 35.9 bits (80), Expect = 5.4, Method: Composition-based stats.
Identities = 29/227 (12%), Positives = 70/227 (30%), Gaps = 19/227 (8%)
Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
A+ KE +A + + + P + ++L A + AG+Y+++ ++ + +
Sbjct: 733 ALAARKEAAPFQAVLLWEKLIDEHPKSAFYPEALQGCAELYRQAGEYRKSIAMYTKLLDF 792
Query: 124 YPESKNVDYVYYLVGMSYAQMI-------------RDVPYDQRATKLMLQYMSRIVERYT 170
YP+ + + + + + R+
Sbjct: 793 YPDIAKKANAEREIETLGKMLQGTGSREAALQVTIEQESTGTKKGVEAMVELGRLYYDRY 852
Query: 171 NSPYV------KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
+ + A +G ++GE A+ F A + +
Sbjct: 853 DRQEEKAKSLLEKVVAEKDRFPAPAAEAYYLLGEMAAEKGEAKKAVEHFLDAAALGGEGD 912
Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+ ++ R E D A+ +V I+ +P W L++
Sbjct: 913 TSARSLYRAAEVAADAGDHDLAQTMVRQIERSFPDSEWTLRGRELLE 959
Score = 35.5 bits (79), Expect = 8.8, Method: Composition-based stats.
Identities = 23/206 (11%), Positives = 54/206 (26%), Gaps = 24/206 (11%)
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
Y + + + + +A + F++ + + + + Y G Y +A
Sbjct: 510 YLLGLSLVAVKEYDQALDVFDRMLSRKIDDDITPYARFYAGWAAYRTGAYSRAVDFFRAV 569
Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
T P+ + Y + Y + K + + S KG
Sbjct: 570 YTDNPDHELSARSRY--------LSGWALYTLGSYKDAALAFGEYSRQMSGSEAEKGLFM 621
Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
Y G L + +A++A+ +
Sbjct: 622 YAKSYAAAGDVGRASSGFQELSGK----------------KSSAYADDALYEYAQMMQNN 665
Query: 241 ALMDEAREVVSLIQERYPQGYWARYV 266
+EA + +++ +A
Sbjct: 666 GNDEEAIRSYYQLWQQFKSSPYAGDA 691
>gi|149916642|ref|ZP_01905144.1| lipoprotein, putative [Plesiocystis pacifica SIR-1]
gi|149822359|gb|EDM81748.1| lipoprotein, putative [Plesiocystis pacifica SIR-1]
Length = 323
Score = 47.5 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 21/121 (17%), Positives = 41/121 (33%), Gaps = 14/121 (11%)
Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
Y + + IV + N Y A ++ A A
Sbjct: 214 YKDGRYAEAEKAFAAIVRAHPNDDYADNALYWQGESAYDQAHYA--------------DA 259
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
+ F V+ Y A +A+ ++ Y L D AR+V++ + YP+ ++ +
Sbjct: 260 LKAFTAVVERYGGGNKAPDALLKIGLCYGRLGDADNARDVLTQLIAAYPRAAASKIAKRK 319
Query: 270 V 270
+
Sbjct: 320 L 320
>gi|261343490|ref|ZP_05971135.1| putative periplasmic protein [Providencia rustigianii DSM 4541]
gi|282568636|gb|EFB74171.1| putative periplasmic protein [Providencia rustigianii DSM 4541]
Length = 262
Score = 47.5 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 17/127 (13%), Positives = 43/127 (33%), Gaps = 14/127 (11%)
Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
+ + + + ++ Y S Y A +++ +K+
Sbjct: 147 QLAMNSKSKAQIDEAIGALQGFIKTYPKSGYQSNANYWLGQLNYNKGSKD---------- 196
Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
A F V+ Y ++ + EA+ ++ D+A+ V + ++YP +
Sbjct: 197 ----DAAFYFATVVKQYPKSQKSSEALYKVGLIMQDKGQKDKAKAVYQQVLKQYPNSAGS 252
Query: 264 RYVETLV 270
+ E +
Sbjct: 253 KLAEKKL 259
>gi|298505600|gb|ADI84323.1| lytic transglycosylase domain protein [Geobacter sulfurreducens
KN400]
Length = 748
Score = 47.5 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 29/225 (12%), Positives = 60/225 (26%), Gaps = 12/225 (5%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
E+ ++ + +A FN AG + L +Y
Sbjct: 219 PAVPLTPDELLKRGTTLYNLGKYERALAVFNTIPLKEQLAGFNDRVALKIGETLLKLRRY 278
Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY--------- 161
+ AA I + P+ + D +L+ + + D KL
Sbjct: 279 KDAARTFSSLIEREPKREIADEARFLLARAQNKAGNDDEAFLGFLKLAETAPTSEWADNA 338
Query: 162 -MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY--LKRGEYVAAIPRFQLVLA 218
+ R Y + K + R +
Sbjct: 339 LLEAAFVRKFQGRYADQLAVLEKLLTTYPGTKLKPRAMWETAWARYNTGDYRSAAESFRL 398
Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
+ A++ E A+ + + AR+ +++ E YP ++
Sbjct: 399 LTASADYRERALYWHGRSLQRIGEETVARQSFAMLAEEYPFSFYT 443
Score = 45.9 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 35/208 (16%), Positives = 62/208 (29%), Gaps = 3/208 (1%)
Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
A +++ +A + + +P + + L +A + ++A
Sbjct: 137 ADAQFARKDYRQALASYIRFIELYPSGTDSVTANLKTALCREGLDDPRRAVQELRAIWLA 196
Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
YP S + + A VP + + +Y + V
Sbjct: 197 YPASPVAETAEQELKRLEALGFPAVPLTPDELLKRGTTLYNL-GKYERALAVFNTIPLKE 255
Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243
++IG LK Y A F ++ E A+EA L A
Sbjct: 256 QLAGFNDRVALKIGETLLKLRRYKDAARTFSSLIEREPKREIADEARFLLARAQNKAGND 315
Query: 244 DEAREVVSLIQERYPQGYWARYVETLVK 271
DEA + E P WA L++
Sbjct: 316 DEAFLGFLKLAETAPTSEWADNA--LLE 341
Score = 39.0 bits (88), Expect = 0.75, Method: Composition-based stats.
Identities = 32/208 (15%), Positives = 65/208 (31%), Gaps = 2/208 (0%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
+ A K N +A+ F + + P + A +LL +AFV+ G+
Sbjct: 292 EPKREIADEARFLLARAQNKAGNDDEAFLGFLKLAETAPTSEWADNALLEAAFVRKFQGR 351
Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK-LMLQYMSRIVER 168
Y ++ E+ +T YP +K + + +
Sbjct: 352 YADQLAVLEKLLTTYPGTKLKPRAMWETAWARYNTGDYRSAAESFRLLTASADYRERALY 411
Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
+ + V + A+E Y + L++ +
Sbjct: 412 WHGRSLQRIGEETVARQSFAMLAEEYPFSFYTFTATDPAPQEGAIPLIVHDLRQTIS-PP 470
Query: 229 AMARLVEAYVALALMDEAREVVSLIQER 256
A A +A+ L D+AR +S+ ++
Sbjct: 471 AGHERARALIAMGLHDQARSELSIARKN 498
>gi|39996584|ref|NP_952535.1| soluble lytic murein transglycosylase, putative [Geobacter
sulfurreducens PCA]
gi|39983465|gb|AAR34858.1| soluble lytic murein transglycosylase, putative [Geobacter
sulfurreducens PCA]
Length = 747
Score = 47.5 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 29/225 (12%), Positives = 60/225 (26%), Gaps = 12/225 (5%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
E+ ++ + +A FN AG + L +Y
Sbjct: 219 PAVPLTPDELLKRGTTLYNLGKYERALAVFNTIPLKEQLAGFNDRVALKIGETLLKLRRY 278
Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY--------- 161
+ AA I + P+ + D +L+ + + D KL
Sbjct: 279 KDAARTFSSLIEREPKREIADEARFLLARAQNKAGNDDEAFLGFLKLAETAPTSEWADNA 338
Query: 162 -MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY--LKRGEYVAAIPRFQLVLA 218
+ R Y + K + R +
Sbjct: 339 LLEAAFVRKFQGRYADQLAVLEKLLTTYPGTKLKPRAMWETAWARYNTGDYRSAAESFRL 398
Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
+ A++ E A+ + + AR+ +++ E YP ++
Sbjct: 399 LTASADYRERALYWHGRSLQRIGEETVARQSFAMLAEEYPFSFYT 443
Score = 44.4 bits (102), Expect = 0.018, Method: Composition-based stats.
Identities = 35/208 (16%), Positives = 61/208 (29%), Gaps = 3/208 (1%)
Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
A + + +A + + +P + + L +A + ++A
Sbjct: 137 ADAQFARKEYRQALASYIRFIELYPSGTDSVTANLKTALCREGLDDPRRAVQELRAIWLA 196
Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
YP S + + A VP + + +Y + V
Sbjct: 197 YPASPVAETAEQELKRLEALGFPAVPLTPDELLKRGTTLYNL-GKYERALAVFNTIPLKE 255
Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243
++IG LK Y A F ++ E A+EA L A
Sbjct: 256 QLAGFNDRVALKIGETLLKLRRYKDAARTFSSLIEREPKREIADEARFLLARAQNKAGND 315
Query: 244 DEAREVVSLIQERYPQGYWARYVETLVK 271
DEA + E P WA L++
Sbjct: 316 DEAFLGFLKLAETAPTSEWADNA--LLE 341
Score = 39.0 bits (88), Expect = 0.75, Method: Composition-based stats.
Identities = 32/208 (15%), Positives = 65/208 (31%), Gaps = 2/208 (0%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
+ A K N +A+ F + + P + A +LL +AFV+ G+
Sbjct: 292 EPKREIADEARFLLARAQNKAGNDDEAFLGFLKLAETAPTSEWADNALLEAAFVRKFQGR 351
Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK-LMLQYMSRIVER 168
Y ++ E+ +T YP +K + + +
Sbjct: 352 YADQLAVLEKLLTTYPGTKLKPRAMWETAWARYNTGDYRSAAESFRLLTASADYRERALY 411
Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
+ + V + A+E Y + L++ +
Sbjct: 412 WHGRSLQRIGEETVARQSFAMLAEEYPFSFYTFTATDPAPQEGAIPLIVHDLRQTIS-PP 470
Query: 229 AMARLVEAYVALALMDEAREVVSLIQER 256
A A +A+ L D+AR +S+ ++
Sbjct: 471 AGHERARALIAMGLHDQARSELSIARKN 498
>gi|73670517|ref|YP_306532.1| hypothetical protein Mbar_A3062 [Methanosarcina barkeri str.
Fusaro]
gi|72397679|gb|AAZ71952.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro]
Length = 391
Score = 47.5 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 29/232 (12%), Positives = 59/232 (25%), Gaps = 10/232 (4%)
Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
+ ++++ +YE+ V+ ++ A E F+ + P A +
Sbjct: 122 EGEDPEKSNLKSTESLYEEGVILYRQGRLRLALEAFDMVLLENPRHFPALFHRGNTLLKL 181
Query: 105 YSAGKYQQAASLGEEYITQYPESKN---VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
+ + +P V + K +
Sbjct: 182 KRYEEALETFESASRINPNHPGLWTNSGFALVKLEHLRQALEAFEKSISLNPVQKNAWEG 241
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
++ R + A E G+ YLK GE + F+ L
Sbjct: 242 KEAVLVRVRKCEEKLKEFEKSLKRNPEDADIWFEKGKLYLKLGELEKSREAFEKALEEK- 300
Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLI---QERYPQGYWARYVETLV 270
EA + EA + + +P+ W L+
Sbjct: 301 --SENAEAWHLRGKILFETGSEKEALHAFEMALRKKPNFPEA-WYEKGRVLL 349
Score = 40.5 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 21/197 (10%), Positives = 56/197 (28%), Gaps = 6/197 (3%)
Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
++ + LK + + +A E F SR P + + + +A
Sbjct: 170 ALFHRGNTLLKLKRYEEALETFESASRINPNHPGLWTNSGFALVKLEHLRQALEAFEKSI 229
Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD-QRATKLMLQYMSR--IVERYTNSPYV 175
+ + + +++ +R + + + + +
Sbjct: 230 SLNPVQKNAWEGKEAVLVRVRKCEEKLKEFEKSLKRNPEDADIWFEKGKLYLKLGELEKS 289
Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
+ A +++ A G+ + G A+ F++ L + EA
Sbjct: 290 REAFEKALEEKSENAEAWHLRGKILFETGSEKEALHAFEMALRKKPNFP---EAWYEKGR 346
Query: 236 AYVALALMDEAREVVSL 252
++L A +
Sbjct: 347 VLLSLGNPKGAENAFKI 363
>gi|124514248|gb|EAY55762.1| protein of unknown function [Leptospirillum rubarum]
Length = 264
Score = 47.5 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 18/175 (10%), Positives = 47/175 (26%)
Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
+ + + + + E+ ++ ++K D+ +
Sbjct: 66 WHIYSDKKKKEQEAAALETHAEQMFSKNMQNKKADWSSIDQLFEKVVKDYPDSSSAKVAP 125
Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
L L + + + + G ++ E +
Sbjct: 126 LFLASIQNQLAQPQKAVNWLHEGLEKNSGDTKILPFYYESLGVTFMSMKEYDQALAMFQK 185
Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+ + A+ A + + Y L A +Q+++P WA E +K
Sbjct: 186 VIKFQGKTLADAAYYNIGKVYELLNQPALAILNYRKLQKKFPSSPWASEAEAYIK 240
>gi|294645887|ref|ZP_06723563.1| tetratricopeptide repeat protein [Bacteroides ovatus SD CC 2a]
gi|292638767|gb|EFF57109.1| tetratricopeptide repeat protein [Bacteroides ovatus SD CC 2a]
Length = 601
Score = 47.5 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 34/222 (15%), Positives = 70/222 (31%), Gaps = 22/222 (9%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
+ Y Y + +++++A YF + + + + + +
Sbjct: 98 QPNNEMYALANYNLGYIAFHRKDYTQASNYFQKYIQLEKG--------ENATALADAYNR 149
Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
+ + + G + V Q+ + ++R+V +Y
Sbjct: 150 IGDCHLHVRNFEEAKQYYSQAEQMNTSSGDYSFYQLALVSGLQKDYTGKITLLNRLVGKY 209
Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
SPY E GR Y+ AI F+ +L Y ++ + +A
Sbjct: 210 PASPY--------------AVNAIYEKGRSYVLMDNNNQAITSFKELLTKYPESPVSRKA 255
Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
A + Y ++A E + E+YP AR +K
Sbjct: 256 AAEIGLLYYQKGDYNQAIEAYKQVIEKYPGSEEARLAMRDLK 297
Score = 46.3 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 25/245 (10%), Positives = 59/245 (24%), Gaps = 18/245 (7%)
Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKS 96
+ R + Q+ +++ +F +A +Y NQ +
Sbjct: 11 KSIDRIAKPSAQILEAKQKILFQLGTQSFANADFEQALKYLNQSIAIGQYNRQTKADAYY 70
Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
++ + + +T P ++ Y +G K
Sbjct: 71 WCGESYYRLNRMVEAARDFNAYLQLTTQPNNEMYALANYNLGYIAFHRKDYTQASNYFQK 130
Query: 157 --------------LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
+ N K
Sbjct: 131 YIQLEKGENATALADAYNRIGDCHLHVRNFEEAKQYYSQAEQMNTSSGDYSFYQLALVSG 190
Query: 203 -RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
+ +Y I ++ Y + +A A+ +YV + ++A + +YP+
Sbjct: 191 LQKDYTGKITLLNRLVGKYPASPYAVNAIYEKGRSYVLMDNNNQAITSFKELLTKYPESP 250
Query: 262 WARYV 266
+R
Sbjct: 251 VSRKA 255
Score = 36.7 bits (82), Expect = 3.9, Method: Composition-based stats.
Identities = 26/218 (11%), Positives = 59/218 (27%), Gaps = 22/218 (10%)
Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
S +++ ++ E +L+ ++ ++++A E + Q +P + AR ++
Sbjct: 235 AITSFKELLTKYPESPVSRKAAAEIGLLYYQKGDYNQAIEAYKQVIEKYPGSEEARLAMR 294
Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
+ + + A+L N + + +
Sbjct: 295 DLKSIYVDLNRIDEFAALANAMPGHIRFDANEQDSLTYAAAEKIYARGRMEEAKTSLNKY 354
Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
LQ + + I L
Sbjct: 355 LQTF----------------------PEGAFSLNAHYYLCLIGNEQKNYDMILLHSGKLL 392
Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
Y + AEEA+ E M EA +++E+
Sbjct: 393 EYPNNPFAEEALILRAEVQFNQQNMAEALASYKMLKEK 430
>gi|310767032|gb|ADP11982.1| putative exported protein [Erwinia sp. Ejp617]
Length = 265
Score = 47.5 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
++ +Y AI FQ + Y D+ + A L + D+A + + ++YP+
Sbjct: 157 EKKQYDNAISAFQAFVKQYPDSTYQPNANYWLGQLNYNKGKKDDAAYYFATVVKKYPKSP 216
Query: 262 WARYVETLVK 271
+ + L+K
Sbjct: 217 --KSADALLK 224
Score = 43.6 bits (100), Expect = 0.026, Method: Composition-based stats.
Identities = 15/120 (12%), Positives = 39/120 (32%), Gaps = 14/120 (11%)
Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
+++ + V++Y +S Y A +++ K+ A
Sbjct: 157 EKKQYDNAISAFQAFVKQYPDSTYQPNANYWLGQLNYNKGKKD--------------DAA 202
Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
F V+ Y + + +A+ ++ +A+ V + + Y A+ +
Sbjct: 203 YYFATVVKKYPKSPKSADALLKVGVIMQEKGDKAKAKAVYQQVIKLYSNSEAAKTAQKRF 262
>gi|228470608|ref|ZP_04055465.1| putative TPR domain protein [Porphyromonas uenonis 60-3]
gi|228307735|gb|EEK16711.1| putative TPR domain protein [Porphyromonas uenonis 60-3]
Length = 1003
Score = 47.5 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 27/223 (12%), Positives = 60/223 (26%), Gaps = 15/223 (6%)
Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFP-FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
A L ++ + +A + + + + + + Q +Y A +
Sbjct: 470 AQLLSQQGAYKRASQALTAILNKRTATSAQLQIARYLLGYSQIKQKQYSAATQTLSILLQ 529
Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML-----QYMSRIVERYTNSPYVKG 177
+ + + M R + + + K
Sbjct: 530 EGTLDNTLQADVHARLGDAHYMQGHYTPAVRYYEEAYRIAPDNQVYALYMLSDIEGLKKD 589
Query: 178 ARFYVTVGRNQLAAK---------EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
+ + +A + GR G++ AI F + Y +E+ +
Sbjct: 590 YKAQIAALDKLIARHPNSLYKPRAMYDQGRAMELYGQHAEAIGTFTRLTQEYPQSEYGRK 649
Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
A +L Y + A E + PQ A+ +K
Sbjct: 650 AALQLALLYYNRNETNRAIETYKALLAEAPQSGEAKQAYEALK 692
>gi|90417118|ref|ZP_01225046.1| hypothetical protein GB2207_00415 [marine gamma proteobacterium
HTCC2207]
gi|90331134|gb|EAS46390.1| hypothetical protein GB2207_00415 [marine gamma proteobacterium
HTCC2207]
Length = 299
Score = 47.5 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 16/70 (22%), Positives = 31/70 (44%)
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
A + LK + AA F+ + +Y + + A L E Y+ + AR+
Sbjct: 180 AQNYAQASNLLLKERDINAAAQAFKQHVIDYPASPYTANAHYWLGEIYLLQGQDEMARQA 239
Query: 250 VSLIQERYPQ 259
+L+ E++P+
Sbjct: 240 FTLVVEQHPK 249
>gi|119775219|ref|YP_927959.1| hypothetical protein Sama_2084 [Shewanella amazonensis SB2B]
gi|119767719|gb|ABM00290.1| conserved hypothetical protein [Shewanella amazonensis SB2B]
Length = 254
Score = 47.5 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ LK +Y AI F+ + Y + + + A L + +DEAR ++
Sbjct: 137 YEQAINLVLKERKYDEAIAAFRSFVKKYPGSNYTDNANYWLGQLLYNKNELDEARGAFTV 196
Query: 253 IQERYPQGYWARYVETLVK 271
+ E+YP ++ ++LVK
Sbjct: 197 VVEKYPDS--SKRGDSLVK 213
>gi|146298608|ref|YP_001193199.1| TPR repeat-containing protein [Flavobacterium johnsoniae UW101]
gi|146153026|gb|ABQ03880.1| TPR repeat-containing protein [Flavobacterium johnsoniae UW101]
Length = 593
Score = 47.5 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 31/231 (13%), Positives = 85/231 (36%), Gaps = 3/231 (1%)
Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
+ + ++ + E A + L E+ +++A Y++Q D ++ ++ L
Sbjct: 354 AKTVVKKALTLNLNAYQQADAKMELADILLLEEKYNQALIYYSQIQLDLKNDVMSHEASL 413
Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
+A Y G ++ A +E + + D + Y + ++ +
Sbjct: 414 KAAKTSYYKGDFEWALKQFKELKSANTQLIANDALEYFLLINDNTAADSTQTALKEF--A 471
Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
+ + G+ A + +G+ Y + ++ +A+ ++Q ++
Sbjct: 472 KGDFLLYQNKKPEAITQFQNILKNFKGQEIEAVTLLRLGKIYESQKDFASALSQYQQIID 531
Query: 219 NYSDAEHAEEAMARLVEAY-VALALMDEAREVVSLIQERYPQGYWARYVET 268
N+SD + +EA+ E Y L +++A+ + + + +
Sbjct: 532 NHSDGIYVDEALFFSAEIYNDELKDVEKAKPLYEKVIFNHQDSIYFVDARK 582
>gi|78224725|ref|YP_386472.1| TPR repeat-containing protein [Geobacter metallireducens GS-15]
gi|78195980|gb|ABB33747.1| TPR repeat protein [Geobacter metallireducens GS-15]
Length = 271
Score = 47.5 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 39/94 (41%), Gaps = 1/94 (1%)
Query: 179 RFYVTVGRNQLAAKEVEIG-RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
RF +++LA Y +Y AI FQ V+ N+ E AM + A+
Sbjct: 175 RFLEQHPKHELAVNAHYWSGEAYYGEKKYEQAILEFQEVIKNFPGKEKVPAAMLKQAGAF 234
Query: 238 VALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+ + AR V+ + + +P AR + +K
Sbjct: 235 NEIGDVKSARYVLRKLIDEHPSTEEARRAKERLK 268
Score = 44.4 bits (102), Expect = 0.016, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 35/95 (36%)
Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99
+ + + + +Y+K + + NF+ A E F + P +A +
Sbjct: 133 KVTDMETAQAKPPEPATPEALYQKGLDAYRSGNFAAARESFARFLEQHPKHELAVNAHYW 192
Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
S Y KY+QA +E I +P + V
Sbjct: 193 SGEAYYGEKKYEQAILEFQEVIKNFPGKEKVPAAM 227
>gi|325923405|ref|ZP_08185070.1| tol-pal system protein YbgF [Xanthomonas gardneri ATCC 19865]
gi|325546120|gb|EGD17309.1| tol-pal system protein YbgF [Xanthomonas gardneri ATCC 19865]
Length = 274
Score = 47.5 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 20/117 (17%), Positives = 41/117 (35%), Gaps = 14/117 (11%)
Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
Q +E Y N Y A +++ G Y + A +F+
Sbjct: 163 YDDASQLFLSFLELYPNGVYTPNALYWL--------------GESYYATRNFQLAEAQFR 208
Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
++ Y + A + +L + DEA++ + + +YP AR + ++
Sbjct: 209 DLVGRYPTHDKAAGGLLKLGLSQYGEGKNDEAQQTLQQVVSQYPGSDAARVAQERLQ 265
Score = 45.9 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 18/70 (25%), Positives = 26/70 (37%), Gaps = 2/70 (2%)
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
K G+Y A F L Y + + A+ L E+Y A A + RYP
Sbjct: 159 KNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVGRYPTHD 218
Query: 262 WARYVETLVK 271
+ L+K
Sbjct: 219 --KAAGGLLK 226
Score = 39.8 bits (90), Expect = 0.43, Method: Composition-based stats.
Identities = 15/76 (19%), Positives = 26/76 (34%)
Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
T +R Y A LK + A + F +P +L Y+ +Q
Sbjct: 142 TASNEERTAYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQ 201
Query: 112 QAASLGEEYITQYPES 127
A + + + +YP
Sbjct: 202 LAEAQFRDLVGRYPTH 217
>gi|213161789|ref|ZP_03347499.1| hypothetical protein Salmoneentericaenterica_18034 [Salmonella
enterica subsp. enterica serovar Typhi str. E00-7866]
Length = 152
Score = 47.5 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 23/74 (31%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ AI FQ + Y D+ + A L + D+A +
Sbjct: 35 YNAAIALVQDKSRQDDAIVAFQNFIKKYPDSTYQPNANYWLGQLNYNKGKKDDAAYYFAS 94
Query: 253 IQERYPQGYWARYV 266
+ + YP+ A
Sbjct: 95 VVKNYPKSPKAADA 108
Score = 47.1 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 19/121 (15%), Positives = 41/121 (33%), Gaps = 14/121 (11%)
Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
D+ + +++Y +S Y A +++ K+ A
Sbjct: 43 QDKSRQDDAIVAFQNFIKKYPDSTYQPNANYWLGQLNYNKGKKD--------------DA 88
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
F V+ NY + A +AM ++ +A+ V + +YP A+ +
Sbjct: 89 AYYFASVVKNYPKSPKAADAMYKVGVIMQDKGDTAKAKAVYQQVINKYPGTDGAKQAQKR 148
Query: 270 V 270
+
Sbjct: 149 L 149
>gi|197118152|ref|YP_002138579.1| TPR domain-containing protein [Geobacter bemidjiensis Bem]
gi|197087512|gb|ACH38783.1| TPR domain lipoprotein [Geobacter bemidjiensis Bem]
Length = 882
Score = 47.5 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 26/264 (9%), Positives = 65/264 (24%), Gaps = 27/264 (10%)
Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLD--------------------SVTDVRYQ 57
+ KF L + + G ++ +Y + D Y
Sbjct: 1 MMKKFCLVLVILLT---CAGCSSKTKESLYNEGKQQLEASNPGAAVVFFKNALEKDGNYL 57
Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQQAAS 115
++ A + +A + F + P L +A + + G
Sbjct: 58 EARFQLAKAYAALGKNEQAEKEFTKVLTQNPTRDEVLLELAKLNNASGKGAQGFSYATQY 117
Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
L + A+ ++ + ++ T
Sbjct: 118 LAKHPGAVDGLEAAGISCLVSKKHQEAREYFTQALKVDPSRSATKLELASLDMATGDTER 177
Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
A + Q K + + + + + A+ +L
Sbjct: 178 AKALLNEVILAEQKNFKALYMLAAIENNSGHGDKAAVLYQKILQLDQNQVL--ALYKLGL 235
Query: 236 AYVALALMDEAREVVSLIQERYPQ 259
Y+ +D+A + + + +P+
Sbjct: 236 LYLERGEVDKADQRADQMIKAFPK 259
>gi|94987535|ref|YP_595468.1| Outer membrane protein and related peptidoglycan-associated
(lipo)proteins [Lawsonia intracellularis PHE/MN1-00]
gi|94731784|emb|CAJ55147.1| Outer membrane protein and related peptidoglycan-associated
(lipo)proteins [Lawsonia intracellularis PHE/MN1-00]
Length = 1076
Score = 47.5 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 25/205 (12%), Positives = 61/205 (29%)
Query: 66 LFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP 125
+++ + + ++ + + P + + ++ +
Sbjct: 379 KLMQQPETRDSLQPLSKTNEEKPVSEPVVVYVDEKGNPVGKPPDTTAIIEEAKKNMRAGQ 438
Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
K D + L G + Q + + Y R +E Y +
Sbjct: 439 VQKAKDLLATLKGHALVQEQHEEVLYLFSELNEKIYKDRWIEGYEPIITSTNKAMNFNLR 498
Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
++A + +G L+ G A F + + +E EA L + + +
Sbjct: 499 SPRVAEALMRLGMVNLRIGNQDEAAGYFGALRRKFPQSEFIPEAYLALGKDQFSKGEYAD 558
Query: 246 AREVVSLIQERYPQGYWARYVETLV 270
A + LI + YP+ + +
Sbjct: 559 AVKTFQLILDNYPESKAVQDASRFM 583
Score = 45.6 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 24/207 (11%), Positives = 61/207 (29%), Gaps = 7/207 (3%)
Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
A K+ ++S+A DF R L +++ Y + L +
Sbjct: 584 AEALFKQGHYSRAL-----ILVDFVDRRWPRLYLEDPNYLKMVGDLYSRENRLDDALKAY 638
Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
+ V + +++++ S A +
Sbjct: 639 WTYYNLVPEAKDSHDTLFKIGTSYFKKGLMQGGK--DVFEELLKKFPKSDSAPKALLALG 696
Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243
+ ++ + ++ +L Y ++ A++A RL + +
Sbjct: 697 EEQVIKENPTIQELVTIFENPSSTIPEIYYKKILDEYPNSPEAQQAAIRLAAWKLWHRDI 756
Query: 244 DEAREVVSLIQERYPQGYWARYVETLV 270
A + ++YP+ +A E ++
Sbjct: 757 PTAMTMAQQFLDKYPESPYAPRAEEII 783
Score = 42.5 bits (97), Expect = 0.058, Method: Composition-based stats.
Identities = 31/234 (13%), Positives = 63/234 (26%), Gaps = 35/234 (14%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
+ ++ A + F ++P + + + A + G Y
Sbjct: 534 PQSEFIPEAYLALGKDQFSKGEYADAVKTFQLILDNYPESKAVQDASRFMAEALFKQGHY 593
Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
+A L + ++P D +Y +M+ D+ + L+
Sbjct: 594 SRALILVDFVDRRWPRLYLED-------PNYLKMVGDLYSRENRLDDALKAYWTYYNLVP 646
Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
+ F IG Y K+G F+ +L + ++ A +A+
Sbjct: 647 EAKDSHDTLFK--------------IGTSYFKKGLMQGGKDVFEELLKKFPKSDSAPKAL 692
Query: 231 ARLVEAYVALALMDEARE--------------VVSLIQERYPQGYWARYVETLV 270
L E V I + YP A+ +
Sbjct: 693 LALGEEQVIKENPTIQELVTIFENPSSTIPEIYYKKILDEYPNSPEAQQAAIRL 746
Score = 40.5 bits (92), Expect = 0.22, Method: Composition-based stats.
Identities = 33/210 (15%), Positives = 72/210 (34%), Gaps = 21/210 (10%)
Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
+ ++ L+ N +A YF R FP + ++ L Q+S G+Y A
Sbjct: 503 AEALMRLGMVNLRIGNQDEAAGYFGALRRKFPQSEFIPEAYLALGKDQFSKGEYADAVKT 562
Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
+ + YPESK V + + + + V+R Y++
Sbjct: 563 FQLILDNYPESKAVQDASRFMAEALFKQGHYSRAL---------ILVDFVDRRWPRLYLE 613
Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
+ +G Y + A+ + +A+ + + + ++ +
Sbjct: 614 DPNYLKM------------VGDLYSRENRLDDALKAYWTYYNLVPEAKDSHDTLFKIGTS 661
Query: 237 YVALALMDEAREVVSLIQERYPQGYWARYV 266
Y LM ++V + +++P+ A
Sbjct: 662 YFKKGLMQGGKDVFEELLKKFPKSDSAPKA 691
Score = 35.5 bits (79), Expect = 7.7, Method: Composition-based stats.
Identities = 30/225 (13%), Positives = 66/225 (29%), Gaps = 12/225 (5%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
+++ + K+ + F + + FP + A K+LL Q
Sbjct: 646 PEAKDSHDTLFKIGTSYFKKGLMQGGKDVFEELLKKFPKSDSAPKALLALGEEQVIKENP 705
Query: 111 QQAASLGEE------YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
+ Y + +Y A + R + +
Sbjct: 706 TIQELVTIFENPSSTIPEIYYKKILDEYPNSPEAQQAAIRLAAWKLWHRDIPTAMTMAQQ 765
Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
+++Y SPY A + G +Q + ++ ++ + Y D
Sbjct: 766 FLDKYPESPYAPRAEEIIARGFDQS----FALALQEENYERILSLWEKYPYLQIAYKD-- 819
Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
+E L AY+ ++ ++++ E + YV L
Sbjct: 820 MTDELRVALARAYLNRGDEEKGMDLLNQFLESPQDPNYGDYVYNL 864
>gi|157369524|ref|YP_001477513.1| tol-pal system protein YbgF [Serratia proteamaculans 568]
gi|157321288|gb|ABV40385.1| Tol-Pal system YbgF [Serratia proteamaculans 568]
Length = 266
Score = 47.5 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 20/120 (16%), Positives = 46/120 (38%), Gaps = 14/120 (11%)
Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
+++ + V++Y S Y A +++ K+ A
Sbjct: 159 EKKQYDQAISAFQSFVKQYPKSTYQPNANYWLGQLFYNKGKKD--------------DAA 204
Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
+ +V+ NY+ + A +AM ++ D+A+ V + ++YP A+ ++ V
Sbjct: 205 YYYAVVVKNYAKSPKAPDAMYKVGIIMQEKGQADKAKAVFQQVIKQYPTSAAAKQAKSRV 264
>gi|152987540|ref|YP_001349883.1| TPR repeat-containing protein [Pseudomonas aeruginosa PA7]
gi|150962698|gb|ABR84723.1| TPR repeat [Pseudomonas aeruginosa PA7]
Length = 274
Score = 47.5 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 21/119 (17%), Positives = 48/119 (40%), Gaps = 14/119 (11%)
Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
+ Q + + +Y NS Y A++++ G L +G+ A
Sbjct: 167 KDFDKASQAFTAFLRKYPNSQYSGNAQYWL--------------GEVNLAKGDLQGAGQA 212
Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
F V +Y ++ +++ +L + L D+A+ ++ + +YP A+ + +K
Sbjct: 213 FARVSQSYPSSQKVPDSLYKLADVERRLGNNDKAKGILQQVISQYPGTSAAQLSQRDLK 271
Score = 40.5 bits (92), Expect = 0.22, Method: Composition-based stats.
Identities = 12/69 (17%), Positives = 27/69 (39%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ +K ++ A F L Y +++++ A L E +A + A + +
Sbjct: 156 YYDAAFDLIKSKDFDKASQAFTAFLRKYPNSQYSGNAQYWLGEVNLAKGDLQGAGQAFAR 215
Query: 253 IQERYPQGY 261
+ + YP
Sbjct: 216 VSQSYPSSQ 224
Score = 38.6 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 21/122 (17%), Positives = 40/122 (32%), Gaps = 8/122 (6%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
D ++ Y+ A +K ++F KA + F R +P + + + V + G
Sbjct: 146 EPGDPAKEKLYYDAAFDLIKSKDFDKASQAFTAFLRKYPNSQYSGNAQYWLGEVNLAKGD 205
Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
Q A YP S+ V + DV + +++ +Y
Sbjct: 206 LQGAGQAFARVSQSYPSSQKVPDS--------LYKLADVERRLGNNDKAKGILQQVISQY 257
Query: 170 TN 171
Sbjct: 258 PG 259
>gi|78224418|ref|YP_386165.1| hypothetical protein Gmet_3227 [Geobacter metallireducens GS-15]
gi|78195673|gb|ABB33440.1| conserved hypothetical protein [Geobacter metallireducens GS-15]
Length = 996
Score = 47.5 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 16/65 (24%), Positives = 25/65 (38%)
Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
G ++ +Y AI R + VL Y D + A+ L A +A +S +
Sbjct: 43 GFNAYQKKDYQTAIERMKTVLEKYPDTPLRDMAIFWLARANFKAGFERDAARYMSQFMKE 102
Query: 257 YPQGY 261
YP
Sbjct: 103 YPDSP 107
>gi|311694924|gb|ADP97797.1| secreted protein containing Tol-Pal system, YbgF domain [marine
bacterium HP15]
Length = 248
Score = 47.5 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 17/129 (13%), Positives = 42/129 (32%), Gaps = 3/129 (2%)
Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ---LAAKEVEIGRYYLK 202
R+ + + + ++ + + +G YL
Sbjct: 116 REYRQPDAEERKAYEQIQDLIRNQKKYDDAISRIYEFIDEYPEGDLTVNAYYWLGEVYLV 175
Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
+ + A F +V ++D A +A+ +L + L ++AR + + + YP
Sbjct: 176 KPQLEQAKQAFTIVATRFADHRKAPDAVYKLGVTHDRLGEKEQARRSMQTVIDDYPSSSA 235
Query: 263 ARYVETLVK 271
A ++
Sbjct: 236 ADLARKFLE 244
>gi|242280445|ref|YP_002992574.1| hypothetical protein Desal_2983 [Desulfovibrio salexigens DSM 2638]
gi|242123339|gb|ACS81035.1| Tetratricopeptide domain protein [Desulfovibrio salexigens DSM
2638]
Length = 1117
Score = 47.5 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 31/196 (15%), Positives = 63/196 (32%), Gaps = 15/196 (7%)
Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
A L E A + F + S + + + + +++A + I
Sbjct: 470 AAEGALDEGEIQVAIDGFTEVSLMKEL-PLDMRLRALYGKAEGLTELHREAMADNFGEIA 528
Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
+ + Y + + +Y N P + +
Sbjct: 529 SAWMEAMNADTKSPNVPMALLNLGLLNLKVGNMPEAKAYFNLLKSQYPNDPNIPYISY-- 586
Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242
G YYL EY A +FQ ++ Y D++ +A L ++ AL
Sbjct: 587 ------------YWGEYYLGMKEYEKAADQFQYLVQMYPDSKIVRDAALGLAKSLDALGY 634
Query: 243 MDEAREVVSLIQERYP 258
++A +++ I +R+P
Sbjct: 635 DEQAFQIIDYIDKRWP 650
Score = 45.2 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 34/241 (14%), Positives = 75/241 (31%), Gaps = 22/241 (9%)
Query: 43 SRDVYLDSVTDVRYQREVYEKAVLFLK------EQNFSKAYEYFNQCSRDFPFAGVARKS 96
+ + + R +Y KA + NF + + + + +
Sbjct: 488 TEVSLMKELPLDMRLRALYGKAEGLTELHREAMADNFGEIASAWMEAMNADTKSPNVPMA 547
Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY---------AQMIRD 147
LL + G +A + +QYP N+ Y+ Y G Y A +
Sbjct: 548 LLNLGLLNLKVGNMPEAKAYFNLLKSQYPNDPNIPYISYYWGEYYLGMKEYEKAADQFQY 607
Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
+ +K++ + + Y + A + + +E + L
Sbjct: 608 LVQMYPDSKIVRDAALGLAKSLDALGYDEQAFQIIDYIDKRWPRFYIEDLNFLLMSANTQ 667
Query: 208 AAIPRFQLVLANY-------SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
+ + + NY +A A+ +AR+ + Y+ A+E+ + +P
Sbjct: 668 NRLGKIEQARENYWAYYNLAPEAPEADIVLARIGDIYLKTGQKTAAKEIYEKAAKDFPDK 727
Query: 261 Y 261
Sbjct: 728 E 728
Score = 44.0 bits (101), Expect = 0.025, Method: Composition-based stats.
Identities = 14/91 (15%), Positives = 28/91 (30%)
Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
+ + +G LK G A F L+ + Y + + E
Sbjct: 531 WMEAMNADTKSPNVPMALLNLGLLNLKVGNMPEAKAYFNLLKSQYPNDPNIPYISYYWGE 590
Query: 236 AYVALALMDEAREVVSLIQERYPQGYWARYV 266
Y+ + ++A + + + YP R
Sbjct: 591 YYLGMKEYEKAADQFQYLVQMYPDSKIVRDA 621
Score = 38.2 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 32/248 (12%), Positives = 67/248 (27%), Gaps = 29/248 (11%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
D Y +L + + KA + F + +P + + R + L A + G
Sbjct: 576 PNDPNIPYISYYWGEYYLGMKEYEKAADQFQYLVQMYPDSKIVRDAALGLAKSLDALGYD 635
Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKLMLQ 160
+QA + + ++P D + L+ +
Sbjct: 636 EQAFQIIDYIDKRWPRFYIEDLNFLLMSANTQNRLGKIEQARENYWAYYNLAPEAPEADI 695
Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY-------------------L 201
++RI + Y + A+ KE +
Sbjct: 696 VLARIGDIYLKTGQKTAAKEIYEKAAKDFPDKEGGLVSMMRLAEEGIYDDPSMSQMDKVF 755
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
R + + ++ + D+ A A +L Y + V ++YP+
Sbjct: 756 DRPYNLRPQKIYTHIIEKFPDSPLAPLAQLKLGMWYYWNKKYGDCLGAVQGFLDKYPRSG 815
Query: 262 WARYVETL 269
L
Sbjct: 816 LRDRASEL 823
>gi|88705613|ref|ZP_01103323.1| conserved hypothetical protein, secreted [Congregibacter litoralis
KT71]
gi|88700126|gb|EAQ97235.1| conserved hypothetical protein, secreted [Congregibacter litoralis
KT71]
Length = 304
Score = 47.5 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 18/118 (15%), Positives = 38/118 (32%), Gaps = 12/118 (10%)
Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
+ + + +ERY + A +++ + A+
Sbjct: 195 QEFDQAVSAFNAFLERYPAGRFAPNAHYWLGELYL------------VTDPVDPEASRQA 242
Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
F L+L Y +A+ +L + D +RE ++ + YP AR +
Sbjct: 243 FMLLLNQYPTNAKIPDALYKLGRVHFMKGNRDRSREFLNRVIREYPDSSAARLAGDFL 300
>gi|194335029|ref|YP_002016889.1| TPR repeat-containing protein [Prosthecochloris aestuarii DSM 271]
gi|194312847|gb|ACF47242.1| Tetratricopeptide TPR_2 repeat protein [Prosthecochloris aestuarii
DSM 271]
Length = 301
Score = 47.1 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 26/209 (12%), Positives = 65/209 (31%), Gaps = 3/209 (1%)
Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS--AGKYQQ 112
++ A + + + + A E + + P + A ++ M A +
Sbjct: 75 MEDDVLFSLADSYYQSEQYLLAIEIYKRLLEQTPGSLYAPEAQFMLAKSHMELSPDYARD 134
Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI-VERYTN 171
+ ++ + + + +
Sbjct: 135 QEHTRKAIREFQLYLDLYPQRQEASDLADDIEVLKGLIQLNPDNAAYRSKLALALSESER 194
Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231
++ ++ + + R +LA I Y+K +Y AA ++ +L Y D + E+A
Sbjct: 195 LGRIQESQKNIALLREKLAENTFAIAERYVKLDQYRAAEVFYEDILRFYPDTPYFEKAWT 254
Query: 232 RLVEAYVALALMDEAREVVSLIQERYPQG 260
+ A + EAR + ++P+
Sbjct: 255 GKIMALIKRGKWFEARAALEAYDRQFPEN 283
Score = 44.4 bits (102), Expect = 0.019, Method: Composition-based stats.
Identities = 30/210 (14%), Positives = 65/210 (30%), Gaps = 5/210 (2%)
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
Y A ++++ + +A + L A Y + +Y A + +
Sbjct: 44 YSYARQLVEKEKYDRAIIELESLMFASRATTMEDDVLFSLADSYYQSEQYLLAIEIYKRL 103
Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
+ Q P S +++ S+ ++ D DQ T+ ++ ++ Y
Sbjct: 104 LEQTPGSLYAPEAQFMLAKSHMELSPDYARDQEHTRKAIREFQLYLDLYPQRQEASDLAD 163
Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM----ARLVEA 236
+ V + + + Y K ++ R + + + E + + E
Sbjct: 164 DIEVLKGLIQLNP-DNAAYRSKLALALSESERLGRIQESQKNIALLREKLAENTFAIAER 222
Query: 237 YVALALMDEAREVVSLIQERYPQGYWARYV 266
YV L A I YP +
Sbjct: 223 YVKLDQYRAAEVFYEDILRFYPDTPYFEKA 252
>gi|333029576|ref|ZP_08457637.1| Tetratricopeptide TPR_2 repeat-containing protein [Bacteroides
coprosuis DSM 18011]
gi|332740173|gb|EGJ70655.1| Tetratricopeptide TPR_2 repeat-containing protein [Bacteroides
coprosuis DSM 18011]
Length = 1006
Score = 47.1 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 33/226 (14%), Positives = 69/226 (30%), Gaps = 22/226 (9%)
Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
S + Y Y + ++NFS+A +F++ ++ + +
Sbjct: 498 TLTKSKSGETYALAHYNLGYIAFNQKNFSEAENWFSKYTQLETGDNREALADAFNRRGDC 557
Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
+ G + DY Y + + ++L +Y
Sbjct: 558 YLHSRAFIQAKGNYTRALNTSASVGDYSIYQMALVAGLQKNYSEKINLLSRLANEY---- 613
Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
+A E GR ++++ AI FQ ++ Y +
Sbjct: 614 ------------------PESPYVAQGWYEKGRSFVQQQNNSEAIRSFQQLIQKYPENPI 655
Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+ +A A + Y +EA + + ++YP AR +K
Sbjct: 656 SRKAAAEVGLLYYQDGNYNEAIKTYKWVVQKYPGSDEARMAMRDLK 701
Score = 39.0 bits (88), Expect = 0.69, Method: Composition-based stats.
Identities = 23/228 (10%), Positives = 60/228 (26%), Gaps = 9/228 (3%)
Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAY---EYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
T + ++++ ++++F+ A + F A L +SA+
Sbjct: 26 TAITSPDRLFKEGKALFQKESFAAAIPSLKAFVASKPSASLVQEANFMLAVSAYQLKDKN 85
Query: 109 KYQQAASLGEEYITQYPESKNVD--YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
+ + +Y + Y Y + +
Sbjct: 86 RVKILEEYLNDYPDSPHANYINGLLGSSYYFNEQYEYALAYFNSVDLDYLSNENREDVMY 145
Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY----SD 222
+ T+ V V ++ L + +D
Sbjct: 146 RQATSYLKVDKLNDAVAWFETLRVTSTKYEKDSQYYISYIRYTQGKYDEALKGFLALQAD 205
Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
++ E + +Y D+A+ V +YP ++ + ++
Sbjct: 206 EKYGELVPYYIASSYFIKGHYDKAQIVAEGYLSQYPNHKYSAEMYRIL 253
Score = 38.6 bits (87), Expect = 0.82, Method: Composition-based stats.
Identities = 22/231 (9%), Positives = 53/231 (22%), Gaps = 18/231 (7%)
Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS------------- 100
Q+ +++ V F++A EYF+ + R
Sbjct: 429 EAKQKLLFQMGVQSFANSEFNEAIEYFSNSLVLGQYNPQTRAEAAYWRGESYYRLDKVAE 488
Query: 101 ----AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
+ K + + + + N + ++ A
Sbjct: 489 ASRNFKDYLTLTKSKSGETYALAHYNLGYIAFNQKNFSEAENWFSKYTQLETGDNREALA 548
Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK-RGEYVAAIPRFQL 215
KG + + + Y I
Sbjct: 549 DAFNRRGDCYLHSRAFIQAKGNYTRALNTSASVGDYSIYQMALVAGLQKNYSEKINLLSR 608
Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
+ Y ++ + + ++V EA + ++YP+ +R
Sbjct: 609 LANEYPESPYVAQGWYEKGRSFVQQQNNSEAIRSFQQLIQKYPENPISRKA 659
Score = 38.2 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 31/221 (14%), Positives = 67/221 (30%), Gaps = 15/221 (6%)
Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
+ + YEK F+++QN S+A F Q + +P ++RK+ + Y G
Sbjct: 612 EYPESPYVAQGWYEKGRSFVQQQNNSEAIRSFQQLIQKYPENPISRKAAAEVGLLYYQDG 671
Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR---------------DVPYDQR 153
Y +A + + +YP S + Y + R + ++
Sbjct: 672 NYNEAIKTYKWVVQKYPGSDEARMAMRDLKSLYVDLNRVDEYATLAESMPGGIRMEVTEQ 731
Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213
+ + + + R+ + + +
Sbjct: 732 DSLTYIAAEKIYLRGMNSEAKNSFERYLDKYPAGAFSLNAHYYLSVIAGKQGQNEDVITH 791
Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
L +Y D + EEA+ E E+ + ++
Sbjct: 792 TSKLLSYPDNPYYEEALIMRSELAYKQGNYTESLDFYKKLK 832
Score = 35.9 bits (80), Expect = 5.3, Method: Composition-based stats.
Identities = 23/226 (10%), Positives = 63/226 (27%), Gaps = 17/226 (7%)
Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
+Y+ A++ ++N+S+ ++ + ++P + + +A
Sbjct: 583 DYSIYQMALVAGLQKNYSEKINLLSRLANEYPESPYVAQGWYEKGRSFVQQQNNSEAIRS 642
Query: 117 GEEYITQYPESK------------NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
++ I +YPE+ Y + + + ++ ++ +
Sbjct: 643 FQQLIQKYPENPISRKAAAEVGLLYYQDGNYNEAIKTYKWVVQKYPGSDEARMAMRDLKS 702
Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK----RGEYVAAIPRFQLVLANY 220
+ + G ++ + + RG A F+ L Y
Sbjct: 703 LYVDLNRVDEYATLAESMPGGIRMEVTEQDSLTYIAAEKIYLRGMNSEAKNSFERYLDKY 762
Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
+ A L ++ S + YP +
Sbjct: 763 PAGAFSLNAHYYLSVIAGKQGQNEDVITHTSKLLS-YPDNPYYEEA 807
>gi|289548649|ref|YP_003473637.1| hypothetical protein Thal_0878 [Thermocrinis albus DSM 14484]
gi|289182266|gb|ADC89510.1| Tetratricopeptide TPR_2 repeat protein [Thermocrinis albus DSM
14484]
Length = 850
Score = 47.1 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 28/217 (12%), Positives = 61/217 (28%), Gaps = 12/217 (5%)
Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
++ + + +K ++ + ++ + LL+ A +
Sbjct: 348 DLEKASYSLMKMGDYE---KVYDTLLEHQRELDADQYKLLLEAAYWAGKPMEPLLEYADK 404
Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
++ E + D Q + D Y A M Y I +
Sbjct: 405 KFPQLAREYRGWDLFRQRRWKESLQYLDDPYYRALAYFNMKNYKEVITTLEKDDRLQARL 464
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY---------SDAEHAEEA 229
AK R Y+ + F N + +A
Sbjct: 465 LKAEAYLLLGNPAKARSYLTPQTDRELYLLGLSYFMEEDYNKAVEFFSRVPESSPLRPQA 524
Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
+ ++ +A+ + + +A+E + E YP +AR
Sbjct: 525 LLKMGDAFYNMGDLSKAQETYRKVIEEYPDTPYARQA 561
Score = 37.5 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 25/197 (12%), Positives = 62/197 (31%), Gaps = 8/197 (4%)
Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
+ RE+Y + + E++++KA E+F++ P A + + + K Q+
Sbjct: 485 PQTDRELYLLGLSYFMEEDYNKAVEFFSRVPESSPLRPQALLKMGDAFYNMGDLSKAQET 544
Query: 114 ASLGEE------YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
E Y Q + + ++I D + ++ +
Sbjct: 545 YRKVIEEYPDTPYARQATLALLEAKPTNMNIEQETKLIEDYLKKDPDSPTAQHLKLQLAK 604
Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
Y + A+ + + ++ + +++ A+
Sbjct: 605 LYIQQNRLSDAQRLLLDLVGTPVESRALLLLADIEPDVKKRLVLLYKVYKEGPPTD--AQ 662
Query: 228 EAMARLVEAYVALALMD 244
A +L++ Y L D
Sbjct: 663 LARQKLIDTYQKLGDKD 679
>gi|227356661|ref|ZP_03841047.1| YbgF protein [Proteus mirabilis ATCC 29906]
gi|227163169|gb|EEI48100.1| YbgF protein [Proteus mirabilis ATCC 29906]
Length = 247
Score = 47.1 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 18/120 (15%), Positives = 43/120 (35%), Gaps = 14/120 (11%)
Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
+ + + ++ ++ Y S Y A+F++ K+
Sbjct: 139 NSKDYDKAIVALNNFIKSYPKSSYQSNAQFWLGQMYYLKGNKDQAAST------------ 186
Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
F +V+ NY ++ A EA ++ D A+ + + ++YP A+ + +
Sbjct: 187 --FAIVVKNYPKSQKASEAFYKIGLIMQEKGQKDNAKAIYQQVVKQYPNSAGAKLAQKQL 244
Score = 46.7 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 13/75 (17%), Positives = 25/75 (33%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
L +Y AI + +Y + + A L + Y D+A ++
Sbjct: 130 YNAAIDIVLNSKDYDKAIVALNNFIKSYPKSSYQSNAQFWLGQMYYLKGNKDQAASTFAI 189
Query: 253 IQERYPQGYWARYVE 267
+ + YP+ A
Sbjct: 190 VVKNYPKSQKASEAF 204
>gi|308186085|ref|YP_003930216.1| hypothetical protein Pvag_0562 [Pantoea vagans C9-1]
gi|308056595|gb|ADO08767.1| Uncharacterized protein precursor [Pantoea vagans C9-1]
Length = 264
Score = 47.1 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 29/70 (41%), Gaps = 2/70 (2%)
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
++ +Y AI Q + Y D+ + A L + D+A + + + YP+
Sbjct: 156 EKKQYDQAISALQAWVKRYPDSTYQPNANYWLGQLNYNKGKKDDAAYYYATVVKNYPKSP 215
Query: 262 WARYVETLVK 271
+ E L+K
Sbjct: 216 --KAAEALLK 223
Score = 43.6 bits (100), Expect = 0.025, Method: Composition-based stats.
Identities = 19/120 (15%), Positives = 43/120 (35%), Gaps = 14/120 (11%)
Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
+++ + + V+RY +S Y A +++ K+ A
Sbjct: 156 EKKQYDQAISALQAWVKRYPDSTYQPNANYWLGQLNYNKGKKD--------------DAA 201
Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
+ V+ NY + A EA+ ++ +A+ V + + YP A+ + +
Sbjct: 202 YYYATVVKNYPKSPKAAEALLKVGVIMQEKKDTAKAKAVFQQVIKLYPDTESAKQAQKRL 261
>gi|332705272|ref|ZP_08425353.1| TPR repeat-containing protein [Lyngbya majuscula 3L]
gi|332356015|gb|EGJ35474.1| TPR repeat-containing protein [Lyngbya majuscula 3L]
Length = 346
Score = 47.1 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 29/239 (12%), Positives = 67/239 (28%), Gaps = 11/239 (4%)
Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99
+ E Y + V L N+ +A F Q + P+ +L
Sbjct: 110 KDPFNTELPVRTIPRMSAVEFYNRGVDQLDNGNYPEAMANFKQALQLEPYDPDINYNLGY 169
Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
+ Q A + Y + + D +
Sbjct: 170 ----VHHIQGNYQEAIDNYTAAIKIKTDYGEAYSNRGYAYFVQKKFIEAIADFSKAIALT 225
Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219
+ N+ F ++ + + Y +RG + + ++Q +A+
Sbjct: 226 PDNDTVYLSRGNAYSEVDNYFQAIADYDRALSINPKNAMAYYQRGLTRSKLKQYQAAVAD 285
Query: 220 YSDAEHAE----EAMARLVEAYVALALMDEAREVVSLIQERYPQ---GYWARYVETLVK 271
Y++ E +A + A + L ++EA + + + + + +K
Sbjct: 286 YTETLKIEPTFADAFYKRGLARLDLNKVEEAIQDFKKAADLFQEQGRTENYQEAMEAIK 344
>gi|326802361|ref|YP_004320180.1| Tetratricopeptide TPR_1 repeat-containing protein [Sphingobacterium
sp. 21]
gi|326553125|gb|ADZ81510.1| Tetratricopeptide TPR_1 repeat-containing protein [Sphingobacterium
sp. 21]
Length = 845
Score = 47.1 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 29/211 (13%), Positives = 59/211 (27%), Gaps = 21/211 (9%)
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
Y A + +FS A +YF + + L + + Y
Sbjct: 354 YGLAYAAFRNDSFSIAADYFERFLAVEGSS-------LEENMRHDVIARLGDSYLSLRNY 406
Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
+ + Q + L + ++E++ S Y F
Sbjct: 407 DRANEYYDQLINSKAPNQDYALFQRGIIQGLQGDNEAKLSTLRSVIEQFPGSNYADDVAF 466
Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
E+ Y +Y AAI Q ++ Y + + A+ +
Sbjct: 467 --------------EVPYTYFITEDYDAAIEGLQQMIEQYPRSSYVPRALMTIGLVQYNK 512
Query: 241 ALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+ A+ + E+YP A+ ++
Sbjct: 513 DETEAAKATFQRVVEKYPTTEEAKQALRSIE 543
>gi|319760472|ref|YP_004124410.1| tol-pal system protein YbgF [Candidatus Blochmannia vafer str.
BVAF]
gi|318039186|gb|ADV33736.1| tol-pal system protein YbgF [Candidatus Blochmannia vafer str.
BVAF]
Length = 243
Score = 47.1 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 19/179 (10%), Positives = 59/179 (32%), Gaps = 14/179 (7%)
Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151
+ + ++ + + + E+ + + + ++ + +
Sbjct: 73 CIQDTQHCIQSMRNTNNTIENYEKICEKSRSNTNVINKKQQFLNNIEDADYKLAVSLVLE 132
Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
++ +Q ++ Y S Y A +++ K A
Sbjct: 133 KKQYDRAIQTFQDFIKNYPQSNYQPNAHYWLGQLYYNQNDKN--------------NASY 178
Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
F LV+ NY + A +A+ ++ +D+++ + + + YP A++ + +
Sbjct: 179 HFALVVKNYPKSSKAPDALLKIGIIMQETNQIDKSKTIYKQLGKLYPNSNAAKHAQKQL 237
>gi|319786287|ref|YP_004145762.1| tol-pal system protein YbgF [Pseudoxanthomonas suwonensis 11-1]
gi|317464799|gb|ADV26531.1| tol-pal system protein YbgF [Pseudoxanthomonas suwonensis 11-1]
Length = 268
Score = 47.1 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 27/65 (41%)
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+ LK +Y A+ FQ L Y +A A+ L E+Y A A + +
Sbjct: 146 YDAAFKTLKAADYAASAEAFQGFLDAYPAGVYAPNALYWLGESYYATGNYALAAQQFRAL 205
Query: 254 QERYP 258
ERYP
Sbjct: 206 MERYP 210
Score = 39.8 bits (90), Expect = 0.47, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 32/78 (41%)
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+G Y G Y A +F+ ++ Y + A+ +L + + + +A ++ +
Sbjct: 183 YWLGESYYATGNYALAAQQFRALMERYPTHDKTPGALLKLGLSQLGEGEVRQALSTLAQV 242
Query: 254 QERYPQGYWARYVETLVK 271
+YP AR ++
Sbjct: 243 GSQYPGTDAARIAADRLR 260
>gi|224537598|ref|ZP_03678137.1| hypothetical protein BACCELL_02478 [Bacteroides cellulosilyticus
DSM 14838]
gi|224520795|gb|EEF89900.1| hypothetical protein BACCELL_02478 [Bacteroides cellulosilyticus
DSM 14838]
Length = 1010
Score = 47.1 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 30/233 (12%), Positives = 63/233 (27%), Gaps = 22/233 (9%)
Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
S Y Y A + E++++ A F + ++ +
Sbjct: 499 SNFSEYLNLTPDRNTETYALAYYNLAYIAFHEKDYTLAQNRFLKFTQLEKGENPTALADA 558
Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
+ + + + + DY +Y + + ++
Sbjct: 559 YNRIGDCYLHARRFDEAKQYYTKAENMGTPAGDYSFYQLALVAGLQKDYDGKVALLNRMA 618
Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
+Y E GR Y++ AI F+ +L
Sbjct: 619 NKY----------------------PSSPYTINALYEKGRSYVQTSNSRQAIAAFKELLD 656
Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
Y ++ + +A A + Y D A + + +YP AR +K
Sbjct: 657 KYPESPVSRKAAAEIGLLYYQNDEYDRAIDAYKHVVTQYPGSEEARLAMRDLK 709
Score = 44.4 bits (102), Expect = 0.015, Method: Composition-based stats.
Identities = 22/271 (8%), Positives = 66/271 (24%), Gaps = 29/271 (10%)
Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
K + + ++ L+ + S + +Y++ +++ ++ A
Sbjct: 1 MKNKLSRILCTALCCAPLLATAQTSENIT---------SPQRLYQEGQSLFQQKAYAAAI 51
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
R G +Y A L + ++ +Y
Sbjct: 52 PPLQAFVRQIDAEGKPLPVAGERMEAEYMLVC--AAYELKDLKSLDKLQAYLDEYPDTPY 109
Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA------ 191
++ V + + + + + + + +
Sbjct: 110 ANRIYALMASVYFFEGKYDEAMAMFNSARLDLLGNEERDDMTYRLATCYLKTGNVKEAAI 169
Query: 192 --------KEVEIGRYYLKRGEYVAAIPRFQLVLANY----SDAEHAEEAMARLVEAYVA 239
+ R+ + + +A++ A + E Y+
Sbjct: 170 WFETLRSTSKKYAADCTYYISYIRYTQQRYDEAMTGFLSLQDNAKYKALAPYYIAEIYLI 229
Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETLV 270
D+A V YP + + ++
Sbjct: 230 KKNYDKAEIVAQNYLSAYPNNEYTAEMYRVL 260
Score = 39.0 bits (88), Expect = 0.67, Method: Composition-based stats.
Identities = 37/222 (16%), Positives = 60/222 (27%), Gaps = 11/222 (4%)
Query: 40 RQSSRDVYLDSVTDVRYQREVYE-KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
YLD D Y +Y A ++ E + +A FN D
Sbjct: 93 SLDKLQAYLDEYPDTPYANRIYALMASVYFFEGKYDEAMAMFNSARLDLLGNEERDDMTY 152
Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPES-----KNVDYVYYLVGMSYAQMIRDVPYDQR 153
A G ++AA E + + + Y+ Y M +
Sbjct: 153 RLATCYLKTGNVKEAAIWFETLRSTSKKYAADCTYYISYIRYTQQRYDEAMTGFLSLQDN 212
Query: 154 ATKLMLQYMSRIVERYTNSPYVK-----GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
A L Y K A +G G+Y
Sbjct: 213 AKYKALAPYYIAEIYLIKKNYDKAEIVAQNYLSAYPNNEYTAEMYRVLGDADYHFGKYHE 272
Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
A+ F+ L N +A +A+ L +Y + +A +
Sbjct: 273 AMEAFEKYLENNKEAAPRRDALYMLGLSYYNCGVYSKAANTL 314
Score = 35.5 bits (79), Expect = 7.4, Method: Composition-based stats.
Identities = 32/223 (14%), Positives = 69/223 (30%), Gaps = 15/223 (6%)
Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
+ +YEK +++ N +A F + +P + V+RK+ + Y
Sbjct: 620 KYPSSPYTINALYEKGRSYVQTSNSRQAIAAFKELLDKYPESPVSRKAAAEIGLLYYQND 679
Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSY---------------AQMIRDVPYDQR 153
+Y +A + +TQYP S+ + Y ++
Sbjct: 680 EYDRAIDAYKHVVTQYPGSEEARLAMRDLKSIYVDANRVDEFAALAAKMPGEIRFDASEQ 739
Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213
+ + ++R R+ + + K + AA+
Sbjct: 740 DSLTYIAAEKVYMKREIAPAKSSFTRYLQSFPNGAFSLNAHYYLCVIGKEQKDEAAVLEH 799
Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
L Y D +++EA+ E D+A ++ +
Sbjct: 800 AGKLLEYPDNPYSQEALIARAEILFNRKQFDQALNDYRQLKAK 842
>gi|220933727|ref|YP_002512626.1| hypothetical protein Tgr7_0542 [Thioalkalivibrio sp. HL-EbGR7]
gi|219995037|gb|ACL71639.1| conserved hypothetical protein [Thioalkalivibrio sp. HL-EbGR7]
Length = 922
Score = 47.1 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 19/111 (17%), Positives = 41/111 (36%), Gaps = 1/111 (0%)
Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
+ + R++E S A + R + + V G G A I ++
Sbjct: 47 ERAMDTYERVLEEAPPSEMRAEAMRRLADLRQEHSEGRVAEGD-RPAPGTQTAIIALYEQ 105
Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
L Y D H + + +L AY + +++ ++ + ++YP+
Sbjct: 106 RLHEYPDHPHNDRVLYQLARAYEHEQQREASQDALTRLAQQYPESPLLAEA 156
>gi|298507307|gb|ADI86030.1| pentapeptide repeat protein [Geobacter sulfurreducens KN400]
Length = 952
Score = 47.1 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 17/65 (26%), Positives = 26/65 (40%)
Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
G ++ +Y AAI R + VL Y D + A+ L A +A +S +
Sbjct: 43 GFNAYQKKDYQAAIDRMKTVLDKYPDTPLRDMAIFWLARASFKAGYERDAARYMSQFFKE 102
Query: 257 YPQGY 261
YP
Sbjct: 103 YPDSP 107
>gi|39998367|ref|NP_954318.1| hypothetical protein GSU3278 [Geobacter sulfurreducens PCA]
gi|39985313|gb|AAR36668.1| hypothetical protein GSU3278 [Geobacter sulfurreducens PCA]
Length = 966
Score = 47.1 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 17/65 (26%), Positives = 26/65 (40%)
Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
G ++ +Y AAI R + VL Y D + A+ L A +A +S +
Sbjct: 52 GFNAYQKKDYQAAIDRMKTVLDKYPDTPLRDMAIFWLARASFKAGYERDAARYMSQFFKE 111
Query: 257 YPQGY 261
YP
Sbjct: 112 YPDSP 116
>gi|329956615|ref|ZP_08297188.1| tetratricopeptide repeat protein [Bacteroides clarus YIT 12056]
gi|328523987|gb|EGF51063.1| tetratricopeptide repeat protein [Bacteroides clarus YIT 12056]
Length = 1010
Score = 47.1 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 29/226 (12%), Positives = 62/226 (27%), Gaps = 22/226 (9%)
Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
Y Y A + +++++ A + F + + + +
Sbjct: 506 SLAPQKNTEMYALAYYNLAYIAFHKKDYATAQDRFLKFIQLQKNGNATVLADAYNRIGDC 565
Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
+ + + + DY YY + + +L +Y +
Sbjct: 566 YMHVRRFDEARQYYTRAENLGTPAGDYSYYQLALVSGLQKNYDGKITLLNQLASKYPN-- 623
Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
E GR Y++ AI F+ +L Y ++
Sbjct: 624 --------------------SPYAVNALYEKGRSYVQSRNSNQAIATFRELLNKYPESPV 663
Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+ +A + Y + A E + +YP AR +K
Sbjct: 664 SRKAATEIGLLYYQNDDYNHAIEAYKYVISKYPGSEEARLAMRDLK 709
Score = 44.8 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 27/210 (12%), Positives = 55/210 (26%), Gaps = 20/210 (9%)
Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
+Y + + + +A FN+ P +L + K A +
Sbjct: 478 ADALYWRGESYYRLNRMQEAARNFNEYLSLAPQKNTEMYALAYYNLAYIAFHKKDYATAQ 537
Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
+ V I D R QY +R
Sbjct: 538 DRFLKFIQLQKNGNATV----LADAYNRIGDCYMHVRRFDEARQYYTR------------ 581
Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
+G ++ + Y I + + Y ++ +A A+ +
Sbjct: 582 ----AENLGTPAGDYSYYQLALVSGLQKNYDGKITLLNQLASKYPNSPYAVNALYEKGRS 637
Query: 237 YVALALMDEAREVVSLIQERYPQGYWARYV 266
YV ++A + +YP+ +R
Sbjct: 638 YVQSRNSNQAIATFRELLNKYPESPVSRKA 667
Score = 37.1 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 31/228 (13%), Positives = 69/228 (30%), Gaps = 15/228 (6%)
Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
+ +YEK +++ +N ++A F + +P + V+RK+ +
Sbjct: 615 NQLASKYPNSPYAVNALYEKGRSYVQSRNSNQAIATFRELLNKYPESPVSRKAATEIGLL 674
Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY---------------AQMIRDV 148
Y Y A + I++YP S+ + Y +
Sbjct: 675 YYQNDDYNHAIEAYKYVISKYPGSEEARLAMRDLKSIYVEANRVDEFAALAAQMPGVIRF 734
Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
++ + + ++ + R+ + + K +
Sbjct: 735 EPSEQDSLTYIAAEKVYMKGEISPARESFIRYLQSYPNGAFSLNAHYYLSLIGKEQKDET 794
Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
A+ L Y D+ ++EEA+ E + A +Q R
Sbjct: 795 AVLEHTSKLLEYPDSPYSEEALLMRGEILFNHKEYERALADYKQLQAR 842
Score = 35.5 bits (79), Expect = 8.1, Method: Composition-based stats.
Identities = 22/270 (8%), Positives = 64/270 (23%), Gaps = 29/270 (10%)
Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
+K ++ ++ L+ + S + + +YE+ +++ F+ A
Sbjct: 1 MKHKIYRIVYTALCCAPLLATAQTSEKIT---------SPQRLYEEGRNLFQQKAFAAAM 51
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
+ + A + I +V Y
Sbjct: 52 SPLHTFVKQ-LNAEGNPLFAAGDKEEAEYMLVCAEYELRSPNSIELLRSYLDV-YPDTPH 109
Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA------ 191
+I + + L + ++ + + +
Sbjct: 110 ANRIYALIASAYFFEGKYDEALAMFNSARLDLLSNEERDDMTYRLATCFLKTGNVKEAAI 169
Query: 192 --------KEVEIGRYYLKRGEYVAAIPRFQLVLANY----SDAEHAEEAMARLVEAYVA 239
+ R++ L+ + + ++ + E Y+
Sbjct: 170 WFETLRSTGSKYAADCTYYLSYIRYSQQRYENALSGFLSLQDNTKYKTLVPYYIAEIYLI 229
Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269
D+A V YP + + +
Sbjct: 230 KKNYDKAEIVAQNYLSAYPNQKYTGEMYRI 259
>gi|292490343|ref|YP_003525782.1| tol-pal system protein YbgF [Nitrosococcus halophilus Nc4]
gi|291578938|gb|ADE13395.1| tol-pal system protein YbgF [Nitrosococcus halophilus Nc4]
Length = 254
Score = 47.1 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 22/118 (18%), Positives = 46/118 (38%), Gaps = 14/118 (11%)
Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213
+ + + ++Y S Y A++++ G Y ++ AA F
Sbjct: 143 RYEEAMAAFRQFPQQYPESRYRPNAQYWL--------------GESYYMLRDFSAAAQAF 188
Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
Q + Y ++ +AM + AY L ++A+ + + RYP +R E ++
Sbjct: 189 QALAEQYPESAKVPDAMLKQGLAYYELEQWEQAKAQLQEVMARYPASTVSRLAEDRLE 246
Score = 40.9 bits (93), Expect = 0.20, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
K G Y A+ F+ Y ++ + A L E+Y L A + + E+YP+
Sbjct: 140 KEGRYEEAMAAFRQFPQQYPESRYRPNAQYWLGESYYMLRDFSAAAQAFQALAEQYPES- 198
Query: 262 WARYVETLVK 271
A+ + ++K
Sbjct: 199 -AKVPDAMLK 207
Score = 38.6 bits (87), Expect = 0.83, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 38/106 (35%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
+ Y+ A+ LKE + +A F Q + +P + + Y +
Sbjct: 122 DSAPDSGEPAYQAALKLLKEGRYEEAMAAFRQFPQQYPESRYRPNAQYWLGESYYMLRDF 181
Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
AA + QYPES V G++Y ++ + + +
Sbjct: 182 SAAAQAFQALAEQYPESAKVPDAMLKQGLAYYELEQWEQAKAQLQE 227
>gi|197284483|ref|YP_002150355.1| hypothetical protein PMI0586 [Proteus mirabilis HI4320]
gi|194681970|emb|CAR41404.1| putative exported protein [Proteus mirabilis HI4320]
Length = 257
Score = 47.1 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 18/120 (15%), Positives = 43/120 (35%), Gaps = 14/120 (11%)
Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
+ + + ++ ++ Y S Y A+F++ K+
Sbjct: 149 NSKDYDKAIVALNNFIKSYPKSSYQSNAQFWLGQMYYLKGNKDQAAST------------ 196
Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
F +V+ NY ++ A EA ++ D A+ + + ++YP A+ + +
Sbjct: 197 --FAIVVKNYPKSQKASEAFYKIGLIMQEKGQKDNAKAIYQQVVKQYPNSAGAKLAQKQL 254
Score = 46.3 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 13/75 (17%), Positives = 25/75 (33%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
L +Y AI + +Y + + A L + Y D+A ++
Sbjct: 140 YNAAIDIVLNSKDYDKAIVALNNFIKSYPKSSYQSNAQFWLGQMYYLKGNKDQAASTFAI 199
Query: 253 IQERYPQGYWARYVE 267
+ + YP+ A
Sbjct: 200 VVKNYPKSQKASEAF 214
>gi|237717254|ref|ZP_04547735.1| TPR domain-containing protein [Bacteroides sp. D1]
gi|262406021|ref|ZP_06082571.1| TPR domain-containing protein [Bacteroides sp. 2_1_22]
gi|294806889|ref|ZP_06765714.1| tetratricopeptide repeat protein [Bacteroides xylanisolvens SD CC
1b]
gi|229443237|gb|EEO49028.1| TPR domain-containing protein [Bacteroides sp. D1]
gi|262356896|gb|EEZ05986.1| TPR domain-containing protein [Bacteroides sp. 2_1_22]
gi|294445918|gb|EFG14560.1| tetratricopeptide repeat protein [Bacteroides xylanisolvens SD CC
1b]
Length = 1005
Score = 47.1 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 34/222 (15%), Positives = 70/222 (31%), Gaps = 22/222 (9%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
+ Y Y + +++++A YF + + + + + +
Sbjct: 502 QPNNEMYALANYNLGYIAFHRKDYTQASNYFQKYIQLEKG--------ENATALADAYNR 553
Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
+ + + G + V Q+ + ++R+V +Y
Sbjct: 554 IGDCHLHVRNFEEAKQYYSQAEQMNTSSGDYSFYQLALVSGLQKDYTGKITLLNRLVGKY 613
Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
SPY E GR Y+ AI F+ +L Y ++ + +A
Sbjct: 614 PASPY--------------AVNAIYEKGRSYVLMDNNNQAITSFKELLTKYPESPVSRKA 659
Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
A + Y ++A E + E+YP AR +K
Sbjct: 660 AAEIGLLYYQKGDYNQAIEAYKQVIEKYPGSEEARLAMRDLK 701
Score = 45.9 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 25/245 (10%), Positives = 59/245 (24%), Gaps = 18/245 (7%)
Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKS 96
+ R + Q+ +++ +F +A +Y NQ +
Sbjct: 415 KSIDRIAKPSAQILEAKQKILFQLGTQSFANADFEQALKYLNQSIAIGQYNRQTKADAYY 474
Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
++ + + +T P ++ Y +G K
Sbjct: 475 WCGESYYRLNRMVEAARDFNAYLQLTTQPNNEMYALANYNLGYIAFHRKDYTQASNYFQK 534
Query: 157 --------------LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
+ N K
Sbjct: 535 YIQLEKGENATALADAYNRIGDCHLHVRNFEEAKQYYSQAEQMNTSSGDYSFYQLALVSG 594
Query: 203 -RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
+ +Y I ++ Y + +A A+ +YV + ++A + +YP+
Sbjct: 595 LQKDYTGKITLLNRLVGKYPASPYAVNAIYEKGRSYVLMDNNNQAITSFKELLTKYPESP 654
Query: 262 WARYV 266
+R
Sbjct: 655 VSRKA 659
Score = 42.1 bits (96), Expect = 0.089, Method: Composition-based stats.
Identities = 31/262 (11%), Positives = 69/262 (26%), Gaps = 19/262 (7%)
Query: 19 LYK-FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
+ K I +I ++G+ + + D+ +Y++ +E+N++ A
Sbjct: 1 MKKEITRLICAAICCTPIIGFAQTGDKFTSTDN---------LYKEGKELFQERNYAAAL 51
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
+ P A + + + M Y + L + L
Sbjct: 52 PALKAFVKQKPAASLLQDAEYMLVSSAYELKDKNRIELLRKYLDRYPDTPYANRIYALLA 111
Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSR-----IVERYTNSPYVKGARFYVTVGRNQLAAK 192
+ + D + + + + T R A
Sbjct: 112 SCYFYEGKYDEALALFNSADLDLLGNEERDDCTYQLATCYLKTDNLREAAIWFETLRANS 171
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANY----SDAEHAEEAMARLVEAYVALALMDEARE 248
R+ L + D+++ + E Y L D+A+
Sbjct: 172 PKYAKDCDYYLSYIRYTQKRYSEALKGFLPLQDDSKYKALVPYYIAEIYTQLKNYDKAQI 231
Query: 249 VVSLIQERYPQGYWARYVETLV 270
V YP A + ++
Sbjct: 232 VAQNYLSAYPNNEHAAEMYRIL 253
Score = 36.3 bits (81), Expect = 5.2, Method: Composition-based stats.
Identities = 26/218 (11%), Positives = 59/218 (27%), Gaps = 22/218 (10%)
Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
S +++ ++ E +L+ ++ ++++A E + Q +P + AR ++
Sbjct: 639 AITSFKELLTKYPESPVSRKAAAEIGLLYYQKGDYNQAIEAYKQVIEKYPGSEEARLAMR 698
Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
+ + + A+L N + + +
Sbjct: 699 DLKSIYVDLNRIDEFAALANAMPGHIRFDANEQDSLTYAAAEKIYARGRMEEAKTSLNKY 758
Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
LQ + + I L
Sbjct: 759 LQTF----------------------PEGAFSLNAHYYLCLIGNEQKNYDMILLHSGKLL 796
Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
Y + AEEA+ E M EA +++E+
Sbjct: 797 EYPNNPFAEEALILRAEVQFNQQNMAEALASYKMLKEK 834
Score = 35.5 bits (79), Expect = 7.9, Method: Composition-based stats.
Identities = 30/224 (13%), Positives = 70/224 (31%), Gaps = 16/224 (7%)
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
Y A ++ + +N+ KA +P A + + Y G+Y QA Y
Sbjct: 214 YYIAEIYTQLKNYDKAQIVAQNYLSAYPNNEHAAEMYRILGDAYYHFGQYHQAVEAFNNY 273
Query: 121 ITQYPESKNVDYVYY----LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
+ + + D +Y + L + + + +
Sbjct: 274 LNKDRSAPRRDALYMLGLSYYQTKVYSKAAETLGKVTTDNDALTQNAYLHMGLSYLQLAE 333
Query: 177 GARFYV----------TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
+ + + + AA + + + ++ F+ L + + +A
Sbjct: 334 KNKARMAFEQAAASNANMQIKEQAAYNYALCLHETSFSAFGESVTAFEKFLNEFPTSPYA 393
Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
E+ + LVE Y+ D A + + I + P + ++
Sbjct: 394 EKVSSYLVEVYMNTRSYDAALKSIDRIAK--PSAQILEAKQKIL 435
>gi|95929063|ref|ZP_01311808.1| Tetratricopeptide TPR_2 [Desulfuromonas acetoxidans DSM 684]
gi|95134964|gb|EAT16618.1| Tetratricopeptide TPR_2 [Desulfuromonas acetoxidans DSM 684]
Length = 225
Score = 47.1 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 20/119 (16%), Positives = 42/119 (35%), Gaps = 2/119 (1%)
Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
P + ++ ERY ++ + + A + + +G+
Sbjct: 100 QPSATEIYRQAFADYTQ--ERYADAEHGFSEFLRLYPENPFAATACFRLAQSQQAQGKTQ 157
Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
A+ F V+++YSD A EA+ + A+ ++ + E YP A+
Sbjct: 158 QALSHFAEVVSHYSDDHKASEALYSMAVLLKKTNQPQHAQAALNRLIENYPDSAAAKKA 216
>gi|253699348|ref|YP_003020537.1| hypothetical protein GM21_0705 [Geobacter sp. M21]
gi|251774198|gb|ACT16779.1| conserved repeat domain protein [Geobacter sp. M21]
Length = 847
Score = 47.1 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 14/65 (21%), Positives = 25/65 (38%)
Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
G ++ EY AI ++L Y D + A+ L A+ +A + ++
Sbjct: 62 GFNAYQKKEYRTAIDSMSVLLKKYPDTPLKDMAIFWLARAHYKAGHQQDAAKYMAQFLRE 121
Query: 257 YPQGY 261
YP
Sbjct: 122 YPGSP 126
>gi|295085535|emb|CBK67058.1| Uncharacterized protein conserved in bacteria [Bacteroides
xylanisolvens XB1A]
Length = 1005
Score = 47.1 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 34/222 (15%), Positives = 70/222 (31%), Gaps = 22/222 (9%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
+ Y Y + +++++A YF + + + + + +
Sbjct: 502 QPNNEMYALANYNLGYIAFHRKDYTQASNYFQKYIQLEKG--------ENATALADAYNR 553
Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
+ + + G + V Q+ + ++R+V +Y
Sbjct: 554 IGDCHLHVRNFEEAKQYYSQAEQMNTSSGDYSFYQLALVSGLQKDYTGKITLLNRLVGKY 613
Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
SPY E GR Y+ AI F+ +L Y ++ + +A
Sbjct: 614 PASPY--------------AVNAIYEKGRSYVLMDNNNQAITSFKELLTKYPESPVSRKA 659
Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
A + Y ++A E + E+YP AR +K
Sbjct: 660 AAEIGLLYYQKGDYNQAIEAYKQVIEKYPGSEEARLAMRDLK 701
Score = 45.9 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 25/245 (10%), Positives = 59/245 (24%), Gaps = 18/245 (7%)
Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKS 96
+ R + Q+ +++ +F +A +Y NQ +
Sbjct: 415 KSIDRIAKPSAQILEAKQKILFQLGTQSFANADFEQALKYLNQSIAIGQYNRQTKADAYY 474
Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
++ + + +T P ++ Y +G K
Sbjct: 475 WCGESYYRLNRMVEAARDFNAYLQLTTQPNNEMYALANYNLGYIAFHRKDYTQASNYFQK 534
Query: 157 --------------LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
+ N K
Sbjct: 535 YIQLEKGENATALADAYNRIGDCHLHVRNFEEAKQYYSQAEQMNTSSGDYSFYQLALVSG 594
Query: 203 -RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
+ +Y I ++ Y + +A A+ +YV + ++A + +YP+
Sbjct: 595 LQKDYTGKITLLNRLVGKYPASPYAVNAIYEKGRSYVLMDNNNQAITSFKELLTKYPESP 654
Query: 262 WARYV 266
+R
Sbjct: 655 VSRKA 659
Score = 42.1 bits (96), Expect = 0.090, Method: Composition-based stats.
Identities = 31/262 (11%), Positives = 69/262 (26%), Gaps = 19/262 (7%)
Query: 19 LYK-FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
+ K I +I ++G+ + + D+ +Y++ +E+N++ A
Sbjct: 1 MKKEITRLICAAICCTPIIGFAQTGDKFTSTDN---------LYKEGKELFQERNYAAAL 51
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
+ P A + + + M Y + L + L
Sbjct: 52 PALKAFVKQKPAASLLQDAEYMLVSSAYELKDKNRIELLRKYLDRYPDTPYANRIYALLA 111
Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSR-----IVERYTNSPYVKGARFYVTVGRNQLAAK 192
+ + D + + + + T R A
Sbjct: 112 SCYFYEGKYDEALALFNSADLDLLGNEERDDCTYQLATCYLKTDNLREAAIWFETLRANS 171
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANY----SDAEHAEEAMARLVEAYVALALMDEARE 248
R+ L + D+++ + E Y L D+A+
Sbjct: 172 PKYAKDCDYYLSYIRYTQKRYSEALKGFLPLQDDSKYKALVPYYIAEIYTQLKNYDKAQI 231
Query: 249 VVSLIQERYPQGYWARYVETLV 270
V YP A + ++
Sbjct: 232 VAQNYLSAYPNNEHAAEMYRIL 253
Score = 35.9 bits (80), Expect = 5.3, Method: Composition-based stats.
Identities = 26/218 (11%), Positives = 59/218 (27%), Gaps = 22/218 (10%)
Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
S +++ ++ E +L+ ++ ++++A E + Q +P + AR ++
Sbjct: 639 AITSFKELLTKYPESPVSRKAAAEIGLLYYQKGDYNQAIEAYKQVIEKYPGSEEARLAMR 698
Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
+ + + A+L N + + +
Sbjct: 699 DLKSIYVDLNRIDEFAALANAMPGHIRFDANEQDSLTYAAAEKIYARGRMEEAKTSLNKY 758
Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
LQ + + I L
Sbjct: 759 LQTF----------------------PEGAFSLNAHYYLCLIGNEQKNYDMILLHSGKLL 796
Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
Y + AEEA+ E M EA +++E+
Sbjct: 797 EYPNNPFAEEALILRAEVQFNQQNMAEALASYKMLKEK 834
Score = 35.9 bits (80), Expect = 6.1, Method: Composition-based stats.
Identities = 30/224 (13%), Positives = 70/224 (31%), Gaps = 16/224 (7%)
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
Y A ++ + +N+ KA +P A + + Y G+Y QA Y
Sbjct: 214 YYIAEIYTQLKNYDKAQIVAQNYLSAYPNNEHAAEMYRILGDAYYHFGQYHQAVEAFNNY 273
Query: 121 ITQYPESKNVDYVYY----LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
+ + + D +Y + L + + + +
Sbjct: 274 LNKDHSAPRRDALYMLGLSYYQTKVYSKAAETLGKVTTDNDALTQNAYLHMGLSYLQLAE 333
Query: 177 GARFYV----------TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
+ + + + AA + + + ++ F+ L + + +A
Sbjct: 334 KNKARMAFEQAAASNTNMQIKEQAAYNYALCLHETSFSAFGESVTAFEKFLNEFPTSPYA 393
Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
E+ + LVE Y+ D A + + I + P + ++
Sbjct: 394 EKVSSYLVEVYMNTRSYDAALKSIDRIAK--PSAQILEAKQKIL 435
>gi|317047359|ref|YP_004115007.1| tol-pal system protein YbgF [Pantoea sp. At-9b]
gi|316948976|gb|ADU68451.1| tol-pal system protein YbgF [Pantoea sp. At-9b]
Length = 269
Score = 47.1 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 16/95 (16%), Positives = 32/95 (33%), Gaps = 2/95 (2%)
Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
+ + L++ +Y AI Q + Y D+ + A L +
Sbjct: 136 DSAAAAPTQSGDANSDYNAAVALILEKKQYDQAITALQAWVKRYPDSTYQPNANYWLGQL 195
Query: 237 YVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+ D+A + + + YP+ + E L K
Sbjct: 196 FYNKGKKDDAAYYFATVVKNYPKSP--KAAEALFK 228
Score = 46.7 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 19/120 (15%), Positives = 44/120 (36%), Gaps = 14/120 (11%)
Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
+++ + + V+RY +S Y A +++ K+ A
Sbjct: 161 EKKQYDQAITALQAWVKRYPDSTYQPNANYWLGQLFYNKGKKD--------------DAA 206
Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
F V+ NY + A EA+ ++ +A+ V + +++P A+ + +
Sbjct: 207 YYFATVVKNYPKSPKAAEALFKVGVIMQEKNDTAKAKAVYQQVIKQFPNSESAKLAQKRL 266
>gi|293368722|ref|ZP_06615327.1| tetratricopeptide repeat protein [Bacteroides ovatus SD CMC 3f]
gi|292636187|gb|EFF54674.1| tetratricopeptide repeat protein [Bacteroides ovatus SD CMC 3f]
Length = 1005
Score = 47.1 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 34/222 (15%), Positives = 70/222 (31%), Gaps = 22/222 (9%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
+ Y Y + +++++A YF + + + + + +
Sbjct: 502 QPNNEMYALANYNLGYIAFHRKDYTQASNYFQKYVQLEKG--------ENATALADAYNR 553
Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
+ + + G + V Q+ + ++R+V +Y
Sbjct: 554 IGDCHLHVRNFEEAKQYYSQAEQMNTSSGDYSFYQLALVSGLQKDYTGKITLLNRLVGKY 613
Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
SPY E GR Y+ AI F+ +L Y ++ + +A
Sbjct: 614 PASPY--------------AVNAIYEKGRSYVLMDNNNQAITSFKELLTKYPESPVSRKA 659
Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
A + Y ++A E + E+YP AR +K
Sbjct: 660 AAEIGLLYYQKGDYNQAIEAYKQVIEKYPGSEEARLAMRDLK 701
Score = 45.9 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 26/245 (10%), Positives = 59/245 (24%), Gaps = 18/245 (7%)
Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKS 96
+ R + Q+ +++ +F +A +Y NQ +
Sbjct: 415 KSIDRIAKPSAQILEAKQKILFQLGTQSFANADFEQALKYLNQSIAIGQYNRQTKADAYY 474
Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
++ + S +T P ++ Y +G K
Sbjct: 475 WCGESYYRLSRMVEAARDFNAYLQLTTQPNNEMYALANYNLGYIAFHRKDYTQASNYFQK 534
Query: 157 --------------LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
+ N K
Sbjct: 535 YVQLEKGENATALADAYNRIGDCHLHVRNFEEAKQYYSQAEQMNTSSGDYSFYQLALVSG 594
Query: 203 -RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
+ +Y I ++ Y + +A A+ +YV + ++A + +YP+
Sbjct: 595 LQKDYTGKITLLNRLVGKYPASPYAVNAIYEKGRSYVLMDNNNQAITSFKELLTKYPESP 654
Query: 262 WARYV 266
+R
Sbjct: 655 VSRKA 659
Score = 42.9 bits (98), Expect = 0.053, Method: Composition-based stats.
Identities = 31/262 (11%), Positives = 69/262 (26%), Gaps = 19/262 (7%)
Query: 19 LYK-FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
+ K I +I ++G+ + + D+ +Y++ +E+N++ A
Sbjct: 1 MKKEITRLICAAICCTPIIGFAQTGDKFTSTDN---------LYKEGKELFQEKNYAAAL 51
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
+ P A + + + M Y + L + L
Sbjct: 52 PALKAFVKQKPVASLLQDAEYMLVSSAYELKDKNRIELLRKYLDRYPDTPYANRIYALLA 111
Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSR-----IVERYTNSPYVKGARFYVTVGRNQLAAK 192
+ + D + + + + T R A
Sbjct: 112 SCYFYEGKYDEALALFNSADLDLLGNEERDDCTYQLATCYLKTDNLREAAIWFETLRANS 171
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANY----SDAEHAEEAMARLVEAYVALALMDEARE 248
R+ L + D+++ + E Y L D+A+
Sbjct: 172 PKYAKDCDYYLSYIRYTQKRYSEALKGFLPLQDDSKYKALVPYYIAEIYTQLKNYDKAQI 231
Query: 249 VVSLIQERYPQGYWARYVETLV 270
V YP A + ++
Sbjct: 232 VAQNYLSAYPNNEHAAEMYRIL 253
Score = 36.3 bits (81), Expect = 4.7, Method: Composition-based stats.
Identities = 26/218 (11%), Positives = 59/218 (27%), Gaps = 22/218 (10%)
Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
S +++ ++ E +L+ ++ ++++A E + Q +P + AR ++
Sbjct: 639 AITSFKELLTKYPESPVSRKAAAEIGLLYYQKGDYNQAIEAYKQVIEKYPGSEEARLAMR 698
Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
+ + + A+L N + + +
Sbjct: 699 DLKSIYVDLNRIDEFAALANAMPGHIRFDANEQDSLTYAAAEKIYARGRMEEAKTSLNKY 758
Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
LQ + + I L
Sbjct: 759 LQTF----------------------PEGAFSLNAHYYLCLIGNEQKNYDMILLHSGKLL 796
Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
Y + AEEA+ E M EA +++E+
Sbjct: 797 EYPNNPFAEEALILRAEVQFNQQNMAEALASYKMLKEK 834
Score = 35.5 bits (79), Expect = 7.3, Method: Composition-based stats.
Identities = 30/224 (13%), Positives = 70/224 (31%), Gaps = 16/224 (7%)
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
Y A ++ + +N+ KA +P A + + Y G+Y QA Y
Sbjct: 214 YYIAEIYTQLKNYDKAQIVAQNYLSAYPNNEHAAEMYRILGDAYYHFGQYHQAVEAFNNY 273
Query: 121 ITQYPESKNVDYVYY----LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
+ + + D +Y + L + + + +
Sbjct: 274 LNKDRSAPRRDALYMLGLSYYQTKVYSKAAETLGKVTTDNDALTQNAYLHMGLSYLQLAE 333
Query: 177 GARFYV----------TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
+ + + + AA + + + ++ F+ L + + +A
Sbjct: 334 KNKARMAFEQAAASNANMQIKEQAAYNYALCLHETSFSAFGESVTAFEKFLNEFPTSPYA 393
Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
E+ + LVE Y+ D A + + I + P + ++
Sbjct: 394 EKVSSYLVEVYMNTRSYDAALKSIDRIAK--PSAQILEAKQKIL 435
>gi|119504266|ref|ZP_01626346.1| hypothetical protein MGP2080_00300 [marine gamma proteobacterium
HTCC2080]
gi|119459774|gb|EAW40869.1| hypothetical protein MGP2080_00300 [marine gamma proteobacterium
HTCC2080]
Length = 309
Score = 47.1 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 18/122 (14%), Positives = 38/122 (31%), Gaps = 12/122 (9%)
Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
R + + R+ Y A +++ + E
Sbjct: 196 YVKSRNFTAAVDAFQDFLGRHPLGAYAPNAHYWLGELYL------------VVDPSEPEL 243
Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
A F+L+L Y +A+ +L + + D +RE + + YP+ A+
Sbjct: 244 ARQNFKLLLDQYPKNAKVPDALYKLGKVHFLKGSRDRSREYLEQVIREYPRHPAAQLARD 303
Query: 269 LV 270
+
Sbjct: 304 FL 305
>gi|325929355|ref|ZP_08190485.1| tol-pal system protein YbgF [Xanthomonas perforans 91-118]
gi|325540267|gb|EGD11879.1| tol-pal system protein YbgF [Xanthomonas perforans 91-118]
Length = 242
Score = 46.7 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 18/70 (25%), Positives = 26/70 (37%), Gaps = 2/70 (2%)
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
K G+Y A F L Y + + A+ L E+Y A A + RYP
Sbjct: 127 KNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHD 186
Query: 262 WARYVETLVK 271
+ L+K
Sbjct: 187 --KAAGGLLK 194
Score = 46.7 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 19/117 (16%), Positives = 42/117 (35%), Gaps = 14/117 (11%)
Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
Q +E Y N Y A +++ G Y + A +F+
Sbjct: 131 YDDASQLFLSFLELYPNGVYTPNALYWL--------------GESYYATRNFQLAEAQFR 176
Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+++ Y + A + +L + +EA++ + + +YP AR + ++
Sbjct: 177 DLVSRYPTHDKAAGGLLKLGLSQYGEGKNNEAQQTLQQVASQYPGSDAARVAQERLQ 233
Score = 39.0 bits (88), Expect = 0.64, Method: Composition-based stats.
Identities = 14/73 (19%), Positives = 26/73 (35%)
Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
+R Y A LK + A + F +P +L Y+ +Q A
Sbjct: 113 NDERTAYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAE 172
Query: 115 SLGEEYITQYPES 127
+ + +++YP
Sbjct: 173 AQFRDLVSRYPTH 185
>gi|294626854|ref|ZP_06705446.1| secreted protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB
11122]
gi|292598868|gb|EFF43013.1| secreted protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB
11122]
Length = 272
Score = 46.7 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 18/70 (25%), Positives = 26/70 (37%), Gaps = 2/70 (2%)
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
K G+Y A F L Y + + A+ L E+Y A A + RYP
Sbjct: 157 KNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHD 216
Query: 262 WARYVETLVK 271
+ L+K
Sbjct: 217 --KAAGGLLK 224
Score = 46.7 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 19/117 (16%), Positives = 42/117 (35%), Gaps = 14/117 (11%)
Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
Q +E Y N Y A +++ G Y + A +F+
Sbjct: 161 YDDASQLFLSFLELYPNGVYTPNALYWL--------------GESYYATRNFQLAEAQFR 206
Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+++ Y + A + +L + +EA++ + + +YP AR + ++
Sbjct: 207 DLVSRYPTHDKAAGGLLKLGLSQYGEGKNNEAQQTLQQVASQYPGSDAARVAQERLQ 263
Score = 39.0 bits (88), Expect = 0.64, Method: Composition-based stats.
Identities = 14/73 (19%), Positives = 26/73 (35%)
Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
+R Y A LK + A + F +P +L Y+ +Q A
Sbjct: 143 NDERTAYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAE 202
Query: 115 SLGEEYITQYPES 127
+ + +++YP
Sbjct: 203 AQFRDLVSRYPTH 215
>gi|289661911|ref|ZP_06483492.1| tol-pal system protein YbgF [Xanthomonas campestris pv. vasculorum
NCPPB702]
gi|289667002|ref|ZP_06488077.1| tol-pal system protein YbgF [Xanthomonas campestris pv. musacearum
NCPPB4381]
Length = 272
Score = 46.7 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 18/70 (25%), Positives = 26/70 (37%), Gaps = 2/70 (2%)
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
K G+Y A F L Y + + A+ L E+Y A A + RYP
Sbjct: 157 KNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHD 216
Query: 262 WARYVETLVK 271
+ L+K
Sbjct: 217 --KAAGGLLK 224
Score = 46.7 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 19/117 (16%), Positives = 42/117 (35%), Gaps = 14/117 (11%)
Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
Q +E Y N Y A +++ G Y + A +F+
Sbjct: 161 YDDASQLFLSFLELYPNGVYTPNALYWL--------------GESYYATRNFQLAEAQFR 206
Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+++ Y + A + +L + +EA++ + + +YP AR + ++
Sbjct: 207 DLVSRYPTHDKAAGGLLKLGLSQYGEGKNNEAQQTLQQVASQYPGSDAARVAQERLQ 263
Score = 39.0 bits (88), Expect = 0.64, Method: Composition-based stats.
Identities = 14/73 (19%), Positives = 26/73 (35%)
Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
+R Y A LK + A + F +P +L Y+ +Q A
Sbjct: 143 NDERTAYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAE 202
Query: 115 SLGEEYITQYPES 127
+ + +++YP
Sbjct: 203 AQFRDLVSRYPTH 215
>gi|255011465|ref|ZP_05283591.1| TPR repeat-containing protein [Bacteroides fragilis 3_1_12]
gi|313149284|ref|ZP_07811477.1| TPR domain-containing protein [Bacteroides fragilis 3_1_12]
gi|313138051|gb|EFR55411.1| TPR domain-containing protein [Bacteroides fragilis 3_1_12]
Length = 1002
Score = 46.7 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 16/211 (7%), Positives = 45/211 (21%), Gaps = 22/211 (10%)
Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
+Y + + + +A F + +L + + +
Sbjct: 469 ADALYWRGEAYYRLNRMEEAKRNFTDYLQLTQQTNNEMYALAHYNLGYIAFHQKDYVQAQ 528
Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
+ + ++ A + N K
Sbjct: 529 ---------------------NWFRKYISLEKGENKTALADAYNRIGDCYLDVRNFDEAK 567
Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF-QLVLANYSDAEHAEEAMARLVE 235
+ + + + Y + +A A+
Sbjct: 568 HYYSQAEAMNTPSGDYSFYQLALVSGLQKDYSGKITWLNRLAGKYPASPYAISALYEKGR 627
Query: 236 AYVALALMDEAREVVSLIQERYPQGYWARYV 266
+YV + +A + +YP+ +R
Sbjct: 628 SYVLMDNNQQAITSFKELLAKYPESPVSRKA 658
Score = 40.2 bits (91), Expect = 0.36, Method: Composition-based stats.
Identities = 37/261 (14%), Positives = 73/261 (27%), Gaps = 17/261 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA-- 76
+ K + ++A C V + Q+S + +Y++ ++N++ A
Sbjct: 1 MKKKISRLICAVACCVPVALQAQTSEKIT--------SPVNLYKEGKELFLQKNYAAAMP 52
Query: 77 -YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
F + D A L+ SA+ Q S + Y ++ +
Sbjct: 53 PLRTFVRQKADVNLKEEAEYMLVCSAYELKDRNAIAQLRSYLDTYPDTPHANRIYALIAS 112
Query: 136 LVGMSYAQ-----MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
+ D + R+ Y VK A + +
Sbjct: 113 AYFYQGNYDEALALFNSSRLDLLGNEERDDMTYRLATCYLKVGNVKEAAIWFETLKASSP 172
Query: 191 AKEVEIGRYYLKRGEYVAAIPR-FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
+ Y + L DA++ + E Y D+A+ V
Sbjct: 173 KYANDCSYYISYIRYTQKRYDEALKGFLPLQDDAKYKALVPYYIAEIYAIKKNYDKAQIV 232
Query: 250 VSLIQERYPQGYWARYVETLV 270
YPQ A + ++
Sbjct: 233 AQNYLSAYPQNEHAAEMYRIL 253
>gi|188577426|ref|YP_001914355.1| tol-pal system protein YbgF, putative [Xanthomonas oryzae pv.
oryzae PXO99A]
gi|188521878|gb|ACD59823.1| tol-pal system protein YbgF, putative [Xanthomonas oryzae pv.
oryzae PXO99A]
Length = 268
Score = 46.7 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 18/70 (25%), Positives = 26/70 (37%), Gaps = 2/70 (2%)
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
K G+Y A F L Y + + A+ L E+Y A A + RYP
Sbjct: 153 KNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHD 212
Query: 262 WARYVETLVK 271
+ L+K
Sbjct: 213 --KAAGGLLK 220
Score = 45.6 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 19/117 (16%), Positives = 41/117 (35%), Gaps = 14/117 (11%)
Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
Q +E Y N Y A +++ G Y + A +F+
Sbjct: 157 YDDASQLFLSFLELYPNGVYTPNALYWL--------------GESYYATRNFQLAEAQFR 202
Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+++ Y + A + +L + +EA+ + + +YP AR + ++
Sbjct: 203 DLVSRYPTHDKAAGGLLKLGLSQYGEGKNNEAQRTLQHVASQYPGSDAARVAQERLQ 259
Score = 39.0 bits (88), Expect = 0.64, Method: Composition-based stats.
Identities = 14/73 (19%), Positives = 26/73 (35%)
Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
+R Y A LK + A + F +P +L Y+ +Q A
Sbjct: 139 NDERTAYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAE 198
Query: 115 SLGEEYITQYPES 127
+ + +++YP
Sbjct: 199 AQFRDLVSRYPTH 211
>gi|166712981|ref|ZP_02244188.1| hypothetical protein Xoryp_16440 [Xanthomonas oryzae pv. oryzicola
BLS256]
Length = 272
Score = 46.7 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 18/70 (25%), Positives = 26/70 (37%), Gaps = 2/70 (2%)
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
K G+Y A F L Y + + A+ L E+Y A A + RYP
Sbjct: 157 KNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHD 216
Query: 262 WARYVETLVK 271
+ L+K
Sbjct: 217 --KAAGGLLK 224
Score = 45.9 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 19/117 (16%), Positives = 42/117 (35%), Gaps = 14/117 (11%)
Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
Q +E Y N Y A +++ G Y + A +F+
Sbjct: 161 YDDASQLFLSFLELYPNGVYTPNALYWL--------------GESYYATRNFQLAEAQFR 206
Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+++ Y + A + +L + +EA++ + + +YP AR + ++
Sbjct: 207 DLVSRYPTHDKAAGGLLKLGLSQYGEGKNNEAQQTLQHVASQYPGSDAARVAQERLQ 263
Score = 39.0 bits (88), Expect = 0.64, Method: Composition-based stats.
Identities = 14/73 (19%), Positives = 26/73 (35%)
Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
+R Y A LK + A + F +P +L Y+ +Q A
Sbjct: 143 NDERTAYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAE 202
Query: 115 SLGEEYITQYPES 127
+ + +++YP
Sbjct: 203 AQFRDLVSRYPTH 215
>gi|21232446|ref|NP_638363.1| hypothetical protein XCC3016 [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66767471|ref|YP_242233.1| hypothetical protein XC_1143 [Xanthomonas campestris pv. campestris
str. 8004]
gi|188990577|ref|YP_001902587.1| Putative secreted protein [Xanthomonas campestris pv. campestris
str. B100]
gi|21114227|gb|AAM42287.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66572803|gb|AAY48213.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. 8004]
gi|167732337|emb|CAP50529.1| Putative secreted protein [Xanthomonas campestris pv. campestris]
Length = 272
Score = 46.7 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 18/70 (25%), Positives = 26/70 (37%), Gaps = 2/70 (2%)
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
K G+Y A F L Y + + A+ L E+Y A A + RYP
Sbjct: 157 KNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHD 216
Query: 262 WARYVETLVK 271
+ L+K
Sbjct: 217 --KAAGGLLK 224
Score = 45.6 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 19/117 (16%), Positives = 41/117 (35%), Gaps = 14/117 (11%)
Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
Q +E Y N Y A +++ G Y + A +F+
Sbjct: 161 YDDASQLFLSFLELYPNGVYTPNALYWL--------------GESYYATRNFQLAEAQFR 206
Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+++ Y + A + +L + EA++ + + +YP AR + ++
Sbjct: 207 DLVSRYPTHDKAAGGLLKLGLSQYGEGKNTEAQQTLQQVATQYPGSDAARVAQERLQ 263
Score = 39.4 bits (89), Expect = 0.61, Method: Composition-based stats.
Identities = 14/73 (19%), Positives = 26/73 (35%)
Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
+R Y A LK + A + F +P +L Y+ +Q A
Sbjct: 143 NEERTAYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAE 202
Query: 115 SLGEEYITQYPES 127
+ + +++YP
Sbjct: 203 AQFRDLVSRYPTH 215
>gi|21243866|ref|NP_643448.1| hypothetical protein XAC3140 [Xanthomonas axonopodis pv. citri str.
306]
gi|21109467|gb|AAM37984.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
str. 306]
Length = 272
Score = 46.7 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 18/70 (25%), Positives = 26/70 (37%), Gaps = 2/70 (2%)
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
K G+Y A F L Y + + A+ L E+Y A A + RYP
Sbjct: 157 KNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHD 216
Query: 262 WARYVETLVK 271
+ L+K
Sbjct: 217 --KAAGGLLK 224
Score = 46.7 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 19/117 (16%), Positives = 42/117 (35%), Gaps = 14/117 (11%)
Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
Q +E Y N Y A +++ G Y + A +F+
Sbjct: 161 YDDASQLFLSFLELYPNGVYTPNALYWL--------------GESYYATRNFQLAEAQFR 206
Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+++ Y + A + +L + +EA++ + + +YP AR + ++
Sbjct: 207 DLVSRYPTHDKAAGGLLKLGLSQYGEGKNNEAQQTLQQVASQYPGSDAARVAQERLQ 263
Score = 39.0 bits (88), Expect = 0.64, Method: Composition-based stats.
Identities = 14/73 (19%), Positives = 26/73 (35%)
Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
+R Y A LK + A + F +P +L Y+ +Q A
Sbjct: 143 NDERTAYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAE 202
Query: 115 SLGEEYITQYPES 127
+ + +++YP
Sbjct: 203 AQFRDLVSRYPTH 215
>gi|78048826|ref|YP_365001.1| putative secreted protein [Xanthomonas campestris pv. vesicatoria
str. 85-10]
gi|294665413|ref|ZP_06730701.1| secreted protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB
10535]
gi|78037256|emb|CAJ25001.1| putative secreted protein [Xanthomonas campestris pv. vesicatoria
str. 85-10]
gi|292604824|gb|EFF48187.1| secreted protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB
10535]
Length = 272
Score = 46.7 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 18/70 (25%), Positives = 26/70 (37%), Gaps = 2/70 (2%)
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
K G+Y A F L Y + + A+ L E+Y A A + RYP
Sbjct: 157 KNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHD 216
Query: 262 WARYVETLVK 271
+ L+K
Sbjct: 217 --KAAGGLLK 224
Score = 46.7 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 19/117 (16%), Positives = 42/117 (35%), Gaps = 14/117 (11%)
Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
Q +E Y N Y A +++ G Y + A +F+
Sbjct: 161 YDDASQLFLSFLELYPNGVYTPNALYWL--------------GESYYATRNFQLAEAQFR 206
Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+++ Y + A + +L + +EA++ + + +YP AR + ++
Sbjct: 207 DLVSRYPTHDKAAGGLLKLGLSQYGEGKNNEAQQTLQQVASQYPGSDAARVAQERLQ 263
Score = 39.0 bits (88), Expect = 0.64, Method: Composition-based stats.
Identities = 14/73 (19%), Positives = 26/73 (35%)
Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
+R Y A LK + A + F +P +L Y+ +Q A
Sbjct: 143 NDERTAYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAE 202
Query: 115 SLGEEYITQYPES 127
+ + +++YP
Sbjct: 203 AQFRDLVSRYPTH 215
>gi|58581293|ref|YP_200309.1| hypothetical protein XOO1670 [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|84623211|ref|YP_450583.1| hypothetical protein XOO_1554 [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|58425887|gb|AAW74924.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|84367151|dbj|BAE68309.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF
311018]
Length = 272
Score = 46.7 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 18/70 (25%), Positives = 26/70 (37%), Gaps = 2/70 (2%)
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
K G+Y A F L Y + + A+ L E+Y A A + RYP
Sbjct: 157 KNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHD 216
Query: 262 WARYVETLVK 271
+ L+K
Sbjct: 217 --KAAGGLLK 224
Score = 45.6 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 19/117 (16%), Positives = 41/117 (35%), Gaps = 14/117 (11%)
Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
Q +E Y N Y A +++ G Y + A +F+
Sbjct: 161 YDDASQLFLSFLELYPNGVYTPNALYWL--------------GESYYATRNFQLAEAQFR 206
Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+++ Y + A + +L + +EA+ + + +YP AR + ++
Sbjct: 207 DLVSRYPTHDKAAGGLLKLGLSQYGEGKNNEAQRTLQHVASQYPGSDAARVAQERLQ 263
Score = 39.0 bits (88), Expect = 0.64, Method: Composition-based stats.
Identities = 14/73 (19%), Positives = 26/73 (35%)
Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
+R Y A LK + A + F +P +L Y+ +Q A
Sbjct: 143 NDERTAYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAE 202
Query: 115 SLGEEYITQYPES 127
+ + +++YP
Sbjct: 203 AQFRDLVSRYPTH 215
>gi|315126278|ref|YP_004068281.1| prenylyltransferase domain-containing protein [Pseudoalteromonas
sp. SM9913]
gi|315014792|gb|ADT68130.1| prenylyltransferase domain-containing protein [Pseudoalteromonas
sp. SM9913]
Length = 250
Score = 46.7 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 19/121 (15%), Positives = 45/121 (37%), Gaps = 14/121 (11%)
Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
+ + + Y NS Y A +++ G+ + + V A
Sbjct: 142 MKDKRYDQAIPEFQAFLTTYPNSVYTSNAHYWL--------------GQLLTIKNDGVKA 187
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
F++V+ + ++ +AM +L L EA+++++ + +YP A+
Sbjct: 188 AEHFKVVVNEFPNSNKRPDAMLKLGTLLQEQGLKAEAQKILNELINQYPSTTAAKLATER 247
Query: 270 V 270
+
Sbjct: 248 L 248
Score = 36.7 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 16/102 (15%), Positives = 32/102 (31%), Gaps = 2/102 (1%)
Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
+ Y + + +K Y AIP FQ L Y ++ + A
Sbjct: 111 PTTDYTQPSNEQSYSSDLSENEAYERAVALIMKDKRYDQAIPEFQAFLTTYPNSVYTSNA 170
Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
L + +A E ++ +P + + ++K
Sbjct: 171 HYWLGQLLTIKNDGVKAAEHFKVVVNEFPNSN--KRPDAMLK 210
>gi|218768443|ref|YP_002342955.1| putative periplasmic protein [Neisseria meningitidis Z2491]
gi|121052451|emb|CAM08787.1| putative periplasmic protein [Neisseria meningitidis Z2491]
gi|319410687|emb|CBY91066.1| conserved hypothetical TPR-containing periplasmic protein
[Neisseria meningitidis WUE 2594]
Length = 238
Score = 46.7 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 14/72 (19%), Positives = 24/72 (33%)
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
+ + + G + I + D+ A EAM ++ E L D AR
Sbjct: 155 QRSMYLLLQSRARMGNCESVIEIGGRYANRFKDSPTAPEAMFKIGECQYRLQQKDIARAT 214
Query: 250 VSLIQERYPQGY 261
+ + YP
Sbjct: 215 WRSLIQTYPGSP 226
>gi|113474798|ref|YP_720859.1| hypothetical protein Tery_1009 [Trichodesmium erythraeum IMS101]
gi|110165846|gb|ABG50386.1| TPR repeat [Trichodesmium erythraeum IMS101]
Length = 273
Score = 46.7 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 24/241 (9%), Positives = 59/241 (24%), Gaps = 34/241 (14%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K +TI CF ++ + + ++++A+ F+ A +
Sbjct: 5 IQKLFITILLFFLFCFSNPSNVIAATQSQNITPAQLEELHNLFDQALNASNNGEFANAEK 64
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+ Q +P + Q + +
Sbjct: 65 LWTQIIELYPDNPAIWSNRGNIRLSQNKIE--------------EAISDYEKAIEILPLA 110
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
+ + ++++E Y G + + E
Sbjct: 111 PDAYLNRGIAYERIKKWSEAIADYNQVIELDPT-----DPVAYNNRGNAEGGLGKWEKAT 165
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
K+ +A F A+A A + +A + + + +YP
Sbjct: 166 EDYKKASELAPEYAF---------------ALANYSLALYQIGQTQKAVQTMKSLVRKYP 210
Query: 259 Q 259
Sbjct: 211 N 211
>gi|291288226|ref|YP_003505042.1| tol-pal system protein YbgF [Denitrovibrio acetiphilus DSM 12809]
gi|290885386|gb|ADD69086.1| tol-pal system protein YbgF [Denitrovibrio acetiphilus DSM 12809]
Length = 251
Score = 46.7 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 26/254 (10%), Positives = 73/254 (28%), Gaps = 11/254 (4%)
Query: 21 KFALTIFFSIAVCFLVGWERQSS-RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
+ + IA L L+++ D + + +
Sbjct: 1 MYKKFLIVMIAGLSLSACTGNQDLVQQSLNNIKDEMLGIQS--------TIGDMQVQIQG 52
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
++ R + + + + + + + +V
Sbjct: 53 LDKDIRVNTESINRNSDAISQLREEMTVTNSDVMEIKERVTELERTKMELSADHSPIVMK 112
Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVE--RYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
S + + V + + + Y + +Y S + +G
Sbjct: 113 SGDEEVIIVEDNIQDKIGLYTYAYELYRNGKYAESETKFNEFLMKYPDVERSDNAMYWLG 172
Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
+Y +A+ +FQ ++ Y + +A+ ++ +Y ++ D A + + + Y
Sbjct: 173 EIKYAEKDYESAVMKFQELVERYPEGNKVPDALLKMGYSYGNISDKDNAVKSLQKVVNMY 232
Query: 258 PQGYWARYVETLVK 271
P+ AR ++
Sbjct: 233 PESDAARLATQKLR 246
>gi|213585772|ref|ZP_03367598.1| outer membrane protein assembly complex subunit YfiO [Salmonella
enterica subsp. enterica serovar Typhi str. E98-0664]
Length = 75
Score = 46.7 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 11/79 (13%), Positives = 24/79 (30%), Gaps = 7/79 (8%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + + + FL G E+Y A L++ N+ +A
Sbjct: 1 MTRMKYLVAAATLSLFLAGCSGSKEE-------VPDNPPNEIYATAQQKLQDGNWKQAIT 53
Query: 79 YFNQCSRDFPFAGVARKSL 97
+PF +++
Sbjct: 54 QLEALDNRYPFGPYSQQVQ 72
>gi|237719009|ref|ZP_04549490.1| TPR-domain-containing protein [Bacteroides sp. 2_2_4]
gi|229451787|gb|EEO57578.1| TPR-domain-containing protein [Bacteroides sp. 2_2_4]
Length = 1005
Score = 46.7 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 34/222 (15%), Positives = 70/222 (31%), Gaps = 22/222 (9%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
+ Y Y + +++++A YF + + + + + +
Sbjct: 502 QPNNEMYALANYNLGYIAFHRKDYTQASNYFQKYVQLEKG--------ENATALADAYNR 553
Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
+ + + G + V Q+ + ++R+V +Y
Sbjct: 554 IGDCHLHVRNFEEAKQYYSQAEQMNTSSGDYSFYQLALVSGLQKDYTGKITLLNRLVGKY 613
Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
SPY E GR Y+ AI F+ +L Y ++ + +A
Sbjct: 614 PASPY--------------AVNAIYEKGRSYVLMDNNNQAITSFKELLTKYPESPVSRKA 659
Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
A + Y ++A E + E+YP AR +K
Sbjct: 660 AAEIGLLYYQKGDYNQAIEAYKQVIEKYPGSEEARLAMRDLK 701
Score = 45.9 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 26/245 (10%), Positives = 59/245 (24%), Gaps = 18/245 (7%)
Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKS 96
+ R + Q+ +++ +F +A +Y NQ +
Sbjct: 415 KSIDRIAKPSAQILEAKQKILFQLGTQSFANADFEQALKYLNQSIAIGQYNRQTKADAYY 474
Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
++ + S +T P ++ Y +G K
Sbjct: 475 WCGESYYRLSRMVEAARDFNAYLQLTTQPNNEMYALANYNLGYIAFHRKDYTQASNYFQK 534
Query: 157 --------------LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
+ N K
Sbjct: 535 YVQLEKGENATALADAYNRIGDCHLHVRNFEEAKQYYSQAEQMNTSSGDYSFYQLALVSG 594
Query: 203 -RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
+ +Y I ++ Y + +A A+ +YV + ++A + +YP+
Sbjct: 595 LQKDYTGKITLLNRLVGKYPASPYAVNAIYEKGRSYVLMDNNNQAITSFKELLTKYPESP 654
Query: 262 WARYV 266
+R
Sbjct: 655 VSRKA 659
Score = 42.9 bits (98), Expect = 0.055, Method: Composition-based stats.
Identities = 31/262 (11%), Positives = 69/262 (26%), Gaps = 19/262 (7%)
Query: 19 LYK-FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
+ K I +I ++G+ + + D+ +Y++ +E+N++ A
Sbjct: 1 MKKEITRLICAAICCTPIIGFAQTGDKFTSTDN---------LYKEGKELFQEKNYAAAL 51
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
+ P A + + + M Y + L + L
Sbjct: 52 PALKAFVKQKPVASLLQDAEYMLVSSAYELKDKNRIELLRKYLDRYPDTPYANRIYALLA 111
Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSR-----IVERYTNSPYVKGARFYVTVGRNQLAAK 192
+ + D + + + + T R A
Sbjct: 112 SCYFYEGKYDEALALFNSADLDLLGNEERDDCTYQLATCYLKTDNLREAAIWFETLRANS 171
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANY----SDAEHAEEAMARLVEAYVALALMDEARE 248
R+ L + D+++ + E Y L D+A+
Sbjct: 172 PKYAKDCDYYLSYIRYTQKRYSEALKGFLPLQDDSKYKALVPYYIAEIYTQLKNYDKAQI 231
Query: 249 VVSLIQERYPQGYWARYVETLV 270
V YP A + ++
Sbjct: 232 VAQNYLSAYPNNEHAAEMYRIL 253
Score = 36.3 bits (81), Expect = 5.0, Method: Composition-based stats.
Identities = 26/218 (11%), Positives = 59/218 (27%), Gaps = 22/218 (10%)
Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
S +++ ++ E +L+ ++ ++++A E + Q +P + AR ++
Sbjct: 639 AITSFKELLTKYPESPVSRKAAAEIGLLYYQKGDYNQAIEAYKQVIEKYPGSEEARLAMR 698
Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
+ + + A+L N + + +
Sbjct: 699 DLKSIYVDLNRIDEFAALANAMPGHIRFDANEQDSLTYAAAEKIYARGRMEEAKTSLNKY 758
Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
LQ + + I L
Sbjct: 759 LQTF----------------------PEGAFSLNAHYYLCLIGNEQKNYDMILLHSGKLL 796
Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
Y + AEEA+ E M EA +++E+
Sbjct: 797 EYPNNPFAEEALILRAEVQFNQQNMAEALASYKMLKEK 834
Score = 35.5 bits (79), Expect = 7.5, Method: Composition-based stats.
Identities = 30/224 (13%), Positives = 70/224 (31%), Gaps = 16/224 (7%)
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
Y A ++ + +N+ KA +P A + + Y G+Y QA Y
Sbjct: 214 YYIAEIYTQLKNYDKAQIVAQNYLSAYPNNEHAAEMYRILGDAYYHFGQYHQAVEAFNNY 273
Query: 121 ITQYPESKNVDYVYY----LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
+ + + D +Y + L + + + +
Sbjct: 274 LNKDRSAPRRDALYMLGLSYYQTKVYSKAAETLGKVTTDNDALTQNAYLHMGLSYLQLAE 333
Query: 177 GARFYV----------TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
+ + + + AA + + + ++ F+ L + + +A
Sbjct: 334 KNKARMAFEQAAASNANMQIKEQAAYNYALCLHETSFSAFGESVTAFEKFLNEFPTSPYA 393
Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
E+ + LVE Y+ D A + + I + P + ++
Sbjct: 394 EKVSSYLVEVYMNTRSYDAALKSIDRIAK--PSAQILEAKQKIL 435
>gi|145588461|ref|YP_001155058.1| TPR repeat-containing protein [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|145046867|gb|ABP33494.1| Tetratricopeptide TPR_2 repeat protein [Polynucleobacter
necessarius subsp. asymbioticus QLW-P1DMWA-1]
Length = 243
Score = 46.7 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 23/123 (18%), Positives = 43/123 (34%), Gaps = 2/123 (1%)
Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
P +++A L+ + + + A Y LA G +Y
Sbjct: 119 QPGEKKAYDDALKAFQAGNLKKADEGFSAFAAKYPKSPYLPLALY--WSGNSKYANKDYA 176
Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
AI + Q ++ Y + AM L + + A++ S I +YP A+ +
Sbjct: 177 GAISQLQSLIKRYPNHPRIPAAMVTLGNSQLESGNKAAAKKTFSEIIAKYPDTDAAKDAQ 236
Query: 268 TLV 270
L+
Sbjct: 237 QLM 239
Score = 35.9 bits (80), Expect = 5.4, Method: Composition-based stats.
Identities = 15/101 (14%), Positives = 27/101 (26%)
Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
Y + R N ++ K + + G A F A
Sbjct: 91 KTYYQDLDTRLGNFEPRTITIEGLSGTVQPGEKKAYDDALKAFQAGNLKKADEGFSAFAA 150
Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
Y + + A+ + A A + + +RYP
Sbjct: 151 KYPKSPYLPLALYWSGNSKYANKDYAGAISQLQSLIKRYPN 191
>gi|171912815|ref|ZP_02928285.1| hypothetical protein VspiD_16585 [Verrucomicrobium spinosum DSM
4136]
Length = 463
Score = 46.7 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 17/113 (15%), Positives = 36/113 (31%), Gaps = 1/113 (0%)
Query: 156 KLMLQYMSRIVERYTNSPYVKGA-RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
+ + + ++ Y SP A + + A K+ + + + ++
Sbjct: 112 QDAYEGFQKFIDNYRQSPRFSEALQQQFEIAEEAKAGKKQPSLLLIPMKLDKSELVKMYE 171
Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
V+ N ++A A + E Y A + E YP A +
Sbjct: 172 GVIKNSPYGKYAPYAQFAIGEVYQDDGDKPMANASYQAVVENYPNTKLASEAQ 224
Score = 43.6 bits (100), Expect = 0.028, Method: Composition-based stats.
Identities = 35/240 (14%), Positives = 71/240 (29%), Gaps = 14/240 (5%)
Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
++ + + + + A N +A + + F A ++
Sbjct: 40 SKEDAVPSVSEKQSQEAAADAMLRDARTASSTGNAGRAQSIYKDVVARYKFTDAAAEAQF 99
Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
+ + GK Q A +++I Y +S + M
Sbjct: 100 ELSRGLRATGKLQDAYEGFQKFIDNYRQSPRFSEALQQQFEIAEEAKAGKKQPSLLLIPM 159
Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
S +V+ + + + IG Y G+ A +Q V+
Sbjct: 160 KLDKSELVK-------MYEGVIKNSPYGKYAPYAQFAIGEVYQDDGDKPMANASYQAVVE 212
Query: 219 NYSDAEHAEEAMARLVEAYVALALMDE-------AREVVSLIQERYPQGYWARYVETLVK 271
NY + + A EA R+ A A + R+ + + P G E+L++
Sbjct: 213 NYPNTKLASEAQFRIGAISSAAARKTQDAQNLTATRDALETYKMANPSGERTSEAESLIQ 272
>gi|289548076|ref|YP_003473064.1| sporulation domain protein [Thermocrinis albus DSM 14484]
gi|289181693|gb|ADC88937.1| Sporulation domain protein [Thermocrinis albus DSM 14484]
Length = 353
Score = 46.7 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 27/243 (11%), Positives = 72/243 (29%), Gaps = 20/243 (8%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + L + ++ C + R Y+ + L +N+S+A
Sbjct: 1 MIRRWLLLSLIVSSCA------------QIQENKGAESARYYYDMGMSSLISRNYSEAIA 48
Query: 79 YFNQCSRDFPFAGVARK-----SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
+ SR+ P+ + + + + + +
Sbjct: 49 NLFRASRENPYDPKIWNALGIAYMEAGEYEKAESAFVKALSVDKNFTDATLQLGILHFRK 108
Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
+ + Y++R+ + N +
Sbjct: 109 GEYDKAKEYLLKAISDEGFPQKHMAFYYLARVEKAVGNERGYLENLRKAVAYYPLFLEAQ 168
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+E+ + Y RGEY AA+ ++ + +N ++ + Y A+ ++A+ ++ +
Sbjct: 169 MELAQAYESRGEYDAALDVYRTLQSNGVNSPSV---RLGMARVYYAMGDTEKAKGLLREL 225
Query: 254 QER 256
E
Sbjct: 226 LED 228
>gi|86143443|ref|ZP_01061828.1| putative TPR-repeat protein [Leeuwenhoekiella blandensis MED217]
gi|85829890|gb|EAQ48351.1| putative TPR-repeat protein [Leeuwenhoekiella blandensis MED217]
Length = 1007
Score = 46.7 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 26/239 (10%), Positives = 62/239 (25%), Gaps = 16/239 (6%)
Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
+ + V YQ+ + + + + ++ +A F + + ++L A +
Sbjct: 413 ENNRNFEDKVAYQKVAFYRGIELYNDGDYQEAIINFEKSLSEPRTPEFTARALYWKAESE 472
Query: 105 YSAGKYQQAASLGEEYITQ-------------YPESKNVDYVYYLVGMSYAQMIRDVPYD 151
Y+ + A +++ Y +
Sbjct: 473 YTINRIDDALLTFKQFEQNSAARSLPEYDNLAYNLGYAYFKKKNYNQATKYFSQFTQSGT 532
Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI---GRYYLKRGEYVA 208
+ M YM + S Y Y K+ Y
Sbjct: 533 DDNVRKMDAYMRLGDSHFIESEYWPAMEAYNAAIAMPGGNKDYATFQKSISYGFVDRNAQ 592
Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
I + + + ++A+ L YVA + + + P+ +A +
Sbjct: 593 KIEGLSNFANVFPQSSYRDDALYELGNTYVATGDNERGIQAYDRLVREIPKSKFAAKAQ 651
Score = 40.5 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 26/215 (12%), Positives = 58/215 (26%), Gaps = 13/215 (6%)
Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF-----------V 103
+ Y+ + K+ ++ A FN+ L A+
Sbjct: 277 WSNTDYYQLGYAYYKQGDYDSAIGEFNKIIDGKNSVAQNAYYHLADAYLKTGKKQEALNA 336
Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
+A + + E+ Y + Y + D + + +
Sbjct: 337 FRNAYQMDFEPKIKEDSGLNYTKLSYEIGNAYEPAPQAIGNYLEQYPDTPERQQLQTLLI 396
Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKE--VEIGRYYLKRGEYVAAIPRFQLVLANYS 221
N +++A ++ G G+Y AI F+ L+
Sbjct: 397 DSYITSKNYEGAMELIENNRNFEDKVAYQKVAFYRGIELYNDGDYQEAIINFEKSLSEPR 456
Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
E A+ E+ + +D+A ++
Sbjct: 457 TPEFTARALYWKAESEYTINRIDDALLTFKQFEQN 491
Score = 40.2 bits (91), Expect = 0.30, Method: Composition-based stats.
Identities = 28/210 (13%), Positives = 61/210 (29%), Gaps = 23/210 (10%)
Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
+ Y Y + K++N+++A +YF+Q ++ V + M +
Sbjct: 496 SLPEYDNLAYNLGYAYFKKKNYNQATKYFSQFTQSGTDDNVRKMDAYMRLGDSHFIESEY 555
Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
A P ++ +S +
Sbjct: 556 WPAMEAYNAAIAMPGGNKD---------YATFQKSISYGFVDRNAQKIEGLSNFANVFPQ 606
Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231
S Y A + E+G Y+ G+ I + ++ ++ A +A
Sbjct: 607 SSYRDDALY--------------ELGNTYVATGDNERGIQAYDRLVREIPKSKFAAKAQL 652
Query: 232 RLVEAYVALALMDEAREVVSLIQERYPQGY 261
+ Y + D+A + + + YP
Sbjct: 653 KKALIYDNTSRSDQALNLFKRVAQDYPGTP 682
>gi|309379699|emb|CBX21688.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 237
Score = 46.7 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 22/60 (36%)
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
+ G + I + D+ A EAM ++ E L D AR + + YP
Sbjct: 166 RMGNCESVIEIGGRYANRFKDSPTAPEAMFKIGECQYRLQQKDIARATWRSLIQAYPGSP 225
>gi|160884096|ref|ZP_02065099.1| hypothetical protein BACOVA_02072 [Bacteroides ovatus ATCC 8483]
gi|156110438|gb|EDO12183.1| hypothetical protein BACOVA_02072 [Bacteroides ovatus ATCC 8483]
Length = 1005
Score = 46.7 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 34/222 (15%), Positives = 70/222 (31%), Gaps = 22/222 (9%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
+ Y Y + +++++A YF + + + + + +
Sbjct: 502 QPNNEMYALANYNLGYIAFHRKDYTQASNYFQKYVQLEKG--------ENATALADAYNR 553
Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
+ + + G + V Q+ + ++R+V +Y
Sbjct: 554 IGDCHLHVRNFEEAKQYYSQAEQMNTSSGDYSFYQLALVSGLQKDYTGKITLLNRLVGKY 613
Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
SPY E GR Y+ AI F+ +L Y ++ + +A
Sbjct: 614 PASPY--------------AVNAIYEKGRSYVLMDNNNQAITSFKELLTKYPESPVSRKA 659
Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
A + Y ++A E + E+YP AR +K
Sbjct: 660 AAEIGLLYYQKGDYNQAIEAYKQVIEKYPGSEEARLAMRDLK 701
Score = 45.9 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 26/245 (10%), Positives = 59/245 (24%), Gaps = 18/245 (7%)
Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKS 96
+ R + Q+ +++ +F +A +Y NQ +
Sbjct: 415 KSIDRIAKPSAQILEAKQKILFQLGTQSFANADFEQALKYLNQSIAIGQYNRQTKADAYY 474
Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
++ + S +T P ++ Y +G K
Sbjct: 475 WCGESYYRLSRMVEAARDFNAYLQLTTQPNNEMYALANYNLGYIAFHRKDYTQASNYFQK 534
Query: 157 --------------LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
+ N K
Sbjct: 535 YVQLEKGENATALADAYNRIGDCHLHVRNFEEAKQYYSQAEQMNTSSGDYSFYQLALVSG 594
Query: 203 -RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
+ +Y I ++ Y + +A A+ +YV + ++A + +YP+
Sbjct: 595 LQKDYTGKITLLNRLVGKYPASPYAVNAIYEKGRSYVLMDNNNQAITSFKELLTKYPESP 654
Query: 262 WARYV 266
+R
Sbjct: 655 VSRKA 659
Score = 43.6 bits (100), Expect = 0.031, Method: Composition-based stats.
Identities = 32/262 (12%), Positives = 71/262 (27%), Gaps = 19/262 (7%)
Query: 19 LYK-FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
+ K I +I ++G+ + + D+ +Y++ +E+N++ A
Sbjct: 1 MKKEITRLICAAICCTPIIGFAQTGDKFTSTDN---------LYKEGKELFQEKNYAAAL 51
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
+ P A + + + M Y + L + L
Sbjct: 52 PALKAFVKQKPAASLLQDAEYMLVSSAYELKDKNRIELLRKYLDRYPDTPYANRIYALLA 111
Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSR-----IVERYTNSPYVKGARFYVTVGRNQLAAK 192
+ + D + + + + T R A
Sbjct: 112 SCYFYEGKYDEALALFNSADLDLLGNEERDDCTYQLATCYLKTDNLREAAIWFETLRANS 171
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANY----SDAEHAEEAMARLVEAYVALALMDEARE 248
R+ L + D+++ + E YV L D+A+
Sbjct: 172 PKYAKDCDYYLSYIRYTQKRYTEALKGFLPLQDDSKYKTLVPYYIAEIYVQLKNYDKAQI 231
Query: 249 VVSLIQERYPQGYWARYVETLV 270
V YP +A + ++
Sbjct: 232 VAQNYLSAYPNNEYAAEMYRIL 253
Score = 36.3 bits (81), Expect = 4.9, Method: Composition-based stats.
Identities = 31/224 (13%), Positives = 72/224 (32%), Gaps = 16/224 (7%)
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
Y A ++++ +N+ KA +P A + + V Y G+Y QA Y
Sbjct: 214 YYIAEIYVQLKNYDKAQIVAQNYLSAYPNNEYAAEMYRILGDVYYHFGQYHQAVEAFNNY 273
Query: 121 ITQYPESKNVDYVYY----LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
+ + + D +Y + L + + + +
Sbjct: 274 LNKDRSAPRRDALYMLGLSYYQTKVYSKAAETLGKVTTDNDALTQNAYLHMGLSYLQLAE 333
Query: 177 GARFYV----------TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
+ + + + AA + + + ++ F+ L + + +A
Sbjct: 334 KNKARMAFEQAAASNANMQIKEQAAYNYALCLHETSFSAFGESVTAFEKFLNEFPTSPYA 393
Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
E+ + LVE Y+ D A + + I + P + ++
Sbjct: 394 EKVSSYLVEVYMNTRSYDAALKSIDRIAK--PSAQILEAKQKIL 435
Score = 36.3 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 26/218 (11%), Positives = 59/218 (27%), Gaps = 22/218 (10%)
Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
S +++ ++ E +L+ ++ ++++A E + Q +P + AR ++
Sbjct: 639 AITSFKELLTKYPESPVSRKAAAEIGLLYYQKGDYNQAIEAYKQVIEKYPGSEEARLAMR 698
Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
+ + + A+L N + + +
Sbjct: 699 DLKSIYVDLNRIDEFAALANAMPGHIRFDANEQDSLTYAAAEKIYARGRMEEAKTSLNKY 758
Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
LQ + + I L
Sbjct: 759 LQTF----------------------PEGAFSLNAHYYLCLIGNEQKNYDMILLHSGKLL 796
Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
Y + AEEA+ E M EA +++E+
Sbjct: 797 EYPNNPFAEEALILRAEVQFNQQNMAEALASYKMLKEK 834
>gi|1679748|gb|AAB62979.1| Tgl protein [Myxococcus xanthus]
Length = 241
Score = 46.7 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 20/239 (8%), Positives = 51/239 (21%), Gaps = 16/239 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+++ + + G + + R Y+ A+ + A
Sbjct: 1 MFRLSTASCSLALLLVSSGCSHTPTEK-------EKRSAEIHYDLALQAQQAGELQDALR 53
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
++ P A ++ + + + + + +
Sbjct: 54 ELQVSLKNDPDYPDANNAMGILLHLAFRRPDEAVKHYTKALEVRPDFSEARTNLANVHLD 113
Query: 139 MSYA------QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
+ + + + +
Sbjct: 114 QGRYDDAIKLYELVLNDMLYPTPFIAQGNLGWAYYKKGEPDRAVESIKAAVTTNPNFCLG 173
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
+G Y + G A +F N D EA R L +D A+ +
Sbjct: 174 YKNLGLIYDETGRTSEACRQFTHYRENCPD---VAEAYMREGVCQAKLGQVDAAKAAFA 229
>gi|300867207|ref|ZP_07111870.1| Lytic transglycosylase, catalytic [Oscillatoria sp. PCC 6506]
gi|300334821|emb|CBN57036.1| Lytic transglycosylase, catalytic [Oscillatoria sp. PCC 6506]
Length = 725
Score = 46.7 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 31/222 (13%), Positives = 70/222 (31%), Gaps = 3/222 (1%)
Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
+ + + A + ++Q++ KA + + R + L + +
Sbjct: 215 ETLAQKYSAFLKPEDWEAIAFGYWEKQDYGKAAIAYAKSPRTPRNLYRKARGLWLDGKIP 274
Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
S Y+Q + + + + R + L S+
Sbjct: 275 ESKIAYKQLITEFPDGGEDTALGLIRISRLSEPKEALVYLDRAISKFPDRAPEALLDKSK 334
Query: 165 IVERYTNSPYVKGARFYVTVGRNQL---AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
I+++ + R + N A I + K G A + + + N
Sbjct: 335 ILDKQGSEKLASQTRQLLLQKYNNSDAAAELRWTIAQQAAKAGNLKIAWQQARDITNNNP 394
Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
D+ A EA + + + ++A++ RYP+ Y+A
Sbjct: 395 DSILAPEAAFWVGKWAQRIGRQEDAQKAFEYTIARYPESYFA 436
>gi|299144753|ref|ZP_07037821.1| TPR-domain containing protein [Bacteroides sp. 3_1_23]
gi|298515244|gb|EFI39125.1| TPR-domain containing protein [Bacteroides sp. 3_1_23]
Length = 1005
Score = 46.7 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 34/222 (15%), Positives = 70/222 (31%), Gaps = 22/222 (9%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
+ Y Y + +++++A YF + + + + + +
Sbjct: 502 QPNNEMYALANYNLGYIAFHRKDYTQASNYFQKYVQLEKG--------ENATALADAYNR 553
Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
+ + + G + V Q+ + ++R+V +Y
Sbjct: 554 IGDCHLHVRNFEEAKQYYSQAEQMNTSSGDYSFYQLALVSGLQKDYTGKITLLNRLVGKY 613
Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
SPY E GR Y+ AI F+ +L Y ++ + +A
Sbjct: 614 PASPY--------------AVNAIYEKGRSYVLMDNNNQAITSFKELLTKYPESPVSRKA 659
Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
A + Y ++A E + E+YP AR +K
Sbjct: 660 AAEIGLLYYQKGDYNQAIEAYKQVIEKYPGSEEARLAMRDLK 701
Score = 45.9 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 25/245 (10%), Positives = 59/245 (24%), Gaps = 18/245 (7%)
Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKS 96
+ R + Q+ +++ +F +A +Y NQ +
Sbjct: 415 KSIDRIAKPSAQILEAKQKILFQLGTQSFANADFEQALKYLNQSIAIGQYNRQTKADAYY 474
Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
++ + + +T P ++ Y +G K
Sbjct: 475 WCGESYYRLNRMVEAARDFNAYLQLTTQPNNEMYALANYNLGYIAFHRKDYTQASNYFQK 534
Query: 157 --------------LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
+ N K
Sbjct: 535 YVQLEKGENATALADAYNRIGDCHLHVRNFEEAKQYYSQAEQMNTSSGDYSFYQLALVSG 594
Query: 203 -RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
+ +Y I ++ Y + +A A+ +YV + ++A + +YP+
Sbjct: 595 LQKDYTGKITLLNRLVGKYPASPYAVNAIYEKGRSYVLMDNNNQAITSFKELLTKYPESP 654
Query: 262 WARYV 266
+R
Sbjct: 655 VSRKA 659
Score = 42.9 bits (98), Expect = 0.055, Method: Composition-based stats.
Identities = 31/262 (11%), Positives = 69/262 (26%), Gaps = 19/262 (7%)
Query: 19 LYK-FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
+ K I +I ++G+ + + D+ +Y++ +E+N++ A
Sbjct: 1 MKKEITRLICAAICCTPIIGFAQTGDKFTSTDN---------LYKEGKELFQEKNYAAAL 51
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
+ P A + + + M Y + L + L
Sbjct: 52 PALKAFVKQKPAASLLQDAEYMLVSSAYELKDKNRIELLRKYLDRYPDTPYANRIYALLA 111
Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSR-----IVERYTNSPYVKGARFYVTVGRNQLAAK 192
+ + D + + + + T R A
Sbjct: 112 SCYFYEGKYDEALALFNSADLDLLGNEERDDCTYQLATCYLKTDNLREAAIWFETLRANS 171
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANY----SDAEHAEEAMARLVEAYVALALMDEARE 248
R+ L + D+++ + E Y L D+A+
Sbjct: 172 PKYAKDCDYYLSYIRYTQKRYSEALKGFLPLQDDSKYKALVPYYIAEIYTQLKNYDKAQI 231
Query: 249 VVSLIQERYPQGYWARYVETLV 270
V YP A + ++
Sbjct: 232 VAQNYLSAYPNNEHAAEMYRIL 253
Score = 35.9 bits (80), Expect = 5.3, Method: Composition-based stats.
Identities = 26/218 (11%), Positives = 59/218 (27%), Gaps = 22/218 (10%)
Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
S +++ ++ E +L+ ++ ++++A E + Q +P + AR ++
Sbjct: 639 AITSFKELLTKYPESPVSRKAAAEIGLLYYQKGDYNQAIEAYKQVIEKYPGSEEARLAMR 698
Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
+ + + A+L N + + +
Sbjct: 699 DLKSIYVDLNRIDEFAALANAMPGHIRFDANEQDSLTYAAAEKIYARGRMEEAKTSLNKY 758
Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
LQ + + I L
Sbjct: 759 LQTF----------------------PEGAFSLNAHYYLCLIGNEQKNYDMILLHSGKLL 796
Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
Y + AEEA+ E M EA +++E+
Sbjct: 797 EYPNNPFAEEALILRAEVQFNQQNMAEALASYKMLKEK 834
Score = 35.5 bits (79), Expect = 8.0, Method: Composition-based stats.
Identities = 30/224 (13%), Positives = 70/224 (31%), Gaps = 16/224 (7%)
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
Y A ++ + +N+ KA +P A + + Y G+Y QA Y
Sbjct: 214 YYIAEIYTQLKNYDKAQIVAQNYLSAYPNNEHAAEMYRILGDAYYHFGQYHQAVEAFNNY 273
Query: 121 ITQYPESKNVDYVYY----LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
+ + + D +Y + L + + + +
Sbjct: 274 LNKDRSAPRRDALYMLGLSYYQTKVYSKAAETLGKVTTDNDALTQNAYLHMGLSYLQLAE 333
Query: 177 GARFYV----------TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
+ + + + AA + + + ++ F+ L + + +A
Sbjct: 334 KNKARMAFEQAAASNANMQIKEQAAYNYALCLHETSFSAFGESVTAFEKFLNEFPTSPYA 393
Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
E+ + LVE Y+ D A + + I + P + ++
Sbjct: 394 EKVSSYLVEVYMNTRSYDAALKSIDRIAK--PSAQILEAKQKIL 435
>gi|269139916|ref|YP_003296617.1| hypothetical protein ETAE_2571 [Edwardsiella tarda EIB202]
gi|267985577|gb|ACY85406.1| hypothetical protein ETAE_2571 [Edwardsiella tarda EIB202]
gi|304559751|gb|ADM42415.1| TPR repeat containing exported protein [Edwardsiella tarda FL6-60]
Length = 221
Score = 46.7 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 18/119 (15%), Positives = 43/119 (36%), Gaps = 14/119 (11%)
Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
++ + +++Y +S Y A +++ K+ A
Sbjct: 116 KKQNDQAISAFQTFIKQYPDSTYQPNANYWLGQLFYSKGKKD--------------DAAY 161
Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
+ +V+ NY + A E+M ++ D+A V + ++YP A+ + +
Sbjct: 162 YYAVVVKNYPKSPKAAESMYKVGVIMQEKGQTDKANAVYQQVIKQYPNSDAAKLAQKRM 220
Score = 45.6 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 14/69 (20%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
+ + AI FQ + Y D+ + A L + + + D+A +++ + YP+
Sbjct: 116 KKQNDQAISAFQTFIKQYPDSTYQPNANYWLGQLFYSKGKKDDAAYYYAVVVKNYPKSP- 174
Query: 263 ARYVETLVK 271
+ E++ K
Sbjct: 175 -KAAESMYK 182
>gi|310819959|ref|YP_003952317.1| tetratricopeptide repeat-containing protein [Stigmatella aurantiaca
DW4/3-1]
gi|309393031|gb|ADO70490.1| Tetratricopeptide repeat protein [Stigmatella aurantiaca DW4/3-1]
Length = 1109
Score = 46.7 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 26/220 (11%), Positives = 60/220 (27%), Gaps = 11/220 (5%)
Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106
D + Y+ A LF +F +A + +P VA S +
Sbjct: 588 VDKLPQDDKSPGIAYKAAELFYAHNDFPEARRRLEAIVQKWPKNEVAGFSTNLIVESFLI 647
Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
++ + I +Y + + A + + +
Sbjct: 648 DKDWRSVEEVSGRLIANKDVIDPSSELYKELVKYKLSGRFKLADQLLAAGQYDEAAKKYL 707
Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
+P + A + Y + +A+ ++ + Y +++ A
Sbjct: 708 LLVEEAPRHEFADKALNNA-----------AIAYENTRRFDSALKLYERIYREYPNSKLA 756
Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
+ A+ R+ D+A + + YP
Sbjct: 757 DAALFRVAVNAEKSYDFDKAVVNYQKLVKDYPTSQEREAA 796
Score = 39.8 bits (90), Expect = 0.38, Method: Composition-based stats.
Identities = 13/101 (12%), Positives = 27/101 (26%)
Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
+ + +L A + +I +Q ++ + D
Sbjct: 126 LAELYYERSSDEHLAALNAHEAKLQALPESETPPPEPSVNFGLSIALYQRLIQEFPDYRL 185
Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
+ A L DE+ + RYP+ +A
Sbjct: 186 NDGAWYLLGYCLEKQNQFDESHATYQQLIARYPKSRFAIEA 226
>gi|78187936|ref|YP_375979.1| putative lipoprotein [Chlorobium luteolum DSM 273]
gi|78167838|gb|ABB24936.1| putative lipoprotein [Chlorobium luteolum DSM 273]
Length = 306
Score = 46.7 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 29/236 (12%), Positives = 68/236 (28%), Gaps = 10/236 (4%)
Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
+ ++ Y A +++ + A +
Sbjct: 31 ASCSSSRPK------MSAEEQVSVAYRNATELYQKKEYENAAASLEPQLFASRATPLEDD 84
Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
L + A Y++ +Y ++ + + + Q P S + Y++ SY Q+ DQ T
Sbjct: 85 VLFLLAQSYYASKQYLLSSDMYDRLLQQVPSSPYREASRYMLAKSYEQLSPAYERDQEYT 144
Query: 156 KLMLQYMSRIVERYTNSPYVK---GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
+ ++ S + Y+ + Y + + + + G K +
Sbjct: 145 RRAIEAFSEYLAEYSLNDAASTARDLDTYSELLKIDPSRASYQRGYEAAKLAMARQDSVK 204
Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
+ + A + YV L A + Y W + ++
Sbjct: 205 YASAAIPVLHDKLGA-ATYSIATQYVKLKKYKAAAIYFENVVRNYGDTPWMKKAQS 259
>gi|154491758|ref|ZP_02031384.1| hypothetical protein PARMER_01374 [Parabacteroides merdae ATCC
43184]
gi|154087999|gb|EDN87044.1| hypothetical protein PARMER_01374 [Parabacteroides merdae ATCC
43184]
Length = 999
Score = 46.7 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 25/245 (10%), Positives = 69/245 (28%), Gaps = 18/245 (7%)
Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99
+ ++ + + Q +++ A F+Q + + AR
Sbjct: 411 KSINKIKHPSTKILEAKQDILFQLGTQAFANVKLDDAVSLFSQAIQLGSYNMEARNDAYF 470
Query: 100 S---AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
++ + + + T+ + YY +G SY ++ R +
Sbjct: 471 WRGESYYRMGEYENAISDYRTYLNNTRQRNTDMYALAYYNLGYSYFKLRDYSAALNRFRQ 530
Query: 157 --------------LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
+ + + + + + L
Sbjct: 531 YVDLESNRQAASLADAYNRIGDCLYQNRQFSLAEENYSRAAQLSPSAGDYSIYQKGFLLG 590
Query: 203 -RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
+ +Y I +++ Y ++++ ++A+ +YV L A + + +P
Sbjct: 591 LQKDYKGKISAMDRLISEYPESQYVDDALFEKGRSYVLLENSSSAAQAFEKLIREFPLSS 650
Query: 262 WARYV 266
AR
Sbjct: 651 LARKA 655
Score = 45.9 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 36/220 (16%), Positives = 61/220 (27%), Gaps = 22/220 (10%)
Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
Y Y + K +++S A F Q A + + Q
Sbjct: 500 NTDMYALAYYNLGYSYFKLRDYSAALNRFRQYVDLESNRQAASLADAYNRIGDCLYQNRQ 559
Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
+ + DY Y G + M R++ Y
Sbjct: 560 FSLAEENYSRAAQLSPSAGDYSIYQKGFLLGLQKDYKGK--------ISAMDRLISEYPE 611
Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231
S YV A F E GR Y+ +A F+ ++ + + A +A
Sbjct: 612 SQYVDDALF--------------EKGRSYVLLENSSSAAQAFEKLIREFPLSSLARKAGI 657
Query: 232 RLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+L Y ++A + YP A+ +K
Sbjct: 658 QLGLLYYNDNQPEKALAAYKQVISNYPGSEEAKIALQDLK 697
Score = 39.8 bits (90), Expect = 0.42, Method: Composition-based stats.
Identities = 25/234 (10%), Positives = 74/234 (31%), Gaps = 15/234 (6%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
+ ++ Y A ++ + + K + + +P + + + Y G
Sbjct: 200 KESPKYREQSQYYIAQIYFIQSKYEKVVKEGEELLSLYPDSKNNSEMYRIVGDSYYHLGD 259
Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
++A + +Y++ D V + T +++ Y
Sbjct: 260 QEKAIRMLSKYVSSTENPLRSDLYILGVCYFNKGNYSNTVNALSRTVRQNDELTQNAYLY 319
Query: 170 TNSPYVKGARFYV-------------TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
Y+K ++A + + + ++ F+
Sbjct: 320 LGQSYLKLGDKNNARMAFEAAATSSFDKQIKEVAMYNYALLIHETAFTGFGESVTIFEDF 379
Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
L ++ ++++A++ LVE Y+ + A + ++ I+ P + ++
Sbjct: 380 LNDFPNSQYADKVNDYLVEVYLTTKNYEAALKSINKIKH--PSTKILEAKQDIL 431
Score = 38.6 bits (87), Expect = 0.87, Method: Composition-based stats.
Identities = 16/228 (7%), Positives = 53/228 (23%), Gaps = 11/228 (4%)
Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
++ + +N++ + + A + +++ M + Y G+
Sbjct: 24 QFDAPDRLFVEGKELFSLKNYAGCIDKLEAYKQHSTNADLIQEADYMLVYAAYEQGRPNA 83
Query: 113 AASLGEEYITQYPESKNVDYVYY----------LVGMSYAQMIRDVPYDQRATKLMLQYM 162
L + + + Y + D+ +
Sbjct: 84 DELLKDYLEEYPASRHSDEIGYMIGSVHFKRGEYEKAIFWFNEADIDMLSPEQQEAYS-F 142
Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
K ++ + + KE
Sbjct: 143 RLAYSLLQTGEMEKARGYFARIEQVGDKYKEASTYYVAYIDYAMGNYNNALIEFSRLKES 202
Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
++ E++ + + Y + ++ + + YP + +V
Sbjct: 203 PKYREQSQYYIAQIYFIQSKYEKVVKEGEELLSLYPDSKNNSEMYRIV 250
>gi|302608154|emb|CBW44426.1| conserved hypothetical protein, putative exported protein
[Marinobacter hydrocarbonoclasticus]
Length = 258
Score = 46.7 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 34/258 (13%), Positives = 72/258 (27%), Gaps = 11/258 (4%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K + L G S + + ++ +A L +
Sbjct: 1 MRKQLMAAVLIPLGLGLAGVAHAQSSTPAFQNNSSEAQRKAGNNQATAEL-----FYMIQ 55
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+ RD ++ + Q + E +
Sbjct: 56 QLQREVRDLRGQVEEQQHQIGRLQQQGRDRYVDLDQRILELSKAVESGASAAQQSAAAGA 115
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA------AK 192
+ + ++ + + + I++ N A + +
Sbjct: 116 SADSGRLKPTRVYRSPEPEEQKTYNDIIDLIRNKKDYDTAITRLYEFVDTYPEGDLTVNA 175
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+G YL + + A F +V YSD A +A+ +L L DEAR ++
Sbjct: 176 YYWLGEVYLAKPQLEQARQAFTIVATRYSDHRKAPDAVYKLGVTLDRLGEKDEARRRMTS 235
Query: 253 IQERYPQGYWARYVETLV 270
+ E+YP A + +
Sbjct: 236 VVEQYPDSGAAELAKKYL 253
>gi|242310689|ref|ZP_04809844.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489]
gi|239523087|gb|EEQ62953.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489]
Length = 318
Score = 46.7 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 15/105 (14%), Positives = 34/105 (32%)
Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
+ G + A +G +G Y AI ++ Y A++
Sbjct: 211 LLEEKKYKLADEYLQTAIKGYYKPARGNYLLGEIAFAQGRYEEAIYYYKTSATRYDKADY 270
Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
M +++ + + A++ + + YP A+ L+
Sbjct: 271 MPRLMLNSAKSFEKINDKENAKKFLESLIALYPDSNEAKEAGNLL 315
>gi|300722399|ref|YP_003711685.1| hypothetical protein XNC1_1422 [Xenorhabdus nematophila ATCC 19061]
gi|297628902|emb|CBJ89485.1| putative periplasmic protein contains a protein prenylyltransferase
domain [Xenorhabdus nematophila ATCC 19061]
Length = 256
Score = 46.7 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 18/120 (15%), Positives = 43/120 (35%), Gaps = 14/120 (11%)
Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
+ + + V+ Y S Y+ A +++ K+ A
Sbjct: 148 NTKEYDKAIASFQGFVKTYPKSKYLSNANYWLGQLNYNKGKKD--------------DAA 193
Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
F V+ NY ++ + +++ ++ D+A+ V + ++YP A+ E +
Sbjct: 194 YYFATVVKNYPKSQKSGDSLYKVGLIMQEKGQKDKAKAVYQQVVKQYPGSNAAKMAEKKI 253
>gi|255034845|ref|YP_003085466.1| TPR repeat-containing protein [Dyadobacter fermentans DSM 18053]
gi|254947601|gb|ACT92301.1| TPR repeat-containing protein [Dyadobacter fermentans DSM 18053]
Length = 1019
Score = 46.7 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 23/209 (11%), Positives = 56/209 (26%), Gaps = 22/209 (10%)
Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
+ +Y ++ ++ +S+A YF + + + +
Sbjct: 528 KSLYALGYIYYNQKKYSQALPYFRDFTNNIEGMEADMIE--------DAHARLADCYLAA 579
Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
+ Y + V + + ++ +Y S ++
Sbjct: 580 KNYNEAIRTYEQVAAKGKVDKDYALFQKARAYVYMNREAEAKRQFELLISQYPQSKHLDN 639
Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
A F + + Y AA+ F ++ + A+ R ++Y
Sbjct: 640 AYFQL--------------ADIDFQNQSYSAAVKGFTRMINEKPKSTLIPAALLRRAQSY 685
Query: 238 VALALMDEAREVVSLIQERYPQGYWARYV 266
L + ++A I Y A
Sbjct: 686 YNLQVYEQAIVDFRKILTEYSDSPSAESA 714
Score = 43.6 bits (100), Expect = 0.025, Method: Composition-based stats.
Identities = 31/207 (14%), Positives = 58/207 (28%), Gaps = 22/207 (10%)
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
Y + V+ F +A E F++ + A + + A Y + +AA+L +
Sbjct: 457 YNQGVVDFNAGRFEQAIEMFDKSLKHPIDAELFNSASFYKAESVYGLKRVDEAATLYNQI 516
Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
Y +G Y + L Y
Sbjct: 517 AKNPKAGIYARKSLYALGYIYYNQ--------KKYSQALPYFRDFTNNIEGMEADMIEDA 568
Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
+ + LAAK ++ + + + A+ + AYV +
Sbjct: 569 HARLADCYLAAKNYNEAIRTYEQVAAKGKVDK--------------DYALFQKARAYVYM 614
Query: 241 ALMDEAREVVSLIQERYPQGYWARYVE 267
EA+ L+ +YPQ
Sbjct: 615 NREAEAKRQFELLISQYPQSKHLDNAY 641
Score = 39.4 bits (89), Expect = 0.57, Method: Composition-based stats.
Identities = 33/214 (15%), Positives = 66/214 (30%), Gaps = 15/214 (7%)
Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
+++KA ++ ++A F +P + + A + + Y A
Sbjct: 601 DYALFQKARAYVYMNREAEAKRQFELLISQYPQSKHLDNAYFQLADIDFQNQSYSAAVKG 660
Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK---------LMLQYMSRIVE 167
I + P+S + SY + K + I E
Sbjct: 661 FTRMINEKPKSTLIPAALLRRAQSYYNLQVYEQAIVDFRKILTEYSDSPSAESALEGIQE 720
Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKE------VEIGRYYLKRGEYVAAIPRFQLVLANYS 221
Y+ + + V R E + R +Y AI Q L +Y
Sbjct: 721 SYSAVGRPEEFNQVLGVVRKNNPGNEKLEGVEFDNVRNLYYAEKYENAITSLQEFLKSYP 780
Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
++H +A + +Y ++EA + S + +
Sbjct: 781 ASKHQYDATYFIASSYDKTNRVNEALQYYSKVVQ 814
Score = 35.9 bits (80), Expect = 6.6, Method: Composition-based stats.
Identities = 25/219 (11%), Positives = 59/219 (26%), Gaps = 9/219 (4%)
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
+ V+ ++ NF +AY+ F + + A ++ S + +
Sbjct: 203 FYAGVINYQKNNFEEAYQDFKRIEDHPYYKNEAPNWIISSLYQLKKFDELLTYGERILGS 262
Query: 121 ITQYPE---------SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
+ + Y + + + + + L Y
Sbjct: 263 QRGNTKLDDVALYVAEVYYEKGDYANAVKAYERYKRMRPGAIPPTVALHYGHAQFRNNNF 322
Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231
+ + + +G LK A+ F + + EEA
Sbjct: 323 EGAITSLKPIGNGKDSVSQYASYILGISNLKTNSLTNALTSFGNAASLDFNPVVKEEAAY 382
Query: 232 RLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
+ + L +A + ++ +YP+ LV
Sbjct: 383 NHAKVQLELGNNADAVKELNNYMAKYPESKHTEEATELV 421
>gi|327541184|gb|EGF27728.1| repeat protein [Rhodopirellula baltica WH47]
Length = 1113
Score = 46.3 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 33/217 (15%), Positives = 70/217 (32%), Gaps = 13/217 (5%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
T + + + ++ + +KA + + FP + A + L SA Y AG
Sbjct: 276 DATAEDKAYSFFRQGYAYAQDGDPTKASASYEKLLTQFPQSPYAAAATLASAQTLYQAGD 335
Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
AAS + + + ++L + RD A K S ++ +
Sbjct: 336 LPGAASRFRDVLQGTDPIAATESAHWLARIDLGIANRDPSKTAEAAKSAYDVASELIAKG 395
Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
+ +A K L+ A ++Q + + +SD A A
Sbjct: 396 PQGSF-------------AVALKLDAAEALSLQPDRLNDAFEQYQSIASEHSDHPLAPRA 442
Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
+ + L ++A ++ + ++ A
Sbjct: 443 LYNAAFVALQLGNTEQAVKLADSFESKFSSDPLAPDA 479
Score = 44.8 bits (103), Expect = 0.012, Method: Composition-based stats.
Identities = 34/223 (15%), Positives = 64/223 (28%), Gaps = 22/223 (9%)
Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
+++ + + Y+ L EQ ++ A EYF AG+ +
Sbjct: 614 KELIRSNGESRMADQARYKLGQLANGEQQYAAAIEYFEPILASKRDAGLLPFARYAKGMA 673
Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
+ + ++++AA E I Q P+ D L
Sbjct: 674 ELQSQQHERAAESFSELIDQNPDHTLSDDA----------------------LLSRGIAH 711
Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
R + R +S A N L E+ + V A Q ++ D
Sbjct: 712 RHLNREADSRNDLNAYLDSKPTGNNLGHALYELALLDQNASQTVQAAESLQRIVDEVPDY 771
Query: 224 EHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
++ + L + D+A + +YP
Sbjct: 772 PDMDKVLYELGWSLRESGKDDQALTKFEQLIAKYPDNALVADA 814
Score = 44.0 bits (101), Expect = 0.025, Method: Composition-based stats.
Identities = 24/229 (10%), Positives = 63/229 (27%), Gaps = 10/229 (4%)
Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
+ + Y + + A + F + + KSL
Sbjct: 797 KFEQLIAKYPDNALVADAAYFVGQDHYRNSKWGDAADAFKIAADKSNDLDLKEKSLYRLG 856
Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
+ Y KY +A + + + + + ++G S + + + TK
Sbjct: 857 WCFYKQQKYAEAEAAFKRQYVEVQQGGLLLDSMMMIGESRFKQEQYETALRAYTKA---- 912
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
+ R + G+ + G+Y AI + + +
Sbjct: 913 -----REKIEADNDSAKTVRDKAERQVRELILLHGGQSAAQLGQYEDAIGWYDALRERFP 967
Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
+ + + A ++A + S + + + + A ++
Sbjct: 968 ATTYLPQVFYEIGFAAQNAGDDEKALKFYSEVADNF-RSEIAARARFMM 1015
Score = 39.4 bits (89), Expect = 0.50, Method: Composition-based stats.
Identities = 31/208 (14%), Positives = 68/208 (32%), Gaps = 10/208 (4%)
Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
+ + S ++ +Y F K+Q +++A F + + G+ S++
Sbjct: 831 AADAFKIAADKSNDLDLKEKSLYRLGWCFYKQQKYAEAEAAFKRQYVEVQQGGLLLDSMM 890
Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
M ++ +Y+ A + + + + + + Q A +
Sbjct: 891 MIGESRFKQEQYETALRAYTKAREKIEADNDSAKTVRDKAERQVRELILLHGGQSAAQ-- 948
Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
+ +Y ++ A L EIG G+ A+ + V
Sbjct: 949 -------LGQYEDAIGWYDALRERFPATTYLPQVFYEIGFAAQNAGDDEKALKFYSEVAD 1001
Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEA 246
N+ +E A A + E + A D+A
Sbjct: 1002 NF-RSEIAARARFMMGEIHFANKTFDKA 1028
>gi|298480096|ref|ZP_06998295.1| TPR-domain containing protein [Bacteroides sp. D22]
gi|298273905|gb|EFI15467.1| TPR-domain containing protein [Bacteroides sp. D22]
Length = 1005
Score = 46.3 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 34/222 (15%), Positives = 69/222 (31%), Gaps = 22/222 (9%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
+ Y Y + ++++ A YF + + + + + +
Sbjct: 502 QPNNEMYALANYNLGYIAFHRKDYTLASNYFQKYIQLEKG--------ENATALADAYNR 553
Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
+ + + G + V Q+ + ++R+V +Y
Sbjct: 554 IGDCHLHVRNFEEAKQYYSQAEQMNTSSGDYSFYQLALVSGLQKDYTGKITLLNRLVGKY 613
Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
SPY E GR Y+ AI F+ +L Y ++ + +A
Sbjct: 614 PASPY--------------AVNAIYEKGRSYVLMDNNNQAITSFKELLTKYPESPVSRKA 659
Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
A + Y ++A E + E+YP AR +K
Sbjct: 660 AAEIGLLYYQKGDYNQAIEAYKQVIEKYPGSEEARLAMRDLK 701
Score = 45.6 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 25/245 (10%), Positives = 59/245 (24%), Gaps = 18/245 (7%)
Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKS 96
+ R + Q+ +++ +F +A +Y NQ +
Sbjct: 415 KSIDRIAKPSAQILEAKQKILFQLGTQSFANADFEQALKYLNQSIAIGQYNRQTKADAYY 474
Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
++ + + +T P ++ Y +G K
Sbjct: 475 WCGESYYRLNRMVEAARDFNAYLQLTTQPNNEMYALANYNLGYIAFHRKDYTLASNYFQK 534
Query: 157 --------------LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
+ N K
Sbjct: 535 YIQLEKGENATALADAYNRIGDCHLHVRNFEEAKQYYSQAEQMNTSSGDYSFYQLALVSG 594
Query: 203 -RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
+ +Y I ++ Y + +A A+ +YV + ++A + +YP+
Sbjct: 595 LQKDYTGKITLLNRLVGKYPASPYAVNAIYEKGRSYVLMDNNNQAITSFKELLTKYPESP 654
Query: 262 WARYV 266
+R
Sbjct: 655 VSRKA 659
Score = 42.9 bits (98), Expect = 0.046, Method: Composition-based stats.
Identities = 32/261 (12%), Positives = 70/261 (26%), Gaps = 19/261 (7%)
Query: 19 LYK-FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
+ K I +I ++G+ + + D+ +Y++ +E+N++ A
Sbjct: 1 MKKEITRLICAAICCTPIIGFAQTGDKFTSTDN---------LYKEGKELFQEKNYAAAL 51
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
+ P A + + + M Y + L + L
Sbjct: 52 PALKAFVKQKPAASLLQDAEYMLVSSAYELRDKNRIELLRKYLDRYPDTPYANRIYALLA 111
Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSR-----IVERYTNSPYVKGARFYVTVGRNQLAAK 192
+ + D + + + + T R A
Sbjct: 112 SCYFYEEKYDEALALFNSADLDLLGNEERDDCTYQLATCYLKTDNLREAAIWFETLRANS 171
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANY----SDAEHAEEAMARLVEAYVALALMDEARE 248
R+ L + D+++ + E YV L D+A+
Sbjct: 172 PKYAKDCDYYLSYIRYTQKRYSEALKGFLPLQDDSKYKALVPYYIAEIYVQLKNYDKAQI 231
Query: 249 VVSLIQERYPQGYWARYVETL 269
V YP +A + +
Sbjct: 232 VAQNYLSAYPNNEYAAEMYRI 252
Score = 37.1 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 31/224 (13%), Positives = 72/224 (32%), Gaps = 16/224 (7%)
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
Y A ++++ +N+ KA +P A + + V Y G+Y QA Y
Sbjct: 214 YYIAEIYVQLKNYDKAQIVAQNYLSAYPNNEYAAEMYRIQGDVYYHFGQYHQAVEAFNNY 273
Query: 121 ITQYPESKNVDYVYY----LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
+ + + D +Y + L + + + +
Sbjct: 274 LNKDHSAPRRDALYMLGLSYYQTKVYSKAAETLGKVTTDNDALTQNAYLHMGLSYLQLAE 333
Query: 177 GARFYV----------TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
+ + + + AA + + + ++ F+ L + + +A
Sbjct: 334 KNKARMAFEQAAASNANMQIKEQAAYNYALCLHETSFSAFGESVTAFEKFLNEFPTSPYA 393
Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
E+ + LVE Y+ D A + + I + P + ++
Sbjct: 394 EKVSSYLVEVYMNTRSYDAALKSIDRIAK--PSAQILEAKQKIL 435
Score = 35.9 bits (80), Expect = 5.3, Method: Composition-based stats.
Identities = 26/218 (11%), Positives = 59/218 (27%), Gaps = 22/218 (10%)
Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
S +++ ++ E +L+ ++ ++++A E + Q +P + AR ++
Sbjct: 639 AITSFKELLTKYPESPVSRKAAAEIGLLYYQKGDYNQAIEAYKQVIEKYPGSEEARLAMR 698
Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
+ + + A+L N + + +
Sbjct: 699 DLKSIYVDLNRIDEFAALANAMPGHIRFDANEQDSLTYAAAEKIYARGRMEEAKTSLNKY 758
Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
LQ + + I L
Sbjct: 759 LQTF----------------------PEGAFSLNAHYYLCLIGNEQKNYDMILLHSGKLL 796
Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
Y + AEEA+ E M EA +++E+
Sbjct: 797 EYPNNPFAEEALILRAEVQFNQQNMAEALASYKMLKEK 834
>gi|295096554|emb|CBK85644.1| tol-pal system protein YbgF [Enterobacter cloacae subsp. cloacae
NCTC 9394]
Length = 165
Score = 46.3 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 19/121 (15%), Positives = 41/121 (33%), Gaps = 14/121 (11%)
Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
D+ + V++Y +S Y A +++ K+ A
Sbjct: 55 QDKSRQDDAIVAFQNFVKKYPDSTYQPNANYWLGQLNYNKGKKD--------------DA 100
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
F V+ NY + A +AM ++ +A+ V + ++P A+ +
Sbjct: 101 AFYFASVVKNYPKSPKAPDAMYKVGVIMQDKGDTAKAKAVYQQVVAKFPGTDGAKQAQKR 160
Query: 270 V 270
+
Sbjct: 161 L 161
Score = 45.2 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 23/74 (31%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ AI FQ + Y D+ + A L + D+A +
Sbjct: 47 YNAAIALVQDKSRQDDAIVAFQNFVKKYPDSTYQPNANYWLGQLNYNKGKKDDAAFYFAS 106
Query: 253 IQERYPQGYWARYV 266
+ + YP+ A
Sbjct: 107 VVKNYPKSPKAPDA 120
>gi|317051708|ref|YP_004112824.1| tetratricopeptide repeat-containing protein [Desulfurispirillum
indicum S5]
gi|316946792|gb|ADU66268.1| Tetratricopeptide TPR_1 repeat-containing protein
[Desulfurispirillum indicum S5]
Length = 917
Score = 46.3 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 19/194 (9%), Positives = 49/194 (25%), Gaps = 2/194 (1%)
Query: 60 VYEKAVLFLKEQNFSKAYEYFNQC-SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
++E A L N +A + + + S + + + + L
Sbjct: 455 LFESAKASLLIGNLERAAQLYAEIPSSSAYYTSARFHLANLHTQRERYEEAERIYRDLLR 514
Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
+ ++ +Y G + A + ++ +
Sbjct: 515 RQYREDDVRISLAILYNNWGRYQQVLDTVTESSGAAVRQRGHAFLKLGHYQEATRSYFLC 574
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS-DAEHAEEAMARLVEAY 237
R +Y + + + DA + E A+ + +A+
Sbjct: 575 RQRFDESSADYLECTFFQALSMFHAQDYDRTLMVLERFQERFEADAYYRERALRLMGDAH 634
Query: 238 VALALMDEAREVVS 251
D A+ +
Sbjct: 635 YNAGRYDRAQRYYA 648
Score = 37.1 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 20/204 (9%), Positives = 49/204 (24%), Gaps = 17/204 (8%)
Query: 47 YLDSVTDVRYQREVYEK------AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
L+ + Y + + +A Y+ + S + S
Sbjct: 608 VLERFQERFEADAYYRERALRLMGDAHYNAGRYDRAQRYYARVS-----SDSFHSGYFNS 662
Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
+Q + + S + + + S Y+ ++ +
Sbjct: 663 LIMQDRFREVETYVSEHQASMDRATLSSAYAYLSRKYVELGDYQRAQSHVERIGDRDAFV 722
Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220
+R++ + + R F +
Sbjct: 723 GFARVLLERGEY----DFVVRFAAQHREQHPQLRYYLGMAYLRQGNYRDAYLFLQQMLEN 778
Query: 221 SDAEHAEEAMARLVEAYVALALMD 244
+ + E+A +EA +AL D
Sbjct: 779 PN--YREQARHHAIEASMALGTPD 800
>gi|218886421|ref|YP_002435742.1| hypothetical protein DvMF_1325 [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218757375|gb|ACL08274.1| TPR repeat-containing protein [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 1122
Score = 46.3 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 24/206 (11%), Positives = 59/206 (28%), Gaps = 15/206 (7%)
Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
D + V E+ E+A F+ ++ KA E + + ++
Sbjct: 453 DEKGNPVPAPPVPAELLEQAKTFMVNADYPKALELL-ETLKGLRDTPKDMYEEVLYLIGD 511
Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
+ + + I + + + ++ Y +
Sbjct: 512 VLYAQNKDNILPVFDKIITATSEAMNYNLKSHRVPQALLRLGLLNTRIGNSQEAEGYFNL 571
Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
+ +Y A G KRG+Y A +FQ ++ ++ +++
Sbjct: 572 LRRQYP--------------HDENAALAMYYAGEEAYKRGDYQKAADKFQSIVQDFPESK 617
Query: 225 HAEEAMARLVEAYVALALMDEAREVV 250
+ E L + +A ++
Sbjct: 618 YVREGSVSLARTLYKMGYYQQAASIL 643
Score = 44.8 bits (103), Expect = 0.013, Method: Composition-based stats.
Identities = 25/248 (10%), Positives = 58/248 (23%), Gaps = 29/248 (11%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR-------KSLLMSAFV 103
D +Y K ++ KA + F +DFP + R ++L +
Sbjct: 577 PHDENAALAMYYAGEEAYKRGDYQKAADKFQSIVQDFPESKYVREGSVSLARTLYKMGYY 636
Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY-- 161
Q +A + +YP+ V +
Sbjct: 637 QQAASILDFVDKRWGRFYLEYPQLLTVAADVSDHLGKLDDARANYWLYYNLNPEADDIDT 696
Query: 162 -----------------MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY---L 201
+ E K + + +
Sbjct: 697 VLARQGDILAKQKQPEAARVLYEEAVRRFPDKDGGLISLMRLAEEGIHDTPSIAEMISVF 756
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
++ + + + +++ + + A +L Y+ EA + +P
Sbjct: 757 QKPDNTRPVQAYTTIISGHPQSPLVPLARLKLTMWYLWNRQFPEALASAVEFAQAHPGSD 816
Query: 262 WARYVETL 269
V +
Sbjct: 817 MLPKVREI 824
Score = 43.2 bits (99), Expect = 0.040, Method: Composition-based stats.
Identities = 16/103 (15%), Positives = 33/103 (32%)
Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
I+ + + +++ + +G + G A F L+ Y
Sbjct: 519 DNILPVFDKIITATSEAMNYNLKSHRVPQALLRLGLLNTRIGNSQEAEGYFNLLRRQYPH 578
Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
E+A AM E +A + I + +P+ + R
Sbjct: 579 DENAALAMYYAGEEAYKRGDYQKAADKFQSIVQDFPESKYVRE 621
>gi|94987495|ref|YP_595428.1| hypothetical protein LI1053 [Lawsonia intracellularis PHE/MN1-00]
gi|94731744|emb|CAJ55107.1| uncharacterized protein conserved in bacteria [Lawsonia
intracellularis PHE/MN1-00]
Length = 305
Score = 46.3 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 15/131 (11%), Positives = 39/131 (29%), Gaps = 5/131 (3%)
Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE-----VEIGRYY 200
+ V+ + Y + + + K G
Sbjct: 172 QPKQSTPNKIDTATVLYDTGVKLFNERKYKEALQSFTDFTNTYGTHKLISNAWFWRGEAN 231
Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
+ G Y AA ++ V++ Y + + + D A+ + + +++P
Sbjct: 232 YQLGSYPAAALDYEQVISKYPKSGKIVSCYFKQALCFYKTGKKDAAKFRLEEVIKKFPTS 291
Query: 261 YWARYVETLVK 271
A+ + ++K
Sbjct: 292 PEAKRAKQILK 302
Score = 35.9 bits (80), Expect = 6.6, Method: Composition-based stats.
Identities = 20/135 (14%), Positives = 45/135 (33%), Gaps = 8/135 (5%)
Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
Q++ + + +Y+ V E+ + +A + F + + + +
Sbjct: 166 GAQTNSQPKQSTPNKIDTATVLYDTGVKLFNERKYKEALQSFTDFTNTYGTHKLISNAWF 225
Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
Y G Y AA E+ I++YP+S +S Y
Sbjct: 226 WRGEANYQLGSYPAAALDYEQVISKYPKSGK--------IVSCYFKQALCFYKTGKKDAA 277
Query: 159 LQYMSRIVERYTNSP 173
+ +++++ SP
Sbjct: 278 KFRLEEVIKKFPTSP 292
>gi|295132712|ref|YP_003583388.1| tetratricopeptide repeat protein [Zunongwangia profunda SM-A87]
gi|294980727|gb|ADF51192.1| tetratricopeptide repeat protein [Zunongwangia profunda SM-A87]
Length = 1007
Score = 46.3 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 28/232 (12%), Positives = 65/232 (28%), Gaps = 16/232 (6%)
Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
+ + V YQ+ Y + +E ++ +A + F + ++ + K+ A +
Sbjct: 413 ESNRNFADKVAYQKVAYYYGLQLYEEGDYYEAIKNFEKALKEPRDPKITAKATYWKAESE 472
Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
++ + A +E+ + + + YA ++ S+
Sbjct: 473 FNVNRIDDAIIGYKEFGGMTAAAGTDEKTDLDYNIGYAYFKKNEYDRAIEYFKRYAENSQ 532
Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVE----------------IGRYYLKRGEYVA 208
N Y++ Y + A + Y
Sbjct: 533 HDAAKRNDAYLRLGDSYFVNSQYWPAMESYNAAIANGVGNADYAAFQKAISYGFVDRNER 592
Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
I + Y + ++A+ L YVA +A + P
Sbjct: 593 KIEDLSGFNSKYPRSAFRDDALYELGNTYVATNNTSQAISTYDRLIREVPGS 644
Score = 40.9 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 24/244 (9%), Positives = 49/244 (20%), Gaps = 16/244 (6%)
Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC--SRDFPFAGVARKS 96
++ + + Y KA A + +
Sbjct: 444 AIKNFEKALKEPRDPKITAKATYWKAESEFNVNRIDDAIIGYKEFGGMTAAAGTDEKTDL 503
Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
+ + +Y +A + Y YL + +
Sbjct: 504 DYNIGYAYFKKNEYDRAIEYFKRYAENSQHDAAKRNDAYLRLGDSYFVNSQYWPAMESYN 563
Query: 157 LMLQY--------------MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
+ V+R E+G Y+
Sbjct: 564 AAIANGVGNADYAAFQKAISYGFVDRNERKIEDLSGFNSKYPRSAFRDDALYELGNTYVA 623
Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
AI + ++ + +AM R Y ++A + YP
Sbjct: 624 TNNTSQAISTYDRLIREVPGSALVPKAMLRQGLIYYNSNQGEKALSKFKKVVNDYPNTPE 683
Query: 263 ARYV 266
A
Sbjct: 684 AMEA 687
Score = 39.4 bits (89), Expect = 0.51, Method: Composition-based stats.
Identities = 26/228 (11%), Positives = 66/228 (28%), Gaps = 8/228 (3%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK- 109
++ + Y + + ++ +A +YF++ D + F + K
Sbjct: 168 DSEQYGAQAKYYIGYMAYESDDYDQANQYFDEVKGDERYGKELSYYQADMNFKLGNFEKA 227
Query: 110 ------YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
+++ E+ ++ + + Q
Sbjct: 228 IQLGKEQLPKSNVVEKSQLNKIIGESYFNLKQYDQAIPYLKEYQGVRRKWNNTDYYQLGY 287
Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
++ + + + + + YL+ G+ A+ F+ DA
Sbjct: 288 AYYKQGDYANAISEFNKIIDGKNAIAQNAYYHLAQSYLESGQKQQALNAFKNASEMDFDA 347
Query: 224 EHAEEAMARLVEAYVALALMDEA-REVVSLIQERYPQGYWARYVETLV 270
+ E+AM + + E+ +V+ E YP E L+
Sbjct: 348 KIKEDAMLNYAKLGYEIGNSYESPSKVLITFLETYPNSPNKAEAEELL 395
>gi|33519800|ref|NP_878632.1| hypothetical protein Bfl340 [Candidatus Blochmannia floridanus]
gi|33504145|emb|CAD83407.1| predicted lipoprotein [Candidatus Blochmannia floridanus]
Length = 266
Score = 46.3 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 22/158 (13%), Positives = 50/158 (31%), Gaps = 14/158 (8%)
Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
+ ++ + + I + +++ L +Q ++ Y S
Sbjct: 119 SKDSQSIHLNTNITDNLIHKQSIQYDDIDYKKIVSLVLEKKQYNLAIQEFQNFIKNYPKS 178
Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232
Y A +++ K A F LV+ NY + A +A+ +
Sbjct: 179 HYQPNAHYWLGQLYYNQGHKT--------------NASYHFALVVKNYPKSIKAPDALLK 224
Query: 233 LVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
+ D+A+ + I + YP A+ + +
Sbjct: 225 IGIIMQETNQKDKAKTIYQQIGKLYPNNDAAKQAQKRL 262
>gi|153805821|ref|ZP_01958489.1| hypothetical protein BACCAC_00058 [Bacteroides caccae ATCC 43185]
gi|149130498|gb|EDM21704.1| hypothetical protein BACCAC_00058 [Bacteroides caccae ATCC 43185]
Length = 1005
Score = 46.3 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 33/222 (14%), Positives = 70/222 (31%), Gaps = 22/222 (9%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
+ Y Y + +++++A YF + + + + + +
Sbjct: 502 QPNNEMYALANYNLGYIAFHRKDYTQASNYFQKYIQLEKG--------ENTTALADAYNR 553
Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
+ + + G + V Q+ + ++R+V +Y
Sbjct: 554 IGDCHLHVRNFEEAKHYYSQAEQMNTPSGDYSFYQLALVSGLQKDYTGKITLLNRLVGKY 613
Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
SPY E GR Y+ AI F+ +L Y ++ + +A
Sbjct: 614 PASPY--------------AVNAIYEKGRSYVLMDNNNQAITSFKELLNKYPESPVSRKA 659
Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
A + + ++A E + E+YP AR +K
Sbjct: 660 AAEIGLLFYQKGDYNQAIEAYKQVIEKYPGSEEARLAMRDLK 701
Score = 46.3 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 29/249 (11%), Positives = 61/249 (24%), Gaps = 12/249 (4%)
Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90
+C + + + +Y++ +E+N++ A + P A
Sbjct: 8 LICATICCA---PIIGFAQTGDKFTSADNLYKEGKELFQEKNYAAALPALKAFVKQKPTA 64
Query: 91 GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY-----VYYLVGMSYAQMI 145
+ + + M Y + L + Y Y + +
Sbjct: 65 SLLQDAEYMLVSSAYELNDKNRIELLRKYLDHYPDTPYANRIYSLLASCYFYEGKYDEAM 124
Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
+ R + T R A
Sbjct: 125 ALFNSTDLDLLNNEERDDRTYQLATCYLKTNDLREAAIWFETLRANSPKYATDCDYYISY 184
Query: 206 YVAAIPRFQLVLANY----SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
R+ L + +A++ + E YV L D+A+ V YP
Sbjct: 185 IRYTQKRYNEALKGFLPLQDNAKYKALVPYYIAEIYVQLKNYDKAQIVAQNYLSAYPNNE 244
Query: 262 WARYVETLV 270
A + ++
Sbjct: 245 HAAEMYRIL 253
Score = 45.9 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 25/245 (10%), Positives = 59/245 (24%), Gaps = 18/245 (7%)
Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKS 96
+ R + Q+ +++ +F +A +Y NQ +
Sbjct: 415 KSIDRIAKPSAQILEAKQKILFQLGTQSFANADFEQALKYLNQSIAIGQYNRQTKADAYY 474
Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
++ + + +T P ++ Y +G K
Sbjct: 475 WCGESYYRLNRMVEAARDFNAYLQLTTQPNNEMYALANYNLGYIAFHRKDYTQASNYFQK 534
Query: 157 --------------LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
+ N K
Sbjct: 535 YIQLEKGENTTALADAYNRIGDCHLHVRNFEEAKHYYSQAEQMNTPSGDYSFYQLALVSG 594
Query: 203 -RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
+ +Y I ++ Y + +A A+ +YV + ++A + +YP+
Sbjct: 595 LQKDYTGKITLLNRLVGKYPASPYAVNAIYEKGRSYVLMDNNNQAITSFKELLNKYPESP 654
Query: 262 WARYV 266
+R
Sbjct: 655 VSRKA 659
Score = 36.7 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 27/218 (12%), Positives = 59/218 (27%), Gaps = 22/218 (10%)
Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
S +++ ++ E +LF ++ ++++A E + Q +P + AR ++
Sbjct: 639 AITSFKELLNKYPESPVSRKAAAEIGLLFYQKGDYNQAIEAYKQVIEKYPGSEEARLAMR 698
Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
+ + + A+L N M + + +
Sbjct: 699 DLKSIYVDLNRIDEFAALANAMPGHIRFDANEQDSLTYTAAEKIYMKGRMEEAKTSLNKY 758
Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
LQ + + I L
Sbjct: 759 LQTF----------------------PEGAFSLNAHYYLCLIGSEQKNYDMILLHSGKLL 796
Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
Y + AEEA+ E EA +++E+
Sbjct: 797 EYPNNPFAEEALILRAEVQFNQQNTAEALASYKMLKEK 834
Score = 36.3 bits (81), Expect = 4.5, Method: Composition-based stats.
Identities = 30/224 (13%), Positives = 70/224 (31%), Gaps = 16/224 (7%)
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
Y A ++++ +N+ KA +P A + + Y G+Y QA Y
Sbjct: 214 YYIAEIYVQLKNYDKAQIVAQNYLSAYPNNEHAAEMYRILGDAYYHFGQYPQAVEAFSNY 273
Query: 121 ITQYPESKNVDYVYY----LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
+ + D +Y + L + + + +
Sbjct: 274 LDREHAVPRRDALYMLGLSYYQTKVYSKAAETLGKVTTENDALTQNAYLHMGLSYLQLAE 333
Query: 177 GARFYV----------TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
+ + + + AA + + + ++ F+ L + + +A
Sbjct: 334 KNKARMAFEQAAASNANMQIKEQAAYNYALCLHETSFSAFGESVTAFEKFLNEFPTSPYA 393
Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
E+ + LVE Y+ D A + + I + P + ++
Sbjct: 394 EKVSSYLVEVYMNTRSYDAALKSIDRIAK--PSAQILEAKQKIL 435
>gi|260062000|ref|YP_003195080.1| hypothetical protein RB2501_10422 [Robiginitalea biformata
HTCC2501]
gi|88783562|gb|EAR14733.1| hypothetical protein RB2501_10422 [Robiginitalea biformata
HTCC2501]
Length = 1006
Score = 46.3 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 27/216 (12%), Positives = 60/216 (27%), Gaps = 24/216 (11%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
+ Y Y+ + K +++ A +F + +R P + + + + +Y
Sbjct: 494 ASLEEYADLDYQMGYTYFKLRDYGNAATHFQRFARSAPDGARKTDAWMRLGDSYFVSSRY 553
Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
+ A ++ + + ++ + L + R+
Sbjct: 554 RPAIEAYDQALAT-------GSPERDYAAYQKAISYGFLGQEQTKRDALDTF---IGRFP 603
Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
NS A F + Q A AI + ++ + A
Sbjct: 604 NSSLKDDALFELGNSYVQSA--------------ADNQAIASYDRLIRESPGSSLVPAAK 649
Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
R Y +A V + ++YP A
Sbjct: 650 MRKGLVYYNGGQNQQALTVFKEVADQYPNSQEAMQA 685
>gi|254805220|ref|YP_003083441.1| hypothetical protein NMO_1272 [Neisseria meningitidis alpha14]
gi|254668762|emb|CBA06648.1| conserved hypothetical protein [Neisseria meningitidis alpha14]
gi|254672437|emb|CBA05813.1| conserved hypothetical protein [Neisseria meningitidis alpha275]
Length = 237
Score = 46.3 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 14/72 (19%), Positives = 24/72 (33%)
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
+ + + G + I + D+ A EAM ++ E L D AR
Sbjct: 154 QRSMYLLLQSRARMGNCESVIEIGGRYANRFKDSPTAPEAMFKIGECQYRLQQKDIARAT 213
Query: 250 VSLIQERYPQGY 261
+ + YP
Sbjct: 214 WRSLIQAYPSSP 225
>gi|15677298|ref|NP_274452.1| hypothetical protein NMB1440 [Neisseria meningitidis MC58]
gi|7226681|gb|AAF41801.1| hypothetical protein NMB1440 [Neisseria meningitidis MC58]
gi|316984566|gb|EFV63531.1| periplasmic protein [Neisseria meningitidis H44/76]
gi|325134580|gb|EGC57224.1| putative lipoprotein [Neisseria meningitidis M13399]
gi|325140616|gb|EGC63136.1| putative lipoprotein [Neisseria meningitidis CU385]
gi|325144741|gb|EGC67036.1| putative lipoprotein [Neisseria meningitidis M01-240013]
gi|325199945|gb|ADY95400.1| putative lipoprotein [Neisseria meningitidis H44/76]
gi|325205807|gb|ADZ01260.1| putative lipoprotein [Neisseria meningitidis M04-240196]
Length = 237
Score = 46.3 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 14/72 (19%), Positives = 24/72 (33%)
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
+ + + G + I + D+ A EAM ++ E L D AR
Sbjct: 154 QRSMYLLLQSRARMGNCESVIEIGGRYANRFKDSPTAPEAMFKIGECQYRLQQKDIARAT 213
Query: 250 VSLIQERYPQGY 261
+ + YP
Sbjct: 214 WRSLIQTYPGSP 225
>gi|194337184|ref|YP_002018978.1| tol-pal system protein YbgF [Pelodictyon phaeoclathratiforme BU-1]
gi|194309661|gb|ACF44361.1| tol-pal system protein YbgF [Pelodictyon phaeoclathratiforme BU-1]
Length = 262
Score = 46.3 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 25/258 (9%), Positives = 72/258 (27%), Gaps = 8/258 (3%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+YK F + V L + V D++ ++ E K+ + + + +
Sbjct: 8 MYKKIRP-FLFLPVLALSACASKQDLLVVEDNLKKLKTDSET-IKSQSAVSYSDVQQVRD 65
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
++ + ++ S ++ + + +
Sbjct: 66 DVSRLQGSIEEISHNNRLTFGRLGMEDSLLVHKVDELELRLQKMEQYIALAKEQSPPSAA 125
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
A + ER + YV + + + + + +
Sbjct: 126 PLQQNDTVQSAQKPSALTDA-ALLEEGRERLKSKNYVASRESFGLLMQRTPPSALADQAQ 184
Query: 199 YYLKRGEYVAAIPR-----FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+++ + +Q+V+A Y + EA+ + ++ + A+ +
Sbjct: 185 FFIAESYFGEKWYEKAILEYQVVIAKYLKSNKRPEALYKQALSFEFIGDPANAKARFKDL 244
Query: 254 QERYPQGYWARYVETLVK 271
YP A ++
Sbjct: 245 VNVYPDAPQATQARKKLQ 262
>gi|189466023|ref|ZP_03014808.1| hypothetical protein BACINT_02387 [Bacteroides intestinalis DSM
17393]
gi|189434287|gb|EDV03272.1| hypothetical protein BACINT_02387 [Bacteroides intestinalis DSM
17393]
Length = 274
Score = 46.3 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 41/226 (18%), Positives = 77/226 (34%), Gaps = 15/226 (6%)
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
YE A + + +++A N+ A +SL M Y+ YQ AA +Y
Sbjct: 34 YEAAKNYFAKGQYNRAATLLNELIAILKGTDKAEESLYMLGMSYYNQKDYQTAAQSFVQY 93
Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
YP + + G + + DQ T +Q + +E + S A+
Sbjct: 94 YNVYPRGTFAELARFHAGKALYLDTPEPRLDQSGTYSAIQQLQMFMEYFPQSSKKDEAQD 153
Query: 181 YVTVGRNQLAAKEVEIGRYYLK-----RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
+ +++L KE R Y Y + + Q L +Y E+ ++
Sbjct: 154 MIFKLQDKLVMKEYLSARMYYNLGNYLGNNYQSCVITAQNALKDYPYTNLREDLSILILR 213
Query: 236 AYVALALM----DEAREVVSL------IQERYPQGYWARYVETLVK 271
A +A+ A + +P+ + + E + K
Sbjct: 214 AKYEMAIYSVEDKRAERYRETVDEYYAFKNEFPESKYMKEAEKIFK 259
>gi|94968182|ref|YP_590230.1| N-acetylmuramoyl-L-alanine amidase [Candidatus Koribacter
versatilis Ellin345]
gi|94550232|gb|ABF40156.1| N-acetylmuramoyl-L-alanine amidase [Candidatus Koribacter
versatilis Ellin345]
Length = 731
Score = 46.3 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 19/133 (14%), Positives = 45/133 (33%), Gaps = 1/133 (0%)
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
A+ +R+ Q +++E Y + A +A E GR
Sbjct: 44 YEDAEKMREALNGQPEKDRTKAAYQKVIEAYKKVYFTTPASSKADASILAVAEVMAEEGR 103
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA-LALMDEAREVVSLIQERY 257
++ + AI +++ + Y +++ +A+ + + L A+ +RY
Sbjct: 104 HFQDQKPLKDAIAQYEFLRKEYPGSKYRMDALFTIGQIQKEDLKDPAAAKATFEEFLQRY 163
Query: 258 PQGYWARYVETLV 270
P+ +
Sbjct: 164 PKSQLVDQAHKAL 176
>gi|288926047|ref|ZP_06419976.1| putative TPR domain protein [Prevotella buccae D17]
gi|288337267|gb|EFC75624.1| putative TPR domain protein [Prevotella buccae D17]
Length = 1110
Score = 46.3 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 12/51 (23%), Positives = 24/51 (47%)
Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
+ ++ NY D EH ++A L Y + + A ++ ++ YP+ W
Sbjct: 612 LRRLVDNYPDFEHLDDAYYHLFLLYSRMGMPTVAESYINKLKRGYPKSRWT 662
Score = 35.2 bits (78), Expect = 9.0, Method: Composition-based stats.
Identities = 27/267 (10%), Positives = 65/267 (24%), Gaps = 35/267 (13%)
Query: 20 YKFALTIFFSIAVCFLVGW-------------------------------ERQSSRDVYL 48
Y+ + + + G
Sbjct: 6 YRHITVLLTVVTALTIAGCGTQKNTAQSRWWQSFTARYNTYYNGSMAYIDGSLEKEQGNK 65
Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
D+ T++ V K L NF +A E + + +
Sbjct: 66 DNFTELIPLYTVGNKGSRELGLSNFQRAIEKSEKAIHQHSIKRRPEWTKSRRKTAKDIEW 125
Query: 109 KYQQAASLGEEYIT-QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
++ + ++ + ++A M R ++++
Sbjct: 126 LNRREYNPFLWKAWLLMGRAQFHSGAFDEAASTFAYMSRLYATQPAIYGRARAWLAKCYI 185
Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVE---IGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
+ + AA++ YY+ G++ AIP + V+ + +
Sbjct: 186 EQGWMYDAEDVIRNMQRDSIHWAAQKEWDYTYADYYIHSGDFGKAIPYLRKVIRHEMRRK 245
Query: 225 HAEEAMARLVEAYVALALMDEAREVVS 251
+ + Y A+ EA +
Sbjct: 246 QRAREWYLMGQLYAAIGNRQEAYKSFR 272
>gi|270295358|ref|ZP_06201559.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|270274605|gb|EFA20466.1| conserved hypothetical protein [Bacteroides sp. D20]
Length = 1014
Score = 46.3 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 27/245 (11%), Positives = 61/245 (24%), Gaps = 18/245 (7%)
Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKS 96
+ R + Q+ +++ F +A YFNQ +
Sbjct: 427 KSIDRISHPSKAILEAKQKILFQLGTQSFANTQFEQAIGYFNQSVTLGQYNLQTKADALY 486
Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
L ++ + + + +T+ +++ YY +G + R
Sbjct: 487 WLGESYYRLNRMREAARNFNEYLSLTRQRDTEMFALAYYNLGYIAFHQKDYSTAENRFRN 546
Query: 157 --------------LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL- 201
+ K V
Sbjct: 547 FVQLEKGENPTALADAYNRIGDCNLHVRRFEEAKQYYAKAENLNTPAGDYAVYQLALVYG 606
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
+ Y + + A Y ++ +A A+ +YV +A + +YP+
Sbjct: 607 MQKNYTEKVSMLDRLAAKYPNSPYAINALYEKGRSYVQSNNSRQAIATFRELLAKYPESP 666
Query: 262 WARYV 266
+R
Sbjct: 667 VSRKA 671
Score = 45.9 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 31/220 (14%), Positives = 62/220 (28%), Gaps = 22/220 (10%)
Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
+ Y + ++++S A F + + + + +
Sbjct: 516 DTEMFALAYYNLGYIAFHQKDYSTAENRFRNFVQLEKGENPTALADAYNRIGDCNLHVRR 575
Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
+ + + DY Y + + Y +L +Y +
Sbjct: 576 FEEAKQYYAKAENLNTPAGDYAVYQLALVYGMQKNYTEKVSMLDRLAAKYPN-------- 627
Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231
E GR Y++ AI F+ +LA Y ++ + +A A
Sbjct: 628 --------------SPYAINALYEKGRSYVQSNNSRQAIATFRELLAKYPESPVSRKAAA 673
Query: 232 RLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+ Y D A E + +YP AR +K
Sbjct: 674 EIGLLYYQNDDYDRAIEAYKHVVTQYPGSEEARLAMRDLK 713
Score = 37.5 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 32/213 (15%), Positives = 64/213 (30%), Gaps = 15/213 (7%)
Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
+YEK +++ N +A F + +P + V+RK+ + Y Y +A +
Sbjct: 634 ALYEKGRSYVQSNNSRQAIATFRELLAKYPESPVSRKAAAEIGLLYYQNDDYDRAIEAYK 693
Query: 119 EYITQYPESKNVDYVYYLVGMSY---------------AQMIRDVPYDQRATKLMLQYMS 163
+TQYP S+ + Y ++ + +
Sbjct: 694 HVVTQYPGSEEARLAMRDLKSIYVDANRVDEFAALAAQMPGEIRFEPSEQDSLTYIAAEK 753
Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
++ R+ + + K + A+ L Y D
Sbjct: 754 VYMKGEATPAKESFTRYLQSYPGGAFSLNAHYYLCVIGKEQKDEEAVLEHAGKLLEYPDN 813
Query: 224 EHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
++EEA+ E D A +Q +
Sbjct: 814 PYSEEALLMHGEILFNRQQYDLALADYKKLQAK 846
>gi|115374590|ref|ZP_01461869.1| tetratricopeptide repeat domain protein [Stigmatella aurantiaca
DW4/3-1]
gi|115368356|gb|EAU67312.1| tetratricopeptide repeat domain protein [Stigmatella aurantiaca
DW4/3-1]
Length = 1077
Score = 46.3 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 26/220 (11%), Positives = 60/220 (27%), Gaps = 11/220 (5%)
Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106
D + Y+ A LF +F +A + +P VA S +
Sbjct: 556 VDKLPQDDKSPGIAYKAAELFYAHNDFPEARRRLEAIVQKWPKNEVAGFSTNLIVESFLI 615
Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
++ + I +Y + + A + + +
Sbjct: 616 DKDWRSVEEVSGRLIANKDVIDPSSELYKELVKYKLSGRFKLADQLLAAGQYDEAAKKYL 675
Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
+P + A + Y + +A+ ++ + Y +++ A
Sbjct: 676 LLVEEAPRHEFADKALNNA-----------AIAYENTRRFDSALKLYERIYREYPNSKLA 724
Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
+ A+ R+ D+A + + YP
Sbjct: 725 DAALFRVAVNAEKSYDFDKAVVNYQKLVKDYPTSQEREAA 764
Score = 39.8 bits (90), Expect = 0.44, Method: Composition-based stats.
Identities = 13/101 (12%), Positives = 27/101 (26%)
Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
+ + +L A + +I +Q ++ + D
Sbjct: 94 LAELYYERSSDEHLAALNAHEAKLQALPESETPPPEPSVNFGLSIALYQRLIQEFPDYRL 153
Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
+ A L DE+ + RYP+ +A
Sbjct: 154 NDGAWYLLGYCLEKQNQFDESHATYQQLIARYPKSRFAIEA 194
>gi|304382427|ref|ZP_07364926.1| conserved hypothetical protein [Prevotella marshii DSM 16973]
gi|304336435|gb|EFM02672.1| conserved hypothetical protein [Prevotella marshii DSM 16973]
Length = 274
Score = 46.3 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 48/264 (18%), Positives = 89/264 (33%), Gaps = 24/264 (9%)
Query: 28 FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87
F A+C L+ + + TD Y+ YE A + +A N+
Sbjct: 5 FLTAICGLLLLTSCAHEFNLVYRSTDYNYK---YEYAKECFARGKYQRAITLLNELIHIE 61
Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147
A++ L M +Y + Y+ A+ + ++Y T YP+ + + +G S + +
Sbjct: 62 KGTDNAQECLFMLGMAEYCSKDYEGASEVFKKYCTSYPKGFYAETAAFYIGESLYRSTPE 121
Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV-----------EI 196
DQ AT + ++ Y +S A+ + +++L KE
Sbjct: 122 PRLDQSATVSAIAAYQEYLDLYQDSKLKSAAQQRLFDLQDKLVRKEYLSAKLYYNLGSYF 181
Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE-AMARLVEAYV---------ALALMDEA 246
G Y A I Q L +Y + E+ A+ + + L +A
Sbjct: 182 GNCTSGGSNYEACIITAQNALKDYPYSNLREDFALLIMKSKFELAEQSVDSKRLERYQDA 241
Query: 247 REVVSLIQERYPQGYWARYVETLV 270
+ YP E +
Sbjct: 242 EDECYGFINEYPDSRERDTAEKYI 265
>gi|256845127|ref|ZP_05550585.1| conserved hypothetical protein [Fusobacterium sp. 3_1_36A2]
gi|256718686|gb|EEU32241.1| conserved hypothetical protein [Fusobacterium sp. 3_1_36A2]
Length = 524
Score = 46.3 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 23/263 (8%), Positives = 68/263 (25%), Gaps = 23/263 (8%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K L IF +++ L + ++ + + + + + F+ +
Sbjct: 1 MKKIGLIIFLALSFLLLTNCNKDKKKETVAVEYENKNPKIKFSDDTYKLFE--KFADNKK 58
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+ + + + K +A + I + +
Sbjct: 59 EIMEKLKTLNKDEANKLYEQYVEDNENILYKIGEATEKFLDSIYYGSAEEQFTEKDWNDT 118
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
++ + ++ + + + Y+ +
Sbjct: 119 NKILNKYDLELWNIGEGMVTIRELPHLYYDVFKDYVTDDYKEYLKIWAKDHEELYQADAG 178
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY---VALAL------------- 242
+ E I R++ L Y ++ + A L +Y L +
Sbjct: 179 LSISFEELGDRIARWENFLNKYPNSILKPKVTALL-NSYREDYILGMENTPTIDGGYDNV 237
Query: 243 ----MDEAREVVSLIQERYPQGY 261
+EA++ ++YP
Sbjct: 238 PITIYEEAKKEYDRFMKKYPNSP 260
>gi|53715697|ref|YP_101689.1| hypothetical protein BF4417 [Bacteroides fragilis YCH46]
gi|52218562|dbj|BAD51155.1| conserved hypothetical protein [Bacteroides fragilis YCH46]
Length = 1002
Score = 46.3 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 18/211 (8%), Positives = 46/211 (21%), Gaps = 22/211 (10%)
Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
+Y + + + +A F + +L + + +
Sbjct: 469 ADALYWRGEAYYRLNRMEEAKRNFTDYLQLTQQTHNEMYALAHYNLGYIAFHQKDYTQAQ 528
Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
+ + ++ A + N K
Sbjct: 529 ---------------------NWFRKYISLEKGENKTALADAYNRIGDCYLDVRNFDEAK 567
Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLK-RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
+ +Y I + Y + +A A+
Sbjct: 568 HYYSQAEAMNTPSGDYSFYQLALVSGLQKDYSGKITLLNRLAGKYPASPYAISALYEKGR 627
Query: 236 AYVALALMDEAREVVSLIQERYPQGYWARYV 266
+YV + +A + +YP+ +R
Sbjct: 628 SYVLMDNNQQAIASFKELLAKYPESPVSRKA 658
>gi|220935395|ref|YP_002514294.1| hypothetical protein Tgr7_2227 [Thioalkalivibrio sp. HL-EbGR7]
gi|219996705|gb|ACL73307.1| conserved hypothetical protein [Thioalkalivibrio sp. HL-EbGR7]
Length = 265
Score = 46.3 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 21/111 (18%), Positives = 40/111 (36%), Gaps = 1/111 (0%)
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY-LKRGEYVAAIPRFQLVLANY 220
+ E RF + LA+ ++ +A+ F+ VL Y
Sbjct: 148 FDLLREGRYEQSVSAFRRFLEAYPESGLASNAQYWLGEAKYVSRDFPSALTEFEKVLRQY 207
Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
D+ +A +L + L D+ARE + ++ + AR E ++
Sbjct: 208 PDSNKVADAQLKLGFTHYELGQWDKARETLEQVRRDHAGSAVARLAEQRLQ 258
>gi|160888159|ref|ZP_02069162.1| hypothetical protein BACUNI_00567 [Bacteroides uniformis ATCC 8492]
gi|317478939|ref|ZP_07938086.1| outer membrane assembly lipoprotein YfiO [Bacteroides sp. 4_1_36]
gi|156862294|gb|EDO55725.1| hypothetical protein BACUNI_00567 [Bacteroides uniformis ATCC 8492]
gi|316904916|gb|EFV26723.1| outer membrane assembly lipoprotein YfiO [Bacteroides sp. 4_1_36]
Length = 272
Score = 46.3 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 42/226 (18%), Positives = 78/226 (34%), Gaps = 15/226 (6%)
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
YE A + + +++A N+ A +SL M Y+ YQ AA +Y
Sbjct: 34 YEAAKNYFAKGQYNRAATLLNELIAILKGTDKAEESLYMLGMSYYNQKDYQTAAQTFIQY 93
Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
YP + + G + + DQ T +Q + +E + S + A+
Sbjct: 94 YNVYPRGTFTELARFHAGKALYLDTPEPRLDQSGTYSAIQQLQMFMEYFPQSSKKEEAQN 153
Query: 181 YVTVGRNQLAAKEV-----EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
+ +++L KE Y A + Q L +Y E+ ++
Sbjct: 154 MIFALQDKLVMKEYLSAKLYYNMGNYLGNNYQACVITAQNALKDYPYTNLREDLSILILR 213
Query: 236 AYVALA----------LMDEAREVVSLIQERYPQGYWARYVETLVK 271
A LA EA + + +P+ + + V+ + K
Sbjct: 214 AKYELAVYSVEDRRAERYREAVDECYAFKNEFPESKYMKEVDRIFK 259
>gi|329964267|ref|ZP_08301368.1| tetratricopeptide repeat protein [Bacteroides fluxus YIT 12057]
gi|328525572|gb|EGF52615.1| tetratricopeptide repeat protein [Bacteroides fluxus YIT 12057]
Length = 1010
Score = 46.3 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 29/232 (12%), Positives = 61/232 (26%), Gaps = 17/232 (7%)
Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA--FVQYSAGKYQQAA 114
+Y + + +A +FN +L ++ + Y A
Sbjct: 478 ADALYWLGEAYYRLGRMQEAARHFNDYLTLTRQRDTEMFALAYYNLAYIAFHQKDYATAE 537
Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR---------- 164
S ++ + + + + + +
Sbjct: 538 SRFRNFVQLEKGENPTALADAYNRIGDCNLHVRRFDEAKRYYTKAESLGTPAGDYSFYQL 597
Query: 165 -----IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219
+ + Y + E GR Y++ AI F+ +L
Sbjct: 598 ALVAGLQKDYNGKVSLLDRLASKYPHSPYAINALYEKGRSYVQSNNSRQAIAAFRELLNK 657
Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
Y ++ + +A A + Y D A E + +YP AR +K
Sbjct: 658 YPESPVSRKAAAEIGLLYYQNDDYDRAIEAYKHVVTQYPGSEEARLAMRDLK 709
Score = 38.6 bits (87), Expect = 0.94, Method: Composition-based stats.
Identities = 32/213 (15%), Positives = 65/213 (30%), Gaps = 15/213 (7%)
Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
+YEK +++ N +A F + +P + V+RK+ + Y Y +A +
Sbjct: 630 ALYEKGRSYVQSNNSRQAIAAFRELLNKYPESPVSRKAAAEIGLLYYQNDDYDRAIEAYK 689
Query: 119 EYITQYPESKNVDYVYYLVGMSY---------------AQMIRDVPYDQRATKLMLQYMS 163
+TQYP S+ + Y ++ + +
Sbjct: 690 HVVTQYPGSEEARLAMRDLKSIYVDANRVDEFATLAAQMPGEIRFEPSEQDSLTYIAAEK 749
Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
++ R+ + + K + A+ L Y D
Sbjct: 750 VYMKGEAMPAKDSFTRYLQSFPNGSFSLNAHYYLCVIGKEQKDDEAVLEHAGKLLEYPDN 809
Query: 224 EHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
++EEA+ E D+A +Q +
Sbjct: 810 PYSEEALLMHGEILFNRRQYDQAIADYKKLQAK 842
Score = 37.5 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 33/210 (15%), Positives = 72/210 (34%), Gaps = 15/210 (7%)
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
Y A ++L ++N+ KA +P + + +Y GKY +A E Y
Sbjct: 221 YYIAEIYLIKKNYDKAEIVAQNYLSAYPGQPHTGEMYRVLGTAEYHFGKYHEAMKSFERY 280
Query: 121 ITQYPESKNVDYVYYLVGMSYAQ-----MIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
+ + + Y++GMS Q + D+ + L + +
Sbjct: 281 LENNAGTTHRRDALYMLGMSCYQCGVYSQVPDILGEVTTGNDALSQNAYLHMGLAYLQLA 340
Query: 176 KGARFYV----------TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
+ + + + AA + + + ++ F+ L + ++ +
Sbjct: 341 DKTKARMAFEQAAASNADLKIKEQAAYNYALCIHETSYSAFGESVTVFEKFLNEFPNSPY 400
Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQE 255
A++ LVE Y+ D A + + I
Sbjct: 401 ADKVSNYLVEVYMNTRSYDAALKSIERITH 430
>gi|108762653|ref|YP_631287.1| social gliding motility protein Tgl [Myxococcus xanthus DK 1622]
gi|108466533|gb|ABF91718.1| social gliding motility protein Tgl [Myxococcus xanthus DK 1622]
Length = 253
Score = 46.3 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 20/240 (8%), Positives = 51/240 (21%), Gaps = 16/240 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+++ + + G + + R Y+ A+ + A
Sbjct: 1 MFRLSTASCSLALLLVSSGCSHTPTEK-------EKRSAEIHYDLALQAQQAGELQDALR 53
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
++ P A ++ + + + + + +
Sbjct: 54 ELQVSLKNDPDYPDANNAMGILLHLAFRRPDEAVKHYTKALEVRPDFSEARTNLANVHLD 113
Query: 139 MSYA------QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
+ + + + +
Sbjct: 114 QGRYDDAIKLYELVLNDMLYPTPFIAQGNLGWAYYKKGEPDRAVESIKAAVTTNPNFCLG 173
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+G Y + G A +F N D EA R L +D A+ +
Sbjct: 174 YKNLGLIYDETGRTSEACRQFTHYRENCPD---VAEAYMREGVCQAKLGQVDAAKAAFAT 230
>gi|257457860|ref|ZP_05623019.1| tetratricopeptide repeat domain protein [Treponema vincentii ATCC
35580]
gi|257444573|gb|EEV19657.1| tetratricopeptide repeat domain protein [Treponema vincentii ATCC
35580]
Length = 300
Score = 46.3 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 32/94 (34%)
Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
+ Y + Y A + A + GR G+Y + + +Y +
Sbjct: 70 QNYQRALYYADAFLENASEDERAAEVSYQKGRLLHLSGDYETSSKILYQFIEDYPEHPKV 129
Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
A + E A EAR+V S I YPQ
Sbjct: 130 PSAYYWIGENLYAAGNYTEARKVFSGIVADYPQS 163
>gi|237809440|ref|YP_002893880.1| tol-pal system protein YbgF [Tolumonas auensis DSM 9187]
gi|237501701|gb|ACQ94294.1| tol-pal system protein YbgF [Tolumonas auensis DSM 9187]
Length = 262
Score = 46.3 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 17/92 (18%), Positives = 32/92 (34%)
Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
+G+ L +G+ A F V Y D+ EA+ +L
Sbjct: 167 DTFIASYPNSALQPGAHYWLGQLQLNQGDREQAKAHFLTVAQKYKDSPKRPEAIYKLGVI 226
Query: 237 YVALALMDEAREVVSLIQERYPQGYWARYVET 268
A ++A + L+ ++YP A+ +
Sbjct: 227 AKADGDKEKANKFFQLVIKQYPNTSAAQLAQK 258
Score = 35.5 bits (79), Expect = 8.8, Method: Composition-based stats.
Identities = 12/69 (17%), Positives = 25/69 (36%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+K Y AIP F +A+Y ++ A L + + ++A+
Sbjct: 146 YESAVNLVIKEKNYAKAIPAFDTFIASYPNSALQPGAHYWLGQLQLNQGDREQAKAHFLT 205
Query: 253 IQERYPQGY 261
+ ++Y
Sbjct: 206 VAQKYKDSP 214
>gi|120554731|ref|YP_959082.1| TPR repeat-containing protein [Marinobacter aquaeolei VT8]
gi|120324580|gb|ABM18895.1| Tetratricopeptide TPR_2 repeat protein [Marinobacter aquaeolei VT8]
Length = 952
Score = 46.3 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 23/195 (11%), Positives = 42/195 (21%), Gaps = 11/195 (5%)
Query: 73 FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132
+ E R + + +Y A + E YI + +
Sbjct: 272 YLDGAETLQALFRQTGGRPYEILVYDRYSELLVEREQYGDAIDVFEAYI---EDHPASPW 328
Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG------- 185
+ + + A ++
Sbjct: 329 APRYHIRIIDTLELAGFTRTVPERKADFVSLYGIYSDYWQSAGPDAMGFIEQQLEQLLPE 388
Query: 186 -RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244
++ E Y A + A + D E + L E Y+ L
Sbjct: 389 LADRQYLLAGESSDQQQADDHYRKAASYYAEFAATFPDHPRTPERLFLLGETYLELEDWA 448
Query: 245 EAREVVSLIQERYPQ 259
EA + YPQ
Sbjct: 449 EAIAAFERVAYDYPQ 463
Score = 35.2 bits (78), Expect = 9.0, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 28/78 (35%)
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
+ E E AI +Q +L+ Y + E ++ +L A+ + +
Sbjct: 96 EFQRAERKMADTAVDELAGAIEAYQRLLSEYPEREGNDKIYYQLARAWELRGATPQQLDT 155
Query: 250 VSLIQERYPQGYWARYVE 267
+ + RYP + +
Sbjct: 156 LDTLVRRYPDSDYWIEAQ 173
>gi|189426318|ref|YP_001953495.1| tol-pal system protein YbgF [Geobacter lovleyi SZ]
gi|189422577|gb|ACD96975.1| tol-pal system protein YbgF [Geobacter lovleyi SZ]
Length = 248
Score = 46.3 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 22/121 (18%), Positives = 40/121 (33%), Gaps = 14/121 (11%)
Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
Y +Q ++ S YV A ++ IG Y + A
Sbjct: 131 YSTNNFATAIQAFELFIKELPASEYVPNAYYW--------------IGECYYSSSDLPNA 176
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
FQ V+ + A +A+ ++ +Y+A D+A+ + YP A
Sbjct: 177 HVAFQKVVDGWPRHSKAADALLKIGYSYLAQKQQDKAKSSFERLIRSYPGSPAAVKARER 236
Query: 270 V 270
+
Sbjct: 237 L 237
>gi|94264087|ref|ZP_01287886.1| Tetratricopeptide TPR_4 [delta proteobacterium MLMS-1]
gi|93455503|gb|EAT05693.1| Tetratricopeptide TPR_4 [delta proteobacterium MLMS-1]
Length = 703
Score = 46.3 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 22/109 (20%), Positives = 40/109 (36%), Gaps = 8/109 (7%)
Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
+ +I ++ S + A + R QLAAKE + ++ ++
Sbjct: 73 AARNYEQIHRQFGQSELAQEALWQAAELRRQLAAKEED--------PDWQRVRNLYRRYT 124
Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
Y D+ E+A L A+ + + EA L ++RYP
Sbjct: 125 VEYPDSHRREQAYLELGLAHFQMRFLREALTYFRLFEQRYPDSPLLPRA 173
Score = 35.2 bits (78), Expect = 9.8, Method: Composition-based stats.
Identities = 12/87 (13%), Positives = 29/87 (33%)
Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
+ + ++ +E+G + + A+ F+L Y D+
Sbjct: 111 PDWQRVRNLYRRYTVEYPDSHRREQAYLELGLAHFQMRFLREALTYFRLFEQRYPDSPLL 170
Query: 227 EEAMARLVEAYVALALMDEAREVVSLI 253
A + V + + EA E++ +
Sbjct: 171 PRARYWQARSMVEVGALAEALEILEQL 197
>gi|32477301|ref|NP_870295.1| hypothetical protein RB12056 [Rhodopirellula baltica SH 1]
gi|32447852|emb|CAD77370.1| conserved hypothetical protein containing TPR domain
[Rhodopirellula baltica SH 1]
Length = 1113
Score = 46.3 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 33/217 (15%), Positives = 70/217 (32%), Gaps = 13/217 (5%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
T + + + ++ + +KA + + FP + A + L SA Y AG
Sbjct: 276 DATAEDKAYSFFRQGYAYAQDGDPTKASASYEKLLTQFPQSPYAAAATLASAQTLYQAGD 335
Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
AAS + + + ++L + RD A K S ++ +
Sbjct: 336 LSGAASRFRDVLQGTDPVAATESAHWLARIDLGIANRDPSRTAEAAKSAYDVASELIAKG 395
Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
+ +A K L+ A ++Q + + +SD A A
Sbjct: 396 PQGSF-------------AVALKLDAAEALSLQPDRLNDAFEQYQSIASEHSDHPLAPRA 442
Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
+ + L ++A ++ + ++ A
Sbjct: 443 LYNAAFVALQLGNTEQAVKLADSFESKFSSDPLAPDA 479
Score = 44.8 bits (103), Expect = 0.013, Method: Composition-based stats.
Identities = 34/223 (15%), Positives = 64/223 (28%), Gaps = 22/223 (9%)
Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
+++ + + Y+ L EQ ++ A EYF AG+ +
Sbjct: 614 KELIRSNGESRMADQARYKLGQLANGEQQYAAAIEYFEPILASKRDAGLLPFARYAKGMA 673
Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
+ + ++++AA E I Q P+ D L
Sbjct: 674 ELQSQQHERAAESFSELIDQNPDHTLSDDA----------------------LLSRGIAY 711
Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
R + R +S A N L E+ + V A Q ++ D
Sbjct: 712 RHLNREADSRNDLNAYLDSKPTGNNLGHALYELALLDQNASQTVQAAESLQRIVDEVPDY 771
Query: 224 EHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
++ + L + D+A + +YP
Sbjct: 772 PDMDKVLYELGWSLRESGKDDQALTKFEQLIAKYPDNALVADA 814
Score = 39.8 bits (90), Expect = 0.46, Method: Composition-based stats.
Identities = 28/260 (10%), Positives = 74/260 (28%), Gaps = 29/260 (11%)
Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
+S + + + + +YE + +A F Q +P + +
Sbjct: 757 AAESLQRIVDEVPDYPDMDKVLYELGWSLRESGKDDQALTKFEQLIAKYPDNALVADAAY 816
Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
Y K+ AA+ + + + + Y +G + + + + +
Sbjct: 817 FVGQDHYRNSKWGDAAAAFQIAADKSNDLDLKEKSLYRLGWCFYKQQKYAEAEAAFKRQY 876
Query: 159 LQ----------YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE--------------- 193
++ M R+ Y R Y A +
Sbjct: 877 VEVQQGGLLLDSMMMIGESRFKQEQYETALRAYTKAREKIEADNDSAKTVRDKAERQVRE 936
Query: 194 ---VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
+ G+ + G+Y AI + + + + + + A ++A +
Sbjct: 937 LILLHGGQSAAQLGQYEDAIGWYDALRERFPATTYLPQVFYEIGFAAQNAGDDEKALKFY 996
Query: 251 SLIQERYPQGYWARYVETLV 270
S + + + + A ++
Sbjct: 997 SEVADNF-RSEIAARARFMM 1015
Score = 38.2 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 31/198 (15%), Positives = 66/198 (33%), Gaps = 10/198 (5%)
Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
S ++ +Y F K+Q +++A F + + G+ S++M ++
Sbjct: 841 KSNDLDLKEKSLYRLGWCFYKQQKYAEAEAAFKRQYVEVQQGGLLLDSMMMIGESRFKQE 900
Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
+Y+ A + + + + + + Q A + + +
Sbjct: 901 QYETALRAYTKAREKIEADNDSAKTVRDKAERQVRELILLHGGQSAAQ---------LGQ 951
Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
Y ++ A L EIG G+ A+ + V N+ +E A
Sbjct: 952 YEDAIGWYDALRERFPATTYLPQVFYEIGFAAQNAGDDEKALKFYSEVADNF-RSEIAAR 1010
Query: 229 AMARLVEAYVALALMDEA 246
A + E + A D+A
Sbjct: 1011 ARFMMGEIHFANKTFDKA 1028
>gi|121635128|ref|YP_975373.1| putative periplasmic protein [Neisseria meningitidis FAM18]
gi|120866834|emb|CAM10592.1| putative periplasmic protein [Neisseria meningitidis FAM18]
gi|325132380|gb|EGC55073.1| putative lipoprotein [Neisseria meningitidis M6190]
gi|325136517|gb|EGC59121.1| periplasmic protein [Neisseria meningitidis M0579]
gi|325138439|gb|EGC61005.1| putative lipoprotein [Neisseria meningitidis ES14902]
gi|325198573|gb|ADY94029.1| hypothetical protein NMBG2136_1330 [Neisseria meningitidis G2136]
Length = 238
Score = 46.3 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 14/72 (19%), Positives = 24/72 (33%)
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
+ + + G + I + D+ A EAM ++ E L D AR
Sbjct: 155 QRSMYLLLQSRARMGNCESVIEIGGRYANRFKDSPTAPEAMFKIGECQYRLQQKDIARAT 214
Query: 250 VSLIQERYPQGY 261
+ + YP
Sbjct: 215 WRSLIQAYPSSP 226
>gi|60683635|ref|YP_213779.1| TPR repeat-containing protein [Bacteroides fragilis NCTC 9343]
gi|253566489|ref|ZP_04843942.1| TPR repeat-containing protein [Bacteroides sp. 3_2_5]
gi|265767358|ref|ZP_06095024.1| TPR repeat-containing protein [Bacteroides sp. 2_1_16]
gi|60495069|emb|CAH09888.1| putative TPR-repeat protein [Bacteroides fragilis NCTC 9343]
gi|251944661|gb|EES85136.1| TPR repeat-containing protein [Bacteroides sp. 3_2_5]
gi|263252663|gb|EEZ24175.1| TPR repeat-containing protein [Bacteroides sp. 2_1_16]
gi|301165147|emb|CBW24717.1| putative TPR-repeat protein [Bacteroides fragilis 638R]
Length = 1002
Score = 46.3 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 18/211 (8%), Positives = 46/211 (21%), Gaps = 22/211 (10%)
Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
+Y + + + +A F + +L + + +
Sbjct: 469 ADALYWRGEAYYRLNRMEEAKRNFTDYLQLTQQTHNEMYALAHYNLGYIAFHQKDYTQAQ 528
Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
+ + ++ A + N K
Sbjct: 529 ---------------------NWFRKYISLEKGENKTALADAYNRIGDCYLDVRNFDEAK 567
Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLK-RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
+ +Y I + Y + +A A+
Sbjct: 568 HYYSQAEAMNTPSGDYSFYQLALVSGLQKDYSGKITLLNRLAGKYPASPYAISALYEKGR 627
Query: 236 AYVALALMDEAREVVSLIQERYPQGYWARYV 266
+YV + +A + +YP+ +R
Sbjct: 628 SYVLMDNNQQAIASFKELLAKYPESPVSRKA 658
>gi|332830423|gb|EGK03051.1| hypothetical protein HMPREF9455_01301 [Dysgonomonas gadei ATCC
BAA-286]
Length = 998
Score = 46.3 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 33/217 (15%), Positives = 61/217 (28%), Gaps = 22/217 (10%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
S Y +Y A +++N+SKA F + ++
Sbjct: 498 STKQQNYPLALYNLAYTDFQQKNYSKALTNFKKYISAETNRQSPNYPDALNRIGDCYLYN 557
Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
+ + N DY + ++ ++ +Y
Sbjct: 558 RNFSDAESYYSQAVNVNPANADYSEFQKAFVLGLQRNYNGKVSA--------LNNMMTKY 609
Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
NS Y A F E R + + AI + +L YS + A++A
Sbjct: 610 PNSQYYDNALF--------------EKSRALVMLNKEPEAISVLEKLLKEYSKSNLAQKA 655
Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
+L + Y ++ + YP AR
Sbjct: 656 GVQLGQLYFNTNNPQKSIAAYKEVVNNYPNSEEARTA 692
Score = 42.1 bits (96), Expect = 0.075, Method: Composition-based stats.
Identities = 19/202 (9%), Positives = 46/202 (22%), Gaps = 1/202 (0%)
Query: 66 LFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP 125
+ N++ R + Y A + +
Sbjct: 454 AAINMGNYNAEARNEAYFWRGDLAYRKGNYPAAARDYSSYIAQASTKQQNYPLALYNLAY 513
Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
+ + + L + N +
Sbjct: 514 TDFQQKNYSKALTNFKKYISAETNRQSPNYPDALNRIGDCYLYNRNFSDAESYYSQAVNV 573
Query: 186 RNQLAAKEVEIGRYYLK-RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244
A + L + Y + ++ Y ++++ + A+ A V L
Sbjct: 574 NPANADYSEFQKAFVLGLQRNYNGKVSALNNMMTKYPNSQYYDNALFEKSRALVMLNKEP 633
Query: 245 EAREVVSLIQERYPQGYWARYV 266
EA V+ + + Y + A+
Sbjct: 634 EAISVLEKLLKEYSKSNLAQKA 655
>gi|327312382|ref|YP_004327819.1| hypothetical protein HMPREF9137_0067 [Prevotella denticola F0289]
gi|326945155|gb|AEA21040.1| tetratricopeptide repeat protein [Prevotella denticola F0289]
Length = 1122
Score = 46.3 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 19/224 (8%), Positives = 50/224 (22%), Gaps = 2/224 (0%)
Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKE-QNFSKAYEYFNQCSRDFPFAGVARKSLLM 99
+ + R+ + N S+ Q S + ++ A + +
Sbjct: 445 KKKEKEERSQQQEQDNARQQGNGGYMGSNSLGNVSRQDNRRQQGSTWYFYSPTAVQQGKI 504
Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
+ + + + + + L
Sbjct: 505 TFQQLWGKRENIDNWQRINQGVVGRIGDTKTPVELTDQQRDSILQAEARQDSIDNARDSL 564
Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219
+ Y + + + + + + V +
Sbjct: 565 KN-DPHKREYYLAQIPFTPVQLEASNKILEDGLHHSGVIFKDRLDNLRLSEKALRRVSDD 623
Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
Y D E ++ L Y+ A V+ + +YP+ W
Sbjct: 624 YPDYEQMDDVYYHLYLLYMRKGDQQMADSYVTRLSRKYPKSKWT 667
Score = 41.3 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 31/235 (13%), Positives = 65/235 (27%), Gaps = 9/235 (3%)
Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
D+ T++ V K+ L + +F +A E + +
Sbjct: 56 GSLEKEKGNKDNFTELIPLYTVGNKSSRELGKGSFDRAIEKVEKAIARHSIKKRPEWTKN 115
Query: 99 MS-AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
++ + S+ + + ++A M R
Sbjct: 116 RRKTERDIEWLSRREYNPFLWKAWMLMGRSQFHEGAFEEAAATFAYMSRIYKGQPAIYGK 175
Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGR-NQLAAKEVEIGR--YYLKRGEYVAAIPRFQ 214
++++ + + + A KE + YYL GE A+P Q
Sbjct: 176 ARAWLAKCYIEQGWLYDAEDIIRNMQRDSLDWRAVKEWDYTYADYYLHSGELSKAVPYLQ 235
Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV-SLIQERYPQGYWARYVET 268
V+ + + + L + AL EA + +I+ P
Sbjct: 236 RVIKHEMRRKQKARELYLLGQVLAALGRNTEAYKAFQRVIRANPP----YELAFN 286
>gi|315606339|ref|ZP_07881355.1| conserved hypothetical protein [Prevotella buccae ATCC 33574]
gi|315252030|gb|EFU32003.1| conserved hypothetical protein [Prevotella buccae ATCC 33574]
Length = 1110
Score = 46.3 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 12/51 (23%), Positives = 24/51 (47%)
Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
+ ++ NY D EH ++A L Y + + A ++ ++ YP+ W
Sbjct: 612 LRRLVDNYPDFEHLDDAYYHLFLLYSRMGMPTVAESYINKLKRGYPKSRWT 662
Score = 37.5 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 25/217 (11%), Positives = 59/217 (27%), Gaps = 4/217 (1%)
Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
D+ T++ V K L NF +A E + +
Sbjct: 56 GSLEKEQGNKDNFTELIPLYTVGNKGSRELGLSNFQRAIEKSEKAIHQHSIKRRPEWTKS 115
Query: 99 MSAFVQYSAGKYQQAASLGEEYITQ-YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
+ ++ + ++ + ++A M R
Sbjct: 116 RRKTAKDIEWLNRREYNPFLWKAWLLMGRAQFHSGAFDEAASTFAYMSRLYATQPAIYGR 175
Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE---IGRYYLKRGEYVAAIPRFQ 214
++++ + + AA++ YY+ G++ AIP +
Sbjct: 176 ARAWLAKCYIEQGWMYDAEDVIRNMQRDSIHWAAQKEWDYTYVDYYIHSGDFRKAIPYLR 235
Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
V+ + + + + Y A+ EA +
Sbjct: 236 KVIRHEMRRKQRAREWYLMGQLYAAIGNRQEAYKSFR 272
>gi|160872344|ref|ZP_02062476.1| TPR repeat protein [Rickettsiella grylli]
gi|159121143|gb|EDP46481.1| TPR repeat protein [Rickettsiella grylli]
Length = 357
Score = 46.3 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 25/192 (13%), Positives = 56/192 (29%), Gaps = 1/192 (0%)
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
+ +L + + ++ ++ +
Sbjct: 149 HAVKLLEDQIRHQYSALDKRLNQRNTPIAIGKSNVSPTYSPLSARSVVDLSHEKKEGPND 208
Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN-QLAAKEVEIGRY 199
M + A + + + N F + A + +G+
Sbjct: 209 RKSMQPNAAPSAAAERAYQAAFQLLKTKQYNEAISAFEAFNKKFPNDLNGANADYFLGQL 268
Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
YL +G+ +AI F+ + YS +AM + AY A A + + ++YP
Sbjct: 269 YLLQGQADSAIRFFKQFITRYSQDARVPDAMLQCGLAYFAKGDKAAATGLFEKLIQQYPD 328
Query: 260 GYWARYVETLVK 271
A+ E ++
Sbjct: 329 SKAAQAAEARLQ 340
>gi|325142635|gb|EGC65026.1| putative lipoprotein [Neisseria meningitidis 961-5945]
Length = 238
Score = 46.3 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 14/72 (19%), Positives = 24/72 (33%)
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
+ + + G + I + D+ A EAM ++ E L D AR
Sbjct: 155 QRSMYLLLQSRARMGNCESVIEIGGRYANRFKDSPTAPEAMFKIGECQYRLQQKDIARAT 214
Query: 250 VSLIQERYPQGY 261
+ + YP
Sbjct: 215 WRSLIQAYPSSP 226
>gi|313668554|ref|YP_004048838.1| periplasmic protein [Neisseria lactamica ST-640]
gi|313006016|emb|CBN87475.1| putative periplasmic protein [Neisseria lactamica 020-06]
Length = 238
Score = 46.3 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 13/60 (21%), Positives = 22/60 (36%)
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
+ G + I + D+ A EA+ ++ E L D AR + + YP
Sbjct: 167 RMGNCESVIEIGGRYANRFKDSPTAPEAIFKIGECQYRLQQKDIARATWRSLIQAYPGSP 226
>gi|298529295|ref|ZP_07016698.1| tol-pal system protein YbgF [Desulfonatronospira thiodismutans
ASO3-1]
gi|298510731|gb|EFI34634.1| tol-pal system protein YbgF [Desulfonatronospira thiodismutans
ASO3-1]
Length = 292
Score = 46.3 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 31/243 (12%), Positives = 63/243 (25%), Gaps = 5/243 (2%)
Query: 20 YKFALTIFFSIAVCFLVGW--ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
T ++AV L + + + R Q E ++ L+ A
Sbjct: 1 MLIVKTFLLAVAVFVLSACVTGQSGVDRMQMQIRNLERQQHEDRQEMEQELERHQEELAA 60
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
AG ++ + + + + Q A G + + +
Sbjct: 61 AT-KALEEKVAEAGGPVQASQAHLWAELESLRVQVATMSGNLDALERKVFRMGEDQDIPE 119
Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
+ Q T + ++ + + VG Q A +
Sbjct: 120 EVKALQQRTQKLDRHLQTMASQLGVD--LQDEVETAAISDDPDLEPVGDPQTARALYQRA 177
Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
EY A ++ NY + + A E++ + EA + Y
Sbjct: 178 LDSFYDREYERAQSLWEEFAENYPEHDLISNAYFWQGESFYQMQEYAEAALAYQEVISNY 237
Query: 258 PQG 260
P
Sbjct: 238 PDS 240
Score = 42.9 bits (98), Expect = 0.056, Method: Composition-based stats.
Identities = 19/122 (15%), Positives = 45/122 (36%), Gaps = 5/122 (4%)
Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY-----LKRGEYVA 208
+ R ++ + + Y + + N + ++ + EY
Sbjct: 166 DPQTARALYQRALDSFYDREYERAQSLWEEFAENYPEHDLISNAYFWQGESFYQMQEYAE 225
Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
A +Q V++NY D+ +M + +++ L + + V++ + E YP AR
Sbjct: 226 AALAYQEVISNYPDSNKITASMLKQGMSFIELGREEAGQLVLNELLEEYPDSAEARRARA 285
Query: 269 LV 270
+
Sbjct: 286 FI 287
Score = 38.6 bits (87), Expect = 0.91, Method: Composition-based stats.
Identities = 22/102 (21%), Positives = 48/102 (47%)
Query: 43 SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102
S D L+ V D + R +Y++A+ ++ + +A + + + ++P + +
Sbjct: 156 SDDPDLEPVGDPQTARALYQRALDSFYDREYERAQSLWEEFAENYPEHDLISNAYFWQGE 215
Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
Y +Y +AA +E I+ YP+S + GMS+ ++
Sbjct: 216 SFYQMQEYAEAALAYQEVISNYPDSNKITASMLKQGMSFIEL 257
>gi|213026854|ref|ZP_03341301.1| outer membrane protein assembly complex subunit YfiO [Salmonella
enterica subsp. enterica serovar Typhi str. 404ty]
Length = 93
Score = 46.3 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 26/89 (29%), Positives = 43/89 (48%)
Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
Y NS Y A + +++LA E + YY RG +VA + R + +L NY D +
Sbjct: 1 SYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTARGAWVAVVNRVEGMLRNYPDTQATR 60
Query: 228 EAMARLVEAYVALALMDEAREVVSLIQER 256
+A+ + AY + L +A +V +I
Sbjct: 61 DALPLMENAYRQMQLNAQADKVAKIIAAN 89
>gi|212712431|ref|ZP_03320559.1| hypothetical protein PROVALCAL_03525 [Providencia alcalifaciens DSM
30120]
gi|212684888|gb|EEB44416.1| hypothetical protein PROVALCAL_03525 [Providencia alcalifaciens DSM
30120]
Length = 260
Score = 46.3 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 18/124 (14%), Positives = 42/124 (33%), Gaps = 14/124 (11%)
Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
+ + + ++ Y S Y A +++ +K+
Sbjct: 148 MESKSKAQIDEAIGALQGFIKTYPKSGYQSNANYWLGQLNYNKGSKD------------- 194
Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
A F V+ Y ++ + EA+ ++ D+A+ V + ++YP A+
Sbjct: 195 -DAAFYFATVVKQYPKSQKSSEALFKVGLIMQDKGQKDKAKAVYQQVLQQYPNSAGAKLA 253
Query: 267 ETLV 270
E +
Sbjct: 254 EKKL 257
>gi|322420010|ref|YP_004199233.1| lytic transglycosylase catalytic subunit [Geobacter sp. M18]
gi|320126397|gb|ADW13957.1| Lytic transglycosylase catalytic [Geobacter sp. M18]
Length = 706
Score = 45.9 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 33/212 (15%), Positives = 57/212 (26%), Gaps = 4/212 (1%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
T+ E++++A + K E F + RK Y A +Y
Sbjct: 219 KTEPYTGAELFKRAGTLYDLGRYLKGAEAFAEIPLTGESDDFVRKVKFKKGQALYKARRY 278
Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
QQA S V G + + Q + + + Y
Sbjct: 279 QQAQSTFTALSGNAEAELWVARTLDKAGRADEAFQLFLKLAQDPKGGNVSQEAMLEAAYL 338
Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE-- 228
K + R AA + G + +Q A + E+
Sbjct: 339 KRFQRKWSEAVPLFKRYLAAAPNQKNGNVLWETAWSSYQSRDYQEAAALFKKMAEREDTR 398
Query: 229 --AMARLVEAYVALALMDEAREVVSLIQERYP 258
A+ L + A+E + + YP
Sbjct: 399 EKALYWLGKTLTLTGDSKGAQEAFAALATEYP 430
Score = 38.6 bits (87), Expect = 0.85, Method: Composition-based stats.
Identities = 15/66 (22%), Positives = 27/66 (40%)
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
G K + A+P +L +Y + A +A+ ++ A EA++ +
Sbjct: 97 YYQGLSLSKLQRHDQALPPLYKLLKDYPGSRLARQALILYADSLAAAGYPKEAQQSYATF 156
Query: 254 QERYPQ 259
ERYP
Sbjct: 157 VERYPS 162
>gi|163782371|ref|ZP_02177369.1| hypothetical protein HG1285_06275 [Hydrogenivirga sp. 128-5-R1-1]
gi|159882404|gb|EDP75910.1| hypothetical protein HG1285_06275 [Hydrogenivirga sp. 128-5-R1-1]
Length = 307
Score = 45.9 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 41/194 (21%), Positives = 79/194 (40%), Gaps = 2/194 (1%)
Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF--AGVARKSLLMSAFVQ 104
+ + +E Y +A+ KE+++ A FN+ + + + + A
Sbjct: 22 KITEEERAKKAQEYYREALSAYKEKDYGDAAWNFNEALKYMDYLTPKQIENAKFLLAKSY 81
Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
Y G Y A E+YI YP+ + + +YL+ SY + D DQ T ++
Sbjct: 82 YYDGDYVNAVVALEDYIFYYPKLRRTEEAFYLLIDSYINVSPDPYRDQEYTWKAIEKAKE 141
Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
+ R+ NS + + + ++A E+ I ++Y G +A R++ VL N+
Sbjct: 142 FLSRFPNSTFAPKVQKLIDKAYRKIAQHELYIAKFYEDYGYTYSAALRYREVLINFPGHV 201
Query: 225 HAEEAMARLVEAYV 238
E R + +
Sbjct: 202 SESEVAYRYIRCLL 215
>gi|117923617|ref|YP_864234.1| hypothetical protein Mmc1_0301 [Magnetococcus sp. MC-1]
gi|117607373|gb|ABK42828.1| Tetratricopeptide TPR_2 repeat protein [Magnetococcus sp. MC-1]
Length = 911
Score = 45.9 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 29/86 (33%), Gaps = 1/86 (1%)
Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA-EEAMARLV 234
+ + +++ Y ++ A+ + +L Y D AM R
Sbjct: 481 EEIPDPEMTFLANDPDRYIQLATAYYNHNDFPKALDLYIRILDAYPDTPAVTPWAMLRAA 540
Query: 235 EAYVALALMDEAREVVSLIQERYPQG 260
Y + DEA+ ++ + YP
Sbjct: 541 MCYRFMNKEDEAKRLLDRLGLIYPNS 566
>gi|196231811|ref|ZP_03130667.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
Ellin428]
gi|196223933|gb|EDY18447.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
Ellin428]
Length = 419
Score = 45.9 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 37/221 (16%), Positives = 71/221 (32%), Gaps = 16/221 (7%)
Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
D E +KA N S AY+ + + F + +A K+ +
Sbjct: 39 DDTAVAGSAAEQMKKAEKLEASGNDSGAYKSYKALVKRFGQSFLAPKAQRKVGMLLEKHH 98
Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
Y +A Y+T+YP+ ++ D V + + + + +
Sbjct: 99 DYDKAFDAYNSYLTKYPQGEDFDAVVDSM--------FKIAKLFLEGQKRKVFGVPVGPS 150
Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
+ + + + +G+ K+ +Y AI +Q V Y + A +
Sbjct: 151 MQRAQAMFESIVKNAPFSKLAPLSQFNVGQALEKQNDYPKAIEAYQAVYTKYPNDPVAAD 210
Query: 229 AMARLV--------EAYVALALMDEAREVVSLIQERYPQGY 261
A+ ++ E A +ARE RYP
Sbjct: 211 ALYQVGYVRAKDAREGSYDPATNRKAREAFEDFTARYPNSE 251
Score = 37.9 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 28/228 (12%), Positives = 63/228 (27%), Gaps = 26/228 (11%)
Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL------G 117
+L K ++ KA++ +N +P + + + Q+
Sbjct: 91 GMLLEKHHDYDKAFDAYNSYLTKYPQGEDFDAVVDSMFKIAKLFLEGQKRKVFGVPVGPS 150
Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
+ ES + + + + Q ++ + +Y N P
Sbjct: 151 MQRAQAMFESIVKNAPFSKLAPLSQFNVGQALEKQNDYPKAIEAYQAVYTKYPNDPVAAD 210
Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA-------- 229
A + V R + A A F+ A Y ++E +A
Sbjct: 211 ALYQVGYVRAKDAR------EGSYDPATNRKAREAFEDFTARYPNSEKVAQANENIRNLE 264
Query: 230 ------MARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+ + + Y A + + + P A Y + ++
Sbjct: 265 GGTNKNILDIAKFYDKTRKFKSAVIYYNDVIKAQPGSPEAEYAKGRIE 312
>gi|301059208|ref|ZP_07200146.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2]
gi|300446698|gb|EFK10525.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2]
Length = 650
Score = 45.9 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 34/263 (12%), Positives = 84/263 (31%), Gaps = 15/263 (5%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
L K A+++ + FL + + + + A + ++ +++ +
Sbjct: 7 LLKRAISVLLAGMALFLFAC----QPRSTRSFTEATQTRSDAFSVAEKYRQKGELAQSLK 62
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
Y+ +L A ++ + A + EE +YP+ + V Y +
Sbjct: 63 YYRSFLTQAVEDDRIPLALQRVAEIELKLNNPENALASLEELSRRYPDYAWMPEVRYQIS 122
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR-----------FYVTVGRN 187
Q+ R +A + QY +++ +
Sbjct: 123 AILYQLGRYEASAHKAILWLDQYQRHFLKKDVLVLLGDDFCAMGKTESAFFYWIEAKDVG 182
Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
+ ++ LK ++ +L N + E ++ A ++ D+A
Sbjct: 183 KDGEEKETGLDEKLKALIDASSPLLLSRLLENERGTFYPPEIYYQISSALLSQQEPDKAE 242
Query: 248 EVVSLIQERYPQGYWARYVETLV 270
+ V ++ E +W + E L+
Sbjct: 243 KAVRILMESTRNLHWIKKGEDLL 265
>gi|157135487|ref|XP_001663464.1| smile protein [Aedes aegypti]
gi|108870211|gb|EAT34436.1| smile protein [Aedes aegypti]
Length = 683
Score = 45.9 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 23/231 (9%), Positives = 57/231 (24%), Gaps = 23/231 (9%)
Query: 53 DVRYQREVYEKAVLFL---------------KEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
D + Y++A+ +++ +A ++ + A +L
Sbjct: 442 DKATAFQFYQQALELYPEYEVAHMNLGNLYSDAKDYRRALKHLQKAIEYHEDFHTAWMNL 501
Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA---QMIRDVPYDQRA 154
+ + + + YP Y ++ +
Sbjct: 502 GIVHAALKNHKDALVSYQRAMKGKKHYPNCMFNLGNLYNDMGNHNLALATWNETVRQDPK 561
Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
M + + + V + K G Y A +
Sbjct: 562 HVKAWNNMINVYDNANMNEQVLEVTARGLIHLPNHPNLLAARAIALAKMGNYPEAEQIYS 621
Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEARE-VVSLIQERYPQGYWAR 264
++ + E+ + + Y +D+A ++ PQ AR
Sbjct: 622 ELIVRHPG---EEKYLQNMGVLYHRWRKLDQAERMYRKALKIN-PQSEMAR 668
>gi|270297061|ref|ZP_06203260.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|270273048|gb|EFA18911.1| conserved hypothetical protein [Bacteroides sp. D20]
Length = 272
Score = 45.9 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 42/226 (18%), Positives = 78/226 (34%), Gaps = 15/226 (6%)
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
YE A + + +++A N+ A +SL M Y+ YQ AA +Y
Sbjct: 34 YEAAKNYFAKGQYNRAATLLNELIAILKGTDKAEESLYMLGMSYYNQKDYQTAAQTFIQY 93
Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
YP + + G + + DQ T +Q + +E + S + A+
Sbjct: 94 YNVYPRGTFTELARFHAGKALYLDTPEPRLDQSGTYSAIQQLQMFMEYFPQSSKKEEAQN 153
Query: 181 YVTVGRNQLAAKEV-----EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
+ +++L KE Y A + Q L +Y E+ ++
Sbjct: 154 MIFALQDKLVMKEYLSAKLYYNMGNYLGNNYQACVITAQNALKDYPYTNLREDLSILILR 213
Query: 236 AYVALA----------LMDEAREVVSLIQERYPQGYWARYVETLVK 271
A LA EA + + +P+ + + V+ + K
Sbjct: 214 AKYELAVYSVEDKRAERYREAVDECYAFKNEFPESKYMKEVDRIFK 259
>gi|188996580|ref|YP_001930831.1| tol-pal system protein YbgF [Sulfurihydrogenibium sp. YO3AOP1]
gi|188931647|gb|ACD66277.1| tol-pal system protein YbgF [Sulfurihydrogenibium sp. YO3AOP1]
Length = 232
Score = 45.9 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 21/249 (8%), Positives = 68/249 (27%), Gaps = 21/249 (8%)
Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
+F + FL + + +R + + + + ++ + N
Sbjct: 2 KKILFLGFSSIFLFSCASEDKITTLQRELLSLRQEVNELKD-----RTNDNTENIKNINA 56
Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
+ + + Q + + + V
Sbjct: 57 RLDKLSQKVAENSADIEKLKMGRQTYASSPTPP-------QEVKKEGKEEVAVPQNDKQL 109
Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
Y + + + + +++Y +S A F+ + I + +
Sbjct: 110 YQYALDLYFKGNIEESRKAFTEFLKKYPDSDLYGNAIFWAGQTFYAEKKYKDAIDIWEIF 169
Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
+ + +AM +L +Y+ L ++ ++ + + ++YP
Sbjct: 170 LKKCDEGKIKKCN---------KYPDAMLKLGYSYIELGNEEKGKQYLQDLIKKYPDSEP 220
Query: 263 ARYVETLVK 271
A + ++
Sbjct: 221 ASLAKKKLE 229
>gi|167753467|ref|ZP_02425594.1| hypothetical protein ALIPUT_01741 [Alistipes putredinis DSM 17216]
gi|167658092|gb|EDS02222.1| hypothetical protein ALIPUT_01741 [Alistipes putredinis DSM 17216]
Length = 995
Score = 45.9 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 30/230 (13%), Positives = 64/230 (27%), Gaps = 9/230 (3%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
+ Y +Y K+ + + + A F + + + VA LL F Q +
Sbjct: 167 NPQSEFYDHALYYKSYIAYAREQYDWARSGFERLLKSEAYGEVAPYYLLQIEFKQGNYRY 226
Query: 110 YQQAASLG-------EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
+ + ++ + + Y
Sbjct: 227 VVENGEELIRRASPRQRAELSRVMAEAWFRLGEYSKPLDYLDAFVQAGGEMGRDENYLYG 286
Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
+ + R + YL+ G+ A+ F + D
Sbjct: 287 FSLYRTARYDDAAEYLRKACGADDALTQNASYHLADCYLRGGDKQQAMQSFAMASNAEFD 346
Query: 223 AEHAEEAMARLVEAYVALA--LMDEAREVVSLIQERYPQGYWARYVETLV 270
+ AE+A+ + L +EA +V++ +YP R + L+
Sbjct: 347 SAIAEDALFNYGKLQYELGGGRFNEAIQVLNRYVAQYPSSPRVRTAKELL 396
Score = 40.5 bits (92), Expect = 0.26, Method: Composition-based stats.
Identities = 29/217 (13%), Positives = 63/217 (29%), Gaps = 24/217 (11%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
T+ Y Y ++N +A E F + +P + G
Sbjct: 496 PKTEPEYAMAFYNTGYCHFSKENMPRARESFVRFIELYPTQD------GYRTDARNRLGD 549
Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
+ +E + Y ++ + + LQ + R
Sbjct: 550 TYYSDRQFDEALKYYGQAAAASDDGADYARYQRAVTLGILGRTSEKIKALQQ----IIRD 605
Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
Y+ A + E+GR ++ + Y + + Y + + A
Sbjct: 606 GRGDYLDDATY--------------ELGRTFVAQERYREGAAVLEPFVETYVYSPYRSAA 651
Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
++ L AY+ L ++ ++ + PQ A+
Sbjct: 652 LSELGLAYLNLGDKKKSLSYYDMVVKTAPQSSDAKDA 688
>gi|311234963|gb|ADP87817.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfovibrio
vulgaris RCH1]
Length = 1070
Score = 45.9 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 18/107 (16%), Positives = 36/107 (33%)
Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219
Q+ I+E Y + + ++ + +G L+ G A F L+
Sbjct: 468 QHKDTILEGYESIMDATSEAMNYNIRSPRVPLALLRLGLLNLRAGNTREAEAYFALMKRQ 527
Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
Y ++ A L E +A + I + +P+ + R
Sbjct: 528 YPHDDNIPLAYFYLGEDQFRKGQYQKAADQFQYILQNHPESRYVRES 574
Score = 43.6 bits (100), Expect = 0.026, Method: Composition-based stats.
Identities = 26/214 (12%), Positives = 68/214 (31%), Gaps = 15/214 (7%)
Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
D + V ++ +A + +++ A E + P + ++
Sbjct: 405 DEKGNPVPPPPDPPQLLAEAKSLISTKDWPGALERLG-LLKGLPDIPSDMREEVLYLISD 463
Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
+++ G E I + + + T+ Y +
Sbjct: 464 TLFAQHKDTILEGYESIMDATSEAMNYNIRSPRVPLALLRLGLLNLRAGNTREAEAYFAL 523
Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
+ Y + +G ++G+Y A +FQ +L N+ ++
Sbjct: 524 M-----KRQYPHDDNIPLAY---------FYLGEDQFRKGQYQKAADQFQYILQNHPESR 569
Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
+ E+ L + L +++A ++ + +R+P
Sbjct: 570 YVRESSVFLARSLHRLGYLEQASAIMDFVDKRWP 603
Score = 35.9 bits (80), Expect = 5.9, Method: Composition-based stats.
Identities = 23/224 (10%), Positives = 53/224 (23%), Gaps = 20/224 (8%)
Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
+ RE+YE+A+ +++ R + + V
Sbjct: 655 DIYAQQKQDKAAREIYEEALRRFPDKD-----GGLIALLRLTEQGIYDKPDVAAMFSVFD 709
Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
G A + + + M + +
Sbjct: 710 KPGASDPAEAYNRIIEGHPKSAL------VPMARIKLAMWHLWKQKYPEALEAMAEFAAQ 763
Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
++ + A KE + Y + + P + N+
Sbjct: 764 HGKHELLDKAREVAVRAFGLLAADAVKEGD----YDRVLRFWEDYPIVREQAKNFG---- 815
Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
E L ++ +A EV+ + ++ P + L
Sbjct: 816 -PELRLALGMSFWKKDRPGQALEVLEPLIKQPPDAKYGEAAMNL 858
>gi|226942083|ref|YP_002797157.1| YbgF [Laribacter hongkongensis HLHK9]
gi|226717010|gb|ACO76148.1| YbgF [Laribacter hongkongensis HLHK9]
Length = 253
Score = 45.9 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 21/194 (10%), Positives = 53/194 (27%), Gaps = 14/194 (7%)
Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
+ + R++ L + Q + A+ +
Sbjct: 70 LKGDVEVLTYNLQTTQTRQNDLYNDLDQRLMPLEGKTAAPAAAAGETAGNPAVAQTQPTV 129
Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196
+ QR K + + ++ + AR+++
Sbjct: 130 DPVQAGYDQALGLLRQRDFKKAIPALKSFIDANPQAAQAPDARYWL-------------- 175
Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
G Y ++ AI +Q + + +AM L L A+ + ++
Sbjct: 176 GVAYNAERQFQPAIDTYQRFIELSPNHPRVPDAMRNLGGCQRDLGDSARAKSTWQALIKK 235
Query: 257 YPQGYWARYVETLV 270
+P+ A+ + +
Sbjct: 236 FPKSEAAQKAKQQL 249
>gi|254412567|ref|ZP_05026341.1| Transglycosylase SLT domain protein [Microcoleus chthonoplastes PCC
7420]
gi|196180877|gb|EDX75867.1| Transglycosylase SLT domain protein [Microcoleus chthonoplastes PCC
7420]
Length = 730
Score = 45.9 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 28/234 (11%), Positives = 69/234 (29%), Gaps = 2/234 (0%)
Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
RD ++ ++ A + + + + KA + + + A +
Sbjct: 216 GSGGIRDRLVNEYASGLQPQDWQTIAFGYWETREYDKAAKAYTKAPPTPENAYRVGRGYH 275
Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY--VYYLVGMSYAQMIRDVPYDQRATK 156
+ Q + YQQ + + + Q++ P +
Sbjct: 276 LKGKRQEAKAGYQQLIRTFPDAKETGLGLRRLASLLPSQEAIPYLDQVVAKFPDEAPEAL 335
Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
L + + ++ + + + A ++ + G A Q +
Sbjct: 336 LTKANILEALGSSQSATQARQSVLTQYPNSDAAADYRWQVANQKAQAGNLAEAWQWAQPI 395
Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
+ D+ A EA + + L +EA + +YP+ Y+A +
Sbjct: 396 TTDSPDSAIAPEAAFWVGRWAMQLGRQEEATSAFEHVLAQYPESYYAWRSARFL 449
>gi|46581300|ref|YP_012108.1| TPR domain-containing protein [Desulfovibrio vulgaris str.
Hildenborough]
gi|46450721|gb|AAS97368.1| TPR domain protein [Desulfovibrio vulgaris str. Hildenborough]
Length = 1076
Score = 45.9 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 18/107 (16%), Positives = 36/107 (33%)
Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219
Q+ I+E Y + + ++ + +G L+ G A F L+
Sbjct: 474 QHKDTILEGYESIMDATSEAMNYNIRSPRVPLALLRLGLLNLRAGNTREAEAYFALMKRQ 533
Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
Y ++ A L E +A + I + +P+ + R
Sbjct: 534 YPHDDNIPLAYFYLGEDQFRKGQYQKAADQFQYILQNHPESRYVRES 580
Score = 43.6 bits (100), Expect = 0.026, Method: Composition-based stats.
Identities = 26/214 (12%), Positives = 68/214 (31%), Gaps = 15/214 (7%)
Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
D + V ++ +A + +++ A E + P + ++
Sbjct: 411 DEKGNPVPPPPDPPQLLAEAKSLISTKDWPGALERLG-LLKGLPDIPSDMREEVLYLISD 469
Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
+++ G E I + + + T+ Y +
Sbjct: 470 TLFAQHKDTILEGYESIMDATSEAMNYNIRSPRVPLALLRLGLLNLRAGNTREAEAYFAL 529
Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
+ Y + +G ++G+Y A +FQ +L N+ ++
Sbjct: 530 M-----KRQYPHDDNIPLAY---------FYLGEDQFRKGQYQKAADQFQYILQNHPESR 575
Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
+ E+ L + L +++A ++ + +R+P
Sbjct: 576 YVRESSVFLARSLHRLGYLEQASAIMDFVDKRWP 609
Score = 35.9 bits (80), Expect = 5.9, Method: Composition-based stats.
Identities = 23/224 (10%), Positives = 53/224 (23%), Gaps = 20/224 (8%)
Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
+ RE+YE+A+ +++ R + + V
Sbjct: 661 DIYAQQKQDKAAREIYEEALRRFPDKD-----GGLIALLRLTEQGIYDKPDVAAMFSVFD 715
Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
G A + + + M + +
Sbjct: 716 KPGASDPAEAYNRIIEGHPKSAL------VPMARIKLAMWHLWKQKYPEALEAMAEFAAQ 769
Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
++ + A KE + Y + + P + N+
Sbjct: 770 HGKHELLDKAREVAVRAFGLLAADAVKEGD----YDRVLRFWEDYPIVREQAKNFG---- 821
Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
E L ++ +A EV+ + ++ P + L
Sbjct: 822 -PELRLALGMSFWKKDRPGQALEVLEPLIKQPPDAKYGEAAMNL 864
>gi|108757885|ref|YP_630166.1| TPR repeat-containing protein [Myxococcus xanthus DK 1622]
gi|108461765|gb|ABF86950.1| tetratricopeptide repeat protein [Myxococcus xanthus DK 1622]
Length = 1111
Score = 45.9 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 23/214 (10%), Positives = 58/214 (27%), Gaps = 17/214 (7%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
+ Y+ A L +F +A F + +P VAR + ++ +
Sbjct: 594 PAGEKAPGIAYQAAELHYSHDDFPEARRRFETIIQAYPSHEVARYATNLTIETFLIDEDW 653
Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSY---AQMIRDVPYDQRATKLMLQYMSRIVE 167
+ S+ + ++ + + D + + +V+
Sbjct: 654 RSVESVSARLASNDKVIDPSSDLHKQLVKFKLAGRFKLADQLMAESKYEEAAAKYIELVD 713
Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
+ A + + +A+ ++ + Y + A
Sbjct: 714 ESPRHEFADKA--------------LNNAAVAHENTRRFDSALKLYERIYREYPSSPLAG 759
Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
A+ R+ D+A + + YP
Sbjct: 760 GALFRVAVNAENSYDFDKAVVSYQKLVKDYPDSK 793
Score = 36.3 bits (81), Expect = 4.7, Method: Composition-based stats.
Identities = 15/81 (18%), Positives = 28/81 (34%)
Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
R + K + R +Y +I ++ +LA + D + A L +
Sbjct: 149 RLEAHDKNPDAEFPTEPRVDYAPSIALYRKLLATFPDYRLNDGAWYLLAYCLEKQDQYGD 208
Query: 246 AREVVSLIQERYPQGYWARYV 266
+ + RYPQ +A
Sbjct: 209 SLHAYQQLIARYPQSRFATES 229
>gi|320539137|ref|ZP_08038808.1| tol-pal system protein [Serratia symbiotica str. Tucson]
gi|320030775|gb|EFW12783.1| tol-pal system protein [Serratia symbiotica str. Tucson]
Length = 258
Score = 45.9 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 21/120 (17%), Positives = 45/120 (37%), Gaps = 14/120 (11%)
Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
+++ + V++Y S Y A +++ K+ A
Sbjct: 151 EKKQYDPAISAFQSFVKQYPKSTYQPNANYWLGQLFYNKGKKD--------------DAA 196
Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
F +V+ NY+ + A +AM ++ D+A+ V + ++YP A ++ V
Sbjct: 197 YYFAVVVKNYAKSPKAPDAMYKVGIIMQEKGQADKAKAVFQQVIKQYPTSAAATLAKSRV 256
Score = 45.6 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 13/75 (17%), Positives = 27/75 (36%)
Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
L++ +Y AI FQ + Y + + A L + + D+A +
Sbjct: 141 NYNTAVSLALEKKQYDPAISAFQSFVKQYPKSTYQPNANYWLGQLFYNKGKKDDAAYYFA 200
Query: 252 LIQERYPQGYWARYV 266
++ + Y + A
Sbjct: 201 VVVKNYAKSPKAPDA 215
>gi|284007878|emb|CBA73799.1| conserved hypothetical protein [Arsenophonus nasoniae]
Length = 253
Score = 45.9 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 14/69 (20%), Positives = 25/69 (36%), Gaps = 2/69 (2%)
Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
+ + AI FQ + Y + A L + D+A + + + YP
Sbjct: 146 KQQIAQAISSFQHFIKTYPKSNLQPNANYWLGQLNYNQGNKDDAAFYFATVVKNYPNSP- 204
Query: 263 ARYVETLVK 271
+ E+L K
Sbjct: 205 -KGAESLYK 212
Score = 44.8 bits (103), Expect = 0.013, Method: Composition-based stats.
Identities = 18/114 (15%), Positives = 37/114 (32%), Gaps = 14/114 (12%)
Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
+ ++ Y S A +++ K+ A F V
Sbjct: 151 QAISSFQHFIKTYPKSNLQPNANYWLGQLNYNQGNKD--------------DAAFYFATV 196
Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
+ NY ++ E++ ++ D+AR V + + YP A+ E +
Sbjct: 197 VKNYPNSPKGAESLYKVGLLMQEKGQSDKARVVYQQVIKAYPGSPSAQLAEKKL 250
>gi|260173188|ref|ZP_05759600.1| TPR domain-containing protein [Bacteroides sp. D2]
gi|315921462|ref|ZP_07917702.1| TPR domain-containing protein [Bacteroides sp. D2]
gi|313695337|gb|EFS32172.1| TPR domain-containing protein [Bacteroides sp. D2]
Length = 1005
Score = 45.9 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 33/222 (14%), Positives = 71/222 (31%), Gaps = 22/222 (9%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
+ Y Y + +++++A YF + + + + + +
Sbjct: 502 QPNNEMYALANYNLGYIAFHRKDYTQASNYFQKYIQLEKG--------ENTTALADAYNR 553
Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
+ + + G + V Q+ + ++R+V +Y
Sbjct: 554 IGDCYLHVRSFEEAKHYYSQAEQMNTPSGDYSFYQLALVSGLQKDYSGKITLLNRLVGKY 613
Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
+SPY E GR Y+ AI F+ +L+ Y ++ + +A
Sbjct: 614 PSSPY--------------AVNAIYEKGRSYVLMDNNNQAITSFKELLSKYPESPVSRKA 659
Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
A + Y ++A + E+YP AR +K
Sbjct: 660 AAEIGLLYYQKGDYNQAIGAYKEVIEKYPGSEEARLAMRDLK 701
Score = 42.9 bits (98), Expect = 0.051, Method: Composition-based stats.
Identities = 33/262 (12%), Positives = 71/262 (27%), Gaps = 19/262 (7%)
Query: 19 LYK-FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
+ K I +I ++G+ + S + D+ +Y++ +E+N++ A
Sbjct: 1 MKKEITRLICAAICCTPMIGFAQTSDKFTSTDN---------LYKEGKELFQEKNYAAAL 51
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
+ P A + + + M A Y + L + L
Sbjct: 52 PALKAFVKQKPAASLLQDAEYMLASSAYELKDKNRIEILRKYLDRYPDTPYANRIYALLA 111
Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSR-----IVERYTNSPYVKGARFYVTVGRNQLAAK 192
+ + D + + + + T R A
Sbjct: 112 SCYFYEGKYDEALALFNSADLGLLGNEERDDCTYQLATCYLKTDNLREAAIWFETLRANS 171
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANY----SDAEHAEEAMARLVEAYVALALMDEARE 248
R+ L + D+++ + E Y L D+A+
Sbjct: 172 PKYAKDCDYYLSYIRYTQKRYNEALKGFLPLQDDSKYKALVPYYIAEIYAQLQNYDKAQI 231
Query: 249 VVSLIQERYPQGYWARYVETLV 270
V YP A + ++
Sbjct: 232 VAQNYLSAYPNNEHAAEMYRIL 253
>gi|329893687|ref|ZP_08269821.1| TPR repeat containing exported protein [gamma proteobacterium
IMCC3088]
gi|328923614|gb|EGG30926.1| TPR repeat containing exported protein [gamma proteobacterium
IMCC3088]
Length = 295
Score = 45.9 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 21/159 (13%), Positives = 51/159 (32%), Gaps = 12/159 (7%)
Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
Q+ ++ +E ++ + + A + R + + + Y +
Sbjct: 145 QSNAVMQEAVSAPVTASDSATPPADAKEEPAYLAARQLVYDRKFDDAVASFNEFLLDYPD 204
Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231
Y A +++ L++ + FQL+L Y +A
Sbjct: 205 GAYAPNAHYWLGELYL------------VLEQPNLELSRQAFQLLLDLYPQHNKVPDASF 252
Query: 232 RLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
+L Y A + A+ ++ + YP+ A + +
Sbjct: 253 KLATVYFAKGNAERAKTMLEAVIATYPKQPVAELAKKFL 291
>gi|325204426|gb|ADY99879.1| putative lipoprotein [Neisseria meningitidis M01-240355]
Length = 238
Score = 45.9 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 13/72 (18%), Positives = 24/72 (33%)
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
+ + + G + I + D+ A EA+ ++ E L D AR
Sbjct: 155 QRSMYLLLQSRARMGNCESVIEIGGRYANRFKDSPTAPEAIFKIGECQYRLQQKDIARAT 214
Query: 250 VSLIQERYPQGY 261
+ + YP
Sbjct: 215 WRSLIQAYPSSP 226
>gi|254670260|emb|CBA05515.1| conserved hypothetical protein [Neisseria meningitidis alpha153]
Length = 238
Score = 45.9 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 13/72 (18%), Positives = 24/72 (33%)
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
+ + + G + I + D+ A EA+ ++ E L D AR
Sbjct: 155 QRSMYLLLQSRARMGNCESVIEIGGRYANRFKDSPTAPEAIFKIGECQYRLQQKDIARAT 214
Query: 250 VSLIQERYPQGY 261
+ + YP
Sbjct: 215 WRSLIQAYPSSP 226
>gi|228474051|ref|ZP_04058792.1| TPR repeat protein [Capnocytophaga gingivalis ATCC 33624]
gi|228274565|gb|EEK13406.1| TPR repeat protein [Capnocytophaga gingivalis ATCC 33624]
Length = 996
Score = 45.9 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 29/221 (13%), Positives = 62/221 (28%), Gaps = 13/221 (5%)
Query: 48 LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107
L T Y +Y ++ + +A EYF++ + P A + L ++A
Sbjct: 489 LKETTLAEYPNALYGLGYALFNQKKYVEAAEYFSKYIQTQPEASRLADANLRLGDSYFAA 548
Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----------IRDVPYDQRATKL 157
GKY A ++ IT + + + +
Sbjct: 549 GKYWPAMEAYDKVITANVSNTDYAAFQKAISYGIVDRVPKKIEALNAFITHYPKSNLRED 608
Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRN---QLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
+ ++ + A + G + E A+ F+
Sbjct: 609 AIYELANTYVGQGKMEKASELYEMLQSQYQEGTYTARAMLREGLMLYNKNENQKALAIFK 668
Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
+ Y + A +A++ Y + M+E +
Sbjct: 669 KITQKYPSSPEAMQAVSSAKNIYAEMGKMEEYAAWAKALGY 709
Score = 44.0 bits (101), Expect = 0.022, Method: Composition-based stats.
Identities = 35/235 (14%), Positives = 69/235 (29%), Gaps = 14/235 (5%)
Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
S YQ+ + A+ + NF +A YF + + V ++ S Y
Sbjct: 412 EKSTSPDPKIYQQVAFLYALQLYGDGNFKEALPYFQKAKNSKAQSQVQARATYWSGETHY 471
Query: 106 SAGKYQQAASLGE-----------EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
+Y +A EY + + + + A
Sbjct: 472 QLHEYPEAQRDFSAFLALKETTLAEYPNALYGLGYALFNQKKYVEAAEYFSKYIQTQPEA 531
Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGR---NQLAAKEVEIGRYYLKRGEYVAAIP 211
++L + + Y Y V + + Y I
Sbjct: 532 SRLADANLRLGDSYFAAGKYWPAMEAYDKVITANVSNTDYAAFQKAISYGIVDRVPKKIE 591
Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
+ +Y + E+A+ L YV M++A E+ ++Q +Y +G +
Sbjct: 592 ALNAFITHYPKSNLREDAIYELANTYVGQGKMEKASELYEMLQSQYQEGTYTARA 646
>gi|298530866|ref|ZP_07018268.1| TPR repeat-containing protein [Desulfonatronospira thiodismutans
ASO3-1]
gi|298510240|gb|EFI34144.1| TPR repeat-containing protein [Desulfonatronospira thiodismutans
ASO3-1]
Length = 644
Score = 45.9 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 26/202 (12%), Positives = 49/202 (24%), Gaps = 6/202 (2%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK---SLLMSAFVQYSAGKYQQAASLGE 118
A +A + Q P + ++ A + A + + AS +
Sbjct: 78 NLAQNLEAMGRDEEAARRYLQMLDISPDSPSIHVRLAAIFGRAKNLHQARDHARRASELD 137
Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
+ + ++ + V + + N +
Sbjct: 138 PHNWDALMKLARAHHELEEPQKAKRLYQKVLTMNPEHPPAYSSLGSVCRELNNPEEAREH 197
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
A +G Y A + L H E A +RL AY
Sbjct: 198 LQRALELEPDSALHHTRMGSVCKDLKLYEEARDHYLRALEI---DPHFEHAHSRLGNAYK 254
Query: 239 ALALMDEAREVVSLIQERYPQG 260
L + +A + E P
Sbjct: 255 HLGQISDALKSYRRALELDPDS 276
>gi|161870308|ref|YP_001599478.1| periplasmic protein [Neisseria meningitidis 053442]
gi|161595861|gb|ABX73521.1| periplasmic protein [Neisseria meningitidis 053442]
gi|261392299|emb|CAX49825.1| conserved hypothetical TPR-containing periplasmic protein
[Neisseria meningitidis 8013]
Length = 238
Score = 45.9 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 13/72 (18%), Positives = 24/72 (33%)
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
+ + + G + I + D+ A EA+ ++ E L D AR
Sbjct: 155 QRSMYLLLQSRARMGNCESVIEIGGRYANRFKDSPTAPEAIFKIGECQYRLQQKDIARAT 214
Query: 250 VSLIQERYPQGY 261
+ + YP
Sbjct: 215 WRSLIQAYPSSP 226
>gi|78189867|ref|YP_380205.1| TPR repeat-containing protein [Chlorobium chlorochromatii CaD3]
gi|78172066|gb|ABB29162.1| TPR repeat [Chlorobium chlorochromatii CaD3]
Length = 287
Score = 45.9 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 27/78 (34%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ I + Y AI +Q V+A Y A+ R ++ + + A+
Sbjct: 210 QFYIADSFFSEKRYEQAIVEYQEVIAKYPKNSKRPAALYRQARSFELIGDVANAKTRYKD 269
Query: 253 IQERYPQGYWARYVETLV 270
+ YP A + +
Sbjct: 270 VVNVYPTSPEAALAKKKL 287
Score = 39.0 bits (88), Expect = 0.69, Method: Composition-based stats.
Identities = 26/243 (10%), Positives = 66/243 (27%), Gaps = 4/243 (1%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSS-RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
+ K L F ++ L + V D + +A + S A
Sbjct: 1 MKKHILP-FLALPFVLLNACASKQELNVVQYDVTRLKSEASNLKNEAQAIKSQTAVSYAD 59
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
+ + S ++ + +++ + + Q + V
Sbjct: 60 MQQVRNDIARLNGSLEEVSHRITEQTNKNNNVFKRLGTEDSLLVHQLSGLETKAAVLEKK 119
Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
+ + + L+ V + P V A + G
Sbjct: 120 LATLDSRLLALEGIVGTGTEALR--KDSVATTSIKPAVASTLAVEPTPATVNDASMFQEG 177
Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
+ Y AA F ++ + + +A + +++ + ++A + +Y
Sbjct: 178 VTLFGKKNYGAARQTFMALIKRFPTSLLVGDAQFYIADSFFSEKRYEQAIVEYQEVIAKY 237
Query: 258 PQG 260
P+
Sbjct: 238 PKN 240
>gi|119488444|ref|ZP_01621617.1| Lytic transglycosylase, catalytic [Lyngbya sp. PCC 8106]
gi|119455255|gb|EAW36395.1| Lytic transglycosylase, catalytic [Lyngbya sp. PCC 8106]
Length = 726
Score = 45.9 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 29/226 (12%), Positives = 73/226 (32%), Gaps = 7/226 (3%)
Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
+ + + A + ++Q++ K + + R + L + +
Sbjct: 215 EKLRLNYASQLTPEDWEAMAFGYWEKQDYGKGALAYAKAPRTPRNLYRHARGLWLEGKIP 274
Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVY----YLVGMSYAQMIRDVPYDQRATKLMLQ 160
S Y+Q + E + + + + + L
Sbjct: 275 ESRQAYEQLIQAFPDQTDPGGEDAGFGLIRLSRLSDRKDAVKYLDQAIAKFPFHRPEALY 334
Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQL---AAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
++++++ + AR + ++ A +I + + K G+ A + +
Sbjct: 335 DKAQLLDKLQSKQSASQARQMLLSQHSESEPAAQLRWKISQDFAKAGKIKEASKWAKELS 394
Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
D+E A EA + + + EA++ + RYP Y+A
Sbjct: 395 TQNPDSELAPEATFWIGKWAQQIGNSAEAKKAFEYLLARYPDSYYA 440
>gi|24213010|ref|NP_710491.1| regulatory-like cAMP-binding protein [Leptospira interrogans
serovar Lai str. 56601]
gi|45656173|ref|YP_000259.1| cyclic nucleotide binding protein [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|24193695|gb|AAN47509.1| regulatory-related cAMP-binding protein [Leptospira interrogans
serovar Lai str. 56601]
gi|45599407|gb|AAS68896.1| cyclic nucleotide binding protein [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
Length = 351
Score = 45.9 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 29/221 (13%), Positives = 58/221 (26%), Gaps = 3/221 (1%)
Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
L E+ A +F K NF A F + + + A ++ +
Sbjct: 114 KKLKEILGQSDTRNPAFELMNVAEVFYKNNNFPHAIYAFEKYLQHYSGTTYAGRATELLE 173
Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
+ ++ L E T + + + A
Sbjct: 174 LAKRNSPYPLNMPPLVFEGSTSRVTPETLQNIMKPAVEKSAITAGVDNSITSLYNRAHTL 233
Query: 162 MSRIVERYTNSPYVK---GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
++ Y F R + ++ LK+ + +A F +
Sbjct: 234 VNVGKHTDAMVIYKDLLNRTDFKFDSERKLVENSLFQLSVCLLKQNDLDSANSSFSTYIK 293
Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
Y E +E++ L E AR + + P+
Sbjct: 294 KYPSGESIKESLFHLAEISELQGDRQRARMLYGKVALLPPE 334
>gi|322421504|ref|YP_004200727.1| tetratricopeptide repeat-containing protein [Geobacter sp. M18]
gi|320127891|gb|ADW15451.1| Tetratricopeptide repeat [Geobacter sp. M18]
Length = 1097
Score = 45.9 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 20/99 (20%), Positives = 38/99 (38%)
Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
+ + Q A E G L+RG AI +Q +L Y E ++
Sbjct: 121 QQKPGESEADFEKRALKGPQTADGNRETGGEELERGGAREAIALYQKLLDKYPRYEGNDQ 180
Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
+ ++ AY L ++A V+ + + +P + V+
Sbjct: 181 VLYQMSRAYEELGQTEDAMAVMQRMVKDFPGSRYINEVQ 219
Score = 37.5 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 24/219 (10%), Positives = 62/219 (28%), Gaps = 17/219 (7%)
Query: 46 VYLDSVTDVRYQREVY-EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
Y + Y+ VY + +++ +S A +N PF V+ + + +
Sbjct: 324 EYFEKNGKRAYEDRVYSNLGEFYYEKRRYSDAAAAYNAFVSRNPFHRVSPQFHMRVIEIH 383
Query: 105 YSAGKYQQAASLGEEY---------ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
+ G +E+ ++ V + ++ + +
Sbjct: 384 IAGGFPTLVIEAKKEFAKNYGLKAEYWKHFAPGERPEVLGFLKTNFTDLAHHYHALYQNP 443
Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
+ + + + + A ++ ++ + A ++
Sbjct: 444 EHAKEKGESF----QEALHWYEEFLVSFPKEAESPAINYQMADLLMENRSFARAAQEYEK 499
Query: 216 VLANYSDAEHAEEAMARLVEAYVAL---ALMDEAREVVS 251
+Y E + A V AY A +E +V
Sbjct: 500 TAYDYPRYEKSSAAGYAAVFAYREQLKGAEKEEKDKVKR 538
>gi|149193984|ref|ZP_01871082.1| TPR repeat [Caminibacter mediatlanticus TB-2]
gi|149135937|gb|EDM24415.1| TPR repeat [Caminibacter mediatlanticus TB-2]
Length = 293
Score = 45.9 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 13/107 (12%), Positives = 35/107 (32%), Gaps = 1/107 (0%)
Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD-AE 224
+ K Y A +G K EY A+ ++ + Y
Sbjct: 184 LFNEGKLQKAKEYFLYTLSKNYFPATSAFYLGEIAFKNKEYNQALAYYKKSVEIYPKKTS 243
Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
++ + +++ L + A+ + + YP +++ + ++
Sbjct: 244 FTDKLLYHSGVSFLKLGNKEAAKLSFQKLIKDYPNSKYSKIAKKELE 290
>gi|87118950|ref|ZP_01074848.1| hypothetical protein MED121_11810 [Marinomonas sp. MED121]
gi|86165341|gb|EAQ66608.1| hypothetical protein MED121_11810 [Marinomonas sp. MED121]
Length = 262
Score = 45.9 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 39/78 (50%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+G L G+ V+AI +F+ V++ + + + + RL AY+ + + AR +
Sbjct: 181 YYWLGLLKLNSGDPVSAIEQFKSVISLFPSHDKETDTLYRLGFAYLKVDDKESARGYLVD 240
Query: 253 IQERYPQGYWARYVETLV 270
+ ER+P A+ + L+
Sbjct: 241 VIERFPNSKAAKLAKNLL 258
>gi|260841321|ref|XP_002613865.1| hypothetical protein BRAFLDRAFT_119888 [Branchiostoma floridae]
gi|229299255|gb|EEN69874.1| hypothetical protein BRAFLDRAFT_119888 [Branchiostoma floridae]
Length = 1638
Score = 45.9 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 30/223 (13%), Positives = 71/223 (31%), Gaps = 8/223 (3%)
Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR----KSLLMSAFVQYSAGKYQQ 112
+E+Y+ + L E ++ + F++ P + + L S + + ++
Sbjct: 1351 DKELYKAELALLDEDRPPQSADDFDRLVLSSPDSSILWLRYMAFHLHSTEIDKARTVAER 1410
Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
A + + V + + + V L ++V Y +
Sbjct: 1411 ALKTISFREEKEKLNVWVALMNLENMYGTEESLMTVFQRALQHNEALTIFKQLVNIYKRT 1470
Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE--EAM 230
+ A + + Y E A L+ ++ + + + +
Sbjct: 1471 GKTQEADQLYGTMVKRFRGNKDVWIDYGQFLMENKRAEAAHSLMQRSFKSLDKQDHVQVI 1530
Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQ--GYWARYVETLVK 271
+R L ++ R + I YP+ W+ Y+E L+K
Sbjct: 1531 SRFAVMEFKLGDVERGRTMFENILSNYPKQVSIWSVYLEMLIK 1573
>gi|193214646|ref|YP_001995845.1| hypothetical protein Ctha_0933 [Chloroherpeton thalassium ATCC
35110]
gi|193088123|gb|ACF13398.1| hypothetical protein Ctha_0933 [Chloroherpeton thalassium ATCC
35110]
Length = 628
Score = 45.9 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 22/212 (10%), Positives = 69/212 (32%), Gaps = 1/212 (0%)
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
Y+KA + + + + +A + S + + + + + +A+
Sbjct: 408 YDKASILVLQNDLPQAAQILTALSENPDADPELKSDAKLLLGEVFFYQQNYEASLQTLNE 467
Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
I+ ++ N L+ A + + I + + + +
Sbjct: 468 ISLGMKAGNNSLALKLLIFEGLADTLQHARALDALQAFSRVKKLIAQNKRTAAADSLSEW 527
Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA- 239
+ L+ + A+ F+ ++A++ ++ A+++M L + +
Sbjct: 528 SARYSYSSLSDHALFEKGTLEADIAPARAVQTFEKIIADFPESFFADKSMFELGQLFEHT 587
Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETLVK 271
L A + + YP+ + + ++
Sbjct: 588 LNDNARAMSYYEKLIQNYPKSLYVKDARARLR 619
>gi|120601520|ref|YP_965920.1| TPR repeat-containing protein [Desulfovibrio vulgaris DP4]
gi|120561749|gb|ABM27493.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio vulgaris DP4]
Length = 1070
Score = 45.9 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 18/107 (16%), Positives = 36/107 (33%)
Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219
Q+ I+E Y + + ++ + +G L+ G A F L+
Sbjct: 468 QHKDSILEGYESIMDATSEAMNYNIRSPRVPLALLRLGLLNLRAGNTREAEAYFALMKRQ 527
Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
Y ++ A L E +A + I + +P+ + R
Sbjct: 528 YPHDDNIPLAYFYLGEDQFRKGQYQKAADQFQYILQNHPESRYVRES 574
Score = 43.6 bits (100), Expect = 0.027, Method: Composition-based stats.
Identities = 26/214 (12%), Positives = 69/214 (32%), Gaps = 15/214 (7%)
Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
D + V ++ +A + +++ A E + P + ++
Sbjct: 405 DEKGNPVPPPPDPPQLLAEAKSLISTKDWPGALERLG-LLKGLPDIPSDMREEVLYLISD 463
Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
+++ + G E I + + + T+ Y +
Sbjct: 464 TLFAQHKDSILEGYESIMDATSEAMNYNIRSPRVPLALLRLGLLNLRAGNTREAEAYFAL 523
Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
+ Y + +G ++G+Y A +FQ +L N+ ++
Sbjct: 524 M-----KRQYPHDDNIPLAY---------FYLGEDQFRKGQYQKAADQFQYILQNHPESR 569
Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
+ E+ L + L +++A ++ + +R+P
Sbjct: 570 YVRESSVFLARSLHRLGYLEQASAIMDFVDKRWP 603
Score = 35.9 bits (80), Expect = 5.9, Method: Composition-based stats.
Identities = 23/224 (10%), Positives = 53/224 (23%), Gaps = 20/224 (8%)
Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
+ RE+YE+A+ +++ R + + V
Sbjct: 655 DIYAQQKQDKAAREIYEEALRRFPDKD-----GGLIALLRLTEQGIYDKPDVAAMFSVFD 709
Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
G A + + + M + +
Sbjct: 710 KPGASDPAEAYNRIIEGHPKSAL------VPMARIKLAMWHLWKQKYPEALEAMAEFAAQ 763
Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
++ + A KE + Y + + P + N+
Sbjct: 764 HGKHELLDKAREVAVRAFGLLAADAVKEGD----YDRVLRFWEDYPIVREQAKNFG---- 815
Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
E L ++ +A EV+ + ++ P + L
Sbjct: 816 -PELRLALGMSFWKKDRPGQALEVLEPLIKQPPDAKYGEAAMNL 858
>gi|154495172|ref|ZP_02034177.1| hypothetical protein PARMER_04221 [Parabacteroides merdae ATCC
43184]
gi|154085722|gb|EDN84767.1| hypothetical protein PARMER_04221 [Parabacteroides merdae ATCC
43184]
Length = 667
Score = 45.9 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 33/225 (14%), Positives = 62/225 (27%), Gaps = 7/225 (3%)
Query: 35 LVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR 94
+V + + + ++ +Y +A K N + E F
Sbjct: 433 IVQFSQMFNDRQLIEKSLRESEAELLYARAARCFKSGNVKEMVEAFAAAVSKRNELEKPE 492
Query: 95 KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
L+ +Q + Q L EE Q K + YYL+G D R+
Sbjct: 493 VQRLLRMKLQTMNTQRAQIKKLREEIHAQREIQKEYAHEYYLMGNECITKAHDPNAAIRS 552
Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
L+ V+ + L + + R + + +
Sbjct: 553 FDKALKLYPEFVDAWVRKGVTLLDMGDGFQAVTCLNEAVRLNPKSFKARYNRGKSYLQLK 612
Query: 215 LVLANYSDA-------EHAEEAMARLVEAYVALALMDEAREVVSL 252
SD A L EA++ + + AR+ +
Sbjct: 613 YYDEAVSDFMKAVDLKPKHAAAHEYLAEAFLHIGEEELARQHQDI 657
>gi|150007834|ref|YP_001302577.1| hypothetical protein BDI_1192 [Parabacteroides distasonis ATCC
8503]
gi|255013465|ref|ZP_05285591.1| hypothetical protein B2_06125 [Bacteroides sp. 2_1_7]
gi|256840092|ref|ZP_05545601.1| conserved hypothetical protein [Parabacteroides sp. D13]
gi|262381665|ref|ZP_06074803.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
gi|298376805|ref|ZP_06986760.1| lipoprotein [Bacteroides sp. 3_1_19]
gi|301310138|ref|ZP_07216077.1| putative lipoprotein [Bacteroides sp. 20_3]
gi|149936258|gb|ABR42955.1| conserved hypothetical protein [Parabacteroides distasonis ATCC
8503]
gi|256739022|gb|EEU52347.1| conserved hypothetical protein [Parabacteroides sp. D13]
gi|262296842|gb|EEY84772.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
gi|298266683|gb|EFI08341.1| lipoprotein [Bacteroides sp. 3_1_19]
gi|300831712|gb|EFK62343.1| putative lipoprotein [Bacteroides sp. 20_3]
Length = 269
Score = 45.9 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 46/227 (20%), Positives = 80/227 (35%), Gaps = 12/227 (5%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
+ + L + D Y A + + +SK+
Sbjct: 1 MKKVVFLLMMMTVLLSSCGEYNKILKSTDYELK-------YSYAKKYFNAKQYSKSATLL 53
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
++ F A +SL + A Y YQ A+ E Y T YP+ + + + G
Sbjct: 54 DELVTIFKGTAYAEESLYLLAQSYYGQKDYQTASQYFETYYTTYPKGEFTELSRFYSGYG 113
Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
D DQ T ++ + +E Y S + A+ + + +LA KE+ R Y
Sbjct: 114 LYLDSPDPRLDQSQTYKAIEQLQLYLEYYPQSERAEEAQNIMFELQEKLAYKELMATRLY 173
Query: 201 LK-----RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242
+ + + Q L NY +++ EE M ++ A LAL
Sbjct: 174 FNLGTYMGNNFQSCVITAQNALKNYPYSKYREEFMFLIIRAKYELAL 220
>gi|288926533|ref|ZP_06420451.1| lipoprotein [Prevotella buccae D17]
gi|315609033|ref|ZP_07884003.1| conserved hypothetical protein [Prevotella buccae ATCC 33574]
gi|288336675|gb|EFC75043.1| lipoprotein [Prevotella buccae D17]
gi|315249237|gb|EFU29256.1| conserved hypothetical protein [Prevotella buccae ATCC 33574]
Length = 282
Score = 45.9 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 44/271 (16%), Positives = 86/271 (31%), Gaps = 27/271 (9%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
+++ L G + ++ D+ YE A +++A
Sbjct: 1 MKKISLAALFVAILLSGCAHEFNQVYKSDNYPYK------YEYAKECFAAGKYTRAATLL 54
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
+ A++ L M A +Y YQ A+ ++Y + YP + + Y VG S
Sbjct: 55 GELVTVMKGTENAQECLYMYAMAEYCMRDYQTASEYFKKYYSSYPRGQYAEMAKYYVGES 114
Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
+ DQ T + ++ + + + A+ + +++L KE+ + Y
Sbjct: 115 LYMSTPEPRLDQSQTYSAISAYQEYLDLFPDGKLKQQAQQRLFALQDKLVQKELYNAQLY 174
Query: 201 LK-----------RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL------- 242
Y A I Q L Y + E L+++ LA
Sbjct: 175 YDLGTYFGNCTSGGNNYQACIVTSQNALKEYPYSSKRERFATLLMKSKYELAKMSVEAKQ 234
Query: 243 ---MDEAREVVSLIQERYPQGYWARYVETLV 270
+A++ YP E +
Sbjct: 235 MERYQDAQDECYGFLNEYPDSKERANCERYI 265
>gi|307195603|gb|EFN77453.1| Intraflagellar transport protein 88-like protein [Harpegnathos
saltator]
Length = 797
Score = 45.9 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 30/231 (12%), Positives = 59/231 (25%), Gaps = 15/231 (6%)
Query: 35 LVGWERQSSRDVYLDS------VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
L + TD + + +Y +++ K+ + +A E F +
Sbjct: 476 LSACAIKKDEFNIARELLLCALETDASHVQALYNLGLVYKKQNMYEEALECFWKVRNIVR 535
Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
L + + I M Q
Sbjct: 536 HDP-ETLYQLGHLYQLMNDADQASEWYNQLLGIISSDPGVLQKLGEMYDSMGDKQQAFQF 594
Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI----GRYYLKRG 204
D + + Y S V +LA E + G
Sbjct: 595 YSDSHRFFPANFEVIDWLGSYFISMQVAEKALTYFEKAVELAPDEPRWRLLVAACLRRIG 654
Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
++ A+ +Q + + D E + LV L L EA+ + +++
Sbjct: 655 QFHKALTEYQNIHNKFPDNI---ECLKFLVRLCSDLGLK-EAQIYAAELKK 701
>gi|294785570|ref|ZP_06750858.1| conserved hypothetical protein [Fusobacterium sp. 3_1_27]
gi|294487284|gb|EFG34646.1| conserved hypothetical protein [Fusobacterium sp. 3_1_27]
Length = 521
Score = 45.9 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 23/263 (8%), Positives = 68/263 (25%), Gaps = 23/263 (8%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K L IF +++ L + ++ + + + + + F+ +
Sbjct: 1 MKKIGLIIFLALSFLLLTNCNKDKKKETVAVEYENKNPKIKFSDDTYKLFE--KFADNKK 58
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+ + + + K +A + I + +
Sbjct: 59 EIMEKLKTLNKDEANKLYEQYVEDNENILYKIGEATEKFLDSIYYGSAEEQFTEKDWNDT 118
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
++ + ++ + + + Y+ +
Sbjct: 119 NMILNKYDLELWNIGEGMVTIRELPHLYYDVFKDYVTDDYKEYLKIWAKDHEELYQADAG 178
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY---VALAL------------- 242
+ E I R++ L Y ++ + A L +Y L +
Sbjct: 179 LSISFEELGDRIARWENFLNKYPNSILKPKVTALL-NSYREDYILGMENTPTIDGGYDNV 237
Query: 243 ----MDEAREVVSLIQERYPQGY 261
+EA++ ++YP
Sbjct: 238 PITIYEEAKKEYDRFMKKYPNSP 260
>gi|124266541|ref|YP_001020545.1| putative transmembrane protein [Methylibium petroleiphilum PM1]
gi|124259316|gb|ABM94310.1| putative transmembrane protein [Methylibium petroleiphilum PM1]
Length = 263
Score = 45.9 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 16/77 (20%), Positives = 31/77 (40%)
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+ + +Y AIP F+ ++A D A EA+ + + L AR + +
Sbjct: 183 YWLANAQYGKRDYKDAIPSFRALVAAAPDHPRAPEALLSIANCQLELKDTKSARRTLDEL 242
Query: 254 QERYPQGYWARYVETLV 270
+ YP+ A+ +
Sbjct: 243 LKNYPKSEAAQAGRERL 259
>gi|329955048|ref|ZP_08296029.1| outer membrane assembly lipoprotein YfiO [Bacteroides clarus YIT
12056]
gi|328526338|gb|EGF53353.1| outer membrane assembly lipoprotein YfiO [Bacteroides clarus YIT
12056]
Length = 267
Score = 45.9 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 39/226 (17%), Positives = 75/226 (33%), Gaps = 15/226 (6%)
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
YE A + + +++A N+ A +SL M Y+ YQ AA +Y
Sbjct: 34 YEAAKNYFAKGQYNRAATLLNELIAILKGTDKAEESLYMLGMSYYNQKDYQTAAQTFTQY 93
Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
YP + + G + + DQ T +Q + +E + NS A+
Sbjct: 94 YNVYPRGTFTELARFHAGKALYLDTPEPRLDQSGTYSAIQQLQMFLEYFPNSAKKDEAQS 153
Query: 181 YVTVGRNQLAAKEV-----EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
+ +++L KE Y + + Q L +Y E+ ++
Sbjct: 154 MIFTLQDKLVMKEYLSAKLYYNLGNYLGNNYESCVITAQNALKDYPYTNMREDLSILILR 213
Query: 236 AYVALA----LMDEAREVVSL------IQERYPQGYWARYVETLVK 271
A +A A + +P+ + + + + K
Sbjct: 214 AKYEMAVYSVEDKRAERYRETVDEYYAFKNEFPESKYMKDADRIFK 259
>gi|315644482|ref|ZP_07897614.1| Tetratricopeptide TPR_2 repeat protein [Paenibacillus vortex V453]
gi|315279989|gb|EFU43286.1| Tetratricopeptide TPR_2 repeat protein [Paenibacillus vortex V453]
Length = 578
Score = 45.9 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 28/199 (14%), Positives = 58/199 (29%), Gaps = 3/199 (1%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
++ +++AV L + KA +YF + P V ++
Sbjct: 15 ISIEMNANFFFDRAVRSLDRYQYDKALKYFRKAVEYEPDNPVNHCNMAGILSETGDYKAS 74
Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
+ E + M + + Q++ E
Sbjct: 75 NDVLAHILEQVDPLMTECYFYMANNYANMEQFEKAEEALVTYLEEDPNGQFLDEAEEMME 134
Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
Y + +++ E E R L+ G++ A+ + ++ +Y D A
Sbjct: 135 LLHYELNRPAKLNRIKSREGVVEHEHARALLEEGKFAQAVKLLEEIVKDYPDFLA---AR 191
Query: 231 ARLVEAYVALALMDEAREV 249
L AY + D A+
Sbjct: 192 NNLALAYYYMGRFDTAKRT 210
>gi|303248254|ref|ZP_07334517.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio
fructosovorans JJ]
gi|302490392|gb|EFL50303.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio
fructosovorans JJ]
Length = 1000
Score = 45.9 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 23/250 (9%), Positives = 63/250 (25%), Gaps = 29/250 (11%)
Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK-------SLLMSA 101
TD + + + KA + + FP + R+ +L+
Sbjct: 462 KYPTDANVPLINFYWGEYYFDRGEYKKAAKEYKDLIEKFPESKYVREGAMGLSKTLVRLG 521
Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
+ ++ Y ++P +D + + D T
Sbjct: 522 QYKEASQIADYINKRWPRYYVEFPTILRIDGDIAYKNGDFKKARDDYLTFYNMTPKAKDT 581
Query: 162 -------------------MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL- 201
+ + + +
Sbjct: 582 DLVLARLGDIYAKLGKRPAAVDFYNMAVKDYPNQEGGLIAKMRLAEQGVHDQPTVSEMFS 641
Query: 202 --KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
+ + + ++ ++ ++ ++ A A +L ++ E+ + + ERYP+
Sbjct: 642 LFDKPQQESPETIYEGIIRDHPNSPLAPLAQIKLAMWHLYRQNYPESLKAAARFLERYPK 701
Query: 260 GYWARYVETL 269
A E +
Sbjct: 702 NELAPKAEEV 711
Score = 45.2 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 36/212 (16%), Positives = 70/212 (33%), Gaps = 21/212 (9%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
+ R + + +L L+ N +A YFN +R +P + G+
Sbjct: 426 NTNSYRVPEALLQLGMLNLRAGNLPEAKGYFNVLTRKYPTDANVPLINFYWGEYYFDRGE 485
Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
Y++AA ++ I ++PESK V + + ++ + Q A
Sbjct: 486 YKKAAKEYKDLIEKFPESKYVREGAMGLSKTLVRLGQYKEASQIAD----------YINK 535
Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
Y + + G K G++ A + A+ +
Sbjct: 536 RWPRYYVEFPTILRID-----------GDIAYKNGDFKKARDDYLTFYNMTPKAKDTDLV 584
Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGY 261
+ARL + Y L A + ++ + YP
Sbjct: 585 LARLGDIYAKLGKRPAAVDFYNMAVKDYPNQE 616
Score = 44.4 bits (102), Expect = 0.015, Method: Composition-based stats.
Identities = 32/227 (14%), Positives = 64/227 (28%), Gaps = 17/227 (7%)
Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
+ + + V A N+ A R+ L +
Sbjct: 340 EGETPPPVEEDHDANVLIAAQAEKLAGNYETAKNMLINLKNAPGLKPELREETLHTLAGL 399
Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
Y + +E E+ N + + Y +
Sbjct: 400 YIDMYKDDPVAHYDEIQGALLEAMN-ANTNSYRVPEALLQLGMLNLRAGNLPEAKGYFNV 458
Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
+ +Y V F G YY RGEY A ++ ++ + +++
Sbjct: 459 LTRKYPTDANVPLINF--------------YWGEYYFDRGEYKKAAKEYKDLIEKFPESK 504
Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+ E L + V L EA ++ I +R+P + T+++
Sbjct: 505 YVREGAMGLSKTLVRLGQYKEASQIADYINKRWP--RYYVEFPTILR 549
>gi|305665470|ref|YP_003861757.1| tetratricopeptide repeat domain-containing protein [Maribacter sp.
HTCC2170]
gi|88710226|gb|EAR02458.1| tetratricopeptide repeat domain protein [Maribacter sp. HTCC2170]
Length = 592
Score = 45.9 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 27/206 (13%), Positives = 66/206 (32%), Gaps = 3/206 (1%)
Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
+ + ++ F++A YF+Q + + + + A + G + + + +
Sbjct: 378 GDILVYDKKFNQALIYFSQIQKKLKNDVLGQNARFKVAQTSFYKGDFDWSLTQLKVLRGS 437
Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
+ D + + +S + + + + +
Sbjct: 438 TSQLIANDAMQLSLLISDNSLEDSTQTALKKY--ARADLLAYQNKTKEAITALDDILQNH 495
Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA-LAL 242
G ++ G + +Y AA +Q ++ Y+ A++A L E Y L
Sbjct: 496 KGEKIEDEALLKQGELLVSIKDYDAAKFNYQKIIEFYTSDILADDAYFALGELYRNVLNE 555
Query: 243 MDEAREVVSLIQERYPQGYWARYVET 268
++A+E I Y Y+
Sbjct: 556 PEKAKEHYEKIIYNYQDSYYFPQARK 581
>gi|330721822|gb|EGG99796.1| Glutathione peroxidase [gamma proteobacterium IMCC2047]
Length = 282
Score = 45.9 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 16/124 (12%), Positives = 44/124 (35%), Gaps = 14/124 (11%)
Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
+ + ++++ Y +S Y + +++ G L
Sbjct: 164 YQVAFSLVRNKQYAEASAAFEQLIKDYPDSHYTGNSYYWL--------------GEVLLV 209
Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
+ A+ F+ +L Y + A +A + + Y+ + + + ++ + E+YP
Sbjct: 210 ESKQKQALDAFESLLEKYPNHRKAPDAKFKQGKIYLQMGDKAQGKVILQDVLEQYPDSSA 269
Query: 263 ARYV 266
A+
Sbjct: 270 AKLA 273
Score = 39.0 bits (88), Expect = 0.75, Method: Composition-based stats.
Identities = 30/251 (11%), Positives = 71/251 (28%), Gaps = 15/251 (5%)
Query: 18 QLYK-FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76
+ + AL F A + V + + L+
Sbjct: 1 MMTRPIALIAFVLAASTASISCANDPIPVVEASPGVAGKAVEQ-----QRQLQGG----- 50
Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
+ + ++ L Q +QA + Q ++D L
Sbjct: 51 --LPTKQQGSQLADMLYQQQQLQQEVQQLRGIVEEQAHEIKRMREEQRDRYLDLDRRITL 108
Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196
+ S + K + + + + P + V + A ++
Sbjct: 109 LNQSSSNQSAVTAKPVAVKKEAPKAQTSVAIKPK--PEPAVTKKPVQADASADAKDAYQV 166
Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
++ +Y A F+ ++ +Y D+ + + L E + + +A + + E+
Sbjct: 167 AFSLVRNKQYAEASAAFEQLIKDYPDSHYTGNSYYWLGEVLLVESKQKQALDAFESLLEK 226
Query: 257 YPQGYWARYVE 267
YP A +
Sbjct: 227 YPNHRKAPDAK 237
>gi|310821065|ref|YP_003953423.1| transglycosylase slt domain-containing protein [Stigmatella
aurantiaca DW4/3-1]
gi|309394137|gb|ADO71596.1| Transglycosylase SLT domain protein [Stigmatella aurantiaca
DW4/3-1]
Length = 806
Score = 45.9 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 8/76 (10%), Positives = 27/76 (35%)
Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
+ + + + ++ + + A++A+ + YV +D+A +
Sbjct: 371 PRAMYVLGSSRSIVDPRRGTETYERLAREFPGHSFADDALFYAADLYVKTNQLDQALARL 430
Query: 251 SLIQERYPQGYWARYV 266
++ YP+ +
Sbjct: 431 EELERNYPKADFLGEA 446
>gi|261855155|ref|YP_003262438.1| tol-pal system protein YbgF [Halothiobacillus neapolitanus c2]
gi|261835624|gb|ACX95391.1| tol-pal system protein YbgF [Halothiobacillus neapolitanus c2]
Length = 321
Score = 45.9 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 11/88 (12%), Positives = 30/88 (34%)
Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242
+ G Y + + +Q +L + +++ +A+ +
Sbjct: 226 DPQGQWTPSALFWQGETYYVEQKRDKSEAAYQKILTQFPNSDRVPDALLKTGYIAYDANK 285
Query: 243 MDEAREVVSLIQERYPQGYWARYVETLV 270
+AR++ + +YPQ A + +
Sbjct: 286 NKQARDIFQQVISKYPQSQAANLAKQRL 313
Score = 43.2 bits (99), Expect = 0.042, Method: Composition-based stats.
Identities = 21/117 (17%), Positives = 39/117 (33%), Gaps = 8/117 (6%)
Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
Q+ +Y A LK+ + +A F P +L Y K ++ +
Sbjct: 196 QQALYNAAFAQLKDGQYDQAITGFQAAIDADPQGQWTPSALFWQGETYYVEQKRDKSEAA 255
Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
++ +TQ+P S V + YD K +++ +Y S
Sbjct: 256 YQKILTQFPNSDRVPDA--------LLKTGYIAYDANKNKQARDIFQQVISKYPQSQ 304
Score = 38.6 bits (87), Expect = 0.85, Method: Composition-based stats.
Identities = 16/90 (17%), Positives = 25/90 (27%), Gaps = 2/90 (2%)
Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
LK G+Y AI FQ + + A+ E Y
Sbjct: 188 QDAAATAKQQALYNAAFAQLKDGQYDQAITGFQAAIDADPQGQWTPSALFWQGETYYVEQ 247
Query: 242 LMDEAREVVSLIQERYPQGYWARYVETLVK 271
D++ I ++P L+K
Sbjct: 248 KRDKSEAAYQKILTQFPNSDRVPDA--LLK 275
>gi|325128502|gb|EGC51380.1| putative lipoprotein [Neisseria meningitidis N1568]
Length = 238
Score = 45.9 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 13/72 (18%), Positives = 24/72 (33%)
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
+ + + G + I + D+ A EA+ ++ E L D AR
Sbjct: 155 QRSMYLLLQSRARMGNCESVIEIGGRYANRFKDSPTAPEAIFKIGECQYRLQQKDIARAT 214
Query: 250 VSLIQERYPQGY 261
+ + YP
Sbjct: 215 WRSLIQAYPSSP 226
>gi|124514219|gb|EAY55734.1| putative TPR-domain containing protein [Leptospirillum rubarum]
Length = 274
Score = 45.9 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 18/104 (17%), Positives = 35/104 (33%), Gaps = 2/104 (1%)
Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
+ + + + + + Y A E +G+ Y A+ F
Sbjct: 156 YRQAMNDYQTGHYQLSKKEFGQVVSLYPQSHLASSA--EFWVGQSEFNMKHYDKAVSSFL 213
Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
V+ NY D+ A +L +Y +L +A + E +P
Sbjct: 214 QVIKNYPDSPKRAVAYFKLGRSYESLGKKKDAIHSYRRVLELFP 257
Score = 35.2 bits (78), Expect = 9.1, Method: Composition-based stats.
Identities = 17/101 (16%), Positives = 40/101 (39%)
Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
+Y +A+ + ++ + + F Q +P + +A + +++ Y +A S
Sbjct: 151 SADILYRQAMNDYQTGHYQLSKKEFGQVVSLYPQSHLASSAEFWVGQSEFNMKHYDKAVS 210
Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
+ I YP+S Y+ +G SY + + +
Sbjct: 211 SFLQVIKNYPDSPKRAVAYFKLGRSYESLGKKKDAIHSYRR 251
>gi|254428223|ref|ZP_05041930.1| tetratricopeptide repeat domain protein [Alcanivorax sp. DG881]
gi|196194392|gb|EDX89351.1| tetratricopeptide repeat domain protein [Alcanivorax sp. DG881]
Length = 970
Score = 45.9 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 32/63 (50%)
Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
+Y AI +Q +L + +DA EA L +AY +D+AR + + E+YP WA
Sbjct: 142 DYSTAIQLYQELLNSTNDANERAEAYYLLSKAYAMDGDLDKARSSLDSLVEQYPNSEWAL 201
Query: 265 YVE 267
+
Sbjct: 202 ESQ 204
Score = 42.9 bits (98), Expect = 0.051, Method: Composition-based stats.
Identities = 30/227 (13%), Positives = 70/227 (30%), Gaps = 17/227 (7%)
Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
+++ + Y + + + + KA + +P + A +S +
Sbjct: 151 QELLNSTNDANERAEAYYLLSKAYAMDGDLDKARSSLDSLVEQYPNSEWALESQFRRGEM 210
Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
+S G Y+ A + I + ++ + Y G SY ++ +
Sbjct: 211 LFSEGDYEYAEKAYADVIERGERNEFYNQALYKHGWSYYKL--------GEYERAQDSFF 262
Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
+++ + + + + + V + G + +Y
Sbjct: 263 TLLDNLNGQAVLADNTSMES--KLFVDTQRVVSLSFSNLNGAKSVKAWFARNGNRDY--- 317
Query: 224 EHAEEAMAR-LVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
E A+ R L + Y+ +A E + + YP A TL
Sbjct: 318 ---EPAIYRTLGDVYLNQERFRDAAETYDMFVQVYPDSRLAPEFSTL 361
Score = 41.7 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 23/216 (10%), Positives = 51/216 (23%), Gaps = 16/216 (7%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
+ + + E ++ A + + ++L + Y G+Y
Sbjct: 195 PNSEWALESQFRRGEMLFSEGDYEYAEKAYADVIERGERNEFYNQALYKHGWSYYKLGEY 254
Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
++A + + + + R V R
Sbjct: 255 ERAQDSFFTLLDNLNGQAVLADNTSMESKLFVDTQRVVSLSFSNLNGAKSV-KAWFARNG 313
Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
N Y +G YL + + A + + + Y D+ A E
Sbjct: 314 NRDYEPAI--------------YRTLGDVYLNQERFRDAAETYDMFVQVYPDSRLAPEFS 359
Query: 231 ARLVEAYVALALMDEAREVVSLIQERYP-QGYWARY 265
+E+Y + Y +
Sbjct: 360 TLQIESYQKGGFPTLVLPAKEKFIDHYGVNSEYWNR 395
>gi|149376327|ref|ZP_01894090.1| hypothetical protein MDG893_05329 [Marinobacter algicola DG893]
gi|149359341|gb|EDM47802.1| hypothetical protein MDG893_05329 [Marinobacter algicola DG893]
Length = 955
Score = 45.9 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 31/242 (12%), Positives = 60/242 (24%), Gaps = 35/242 (14%)
Query: 17 YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76
Y+ L F +++ +L G + + + Y L L+ + ++ A
Sbjct: 258 YRTMMEDLFRVFGLSLSYLDGADTLQAIFRETGEKPYEILVYDRYSD--LLLEREQYTDA 315
Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
+ F + P + A + + AG ++ Y
Sbjct: 316 IDVFERYIDARPLSPWAPRYHMRIIDTLAQAGFTADIPDRKAAFVRDYGIHGAYLQQADD 375
Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196
Y + ++ N YV
Sbjct: 376 ETAQYIGQQ----------------LEELIPELANRHYV-----------------LAGE 402
Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
Y A ++ + E + L E +V LA EA E +
Sbjct: 403 TEGVESDDHYRQAAVYYEAFADTFPAHPRTPEMLFLLGETHVELAQWPEAIEAFERVAYD 462
Query: 257 YP 258
+P
Sbjct: 463 FP 464
Score = 45.6 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 29/78 (37%)
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
+ E E AI ++ +LA Y + ++ + +L AY + DE
Sbjct: 99 EFQRAENTMVETAMDEMAGAIEAYEQLLAEYPERPGNDQVLYQLARAYDLRGMSDEHLAT 158
Query: 250 VSLIQERYPQGYWARYVE 267
++ + +P + +
Sbjct: 159 MTTLVNEHPDSKFWVEAQ 176
>gi|304387176|ref|ZP_07369419.1| probable periplasmic protein [Neisseria meningitidis ATCC 13091]
gi|304338743|gb|EFM04854.1| probable periplasmic protein [Neisseria meningitidis ATCC 13091]
Length = 238
Score = 45.6 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 13/72 (18%), Positives = 24/72 (33%)
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
+ + + G + I + D+ A EA+ ++ E L D AR
Sbjct: 155 QRSMYLLLQSRARMGNCESVIEIGGRYANRFKDSPTAPEAIFKIGECQYRLQQKDIARAT 214
Query: 250 VSLIQERYPQGY 261
+ + YP
Sbjct: 215 WRSLIQAYPSSP 226
>gi|256828297|ref|YP_003157025.1| tol-pal system protein YbgF [Desulfomicrobium baculatum DSM 4028]
gi|256577473|gb|ACU88609.1| tol-pal system protein YbgF [Desulfomicrobium baculatum DSM 4028]
Length = 318
Score = 45.6 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 14/117 (11%), Positives = 43/117 (36%), Gaps = 2/117 (1%)
Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
+ L+ + + + + + + A G + + +Y A+ +Q
Sbjct: 201 YQQALESFYAMKYKEAQITWAEFVKGFPKDPLVPNA--VFWQGECFFQMQDYANAVLTYQ 258
Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
V+ + + A+ + ++ L + V+ + +++PQ A+ + +K
Sbjct: 259 KVIEEHKTSNKYTAALLKQGISFYKLKKDQAGKLVLEDLIKKHPQSAEAKRAQAYLK 315
Score = 36.7 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 10/90 (11%), Positives = 30/90 (33%)
Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
+ + +E+Y++A+ + +A + + + FP + ++
Sbjct: 181 STPETQPQAAPQAEVPGQELYQQALESFYAMKYKEAQITWAEFVKGFPKDPLVPNAVFWQ 240
Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNV 130
+ Y A ++ I ++ S
Sbjct: 241 GECFFQMQDYANAVLTYQKVIEEHKTSNKY 270
>gi|313886111|ref|ZP_07819846.1| tetratricopeptide repeat protein [Porphyromonas asaccharolytica
PR426713P-I]
gi|312924457|gb|EFR35231.1| tetratricopeptide repeat protein [Porphyromonas asaccharolytica
PR426713P-I]
Length = 1003
Score = 45.6 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 27/223 (12%), Positives = 58/223 (26%), Gaps = 15/223 (6%)
Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFP-FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
A L ++ + +A + + + + + + Q +Y A +
Sbjct: 470 AQLLSQQGAYKQAAQALTAILSKRAASSKQLQIARYLLGYSQIRQQQYGAATQTLSILLQ 529
Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML-----QYMSRIVERYTNSPYVKG 177
+ + + M R + + + K
Sbjct: 530 EGTLDNTLQADVHARLGDAHYMQGHYTPAVRYYEEAYRLAPDNQVYALYMLSDIEGLKKD 589
Query: 178 ARFYVTVGRNQLAAK---------EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
+ + +A + GR G+ AI F + Y +E+ +
Sbjct: 590 YKAQIAALDKLVARHPNSLYKPRAMYDQGRAMELSGQQAEAIGAFTRLTQEYPQSEYGRK 649
Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
A +L Y A E + PQ A+ +K
Sbjct: 650 AALQLALLYYNRNETSRAIETYKALLAEAPQSGEAKQAYEALK 692
>gi|307822495|ref|ZP_07652726.1| type IV pilus biogenesis/stability protein PilW [Methylobacter
tundripaludum SV96]
gi|307736099|gb|EFO06945.1| type IV pilus biogenesis/stability protein PilW [Methylobacter
tundripaludum SV96]
Length = 253
Score = 45.6 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 38/250 (15%), Positives = 71/250 (28%), Gaps = 15/250 (6%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
K + + V LV SS + + V +L A E
Sbjct: 7 KLINRVALVLLVTALVACGSASSTKSNNSEDVHL-------QLGVRYLSMNKLELAKENL 59
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
++ A +L AF+ + +A E + P+ V +
Sbjct: 60 LLALKNNSDNTQAHNAL---AFLYEKLNQPDKAKEHYETALDLTPDDLGVQNNFGRFLCE 116
Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK----EVEI 196
+ ++ + RA+ L + + + + A +
Sbjct: 117 HGELEEGMELLSRASSNPLNDRQWLALTNAGRCGLSMGQKQQAENYFRQALQLNSTYAAA 176
Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSD-AEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
K + L Y A H E + +A AL + ARE +L+ E
Sbjct: 177 LSEMQKIAYEKGDYWAAKGFLQRYLGVATHTPETLWFAAQAERALGNKELAREYKNLLLE 236
Query: 256 RYPQGYWARY 265
++P A+
Sbjct: 237 KFPLSNEAKK 246
>gi|259909068|ref|YP_002649424.1| tol-pal system protein YbgF [Erwinia pyrifoliae Ep1/96]
gi|224964690|emb|CAX56207.1| conserved uncharacterized protein [Erwinia pyrifoliae Ep1/96]
gi|283479094|emb|CAY75010.1| Hypothetical protein ybgF precursor [Erwinia pyrifoliae DSM 12163]
Length = 265
Score = 45.6 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 14/70 (20%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
++ +Y AI FQ + Y D+ + A L + D+A + + +++P+
Sbjct: 157 EKKQYDNAISAFQAFVKQYPDSTYQPNANYWLGQLNYNKGKKDDAAYYFATVVKKFPKSP 216
Query: 262 WARYVETLVK 271
+ + L+K
Sbjct: 217 --KSADALLK 224
Score = 41.7 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 14/120 (11%), Positives = 39/120 (32%), Gaps = 14/120 (11%)
Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
+++ + V++Y +S Y A +++ K+ A
Sbjct: 157 EKKQYDNAISAFQAFVKQYPDSTYQPNANYWLGQLNYNKGKKD--------------DAA 202
Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
F V+ + + + +A+ ++ +A+ V + + Y A+ +
Sbjct: 203 YYFATVVKKFPKSPKSADALLKVGVIMQEKGDKAKAKAVYQQVIKLYSNSEAAKTAQKRF 262
>gi|194337847|ref|YP_002019641.1| putative lipoprotein [Pelodictyon phaeoclathratiforme BU-1]
gi|194310324|gb|ACF45024.1| putative lipoprotein [Pelodictyon phaeoclathratiforme BU-1]
Length = 298
Score = 45.6 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 26/207 (12%), Positives = 62/207 (29%), Gaps = 2/207 (0%)
Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
++ A + + A E F + + AR + M A + +
Sbjct: 74 LEDDVLFLLAQSYYHSGQYLLAAEMFTKLQQQISSTPYARTAQFMLAKSYEQLSPHFELD 133
Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM--LQYMSRIVERYTNS 172
+ Y + + + Q + ++
Sbjct: 134 QEHTAKAITQFATYLDLYPMVDSSKIASDVTTYRELLKINPDNASYKQSYATATTQFARI 193
Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232
++ A + V R +LA I R Y++ +Y AA + ++ Y D + + A
Sbjct: 194 DTLRYAEKAIPVLREKLAKNTFFIARQYVQLKKYKAAGIFYDELIKRYPDTVYIKPAWEG 253
Query: 233 LVEAYVALALMDEAREVVSLIQERYPQ 259
++ + +A + + + +P
Sbjct: 254 KIDVLMKRKKWFDASQALDQYLQNFPD 280
Score = 43.6 bits (100), Expect = 0.031, Method: Composition-based stats.
Identities = 32/245 (13%), Positives = 66/245 (26%), Gaps = 9/245 (3%)
Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
+ + + G + + E Y KAV ++++ A
Sbjct: 12 LMLLATGLLMSSGCSSSKPAKI-----SATTRVNEAYGKAVKMYDKRDYQGAALGLESLL 66
Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
+ L + A Y +G+Y AA + + Q + +++ SY Q+
Sbjct: 67 FTSRATALEDDVLFLLAQSYYHSGQYLLAAEMFTKLQQQISSTPYARTAQFMLAKSYEQL 126
Query: 145 IRDVPYDQRATKLMLQYMS---RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
DQ T + + + +S Y + + +
Sbjct: 127 SPHFELDQEHTAKAITQFATYLDLYPMVDSSKIASDVTTYRELLKINPDNASYKQSYATA 186
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
R+ + A+ YV L A + +RYP
Sbjct: 187 TTQFARIDTLRYAEKAIPVLREKLAKNTFFI-ARQYVQLKKYKAAGIFYDELIKRYPDTV 245
Query: 262 WARYV 266
+ +
Sbjct: 246 YIKPA 250
>gi|86607598|ref|YP_476360.1| Slt family transglycosylase [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86556140|gb|ABD01097.1| transglycosylase, SLT family [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 711
Score = 45.6 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 25/228 (10%), Positives = 57/228 (25%), Gaps = 9/228 (3%)
Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
D + + +A L+ A + P L A+ Q
Sbjct: 51 DPTQLPQTSTTAFLRAYAALQAGQAQSALKDLQGLEESLPVLREEIWKLRAQAYEQLQDK 110
Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
+ Q + Y L GM +R T L+++ +
Sbjct: 111 ETAQGIWWPQILQEYPHSPV---AAYALWGMGQVDRLRQQFPTHPLTGRALKHLLELNPD 167
Query: 169 YTN------SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
+ + + + R + A + + + + Y
Sbjct: 168 RYDLLRDLAQHHPQTPGLTPLLDRWRQAQEGSLTASDWQILADAYWEQREYGKAARAYGR 227
Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
A + + R ++ +A+ + ++P G A +
Sbjct: 228 APATSQNLYRWGRSHQISREFPQAKAAYQALLAQFPDGPEASLTRRRL 275
>gi|303326957|ref|ZP_07357399.1| TPR domain protein [Desulfovibrio sp. 3_1_syn3]
gi|302862945|gb|EFL85877.1| TPR domain protein [Desulfovibrio sp. 3_1_syn3]
Length = 406
Score = 45.6 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 20/113 (17%), Positives = 35/113 (30%), Gaps = 14/113 (12%)
Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
+ +++Y Y A E IG +G Y A+ +FQ V
Sbjct: 304 EGISRFREFLQQYPQGRY--------------TANAEYWIGECLYAQGNYKEALAQFQTV 349
Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
NY +A+ + + L A + + +P AR +
Sbjct: 350 NTNYPRHHKNADALLKAGMSLSRLGDKPGAAQKYRTLLADFPNSEAARMARSR 402
>gi|312129683|ref|YP_003997023.1| tetratricopeptide tpr_1 repeat-containing protein [Leadbetterella
byssophila DSM 17132]
gi|311906229|gb|ADQ16670.1| Tetratricopeptide TPR_1 repeat-containing protein [Leadbetterella
byssophila DSM 17132]
Length = 996
Score = 45.6 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 28/215 (13%), Positives = 65/215 (30%), Gaps = 22/215 (10%)
Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
+ + +++ L ++ N++ A F+ + + + LL
Sbjct: 597 AKNTFDQFSRTFPNSRLLDEVLFQNGNLAMEAGNYNGAINTFSNILKRQTNSELTAHVLL 656
Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
+ KY A S ++ + ++ +SK +
Sbjct: 657 RRGIAYSNVEKYDNAISDFKQILNKFGKSKYASEAFLG---------------------- 694
Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
++ R + + + + E + +Y AAI F ++
Sbjct: 695 IREALSQANRSEEFFEIAEVYKKNNPEGSSVQGLQFETAKDLFFAEKYDAAISAFTKFIS 754
Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
Y + + EA + E+Y+ L EA + I
Sbjct: 755 QYPGSVYTPEANYLIGESYLGLKKTTEALKYYQTI 789
Score = 40.9 bits (93), Expect = 0.19, Method: Composition-based stats.
Identities = 30/244 (12%), Positives = 64/244 (26%), Gaps = 19/244 (7%)
Query: 45 DVYLDSVTDVRYQREV-YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
+VY + + + + +E A + + A F + +P + ++ +
Sbjct: 713 EVYKKNNPEGSSVQGLQFETAKDLFFAEKYDAAISAFTKFISQYPGSVYTPEANYLIGES 772
Query: 104 Q--------YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
EY++Q Y A+ V
Sbjct: 773 YLGLKKTTEALKYYQTIVNEGQLEYLSQAASRSAGIYFEKKQFEEAARNYNQVVNTTSDQ 832
Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ--------LAAKEVEIGRYYLKRGEYV 207
+ M+ ++ E+ G+ Y+ +
Sbjct: 833 REMIVAYEGWMKSQYELKKYDQTLELAEKILTTGPEVVVGAKNRAELYKGKAYMGMSNWA 892
Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ-GYWARYV 266
+A +F+ + D A EA RL E D + + + + Y W
Sbjct: 893 SAKIQFEKTIELGKDVSAA-EAKYRLGEIQYKQKEYDASIKTMQELASNYSDFLEWYENA 951
Query: 267 ETLV 270
L+
Sbjct: 952 FLLI 955
Score = 37.5 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 29/212 (13%), Positives = 63/212 (29%), Gaps = 21/212 (9%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
D YQ+ Y + V F+ A +YF++ +A ++ L A Y +
Sbjct: 422 PKIDEAYQKLAYSQGVQEYNSGRFANAIQYFDKSLVKVSSRDLAVQAKLWKAESLYQQDQ 481
Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
Q A +L E +T + + Y L + ++ L++
Sbjct: 482 IQAAEALYRELLTSSDKIARLKSQYAL---------GYMSFNNERYSDALRFFQDF---- 528
Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
+ + + N + + + + + + +Y A
Sbjct: 529 KSGGRGEASLQTSLDDANLRIGDCFLMAKNFSQALQVYDDAFKGNTSGKDY--------A 580
Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGY 261
+ + A L +EA+ +P
Sbjct: 581 LYQKGMALRYLGRENEAKNTFDQFSRTFPNSR 612
>gi|206602858|gb|EDZ39339.1| Protein of unknown function [Leptospirillum sp. Group II '5-way
CG']
Length = 264
Score = 45.6 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 18/175 (10%), Positives = 47/175 (26%)
Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
+ + + + + E+ ++ ++K D+ +
Sbjct: 66 WHIYSDKKKKEQQAAALETRAEQMFSKNMQNKKADWASIDQLFEKVVKDYPDSSSAKVAP 125
Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
L L + + + + G ++ E +
Sbjct: 126 LFLASIQNQLAQPQKAVNWLHEGLEKNSGDTKILPFYYESLGVTFMSMKEYDQALAMFQK 185
Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+ + A+ A + + Y L A +Q+++P WA E +K
Sbjct: 186 VTKFQGKTLADAAYYNIGKVYELLNQPALAILNYRKLQKKFPSSPWASEAEAYIK 240
>gi|193215626|ref|YP_001996825.1| tetratricopeptide domain-containing protein [Chloroherpeton
thalassium ATCC 35110]
gi|193089103|gb|ACF14378.1| Tetratricopeptide TPR_2 repeat protein [Chloroherpeton thalassium
ATCC 35110]
Length = 2169
Score = 45.6 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 14/117 (11%), Positives = 36/117 (30%), Gaps = 5/117 (4%)
Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
++ Y N + ++ + + + + I +
Sbjct: 143 YNKAIEEFDEKYLAYAN----ESLKYAEILDKYDKGETSEKPTEPIEPDYGFDKVITLYD 198
Query: 215 LVLANYSDAEHAEEAMARLVEAY-VALALMDEAREVVSLIQERYPQGYWARYVETLV 270
L++ N ++ + +A Y L D+A ++ I +YP + L+
Sbjct: 199 LIINNMPESPYVVDAYYGKAYIYGENLNKKDDAVAILREITRKYPDSRYTIDSYMLI 255
Score = 41.7 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 22/211 (10%), Positives = 58/211 (27%), Gaps = 14/211 (6%)
Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
+ + +R +Y KA+ E+ + A E +
Sbjct: 127 ESKVIDEIVIRQADLLYNKAIEEFDEKYLAYANESLKYAEILDKYDK---------GETS 177
Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
+ + ++ IT Y N V +Y + + +
Sbjct: 178 EKPTEPIEPDYGFDKVITLYDLIINNMPESPYVVDAYYGKAYIYGENLNKKDDAVAILRE 237
Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
I +Y +S Y + + +++ + ++
Sbjct: 238 ITRKYPDSRYTIDSYMLIAEYLFGAPSRQQPRKTIESIPYYKKVLDLVSSKGI----TSK 293
Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQE 255
+ ++++ +L AY + +D+ + I
Sbjct: 294 YYDQSLYKLGWAYFRIGGIDK-KNYEEAIAY 323
>gi|225620444|ref|YP_002721701.1| hypothetical protein BHWA1_01527 [Brachyspira hyodysenteriae WA1]
gi|225215263|gb|ACN83997.1| hypothetical protein BHWA1_01527 [Brachyspira hyodysenteriae WA1]
Length = 417
Score = 45.6 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 24/233 (10%), Positives = 60/233 (25%), Gaps = 25/233 (10%)
Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
+ D +V ++ A +++ A ++ +P + + S
Sbjct: 194 KKETDKPAKAVETNPEIIALFNSAEELKNVKDYENAINAYSNIITSYPNSKYSVYSHFRI 253
Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
+ Y A ++ E N + + + +
Sbjct: 254 GDIYNQKKDYNNAFNMYNEASKLKNSGNNEKAAAIY-------SMGVMKKSENKHDEAIV 306
Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220
Y + ++ Y+ +P E+ + G + L
Sbjct: 307 YFNDVMNNYSQTPLY--------------GNAVYEMADSLKQLGRISDGANILEKSLEKN 352
Query: 221 SDAEHAEEAMARLVEAYVA----LALMDEAREVVSLIQERYPQGYWARYVETL 269
+++ L E Y + ++A + + YP A+Y
Sbjct: 353 VKFSKRGDSILLLAEIYEKGNNNIRDFEKAYKTYNQYLAEYPTSSKAKYANDR 405
>gi|218778517|ref|YP_002429835.1| hypothetical protein Dalk_0662 [Desulfatibacillum alkenivorans
AK-01]
gi|218759901|gb|ACL02367.1| TPR repeat-containing protein [Desulfatibacillum alkenivorans
AK-01]
Length = 876
Score = 45.6 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 19/203 (9%), Positives = 50/203 (24%), Gaps = 3/203 (1%)
Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
E Y +AV F A + + + G ++ + V +
Sbjct: 308 EKYRRAVKQFPNSRF--APQAIVYLVQMYKKVGNYPEAAAYADLVWDKYKDRAMSPDFML 365
Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
+ D + M + + + ++
Sbjct: 366 LRGQALLANGQKDLALGVFDMLLGYYPDSEYVEATLLEKAKVMHEE-RAYKKSLEMLQEI 424
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
R +G Y + A F + + D + ++ +++
Sbjct: 425 EKKDPQARFIYPDFSRYMGENYYQLKANPKARELFFQTVNTFPDTPDKDILFTKIGDSFK 484
Query: 239 ALALMDEAREVVSLIQERYPQGY 261
+ D+A + ++ +P
Sbjct: 485 DQGMQDKAAMIYKMVVSNFPGSD 507
Score = 42.9 bits (98), Expect = 0.045, Method: Composition-based stats.
Identities = 23/209 (11%), Positives = 58/209 (27%), Gaps = 17/209 (8%)
Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
+++ ++ Q + + A L E+ + + PF +
Sbjct: 539 QEIVRNNPDHPLAQVSMIKLARLAHDEKRYEDSVSILLGLLARHPFTKLHDDVREALLAS 598
Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
+ + Y + ++ + + +M + + A +
Sbjct: 599 LEAIFTRDHREKDFAHIVEYYDKVRD--------VVPFEEMPQLMFIVANAYRETGMCSW 650
Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
+ + S + + A + K GE A F+ + Y
Sbjct: 651 ALTQLEKVSRFYDDP---------KPADIMFIMADCNKKVGEIENARRLFETFVLQYPGE 701
Query: 224 EHAEEAMARLVEAYVALALMDEAREVVSL 252
EA +L + Y+ D A + + +
Sbjct: 702 PRFVEAYHQLADIYLERGETDPAIQALRV 730
Score = 40.9 bits (93), Expect = 0.20, Method: Composition-based stats.
Identities = 15/154 (9%), Positives = 40/154 (25%), Gaps = 8/154 (5%)
Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
+ + Y + Y + ++ S +
Sbjct: 211 RYPIKRPLNPATAGHDFSYDGPLLSEANGSGTPDQDLFSKAVEEYKTGQWQDAIRDFSIL 270
Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
Y + A + + +V +++ + + ++
Sbjct: 271 -----EQSYPLSEKLEPAAFLTARAYHGLYGANLTKR---FVDVAEKYRRAVKQFPNSRF 322
Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
A +A+ LV+ Y + EA L+ ++Y
Sbjct: 323 APQAIVYLVQMYKKVGNYPEAAAYADLVWDKYKD 356
Score = 37.5 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 25/209 (11%), Positives = 53/209 (25%), Gaps = 53/209 (25%)
Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
++++ KAV K + A F+ + +P + + ++A +
Sbjct: 243 PDQDLFSKAVEEYKTGQWQDAIRDFSILEQSYPLSEKLEPAAFLTARAYHGLYGANLTKR 302
Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
+ K + + Y+ ++ ++ N
Sbjct: 303 FVDVAEKYRRAVKQFPNSRFAP-------------------QAIVYLVQMYKKVGN---- 339
Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
Y A LV Y D + + M +
Sbjct: 340 ------------------------------YPEAAAYADLVWDKYKDRAMSPDFMLLRGQ 369
Query: 236 AYVALALMDEAREVVSLIQERYPQGYWAR 264
A +A D A V ++ YP +
Sbjct: 370 ALLANGQKDLALGVFDMLLGYYPDSEYVE 398
>gi|157273540|gb|ABV27439.1| probable soluble lytic transglycosylase [Candidatus
Chloracidobacterium thermophilum]
Length = 801
Score = 45.6 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 23/200 (11%), Positives = 53/200 (26%), Gaps = 15/200 (7%)
Query: 64 AVLFLKEQNFSKAYEYFNQC-SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
A + + +A + Q S+ + L + +++ + G++
Sbjct: 177 AESYAAAGDLDRAIAVYRQLASQSREYEARLGVLLRRVGQEAEAQILFRRLLASGKDDAA 236
Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
+ + + + + R T+ ++ +VE
Sbjct: 237 LLAAEQLDAQEDSSLLPAQRLVRARLYLANRHTEGAKRHFRALVE--------------H 282
Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242
Q A +GR + + A+ F Y + E+ + A
Sbjct: 283 VPPVAQRAEALWSLGRAFFIEENWDEAVRWFDRAHREYPTSPEGEKGYYQAGHALQNAGR 342
Query: 243 MDEAREVVSLIQERYPQGYW 262
EA YP +
Sbjct: 343 YREAVARYEAFIAAYPDSEF 362
>gi|119472190|ref|ZP_01614392.1| putative periplasmic protein contains a protein prenylyltransferase
domain [Alteromonadales bacterium TW-7]
gi|119445109|gb|EAW26403.1| putative periplasmic protein contains a protein prenylyltransferase
domain [Alteromonadales bacterium TW-7]
Length = 223
Score = 45.6 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 19/121 (15%), Positives = 46/121 (38%), Gaps = 14/121 (11%)
Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
+ + ++ Y S Y A +++ G+ + + V A
Sbjct: 115 MKDKRYDQAIPEFQTFLKTYPESVYASNAHYWL--------------GQLLTIKNDGVKA 160
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
+ F++V+ Y ++ +AM +L L DE+ ++++ + +YP A+
Sbjct: 161 VDHFRVVVNEYPNSNKRPDAMLKLGTLLKEQGLTDESLKILNELVTQYPSTTAAKLATDR 220
Query: 270 V 270
+
Sbjct: 221 L 221
>gi|332884569|gb|EGK04827.1| hypothetical protein HMPREF9456_03297 [Dysgonomonas mossii DSM
22836]
Length = 998
Score = 45.6 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 30/222 (13%), Positives = 68/222 (30%), Gaps = 22/222 (9%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
S + Y +Y A +++ +S A F + S ++ +
Sbjct: 497 SPSQKNYPLALYNLAYAQFQDKVYSSALNNFKKYISAESNKQSPNYSDALNRIGDINLYN 556
Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
+ + +N DY + ++ ++ +Y
Sbjct: 557 RNFSEAERYYAQAVSSNPENADYSEFQKAFVLGLQRNYSGKVTA--------LNSMMAKY 608
Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
NS Y+ A + E R + + + AI + +L ++ + A++A
Sbjct: 609 PNSQYIDDALY--------------EKSRALVMQNKEQEAISVLEKMLKDHPKSNLAQKA 654
Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+L + Y ++ E + YP AR ++
Sbjct: 655 GVQLGQLYFNTNNPRKSAEAYKQVIANYPNSEEARTAIESLE 696
Score = 42.5 bits (97), Expect = 0.058, Method: Composition-based stats.
Identities = 24/239 (10%), Positives = 57/239 (23%), Gaps = 17/239 (7%)
Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA--- 101
D Q +++ V ++ + A FN + R
Sbjct: 416 IKSPDRQILEAKQIILFQSGVQNFIDKRYDLAANDFNATINMGSYNAEVRNEAYFWRGDI 475
Query: 102 -------------FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
+ Y + + + +
Sbjct: 476 AYRSADYGTAARDYTAYIGQASPSQKNYPLALYNLAYAQFQDKVYSSALNNFKKYISAES 535
Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK-RGEYV 207
L + I N + + A + L + Y
Sbjct: 536 NKQSPNYSDALNRIGDINLYNRNFSEAERYYAQAVSSNPENADYSEFQKAFVLGLQRNYS 595
Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
+ ++A Y ++++ ++A+ A V EA V+ + + +P+ A+
Sbjct: 596 GKVTALNSMMAKYPNSQYIDDALYEKSRALVMQNKEQEAISVLEKMLKDHPKSNLAQKA 654
>gi|332300508|ref|YP_004442429.1| Tetratricopeptide TPR_2 repeat-containing protein [Porphyromonas
asaccharolytica DSM 20707]
gi|332177571|gb|AEE13261.1| Tetratricopeptide TPR_2 repeat-containing protein [Porphyromonas
asaccharolytica DSM 20707]
Length = 1003
Score = 45.6 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 27/223 (12%), Positives = 58/223 (26%), Gaps = 15/223 (6%)
Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFP-FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
A L ++ + +A + + + + + + Q +Y A +
Sbjct: 470 AQLLSQQGAYKQAAQALTAILSKRAASSKQLQIARYLLGYSQIRQQQYGAATQTLSILLQ 529
Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML-----QYMSRIVERYTNSPYVKG 177
+ + + M R + + + K
Sbjct: 530 EGTLDNTLQADVHARLGDAHYMQGHYTPAVRYYEEAYRLAPDNQVYALYMLSDIEGLKKD 589
Query: 178 ARFYVTVGRNQLAAK---------EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
+ + +A + GR G+ AI F + Y +E+ +
Sbjct: 590 YKAQIAALDKLVARHPNSLYKPRAMYDQGRAMELSGQQAEAIGAFTRLTQEYPQSEYGRK 649
Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
A +L Y A E + PQ A+ +K
Sbjct: 650 AALQLALLYYNRNETSRAIETYKALLAEAPQSGEAKQAYEALK 692
>gi|218263597|ref|ZP_03477671.1| hypothetical protein PRABACTJOHN_03360 [Parabacteroides johnsonii
DSM 18315]
gi|218222607|gb|EEC95257.1| hypothetical protein PRABACTJOHN_03360 [Parabacteroides johnsonii
DSM 18315]
Length = 667
Score = 45.6 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 33/225 (14%), Positives = 63/225 (28%), Gaps = 7/225 (3%)
Query: 35 LVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR 94
+V + + + ++ +Y +A K N + E F
Sbjct: 433 IVQFSQMFNDRQLIEKSLRESEAELLYARAAHSFKSGNVKETVEAFVAAVSKRNELEKPE 492
Query: 95 KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
L+ +Q +Q L EE Q K + YYL+G D+ R+
Sbjct: 493 VQRLLRMKLQTMNTGREQIKKLREEIHAQREIQKEYAHEYYLMGNECITKAHDLNAAIRS 552
Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
L+ V+ + L + + R + + +
Sbjct: 553 FDKALKLYPEFVDAWVRKGVTLLDLGDGFQAVTCLNEAVRLNPKSFKARYNRGKSYLQLK 612
Query: 215 LVLANYSDA-------EHAEEAMARLVEAYVALALMDEAREVVSL 252
SD A L EA++ + + AR+ +
Sbjct: 613 YYDEAVSDFMKAVDLKPKHAAAHEYLAEAFLHIGEEELARQHQDI 657
>gi|257457649|ref|ZP_05622816.1| tetratricopeptide repeat domain protein [Treponema vincentii ATCC
35580]
gi|257445035|gb|EEV20111.1| tetratricopeptide repeat domain protein [Treponema vincentii ATCC
35580]
Length = 715
Score = 45.6 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 23/85 (27%), Gaps = 6/85 (7%)
Query: 12 FEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQ 71
F+ W +++F S L+ S V +Y+ +L
Sbjct: 600 FKYWF--MHRFLPVAVMSAIALILIFCISVLSWQFIYKPV----TAESLYKTGYAYLDNG 653
Query: 72 NFSKAYEYFNQCSRDFPFAGVARKS 96
+ A E FNQ
Sbjct: 654 QYETAIEKFNQAGEYKRKKKWYFSY 678
>gi|322420213|ref|YP_004199436.1| Sporulation domain-containing protein [Geobacter sp. M18]
gi|320126600|gb|ADW14160.1| Sporulation domain-containing protein [Geobacter sp. M18]
Length = 506
Score = 45.6 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 11/68 (16%), Positives = 27/68 (39%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
R + + Y A + +L + EE + L ++Y A + ++A +
Sbjct: 31 MFAQARNHYQESNYYFASTWLERILKKFPATPQREEVLMMLAKSYAATSRDEKAIRTLKT 90
Query: 253 IQERYPQG 260
+ + +P+
Sbjct: 91 LLKDFPKS 98
>gi|325269998|ref|ZP_08136607.1| hypothetical protein HMPREF9141_1817 [Prevotella multiformis DSM
16608]
gi|324987721|gb|EGC19695.1| hypothetical protein HMPREF9141_1817 [Prevotella multiformis DSM
16608]
Length = 1130
Score = 45.6 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 15/178 (8%), Positives = 40/178 (22%), Gaps = 1/178 (0%)
Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
+ ++ A + ++ + + + +
Sbjct: 491 WYFYSPTAVQQGKITFQQLWGKRENIDNWQRINQGVVGRIGDTKTPIELTDQQRDSILQA 550
Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
+ L+ Y + R + +
Sbjct: 551 EARQDSIDNARDSLKN-DPHKREYYLAQIPFTPAQLEASNRILEDGLHHSGVIFKDRLDN 609
Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
+ + V +Y D E ++ L Y+ A V+ + +YP+ W
Sbjct: 610 LRLSEKALRRVSDDYPDYEQMDDVYYHLYLLYMRKGDQQMADSYVARLSRKYPKSKWT 667
Score = 41.7 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 29/287 (10%), Positives = 72/287 (25%), Gaps = 40/287 (13%)
Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLK-------- 69
+ + +++ ++ + G +++ Y A ++
Sbjct: 4 KTIRHIISLLPAVVLLAAAGCSTKNNTSQSRWWQAFNTRYNVYYNGAQAYIDGSLEKEKG 63
Query: 70 -----------------------EQNFSKAYEYFNQCSRDFPFAGVARKSLLMS-AFVQY 105
+ +F +A E + +
Sbjct: 64 NKDNFTELIPLYPVGNKNSRELGKGSFDRAIEKAEKAIARHSVKKRPEWTKNRRKTERDI 123
Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
++ + S+ + + ++A M R ++++
Sbjct: 124 EWLSRREYNPFLWKAWMLMGRSQFHEGAFEEAAATFAYMSRIYKGQPAIYGKARAWLAKC 183
Query: 166 VERYTNSPYVKGARFYVTVGR-NQLAAKEVEIGR--YYLKRGEYVAAIPRFQLVLANYSD 222
+ + + A KE + YYL GE A+P Q V+ +
Sbjct: 184 YIEQGWLYDAEDIIRNMQRDSLDWRAVKEWDYTYADYYLHSGELSKAVPYLQRVIKHEMR 243
Query: 223 AEHAEEAMARLVEAYVALALMDEAREVV-SLIQERYPQGYWARYVET 268
+ + L + AL EA + +I+ P
Sbjct: 244 RKQKARELYLLGQVLAALGRNTEAYKAFQRVIRANPP----YELAFN 286
>gi|53802992|ref|YP_115281.1| type IV pilus biogenesis protein PilF [Methylococcus capsulatus
str. Bath]
gi|53756753|gb|AAU91044.1| putative type IV pilus biogenesis protein PilF [Methylococcus
capsulatus str. Bath]
Length = 255
Score = 45.6 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 30/251 (11%), Positives = 61/251 (24%), Gaps = 9/251 (3%)
Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVY-EKAVLFLKEQNFSKAYEYFN--- 81
+ + + + R + +VY +K V ++ + A E
Sbjct: 5 LALTALLGAIAACATPEQRPYATNDPYGELSTADVYVQKGVRYMAQGALEVALEDLKHAV 64
Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
+ A A L A + + A + +
Sbjct: 65 ELDPANSDAHDALAILYEKLGRTGEADLHFREALTLNPENYSAYNNYGRFLCHTGHTEEA 124
Query: 142 AQMIRDVPYDQRATKLMLQ--YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
+ + + R + + +E+
Sbjct: 125 LARFEVAYSTPLYPQPWIPLSNAGTCLRRAGRTAEAEPYLRRALEKNPGYPPALLEMAHV 184
Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
L+ +Y++ Q A D E + V+ +AL EAR + I +P
Sbjct: 185 SLETRQYLSTRAFLQRYQAVAGDTP---ETLWLGVQTELALGDAAEARRLADRIGVDFPD 241
Query: 260 GYWARYVETLV 270
A L
Sbjct: 242 SGEAVQARRLF 252
>gi|327403579|ref|YP_004344417.1| hypothetical protein Fluta_1587 [Fluviicola taffensis DSM 16823]
gi|327319087|gb|AEA43579.1| Tetratricopeptide TPR_1 repeat-containing protein [Fluviicola
taffensis DSM 16823]
Length = 1028
Score = 45.6 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 27/224 (12%), Positives = 68/224 (30%), Gaps = 15/224 (6%)
Query: 43 SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102
+ D YQ + + V ++ + A + F + V+ K++ SA
Sbjct: 414 DQISIKDIKLKSAYQLIAFNRGVELFQKSEYQNAIKAFELVDKYPISPEVSAKAMYWSAD 473
Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
++ KY +A +++ + + YA + P
Sbjct: 474 AEFYLKKYSEAVKKYSQFMGMSGSQSSGLRSDAMYNTGYAYLALKDP------------- 520
Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
I + Y+K + + + + K + + A
Sbjct: 521 --IKTQDAFRNYLKESNLTDLNKKADAHMRVGDEYFRNPKADNGINQLAIDNYKAAYNLK 578
Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
+ ++A+ + Y + DE + ++ + YP+ + +
Sbjct: 579 VGYDDQALYYMARTYGYMGKSDEKIQSLTDLINNYPKSRYMQRS 622
Score = 44.8 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 25/232 (10%), Positives = 60/232 (25%), Gaps = 15/232 (6%)
Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
++ V ++ + +Y A + +S+A + ++Q S
Sbjct: 447 AIKAFELVDKYPISPEVSAKAMYWSADAEFYLKKYSEAVKKYSQFMGMSG-------SQS 499
Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
+L + TQ + A V +
Sbjct: 500 SGLRSDAMYNTGYAYLALKDPIKTQDAFRNYLKESNLTDLNKKADAHMRVGDEYFRNPKA 559
Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
++++ + Y + + R Y G+ I ++
Sbjct: 560 DNGINQLAIDNYKAAYNLKVGYDDQALY--------YMARTYGYMGKSDEKIQSLTDLIN 611
Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
NY + + + ++ + Y +D+A I YP +
Sbjct: 612 NYPKSRYMQRSIEEIALVYYQRENLDKAERYYKQIISDYPTSSRVPEAYHYL 663
>gi|323697640|ref|ZP_08109552.1| tol-pal system protein YbgF [Desulfovibrio sp. ND132]
gi|323457572|gb|EGB13437.1| tol-pal system protein YbgF [Desulfovibrio desulfuricans ND132]
Length = 318
Score = 45.6 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 14/84 (16%), Positives = 28/84 (33%)
Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
+ G Y +Y AI F+ V + + A A+ ++ +
Sbjct: 220 DDFLARYPKNDLTPNALYWKGETYYSEQDYAQAILAFKEVTGRFPKHDKAAAALLKIGMS 279
Query: 237 YVALALMDEAREVVSLIQERYPQG 260
Y + D A + + E +P+
Sbjct: 280 YDRVGDPDNAIFYLRALVEDFPKS 303
Score = 40.5 bits (92), Expect = 0.25, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 28/82 (34%), Gaps = 2/82 (2%)
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
A E G G + AA F LA Y + A+ E Y + +A
Sbjct: 196 ATALYEKGYAQYNAGAFPAARQTFDDFLARYPKNDLTPNALYWKGETYYSEQDYAQAILA 255
Query: 250 VSLIQERYPQGYWARYVETLVK 271
+ R+P+ + L+K
Sbjct: 256 FKEVTGRFPKHD--KAAAALLK 275
>gi|332707120|ref|ZP_08427178.1| glycosyltransferase [Lyngbya majuscula 3L]
gi|332354145|gb|EGJ33627.1| glycosyltransferase [Lyngbya majuscula 3L]
Length = 1933
Score = 45.6 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 27/201 (13%), Positives = 55/201 (27%), Gaps = 8/201 (3%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
++A +LK++ + +A + + P K + + E
Sbjct: 176 QQAQTYLKQRQWQQAIAACERAIKIAPDTAQVYKIWGNALQFMGQTTEAMGYYGQALEIE 235
Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL---MLQYMSRIVERYTNSPYVKGA 178
+ E Y + I + ++++ N V
Sbjct: 236 PDFAEVYANLGSLYAGQQDWQHAIAYYQKAIELKPDLAGAYRNLAKVWTEVGNQKEVLKC 295
Query: 179 RFYVTVGRNQLAAKEVEI--GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
++ + A E + G K G AI ++ V+ + A L EA
Sbjct: 296 CYHQLMLELDKAKPEDYLNLGHQLFKEGLVTEAIACYRQVIERNPQSVV---AYQNLAEA 352
Query: 237 YVALALMDEAREVVSLIQERY 257
EA + + Y
Sbjct: 353 LNRQGKWQEANVYYRKLLQFY 373
>gi|28198798|ref|NP_779112.1| hypothetical protein PD0896 [Xylella fastidiosa Temecula1]
gi|182681497|ref|YP_001829657.1| tol-pal system protein YbgF [Xylella fastidiosa M23]
gi|28056889|gb|AAO28761.1| conserved hypothetical protein [Xylella fastidiosa Temecula1]
gi|182631607|gb|ACB92383.1| tol-pal system protein YbgF [Xylella fastidiosa M23]
Length = 271
Score = 45.6 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 27/70 (38%), Gaps = 2/70 (2%)
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
K +Y A F L Y + + A+ L E+Y A+ A + RYP
Sbjct: 156 KNSKYADAAELFMSFLQLYPNGVYTPNALYWLGESYYAMHDFVSAEAQFRTLLSRYPTHD 215
Query: 262 WARYVETLVK 271
+ +L+K
Sbjct: 216 --KASGSLLK 223
>gi|222054652|ref|YP_002537014.1| tol-pal system protein YbgF [Geobacter sp. FRC-32]
gi|221563941|gb|ACM19913.1| tol-pal system protein YbgF [Geobacter sp. FRC-32]
Length = 241
Score = 45.6 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 28/253 (11%), Positives = 76/253 (30%), Gaps = 19/253 (7%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA--Y 77
+ + I + L G D+ + ++ + E +A + + + A
Sbjct: 1 MRVWIMIVVVVFFALLAGCGSN---DLVVRKQMEMEARIEQLAQANVSANTRLTTLATEV 57
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
+ A K + + + A + ++
Sbjct: 58 KELQSRLNASTADIDAMKPGMAELKASLESIHEKVAELNNPKVSKIEVVNREPSAAEGDS 117
Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
+ + + ++ Y +S YV A ++ +G
Sbjct: 118 AHQDTYVKAFGLFSANNYNAAIDAFEAFMKAYPDSEYVGNAMYW--------------VG 163
Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
Y + Y A+ F V++ + D +AM ++ +++ +A+E + + +++
Sbjct: 164 ECYYTQHNYNEALESFSKVISTFPDGNKVPDAMLKVGYTLISMNEPAKAKESLQALVDKF 223
Query: 258 PQGYWARYVETLV 270
P+ A +
Sbjct: 224 PKSQAAAKAREKL 236
>gi|124266418|ref|YP_001020422.1| hypothetical protein Mpe_A1225 [Methylibium petroleiphilum PM1]
gi|124259193|gb|ABM94187.1| hypothetical protein Mpe_A1225 [Methylibium petroleiphilum PM1]
Length = 941
Score = 45.6 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 19/146 (13%), Positives = 42/146 (28%), Gaps = 1/146 (0%)
Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
D ++ + + + + +E +P A
Sbjct: 22 CAGKRSGTPDDEPTLRSLAGREIRVQQDAGIAGSEEQAIAAYRKFLEVAPGAPQRAEAMR 81
Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
+ + A K + +Y AAI +Q L Y + + +L A
Sbjct: 82 RLGDLEMESADKR-SVEATATSGPDYRAAIASYQGYLKAYPKDPGNDRVLYQLARAQEQG 140
Query: 241 ALMDEAREVVSLIQERYPQGYWARYV 266
++ A + + + + YPQ +
Sbjct: 141 GELEVALKTLDRLVQDYPQTAYRDEA 166
>gi|327393168|dbj|BAK10590.1| TPR domain protein YbgF [Pantoea ananatis AJ13355]
Length = 268
Score = 45.6 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
++ +Y AI Q + Y D+ + A L + + D+A + + ++YP+
Sbjct: 160 EKKQYDQAIAALQAWVKRYPDSTYQPNANYWLGQLFYNKGKKDDAAYYYATVVKQYPKSP 219
Query: 262 WARYVETLVK 271
+ E L+K
Sbjct: 220 --KAAEALLK 227
Score = 43.6 bits (100), Expect = 0.031, Method: Composition-based stats.
Identities = 18/120 (15%), Positives = 42/120 (35%), Gaps = 14/120 (11%)
Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
+++ + + V+RY +S Y A +++ K+ A
Sbjct: 160 EKKQYDQAIAALQAWVKRYPDSTYQPNANYWLGQLFYNKGKKD--------------DAA 205
Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
+ V+ Y + A EA+ ++ +A+ V + + YP A+ + +
Sbjct: 206 YYYATVVKQYPKSPKAAEALLKVGVIMQEKNDTAKAKAVYQQVIKLYPDTESAKQAQKRL 265
>gi|291616742|ref|YP_003519484.1| YbgF [Pantoea ananatis LMG 20103]
gi|291151772|gb|ADD76356.1| YbgF [Pantoea ananatis LMG 20103]
Length = 268
Score = 45.6 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
++ +Y AI Q + Y D+ + A L + + D+A + + ++YP+
Sbjct: 160 EKKQYDQAIAALQAWVKRYPDSTYQPNANYWLGQLFYNKGKKDDAAYYYATVVKQYPKSP 219
Query: 262 WARYVETLVK 271
+ E L+K
Sbjct: 220 --KAAEALLK 227
Score = 43.6 bits (100), Expect = 0.031, Method: Composition-based stats.
Identities = 18/120 (15%), Positives = 42/120 (35%), Gaps = 14/120 (11%)
Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
+++ + + V+RY +S Y A +++ K+ A
Sbjct: 160 EKKQYDQAIAALQAWVKRYPDSTYQPNANYWLGQLFYNKGKKD--------------DAA 205
Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
+ V+ Y + A EA+ ++ +A+ V + + YP A+ + +
Sbjct: 206 YYYATVVKQYPKSPKAAEALLKVGVIMQEKNDTAKAKAVYQQVIKLYPDTESAKQAQKRL 265
>gi|30248244|ref|NP_840314.1| TPR repeat-containing protein [Nitrosomonas europaea ATCC 19718]
gi|30180129|emb|CAD84131.1| TPR repeat [Nitrosomonas europaea ATCC 19718]
Length = 275
Score = 45.6 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 19/72 (26%), Positives = 28/72 (38%)
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
+ +K G+Y A+ F+ LA Y + A A + AY AL D+A
Sbjct: 154 QRNRYDAAYASIKSGDYSGAVTGFESFLAQYPQSALAPSAAYWVGNAYYALRDFDKAITA 213
Query: 250 VSLIQERYPQGY 261
+ E YP
Sbjct: 214 QQRLIEIYPGSP 225
Score = 45.2 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 11/94 (11%), Positives = 29/94 (30%)
Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
+ + +G Y ++ AI Q ++ Y + + + + +
Sbjct: 178 ESFLAQYPQSALAPSAAYWVGNAYYALRDFDKAITAQQRLIEIYPGSPKVADGLLNMASS 237
Query: 237 YVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
+ AR+ + + YP A + +
Sbjct: 238 QAEMGQKAAARKTLEKLIASYPGTEAATKAKQRL 271
>gi|319953427|ref|YP_004164694.1| tetratricopeptide tpr_1 repeat-containing protein [Cellulophaga
algicola DSM 14237]
gi|319422087|gb|ADV49196.1| Tetratricopeptide TPR_1 repeat-containing protein [Cellulophaga
algicola DSM 14237]
Length = 594
Score = 45.6 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 32/247 (12%), Positives = 82/247 (33%), Gaps = 10/247 (4%)
Query: 30 IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQN-------FSKAYEYFNQ 82
IA + +++ + + + Y KA L + + F++A YF+Q
Sbjct: 339 IAYANFLTFQKNNPEKAIVILKKSLELPLNTYGKAYLKMALGDILVYDQKFNQALIYFSQ 398
Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
++ VA+ + A + G ++ A + + + + D + + +S
Sbjct: 399 IQQELKNDVVAQNARFKVAQTSFYKGDFEWALTQLKVLRSSTSQLIANDAMQLSLLISDN 458
Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
+ + + ++ + G ++ G+ K
Sbjct: 459 SLEDSTQTALKIYAKA--DLLAYQKKNKEAIATLELILKDHKGEKIEDEALLKQGQLLEK 516
Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL-ALMDEAREVVSLIQERYPQGY 261
++ A +Q ++ Y + A++A + + Y +++A+E I Y Y
Sbjct: 517 LNDFDRAKFNYQKIIEFYGNDILADDAYFAIAQLYENQFNNIEKAKESYEKIIYNYQDSY 576
Query: 262 WARYVET 268
+
Sbjct: 577 YFPQARK 583
>gi|325107331|ref|YP_004268399.1| Tetratricopeptide TPR_1 repeat-containing protein [Planctomyces
brasiliensis DSM 5305]
gi|324967599|gb|ADY58377.1| Tetratricopeptide TPR_1 repeat-containing protein [Planctomyces
brasiliensis DSM 5305]
Length = 1054
Score = 45.6 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 32/251 (12%), Positives = 74/251 (29%), Gaps = 23/251 (9%)
Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
I ++ V + Y + ++ + A +
Sbjct: 12 FFALLLILCGQVLSLSSS---------VALAAPADDEYTLGITLYGQKRWDLAADTLKNY 62
Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
+P + A + KY +A ++ +++ +P++KN Y V
Sbjct: 63 LETYPDHENVPLGKVYLAQSYVNQQKYAEARTILRDFLKAHPQNKNAAQAQYRVAECSYF 122
Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSP----YVKGARFYVTVGRNQLAAKEVEIGRY 199
+ + + Q + + + Y++ + + + + GR+
Sbjct: 123 LDDYKAAIKDFQAFLDQNPNDALSEWALPYLADSYLRDGQPGKAELSFKQSLQTFPEGRF 182
Query: 200 YLKRGEYVAAIPRFQLVLANY----------SDAEHAEEAMARLVEAYVALALMDEAREV 249
+A Q + D + A EA+ L Y + A EV
Sbjct: 183 QEDSLFGLARAYELQNEPKSAIAEYQKLIALPDGDRAAEALVNLGMLYFQQQNYNLAAEV 242
Query: 250 VSLIQERYPQG 260
+L+ + YP+
Sbjct: 243 FTLLAKDYPES 253
Score = 41.7 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 21/220 (9%), Positives = 61/220 (27%), Gaps = 11/220 (5%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
+ + Y A ++ A + F P ++ +L A G+
Sbjct: 104 PQNKNAAQAQYRVAECSYFLDDYKAAIKDFQAFLDQNPNDALSEWALPYLADSYLRDGQP 163
Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK-----------LML 159
+A ++ + +PE + + + + +Y K L
Sbjct: 164 GKAELSFKQSLQTFPEGRFQEDSLFGLARAYELQNEPKSAIAEYQKLIALPDGDRAAEAL 223
Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219
+ + + N + + + + + +
Sbjct: 224 VNLGMLYFQQQNYNLAAEVFTLLAKDYPESSLVPLANLNAGYAYYSLNQWDKAIERLELA 283
Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
+ ++ A L + Y + +D+A + + +++ P
Sbjct: 284 KTSEAYSATAQYWLAQTYKSQGQIDKAIQQLEELRQNNPS 323
Score = 41.3 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 32/204 (15%), Positives = 65/204 (31%), Gaps = 16/204 (7%)
Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
A ++ +Q +++A + P A ++ A Y Y+ A + ++ Q
Sbjct: 80 AQSYVNQQKYAEARTILRDFLKAHPQNKNAAQAQYRVAECSYFLDDYKAAIKDFQAFLDQ 139
Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI---------------VER 168
P ++ + + K LQ ++
Sbjct: 140 NPNDALSEWA-LPYLADSYLRDGQPGKAELSFKQSLQTFPEGRFQEDSLFGLARAYELQN 198
Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
S + + ++ A V +G Y ++ Y A F L+ +Y ++
Sbjct: 199 EPKSAIAEYQKLIALPDGDRAAEALVNLGMLYFQQQNYNLAAEVFTLLAKDYPESSLVPL 258
Query: 229 AMARLVEAYVALALMDEAREVVSL 252
A AY +L D+A E + L
Sbjct: 259 ANLNAGYAYYSLNQWDKAIERLEL 282
Score = 40.2 bits (91), Expect = 0.34, Method: Composition-based stats.
Identities = 21/211 (9%), Positives = 56/211 (26%), Gaps = 10/211 (4%)
Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
+ +Y+ A + +A + Q K++ + + AG + AA+
Sbjct: 571 QALYQLAESAYAGSAWERAERLYRQIVDAEAPPEWTIKAMSGLGWTLFEAGDFAGAAAAF 630
Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
++ +PES+ M + +++ +
Sbjct: 631 DKLQQSFPESRQAAA-------DAGYMRGMAELRAERLEQAAGIFMETADKFQADESAEQ 683
Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA--EEAMARLVE 235
+ A +Q + ++ ++ +
Sbjct: 684 GDEINYIAYRAAREAARTYRSLENTNKAADAYRVAYQQLSKQ-PESRQTNLDKLLDEWGL 742
Query: 236 AYVALALMDEAREVVSLIQERYPQGYWARYV 266
+ DEA V ++ E+ P+ +
Sbjct: 743 LHYEAGQYDEADAVFRILVEKCPKSDRSDDA 773
Score = 36.3 bits (81), Expect = 4.3, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 29/89 (32%)
Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
A + + +Y AAI FQ L + +E A+ L ++Y
Sbjct: 98 DFLKAHPQNKNAAQAQYRVAECSYFLDDYKAAIKDFQAFLDQNPNDALSEWALPYLADSY 157
Query: 238 VALALMDEAREVVSLIQERYPQGYWARYV 266
+ +A + +P+G +
Sbjct: 158 LRDGQPGKAELSFKQSLQTFPEGRFQEDS 186
>gi|108758617|ref|YP_633296.1| tol-pal system protein YbgF [Myxococcus xanthus DK 1622]
gi|108462497|gb|ABF87682.1| tol-pal system protein YbgF [Myxococcus xanthus DK 1622]
Length = 323
Score = 45.6 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 40/97 (41%), Gaps = 2/97 (2%)
Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
Y + + + A +G Y + A+ + VL ++ AE A E+ R
Sbjct: 214 YNEFMKKWAKDPLVGDAH--FGLGETYFSESKCREALFEYGKVLQDFPKAESAPESYLRS 271
Query: 234 VEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
+ + L + +E+R + + + YP+ A+ + +
Sbjct: 272 SDCFAQLKMKEESRLALEELIKSYPKSAEAKTAKERI 308
>gi|309791748|ref|ZP_07686238.1| Lytic transglycosylase catalytic [Oscillochloris trichoides DG6]
gi|308226241|gb|EFO79979.1| Lytic transglycosylase catalytic [Oscillochloris trichoides DG6]
Length = 787
Score = 45.2 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 27/66 (40%)
Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
+ + + GE A +Q ANY D A EA+ R + L A + +
Sbjct: 361 DWIQTLGQSGEVERASVAYQEYAANYPDDPRAPEALDRAAQLRERLGDSAGALAIQRTLG 420
Query: 255 ERYPQG 260
ERYPQ
Sbjct: 421 ERYPQS 426
>gi|120436880|ref|YP_862566.1| hypothetical protein GFO_2543 [Gramella forsetii KT0803]
gi|117579030|emb|CAL67499.1| conserved hypothetical protein, secreted [Gramella forsetii KT0803]
Length = 1006
Score = 45.2 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 27/243 (11%), Positives = 67/243 (27%), Gaps = 21/243 (8%)
Query: 39 ERQSSRDVYLDSVTDVRYQREVYEK-----AVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93
+ + L ++ Y+K + E+++ +A + F++ ++ +
Sbjct: 402 SKNYEEAMRLLENNRNFSDKQAYQKVAYFYGLELYDEEDYYEAIKNFDKALKEPRDQNIT 461
Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153
++ A +Y+ + A E+ +Y + YA ++
Sbjct: 462 ARATFWKAESEYNVNRMDDAILGYREFKGMSAARNTDEYEDLDYNIGYAYFKKNDYSQAV 521
Query: 154 ATKLMLQYM----------------SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
P ++ + + G + +
Sbjct: 522 NYFKSYASSSNAEGAKKNDALLRLGDTYYVTSQYWPAMEAYQNAINNGVSNADYAAFQKA 581
Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
Y I Y + + ++AM L YVA +A + + +
Sbjct: 582 ISYGFVNRNDTKIEELNSFTGKYPRSPYRDDAMYELGNTYVASNNTTQAIQSYNRLIRDV 641
Query: 258 PQG 260
PQ
Sbjct: 642 PQS 644
Score = 43.6 bits (100), Expect = 0.025, Method: Composition-based stats.
Identities = 33/216 (15%), Positives = 65/216 (30%), Gaps = 25/216 (11%)
Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ-CSRDFPFAGVARKSLLMSAFVQYSAGKY 110
Y+ Y + K+ ++S+A YF S +LL Y +Y
Sbjct: 496 NTDEYEDLDYNIGYAYFKKNDYSQAVNYFKSYASSSNAEGAKKNDALLRLGDTYYVTSQY 555
Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
A + I + + + + ++ ++ +Y
Sbjct: 556 WPAMEAYQNAINNGVSNADYAAFQKAISYGFVNRNDTK----------IEELNSFTGKYP 605
Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
SPY A + E+G Y+ AI + ++ + + +AM
Sbjct: 606 RSPYRDDAMY--------------ELGNTYVASNNTTQAIQSYNRLIRDVPQSALVPKAM 651
Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
R Y ++A E + + YP A+
Sbjct: 652 LRQGLIYYNNNDGNKALERLRKVVADYPNTPEAKQA 687
>gi|257459072|ref|ZP_05624191.1| TPR repeat-containing protein [Campylobacter gracilis RM3268]
gi|257443457|gb|EEV18581.1| TPR repeat-containing protein [Campylobacter gracilis RM3268]
Length = 276
Score = 45.2 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 13/101 (12%), Positives = 34/101 (33%)
Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
+ + K Y+ + A +G G Y AI ++ +++ ++
Sbjct: 173 LYAKKDYSGAKERYNYLVSKNYKPAKANYMLGEISYFSGSYAEAINYYKKSISHNESQDY 232
Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
+ + ++ + D A + ++ YP A+
Sbjct: 233 TPKLLYHTAISFDKIGDKDSANKFYKALKASYPDSKEAKAA 273
>gi|218438120|ref|YP_002376449.1| hypothetical protein PCC7424_1130 [Cyanothece sp. PCC 7424]
gi|218170848|gb|ACK69581.1| TPR repeat-containing protein [Cyanothece sp. PCC 7424]
Length = 271
Score = 45.2 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 27/244 (11%), Positives = 57/244 (23%), Gaps = 7/244 (2%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + + +L + E+Y K V L ++ A
Sbjct: 1 MMQKIRLMGILAIFTYLCSLSPLAHAQNQPSQP-QELNAVEIYNKGVDKLSAGDYQGAIA 59
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
F Q + P ++ + A I + Y
Sbjct: 60 DFTQAIQLAPN-DADAYYNRAYGYLILGNFEGAIADYTKAVEINPNYTYAYGNRCYVYFL 118
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVER-YTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
+ + + + + A A +
Sbjct: 119 SKNYEAAVKDCTTAISQETNYADFYIYRGNAKSGLNQDQEALADYNKAIELAANNPKTLA 178
Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDA----EHAEEAMARLVEAYVALALMDEAREVVSLI 253
+ Y RG + Q +A+YS++ +A Y L EA + +
Sbjct: 179 KAYYNRGLVHNGLENHQQAIADYSESIRLNPDDGDAYYNRGVTYYGLGNNQEAITDLEMA 238
Query: 254 QERY 257
+ +
Sbjct: 239 AQLF 242
>gi|218885367|ref|YP_002434688.1| tol-pal system protein YbgF [Desulfovibrio vulgaris str. 'Miyazaki
F']
gi|218756321|gb|ACL07220.1| tol-pal system protein YbgF [Desulfovibrio vulgaris str. 'Miyazaki
F']
Length = 333
Score = 45.2 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 9/114 (7%), Positives = 36/114 (31%), Gaps = 5/114 (4%)
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKE-----VEIGRYYLKRGEYVAAIPRFQLV 216
+ + + Y + + K G ++ ++ + ++ V
Sbjct: 216 YDQGMTAFNERRYKDSVKAFTDFTNTFGDHKLTSNAWFWQGEANFQQQDFARSALAYEQV 275
Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
++ Y + ++ + + L D + + + ++ P A+ + +
Sbjct: 276 ISKYPKSPKYASSLLKQGICFYKLGKKDAGKVRLEELIKKLPDSPEAQRAKKFL 329
>gi|317153576|ref|YP_004121624.1| tol-pal system protein YbgF [Desulfovibrio aespoeensis Aspo-2]
gi|316943827|gb|ADU62878.1| tol-pal system protein YbgF [Desulfovibrio aespoeensis Aspo-2]
Length = 296
Score = 45.2 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 14/84 (16%), Positives = 28/84 (33%)
Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
G Y + +Y AI F+ V + Y + A+ ++ +
Sbjct: 198 DEFLKKYSSDGLTPNALYWKGETYYSQKDYAQAILTFKEVTSRYPKHAKSASALLKIGMS 257
Query: 237 YVALALMDEAREVVSLIQERYPQG 260
Y + D A + + E +P+
Sbjct: 258 YDRVGDPDNAVFYLRALVEDFPKS 281
Score = 42.9 bits (98), Expect = 0.049, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 27/84 (32%), Gaps = 2/84 (2%)
Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
A + G G++ A F L YS A+ E Y + +A
Sbjct: 172 MGAQATYDAGLAKYNGGDFEGARGAFDEFLKKYSSDGLTPNALYWKGETYYSQKDYAQAI 231
Query: 248 EVVSLIQERYPQGYWARYVETLVK 271
+ RYP A+ L+K
Sbjct: 232 LTFKEVTSRYP--KHAKSASALLK 253
>gi|189423651|ref|YP_001950828.1| hypothetical protein Glov_0581 [Geobacter lovleyi SZ]
gi|189419910|gb|ACD94308.1| conserved repeat domain protein [Geobacter lovleyi SZ]
Length = 880
Score = 45.2 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 16/74 (21%), Positives = 28/74 (37%)
Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
G ++ EY AA+ R VL Y + + + L A+ + +A ++
Sbjct: 40 GFNAYQQKEYPAAVARLGEVLKKYPETPLRDMTLFWLARAHYKVGNRSDAARYMAQFTRE 99
Query: 257 YPQGYWARYVETLV 270
YP VE +
Sbjct: 100 YPDNPLKNTVEDEL 113
>gi|71901733|ref|ZP_00683805.1| TPR repeat [Xylella fastidiosa Ann-1]
gi|71728505|gb|EAO30664.1| TPR repeat [Xylella fastidiosa Ann-1]
Length = 271
Score = 45.2 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 27/70 (38%), Gaps = 2/70 (2%)
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
K +Y A F L Y + + A+ L E+Y A+ A + RYP
Sbjct: 156 KNSKYADAAELFMSFLKLYPNGVYTPNALYWLGESYYAMHDFVSAEAQFRTLLSRYPTHD 215
Query: 262 WARYVETLVK 271
+ +L+K
Sbjct: 216 --KASGSLLK 223
>gi|298292992|ref|YP_003694931.1| tol-pal system protein YbgF [Starkeya novella DSM 506]
gi|296929503|gb|ADH90312.1| tol-pal system protein YbgF [Starkeya novella DSM 506]
Length = 321
Score = 45.2 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 19/98 (19%), Positives = 37/98 (37%), Gaps = 1/98 (1%)
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI-GRYYLKRGEYVAAIPRFQLVLANY 220
++ + +F ++ A G +R Y A F V +Y
Sbjct: 205 YGYMLRQDYAQSATSFEQFIKLYPNDRAAPDAYYWLGETQFQRKTYKEAAQNFLKVSTDY 264
Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
+A A +A+ RL ++ A+ D A ++ + +YP
Sbjct: 265 PNAVKAPDALLRLGQSLAAIGEKDAACATLNAVNNKYP 302
Score = 39.0 bits (88), Expect = 0.73, Method: Composition-based stats.
Identities = 13/66 (19%), Positives = 24/66 (36%)
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
++ Y+ R +Y + F+ + Y + A +A L E EA + +
Sbjct: 201 YDLAYGYMLRQDYAQSATSFEQFIKLYPNDRAAPDAYYWLGETQFQRKTYKEAAQNFLKV 260
Query: 254 QERYPQ 259
YP
Sbjct: 261 STDYPN 266
>gi|77360807|ref|YP_340382.1| prenylyltransferase domain-containing protein [Pseudoalteromonas
haloplanktis TAC125]
gi|76875718|emb|CAI86939.1| putative periplasmic protein contains a protein prenylyltransferase
domain [Pseudoalteromonas haloplanktis TAC125]
Length = 248
Score = 45.2 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 18/121 (14%), Positives = 43/121 (35%), Gaps = 14/121 (11%)
Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
+ + + Y NS Y A +++ G+ + A
Sbjct: 142 MKDKRYDQAIPEFQTFLTTYPNSVYASNAHYWL--------------GQLLTIKNNPAKA 187
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
F++V+ + ++ +AM +L L EA+++++ + +YP A+
Sbjct: 188 TEHFKVVVNEFPNSNKRPDAMLKLGTLLQEQNLAAEAQKILNDLINQYPSTTAAKLATKR 247
Query: 270 V 270
+
Sbjct: 248 L 248
>gi|258592799|emb|CBE69108.1| exported protein of unknown function [NC10 bacterium 'Dutch
sediment']
Length = 249
Score = 45.2 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 33/251 (13%), Positives = 65/251 (25%), Gaps = 15/251 (5%)
Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85
I + C L + + Y V L + +A F Q
Sbjct: 5 IVIVLLGCVLAACATEQ-------AAVKEEKADTHYNLGVARLASGDVKQAIAEFGQAIG 57
Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN-----VDYVYYLVGMS 140
D P V R +L ++ + + + + ++ ++ N
Sbjct: 58 DAPDNSVYRNALGLAYLMDRRLDQAVASFQRAVQLDPKFSDAYNNLGSAFVQQADYDQAV 117
Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
A + + + + + + A +G Y
Sbjct: 118 TAFRQALLNPAYLSPEQAHLNLGNVYMVQGRTADAVMEFKRALDILPDFAEAHNRLGYAY 177
Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
L +G+ AI L + + A L Y++ D AR+ + + P
Sbjct: 178 LVQGQLELAIAELTLAVKQAPE---LATAYQSLGFTYLSANEKDRARQAFQKVVDLSPTS 234
Query: 261 YWARYVETLVK 271
A K
Sbjct: 235 EMAAEAMRQFK 245
>gi|255689982|ref|ZP_05413657.1| TPR-domain containing protein [Bacteroides finegoldii DSM 17565]
gi|260624589|gb|EEX47460.1| TPR-domain containing protein [Bacteroides finegoldii DSM 17565]
Length = 1005
Score = 45.2 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 35/222 (15%), Positives = 70/222 (31%), Gaps = 22/222 (9%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
+ Y Y + +++S+A YF + R + + + +
Sbjct: 502 QPNNETYALANYNLGYIAFHRKDYSQASHYFQKYIRLEKG--------ENTTALADAYNR 553
Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
+ + + G + V Q+ + ++R+V +Y
Sbjct: 554 VGDCYLHVRNFEEAKHYYSQAEQMNTPSGDYSFYQLALVSGLQKDYSGKITLLNRLVGKY 613
Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
SPY E GR Y+ AI F+ ++ Y ++ + +A
Sbjct: 614 PASPY--------------AVNAIYEKGRSYVLMDNNNQAITSFKELMNKYPESPVSRKA 659
Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
A + Y ++A E + E+YP AR +K
Sbjct: 660 AAEIGLLYYQKDDYNQAIEAYKQVIEKYPGSEEARMAMRDLK 701
Score = 43.6 bits (100), Expect = 0.033, Method: Composition-based stats.
Identities = 31/262 (11%), Positives = 69/262 (26%), Gaps = 19/262 (7%)
Query: 19 LYK-FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
+ K I +I ++G+ + S + D+ +Y++ +E+N++ A
Sbjct: 1 MKKEITRLICAAICCTPIIGFAQTSDKFTSTDN---------LYKEGKELFQEKNYAAAL 51
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
+ P + + + M A Y + L + L
Sbjct: 52 PALKAFVKQKPATSLLQDAEYMLASSAYELKDKNRIEILRKYLDRYPDTPYANRIYALLA 111
Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSR-----IVERYTNSPYVKGARFYVTVGRNQLAAK 192
+ + D + + + + T R A
Sbjct: 112 SCYFYEGKYDEALALFNSADLGLLGNEERDDCTYQLATCYLKTNNLREAAIWFETLRANS 171
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANY----SDAEHAEEAMARLVEAYVALALMDEARE 248
R+ L + D+++ + E Y L D+A+
Sbjct: 172 PKYAKDCDYYLSYIRYTQKRYNEALKGFLPLQDDSKYKALVPYYIAEIYAQLQNYDKAQI 231
Query: 249 VVSLIQERYPQGYWARYVETLV 270
V YP + ++
Sbjct: 232 VAQNYLSAYPNNEHTAEMYRIL 253
Score = 35.5 bits (79), Expect = 8.1, Method: Composition-based stats.
Identities = 23/218 (10%), Positives = 63/218 (28%), Gaps = 22/218 (10%)
Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
S +++ ++ E +L+ ++ ++++A E + Q +P + AR ++
Sbjct: 639 AITSFKELMNKYPESPVSRKAAAEIGLLYYQKDDYNQAIEAYKQVIEKYPGSEEARMAMR 698
Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
+ + + A+L N + Y + +
Sbjct: 699 DLKSIYVDLNRIDEFAALANAMPGHIRFDANEQDSLTYTA-------AEKIYMRGRLEEA 751
Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
++ ++ + + + + I L
Sbjct: 752 KTSFNKYLQTFPEGAF---------------SLNAHYHLCLIGSEQKNYDMILLHSGKLL 796
Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
Y + AEEA+ E +A +++E+
Sbjct: 797 EYPNNPFAEEALILRAEVQFNQQQTADALTSYKMLKEK 834
Score = 35.2 bits (78), Expect = 9.4, Method: Composition-based stats.
Identities = 32/224 (14%), Positives = 71/224 (31%), Gaps = 16/224 (7%)
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
Y A ++ + QN+ KA +P + + Y G+Y QA EY
Sbjct: 214 YYIAEIYAQLQNYDKAQIVAQNYLSAYPNNEHTAEMYRILGDAYYHFGQYHQAVESFNEY 273
Query: 121 ITQYPESKNVDYVYY----LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
+ + + D +Y + T L + + + +
Sbjct: 274 LDKDHSAARRDALYMLGLSYYQTKVYSKAAETLGKVTTTNDALTQNAYLHMGLSYLQLAE 333
Query: 177 GARFYV----------TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
+ + + + AA + + + ++ F+ L + + +A
Sbjct: 334 KNKARMAFEQAAASNANMQIKEQAAYNYALCLHETSFSAFGESVTAFEKFLNEFPTSPYA 393
Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
E+ + LVE Y+ D A + + I + P + ++
Sbjct: 394 EKVSSYLVEVYMNTRSYDAALKSIDRIAK--PSAQILEAKQKIL 435
>gi|126340092|ref|XP_001366229.1| PREDICTED: similar to FKBP52; 52 kD FK506 binding protein
[Monodelphis domestica]
Length = 462
Score = 45.2 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 30/191 (15%), Positives = 62/191 (32%), Gaps = 3/191 (1%)
Query: 74 SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
KA + + + + + + + + + ES ++
Sbjct: 206 EKAIQRMEKGEKSIVYLKPSYGFGSSGKEKFQIPQDAELQYEVTLKSFEKAKESWEMNAE 265
Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
L + + V + + K L +IV + T R A
Sbjct: 266 EKLEQSAIVKERGTVYFKEGKYKQALLQYKKIVSWLEYEMGFSEEEGHRTQARALRLASH 325
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+ + +LK + AA+ L ++ E+ + R EAY+A+ + AR+ +
Sbjct: 326 LNLAMCHLKLHSFSAAVESCNKALELDNN---NEKGLFRRGEAYLAVNDFELARDDFQKV 382
Query: 254 QERYPQGYWAR 264
+ YP AR
Sbjct: 383 LKLYPSNKAAR 393
>gi|71892118|ref|YP_277850.1| putative periplasmic protein [Candidatus Blochmannia pennsylvanicus
str. BPEN]
gi|71796224|gb|AAZ40975.1| putative periplasmic protein [Candidatus Blochmannia pennsylvanicus
str. BPEN]
Length = 261
Score = 45.2 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 19/190 (10%), Positives = 52/190 (27%), Gaps = 14/190 (7%)
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
Q + + Y + K + + +
Sbjct: 82 MQHHISEIINNQSASPQHTNNISNKRNIHYSNNIPDKLSSHSNIQRPKKTNNAMIIDVDT 141
Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
+ + +++ ++ + + S Y + +++ K
Sbjct: 142 AYKQAVSLVLEKKQYNQAIEAFQNFIRNHPESIYQSNSHYWLGQLYYNKGNK-------- 193
Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
A F LV+ NY + A +A+ ++ D+A+ + + + YP
Sbjct: 194 ------HDAARHFALVVKNYPKSLKASDALLKIGIIMQETEQKDKAKTIYKKVGKLYPNS 247
Query: 261 YWARYVETLV 270
A+ + +
Sbjct: 248 NAAKQAQKRL 257
>gi|107100430|ref|ZP_01364348.1| hypothetical protein PaerPA_01001455 [Pseudomonas aeruginosa PACS2]
gi|296390667|ref|ZP_06880142.1| tol-pal system protein YbgF [Pseudomonas aeruginosa PAb1]
gi|313105861|ref|ZP_07792124.1| hypothetical protein PA39016_000110158 [Pseudomonas aeruginosa
39016]
gi|310878626|gb|EFQ37220.1| hypothetical protein PA39016_000110158 [Pseudomonas aeruginosa
39016]
Length = 213
Score = 45.2 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 21/121 (17%), Positives = 48/121 (39%), Gaps = 14/121 (11%)
Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
+ Q + + +Y NS Y A++++ G L +G+ A
Sbjct: 104 KSKDFDKASQAFNAFLRKYPNSQYSGNAQYWL--------------GEVNLAKGDLQGAG 149
Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
F V +Y ++ +++ +L + L D+A+ ++ + +YP A+ + +
Sbjct: 150 QAFARVSQSYPSSQKVPDSLYKLADVERRLGNNDKAKGILQQVISQYPGTSAAQLAQRDL 209
Query: 271 K 271
K
Sbjct: 210 K 210
Score = 39.4 bits (89), Expect = 0.61, Method: Composition-based stats.
Identities = 12/69 (17%), Positives = 27/69 (39%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ +K ++ A F L Y +++++ A L E +A + A + +
Sbjct: 95 YYDAAFDLIKSKDFDKASQAFNAFLRKYPNSQYSGNAQYWLGEVNLAKGDLQGAGQAFAR 154
Query: 253 IQERYPQGY 261
+ + YP
Sbjct: 155 VSQSYPSSQ 163
Score = 36.7 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 32/84 (38%)
Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
D ++ Y+ A +K ++F KA + FN R +P + + + V + G
Sbjct: 84 SEPGDPAKEKLYYDAAFDLIKSKDFDKASQAFNAFLRKYPNSQYSGNAQYWLGEVNLAKG 143
Query: 109 KYQQAASLGEEYITQYPESKNVDY 132
Q A YP S+ V
Sbjct: 144 DLQGAGQAFARVSQSYPSSQKVPD 167
>gi|313672749|ref|YP_004050860.1| tol-pal system protein ybgf [Calditerrivibrio nitroreducens DSM
19672]
gi|312939505|gb|ADR18697.1| tol-pal system protein YbgF [Calditerrivibrio nitroreducens DSM
19672]
Length = 254
Score = 45.2 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 29/77 (37%)
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+G YL A F+ V+ NY +AM +L L +EA +++ +
Sbjct: 170 YWMGESYLNLNNLEKAAESFRNVIENYPQENKVPDAMYKLGVTLDKLGKRNEAVDILKKL 229
Query: 254 QERYPQGYWARYVETLV 270
+ A ++ +
Sbjct: 230 ILNFKYSDIANTAKSKL 246
>gi|298372047|ref|ZP_06982037.1| TPR-domain containing protein [Bacteroidetes oral taxon 274 str.
F0058]
gi|298274951|gb|EFI16502.1| TPR-domain containing protein [Bacteroidetes oral taxon 274 str.
F0058]
Length = 999
Score = 45.2 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 22/234 (9%), Positives = 58/234 (24%), Gaps = 8/234 (3%)
Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
Y + ++E+ +Q + A + F R +
Sbjct: 8 QSYAQETQIRSNKNHLFEEGQSLFVQQKYGAARKAFEDYLSVADERAANRIDAMYYIACT 67
Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYV-----YYLVGMSYAQMIRDVPYDQRATKLML 159
A + + ++ +YP + + Q L
Sbjct: 68 AYELNDPNAEEILKNFVEKYPYYPMQNRISLNLGQMYFDKKQYQQAAMYLAQVDPYDLNE 127
Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219
+ R + ++ + I + ++ L
Sbjct: 128 KEAERYYFINGFCLLQEKNYQAAKQNFMRINYSKSYIDDKTYYTAYCDYCLHQYDSALEG 187
Query: 220 Y---SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
+ ++ E A+ ++ Y ++A ++ + RYP V ++
Sbjct: 188 FERCKGTKYEEVALYHTIQIYEQKGNRNKAIQMGKELIARYPSNPNNADVYRIL 241
Score = 40.9 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 33/204 (16%), Positives = 65/204 (31%), Gaps = 22/204 (10%)
Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
+ Y + ++ + A ++F+Q P + +
Sbjct: 495 KAFYTAGYSYFYQEQWDNARQWFSQYLAKEPDKKSNLYY--------DALNRIGDCYFYR 546
Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
++ V + Q+ + + R++++Y NS Y
Sbjct: 547 RDFRNAVDAYSKVSGSNSTDVDYALYQKAFIKGLQKKYGEEIADLQRLIKKYPNSVYAPK 606
Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
A++ EIGR Y+ + +Y AI + VL NY A +A+ Y
Sbjct: 607 AQY--------------EIGRAYVLQNKYSKAIEEYNTVLTNYPQTPIARKAILETGMLY 652
Query: 238 VALALMDEAREVVSLIQERYPQGY 261
+ D+A + E+YP
Sbjct: 653 ENMGQTDKAIAAYKNVVEKYPGSE 676
>gi|39997085|ref|NP_953036.1| TPR domain protein [Geobacter sulfurreducens PCA]
gi|39983975|gb|AAR35363.1| TPR domain protein [Geobacter sulfurreducens PCA]
Length = 864
Score = 45.2 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 18/212 (8%), Positives = 50/212 (23%), Gaps = 4/212 (1%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
D +Q Y+ A + + +A + + + + P + L +
Sbjct: 21 EKDQNFQDARYQLAKAYQALGKYEQAEKEYLKVLKQNP-SKTDIVLELAKLYNSQRKPDQ 79
Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSY---AQMIRDVPYDQRATKLMLQYMSRIVE 167
+ A+ + ++ + + ++
Sbjct: 80 AVEQAGKYLQSNPGSAEALEVLGLGYALKGMPAEAERNFLLALEKEPRRTSAKLQLAVLL 139
Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
S K AR + ++ +
Sbjct: 140 MEQKSSREKEARALIDEILTADPGNVKAHNLLASYELSLGNREQALEIYRKVAALTPGDP 199
Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
+ R + MD+A + + +++PQ
Sbjct: 200 APLYRQGVILLEKGEMDKAEKTAETLVQKFPQ 231
>gi|310639644|ref|YP_003944402.1| tetratricopeptide tpr_2 repeat protein [Paenibacillus polymyxa SC2]
gi|309244594|gb|ADO54161.1| Tetratricopeptide TPR_2 repeat protein [Paenibacillus polymyxa SC2]
Length = 589
Score = 45.2 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 30/200 (15%), Positives = 55/200 (27%), Gaps = 3/200 (1%)
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
+EKAV L ++ KA +YF + P V ++ + S
Sbjct: 26 FEKAVRSLDRNHYDKALKYFRKAVEYEPDNPVNHCNMAGILSEMGDYAGSNEILSSVLSD 85
Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
+ M + Q++ E Y
Sbjct: 86 VDSSMTECYFYMANNYANMEQFEEAEKALVTYLEEDEEGQFLDEAEEMMELLYYELDRPT 145
Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
+ + + E + R L+ G++ A + + D A L AY +
Sbjct: 146 KLNRIKARQGVVEHDQARVLLEEGKFAQAAQLLKQISEEQPDMFA---ARNNLALAYYYM 202
Query: 241 ALMDEAREVVSLIQERYPQG 260
L A+ + + E P
Sbjct: 203 GLFQNAKATIIQVLEDEPGN 222
>gi|308067000|ref|YP_003868605.1| hypothetical protein [Paenibacillus polymyxa E681]
gi|305856279|gb|ADM68067.1| TPR repeat protein [Paenibacillus polymyxa E681]
Length = 589
Score = 45.2 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 30/200 (15%), Positives = 55/200 (27%), Gaps = 3/200 (1%)
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
+EKAV L ++ KA +YF + P V ++ + S
Sbjct: 26 FEKAVRSLDRNHYDKALKYFRKAVEYEPDNPVNHCNMAGILSEMGDYAGSNEILSSVLSD 85
Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
+ M + Q++ E Y
Sbjct: 86 VDSSMTECYFYMANNYANMEQFEEAEKALVTYLEEDEEGQFLDEAEEMMELLYYELDRPT 145
Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
+ + + E + R L+ G++ A + + D A L AY +
Sbjct: 146 KLNRIKARQGVVEHDQARVLLEEGKFAQAAQLLKQISEEQPDMFA---ARNNLALAYYYM 202
Query: 241 ALMDEAREVVSLIQERYPQG 260
L A+ + + E P
Sbjct: 203 GLFQNAKATIIQVLEDEPGN 222
>gi|256828286|ref|YP_003157014.1| tol-pal system protein YbgF [Desulfomicrobium baculatum DSM 4028]
gi|256577462|gb|ACU88598.1| tol-pal system protein YbgF [Desulfomicrobium baculatum DSM 4028]
Length = 350
Score = 45.2 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 34/86 (39%), Gaps = 1/86 (1%)
Query: 180 FYVTVGRNQLAAKEVEIG-RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
F R++L + + Y A+ F V+ ++ + +A+ +L + +
Sbjct: 242 FMRNFPRHRLLPNALYWTGETWYAEARYDRAMKYFTQVVQDHPRHGKSADALLKLAYSAL 301
Query: 239 ALALMDEAREVVSLIQERYPQGYWAR 264
++A + ++ RYP +R
Sbjct: 302 RQGQHEQAGVYLQQLEVRYPDSPASR 327
>gi|206602339|gb|EDZ38820.1| putative TPR domain-containing protein [Leptospirillum sp. Group II
'5-way CG']
Length = 274
Score = 45.2 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 35/259 (13%), Positives = 69/259 (26%), Gaps = 21/259 (8%)
Query: 19 LY--KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE-------------- 62
++ K +L + FL+G + V Q + +
Sbjct: 1 MFQGKTSLGFVAGLFSLFLMGCASTMDMEDLQARVDANTAQIKQLKHQGGSGTVSQDSVR 60
Query: 63 --KAVLFLKEQNFSKA-YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
L +Q A + + + S ++
Sbjct: 61 LADIENRLDQQKARLANLRGRLDVIDHRLDTLMEKIDEQNARIKSMSQAAPLSSSPNSMA 120
Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
T P + + V G S + P + + + + + +
Sbjct: 121 KTTTPPITTAIAPVAPPQGTSGSAASVPPPSADILYRQAMNDYQTGHYQLSKKEFGQVVS 180
Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
Y A E +G+ Y A+ F V+ NY D+ A +L +Y +
Sbjct: 181 LYPQSHLASSA--EFWVGQSEFNMKHYDKAVSSFLQVIKNYPDSPKRAVAYFKLGRSYES 238
Query: 240 LALMDEAREVVSLIQERYP 258
L +A + E +P
Sbjct: 239 LGKKKDAIHSYRRVLELFP 257
>gi|108758700|ref|YP_628650.1| putative lipoprotein [Myxococcus xanthus DK 1622]
gi|108462580|gb|ABF87765.1| putative lipoprotein [Myxococcus xanthus DK 1622]
Length = 301
Score = 45.2 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 13/81 (16%), Positives = 32/81 (39%), Gaps = 1/81 (1%)
Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL-ALMDE 245
Q A + + Y + G+Y + V+ + + + ++A+ +A + E
Sbjct: 136 PQGAELHYLVTKLYFELGDYQQCELETRRVMERFPTSAYVDDALYLQAQAIAMMEGRRQE 195
Query: 246 AREVVSLIQERYPQGYWARYV 266
A + ++ R+P A +
Sbjct: 196 ASRTFADLRTRFPDSELAPHA 216
>gi|288574089|ref|ZP_06392446.1| Lytic transglycosylase catalytic [Dethiosulfovibrio peptidovorans
DSM 11002]
gi|288569830|gb|EFC91387.1| Lytic transglycosylase catalytic [Dethiosulfovibrio peptidovorans
DSM 11002]
Length = 648
Score = 45.2 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 28/208 (13%), Positives = 61/208 (29%), Gaps = 7/208 (3%)
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
Y ++ +A +Y Q F+ A M+ + G+ S
Sbjct: 202 YRLGYAAYLREDHDEAVKYLAQVPLSGSFSQSALYYRSMALYRLKRYGEALPLLSRLIFM 261
Query: 121 ITQYP---ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV-- 175
S+ + + M A+ I + + L V +
Sbjct: 262 EDNDYVVRGSRRIALIAKRGYMEEAEKILFRASRELSGDRALSAAVSYVGILSGEAKTDE 321
Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
+ + ++ ++ + +G+Y A+ F+ ++ A E +
Sbjct: 322 EDRILKLYPRSSEASSILWDRAWVRWDKGDYEGALSFFEKASSSKGMAPA--EHLYWKGR 379
Query: 236 AYVALALMDEAREVVSLIQERYPQGYWA 263
L DEA + + E YP ++
Sbjct: 380 CLERLNRPDEAVKSFKALSENYPLSIYS 407
>gi|34556945|ref|NP_906760.1| hypothetical protein WS0523 [Wolinella succinogenes DSM 1740]
gi|34482660|emb|CAE09660.1| conserved hypothetical protein [Wolinella succinogenes]
Length = 319
Score = 45.2 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 12/91 (13%), Positives = 33/91 (36%)
Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
+ + + A+ +G + Y AI ++ Y A++ + +++
Sbjct: 227 EWTAKNQYKPASSNYLLGEIAFREKRYKDAIYYYKESATMYDKADYMPRLLLNSAKSFTQ 286
Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETLV 270
+ ++ + I YP A+ + L+
Sbjct: 287 TGDKENSKRFLESIVSLYPDSSEAKEAKKLL 317
>gi|296448864|ref|ZP_06890696.1| tol-pal system protein YbgF [Methylosinus trichosporium OB3b]
gi|296253630|gb|EFH00825.1| tol-pal system protein YbgF [Methylosinus trichosporium OB3b]
Length = 197
Score = 45.2 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 15/65 (23%), Positives = 29/65 (44%)
Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
+G + R + A +F + + + A EAM RL ++ A+ ++A + I
Sbjct: 115 YLGESFFLRERHREAAEKFLEISTKFPSSPQAPEAMLRLGQSLHAIGAKEQACASFNEIA 174
Query: 255 ERYPQ 259
+YP
Sbjct: 175 VKYPG 179
>gi|91781921|ref|YP_557127.1| putative transmembrane protein [Burkholderia xenovorans LB400]
gi|91685875|gb|ABE29075.1| Putative transmembrane protein [Burkholderia xenovorans LB400]
Length = 249
Score = 45.2 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 21/123 (17%), Positives = 42/123 (34%), Gaps = 14/123 (11%)
Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
+ K + R+ NSPY A++++ G +Y
Sbjct: 137 QQFRNGDFKNAAASFRTFISRFPNSPYQPTAQYWL--------------GNALYALRDYK 182
Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
+ +Q V+ NY A EA+ + + AR+ + I +Y A+ +
Sbjct: 183 GSTAIWQGVVKNYPQHPRAPEALLAIANNQLEQGQKAAARKTLEQIVAQYSGSDVAQSAQ 242
Query: 268 TLV 270
+ +
Sbjct: 243 SKL 245
Score = 40.5 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 16/112 (14%), Positives = 34/112 (30%)
Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
K Y + + R + V + + G++ A F+
Sbjct: 93 QKQQKDYYTDLDTRLKKFEPQQQTVDGVQGEVQPGETESFNAASQQFRNGDFKNAAASFR 152
Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
++ + ++ + A L A AL + + + + YPQ A
Sbjct: 153 TFISRFPNSPYQPTAQYWLGNALYALRDYKGSTAIWQGVVKNYPQHPRAPEA 204
>gi|78485245|ref|YP_391170.1| TPR repeat-containing protein [Thiomicrospira crunogena XCL-2]
gi|78363531|gb|ABB41496.1| Tol system YbgF protein [Thiomicrospira crunogena XCL-2]
Length = 269
Score = 45.2 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 17/87 (19%), Positives = 29/87 (33%)
Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243
+ + G G AA+ F V Y + A AM R + Y L
Sbjct: 177 PHSDLASNSAYWEGEAEAVLGNDKAALKAFVDVYETYPTSLKAPAAMLRAADMYDDLGDK 236
Query: 244 DEAREVVSLIQERYPQGYWARYVETLV 270
+A+ + + + YP+ A +
Sbjct: 237 KKAKTLYEKLIQDYPKKNVAEKARKRL 263
>gi|91792754|ref|YP_562405.1| tetratricopeptide TPR_2 [Shewanella denitrificans OS217]
gi|91714756|gb|ABE54682.1| Tetratricopeptide TPR_2 [Shewanella denitrificans OS217]
Length = 261
Score = 45.2 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
K +Y AAIP F+ + Y D+ +A A L + + + A++ S + +Y
Sbjct: 151 KERQYDAAIPAFREFIKQYPDSAYAPNANYWLGQLLYNKSDYESAKQAFSTVVSKYADS- 209
Query: 262 WARYVETLVK 271
++ ++LVK
Sbjct: 210 -SKRADSLVK 218
>gi|258593153|emb|CBE69465.1| protein of unknown function [NC10 bacterium 'Dutch sediment']
Length = 739
Score = 45.2 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 10/82 (12%), Positives = 28/82 (34%)
Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
A IGR Y + + A+ + ++ Y ++ E++ + ++
Sbjct: 292 MGQDRSLYSAEALYWIGRSYARVDDREQAVMAWTRLIDIYPNSPFTAESLYLMALQHIDN 351
Query: 241 ALMDEAREVVSLIQERYPQGYW 262
+ A + + + Y +
Sbjct: 352 SQPKRAIQTLDRLIRNYQSSRF 373
Score = 42.1 bits (96), Expect = 0.093, Method: Composition-based stats.
Identities = 20/241 (8%), Positives = 48/241 (19%), Gaps = 29/241 (12%)
Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
E +E+A+ + +S A F +
Sbjct: 222 TADEQFERALSLYRSSQYSLAITAFAPFLD--EGSRPFDGGQDRFTSRARLWSGISHFQR 279
Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY- 174
D Y Y + + +R+++ Y NSP+
Sbjct: 280 RDYRLAISLLSPMGQDRSLYSAEALYWIGRSY--ARVDDREQAVMAWTRLIDIYPNSPFT 337
Query: 175 ----------VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL------- 217
+ ++ + A ++
Sbjct: 338 AESLYLMALQHIDNSQPKRAIQTLDRLIRNYQSSRFIDAALWARAWIHYRQSALKRALAD 397
Query: 218 ------ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA-RYVETLV 270
SD + + + L +A E + + + +
Sbjct: 398 LQRLQARGASDPRFQVQVLYWQGRVFEGLKKRKKATETYRRLLSIHSDDDYYAEQTYRRL 457
Query: 271 K 271
+
Sbjct: 458 R 458
Score = 41.3 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 23/232 (9%), Positives = 64/232 (27%), Gaps = 13/232 (5%)
Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
+ + +R E+A L+L ++A E + R++LL A +
Sbjct: 116 EHPDSLLTERARQERARLYLGANQLTQAEEAYRDYLARASNEARRREALLALAEIALKLV 175
Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
+ + + +++ + + R +
Sbjct: 176 PDPDRGADKRREADALLRELWLKHPGTWEAARAGELLASMAEAPPF--TADEQFERALSL 233
Query: 169 YTNSPYV----------KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
Y +S Y G+++ ++ +
Sbjct: 234 YRSSQYSLAITAFAPFLDEGSRPFDGGQDRFTSRARLWSGISHFQRRDYRLAISLL-SPM 292
Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
+ ++ EA+ + +Y + ++A + + + YP + L+
Sbjct: 293 GQDRSLYSAEALYWIGRSYARVDDREQAVMAWTRLIDIYPNSPFTAESLYLM 344
Score = 37.5 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 9/40 (22%), Positives = 14/40 (35%)
Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
A+ AY L L +A V+S + +P
Sbjct: 89 ALHYAASAYQTLGLNAQALAVLSRLLHEHPDSLLTERARQ 128
>gi|237739094|ref|ZP_04569575.1| conserved hypothetical protein [Fusobacterium sp. 2_1_31]
gi|229423694|gb|EEO38741.1| conserved hypothetical protein [Fusobacterium sp. 2_1_31]
Length = 446
Score = 45.2 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 10/43 (23%), Positives = 19/43 (44%)
Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
E + +Y L E + + L+++ +P WA+ E L
Sbjct: 399 PEIYYNIASSYAKLGNRVEVTKYIRLLKQEFPNSSWAKKSEAL 441
>gi|323343854|ref|ZP_08084081.1| hypothetical protein HMPREF0663_10616 [Prevotella oralis ATCC
33269]
gi|323095673|gb|EFZ38247.1| hypothetical protein HMPREF0663_10616 [Prevotella oralis ATCC
33269]
Length = 475
Score = 45.2 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 23/229 (10%), Positives = 67/229 (29%), Gaps = 14/229 (6%)
Query: 28 FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87
F A+ L+ + + R+ + AV+++ +++ A + +
Sbjct: 5 FYFALSILLLCSGCTLFGNRSSAEDAETMARKYLDSAVIYIDRKDYHPAMLQLKEAEKLL 64
Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147
P + + ++ + ++ Y
Sbjct: 65 PQLNDTKTCYRICQYIGWINENNGAGELALHYQRLALKYARAYGKPEY------------ 112
Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
+ ++ + A+FY ++Q + + I Y +
Sbjct: 113 --VVDVLINQANTFFDMNLQDSALKANNEAAKFYKQSDKSQQSVIQKNIAYYDMLHDSLG 170
Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
A + D+ AM+ L + Y+ ++A+ ++S++ +
Sbjct: 171 QAEQHAYRAVMLAQDSSAIGNAMSLLCQIYLRQNKDEKAQMLMSIMPQN 219
>gi|307610773|emb|CBX00385.1| hypothetical protein LPW_21061 [Legionella pneumophila 130b]
Length = 326
Score = 44.8 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 22/105 (20%), Positives = 41/105 (39%)
Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
+RY + A E +G YL + +Y AI F++VL Y + A
Sbjct: 217 KRYDEAIKSMQTFVQKYPRGGYTANAEYWLGELYLVKKDYPKAIEHFEIVLQQYPSSSKA 276
Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
++ + AY EA++ + + YP A+ + ++
Sbjct: 277 AASLLKSGYAYAEKGDTQEAKKRFQQVVKTYPDTPTAQLASSKLE 321
Score = 39.0 bits (88), Expect = 0.80, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 29/75 (38%), Gaps = 2/75 (2%)
Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
+K Y AI Q + Y + A L E Y+ +A E ++ ++
Sbjct: 210 AYELVKNKRYDEAIKSMQTFVQKYPRGGYTANAEYWLGELYLVKKDYPKAIEHFEIVLQQ 269
Query: 257 YPQGYWARYVETLVK 271
YP ++ +L+K
Sbjct: 270 YPSS--SKAAASLLK 282
>gi|289807701|ref|ZP_06538330.1| outer membrane protein assembly complex subunit YfiO [Salmonella
enterica subsp. enterica serovar Typhi str. AG3]
Length = 98
Score = 44.8 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 14/103 (13%), Positives = 32/103 (31%), Gaps = 7/103 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + + + FL G E+Y A L++ N+ +A
Sbjct: 1 MTRMKYLVAAATLSLFLAGCSGSKEE-------VPDNPPNEIYATAQQKLQDGNWKQAIT 53
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
+PF +++ L + Y ++ +A +
Sbjct: 54 QLEALDNRYPFGPYSQQVQLDLIYAYYKKRRFAASAGRHRSFY 96
>gi|225849452|ref|YP_002729617.1| hypothetical protein SULAZ_1659 [Sulfurihydrogenibium azorense
Az-Fu1]
gi|225643936|gb|ACN98986.1| TPR repeat protein [Sulfurihydrogenibium azorense Az-Fu1]
Length = 236
Score = 44.8 bits (103), Expect = 0.012, Method: Composition-based stats.
Identities = 26/253 (10%), Positives = 74/253 (29%), Gaps = 20/253 (7%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ KF L F+++ L + + +R + LK+Q S E
Sbjct: 1 MKKFYL---FALSALVLSSCTSEDKIVSLQREILSIRQD-------LNELKDQTRSN-TE 49
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+ ++ ++ + + Q + + + V
Sbjct: 50 AITNLTSRVDRLSQTVSQNTTDIEKLKASRTTEEKPQVKQPPPPQEVKREGKEEVTVPQN 109
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
Y + + + +++Y +S A F+ + I
Sbjct: 110 DKQLYQYALDLYFKGNIEESRKAFVEFLKKYPDSDLYGNAIFWAGQTFYAEKKYKDAIDV 169
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
+ L + +AM ++ +Y+ + +++ ++ + + ++YP
Sbjct: 170 FNLLIQKCDEGKI---------KRCVKYPDAMLKIGYSYIEMGDVEKGKKYLQDLIQKYP 220
Query: 259 QGYWARYVETLVK 271
A + ++
Sbjct: 221 DTEPASLAKKKLE 233
>gi|302343326|ref|YP_003807855.1| hypothetical protein Deba_1896 [Desulfarculus baarsii DSM 2075]
gi|301639939|gb|ADK85261.1| Tetratricopeptide TPR_2 repeat protein [Desulfarculus baarsii DSM
2075]
Length = 583
Score = 44.8 bits (103), Expect = 0.012, Method: Composition-based stats.
Identities = 28/249 (11%), Positives = 66/249 (26%), Gaps = 11/249 (4%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSR--DVYLDSVTDVRYQR-EVYEKAVLFLKEQNFSK 75
+K A ++ + G + + +D+ +Y A + L+ + +K
Sbjct: 6 FFKRAAALWGLALMLLTAGCATVTPQAPPAKVDAPVSSLTDSLALYGAAQMALENGDTNK 65
Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK---NVDY 132
A E Q + P + + + ++ A E + + Y
Sbjct: 66 ALELLRQGIKIDPKSAFLHIEVSRILLGVGRTDEAEKEARQAIELNPELVDGWLLLGGIY 125
Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
+ + + Y+ + + R +LA
Sbjct: 126 SSRQDLNNAVKAFERATTLDPDQEEARLYLGTLYMDQGRMEQAVQVLRDLVKLRPRLALA 185
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR-EVVS 251
+G+ Y A + + L + E + L Y +A +
Sbjct: 186 RYYLGQALASLRRYRQAEVQLKAALLIAPNFEAV---LFELGAVYEMQHKYRDAEATYLR 242
Query: 252 LIQERYPQG 260
++ P
Sbjct: 243 VLDLN-PDS 250
>gi|254415937|ref|ZP_05029694.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
PCC 7420]
gi|196177364|gb|EDX72371.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
PCC 7420]
Length = 268
Score = 44.8 bits (103), Expect = 0.012, Method: Composition-based stats.
Identities = 27/235 (11%), Positives = 56/235 (23%), Gaps = 10/235 (4%)
Query: 19 LYKFALTIFFSIAVCFLVGWE----RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFS 74
+ + + L G+ Q V ++ ++ E+Y + V L++ +++
Sbjct: 1 MNSTYRILTILGLMTVLTGFSEAVHAQQPIRVVQEAPSEELTAVELYNQGVDKLEKGDYA 60
Query: 75 KAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
A F + + R S +A A +Q ++
Sbjct: 61 GAISDFGDALKLEPEDADTYYNRGYAYHSLGNYDAAIYDYTQAIKLNPDFSQAYSNRGYT 120
Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
Y + NS + A
Sbjct: 121 YFVRRDYQKAIADFTKAIEIDPENDTAYISRGNAYDELGNSEEALNDYAKALEINPENAR 180
Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
G + +Y AI + + EA L ++ A
Sbjct: 181 LYYNRGLTRNRLEQYEDAIADYTKSIELQPTF---AEAYYNRGLTQFQLENIEAA 232
>gi|332286924|ref|YP_004418835.1| exported protein [Pusillimonas sp. T7-7]
gi|330430877|gb|AEC22211.1| exported protein [Pusillimonas sp. T7-7]
Length = 227
Score = 44.8 bits (103), Expect = 0.012, Method: Composition-based stats.
Identities = 25/213 (11%), Positives = 52/213 (24%), Gaps = 21/213 (9%)
Query: 66 LFLKEQNFSKAYEYFNQ-CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY 124
+ +A + R AR + + +
Sbjct: 27 QAFSDDEARRAILELREQVKRYEDQNRQARLQFADQIQSMQNEMARMRGQLEQLNWQADL 86
Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYDQR------ATKLMLQYMSRIVERYTNSPYVKGA 178
+ + D + K ++ Y NS A
Sbjct: 87 QQRASQDQTGGNTPQVADPQEQAAYEGPMGLFRSGKYKEAAASFDDFLQAYPNSQLAPEA 146
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
RF G ++ +I Q ++ A +A+ + + +
Sbjct: 147 RF--------------YQGSSRYASKDFKGSIQGLQAMIEASPQDPRAPDALLVIAASQI 192
Query: 239 ALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
L M A+ + I + YP A ++ +K
Sbjct: 193 ELGNMAGAKSSLQKIVKDYPNTSAAETAKSRLK 225
>gi|16332023|ref|NP_442751.1| soluble lytic transglycosylase [Synechocystis sp. PCC 6803]
gi|1001335|dbj|BAA10822.1| soluble lytic transglycosylase [Synechocystis sp. PCC 6803]
Length = 847
Score = 44.8 bits (103), Expect = 0.012, Method: Composition-based stats.
Identities = 17/164 (10%), Positives = 37/164 (22%), Gaps = 1/164 (0%)
Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
+ ++D Y+ ++ +
Sbjct: 263 WQDILDQYPDSPVVVNALENLGSLDETYWQQAIADHPGHPRTLAILHQQLESEPNALE-I 321
Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
+R + R + + + G+ + +A Y A
Sbjct: 322 QRQILQNHPTDGRTAAVINSLTANRQGELTPEDWQAMGDNFWHRRIYNQAIAPYEKAPSN 381
Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
+ RL A L +EA+E + YP +
Sbjct: 382 ARNLYRLARAQQISKLDNEAKENYRQLIATYPDSEETALALRRL 425
Score = 41.7 bits (95), Expect = 0.10, Method: Composition-based stats.
Identities = 19/218 (8%), Positives = 62/218 (28%), Gaps = 1/218 (0%)
Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
+ F + +++A + + + ++ +S + Y+Q
Sbjct: 349 ELTPEDWQAMGDNFWHRRIYNQAIAPYEKAPSNARNLYRLARAQQISKLDNEAKENYRQL 408
Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
+ + + + + + + + + + + + N
Sbjct: 409 IATYPDSEETALALRRLAELVPPREGVQYLQQLEQQFPDQGASALAARIDLLAKFDANQA 468
Query: 174 YVKGARFYVTVGRNQLA-AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232
+ A + + K G Y A + + ++ +A+
Sbjct: 469 QQARQALLQKYPNSDAAADYRWRQAQEFAKAGNYTEAWRWAKEIANQNPQSDVTPKAIFW 528
Query: 233 LVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
+ + L +++ + +YPQ Y+A L+
Sbjct: 529 IGKWAQQLGRSADSKAAFETVLAKYPQSYYAWRSAVLL 566
Score = 36.3 bits (81), Expect = 4.7, Method: Composition-based stats.
Identities = 21/214 (9%), Positives = 55/214 (25%), Gaps = 13/214 (6%)
Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL---------LMSAFVQY 105
+ + + +A + +P + V +L +
Sbjct: 238 LAPYILLMRGRGYQLSNENDQAEATWQDILDQYPDSPVVVNALENLGSLDETYWQQAIAD 297
Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
G + A L ++ ++ + + + +
Sbjct: 298 HPGHPRTLAILHQQLESEPNALEIQRQILQNHPTDGRTAAVINSLTANRQGELTPEDWQA 357
Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
+ + A + R A ++ ++A Y D+E
Sbjct: 358 MGDNFWHRRIYNQAIAPYEKAPSNARNLYRLARAQQISKLDNEAKENYRQLIATYPDSEE 417
Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
A+ RL E L E + + +++++P
Sbjct: 418 TALALRRLAE----LVPPREGVQYLQQLEQQFPD 447
>gi|294056495|ref|YP_003550153.1| hypothetical protein Caka_2970 [Coraliomargarita akajimensis DSM
45221]
gi|293615828|gb|ADE55983.1| hypothetical protein Caka_2970 [Coraliomargarita akajimensis DSM
45221]
Length = 387
Score = 44.8 bits (103), Expect = 0.012, Method: Composition-based stats.
Identities = 23/213 (10%), Positives = 64/213 (30%), Gaps = 1/213 (0%)
Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
E Y++A + +K +++ + + + + + S A
Sbjct: 159 EEYDEAYDLFTRIDLAKVDPKYSEIAVKLSKIFIGLEDFQKVSKLAQSMPVDDVYAVNIR 218
Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
+ + ++ M + + ++ ++ L Y + +R + +
Sbjct: 219 PVLDAADALRGAGEYDAVIPMYKSILSAVPADLKKNVEMWLAYSLVLADRLDEAAPLIDG 278
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA-EHAEEAMARLVEAY 237
G + ++ G + +Y A+ + E + + + Y
Sbjct: 279 MQEPAPGEELFSLYKLLEGSRAYREKKYSNALDILTRGFVRAQTSYSWVPETLYLIGDCY 338
Query: 238 VALALMDEAREVVSLIQERYPQGYWARYVETLV 270
A+ V + I YP+ WA + +
Sbjct: 339 AYQGDKLAAKNVWTEITILYPRSPWAERAKQSL 371
>gi|114800143|ref|YP_758890.1| hypothetical protein HNE_0156 [Hyphomonas neptunium ATCC 15444]
gi|114740317|gb|ABI78442.1| conserved hypothetical protein [Hyphomonas neptunium ATCC 15444]
Length = 318
Score = 44.8 bits (103), Expect = 0.012, Method: Composition-based stats.
Identities = 14/74 (18%), Positives = 32/74 (43%)
Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
Q +G ++ Y + + ++ ++ D E A +A+ARL + + +
Sbjct: 225 DPQAGEAYFWLGETLHQQNAYAESGQAYTTMIRSFPDDERAPDALARLARSMRLIGDTAK 284
Query: 246 AREVVSLIQERYPQ 259
A + + + +RYP
Sbjct: 285 ACQALDTLPKRYPN 298
Score = 36.3 bits (81), Expect = 4.9, Method: Composition-based stats.
Identities = 15/82 (18%), Positives = 26/82 (31%)
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
A + R L +Y A FQ + + + A EA L E E+ +
Sbjct: 191 EAGPLFAVARQRLLALDYAGAQEAFQSFVDQFGNDPQAGEAYFWLGETLHQQNAYAESGQ 250
Query: 249 VVSLIQERYPQGYWARYVETLV 270
+ + +P A +
Sbjct: 251 AYTTMIRSFPDDERAPDALARL 272
>gi|56460186|ref|YP_155467.1| TPR repeat-containing protein [Idiomarina loihiensis L2TR]
gi|56179196|gb|AAV81918.1| Uncharacterized conserved protein, contains TPR repeats [Idiomarina
loihiensis L2TR]
Length = 253
Score = 44.8 bits (103), Expect = 0.012, Method: Composition-based stats.
Identities = 22/184 (11%), Positives = 61/184 (33%), Gaps = 14/184 (7%)
Query: 87 FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146
+ ++ + ++ S + + A + ++ N Y L
Sbjct: 82 QRQRELYQEIDRRFSNLKSSNNQSETAGNDYNSLEQVPTQTDNSSYSPNLSENDAYDKAI 141
Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
+ + + + ++ + NS Y A +++ G+ + + +Y
Sbjct: 142 ALVLEDKRYDEAIPAFESFLKNFPNSTYSPNAHYWL--------------GQLFFAKRQY 187
Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
A +F+ V+ +Y D+ + + +L +A+ + E YP+ A
Sbjct: 188 DQAKQQFETVVNDYPDSNKRGDCLLKLGAIASEQDKSADAKAYYQQVIEEYPESTEANLA 247
Query: 267 ETLV 270
+ +
Sbjct: 248 KQRL 251
>gi|298529331|ref|ZP_07016734.1| Tetratricopeptide TPR_2 repeat protein [Desulfonatronospira
thiodismutans ASO3-1]
gi|298510767|gb|EFI34670.1| Tetratricopeptide TPR_2 repeat protein [Desulfonatronospira
thiodismutans ASO3-1]
Length = 874
Score = 44.8 bits (103), Expect = 0.013, Method: Composition-based stats.
Identities = 24/221 (10%), Positives = 66/221 (29%), Gaps = 14/221 (6%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
Y + + + +A + F + +++P + + + + V
Sbjct: 353 PEHEAVPATHYYMGEHYKDRERYEEAADEFEEVVQEYPQDDLVKPAAVALTRVLNELNLD 412
Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM-------- 162
+QA + E ++P D + ++ + D + + +
Sbjct: 413 EQAGDMLEYIDNRWPRYHLDDPDFLVLAGNILYRNEDYQDAREKFMHYINLLPDGDQVDV 472
Query: 163 ------SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
+ ++ + + ++ E + ++ +
Sbjct: 473 SMARVGDILYQQGHEDSAREMYEQTARQYSDDEGGLIAQMRLADRFGDETIRPRLLYERI 532
Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
+ D+ A A+ RL + + L DEA + V +RY
Sbjct: 533 SEEFPDSPLAPVALLRLADWNLDNGLYDEAMDNVEDFYDRY 573
Score = 39.8 bits (90), Expect = 0.38, Method: Composition-based stats.
Identities = 10/70 (14%), Positives = 29/70 (41%)
Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
+ + G + + F+ ++ ++ EA+ + ++ + EAR
Sbjct: 287 QANFQEHSHDIPGNFQDVLRPFERAVSANPGSDRLPEALLNMGYIHLQVGNEPEARGYFD 346
Query: 252 LIQERYPQGY 261
L+++R+P+
Sbjct: 347 LLRDRFPEHE 356
Score = 39.8 bits (90), Expect = 0.43, Method: Composition-based stats.
Identities = 27/222 (12%), Positives = 63/222 (28%), Gaps = 20/222 (9%)
Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
++ E+ + + ++ A + F + D P ++ ++
Sbjct: 228 ELQEEPPPAEMDRYEEMIAAGQMAMSGAEYAIAADIFEELKND-PQLPEEHTEEVLYSYA 286
Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
Q + ++ + + + E + + Y
Sbjct: 287 QANFQEHSHDIPGNFQDVLRPFERAVSANPGSDRLPEALLNMGYIHLQVGNEPEARGYFD 346
Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
+ +R+ V + +G +Y R Y A F+ V+ Y
Sbjct: 347 LLRDRFPEHEAVPATHY--------------YMGEHYKDRERYEEAADEFEEVVQEYPQD 392
Query: 224 EHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
+ + A L L L ++A +++ Y W RY
Sbjct: 393 DLVKPAAVALTRVLNELNLDEQAGDMLE-----YIDNRWPRY 429
Score = 36.7 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 17/107 (15%), Positives = 36/107 (33%)
Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219
++ I + + G ++L + +G +L+ G A F L+
Sbjct: 292 EHSHDIPGNFQDVLRPFERAVSANPGSDRLPEALLNMGYIHLQVGNEPEARGYFDLLRDR 351
Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
+ + E + E Y +EA + + + YPQ +
Sbjct: 352 FPEHEAVPATHYYMGEHYKDRERYEEAADEFEEVVQEYPQDDLVKPA 398
>gi|220903293|ref|YP_002478605.1| putative lipoprotein [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219867592|gb|ACL47927.1| putative lipoprotein [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 304
Score = 44.8 bits (103), Expect = 0.013, Method: Composition-based stats.
Identities = 30/247 (12%), Positives = 66/247 (26%), Gaps = 15/247 (6%)
Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQ-------------REVYEKAVLFLKEQN 72
+ ++A CF +G + + D ++ R +A +
Sbjct: 43 LALAVAFCFCLGLAGCDNPVLQGDDLSQAREAVAQRQWSLAERLLERYLREAQDSQNADD 102
Query: 73 FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132
+A++ A L + +Y + A L ++
Sbjct: 103 RWEAWQQLLLVVNAAGQEPRASLEYLETMLEEYMDDDARSAVVLRRMAEVNESLHRHERA 162
Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
V + + +L S + R+ + + +
Sbjct: 163 VDLWNAYIGLGGLGPEQILEGHRRLAAMQFS--LRRFDAGEDTLQQCLGLPLPDHDKIMC 220
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
++ + R + Q +L + D A L +A L EA + L
Sbjct: 221 MYDLADQNMARERWQDVADLSQQILDSDPDQNLRGLAGYLLADALEQLGKGTEALKQFEL 280
Query: 253 IQERYPQ 259
++ YP
Sbjct: 281 ARDAYPN 287
>gi|326201788|ref|ZP_08191659.1| tetratricopeptide TPR_2 [Clostridium papyrosolvens DSM 2782]
gi|325988388|gb|EGD49213.1| tetratricopeptide TPR_2 [Clostridium papyrosolvens DSM 2782]
Length = 371
Score = 44.8 bits (103), Expect = 0.013, Method: Composition-based stats.
Identities = 20/122 (16%), Positives = 45/122 (36%)
Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
Y Q + + + ++ K N A + G + +Y A
Sbjct: 247 YGQYKYVEAADMLLALPAKDLSAENKKKYDSIKANILNSAANQLTTEGNSLFNKKKYKEA 306
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
I + + V + ++A+ L ++YVA + E + + YP ++RY ++
Sbjct: 307 IQKLEKVFTYGAKWPFGDKALYVLGKSYVANNEPQKGAETYNKLINDYPASTYSRYAKSR 366
Query: 270 VK 271
++
Sbjct: 367 LE 368
>gi|317052296|ref|YP_004113412.1| tetratricopeptide repeat-containing protein [Desulfurispirillum
indicum S5]
gi|316947380|gb|ADU66856.1| Tetratricopeptide TPR_1 repeat-containing protein
[Desulfurispirillum indicum S5]
Length = 293
Score = 44.8 bits (103), Expect = 0.013, Method: Composition-based stats.
Identities = 15/74 (20%), Positives = 28/74 (37%)
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+ + + GE+ A+ F V N+ + A+ ++ + E Y A A E +
Sbjct: 175 YDQAMNFYRIGEFPQALIAFDQVFKNFPTSNLADNSLYWIGEIYYAQNDYVSAFEYFDRV 234
Query: 254 QERYPQGYWARYVE 267
+YP G
Sbjct: 235 TRQYPDGSKTPDAY 248
Score = 42.1 bits (96), Expect = 0.077, Method: Composition-based stats.
Identities = 19/130 (14%), Positives = 37/130 (28%), Gaps = 2/130 (1%)
Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
+ + + + + + F N IG Y
Sbjct: 162 FEFEDYSSDPSPLYDQAMNFYR--IGEFPQALIAFDQVFKNFPTSNLADNSLYWIGEIYY 219
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
+ +YV+A F V Y D +A + A EA +V++ +P
Sbjct: 220 AQNDYVSAFEYFDRVTRQYPDGSKTPDAYLKKGFALERQGKYAEALDVLNYTANMFPDHP 279
Query: 262 WARYVETLVK 271
E +++
Sbjct: 280 VLPLAEQMIR 289
Score = 36.3 bits (81), Expect = 4.7, Method: Composition-based stats.
Identities = 21/116 (18%), Positives = 41/116 (35%)
Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
V + +Y++A+ F + F +A F+Q ++FP + +A SL + Y
Sbjct: 160 VEFEFEDYSSDPSPLYDQAMNFYRIGEFPQALIAFDQVFKNFPTSNLADNSLYWIGEIYY 219
Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
+ Y A + QYP+ Y G + + + +
Sbjct: 220 AQNDYVSAFEYFDRVTRQYPDGSKTPDAYLKKGFALERQGKYAEALDVLNYTANMF 275
>gi|254506051|ref|ZP_05118195.1| Tol system periplasmic component YbgF [Vibrio parahaemolyticus 16]
gi|219550869|gb|EED27850.1| Tol system periplasmic component YbgF [Vibrio parahaemolyticus 16]
Length = 260
Score = 44.8 bits (103), Expect = 0.013, Method: Composition-based stats.
Identities = 10/93 (10%), Positives = 29/93 (31%)
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
+F + + + + +Y D+ +A+ +L +
Sbjct: 167 QFQKDYPDSSFTPNSHYWLGQLYFAKKQDKEAVKSFAAVISYQDSNKRADALVKLGDIAS 226
Query: 239 ALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
++A + + + YP A+ + +K
Sbjct: 227 RNNNTEQANKYYQQVLDEYPSSASAKLAKERIK 259
Score = 41.3 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 29/79 (36%), Gaps = 3/79 (3%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
LK+ +Y AI FQ +Y D+ + L + Y A EA + +
Sbjct: 145 YQNAVDLILKKRDYTGAIAAFQQFQKDYPDSSFTPNSHYWLGQLYFAKKQDKEAVKSFAA 204
Query: 253 IQERYPQGYWARYVETLVK 271
+ Y + + LVK
Sbjct: 205 VIS-YQDSN--KRADALVK 220
>gi|95929293|ref|ZP_01312037.1| Tetratricopeptide TPR_2 [Desulfuromonas acetoxidans DSM 684]
gi|95134791|gb|EAT16446.1| Tetratricopeptide TPR_2 [Desulfuromonas acetoxidans DSM 684]
Length = 576
Score = 44.8 bits (103), Expect = 0.013, Method: Composition-based stats.
Identities = 36/252 (14%), Positives = 68/252 (26%), Gaps = 12/252 (4%)
Query: 7 RAICIFEAWAYQLYKFALTIFFSIAVCFLVGWE---RQSSRDVYLDSVTDVRYQREVYEK 63
R +F W + +F L + + + + S V Y
Sbjct: 4 RGNTLFSFWRFVPGRFFLIGSLLLLM--MTACSLPPKPSPLSVEEQQRYQRAQAYLAYAD 61
Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL-LMSAFVQYSAGKYQQAASLGEEYIT 122
A L L + + A E + + L + +
Sbjct: 62 ARLHLIDGDVDAAIEALQRAVTFDDQSPYLFAVLASIHLDRGQTQQAQDYLNQALVLEPH 121
Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVP--YDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
+ VY+ G + + + + ++SR+ +
Sbjct: 122 HLASELMLADVYHAQGKTDQAIQAFRQVLDRHPDIEDVYLHISRLYLSLQAYDKAEQILL 181
Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY--- 237
+ Q +E+ Y RG+Y AI ++ + + RL+E
Sbjct: 182 QWLKRQPQSVDGLMELANLYRLRGDYQQAITTYRQAIELTPHDRRIYLPLGRLLEQQRQF 241
Query: 238 -VALALMDEARE 248
AL L DEA
Sbjct: 242 DEALTLYDEAAR 253
Score = 42.5 bits (97), Expect = 0.065, Method: Composition-based stats.
Identities = 22/234 (9%), Positives = 70/234 (29%), Gaps = 18/234 (7%)
Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
+ + E A L+ ++ +A + Q P L Q +
Sbjct: 187 QPQSVDGLMELANLYRLRGDYQQAITTYRQAIELTPHDRRIYLPLGRLLEQQRQFDEALT 246
Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
++ + Y++ ++ V + ++ + ++ Y
Sbjct: 247 LYDEAARQTEDQAYFDHLGSTLLIEQGRYSEALQRVESIVQHDPADVEALGKLGYIYIEL 306
Query: 173 PYVK--GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
+ F + + ++++ + L+ + ++ ++ + + +EA+
Sbjct: 307 ERWSEAESMFRQALPYHPVSSQLFYWLAFALEHQQRWEEAIQYYQLVEHP--SALKKEAL 364
Query: 231 ARLVEAYVALALMDEARE--------------VVSLIQERYPQGYWARYVETLV 270
R+ Y + +D+A E V + Y + +++
Sbjct: 365 VRMSVTYNHMNNLDKAAESLVHLLELDQSDVRVFLQLVSLYQRSQRYDDALSVL 418
>gi|224372380|ref|YP_002606752.1| TPR repeat protein [Nautilia profundicola AmH]
gi|223589863|gb|ACM93599.1| TPR repeat protein [Nautilia profundicola AmH]
Length = 297
Score = 44.8 bits (103), Expect = 0.013, Method: Composition-based stats.
Identities = 12/107 (11%), Positives = 34/107 (31%), Gaps = 1/107 (0%)
Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD-AE 224
+ Y + A +G K+G Y A+ ++ ++ Y
Sbjct: 189 YFYSGKLNKAEELFAYTLQKKYLPATSSYYLGEIAYKQGRYKEALAFYKKSISLYPKKTS 248
Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+ + +++ L A+ + +P +A+ + ++
Sbjct: 249 FTDRLLYHTGMSFLKLNQKQNAKLTFKKLISDFPNSKYAKLAKKELE 295
>gi|182680531|ref|YP_001834677.1| tol-pal system protein YbgF [Beijerinckia indica subsp. indica ATCC
9039]
gi|182636414|gb|ACB97188.1| tol-pal system protein YbgF [Beijerinckia indica subsp. indica ATCC
9039]
Length = 395
Score = 44.8 bits (103), Expect = 0.013, Method: Composition-based stats.
Identities = 18/66 (27%), Positives = 32/66 (48%)
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+G Y +RG A ++ + +Y+++ A EAM RL ++ AL ++A I
Sbjct: 312 YYLGETYYQRGRQREAAEQYLKISTHYANSNRAPEAMLRLGQSLNALGAKEQACATFGEI 371
Query: 254 QERYPQ 259
+YP
Sbjct: 372 DRKYPN 377
Score = 40.2 bits (91), Expect = 0.31, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 28/74 (37%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ ++ YL++ EY AA F LA S + +A+ L E Y EA E
Sbjct: 274 DYDLALGYLRQKEYEAAEKSFTAFLAKNSKSRLTPDAIYYLGETYYQRGRQREAAEQYLK 333
Query: 253 IQERYPQGYWARYV 266
I Y A
Sbjct: 334 ISTHYANSNRAPEA 347
>gi|307579951|gb|ADN63920.1| tol-pal system protein YbgF [Xylella fastidiosa subsp. fastidiosa
GB514]
Length = 259
Score = 44.8 bits (103), Expect = 0.013, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 27/70 (38%), Gaps = 2/70 (2%)
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
K +Y A F L Y + + A+ L E+Y A+ A + RYP
Sbjct: 144 KNSKYADAAELFMSFLQLYPNGVYTPNALYWLGESYYAMHDFVSAEAQFRTLLSRYPTHD 203
Query: 262 WARYVETLVK 271
+ +L+K
Sbjct: 204 --KASGSLLK 211
Score = 35.9 bits (80), Expect = 6.2, Method: Composition-based stats.
Identities = 18/121 (14%), Positives = 42/121 (34%), Gaps = 14/121 (11%)
Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
+ ++ Y N Y A +++ G Y ++V+A
Sbjct: 144 KNSKYADAAELFMSFLQLYPNGVYTPNALYWL--------------GESYYAMHDFVSAE 189
Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
+F+ +L+ Y + A ++ + D A+ + + +YP AR + +
Sbjct: 190 AQFRTLLSRYPTHDKASGSLLKEALCQANQGKNDAAQHSLEQVLSQYPGTDAARLAQERL 249
Query: 271 K 271
+
Sbjct: 250 Q 250
>gi|171915884|ref|ZP_02931354.1| TPR domain protein [Verrucomicrobium spinosum DSM 4136]
Length = 596
Score = 44.8 bits (103), Expect = 0.013, Method: Composition-based stats.
Identities = 30/229 (13%), Positives = 72/229 (31%), Gaps = 19/229 (8%)
Query: 30 IAVCFLVGWERQSSRDVYLDSVTDVRYQRE---VYEKAVLFLKEQNFSKAYEYFNQCSRD 86
+ +C L+ + + R + E Y +A+ + ++ A + F Q SR
Sbjct: 352 LNLCKLLRFANNAERFEKFTQRAQQLFPGEPRITYHRAIALTQGDKYADAAKLFEQASRQ 411
Query: 87 FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146
+ + +Q + ++ + D M+Y +
Sbjct: 412 AETNAAELLDDQFHFHWGVALERSRQFDAAARQFEKSITLTPAHDPPRAANTMNY--LGY 469
Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
+ Q + + E N+P + ++ R + E+ R
Sbjct: 470 MWLDQGQHLDKAEQLIRKANELEQNNPAFVDSLGWLLFKRGKAKEALTELLRA------- 522
Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
+ ++ +SD+ E + + +AY L ++A+ + E
Sbjct: 523 -------EHLMKEFSDSGADAEILDHIAQAYEQLGQTEDAKSYWKRVLE 564
>gi|258406366|ref|YP_003199108.1| Tetratricopeptide TPR_2 repeat-containing protein [Desulfohalobium
retbaense DSM 5692]
gi|257798593|gb|ACV69530.1| Tetratricopeptide TPR_2 repeat protein [Desulfohalobium retbaense
DSM 5692]
Length = 252
Score = 44.8 bits (103), Expect = 0.013, Method: Composition-based stats.
Identities = 25/259 (9%), Positives = 62/259 (23%), Gaps = 17/259 (6%)
Query: 19 LYKFALTIFFSIAVCF--LVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76
+ +F I + L G +L T E A +L +
Sbjct: 1 MLRFVRIAPLLICLIGGGLAGCA-------HLAPTTHSPVLEAHLELAEAYLNNDKPRLS 53
Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN-----VD 131
+ + + L ++ + ++ ++ N
Sbjct: 54 LKELRKIGASGDHSKRYHFDLGLTYMALSQWPAAAKHLRQAVAIDPEFAQAWNNLGQVYV 113
Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
A + + ++R+ ++ ++
Sbjct: 114 AQSRPDKAEQAFQTALDTLTYLSPERAALNLARLYQQTDRPQKAADLALRAIEENDRFEP 173
Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
+ + + +G+ A+ R + A + L E ++ + AR
Sbjct: 174 AYLVLNEVLVSQGQIEEALTRLETAQAKLPKRPAM---LLALAENHLRVGNTAYARTWFQ 230
Query: 252 LIQERYPQGYWARYVETLV 270
I PQ A +
Sbjct: 231 RIIAAAPQSEEAEVARDYL 249
>gi|110833621|ref|YP_692480.1| hypothetical protein ABO_0760 [Alcanivorax borkumensis SK2]
gi|110646732|emb|CAL16208.1| conserved hypothetical protein [Alcanivorax borkumensis SK2]
Length = 254
Score = 44.8 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 15/117 (12%), Positives = 34/117 (29%)
Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
+ + + + + A K + A FQ
Sbjct: 134 YNAAKDKLVAGDFSGAIAGFEAYLKDFPQGLSRADAHFWAGKLYSDQKEPDLQKAQGHFQ 193
Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
V NY D A +++ L + A+ + + ++Y A+ + L++
Sbjct: 194 AVADNYPDHSKASKSLYILAVMQANAGEISPAKVNLHKLIKQYQDSREAKQAQGLLE 250
Score = 37.9 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 13/91 (14%), Positives = 24/91 (26%)
Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
+ + + D R Y A L +FS A F +DFP +
Sbjct: 112 GSTAKEEAAVAGNNDPEADRAAYNAAKDKLVAGDFSGAIAGFEAYLKDFPQGLSRADAHF 171
Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKN 129
+ + + + G +
Sbjct: 172 WAGKLYSDQKEPDLQKAQGHFQAVADNYPDH 202
>gi|262065894|ref|ZP_06025506.1| conserved hypothetical protein [Fusobacterium periodonticum ATCC
33693]
gi|291380374|gb|EFE87892.1| conserved hypothetical protein [Fusobacterium periodonticum ATCC
33693]
Length = 438
Score = 44.8 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 9/43 (20%), Positives = 18/43 (41%)
Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
E + +Y L E + + L+++ +P W + E L
Sbjct: 391 PEIYYNIASSYAKLGNRAEVTKYIRLLKQEFPNNSWTKKSEAL 433
>gi|303326657|ref|ZP_07357099.1| TPR domain protein [Desulfovibrio sp. 3_1_syn3]
gi|302862645|gb|EFL85577.1| TPR domain protein [Desulfovibrio sp. 3_1_syn3]
Length = 1004
Score = 44.8 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 21/238 (8%), Positives = 60/238 (25%), Gaps = 16/238 (6%)
Query: 40 RQSSRDVYLDSVTDVRYQREVYEKA------VLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93
+ L Y +A +LK + K + S +
Sbjct: 745 GNEQKAFELLGEFLKSPMDLQYGEAAFTEFFNRYLKAGAWDKVLDLGKLVSTWDMKPQLR 804
Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153
++ A + A ++ ++ + A+ +D+
Sbjct: 805 KQLDYALALSAQNLNLTGPALAMWQQLAARPDIPLYQRAYATYFLARDAENRKDIKSSYE 864
Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213
+ ++ +++ + R + A + + A
Sbjct: 865 LNRKVIDLFTQL----------QDERSDKADPQRIKDAVAALMDICEVGNRIPEALQWVN 914
Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+ ++ R Y L A+ ++ + R+P +A+ ++
Sbjct: 915 RYNDFVPENSPEYPGLRFREARLYRKLGNSSRAQALLEDLARRFPDSPFAKAAAAELR 972
Score = 40.5 bits (92), Expect = 0.26, Method: Composition-based stats.
Identities = 35/221 (15%), Positives = 66/221 (29%), Gaps = 20/221 (9%)
Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
D + V ++ +A + E F +A + R+ +L
Sbjct: 319 DEQGNPVPKPPEPDKMLAEAERLISENKFDEALPQLEKIRALTDITPEMREKVLYYISDC 378
Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
A + E ++ E+ N D + + Y+
Sbjct: 379 LWARYADNPLAGYEAIVSSTSEAMNADLR-SPRVPDALLRLGLANVNVGNLVDAGGYIVA 437
Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
++ RY + +A +G+ LKR A F +VL Y ++
Sbjct: 438 LLRRYPD--------------YPGVAQGFTALGQAQLKRKLNAEAEQSFSIVLDKYPESS 483
Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
+ A L +A+ D+A+ I + W RY
Sbjct: 484 QLQAASVGLAQAFFNQKKHDQAQ-----IILDFISKRWPRY 519
>gi|294783902|ref|ZP_06749224.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA]
gi|294479714|gb|EFG27493.1| conserved hypothetical protein [Fusobacterium sp. 1_1_41FAA]
Length = 441
Score = 44.8 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 10/43 (23%), Positives = 19/43 (44%)
Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
E + +Y L E + + L+++ +P WA+ E L
Sbjct: 394 PEIYYNIASSYAKLGNRVEVTKYIRLLKQEFPSSSWAKKSEAL 436
>gi|294507043|ref|YP_003571101.1| Conserved hypothetical protein, containing tetratricopeptide repeat
[Salinibacter ruber M8]
gi|294343371|emb|CBH24149.1| Conserved hypothetical protein, containing tetratricopeptide repeat
[Salinibacter ruber M8]
Length = 1003
Score = 44.8 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 14/94 (14%), Positives = 31/94 (32%)
Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
+ + + A+ + G +A F+ VL D A +A+ L +A
Sbjct: 572 DSISRAEMKDQRAVAQYELANALFRAAGRPDSAQTWFRRVLDETPDHPVAPQALYGLAQA 631
Query: 237 YVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
+ A + + + +P A+ +
Sbjct: 632 HRAQGDTAAGDDAYRRLIDEHPDTPIAKRAREQL 665
>gi|52842259|ref|YP_096058.1| outer membrane protein [Legionella pneumophila subsp. pneumophila
str. Philadelphia 1]
gi|52629370|gb|AAU28111.1| outer membrane protein [Legionella pneumophila subsp. pneumophila
str. Philadelphia 1]
Length = 322
Score = 44.8 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 22/105 (20%), Positives = 41/105 (39%)
Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
+RY + A E +G YL + +Y AI F++VL Y + A
Sbjct: 213 KRYDEAIKSMQTFVQKYPRGGYTANAEYWLGELYLVKKDYSKAIEHFEIVLQQYPSSSKA 272
Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
++ + AY EA++ + + YP A+ + ++
Sbjct: 273 AASLLKSGYAYAEKGDKQEAKKRFQQVVKTYPDTPTAQLASSKLE 317
Score = 39.0 bits (88), Expect = 0.72, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 29/75 (38%), Gaps = 2/75 (2%)
Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
+K Y AI Q + Y + A L E Y+ +A E ++ ++
Sbjct: 206 AYELVKNKRYDEAIKSMQTFVQKYPRGGYTANAEYWLGELYLVKKDYSKAIEHFEIVLQQ 265
Query: 257 YPQGYWARYVETLVK 271
YP ++ +L+K
Sbjct: 266 YPSS--SKAAASLLK 278
>gi|317478355|ref|ZP_07937519.1| tetratricopeptide [Bacteroides sp. 4_1_36]
gi|316905514|gb|EFV27304.1| tetratricopeptide [Bacteroides sp. 4_1_36]
Length = 1014
Score = 44.8 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 30/220 (13%), Positives = 62/220 (28%), Gaps = 22/220 (10%)
Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
+ Y + ++++S A F + + + + +
Sbjct: 516 DTEMFALAYYNLGYIAFHQKDYSTAENRFRNFVQLEKGENPTALADAYNRIGDCNLHVRR 575
Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
+ + + DY YY + + +L ++Y +
Sbjct: 576 FDEAKQYYTKAESLGTPAGDYSYYQLALVAGLQKDYSGKVTLLDRLAVKYPN-------- 627
Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231
E GR Y++ AI F+ +L Y ++ + +A A
Sbjct: 628 --------------SPYAINALYEKGRSYVQSNNSPQAIAAFRELLGKYPESPVSRKAAA 673
Query: 232 RLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+ Y D A E + +YP AR +K
Sbjct: 674 EIGLLYYQNDDYDRAIEAYKHVVTQYPGSEEARLAMRDLK 713
Score = 43.2 bits (99), Expect = 0.037, Method: Composition-based stats.
Identities = 25/245 (10%), Positives = 60/245 (24%), Gaps = 18/245 (7%)
Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKS 96
+ R + Q+ +++ F +A YFNQ +
Sbjct: 427 KSIDRISHPSKAILEAKQKILFQLGTQSFANTQFEQAIGYFNQSVTLGQYNLQTKADALY 486
Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
L ++ + + + +T+ +++ YY +G + R
Sbjct: 487 WLGESYYRLNRMREAARNFNEYLSLTRQRDTEMFALAYYNLGYIAFHQKDYSTAENRFRN 546
Query: 157 --------------LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
+ K
Sbjct: 547 FVQLEKGENPTALADAYNRIGDCNLHVRRFDEAKQYYTKAESLGTPAGDYSYYQLALVAG 606
Query: 203 -RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
+ +Y + + Y ++ +A A+ +YV +A + +YP+
Sbjct: 607 LQKDYSGKVTLLDRLAVKYPNSPYAINALYEKGRSYVQSNNSPQAIAAFRELLGKYPESP 666
Query: 262 WARYV 266
+R
Sbjct: 667 VSRKA 671
Score = 37.9 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 32/224 (14%), Positives = 65/224 (29%), Gaps = 15/224 (6%)
Query: 48 LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107
+ +YEK +++ N +A F + +P + V+RK+ + Y
Sbjct: 623 VKYPNSPYAINALYEKGRSYVQSNNSPQAIAAFRELLGKYPESPVSRKAAAEIGLLYYQN 682
Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY---------------AQMIRDVPYDQ 152
Y +A + +TQYP S+ + Y +
Sbjct: 683 DDYDRAIEAYKHVVTQYPGSEEARLAMRDLKSIYVDANRVDEFAALAAQMPGEIRFEPSE 742
Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
+ + + ++ R+ + + K + A+
Sbjct: 743 QDSLTYIAAEKVYMKGEAAPAKESFTRYLQSYPGGAFSLNAHYYLCVIGKEQKDDEAVLE 802
Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
L Y D ++EEA+ E D A +Q +
Sbjct: 803 HAGKLLEYPDNPYSEEALLMHGEILFNRQQYDLALADYKKLQAK 846
>gi|119471077|ref|ZP_01613636.1| putative lytic cell-wall binding lipoprotein [Alteromonadales
bacterium TW-7]
gi|119445917|gb|EAW27198.1| putative lytic cell-wall binding lipoprotein [Alteromonadales
bacterium TW-7]
Length = 623
Score = 44.8 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 31/260 (11%), Positives = 79/260 (30%), Gaps = 22/260 (8%)
Query: 25 TIFFSIAVCFLVGWERQSS-----RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
+ +++ L G +SS + V + + + R A+ +LK N S+A
Sbjct: 4 ILAITLSALALSGCVTESSYNGSNKPVVKNKINNAGAARTRIALALQYLKTGNNSQAK-- 61
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
R FA + A+ G+ A ++ + P+ N Y +
Sbjct: 62 -YNLERAAEFAPNLPEVHYSMAYYYQQVGENPLADRAYQKALDIKPDDPNTLNNYGVFLC 120
Query: 140 SYAQMIRDVPYDQRATK--------LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
+ R +A + + ++ + + + +Q +
Sbjct: 121 GIDEYDRATDQFLKAIEIPTYIRVAESYENLALCAIEFDDFENAETYFKQALNHSSQRTS 180
Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
+ + + + + A + + A+ + ++EA +V S
Sbjct: 181 TLISLAALFYAKSDLYKANDILKKHDDTGRVSS---RALMLSYLVKNRMGRIEEAEKVAS 237
Query: 252 LIQERYPQGYWARYVETLVK 271
+ + Y + + +
Sbjct: 238 TLLQTYSTS---KEAYAIRE 254
>gi|253699982|ref|YP_003021171.1| sporulation domain protein [Geobacter sp. M21]
gi|251774832|gb|ACT17413.1| Sporulation domain protein [Geobacter sp. M21]
Length = 409
Score = 44.4 bits (102), Expect = 0.015, Method: Composition-based stats.
Identities = 16/83 (19%), Positives = 32/83 (38%)
Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
++ A + + + + G Y A + +L + EEA+ L ++Y
Sbjct: 17 CCPLISHAAQPDEAAMMATAKGHFQDGGYYYASTWLERILKKWPKTGQREEALVMLAKSY 76
Query: 238 VALALMDEAREVVSLIQERYPQG 260
A ++A V + + YPQ
Sbjct: 77 AATGREEKAARTVKTLLKEYPQT 99
>gi|160891540|ref|ZP_02072543.1| hypothetical protein BACUNI_03992 [Bacteroides uniformis ATCC 8492]
gi|156858947|gb|EDO52378.1| hypothetical protein BACUNI_03992 [Bacteroides uniformis ATCC 8492]
Length = 1014
Score = 44.4 bits (102), Expect = 0.015, Method: Composition-based stats.
Identities = 30/220 (13%), Positives = 62/220 (28%), Gaps = 22/220 (10%)
Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
+ Y + ++++S A F + + + + +
Sbjct: 516 DTEMFALAYYNLGYIAFHQKDYSTAENRFRNFVQLEKGENPTALADAYNRIGDCNLHVRR 575
Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
+ + + DY YY + + +L ++Y +
Sbjct: 576 FDEAKQYYTKAESLGTPAGDYSYYQLALVAGLQKDYSGKVTLLDRLAVKYPN-------- 627
Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231
E GR Y++ AI F+ +L Y ++ + +A A
Sbjct: 628 --------------SPYAINALYEKGRSYVQSNNSPQAIAAFRELLGKYPESPVSRKAAA 673
Query: 232 RLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+ Y D A E + +YP AR +K
Sbjct: 674 EIGLLYYQNDDYDRAIEAYKHVVTQYPGSEEARLAMRDLK 713
Score = 43.2 bits (99), Expect = 0.039, Method: Composition-based stats.
Identities = 25/245 (10%), Positives = 60/245 (24%), Gaps = 18/245 (7%)
Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKS 96
+ R + Q+ +++ F +A YFNQ +
Sbjct: 427 KSIDRISHPSKAILEAKQKILFQLGTQSFANTQFEQAIGYFNQSVTLGQYNLQTKADALY 486
Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
L ++ + + + +T+ +++ YY +G + R
Sbjct: 487 WLGESYYRLNRMREAARNFNEYLSLTRQRDTEMFALAYYNLGYIAFHQKDYSTAENRFRN 546
Query: 157 --------------LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
+ K
Sbjct: 547 FVQLEKGENPTALADAYNRIGDCNLHVRRFDEAKQYYTKAESLGTPAGDYSYYQLALVAG 606
Query: 203 -RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
+ +Y + + Y ++ +A A+ +YV +A + +YP+
Sbjct: 607 LQKDYSGKVTLLDRLAVKYPNSPYAINALYEKGRSYVQSNNSPQAIAAFRELLGKYPESP 666
Query: 262 WARYV 266
+R
Sbjct: 667 VSRKA 671
Score = 37.9 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 32/224 (14%), Positives = 65/224 (29%), Gaps = 15/224 (6%)
Query: 48 LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107
+ +YEK +++ N +A F + +P + V+RK+ + Y
Sbjct: 623 VKYPNSPYAINALYEKGRSYVQSNNSPQAIAAFRELLGKYPESPVSRKAAAEIGLLYYQN 682
Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY---------------AQMIRDVPYDQ 152
Y +A + +TQYP S+ + Y +
Sbjct: 683 DDYDRAIEAYKHVVTQYPGSEEARLAMRDLKSIYVDANRVDEFAALAAQMPGEIRFEPSE 742
Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
+ + + ++ R+ + + K + A+
Sbjct: 743 QDSLTYIAAEKVYMKGEAAPAKESFTRYLQSYPGGAFSLNAHYYLCVIGKEQKDDEAVLE 802
Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
L Y D ++EEA+ E D A +Q +
Sbjct: 803 HAGKLLEYPDNPYSEEALLMHGEILFNRQQYDLALADYKKLQAK 846
>gi|254884530|ref|ZP_05257240.1| lipoprotein [Bacteroides sp. 4_3_47FAA]
gi|294778637|ref|ZP_06744059.1| outer membrane assembly lipoprotein YfiO [Bacteroides vulgatus
PC510]
gi|254837323|gb|EET17632.1| lipoprotein [Bacteroides sp. 4_3_47FAA]
gi|294447586|gb|EFG16164.1| outer membrane assembly lipoprotein YfiO [Bacteroides vulgatus
PC510]
Length = 285
Score = 44.4 bits (102), Expect = 0.015, Method: Composition-based stats.
Identities = 45/277 (16%), Positives = 89/277 (32%), Gaps = 32/277 (11%)
Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
++ K+ I ++ L + D YE A + + +KA
Sbjct: 7 KMKKY--IIIALVSGTVLTSCGEYNKVLKSTDYEYK-------YEAAKSYFGKGQNTKAA 57
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
+ A +SL M Y+ G + A+ Y YP + Y
Sbjct: 58 TILEELITIMKGTDKAEESLYMLGMTYYNQGDFITASHYFTTYYNTYPRGVYTEQARYFS 117
Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV--- 194
G + + DQ +T +Q + +E + S + A+ + +++L K+
Sbjct: 118 GKALFLDTPEPRLDQSSTYKAIQELQMFMEYFPTSSRRQDAQQMIFDLQDKLVMKDYLAA 177
Query: 195 ----------EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL-- 242
Y Y++ I Q L +Y + E+ ++ A +A
Sbjct: 178 KLYYDLGSYTGNSTYSTTGNNYLSCIVTAQNALKDYPYTKMREDLSILVLRAKYDMAKAS 237
Query: 243 --------MDEAREVVSLIQERYPQGYWARYVETLVK 271
M E + + +P + + VE++ K
Sbjct: 238 VEEKKEERMRETIDEYYSFKNEFPDSKYTKEVESIYK 274
>gi|265756511|ref|ZP_06090717.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|263233699|gb|EEZ19314.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
Length = 278
Score = 44.4 bits (102), Expect = 0.015, Method: Composition-based stats.
Identities = 45/274 (16%), Positives = 86/274 (31%), Gaps = 30/274 (10%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
I ++ L + D YE A + + +KA
Sbjct: 1 MKKYIIIALVSGTVLTSCGEYNKVLKSTDYEYK-------YEAAKSYFGKGQNTKAATIL 53
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
+ A +SL M Y+ G + A+ Y YP + V Y G +
Sbjct: 54 EELITIMKGTDKAEESLYMLGMTYYNQGDFITASHYFTTYYNTYPRGVYTEQVRYFSGKA 113
Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV------ 194
+ DQ +T +Q + +E + S + A+ + +++L K+
Sbjct: 114 LFLDTPEPRLDQSSTYKAIQELQMFMEYFPTSSRRQDAQQMIFDLQDKLVMKDYLAAKLY 173
Query: 195 -------EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL----- 242
Y Y++ I Q L +Y + E+ ++ A +A
Sbjct: 174 YDLGSYTGNSTYSTTGNNYLSCIVTAQNALKDYPYTKMREDLSILVLRAKYDMAKASVEE 233
Query: 243 -----MDEAREVVSLIQERYPQGYWARYVETLVK 271
M E + + +P + + VE++ K
Sbjct: 234 KKEERMRETIDEYYSFKNEFPDSKYTKEVESIYK 267
>gi|253702174|ref|YP_003023363.1| tol-pal system protein YbgF [Geobacter sp. M21]
gi|251777024|gb|ACT19605.1| tol-pal system protein YbgF [Geobacter sp. M21]
Length = 283
Score = 44.4 bits (102), Expect = 0.015, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 36/93 (38%)
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
N A + IG Y ++ A+ F+ V+ NY D + A AM + A+
Sbjct: 189 FLEHHPKHNLAANAQYWIGESYYSEKKFEDAVLEFENVIKNYPDKDKAPAAMLKQGMAFR 248
Query: 239 ALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
L A ++ + E +P+ A+ K
Sbjct: 249 ELGDTKSANYILKRLVEEHPKSEEAKIAREKYK 281
Score = 38.2 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 21/116 (18%), Positives = 40/116 (34%)
Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
+ + + + +Y+K +KE N KA E F+ P +A +
Sbjct: 147 KGVEEQAKKAAQLQQAPDYLYQKGYEAMKEGNLPKARELFSSFLEHHPKHNLAANAQYWI 206
Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
YS K++ A E I YP+ GM++ ++ + +
Sbjct: 207 GESYYSEKKFEDAVLEFENVIKNYPDKDKAPAAMLKQGMAFRELGDTKSANYILKR 262
Score = 38.2 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 24/231 (10%), Positives = 60/231 (25%), Gaps = 8/231 (3%)
Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
S+ + G Q + +++ + EK + ++ +
Sbjct: 10 SLVLLAFFGCASQGELESVRRDSDEMKNRLFTMEKGLNDVR--------AEVREGVEKSL 61
Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
L + + + T ++ + V +
Sbjct: 62 AGYRQSLESLQADMSGFQKEMAGIRKGGADLQATLESARVDMQLLTGKVDDVRILAQKPA 121
Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
+ + + ++ + ER + Q + G +K G
Sbjct: 122 DDIALLKEDLTKRLALLEERMAKMEKGVEEQAKKAAQLQQAPDYLYQKGYEAMKEGNLPK 181
Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
A F L ++ A A + E+Y + ++A + + YP
Sbjct: 182 ARELFSSFLEHHPKHNLAANAQYWIGESYYSEKKFEDAVLEFENVIKNYPD 232
>gi|89898740|ref|YP_515850.1| hypothetical protein CF0933 [Chlamydophila felis Fe/C-56]
gi|89332112|dbj|BAE81705.1| conserved hypothetical protein [Chlamydophila felis Fe/C-56]
Length = 318
Score = 44.4 bits (102), Expect = 0.015, Method: Composition-based stats.
Identities = 27/247 (10%), Positives = 76/247 (30%), Gaps = 19/247 (7%)
Query: 27 FFSIAVCFLVGW------ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
F +++ G S + E + +L++Q + +A F
Sbjct: 7 FVVLSLLLCSGCYARPVSFEPFSGKLSPQKFVPKYSPEEYLSEGKYYLEQQRYRQALLCF 66
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
+ FP + ++L ++ + + A Y+ + + + ++
Sbjct: 67 GMITHHFPKDPLCTEALYLTGVCYFKNDQPDLAEKAFASYMQRPDSDYSEELFLMKYSIA 126
Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
+ L+ ++ ++ + ++ A G
Sbjct: 127 QSFAQGKRKRIFL-----LEGFPKLANADADALRIYDEILTAFPNKDLGAQALYLKGDLL 181
Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD--------EAREVVSL 252
+ + + AI F+ + + + ++ RL E Y+ A + A+
Sbjct: 182 IIKKDLPEAIKTFKKLTLQFPSHALSPKSFVRLSEIYLMQAKKEPHNVQYLNLAKINEEA 241
Query: 253 IQERYPQ 259
I++++P
Sbjct: 242 IKKQHPN 248
Score = 35.5 bits (79), Expect = 8.8, Method: Composition-based stats.
Identities = 14/73 (19%), Positives = 29/73 (39%), Gaps = 1/73 (1%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ G+YYL++ Y A+ F ++ ++ EA+ Y D A + +
Sbjct: 46 YLSEGKYYLEQQRYRQALLCFGMITHHFPKDPLCTEALYLTGVCYFKNDQPDLAEKAFAS 105
Query: 253 IQERYPQGYWARY 265
+R P ++
Sbjct: 106 YMQR-PDSDYSEE 117
>gi|296123820|ref|YP_003631598.1| hypothetical protein Plim_3586 [Planctomyces limnophilus DSM 3776]
gi|296016160|gb|ADG69399.1| Tetratricopeptide TPR_2 repeat protein [Planctomyces limnophilus
DSM 3776]
Length = 1077
Score = 44.4 bits (102), Expect = 0.015, Method: Composition-based stats.
Identities = 25/224 (11%), Positives = 71/224 (31%), Gaps = 9/224 (4%)
Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
+ + D + ++A + + + A F + R + + +
Sbjct: 580 KQFEAEFPGDPAVAAALMDQAEVAEAAKQWPVALADFEKLKRLAAGTTNEPFAWRGTGWS 639
Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
++ G Y+ AA + ++P+ Y G S+ + T+ L+
Sbjct: 640 RFRLGDYKLAAEEFAQLSAKFPQHPLQAEAMYYEGESWL--------LAKETEKALKVFQ 691
Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
+ +R+ + + + + R + G A ++ +L + A
Sbjct: 692 QAFDRF-TPKDAASVKEELKAPVLFGYRSGLMMARTLEQTGRLEQADQAYETLLKKFPKA 750
Query: 224 EHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
E ++ + ++A ++ + + P+ A +
Sbjct: 751 EVFDQLLNEWALINYEAGRFEQADKIFARLVAECPESPLADNAK 794
Score = 37.1 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 35/240 (14%), Positives = 80/240 (33%), Gaps = 25/240 (10%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
K L + + + G++ + + + + + V ++ + A E F
Sbjct: 22 KARLACSSLLWLAMICGFQSFALQPTLAQPPANSADLSD-FNNGVGLYRQSRWGDAVESF 80
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
Q + P + +S + + Y +A ++ E++ +PE+ NV Y
Sbjct: 81 RQFIKANPQSPRVPESQIYIGLALINQQNYVEARTVLREFLKNFPENSNVAQARY----- 135
Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
+ + + Q + +E+Y +G
Sbjct: 136 ---RVAECSFLLNDFPAAKQELQSYLEKYPQDALAP--------------RALAYLGDVQ 178
Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ--ERYP 258
L+ + AAI F+ + A++ L +AY A E ++++ I + +P
Sbjct: 179 LQLKDPQAAITTFEEARKRFPAGALADDIEYGLAQAYSAAGKTAEGQKLLDAIAARQNHP 238
Score = 35.9 bits (80), Expect = 5.8, Method: Composition-based stats.
Identities = 10/68 (14%), Positives = 25/68 (36%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ G ++ + A+ F+ + + E+ + A + EAR V+
Sbjct: 60 DFNNGVGLYRQSRWGDAVESFRQFIKANPQSPRVPESQIYIGLALINQQNYVEARTVLRE 119
Query: 253 IQERYPQG 260
+ +P+
Sbjct: 120 FLKNFPEN 127
Score = 35.9 bits (80), Expect = 6.2, Method: Composition-based stats.
Identities = 17/88 (19%), Positives = 34/88 (38%)
Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242
++ ++ IG + + YV A + L N+ + + +A R+ E L
Sbjct: 87 NPQSPRVPESQIYIGLALINQQNYVEARTVLREFLKNFPENSNVAQARYRVAECSFLLND 146
Query: 243 MDEAREVVSLIQERYPQGYWARYVETLV 270
A++ + E+YPQ A +
Sbjct: 147 FPAAKQELQSYLEKYPQDALAPRALAYL 174
>gi|160880636|ref|YP_001559604.1| hypothetical protein Cphy_2504 [Clostridium phytofermentans ISDg]
gi|160429302|gb|ABX42865.1| hypothetical protein Cphy_2504 [Clostridium phytofermentans ISDg]
Length = 188
Score = 44.4 bits (102), Expect = 0.015, Method: Composition-based stats.
Identities = 13/121 (10%), Positives = 36/121 (29%), Gaps = 3/121 (2%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDS---VTDVRYQREVYEKAVLFLKEQNFSK 75
+ K + + + L +QS+ V + + +YE+A+ + + NF+
Sbjct: 1 MKKIYVMLLGICMIIVLCSCSKQSTNQVEESTDFATPKKDKDQIIYEEALDYAYDGNFAS 60
Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
A N+ + + + + + A+ + +
Sbjct: 61 AVSKLNEFVEPYEDSEELIELFGKDISSTFIGTWHCSRANSCNDMDITLTIYPIYRHGEM 120
Query: 136 L 136
Sbjct: 121 Q 121
>gi|118379597|ref|XP_001022964.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89304731|gb|EAS02719.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 2086
Score = 44.4 bits (102), Expect = 0.015, Method: Composition-based stats.
Identities = 28/220 (12%), Positives = 56/220 (25%), Gaps = 10/220 (4%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
++ + Y+ + L+++++ A E F + R R + A
Sbjct: 1787 EVQPKFAKAHYQLGLALLEKKDYKGATEEFKETIRINE-----RFTGAYKAIGLIYYENN 1841
Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
+ + + +++ L Y D + I
Sbjct: 1842 NPSNACKYYLRALECDPFDMESKLGLANCYYLMENFDAAIQNYEEISGIDQNDEIEYNLA 1901
Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD----AEHA 226
N Y+KG + + G F+ L +
Sbjct: 1902 NCYYMKGEINEAINHYKNALNLKQDKPDCLYNLGNAYCIQENFKEALICFEKAIQYDPQN 1961
Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQG-YWARY 265
AM L Y L ++A + + P W Y
Sbjct: 1962 SAAMYNLANTYYVLEDHEKASDYFEKAIQLEPNNIEWHNY 2001
>gi|238785319|ref|ZP_04629308.1| Type IV pilus bioproteinsis/stability protein PilW [Yersinia
bercovieri ATCC 43970]
gi|238713772|gb|EEQ05795.1| Type IV pilus bioproteinsis/stability protein PilW [Yersinia
bercovieri ATCC 43970]
Length = 249
Score = 44.4 bits (102), Expect = 0.015, Method: Composition-based stats.
Identities = 27/252 (10%), Positives = 63/252 (25%), Gaps = 17/252 (6%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
K + L G S + R + + +L + + + A +
Sbjct: 1 MKLTRLWRVCLLAIILTGCSGSSPEKTNQPAAGQTRL-----QLGLEYLAQGDLNAARQN 55
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
+ P A+ + Y + +A+ N +
Sbjct: 56 LEKAVEADPQDYRAQLGM-----AFYEQRIGENSAAEQRYQHAMKLAPGNGTVLNNYGAF 110
Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN------QLAAKE 193
+ Q + +L ++ + N+ Y R + +
Sbjct: 111 LCSLGQYVSAQQQFSAAALLPDYGQVADSLENAGYCFLRANQNDQARLLLSRALKYDPDK 170
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDA-EHAEEAMARLVEAYVALALMDEAREVVSL 252
E +R + QL+L Y + E++ + D +
Sbjct: 171 GEPLLAEAQRHFGEGNRAQAQLLLDIYQHTLPASAESLWLQIRFAALAGRQDSVQRYGKQ 230
Query: 253 IQERYPQGYWAR 264
+ +PQ +
Sbjct: 231 LARSFPQSKQYQ 242
>gi|109896748|ref|YP_660003.1| TPR repeat-containing protein [Pseudoalteromonas atlantica T6c]
gi|109699029|gb|ABG38949.1| TPR repeat [Pseudoalteromonas atlantica T6c]
Length = 917
Score = 44.4 bits (102), Expect = 0.015, Method: Composition-based stats.
Identities = 29/242 (11%), Positives = 67/242 (27%), Gaps = 15/242 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ ++++ L+ +Q+S + + A F+ + + + A
Sbjct: 1 MMNKMRKTIIALSLGMLISCGQQTSEEHI--------------QAAQEFIAQNDSASAII 46
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+ P + AR L + ++ S EY + + Y
Sbjct: 47 SLKTAVQLAPKSPEARFELGKVYLDEKQFESAEKELSRALEYGYDGAKVLPLLTRAYQRT 106
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
+YA + + + + + ++QL V
Sbjct: 107 GAYAAISEMEDNNVDLSNEDKAEIGYFKIVSLVRLNKPDDARAIIADQSQLQTDSVFKSL 166
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDA-EHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
+ P L+N D+ E + L + +++L A + Y
Sbjct: 167 SQAYKDILDKDYPLALQSLSNIKDSHPDHPEVLKLLAQLHLSLGDPKAAAQAFDRYVSLY 226
Query: 258 PQ 259
P
Sbjct: 227 PD 228
>gi|256421366|ref|YP_003122019.1| hypothetical protein Cpin_2327 [Chitinophaga pinensis DSM 2588]
gi|256036274|gb|ACU59818.1| TPR repeat-containing protein [Chitinophaga pinensis DSM 2588]
Length = 1023
Score = 44.4 bits (102), Expect = 0.015, Method: Composition-based stats.
Identities = 37/224 (16%), Positives = 72/224 (32%), Gaps = 22/224 (9%)
Query: 48 LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107
+ S + Q Y LK +++++A ++F R + +A
Sbjct: 510 VPSSGEANAQTASYNMGYALLKAEDYTRALQHFEAAQRTTGPNAARITT--------DAA 561
Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
+ + ++Y + + + Q T + + ++
Sbjct: 562 LRSADCYYMLKDYPKAMALYEKIIANNQPGSDYATYQKSIILGIQGKTNEKVALLKQLGN 621
Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
++ +S + A EI YL +Y AIP + VL + +A
Sbjct: 622 KFPSSGFGNDADL--------------EIANTYLAEEKYNEAIPYLENVLQKQPNGPNAP 667
Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
A+ +L Y D+A + E+YP A T VK
Sbjct: 668 RALLKLGLCYFNKDNDDKALSYYRQVIEKYPNSPEANAALTAVK 711
Score = 38.6 bits (87), Expect = 0.99, Method: Composition-based stats.
Identities = 22/231 (9%), Positives = 61/231 (26%), Gaps = 7/231 (3%)
Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106
+ V Y Y + + +++A F + + ++ + + + Q
Sbjct: 180 SIKEVQGKYYMSANYYYGFIAYYNRQYNEALTSFQRVVNEPKYSAIVPYYIAEIYYFQNK 239
Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
+ + Y E++ + + I
Sbjct: 240 KDQLISYGEPLVKKGGLYYEAELKQLLGQTYFERKEYQKALPYLQEFNDNADEVRKEDIY 299
Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAK-------EVEIGRYYLKRGEYVAAIPRFQLVLAN 219
+ + + + + K +G YL+ + A F N
Sbjct: 300 QLSYSYYQTGNFSKAINGFKQLSSEKDSLGQNSMYLLGDCYLRTNQKANARNAFAFCARN 359
Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
++ + E + + L D A ++ YP+ + + ++
Sbjct: 360 SANPQQQEISRFNYGKLSYELGYQDAAVSELTSFVNTYPRSAYTKEAREIL 410
>gi|325852031|ref|ZP_08171114.1| tetratricopeptide repeat protein [Prevotella denticola CRIS 18C-A]
gi|325484587|gb|EGC87503.1| tetratricopeptide repeat protein [Prevotella denticola CRIS 18C-A]
Length = 1122
Score = 44.4 bits (102), Expect = 0.015, Method: Composition-based stats.
Identities = 14/178 (7%), Positives = 40/178 (22%), Gaps = 1/178 (0%)
Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
+ ++ A + ++ + + + +
Sbjct: 491 WYFYSPTAVQQGKITFQQLWGKRENIDNWQRINQGVVGRIGDTKTPVELTDQQRDSILQA 550
Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
+ L+ Y + + + +
Sbjct: 551 EARQDSIDNARDSLKN-DPHKREYYLAQIPFTPAQLEASNKILEDGLHHSGVIFKDRLDN 609
Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
+ + V +Y D E ++ L Y+ A V+ + +YP+ W
Sbjct: 610 LRLSEKALRRVSDDYPDYEQMDDVYYHLYLLYMRKGDQQMADSYVTRLSRKYPKSKWT 667
Score = 41.7 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 31/235 (13%), Positives = 65/235 (27%), Gaps = 9/235 (3%)
Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
D+ T++ V K+ L + +F +A E + +
Sbjct: 56 GSLEKEKGNKDNFTELIPLYTVGNKSSRELGKGSFDRAIEKAEKAIARHSIKKRPEWTKN 115
Query: 99 MS-AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
++ + S+ + + ++A M R
Sbjct: 116 RRKTERDIEWLSRREYNPFLWKAWMLMGRSQFHEGAFEEAAATFAYMSRIYKGQPAIYGK 175
Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGR-NQLAAKEVEIGR--YYLKRGEYVAAIPRFQ 214
++++ + + + A KE + YYL GE A+P Q
Sbjct: 176 ARAWLAKCYIEQGWLYDAEDIIRNMQRDSLDWRAVKEWDYTYADYYLHSGELSKAVPYLQ 235
Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV-SLIQERYPQGYWARYVET 268
V+ + + + L + AL EA + +I+ P
Sbjct: 236 RVIKHEMRRKQKARELYLLGQVLAALGRNTEAYKAFQRVIRANPP----YELAFN 286
>gi|325297928|ref|YP_004257845.1| outer membrane assembly lipoprotein YfiO [Bacteroides salanitronis
DSM 18170]
gi|324317481|gb|ADY35372.1| outer membrane assembly lipoprotein YfiO [Bacteroides salanitronis
DSM 18170]
Length = 277
Score = 44.4 bits (102), Expect = 0.015, Method: Composition-based stats.
Identities = 48/274 (17%), Positives = 88/274 (32%), Gaps = 30/274 (10%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
I ++V L ++ D YE A + + S+A
Sbjct: 1 MKKYIILSMLSVTMLSSCGEYNTVLKSTDYEYK-------YEAAKGYFAKGQNSRAATLL 53
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
+ A +S M A ++ G Y A+ Y T YP + + G S
Sbjct: 54 EELIPILKGTSNAEESAYMLAMTYFNQGDYISASHYFNVYYTTYPRGTYTELARFFCGKS 113
Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV------ 194
+ DQ +T + + +E + S A+ + +++L KE
Sbjct: 114 LYLDTPEPRLDQTSTYKAIDELQMFIEYFPTSSRKDLAQNMIYELQDKLVEKEYLSAKLY 173
Query: 195 -------EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD--- 244
Y Y+AA+ Q VL +Y + E+ ++ A +A
Sbjct: 174 YDLGSYTGNTSYSSTGNNYLAAVVTAQNVLRDYPYTKRREDLSILILRAKYDMAKESVLE 233
Query: 245 -------EAREVVSLIQERYPQGYWARYVETLVK 271
+A + + YP+ + + VE + K
Sbjct: 234 KKEERMRDAIDEYYAFKNEYPESKYIKEVEAIYK 267
>gi|194333587|ref|YP_002015447.1| tol-pal system protein YbgF [Prosthecochloris aestuarii DSM 271]
gi|194311405|gb|ACF45800.1| tol-pal system protein YbgF [Prosthecochloris aestuarii DSM 271]
Length = 258
Score = 44.4 bits (102), Expect = 0.016, Method: Composition-based stats.
Identities = 33/247 (13%), Positives = 71/247 (28%), Gaps = 5/247 (2%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVY--EKAVLFLKEQNFSKA 76
+ + I +IAVC + G ++ + D V ++ Q E A ++ + Q
Sbjct: 1 MKQRNAIIVGAIAVCTVAGCASKTDLYMVQDDVRQLKQQTNQSGGESAEVYAEVQKLRDE 60
Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
+ + AR++ A + A + + + + VD +
Sbjct: 61 IASLQGTIEEMRYNAAARENAARQATLPSDASGIETLPFPIDGPSSSPETAPTVDPSATM 120
Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA---AKE 193
+ + L + + + Q A +
Sbjct: 121 ADSATVRGGDAPVTAGSRDDRALFDAGMNAFNEYDYAEARKEFSALLSAYPQSALADDAQ 180
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
Y Y AI +QLV+ Y + + A + ++ + A +
Sbjct: 181 YYTAETYYNEKWYEKAILEYQLVIEKYPEGDKRPAAYFKQGLSFENIGDATNAGVRYKEL 240
Query: 254 QERYPQG 260
+ YP
Sbjct: 241 IQLYPDS 247
Score = 39.4 bits (89), Expect = 0.58, Method: Composition-based stats.
Identities = 16/74 (21%), Positives = 28/74 (37%)
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+ G +Y A F +L+ Y + A++A E Y ++A L+
Sbjct: 144 FDAGMNAFNEYDYAEARKEFSALLSAYPQSALADDAQYYTAETYYNEKWYEKAILEYQLV 203
Query: 254 QERYPQGYWARYVE 267
E+YP+G
Sbjct: 204 IEKYPEGDKRPAAY 217
>gi|291238883|ref|XP_002739355.1| PREDICTED: ribosomal protein L31-like, partial [Saccoglossus
kowalevskii]
Length = 2618
Score = 44.4 bits (102), Expect = 0.016, Method: Composition-based stats.
Identities = 19/213 (8%), Positives = 48/213 (22%), Gaps = 17/213 (7%)
Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
+ + + + +++ + +++ A + F + P R +L +
Sbjct: 1752 EENALKVLINRGLMYFERKDYKNALQDFYNAVKVEPNDPKIRHTLGLCFHKHDYETAIHT 1811
Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
+ + A + D Y + +
Sbjct: 1812 DPLCLPARVNLGYNLQVTGKFQQAWNHFTACLQIDPDYKPALEGRSIVCLQM-------- 1863
Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE---- 228
A + RG + + +Y A +E
Sbjct: 1864 -----RDTAAAFQDMNTAIQISPSAEMLTNRGVIHQFMGDRTNAVKDYQAAIKLDETYSL 1918
Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
A Y +A++ E P+
Sbjct: 1919 AYFNAANLYFHTRQFRQAKDYYQKAFENNPRDE 1951
>gi|218439843|ref|YP_002378172.1| hypothetical protein PCC7424_2899 [Cyanothece sp. PCC 7424]
gi|218172571|gb|ACK71304.1| TPR repeat-containing protein [Cyanothece sp. PCC 7424]
Length = 269
Score = 44.4 bits (102), Expect = 0.016, Method: Composition-based stats.
Identities = 30/236 (12%), Positives = 62/236 (26%), Gaps = 38/236 (16%)
Query: 27 FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQ----REVYEKAVLFLKEQNFSKAYEYFNQ 82
S+ L+G S ++ T Q + +KA+ NF++A Y++Q
Sbjct: 5 LISLITVVLIGCTALPSWAEPVNPPTLTEEQISQGEALAQKALEATDRGNFAEAEIYWSQ 64
Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
FP + + + + + +
Sbjct: 65 LIEQFPTNPAVWSNRGNC--------------RVSQYKLDEAIADFDKAIELAPHTPDPY 110
Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
Q ++ +R++ + Y G Q E +
Sbjct: 111 LNRGTAFEAQGRYDAAIEDYNRVLSLDP-----EDPMAYNNRGNAQGGLGNWEEALADYQ 165
Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
+ +A F A A + A + +EA + + +YP
Sbjct: 166 KATEIAPNFAF---------------AQANVALALYEMGNKEEATRKMRNLVRKYP 206
>gi|126728388|ref|ZP_01744204.1| hypothetical protein SSE37_20397 [Sagittula stellata E-37]
gi|126711353|gb|EBA10403.1| hypothetical protein SSE37_20397 [Sagittula stellata E-37]
Length = 266
Score = 44.4 bits (102), Expect = 0.016, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 27/59 (45%)
Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
+G+ A R+ + + D + A EA+ RL E L + EA ++ + RYP
Sbjct: 191 QGDTREAARRYLDAYSRFPDDQVAPEALWRLGETLGKLGSVSEACVTLAEVGNRYPGSE 249
>gi|148359616|ref|YP_001250823.1| outer membrane protein [Legionella pneumophila str. Corby]
gi|296107658|ref|YP_003619359.1| outer membrane protein [Legionella pneumophila 2300/99 Alcoy]
gi|148281389|gb|ABQ55477.1| outer membrane protein [Legionella pneumophila str. Corby]
gi|295649560|gb|ADG25407.1| outer membrane protein [Legionella pneumophila 2300/99 Alcoy]
Length = 322
Score = 44.4 bits (102), Expect = 0.016, Method: Composition-based stats.
Identities = 22/105 (20%), Positives = 41/105 (39%)
Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
+RY + A E +G YL + +Y AI F++VL Y + A
Sbjct: 213 KRYDEAIKSMQIFVQKYPRGGYTANAEYWLGELYLVKKDYSKAIEHFEIVLQQYPSSSKA 272
Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
++ + AY EA++ + + YP A+ + ++
Sbjct: 273 AASLLKSGYAYAEKGDKQEAKKRFQQVVKTYPDTPTAQLASSKLE 317
Score = 38.2 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 30/75 (40%), Gaps = 2/75 (2%)
Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
+K Y AI Q+ + Y + A L E Y+ +A E ++ ++
Sbjct: 206 AYELVKNKRYDEAIKSMQIFVQKYPRGGYTANAEYWLGELYLVKKDYSKAIEHFEIVLQQ 265
Query: 257 YPQGYWARYVETLVK 271
YP ++ +L+K
Sbjct: 266 YPSS--SKAAASLLK 278
>gi|119896706|ref|YP_931919.1| hypothetical protein azo0415 [Azoarcus sp. BH72]
gi|119669119|emb|CAL93032.1| conserved hypothetical secreted protein [Azoarcus sp. BH72]
Length = 239
Score = 44.4 bits (102), Expect = 0.016, Method: Composition-based stats.
Identities = 22/116 (18%), Positives = 40/116 (34%), Gaps = 14/116 (12%)
Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
+ L + R+ + A F+ G L+ E +A F
Sbjct: 135 HRDALTAFEAFLARHPAGSFAPSAHFWA--------------GNAALQAKEVASATTHFN 180
Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
VL + + A +AM L + A+ A+ + + ERYP A+ + +
Sbjct: 181 AVLGKWPNDSVAPDAMLGLANSQQAMGDAKTAQRTLQSLVERYPSSNAAQAAKQRL 236
>gi|238797962|ref|ZP_04641452.1| Type IV pilus bioproteinsis/stability protein PilW [Yersinia
mollaretii ATCC 43969]
gi|238718167|gb|EEQ09993.1| Type IV pilus bioproteinsis/stability protein PilW [Yersinia
mollaretii ATCC 43969]
Length = 249
Score = 44.4 bits (102), Expect = 0.016, Method: Composition-based stats.
Identities = 27/252 (10%), Positives = 65/252 (25%), Gaps = 17/252 (6%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
K + L G S D + + ++ + +L + + + A +
Sbjct: 1 MKLTRLWRVCLLATVLTGCSGSSPEKN--DQPAAGQTRLQL---GLEYLAQGDLNAARQN 55
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
+ P A+ + Y + +A+ N +
Sbjct: 56 LEKAVEADPQDYRAQLGM-----AFYEQRIGENSAAEQRYQHAMKLAPGNGTVLNNYGAF 110
Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN------QLAAKE 193
+ Q + +L ++ + N+ Y R + +
Sbjct: 111 LCSLGQYVSAQQQFSAAALLPDYGQVADSLENAGYCFLRANQNDQARALLSRALKYDPDK 170
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDA-EHAEEAMARLVEAYVALALMDEAREVVSL 252
E +R + QL+L Y + E++ + D +
Sbjct: 171 GEPLLAEAQRHFGEGNRAQAQLLLDVYQHTLPASAESLWLQIRFAALAGRQDSVQRYGKQ 230
Query: 253 IQERYPQGYWAR 264
+ +PQ +
Sbjct: 231 LARSFPQSKQYQ 242
>gi|92113978|ref|YP_573906.1| tetratricopeptide TPR_2 [Chromohalobacter salexigens DSM 3043]
gi|91797068|gb|ABE59207.1| Tetratricopeptide TPR_2 [Chromohalobacter salexigens DSM 3043]
Length = 254
Score = 44.4 bits (102), Expect = 0.016, Method: Composition-based stats.
Identities = 17/82 (20%), Positives = 35/82 (42%)
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
A +G Y + + AA FQ V+ ++ ++ +A+ +L DE+R
Sbjct: 168 RANAHYWLGELYSAQSQLDAAAKSFQTVIDDFPESNKMPDALYKLGLLKARQGHPDESRS 227
Query: 249 VVSLIQERYPQGYWARYVETLV 270
++ ++ YP+ A E +
Sbjct: 228 LLDRVRNDYPESNAASMAEDFL 249
Score = 40.9 bits (93), Expect = 0.19, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 30/79 (37%)
Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
+ ++ E+ AAI F+ + +Y ++ A L E Y A +
Sbjct: 124 QDAQTGDQGRDAYQAAFQKVQAREFDAAIKAFEDFIGDYPNSSLRANAHYWLGELYSAQS 183
Query: 242 LMDEAREVVSLIQERYPQG 260
+D A + + + +P+
Sbjct: 184 QLDAAAKSFQTVIDDFPES 202
>gi|218887175|ref|YP_002436496.1| lipoprotein [Desulfovibrio vulgaris str. 'Miyazaki F']
gi|218758129|gb|ACL09028.1| putative lipoprotein [Desulfovibrio vulgaris str. 'Miyazaki F']
Length = 279
Score = 44.4 bits (102), Expect = 0.017, Method: Composition-based stats.
Identities = 33/268 (12%), Positives = 79/268 (29%), Gaps = 20/268 (7%)
Query: 5 LGRAICIFEAWAYQLYKFALTIFFSIAVC-FLVGWERQSSRDVYLDSVTDVRYQREVYEK 63
LG + ++ + ++ + F + + L G E+ + D D Y +
Sbjct: 4 LGEGVVRRGRTFFKRFSLSVLLSFILVLTVVLAGCEKAAPPDDMAD--ARKAAGERRYGE 61
Query: 64 AVLFLKE--------QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
A L+ + +A++ Q ++D A LL + ++++
Sbjct: 62 AEKLLERYLRLNPEGEERWEAWQRLVQITQDVRGDDKAAMELLEAMYLEFGMDG-----D 116
Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
E + + + + +++ + ++RI
Sbjct: 117 KAREVLVRLGGLLETARRWDRAADVWRKLMEVPDLPGDENARAHRRLARIHASRREFGIA 176
Query: 176 KGARFYVTVGRNQLAAK--EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM--A 231
+ + A + + E+ A + A+ +A+
Sbjct: 177 EDVLQQCLQLKAVEARRAECLYDLADVQMAMEHFARGADLARQILAMPGADKELKALAGF 236
Query: 232 RLVEAYVALALMDEAREVVSLIQERYPQ 259
L +A EA V ++E YP
Sbjct: 237 LLGDALEQQGRNAEALGVFESVRETYPN 264
>gi|54294941|ref|YP_127356.1| hypothetical protein lpl2020 [Legionella pneumophila str. Lens]
gi|53754773|emb|CAH16260.1| hypothetical protein lpl2020 [Legionella pneumophila str. Lens]
Length = 322
Score = 44.4 bits (102), Expect = 0.017, Method: Composition-based stats.
Identities = 22/105 (20%), Positives = 41/105 (39%)
Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
+RY + A E +G YL + +Y AI F++VL Y + A
Sbjct: 213 KRYDEAIKSMQTFVQKYPRGGYTANAEYWLGELYLVKKDYPKAIEHFEIVLQQYPSSSKA 272
Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
++ + AY EA++ + + YP A+ + ++
Sbjct: 273 AASLLKSGYAYAEKGDTQEAKKRFQQVVKTYPDTPTAQLASSKLE 317
Score = 38.2 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 29/75 (38%), Gaps = 2/75 (2%)
Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
+K Y AI Q + Y + A L E Y+ +A E ++ ++
Sbjct: 206 AYELVKNKRYDEAIKSMQTFVQKYPRGGYTANAEYWLGELYLVKKDYPKAIEHFEIVLQQ 265
Query: 257 YPQGYWARYVETLVK 271
YP ++ +L+K
Sbjct: 266 YPSS--SKAAASLLK 278
>gi|307823421|ref|ZP_07653650.1| Tetratricopeptide TPR_2 repeat protein [Methylobacter tundripaludum
SV96]
gi|307735406|gb|EFO06254.1| Tetratricopeptide TPR_2 repeat protein [Methylobacter tundripaludum
SV96]
Length = 581
Score = 44.4 bits (102), Expect = 0.017, Method: Composition-based stats.
Identities = 31/276 (11%), Positives = 81/276 (29%), Gaps = 28/276 (10%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDV------------------RYQREVYE 62
+F I + FL G + + V + +Y
Sbjct: 1 MLIFRLFSVIILVFLNGCASSPEKPSAQEEVVEPVKIAEPKKKTEQSEVKTAIDPDVMYM 60
Query: 63 --KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
A L + ++ A E + + ++ A ++ ++ +++ S + + ++
Sbjct: 61 LMAAELAGQRGQYAIALEGYMEAAKRVSDPRFAERAAKIAMYMRDSNKTDEAISLWLKQD 120
Query: 121 ITQYPESKNVDYVYYLVGMSY---AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
K G + + D + ++ +++R S +
Sbjct: 121 PNNPTARKIAALSALRAGNKQAAVDHLSAVLKTDPAGFEKSALELASVLQRDGKSDFFYE 180
Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
V A + A + Q L D ++A+ +
Sbjct: 181 VLDSVGEKNPDQAVVYFVQSLLAAEMKNNALAEKKVQQALNIQPD---WDKALVFQAQIA 237
Query: 238 VALALMDEAREVVSLIQERYPQGYWARY--VETLVK 271
V +++A+ ++ +YP+ + + L+K
Sbjct: 238 VFSGDLNKAKTLLRNASLKYPENDKFKKLLAQVLIK 273
>gi|90021079|ref|YP_526906.1| hypothetical protein Sde_1432 [Saccharophagus degradans 2-40]
gi|89950679|gb|ABD80694.1| Tetratricopeptide TPR_2 [Saccharophagus degradans 2-40]
Length = 259
Score = 44.4 bits (102), Expect = 0.017, Method: Composition-based stats.
Identities = 23/260 (8%), Positives = 72/260 (27%), Gaps = 11/260 (4%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K + + L ++ +V D + + +L++ + A
Sbjct: 1 MIKHIKVAVIAGLLLVLGACVTTTNEPKSKINVQDALEANV--KLGMTYLQKGDRENALR 58
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQ-------YSAGKYQQAASLGEEYITQYPESKNVD 131
F++ + A + L + + S K + + + + +
Sbjct: 59 AFSKALETDKKSAEANQGLALVHQLNGEVEAAEKSFQKALKGRADFSMAGVELSYGRFLF 118
Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
+ ++ L ++ ++ + A + +LA
Sbjct: 119 EQERYKEAKEHFEMASQDLTFQSRANALYFVGLTSQKIGDEVRALAAFQHALNLNPRLAP 178
Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
+E+ Y +Y +A + S+ ++ + D+
Sbjct: 179 AAIELAEYSFAERDYASAKKYLDQFVR--SNNRQTPRSLWLGIRIERIFGNKDKEASYAL 236
Query: 252 LIQERYPQGYWARYVETLVK 271
++ +P + L++
Sbjct: 237 ALKNMHPYSKEYLEYKNLIE 256
>gi|320104419|ref|YP_004180010.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal
allergen [Isosphaera pallida ATCC 43644]
gi|319751701|gb|ADV63461.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal
allergen [Isosphaera pallida ATCC 43644]
Length = 688
Score = 44.4 bits (102), Expect = 0.017, Method: Composition-based stats.
Identities = 12/60 (20%), Positives = 25/60 (41%)
Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+ +A Y + A EA+ +L A +A+ + +R+P+ R + +K
Sbjct: 470 DLEAFVAAYPQSAEAPEALLQLANVNEFNADEAKAKSYYQTLAKRFPESGPGRKAQGALK 529
>gi|258545518|ref|ZP_05705752.1| conserved hypothetical protein [Cardiobacterium hominis ATCC 15826]
gi|258519218|gb|EEV88077.1| conserved hypothetical protein [Cardiobacterium hominis ATCC 15826]
Length = 261
Score = 44.4 bits (102), Expect = 0.017, Method: Composition-based stats.
Identities = 26/259 (10%), Positives = 62/259 (23%), Gaps = 15/259 (5%)
Query: 19 LYKFALTIFFSIAVCFLVGWER---------QSSRDVYLDSVTDVRYQREVY-EKAVLFL 68
+ + + A L G + + D + Y E +L
Sbjct: 1 MKMKKFPLLCAAATVLLGGCSTFGFGGSNNDDDNVPTVVKKKADYGQAYKDYVELGAQYL 60
Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY---P 125
+ + A + A L + + Q +Y
Sbjct: 61 QMGRYDLAEPKLQRAIEIDSHPPEAWNILAVLYEEKRDIASGNQVYQKLIHSHPEYLLGY 120
Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
+ + ++ + K + + +
Sbjct: 121 TNYATFLCKFDRDSEMQTLLGQMRGRNAEFKAAAGIAEGNCMQRRGQSGTAENAYKQALA 180
Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
N A + + A+ R+ V+ Y ++ E++ +EA
Sbjct: 181 ANPQAEGALLPLAQISLQKGDYASALRYLRVVHTYVG--YSPESVKLGIEAARKSGDTRM 238
Query: 246 AREVVSLIQERYPQGYWAR 264
E+V +++ Y A+
Sbjct: 239 EEELVRVMRGNYKSTPEAK 257
>gi|56476930|ref|YP_158519.1| hypothetical protein ebA2654 [Aromatoleum aromaticum EbN1]
gi|56312973|emb|CAI07618.1| hypothetical protein ebA2654 [Aromatoleum aromaticum EbN1]
Length = 246
Score = 44.4 bits (102), Expect = 0.017, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 43/117 (36%), Gaps = 14/117 (11%)
Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213
K L + + ++ S ++ GA F+ G L+ E AA F
Sbjct: 140 RYKDALTGFEQFIRQHPQSTFLPGAHFWA--------------GNAALQAKEVAAASTYF 185
Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
VL + A +AM L + AL ++E + + ER+P A+ +
Sbjct: 186 NTVLKTWPQDAAAPDAMLGLANSQQALGDTKTSQETLKKLVERFPDSSAAQAARQRL 242
Score = 36.7 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 14/74 (18%), Positives = 25/74 (33%)
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
YE A+ LKE + A F Q R P + + + A + A++
Sbjct: 129 YEAALNLLKEGRYKDALTGFEQFIRQHPQSTFLPGAHFWAGNAALQAKEVAAASTYFNTV 188
Query: 121 ITQYPESKNVDYVY 134
+ +P+
Sbjct: 189 LKTWPQDAAAPDAM 202
>gi|298206626|ref|YP_003714805.1| TPR-domain containing protein [Croceibacter atlanticus HTCC2559]
gi|83849256|gb|EAP87124.1| TPR-domain containing protein [Croceibacter atlanticus HTCC2559]
Length = 1006
Score = 44.4 bits (102), Expect = 0.017, Method: Composition-based stats.
Identities = 31/237 (13%), Positives = 68/237 (28%), Gaps = 15/237 (6%)
Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
+ D V YQ+ + + + E N+++A YF + + A ++ +A
Sbjct: 413 ESSRDFDNKVAYQKVAFYRGIELYNEDNYTEAKTYFEKSLSEPRDASFTARATYWNAETD 472
Query: 105 YSAGKYQQAASLGEEYI--------------TQYPESKNVDYVYYLVGMSYAQMIRDVPY 150
Y+ +Q A +E+ Y +SY + +
Sbjct: 473 YNLNNFQDALIGYKEFQGMSAASQTEAYKNLDYNLGYAYFKQKDYEQAISYFKKYSETSS 532
Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR-GEYVAA 209
D K + + + + A +
Sbjct: 533 DTSRKKDAFLRLGDTYFVTSKYWPAMESYNDAIALGGKSADYAAFQKAISYGFVNKNDRK 592
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
I L +S + + ++A+ L YVA+ E + + + P+ +
Sbjct: 593 IEDLTSFLNQFSRSTYRDDALYELGNTYVAIGNTQEGIKAYNRLIRDVPKSSYVSKA 649
Score = 42.1 bits (96), Expect = 0.086, Method: Composition-based stats.
Identities = 27/206 (13%), Positives = 65/206 (31%), Gaps = 24/206 (11%)
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
Y + K++++ +A YF + S + + L + KY A +
Sbjct: 505 YNLGYAYFKQKDYEQAISYFKKYSETSSDTSRKKDAFLRLGDTYFVTSKYWPAMESYNDA 564
Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
I +S + + + ++ ++ + +++ S Y A +
Sbjct: 565 IALGGKSADYAAFQKAISYGFVNKNDRK----------IEDLTSFLNQFSRSTYRDDALY 614
Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
E+G Y+ G I + ++ + + + +A+ + Y
Sbjct: 615 --------------ELGNTYVAIGNTQEGIKAYNRLIRDVPKSSYVSKALLKQGLIYYNS 660
Query: 241 ALMDEAREVVSLIQERYPQGYWARYV 266
+EA E + +P A
Sbjct: 661 DRGNEALEKFKKVAADFPGTAQADQA 686
>gi|83718568|ref|YP_441917.1| hypothetical protein BTH_I1371 [Burkholderia thailandensis E264]
gi|167580761|ref|ZP_02373635.1| hypothetical protein BthaT_21578 [Burkholderia thailandensis TXDOH]
gi|167618864|ref|ZP_02387495.1| hypothetical protein BthaB_21312 [Burkholderia thailandensis Bt4]
gi|257138088|ref|ZP_05586350.1| hypothetical protein BthaA_02539 [Burkholderia thailandensis E264]
gi|83652393|gb|ABC36456.1| conserved hypothetical protein [Burkholderia thailandensis E264]
Length = 249
Score = 44.4 bits (102), Expect = 0.017, Method: Composition-based stats.
Identities = 18/111 (16%), Positives = 31/111 (27%)
Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
+ +Y + + R K V + G + A F+
Sbjct: 94 RQQKEYYTDLDTRLKKFEPQKTTVDGVEGTVQPGETDAFNAASQQFRNGNFKGAAASFRA 153
Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
+A Y + + A L A AL + + + YPQ A
Sbjct: 154 FIAKYPQSPYQPTAQYWLGNAQYALRDYKGSTATWQGLVKNYPQHPRAADA 204
Score = 42.1 bits (96), Expect = 0.075, Method: Composition-based stats.
Identities = 16/123 (13%), Positives = 41/123 (33%), Gaps = 14/123 (11%)
Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
+ K + +Y SPY A++++ G +Y
Sbjct: 137 QQFRNGNFKGAAASFRAFIAKYPQSPYQPTAQYWL--------------GNAQYALRDYK 182
Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
+ +Q ++ NY A +A+ + + A++ + + ++P A +
Sbjct: 183 GSTATWQGLVKNYPQHPRAADALIAIGTNQLEQGQKAAAKKTLEQVVSQFPGSNAAETAQ 242
Query: 268 TLV 270
+ +
Sbjct: 243 SKL 245
>gi|256829994|ref|YP_003158722.1| PEP-CTERM system TPR-repeat lipoprotein [Desulfomicrobium baculatum
DSM 4028]
gi|256579170|gb|ACU90306.1| PEP-CTERM system TPR-repeat lipoprotein [Desulfomicrobium baculatum
DSM 4028]
Length = 884
Score = 44.4 bits (102), Expect = 0.017, Method: Composition-based stats.
Identities = 21/265 (7%), Positives = 61/265 (23%), Gaps = 26/265 (9%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLD--------------------SVTDVRYQR 58
+ + + + L G + +S + + D +
Sbjct: 1 MIRCTVFAVALMLCVALAGCKGHTSESLNAEGEALFKQGNYNGAIVHYKNALEKDPNFVA 60
Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
Y + +++ +A F + P+ G L A Q
Sbjct: 61 ARYNLGLAYIETGKMDQAEREFQKVLLQNPYDGRVNFQLGRIANFQNKPAVAVPLIMAYL 120
Query: 119 EYI---TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
+ E + S + + + +I +
Sbjct: 121 QEHPDDAAALEQLAISATISGDPASAKGHLEKALAVEPDRISAKLGLVQIFMIQGDRAEA 180
Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
+ + + + + + + + A + + + + Y A +
Sbjct: 181 RKMLDKLLAQDPENRSGLHALAQLEAQEKDPEAMLDAYSRISSIYPSDLF---ARYKQGS 237
Query: 236 AYVALALMDEAREVVSLIQERYPQG 260
+ ++ R + YP
Sbjct: 238 LLMNKGEGEKVRVSAEAMLSEYPDS 262
>gi|150005556|ref|YP_001300300.1| hypothetical protein BVU_3041 [Bacteroides vulgatus ATCC 8482]
gi|212693420|ref|ZP_03301548.1| hypothetical protein BACDOR_02936 [Bacteroides dorei DSM 17855]
gi|237710477|ref|ZP_04540958.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|237726984|ref|ZP_04557465.1| lipoprotein [Bacteroides sp. D4]
gi|319640778|ref|ZP_07995491.1| hypothetical protein HMPREF9011_01088 [Bacteroides sp. 3_1_40A]
gi|149933980|gb|ABR40678.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482]
gi|212664064|gb|EEB24638.1| hypothetical protein BACDOR_02936 [Bacteroides dorei DSM 17855]
gi|229433840|gb|EEO43917.1| lipoprotein [Bacteroides dorei 5_1_36/D4]
gi|229455199|gb|EEO60920.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|317387590|gb|EFV68456.1| hypothetical protein HMPREF9011_01088 [Bacteroides sp. 3_1_40A]
Length = 278
Score = 44.4 bits (102), Expect = 0.017, Method: Composition-based stats.
Identities = 44/274 (16%), Positives = 85/274 (31%), Gaps = 30/274 (10%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
I ++ L + D YE A + + +KA
Sbjct: 1 MKKYIIIALVSGTVLTSCGEYNKVLKSTDYEYK-------YEAAKSYFGKGQNTKAATIL 53
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
+ A +SL M Y+ G + A+ Y YP + Y G +
Sbjct: 54 EELITIMKGTDKAEESLYMLGMTYYNQGDFITASHYFTTYYNTYPRGVYTEQARYFSGKA 113
Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV------ 194
+ DQ +T +Q + +E + S + A+ + +++L K+
Sbjct: 114 LFLDTPEPRLDQSSTYKAIQELQMFMEYFPTSSRRQDAQQMIFDLQDKLVMKDYLAAKLY 173
Query: 195 -------EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL----- 242
Y Y++ I Q L +Y + E+ ++ A +A
Sbjct: 174 YDLGSYTGNSTYSTTGNNYLSCIVTAQNALKDYPYTKMREDLSILVLRAKYDMAKASVEE 233
Query: 243 -----MDEAREVVSLIQERYPQGYWARYVETLVK 271
M E + + +P + + VE++ K
Sbjct: 234 KKEERMRETIDEYYSFKNEFPDSKYTKEVESIYK 267
>gi|94269907|ref|ZP_01291596.1| Tetratricopeptide TPR_4 [delta proteobacterium MLMS-1]
gi|93451021|gb|EAT01988.1| Tetratricopeptide TPR_4 [delta proteobacterium MLMS-1]
Length = 609
Score = 44.4 bits (102), Expect = 0.018, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 27/79 (34%)
Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
AA+ + ++ ++ Y D+ E+A L A+ + + EA
Sbjct: 1 WQAAELRRQLAAKEENPDWQRVRNLYRRYTVEYPDSHRREQAYLELGLAHFQMRFLREAL 60
Query: 248 EVVSLIQERYPQGYWARYV 266
L ++RYP
Sbjct: 61 TYFRLFEQRYPDSPLLPRA 79
>gi|54297970|ref|YP_124339.1| hypothetical protein lpp2025 [Legionella pneumophila str. Paris]
gi|53751755|emb|CAH13177.1| hypothetical protein lpp2025 [Legionella pneumophila str. Paris]
Length = 322
Score = 44.4 bits (102), Expect = 0.018, Method: Composition-based stats.
Identities = 22/105 (20%), Positives = 41/105 (39%)
Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
+RY + A E +G YL + +Y AI F++VL Y + A
Sbjct: 213 KRYDEAIKSMQIFVQKYPRGGYTANAEYWLGELYLVKKDYSKAIEHFEIVLQQYPSSSKA 272
Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
++ + AY EA++ + + YP A+ + ++
Sbjct: 273 AASLLKSGYAYAEKGDKQEAKKRFQQVVKTYPDTPTAQLASSKLE 317
Score = 38.2 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 30/75 (40%), Gaps = 2/75 (2%)
Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
+K Y AI Q+ + Y + A L E Y+ +A E ++ ++
Sbjct: 206 AYELVKNKRYDEAIKSMQIFVQKYPRGGYTANAEYWLGELYLVKKDYSKAIEHFEIVLQQ 265
Query: 257 YPQGYWARYVETLVK 271
YP ++ +L+K
Sbjct: 266 YPSS--SKAAASLLK 278
>gi|307728549|ref|YP_003905773.1| tol-pal system protein YbgF [Burkholderia sp. CCGE1003]
gi|307583084|gb|ADN56482.1| tol-pal system protein YbgF [Burkholderia sp. CCGE1003]
Length = 249
Score = 44.4 bits (102), Expect = 0.018, Method: Composition-based stats.
Identities = 19/123 (15%), Positives = 42/123 (34%), Gaps = 14/123 (11%)
Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
+ K + ++ NSPY A++++ G +Y
Sbjct: 137 QQFRNGDFKSAAASFRSFIAKFPNSPYQPTAQYWL--------------GNAQYALRDYK 182
Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
+ +Q V+ NY A EA+ + + A++ + I +Y A+ +
Sbjct: 183 GSTATWQGVVKNYPQHPRAPEALLAIANNQIEQGQKAAAKKTLEQIVAQYGGSNVAQSAQ 242
Query: 268 TLV 270
+ +
Sbjct: 243 SKL 245
Score = 41.7 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 21/142 (14%), Positives = 40/142 (28%)
Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184
+S +D + V Q K Y + + R + V
Sbjct: 63 DQSNRLDQLNQQVATLRGQNEDMGNQLATLQKQQKDYYTDLDTRLKKFEPQQQTVDGVQG 122
Query: 185 GRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244
+ G++ +A F+ +A + ++ + A L A AL
Sbjct: 123 EVQPGETDAFNAASQQFRNGDFKSAAASFRSFIAKFPNSPYQPTAQYWLGNAQYALRDYK 182
Query: 245 EAREVVSLIQERYPQGYWARYV 266
+ + + YPQ A
Sbjct: 183 GSTATWQGVVKNYPQHPRAPEA 204
>gi|224826142|ref|ZP_03699245.1| tol-pal system protein YbgF [Lutiella nitroferrum 2002]
gi|224601779|gb|EEG07959.1| tol-pal system protein YbgF [Lutiella nitroferrum 2002]
Length = 258
Score = 44.4 bits (102), Expect = 0.018, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 32/79 (40%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+G + + +Y AAI + + + A +A+ + L +D A+ +
Sbjct: 178 MYWLGVAHAAQRQYDAAIDIHRRFVERNPNHPKAPDALRNIANCQRDLGQVDVAKATLHR 237
Query: 253 IQERYPQGYWARYVETLVK 271
+ + YP+ A + +K
Sbjct: 238 LIKLYPKSAAAVKAKEQLK 256
>gi|126668391|ref|ZP_01739348.1| hypothetical protein MELB17_14658 [Marinobacter sp. ELB17]
gi|126627100|gb|EAZ97740.1| hypothetical protein MELB17_14658 [Marinobacter sp. ELB17]
Length = 258
Score = 44.4 bits (102), Expect = 0.018, Method: Composition-based stats.
Identities = 27/212 (12%), Positives = 60/212 (28%), Gaps = 10/212 (4%)
Query: 69 KEQNFSKAYEYFNQCSR-----DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
+ N + E F + V + L+ Q +Y +
Sbjct: 40 QAGNNQASAELFYMLQQLQGDVRRLQGEVEEQRHLVDRLEQQGRDRYIDLDQRILKLTAA 99
Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
+++ ++ Y Q + + Y S + Y +
Sbjct: 100 QQQAQAAASAAPAPATPAPASVQAKDYRQPSAEESKAYNSIVDLIRNQKKYDQAITQIYE 159
Query: 184 VGRNQLA-----AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
+G YL + + A F +V ++D A ++ +L
Sbjct: 160 FLDTYPEGDLTVNAYYWLGEVYLVKPQLEQAKQAFSIVATRFADHRKAADSTYKLGVTLD 219
Query: 239 ALALMDEAREVVSLIQERYPQGYWARYVETLV 270
L +EA + + + YP A+ ++ +
Sbjct: 220 RLGEKEEAGRRMQTVVKNYPDSSAAKLAQSYL 251
>gi|53720376|ref|YP_109362.1| hypothetical protein BPSL2766 [Burkholderia pseudomallei K96243]
gi|67643928|ref|ZP_00442671.1| tol-pal system protein YbgF [Burkholderia mallei GB8 horse 4]
gi|76809959|ref|YP_334630.1| TPR repeat-containing protein [Burkholderia pseudomallei 1710b]
gi|121598217|ref|YP_992165.1| hypothetical protein BMASAVP1_A0825 [Burkholderia mallei SAVP1]
gi|124384460|ref|YP_001028611.1| hypothetical protein BMA10229_A2659 [Burkholderia mallei NCTC
10229]
gi|126439148|ref|YP_001060217.1| tol-pal system protein YbgF [Burkholderia pseudomallei 668]
gi|126449408|ref|YP_001081488.1| tol-pal system protein YbgF [Burkholderia mallei NCTC 10247]
gi|126455302|ref|YP_001067481.1| tol-pal system protein YbgF [Burkholderia pseudomallei 1106a]
gi|134280274|ref|ZP_01766985.1| tol-pal system protein YbgF [Burkholderia pseudomallei 305]
gi|166998278|ref|ZP_02264138.1| tol-pal system protein YbgF [Burkholderia mallei PRL-20]
gi|167720992|ref|ZP_02404228.1| tol-pal system protein YbgF [Burkholderia pseudomallei DM98]
gi|167739949|ref|ZP_02412723.1| tol-pal system protein YbgF [Burkholderia pseudomallei 14]
gi|167817186|ref|ZP_02448866.1| tol-pal system protein YbgF [Burkholderia pseudomallei 91]
gi|167825599|ref|ZP_02457070.1| tol-pal system protein YbgF [Burkholderia pseudomallei 9]
gi|167847083|ref|ZP_02472591.1| tol-pal system protein YbgF [Burkholderia pseudomallei B7210]
gi|167895667|ref|ZP_02483069.1| tol-pal system protein YbgF [Burkholderia pseudomallei 7894]
gi|167904060|ref|ZP_02491265.1| tol-pal system protein YbgF [Burkholderia pseudomallei NCTC 13177]
gi|167912317|ref|ZP_02499408.1| tol-pal system protein YbgF [Burkholderia pseudomallei 112]
gi|167920274|ref|ZP_02507365.1| tol-pal system protein YbgF [Burkholderia pseudomallei BCC215]
gi|217420754|ref|ZP_03452259.1| tol-pal system protein YbgF [Burkholderia pseudomallei 576]
gi|226194262|ref|ZP_03789861.1| tol-pal system protein YbgF [Burkholderia pseudomallei Pakistan 9]
gi|237813607|ref|YP_002898058.1| tol-pal system protein YbgF [Burkholderia pseudomallei MSHR346]
gi|242316228|ref|ZP_04815244.1| tol-pal system protein YbgF [Burkholderia pseudomallei 1106b]
gi|254175753|ref|ZP_04882413.1| conserved hypothetical protein [Burkholderia mallei ATCC 10399]
gi|254180822|ref|ZP_04887420.1| tol-pal system protein YbgF [Burkholderia pseudomallei 1655]
gi|254191660|ref|ZP_04898163.1| tol-pal system protein YbgF [Burkholderia pseudomallei Pasteur
52237]
gi|254194894|ref|ZP_04901324.1| tol-pal system protein YbgF [Burkholderia pseudomallei S13]
gi|254202359|ref|ZP_04908722.1| tol-pal system protein YbgF [Burkholderia mallei FMH]
gi|254207693|ref|ZP_04914043.1| tol-pal system protein YbgF [Burkholderia mallei JHU]
gi|254258392|ref|ZP_04949446.1| tol-pal system protein YbgF [Burkholderia pseudomallei 1710a]
gi|254299067|ref|ZP_04966517.1| tol-pal system protein YbgF [Burkholderia pseudomallei 406e]
gi|254356405|ref|ZP_04972681.1| tol-pal system protein YbgF [Burkholderia mallei 2002721280]
gi|52210790|emb|CAH36774.1| putative exported protein [Burkholderia pseudomallei K96243]
gi|76579412|gb|ABA48887.1| TPR repeat [Burkholderia pseudomallei 1710b]
gi|121227027|gb|ABM49545.1| conserved hypothetical protein [Burkholderia mallei SAVP1]
gi|124292480|gb|ABN01749.1| conserved hypothetical protein [Burkholderia mallei NCTC 10229]
gi|126218641|gb|ABN82147.1| tol-pal system protein YbgF [Burkholderia pseudomallei 668]
gi|126228944|gb|ABN92484.1| tol-pal system protein YbgF [Burkholderia pseudomallei 1106a]
gi|126242278|gb|ABO05371.1| tol-pal system protein YbgF [Burkholderia mallei NCTC 10247]
gi|134248281|gb|EBA48364.1| tol-pal system protein YbgF [Burkholderia pseudomallei 305]
gi|147746606|gb|EDK53683.1| tol-pal system protein YbgF [Burkholderia mallei FMH]
gi|147751587|gb|EDK58654.1| tol-pal system protein YbgF [Burkholderia mallei JHU]
gi|148025402|gb|EDK83556.1| tol-pal system protein YbgF [Burkholderia mallei 2002721280]
gi|157809264|gb|EDO86434.1| tol-pal system protein YbgF [Burkholderia pseudomallei 406e]
gi|157939331|gb|EDO95001.1| tol-pal system protein YbgF [Burkholderia pseudomallei Pasteur
52237]
gi|160696797|gb|EDP86767.1| conserved hypothetical protein [Burkholderia mallei ATCC 10399]
gi|169651643|gb|EDS84336.1| tol-pal system protein YbgF [Burkholderia pseudomallei S13]
gi|184211361|gb|EDU08404.1| tol-pal system protein YbgF [Burkholderia pseudomallei 1655]
gi|217396166|gb|EEC36183.1| tol-pal system protein YbgF [Burkholderia pseudomallei 576]
gi|225933727|gb|EEH29715.1| tol-pal system protein YbgF [Burkholderia pseudomallei Pakistan 9]
gi|237502979|gb|ACQ95297.1| tol-pal system protein YbgF [Burkholderia pseudomallei MSHR346]
gi|238525397|gb|EEP88825.1| tol-pal system protein YbgF [Burkholderia mallei GB8 horse 4]
gi|242139467|gb|EES25869.1| tol-pal system protein YbgF [Burkholderia pseudomallei 1106b]
gi|243065358|gb|EES47544.1| tol-pal system protein YbgF [Burkholderia mallei PRL-20]
gi|254217081|gb|EET06465.1| tol-pal system protein YbgF [Burkholderia pseudomallei 1710a]
Length = 249
Score = 44.4 bits (102), Expect = 0.018, Method: Composition-based stats.
Identities = 18/111 (16%), Positives = 31/111 (27%)
Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
+ +Y + + R K V + G + A F+
Sbjct: 94 RQQKEYYTDLDTRLKKFEPQKTTVDGVEGTVQPGETDAFNAASQQFRNGNFKGAAASFRA 153
Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
+A Y + + A L A AL + + + YPQ A
Sbjct: 154 FIAKYPQSPYQPTAQYWLGNAQYALRDYKGSTATWQGLVKNYPQHPRAADA 204
Score = 42.1 bits (96), Expect = 0.078, Method: Composition-based stats.
Identities = 16/123 (13%), Positives = 40/123 (32%), Gaps = 14/123 (11%)
Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
+ K + +Y SPY A++++ G +Y
Sbjct: 137 QQFRNGNFKGAAASFRAFIAKYPQSPYQPTAQYWL--------------GNAQYALRDYK 182
Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
+ +Q ++ NY A +A+ + + A++ + ++P A +
Sbjct: 183 GSTATWQGLVKNYPQHPRAADALIAIGTNQLEQGQKAAAKKTFEQVVSQFPGSNAAETAQ 242
Query: 268 TLV 270
+ +
Sbjct: 243 SKL 245
>gi|329295950|ref|ZP_08253286.1| tol-pal system protein YbgF [Plautia stali symbiont]
Length = 205
Score = 44.4 bits (102), Expect = 0.018, Method: Composition-based stats.
Identities = 14/70 (20%), Positives = 29/70 (41%), Gaps = 2/70 (2%)
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
++ +Y +I Q + Y D+ + A L + + D+A + + + YP+
Sbjct: 97 EKKQYDQSITALQAWVKKYPDSTYQPNANYWLGQLFYNKGKKDDAAYYFATVVKNYPKSP 156
Query: 262 WARYVETLVK 271
+ E L K
Sbjct: 157 --KAAEALFK 164
Score = 43.6 bits (100), Expect = 0.026, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 33/87 (37%)
Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243
+G+ + +G+ A F V+ NY + A EA+ ++
Sbjct: 116 PDSTYQPNANYWLGQLFYNKGKKDDAAYYFATVVKNYPKSPKAAEALFKVGVIMQEKNDT 175
Query: 244 DEAREVVSLIQERYPQGYWARYVETLV 270
+A+ V + +++P A+ + +
Sbjct: 176 AKAKAVYQQVIKQFPNSESAKQAQKRL 202
>gi|322418094|ref|YP_004197317.1| hypothetical protein GM18_0560 [Geobacter sp. M18]
gi|320124481|gb|ADW12041.1| hypothetical protein GM18_0560 [Geobacter sp. M18]
Length = 186
Score = 44.4 bits (102), Expect = 0.018, Method: Composition-based stats.
Identities = 12/64 (18%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA-REVVSLIQERYPQGYWA 263
++ A+ +F +L + A EA+ A + + A +E+ + +YP+ W
Sbjct: 118 QFSEAVIQFNTLLNGCPRSYAAPEALYLRGVARYKSSRDNSALKEIYQQLAAQYPESEWT 177
Query: 264 RYVE 267
+ +
Sbjct: 178 QKAQ 181
>gi|302038648|ref|YP_003798970.1| putative tol-Pal system protein YbgF [Candidatus Nitrospira
defluvii]
gi|300606712|emb|CBK43045.1| putative Tol-Pal system protein YbgF (modular protein) [Candidatus
Nitrospira defluvii]
Length = 558
Score = 44.4 bits (102), Expect = 0.019, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 33/89 (37%)
Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
+ +G Y + ++ AI + V N+ +E A+ + AY+AL
Sbjct: 463 QHPHSDLAPNARFWLGESYYGKKDFSRAIDAYDQVQLNHPASEKVPAALLKKGYAYLALK 522
Query: 242 LMDEAREVVSLIQERYPQGYWARYVETLV 270
+A + + + YP+ A +
Sbjct: 523 DRKKAASALKQVIDLYPKSPEANKAMDKL 551
Score = 41.7 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 26/78 (33%), Gaps = 2/78 (2%)
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
E K G+ A F L + ++ A A L E+Y A + +
Sbjct: 438 YERTLTRFKDGDLDGARQGFAEFLLQHPHSDLAPNARFWLGESYYGKKDFSRAIDAYDQV 497
Query: 254 QERYPQGYWARYVETLVK 271
Q +P + L+K
Sbjct: 498 QLNHPASE--KVPAALLK 513
>gi|294645888|ref|ZP_06723564.1| tetratricopeptide repeat protein [Bacteroides ovatus SD CC 2a]
gi|292638768|gb|EFF57110.1| tetratricopeptide repeat protein [Bacteroides ovatus SD CC 2a]
Length = 383
Score = 44.4 bits (102), Expect = 0.019, Method: Composition-based stats.
Identities = 31/262 (11%), Positives = 69/262 (26%), Gaps = 19/262 (7%)
Query: 19 LYK-FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
+ K I +I ++G+ + + D+ +Y++ +E+N++ A
Sbjct: 1 MKKEITRLICAAICCTPIIGFAQTGDKFTSTDN---------LYKEGKELFQERNYAAAL 51
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
+ P A + + + M Y + L + L
Sbjct: 52 PALKAFVKQKPAASLLQDAEYMLVSSAYELKDKNRIELLRKYLDRYPDTPYANRIYALLA 111
Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSR-----IVERYTNSPYVKGARFYVTVGRNQLAAK 192
+ + D + + + + T R A
Sbjct: 112 SCYFYEGKYDEALALFNSADLDLLGNEERDDCTYQLATCYLKTDNLREAAIWFETLRANS 171
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANY----SDAEHAEEAMARLVEAYVALALMDEARE 248
R+ L + D+++ + E Y L D+A+
Sbjct: 172 PKYAKDCDYYLSYIRYTQKRYSEALKGFLPLQDDSKYKALVPYYIAEIYTQLKNYDKAQI 231
Query: 249 VVSLIQERYPQGYWARYVETLV 270
V YP A + ++
Sbjct: 232 VAQNYLSAYPNNEHAAEMYRIL 253
>gi|317052374|ref|YP_004113490.1| cell wall hydrolase/autolysin [Desulfurispirillum indicum S5]
gi|316947458|gb|ADU66934.1| cell wall hydrolase/autolysin [Desulfurispirillum indicum S5]
Length = 628
Score = 44.4 bits (102), Expect = 0.019, Method: Composition-based stats.
Identities = 23/146 (15%), Positives = 48/146 (32%), Gaps = 8/146 (5%)
Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
N DY + + + + + A +++ +SP A +
Sbjct: 25 NEYNEDYFFGVKSDYERLLRNESTQFRSAWLKVIEGFELFYLNRPDSPLAPEAMYNAGDA 84
Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY-VALALMD 244
+L R K + ++ F+ + Y+D+E A +A + Y +
Sbjct: 85 YFRLY-------RLSSKDYDLEQSLSTFRTLPRRYADSEKAPDAAFQAGRIYEEEKNDIL 137
Query: 245 EAREVVSLIQERYPQGYWARYVETLV 270
A + + ERYP+ A +
Sbjct: 138 LAARLYEQLIERYPRSQAAVDALQRL 163
>gi|114776300|ref|ZP_01451345.1| outer membrane protein [Mariprofundus ferrooxydans PV-1]
gi|114553130|gb|EAU55528.1| outer membrane protein [Mariprofundus ferrooxydans PV-1]
Length = 285
Score = 44.4 bits (102), Expect = 0.019, Method: Composition-based stats.
Identities = 28/262 (10%), Positives = 65/262 (24%), Gaps = 18/262 (6%)
Query: 27 FFSIAVCFLVGWERQSSR---DVYLDSVTDVRYQREVYEKAVLFLKEQNFSK-------- 75
F + + FL + + D + T + + ++ + ++
Sbjct: 12 VFLLCLFFLTACATDNKKASWDQDKPTFTQSIHDIQSEQQRLADFNRLQAAEVASLTTRM 71
Query: 76 -AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
A E NQ + A + + + + +A T+ K
Sbjct: 72 DALEALNQEYQLQQAQIQALSAQIEGLQRKQARKPRSSSAHTPSPAHTRVTTVKKHPAQP 131
Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
D A + S A + E
Sbjct: 132 VAAAPVDVAPPPQPVVDTAAQADAEKNAYTAAYLALKSGRYDEAANGFNKQLDLYPKGEY 191
Query: 195 EIGRYYL------KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
+Y + + A+ F+ V+ +Y + A+ ++ + V A E
Sbjct: 192 SDQAWYWLGETRLAQNDGAKALNAFKYVVDHYPSSVKHAAALFKMAQISVDNKQPARAIE 251
Query: 249 VVSLIQERYPQGYWARYVETLV 270
+ + + A +
Sbjct: 252 YYKRLIQEHADSDMAEQARAAL 273
>gi|53725633|ref|YP_103662.1| hypothetical protein BMA2083 [Burkholderia mallei ATCC 23344]
gi|52429056|gb|AAU49649.1| conserved hypothetical protein [Burkholderia mallei ATCC 23344]
Length = 234
Score = 44.4 bits (102), Expect = 0.019, Method: Composition-based stats.
Identities = 18/111 (16%), Positives = 31/111 (27%)
Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
+ +Y + + R K V + G + A F+
Sbjct: 79 RQQKEYYTDLDTRLKKFEPQKTTVDGVEGTVQPGETDAFNAASQQFRNGNFKGAAASFRA 138
Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
+A Y + + A L A AL + + + YPQ A
Sbjct: 139 FIAKYPQSPYQPTAQYWLGNAQYALRDYKGSTATWQGLVKNYPQHPRAADA 189
Score = 42.1 bits (96), Expect = 0.083, Method: Composition-based stats.
Identities = 16/123 (13%), Positives = 40/123 (32%), Gaps = 14/123 (11%)
Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
+ K + +Y SPY A++++ G +Y
Sbjct: 122 QQFRNGNFKGAAASFRAFIAKYPQSPYQPTAQYWL--------------GNAQYALRDYK 167
Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
+ +Q ++ NY A +A+ + + A++ + ++P A +
Sbjct: 168 GSTATWQGLVKNYPQHPRAADALIAIGTNQLEQGQKAAAKKTFEQVVSQFPGSNAAETAQ 227
Query: 268 TLV 270
+ +
Sbjct: 228 SKL 230
>gi|239832780|ref|ZP_04681109.1| tol-pal system protein YbgF [Ochrobactrum intermedium LMG 3301]
gi|239825047|gb|EEQ96615.1| tol-pal system protein YbgF [Ochrobactrum intermedium LMG 3301]
Length = 550
Score = 44.0 bits (101), Expect = 0.020, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 27/78 (34%), Gaps = 2/78 (2%)
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+ YL G+Y AA F+ + Y EA L E+ EA V
Sbjct: 430 YQASYQYLMSGDYKAAETGFREHVKRYPADPSTAEARFWLGESLYGQGRYSEAATVFIDT 489
Query: 254 QERYPQGYWARYVETLVK 271
Q YP R E + K
Sbjct: 490 QRDYPDSK--RAPENMFK 505
Score = 38.6 bits (87), Expect = 0.96, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 31/93 (33%), Gaps = 5/93 (5%)
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
A +G +G Y A F +Y D++ A E M +L
Sbjct: 452 HVKRYPADPSTAEARFWLGESLYGQGRYSEAATVFIDTQRDYPDSKRAPENMFKLGMTLE 511
Query: 239 ALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+ D A + I ERYP + ++K
Sbjct: 512 KMDNRDVACATFAQIPERYP-----KAAPAILK 539
>gi|217969211|ref|YP_002354445.1| tol-pal system protein YbgF [Thauera sp. MZ1T]
gi|217506538|gb|ACK53549.1| tol-pal system protein YbgF [Thauera sp. MZ1T]
Length = 265
Score = 44.0 bits (101), Expect = 0.020, Method: Composition-based stats.
Identities = 20/103 (19%), Positives = 37/103 (35%)
Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
++ ++ N A G L+ + +A F+ V+ Y A
Sbjct: 160 KHKDAQTAFERFITRYPAGNFTAGAHFWAGNAALQARDVASANRHFKTVMDKYPKENVAP 219
Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
+AM L + A+ A+ + + ERYPQ A+ +
Sbjct: 220 DAMLGLANSQQAMNDAAGAKRTLQSLVERYPQSNAAQVARQRL 262
>gi|153805839|ref|ZP_01958507.1| hypothetical protein BACCAC_00076 [Bacteroides caccae ATCC 43185]
gi|149130516|gb|EDM21722.1| hypothetical protein BACCAC_00076 [Bacteroides caccae ATCC 43185]
Length = 471
Score = 44.0 bits (101), Expect = 0.020, Method: Composition-based stats.
Identities = 23/248 (9%), Positives = 58/248 (23%), Gaps = 21/248 (8%)
Query: 19 LYKFALTIFFSIAVCFLVGW---------ERQSSRDVYLDSVTDVRYQREVYEKAVLFLK 69
+ K+ + F + L + + Y + Y
Sbjct: 1 MKKYLSILAF--SCLTLCSCDNFLDLTPQSVLTPENAYEKPEDWQQTLYAAYGTLQEVF- 57
Query: 70 EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129
++ F V + +A+ Q + + + + E
Sbjct: 58 VGKYTITLTEFG-------TDEVIPFDMGWAAYSQLHYYTFSASHEFLDNHYRLCYEGIK 110
Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
+ +A L Y +V Y P + +
Sbjct: 111 RCNAVIDMPSDAVSADLHNSMIMQARFLRAIYYFDLVRMYGGVPLWTKSSIDRSEIMRPR 170
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
A + + + +A +A+ L Y+ +EA +
Sbjct: 171 ATVDEVYTLITQDMEAALGLPTSWPNAQDKGRATSYAAQAL--LARIYLQWGKPEEALKY 228
Query: 250 VSLIQERY 257
+++ ++
Sbjct: 229 CRMLEGKF 236
>gi|126741355|ref|ZP_01757031.1| Tetratricopeptide TPR_2 [Roseobacter sp. SK209-2-6]
gi|126717560|gb|EBA14286.1| Tetratricopeptide TPR_2 [Roseobacter sp. SK209-2-6]
Length = 831
Score = 44.0 bits (101), Expect = 0.020, Method: Composition-based stats.
Identities = 32/277 (11%), Positives = 71/277 (25%), Gaps = 33/277 (11%)
Query: 6 GRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAV 65
R + A ++K + + + L + + R E Y+ A+
Sbjct: 9 KRRDALIFARIILMFKLKNLLIVMLMMGVLTACKSREER------------AEEYYQSAL 56
Query: 66 LFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI--TQ 123
L+E + +A + AR+ + A + E
Sbjct: 57 ALLEEGDTDRALVELRNVFDNNGLHREARQLYADLVLARGDAQEAYGQYLRLVEQYPDAV 116
Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG------ 177
+ + L + + Q + +
Sbjct: 117 EVRLQLAELALDLGNWEEVKRHGGAAIELAPEVPAHQALEIFIRYQEARQRQDDVAAGEV 176
Query: 178 --ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
+ L+ + ++ E A+P +LA + +A A RL
Sbjct: 177 VREAETLLETHPDLSTALRILVEWHATSPEPARALPYLDQLLAQFPNARSLLMA--RLG- 233
Query: 236 AYVALALMDEAREVVSLIQERYPQG--------YWAR 264
+ +E + I +R+P+ W +
Sbjct: 234 ILQQAGMSEEIGTQLHQIYDRFPEDPVIVDLMIKWYQ 270
>gi|315023899|gb|EFT36901.1| lipoprotein protein, putative [Riemerella anatipestifer RA-YM]
Length = 270
Score = 44.0 bits (101), Expect = 0.020, Method: Composition-based stats.
Identities = 45/222 (20%), Positives = 82/222 (36%), Gaps = 12/222 (5%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
+ A ++ + +A + + A L SA+ Y +Y+ A +++
Sbjct: 11 KTANEMYTKKKWKEALSLYERVQNLISGTDEASDILFKSAYANYYDKQYRIAGHQFKKFS 70
Query: 122 TQYP--ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
+ Y+ + Y Q D DQ+ T+L + + + Y NS K
Sbjct: 71 VNSALATDPRKEEAAYMSAICYYQGSMDYNLDQKDTELAINELQSFLNNYPNSERAKNIN 130
Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
+ +L K E R Y K E +AI F+ VL ++ + + L++A
Sbjct: 131 ELIDELSYKLEFKAYENARQYYKMLELKSAIISFENVLDDFPSTKLRPKIETMLMDAKAK 190
Query: 240 LALMDE----------AREVVSLIQERYPQGYWARYVETLVK 271
LA+ + A L+++ YP A+ TL K
Sbjct: 191 LAIDSKFELKRERLEHAVAYTHLMEKNYPDTDIAKTAVTLRK 232
>gi|254490143|ref|ZP_05103334.1| tol-pal system protein YbgF, putative [Methylophaga thiooxidans
DMS010]
gi|224464629|gb|EEF80887.1| tol-pal system protein YbgF, putative [Methylophaga thiooxydans
DMS010]
Length = 271
Score = 44.0 bits (101), Expect = 0.020, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 31/78 (39%), Gaps = 2/78 (2%)
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+ L+ G+Y A+ Q Y D+ + A EA L +A + ++
Sbjct: 150 YQSALQTLRSGQYQEAVTALQAFPEQYPDSIYLPNAYYWQGEAKYVLREFPDAAALFQIV 209
Query: 254 QERYPQGYWARYVETLVK 271
++YP + + L+K
Sbjct: 210 IDQYPAS--TKVADALLK 225
Score = 40.9 bits (93), Expect = 0.19, Method: Composition-based stats.
Identities = 17/128 (13%), Positives = 42/128 (32%), Gaps = 14/128 (10%)
Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
+ + + E+Y +S Y+ A ++ + L
Sbjct: 150 YQSALQTLRSGQYQEAVTALQAFPEQYPDSIYLPNAYYWQGEAKYVL------------- 196
Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
E+ A FQ+V+ Y + +A+ + + A ++ + ++YP
Sbjct: 197 -REFPDAAALFQIVIDQYPASTKVADALLKRGFTEDEMGDTQRAIATLNQVIDQYPDSSA 255
Query: 263 ARYVETLV 270
A+ + +
Sbjct: 256 AKLAKVRL 263
>gi|220904572|ref|YP_002479884.1| hypothetical protein Ddes_1304 [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219868871|gb|ACL49206.1| hypothetical protein Ddes_1304 [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 982
Score = 44.0 bits (101), Expect = 0.020, Method: Composition-based stats.
Identities = 23/222 (10%), Positives = 58/222 (26%), Gaps = 11/222 (4%)
Query: 46 VYLDSVTDVRYQREVYEKAVL-FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
+L S D Y + + +LK + K + S + + A
Sbjct: 725 EFLKSPMDPNYGEAAFTEFFNRYLKAGAWDKVLDLGKLVSTWPMNRQLRNQLDYALALSA 784
Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
+ A ++ + + A+ +D+ + ++ +R
Sbjct: 785 QNLNLTGPALAMWAQLADRQDIPLYQRAYATYFLARDAEQRKDIKDSYELNRKVIDLFTR 844
Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
+ + R + A + + + A + ++
Sbjct: 845 L---------QEERSDKADPQRIKDAMAAL-MDISEVANRVPEALEWVGRYNAYASPESP 894
Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
R Y L A+ ++ + YP +A+
Sbjct: 895 EYPGLRFREARLYRKLGDAARAQALLEDVVRNYPNSPFAQAA 936
Score = 43.2 bits (99), Expect = 0.037, Method: Composition-based stats.
Identities = 35/221 (15%), Positives = 63/221 (28%), Gaps = 20/221 (9%)
Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
D + V V E+A ++E+ + +A + + L
Sbjct: 288 DEQGNPVPRPINPEIVMEEAERLIRERKYIEALPQLEKLRSLPGLHPEMLEKALYYISDC 347
Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
A G E I + + + Y+
Sbjct: 348 TWARYADN-PLAGYEAIVSSTSEAMNANLRSPRVPEALLRLGLANVNVGNLVDAGGYIVA 406
Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
++ RY + +A +G+ LKRG A F +VL Y ++
Sbjct: 407 LLRRYPD--------------YPGVAQGFTALGKAQLKRGLDERAEQSFSMVLDKYPESS 452
Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
+ +EA L EA+ A+ + + W RY
Sbjct: 453 YLQEASVGLAEAFNRQKKFQNAQ-----LILDFISKRWPRY 488
Score = 39.8 bits (90), Expect = 0.42, Method: Composition-based stats.
Identities = 9/49 (18%), Positives = 21/49 (42%)
Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
Y D + L +A + L + A + S++ ++YP+ + +
Sbjct: 409 RRYPDYPGVAQGFTALGKAQLKRGLDERAEQSFSMVLDKYPESSYLQEA 457
>gi|213962073|ref|ZP_03390338.1| TPR-domain containing protein [Capnocytophaga sputigena Capno]
gi|213955426|gb|EEB66743.1| TPR-domain containing protein [Capnocytophaga sputigena Capno]
Length = 1001
Score = 44.0 bits (101), Expect = 0.020, Method: Composition-based stats.
Identities = 32/228 (14%), Positives = 60/228 (26%), Gaps = 16/228 (7%)
Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
R Y + +++ A YF Q + A S ++ A
Sbjct: 458 LSARASYWAGESAYQLKDYKGAETYFTQFVNNPAAAKTEEYSKGYYGLAYSQFNQHNYAT 517
Query: 115 SLGEEYITQYPESKNVDYVY----------------YLVGMSYAQMIRDVPYDQRATKLM 158
++ K+ + + + Y ++I + DQ
Sbjct: 518 AIVNFEKYLKQNPKDNVWKHDAMLRLADSYFVTGKYWPAMEGYNKLIEEKSADQDYAAYQ 577
Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
V+R + G N E+ Y+ +G + +Q ++
Sbjct: 578 KAISYGFVDRLPSKIEDLERFVKNYKGSNLRPNALFELANAYVTKGSTEKGVQYYQQLIK 637
Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
Y AM R Y +A + I + YP A
Sbjct: 638 EYKGNVLVPRAMLREGLVYYNKGEDQKALTLFKTIAKDYPNTNEASQA 685
>gi|251794204|ref|YP_003008935.1| hypothetical protein Pjdr2_0168 [Paenibacillus sp. JDR-2]
gi|247541830|gb|ACS98848.1| TPR repeat-containing protein [Paenibacillus sp. JDR-2]
Length = 581
Score = 44.0 bits (101), Expect = 0.020, Method: Composition-based stats.
Identities = 27/207 (13%), Positives = 61/207 (29%), Gaps = 3/207 (1%)
Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
+ + +E+AV L ++ KA +YF + P V ++
Sbjct: 10 EQTAKIIPIQWDATFFFERAVRSLDRYHYDKALKYFRRAVEYEPENPVNHCNMAGIMSEM 69
Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
+ + + + + + M + QY+
Sbjct: 70 GNYEESNRILKWIVDELDPTMTECHFYMANNYANMEMYEAAEGALIHYLEEDADGQYLDE 129
Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
E Y +T + + E + R L+ G++ A+ + ++ +
Sbjct: 130 AEEMMELLQYELERPAPLTNIKAREGMVEHDQARKLLEEGKFTEAVRILEKIIEEQPEFL 189
Query: 225 HAEEAMARLVEAYVALALMDEAREVVS 251
A L AY + + D+A +
Sbjct: 190 A---ARNNLALAYYYMGMFDKAMATIR 213
>gi|289207753|ref|YP_003459819.1| tol-pal system protein YbgF [Thioalkalivibrio sp. K90mix]
gi|288943384|gb|ADC71083.1| tol-pal system protein YbgF [Thioalkalivibrio sp. K90mix]
Length = 276
Score = 44.0 bits (101), Expect = 0.020, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 42/97 (43%), Gaps = 1/97 (1%)
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY-LKRGEYVAAIPRFQLVLANY 220
+++ N+ RF T + +A G++ AA+ F+ + Y
Sbjct: 161 FEQLMAGDYNAAMSGLERFIETYPDSDYSANAWYWLAEAKYASGDFEAALEDFEHLREQY 220
Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
+++ + +A+ ++ A+ L DEARE + ++ +
Sbjct: 221 PESDKSGDALLKIGYAHYELGNEDEAREALEAVRADF 257
Score = 43.2 bits (99), Expect = 0.035, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+ L G+Y AA+ + + Y D++++ A L EA A + A E +
Sbjct: 157 YQEAFEQLMAGDYNAAMSGLERFIETYPDSDYSANAWYWLAEAKYASGDFEAALEDFEHL 216
Query: 254 QERYPQGYWARYVETLVK 271
+E+YP+ + + L+K
Sbjct: 217 REQYPESD--KSGDALLK 232
Score = 36.7 bits (82), Expect = 3.6, Method: Composition-based stats.
Identities = 16/99 (16%), Positives = 40/99 (40%)
Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
++ ++ Y++A L +++ A + +P + + + A +Y
Sbjct: 142 EVIEFDLPEADEQAAYQEAFEQLMAGDYNAAMSGLERFIETYPDSDYSANAWYWLAEAKY 201
Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
++G ++ A E QYPES +G ++ ++
Sbjct: 202 ASGDFEAALEDFEHLREQYPESDKSGDALLKIGYAHYEL 240
>gi|189465275|ref|ZP_03014060.1| hypothetical protein BACINT_01621 [Bacteroides intestinalis DSM
17393]
gi|189437549|gb|EDV06534.1| hypothetical protein BACINT_01621 [Bacteroides intestinalis DSM
17393]
Length = 1010
Score = 44.0 bits (101), Expect = 0.020, Method: Composition-based stats.
Identities = 36/226 (15%), Positives = 71/226 (31%), Gaps = 22/226 (9%)
Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
Y Y A + E++++ A F + ++ + +
Sbjct: 506 NLTPDRNTETYALAYYNLAYIAFHEKDYTLAQNRFLKFTQLEKG--------ENATALAD 557
Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
+ + + + + G + V Q+ + ++R+
Sbjct: 558 AYNRIGDCHLHVRRFDEAKQYYNKAENMGTPAGDYSFYQLALVAGLQKDYDGKVALLNRL 617
Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
+Y NSPY A + E GR Y++ AI F+ +L Y ++
Sbjct: 618 SGKYPNSPYAINALY--------------EKGRSYVQTNNSRQAIAAFKELLDKYPESPV 663
Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+ +A A + Y D A E + +YP AR +K
Sbjct: 664 SRKAAAEIGLLYYQNDDYDRAIEAYKHVVTQYPGSEEARLAMRDLK 709
Score = 44.0 bits (101), Expect = 0.025, Method: Composition-based stats.
Identities = 22/271 (8%), Positives = 67/271 (24%), Gaps = 29/271 (10%)
Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
K + + ++ L+ + S + + +Y++ +++ ++ A
Sbjct: 1 MKNKISRILCTALCCAPLLATAQTSEKIT---------SPQRLYQEGQSLFQQKAYAAAI 51
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
R G + +Y A L + + +Y
Sbjct: 52 PPLQAFVRQVDAEGKPLPAEGERMEAEYMLVC--AAYELKDTKSIDKLRAYLDEYPDTPY 109
Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA------ 191
++ V + + + + + + + +
Sbjct: 110 ANRIYALMASVYFFEGNYDAAMAMFNASRLDLLGNEERDDMTYRLATCYLKTGNVKEAAI 169
Query: 192 --------KEVEIGRYYLKRGEYVAAIPRFQLVLANY----SDAEHAEEAMARLVEAYVA 239
+ + R+ L + + ++ A + E Y+
Sbjct: 170 WFETLRSTSKKYVADCTYYLSYIRYTQQRYDDALTGFLSLQDNEKYKALAPYYIAEIYLI 229
Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETLV 270
D+A V YP + + ++
Sbjct: 230 KKNYDKAEIVAQNYLSAYPNNEYTAEMYRVL 260
Score = 43.2 bits (99), Expect = 0.037, Method: Composition-based stats.
Identities = 23/210 (10%), Positives = 53/210 (25%), Gaps = 20/210 (9%)
Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
+Y + + + +A FN+ P +L + + +
Sbjct: 478 ADAIYWRGESYYRLNRMQEAARNFNEYLNLTPDRNTETYALAYYNLAYIAFHEKDYTLAQ 537
Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
E I D R QY ++
Sbjct: 538 NRFLKFTQLEKGENATA----LADAYNRIGDCHLHVRRFDEAKQYYNK------------ 581
Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
+G ++ + +Y + + Y ++ +A A+ +
Sbjct: 582 ----AENMGTPAGDYSFYQLALVAGLQKDYDGKVALLNRLSGKYPNSPYAINALYEKGRS 637
Query: 237 YVALALMDEAREVVSLIQERYPQGYWARYV 266
YV +A + ++YP+ +R
Sbjct: 638 YVQTNNSRQAIAAFKELLDKYPESPVSRKA 667
Score = 35.2 bits (78), Expect = 9.7, Method: Composition-based stats.
Identities = 31/213 (14%), Positives = 67/213 (31%), Gaps = 15/213 (7%)
Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
+YEK +++ N +A F + +P + V+RK+ + Y Y +A +
Sbjct: 630 ALYEKGRSYVQTNNSRQAIAAFKELLDKYPESPVSRKAAAEIGLLYYQNDDYDRAIEAYK 689
Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIR---------------DVPYDQRATKLMLQYMS 163
+TQYP S+ + Y R ++ + +
Sbjct: 690 HVVTQYPGSEEARLAMRDLKSIYVDANRVDEFAELAAKVPGEIRFDASEQDSLTYIAAEK 749
Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
++ R+ ++ + K + A+ L Y D
Sbjct: 750 VYMKGDIAPAKASFTRYLLSYPNGAFSLNAHYYLCVIGKEQKDEEAVLEHAGKLLEYPDT 809
Query: 224 EHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
+++EA+ E D+A ++ +
Sbjct: 810 PYSQEALIARAEILFNRKHFDQALTDYKQLKAK 842
>gi|262380172|ref|ZP_06073327.1| type IV pilus biogenesis/stability protein PilW [Acinetobacter
radioresistens SH164]
gi|262298366|gb|EEY86280.1| type IV pilus biogenesis/stability protein PilW [Acinetobacter
radioresistens SH164]
Length = 263
Score = 44.0 bits (101), Expect = 0.020, Method: Composition-based stats.
Identities = 27/255 (10%), Positives = 72/255 (28%), Gaps = 13/255 (5%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+YK + + +++ + + + + VR + A ++K + A
Sbjct: 1 MYKTFVLLTVTLSALLVTACQTPDTLSKDPEKAVKVRT-----QLAAEYIKSGDLDAAKR 55
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+Q A + + + S +A S I+ P++ Y
Sbjct: 56 ALDQALEVDSRDATANMMMGVLLQQEGSQLNLDKAESYFRRSISIEPKNAQARNNYGAYL 115
Query: 139 MSYAQMIRDVPY--------DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
+ + L+ + RI + N + +
Sbjct: 116 YQIGRYKDAIEQLEIAGATLGYEQRYQALENLGRIYLKLGNVANAEKTFKQALQANRDSS 175
Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
+E+ + R + AA ++ + A+ + A + +V
Sbjct: 176 ISMLELAEIFYLRQQIPAATQLYEQYVRRVGQKNQGARALWIGIRIARANDDKMGTQVLV 235
Query: 251 SLIQERYPQGYWARY 265
+ ++ +P +
Sbjct: 236 NQLRALFPDSQEYQR 250
>gi|240080649|ref|ZP_04725192.1| hypothetical protein NgonF_04952 [Neisseria gonorrhoeae FA19]
gi|240123590|ref|ZP_04736546.1| hypothetical protein NgonP_06559 [Neisseria gonorrhoeae PID332]
gi|268596773|ref|ZP_06130940.1| periplasmic protein [Neisseria gonorrhoeae FA19]
gi|268682218|ref|ZP_06149080.1| periplasmic protein [Neisseria gonorrhoeae PID332]
gi|268550561|gb|EEZ45580.1| periplasmic protein [Neisseria gonorrhoeae FA19]
gi|268622502|gb|EEZ54902.1| periplasmic protein [Neisseria gonorrhoeae PID332]
Length = 237
Score = 44.0 bits (101), Expect = 0.021, Method: Composition-based stats.
Identities = 12/60 (20%), Positives = 21/60 (35%)
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
+ G + I + D+ A E + ++ E L D AR + + YP
Sbjct: 166 RMGNCESVIEIGGRYANRFKDSPTAPEVIFKIGECQYRLQQKDIARATWRSLIQTYPGSP 225
>gi|59801164|ref|YP_207876.1| hypothetical protein NGO0747 [Neisseria gonorrhoeae FA 1090]
gi|240014091|ref|ZP_04721004.1| hypothetical protein NgonD_05483 [Neisseria gonorrhoeae DGI18]
gi|240016525|ref|ZP_04723065.1| hypothetical protein NgonFA_05034 [Neisseria gonorrhoeae FA6140]
gi|240115740|ref|ZP_04729802.1| hypothetical protein NgonPID1_05754 [Neisseria gonorrhoeae PID18]
gi|240118036|ref|ZP_04732098.1| hypothetical protein NgonPID_06181 [Neisseria gonorrhoeae PID1]
gi|240121652|ref|ZP_04734614.1| hypothetical protein NgonPI_07778 [Neisseria gonorrhoeae PID24-1]
gi|240125772|ref|ZP_04738658.1| hypothetical protein NgonSK_06077 [Neisseria gonorrhoeae SK-92-679]
gi|268601418|ref|ZP_06135585.1| periplasmic protein [Neisseria gonorrhoeae PID18]
gi|268603749|ref|ZP_06137916.1| periplasmic protein [Neisseria gonorrhoeae PID1]
gi|268684369|ref|ZP_06151231.1| periplasmic protein [Neisseria gonorrhoeae SK-92-679]
gi|293399031|ref|ZP_06643196.1| hypothetical protein NGNG_00222 [Neisseria gonorrhoeae F62]
gi|59718059|gb|AAW89464.1| conserved hypothetical protein [Neisseria gonorrhoeae FA 1090]
gi|268585549|gb|EEZ50225.1| periplasmic protein [Neisseria gonorrhoeae PID18]
gi|268587880|gb|EEZ52556.1| periplasmic protein [Neisseria gonorrhoeae PID1]
gi|268624653|gb|EEZ57053.1| periplasmic protein [Neisseria gonorrhoeae SK-92-679]
gi|291610445|gb|EFF39555.1| hypothetical protein NGNG_00222 [Neisseria gonorrhoeae F62]
Length = 237
Score = 44.0 bits (101), Expect = 0.021, Method: Composition-based stats.
Identities = 12/60 (20%), Positives = 21/60 (35%)
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
+ G + I + D+ A E + ++ E L D AR + + YP
Sbjct: 166 RMGNCESVIEIGGRYANRFKDSPTAPEVIFKIGECQYRLQQKDIARATWRSLIQTYPGSP 225
>gi|296162178|ref|ZP_06844974.1| tol-pal system protein YbgF [Burkholderia sp. Ch1-1]
gi|295887564|gb|EFG67386.1| tol-pal system protein YbgF [Burkholderia sp. Ch1-1]
Length = 249
Score = 44.0 bits (101), Expect = 0.021, Method: Composition-based stats.
Identities = 20/123 (16%), Positives = 42/123 (34%), Gaps = 14/123 (11%)
Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
+ K + ++ NSPY A++++ G +Y
Sbjct: 137 QQFRNGDFKNAAASFRTFISKFPNSPYQPTAQYWL--------------GNALYALRDYK 182
Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
+ +Q V+ NY A EA+ + + AR+ + I +Y A+ +
Sbjct: 183 GSTATWQGVVKNYPQHPRAPEALLAIANNQLEQGQKAAARKTLEQIVAQYGGSDVAQSAQ 242
Query: 268 TLV 270
+ +
Sbjct: 243 SKL 245
Score = 41.7 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 20/142 (14%), Positives = 40/142 (28%)
Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184
+S +D + V Q K Y + + R + V
Sbjct: 63 DQSNRLDQLNQQVATLRGQNEDMGNQLATLQKQQKDYYTDLDTRLKKFEPQQQTVDGVQG 122
Query: 185 GRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244
+ + G++ A F+ ++ + ++ + A L A AL
Sbjct: 123 EVQPGETESFNAASQQFRNGDFKNAAASFRTFISKFPNSPYQPTAQYWLGNALYALRDYK 182
Query: 245 EAREVVSLIQERYPQGYWARYV 266
+ + + YPQ A
Sbjct: 183 GSTATWQGVVKNYPQHPRAPEA 204
>gi|322418106|ref|YP_004197329.1| tol-pal system protein YbgF [Geobacter sp. M18]
gi|320124493|gb|ADW12053.1| tol-pal system protein YbgF [Geobacter sp. M18]
Length = 283
Score = 44.0 bits (101), Expect = 0.021, Method: Composition-based stats.
Identities = 21/90 (23%), Positives = 35/90 (38%)
Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
+ A + IG Y Y A+ FQ V+ Y D + A AM + A+ L
Sbjct: 192 QHPKHSLAANAQYWIGESYYAEKNYEQAVLEFQEVIKTYPDKDKAPAAMLKQGMAFRELG 251
Query: 242 LMDEAREVVSLIQERYPQGYWARYVETLVK 271
A ++ + E +P+ A+ + K
Sbjct: 252 DSKSANYIMKKLVEEHPKSEEAKIAKEKYK 281
>gi|238021435|ref|ZP_04601861.1| hypothetical protein GCWU000324_01335 [Kingella oralis ATCC 51147]
gi|237868415|gb|EEP69421.1| hypothetical protein GCWU000324_01335 [Kingella oralis ATCC 51147]
Length = 225
Score = 44.0 bits (101), Expect = 0.021, Method: Composition-based stats.
Identities = 14/73 (19%), Positives = 30/73 (41%)
Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
+ + K + I Q +S + +A EA++ + + + D AR+ I ++Y
Sbjct: 150 QAHQKLNHCQSVINIGQRYATRFSGSLNAPEALSLVAQCQWRIQQQDIARDTWRKIIQQY 209
Query: 258 PQGYWARYVETLV 270
P+ A +
Sbjct: 210 PKSSAAARARNQI 222
>gi|213422409|ref|ZP_03355475.1| hypothetical protein Salmonentericaenterica_33610 [Salmonella
enterica subsp. enterica serovar Typhi str. E01-6750]
Length = 124
Score = 44.0 bits (101), Expect = 0.021, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 23/74 (31%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ AI FQ + Y D+ + A L + D+A +
Sbjct: 7 YNAAIALVQDKSRQDDAIVAFQNFIKKYPDSTYQPNANYWLGQLNYNKGKKDDAAYYFAS 66
Query: 253 IQERYPQGYWARYV 266
+ + YP+ A
Sbjct: 67 VVKNYPKSPKAADA 80
Score = 43.2 bits (99), Expect = 0.042, Method: Composition-based stats.
Identities = 19/121 (15%), Positives = 41/121 (33%), Gaps = 14/121 (11%)
Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
D+ + +++Y +S Y A +++ K+ A
Sbjct: 15 QDKSRQDDAIVAFQNFIKKYPDSTYQPNANYWLGQLNYNKGKKD--------------DA 60
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
F V+ NY + A +AM ++ +A+ V + +YP A+ +
Sbjct: 61 AYYFASVVKNYPKSPKAADAMYKVGVIMQDKGDTAKAKAVYQQVINKYPGTDGAKQAQKR 120
Query: 270 V 270
+
Sbjct: 121 L 121
>gi|218442020|ref|YP_002380349.1| hypothetical protein PCC7424_5131 [Cyanothece sp. PCC 7424]
gi|218174748|gb|ACK73481.1| TPR repeat-containing protein [Cyanothece sp. PCC 7424]
Length = 361
Score = 44.0 bits (101), Expect = 0.021, Method: Composition-based stats.
Identities = 22/238 (9%), Positives = 53/238 (22%), Gaps = 13/238 (5%)
Query: 19 LYKFALTIFFSIAVCFLVGWE-------RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQ 71
+ K + + + ++ + S L + ++ + V +K
Sbjct: 1 MIKPFRPLISLLTLVPILSFGIEPVKAQSPRSNPQPLLAQNSQNSVEVLFNQGVAKIKAG 60
Query: 72 NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI---TQYPESK 128
NFS A + F + R P A + + + + Q ++
Sbjct: 61 NFSAAIKDFTEVIRLNPNLPEAYNNRGNARSKLGDNKGAIEDYNQAINLNPKSEQAYYNR 120
Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
+ + + +
Sbjct: 121 GKARSELGDNKGAIEDYNQALNLNPNSAEAYNNRGISRHELKDHVGAMQDLNQAIRLNPK 180
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
+A G G+ A + ++ EA Y + +A
Sbjct: 181 MAEAYSNRGNVRTTIGDTFGAFKDLNHAIGLDPNS---AEAYNNRGVTYARVGDYQKA 235
>gi|159043662|ref|YP_001532456.1| Tol-Pal system YbgF [Dinoroseobacter shibae DFL 12]
gi|157911422|gb|ABV92855.1| Tol-Pal system YbgF [Dinoroseobacter shibae DFL 12]
Length = 272
Score = 44.0 bits (101), Expect = 0.021, Method: Composition-based stats.
Identities = 16/70 (22%), Positives = 27/70 (38%)
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
A G+ +G++ A + + D A EA+ RL + L DEA
Sbjct: 186 AEAHYLRGQAEAAQGQWSRAARAYLESFSGSPDGPRAPEALYRLGLSLAELGQRDEACIT 245
Query: 250 VSLIQERYPQ 259
+ + R+P
Sbjct: 246 LREVSVRFPG 255
>gi|255531080|ref|YP_003091452.1| tetratricopeptide domain-containing protein [Pedobacter heparinus
DSM 2366]
gi|255344064|gb|ACU03390.1| Tetratricopeptide domain protein [Pedobacter heparinus DSM 2366]
Length = 1005
Score = 44.0 bits (101), Expect = 0.021, Method: Composition-based stats.
Identities = 27/211 (12%), Positives = 57/211 (27%), Gaps = 23/211 (10%)
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
Y A +++ + KA YF + + + Y + Y
Sbjct: 518 YALAYSAFEDEKYGKAALYFERFLKGNDKDQKTVNDATIRLADSYFVN---------KSY 568
Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
+ + + M +++++ NS Y A F
Sbjct: 569 GNALVNYNRIIDSKASGEDYALFQRGMIQGLDNQNDAKINTMQNLLKQFPNSNYADDAGF 628
Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
E+ Y +GE + +++ Y ++ + A+ +
Sbjct: 629 --------------EMAYTYFNKGELDKSKSDLISLVSQYPNSSYVPRALVTIGLVQYNQ 674
Query: 241 ALMDEAREVVSLIQERYPQGYWARYVETLVK 271
D A E + YP A+ +K
Sbjct: 675 DQDDAALESFKKVIRDYPSTEEAKQALESIK 705
>gi|170691333|ref|ZP_02882498.1| tol-pal system protein YbgF [Burkholderia graminis C4D1M]
gi|170143538|gb|EDT11701.1| tol-pal system protein YbgF [Burkholderia graminis C4D1M]
Length = 252
Score = 44.0 bits (101), Expect = 0.021, Method: Composition-based stats.
Identities = 18/123 (14%), Positives = 42/123 (34%), Gaps = 14/123 (11%)
Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
+ K + ++ +SPY A++++ G +Y
Sbjct: 140 QQFRNGDFKNAAASFRSFIAKFPSSPYQPTAQYWL--------------GNALYALRDYK 185
Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
+ +Q V+ NY A EA+ + + A++ + I +Y A+ +
Sbjct: 186 GSTATWQGVVKNYPQHPRAPEALLAIANNQLEQGQKAAAKKTLEQIVAQYGGSDVAQSAQ 245
Query: 268 TLV 270
+ +
Sbjct: 246 SKL 248
Score = 40.5 bits (92), Expect = 0.26, Method: Composition-based stats.
Identities = 21/142 (14%), Positives = 38/142 (26%)
Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184
+S +D + V Q K Y + + R + V
Sbjct: 66 DQSNRLDQLNQQVATLRGQNEDMGNQLATLQKQQKDYYTDLDTRLKKFEPQQQTVDGVQG 125
Query: 185 GRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244
+ G++ A F+ +A + + + A L A AL
Sbjct: 126 EVQPGETDAFNAASQQFRNGDFKNAAASFRSFIAKFPSSPYQPTAQYWLGNALYALRDYK 185
Query: 245 EAREVVSLIQERYPQGYWARYV 266
+ + + YPQ A
Sbjct: 186 GSTATWQGVVKNYPQHPRAPEA 207
>gi|34541292|ref|NP_905771.1| TPR domain-containing protein [Porphyromonas gingivalis W83]
gi|34397608|gb|AAQ66670.1| TPR domain protein [Porphyromonas gingivalis W83]
Length = 995
Score = 44.0 bits (101), Expect = 0.021, Method: Composition-based stats.
Identities = 35/234 (14%), Positives = 71/234 (30%), Gaps = 16/234 (6%)
Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS--AFVQYSAGKYQ 111
+ + + L + +F A + A L + ++A +Y
Sbjct: 466 EYFPEAYFLRGNLRYRAGDFPTAAADYRAYISAAGDRDAANLPLGYYRLGYSLFNAERYD 525
Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM--------- 162
A +EY+++ + N+ Y M RD + A + +
Sbjct: 526 MALEAFKEYVSRSGIAPNLSADAYARIGDCRYMKRDFHGAREAYSMAYRVYPSGGDYALL 585
Query: 163 -----SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
+ ++Y + L A E G + G++ A F V+
Sbjct: 586 RRARLEGLAKQYADQIQTLDKLIREFPDSRHLTAALYEKGCGAVLSGKHNVAEEAFNAVV 645
Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
D+ A ++ +L Y EA I +RYP+ + ++
Sbjct: 646 KRSPDSREARQSSLQLGLLYYNTGRTKEAIRTYQRIIDRYPRSEETTVALSDLR 699
>gi|302039008|ref|YP_003799330.1| putative soluble lytic murein transglycosylase [Candidatus
Nitrospira defluvii]
gi|300607072|emb|CBK43405.1| putative Soluble lytic murein transglycosylase [Candidatus
Nitrospira defluvii]
Length = 745
Score = 44.0 bits (101), Expect = 0.022, Method: Composition-based stats.
Identities = 31/198 (15%), Positives = 59/198 (29%), Gaps = 13/198 (6%)
Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
LK+ +A E + P + + K+ + YSA +A +
Sbjct: 130 GESLLKQNEPIQAAELLETIPKIVPDSSLIAKAAYRTGEAWYSANVCFRAVDWLGRAVVL 189
Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
+ + + + R + ++ RY +SP + A+ +
Sbjct: 190 AEKDPAAPLALWHQAECHIRENRLP--------EARTALKQLWLRYPHSPEAREAKARLD 241
Query: 184 VGR-----NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
A + +L A+ + LA +A +L AYV
Sbjct: 242 TALGGESWAPTAEDHSIRAQAFLGLAMQAEAVEELRRFLAMAPGHPRRFDARLKLGVAYV 301
Query: 239 ALALMDEAREVVSLIQER 256
L D+ARE +
Sbjct: 302 RLKQYDQARETFRALVAD 319
Score = 38.6 bits (87), Expect = 0.93, Method: Composition-based stats.
Identities = 14/81 (17%), Positives = 25/81 (30%)
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
A G + A+ + A A+ E ++ + EAR
Sbjct: 160 AKAAYRTGEAWYSANVCFRAVDWLGRAVVLAEKDPAAPLALWHQAECHIRENRLPEARTA 219
Query: 250 VSLIQERYPQGYWARYVETLV 270
+ + RYP AR + +
Sbjct: 220 LKQLWLRYPHSPEAREAKARL 240
>gi|301063222|ref|ZP_07203771.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2]
gi|300442650|gb|EFK06866.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2]
Length = 400
Score = 44.0 bits (101), Expect = 0.022, Method: Composition-based stats.
Identities = 12/71 (16%), Positives = 26/71 (36%), Gaps = 5/71 (7%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ ++ L +FF V + G + L V+D Y + + + + +A
Sbjct: 1 MRRYFLFVFFLSLVWLVSGCATKK-----LAPVSDEDNPAHHYLMGMELVDKGDIDEADA 55
Query: 79 YFNQCSRDFPF 89
F + + P
Sbjct: 56 RFQRALQLEPD 66
>gi|294054025|ref|YP_003547683.1| hypothetical protein Caka_0488 [Coraliomargarita akajimensis DSM
45221]
gi|293613358|gb|ADE53513.1| hypothetical protein Caka_0488 [Coraliomargarita akajimensis DSM
45221]
Length = 368
Score = 44.0 bits (101), Expect = 0.022, Method: Composition-based stats.
Identities = 14/113 (12%), Positives = 32/113 (28%)
Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
++ E N + + + V Y + A + +
Sbjct: 255 AAYCGIQLGEHIENHDFATQVSVLECGEKAFPLQQLVLGTYYLKREQLKEAMRAVSEGIA 314
Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
E M R + Y + + + A+ V + +P WA + ++
Sbjct: 315 FARPTEAWTPELMFRSAQLYERIEMPEIAQSVYQELILFFPASEWAEEAQAVI 367
>gi|125975162|ref|YP_001039072.1| peptidase S41 [Clostridium thermocellum ATCC 27405]
gi|256003175|ref|ZP_05428167.1| peptidase S41 [Clostridium thermocellum DSM 2360]
gi|281418417|ref|ZP_06249436.1| peptidase S41 [Clostridium thermocellum JW20]
gi|125715387|gb|ABN53879.1| peptidase S41 [Clostridium thermocellum ATCC 27405]
gi|255992866|gb|EEU02956.1| peptidase S41 [Clostridium thermocellum DSM 2360]
gi|281407501|gb|EFB37760.1| peptidase S41 [Clostridium thermocellum JW20]
gi|316939327|gb|ADU73361.1| peptidase S41 [Clostridium thermocellum DSM 1313]
Length = 745
Score = 44.0 bits (101), Expect = 0.022, Method: Composition-based stats.
Identities = 24/241 (9%), Positives = 54/241 (22%), Gaps = 13/241 (5%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K L + VC ++Y + A + A +
Sbjct: 1 MKKRLLLFILVLGVCLFTSCGNFVKTNIY-------------FSAAESAFDSGKYEDAIK 47
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
Y+++ +A ++ + + E ++ N
Sbjct: 48 YYDKVIEADSGNAMAYLGKGLALDALGKYEEALEFFDKAIEINKDLAKAYNAKGTTLASL 107
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
Y + + + Y + + N + A Y V
Sbjct: 108 ERYEESLENFKKAAELKPKNSAYQNDVAYGLNNLGRFEEAIQYAEKALKLNPRSGVAYSN 167
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
+ + A A + +EA E++ + E P
Sbjct: 168 KGFALDALGKLDEAIECYDKAIELSPTYTNAYYNKSIAVFKMGKTEEAIELLDKVLEIDP 227
Query: 259 Q 259
Sbjct: 228 D 228
Score = 37.5 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 21/223 (9%), Positives = 52/223 (23%), Gaps = 5/223 (2%)
Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90
F +G ++ + D + K + + KA E F+ +P
Sbjct: 204 IAVFKMGKTEEAIELLDKVLEIDPDDLDAITSKGYCLNELGKYEKAIECFDTAIEKYPKD 263
Query: 91 GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150
S + + + + +P+S + + +
Sbjct: 264 PYPYVCKATSLYYLGKYDNALEECNKAIKLEYTFPDSYIWKAKILVEKGDIEEARKSCDE 323
Query: 151 DQRATKLM--LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
+ +I N P + + Y
Sbjct: 324 FLAIAEDASVYDMKGQIYLHEYNYPEAIKLFDKAIEVDPSYEDSYINKIYCLYLQKNYKE 383
Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
I V + ++ + + Y + ++A E +
Sbjct: 384 CIEFATKVQTIFPNSADIP---WYIGDCYSIMMEPEKAIEYLK 423
>gi|302037598|ref|YP_003797920.1| hypothetical protein NIDE2282 [Candidatus Nitrospira defluvii]
gi|300605662|emb|CBK41995.1| protein of unknown function, TPR-like [Candidatus Nitrospira
defluvii]
Length = 693
Score = 44.0 bits (101), Expect = 0.022, Method: Composition-based stats.
Identities = 35/210 (16%), Positives = 58/210 (27%), Gaps = 6/210 (2%)
Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFA-GVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
+A + A + S +P A +LL A A + +
Sbjct: 202 QAHSLYRMGRIKDADALYESLSSRWPAALRADPYALLRYADTAGEAQRGPVMREQLLHFY 261
Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK--GAR 179
YP +V + SY + R LM QY V Y
Sbjct: 262 NLYPSRPENPFVLMHLADSYKEAGRWEDASMFYAALMSQYPDAQVVPTARLRYADVQEHL 321
Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
N + LK GE ++ F+ Y D+ EA+ L +A
Sbjct: 322 TPEGEEVNLRHTIAAHLANVPLKPGEMLSPRQLFESSAKQYEDSPVGSEALFHLGQALER 381
Query: 240 LALMDEAREVVSLIQE---RYPQGYWARYV 266
++A + + ++ W
Sbjct: 382 AGKQEDALKAYERGVQRAGKFENDPWPEKS 411
Score = 37.1 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 17/220 (7%), Positives = 42/220 (19%), Gaps = 5/220 (2%)
Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
+ L S E+ + L ++ + A+
Sbjct: 88 ESSLKSSAQELRPLEIIDL-YKALMREDPQSTNARRAAWRIGDVYRVEGWYQEAQIAYQH 146
Query: 105 Y---SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
S A K+ + +
Sbjct: 147 ALSLSERDSYDANRAMLGLGYVLRGIKSWKDSVQTFDHVLKRSTDPALLVSASLGQAHSL 206
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
+ ++ Y + + R A + + Y
Sbjct: 207 YRMGRIKDADALYESLSSRWPAALRADPYALLRY-ADTAGEAQRGPVMREQLLHFYNLYP 265
Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
+ L ++Y ++A + + +YP
Sbjct: 266 SRPENPFVLMHLADSYKEAGRWEDASMFYAALMSQYPDAQ 305
>gi|23296072|gb|AAN12289.1| hypothetical protein [Aquifex pyrophilus]
Length = 233
Score = 44.0 bits (101), Expect = 0.022, Method: Composition-based stats.
Identities = 17/123 (13%), Positives = 37/123 (30%), Gaps = 9/123 (7%)
Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
PY + +++Y + A F++ +L +E + G+
Sbjct: 116 NPYKMKRLNEARDAFVNFIKKYPKTNLTDNAYFWLGTIYYELGNEERALQILKTLIGKCK 175
Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
D + LV+ Y EA ++ ++E +P E
Sbjct: 176 EGRL---------PDCNKLPDTYYMLVKIYAEEGNESEAERYLNRLKEEFPDTPLIEKAE 226
Query: 268 TLV 270
++
Sbjct: 227 KVL 229
>gi|152981712|ref|YP_001354159.1| Tol-Pal cell envelope complex subunit YbgF [Janthinobacterium sp.
Marseille]
gi|151281789|gb|ABR90199.1| YbgF subunit of Tol-Pal Cell Envelope Complex [Janthinobacterium
sp. Marseille]
Length = 243
Score = 44.0 bits (101), Expect = 0.022, Method: Composition-based stats.
Identities = 17/112 (15%), Positives = 33/112 (29%), Gaps = 2/112 (1%)
Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
+ + R A Q + K G+Y + F +
Sbjct: 91 KDFYVDLDNRLRKLEPQVVAVDGKDAMVGQSEQSAYDSALALFKAGDYKKSGTAFGDFVQ 150
Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
Y ++ +A A + AY A A + ++YP + + L+
Sbjct: 151 RYPESAYAPSAQYWIGNAYYAQRDYKNAITAQQALLKKYPDNP--KAADALL 200
Score = 41.3 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 22/122 (18%), Positives = 43/122 (35%), Gaps = 2/122 (1%)
Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
+Q A L + + + + + Y A IG Y + +Y
Sbjct: 120 QSEQSAYDSALALFKAGDYKKSGTAFGDFVQRYPESAYAPSAQY--WIGNAYYAQRDYKN 177
Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
AI Q +L Y D A +A+ + + L A++ + + +YP A+ +
Sbjct: 178 AITAQQALLKKYPDNPKAADALLNIASSQTELKDRAAAKKTLESLVAKYPNAPAAQTAKE 237
Query: 269 LV 270
+
Sbjct: 238 RL 239
>gi|301166057|emb|CBW25631.1| putative lipoprotein [Bacteriovorax marinus SJ]
Length = 255
Score = 44.0 bits (101), Expect = 0.023, Method: Composition-based stats.
Identities = 10/84 (11%), Positives = 31/84 (36%)
Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
+ A +G A F + + + + + L + L ++A
Sbjct: 169 KRRARILHNLGMSAYINKNNNDATVYFSKLFTEFPSSNYNANGLLYLSKTLQRLKKNEQA 228
Query: 247 REVVSLIQERYPQGYWARYVETLV 270
++ + + +R+P+ + ++L+
Sbjct: 229 KQTLEELIKRFPKSKKVKEAKSLL 252
>gi|188994328|ref|YP_001928580.1| hypothetical protein PGN_0464 [Porphyromonas gingivalis ATCC 33277]
gi|188594008|dbj|BAG32983.1| conserved hypothetical protein [Porphyromonas gingivalis ATCC
33277]
Length = 995
Score = 44.0 bits (101), Expect = 0.023, Method: Composition-based stats.
Identities = 35/234 (14%), Positives = 71/234 (30%), Gaps = 16/234 (6%)
Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS--AFVQYSAGKYQ 111
+ + + L + +F A + A L + ++A +Y
Sbjct: 466 EYFPEAYFLRGNLRYRAGDFPAAAADYRAYISAAGDRDAANLPLGYYRLGYSLFNAERYD 525
Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM--------- 162
A +EY+++ + N+ Y M RD + A + +
Sbjct: 526 MALEAFKEYVSRSGIAPNLSADAYARIGDCRYMKRDFHGAREAYSMAYRVYPSGGDYALL 585
Query: 163 -----SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
+ ++Y + L A E G + G++ A F V+
Sbjct: 586 RRARLEGLAKQYADQIQTLDKLIREFPDSRHLTAALYEKGCGAVLSGKHNVAEEAFNAVV 645
Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
D+ A ++ +L Y EA I +RYP+ + ++
Sbjct: 646 KRSPDSREARQSSLQLGLLYYNTGRTKEAIRTYQRIIDRYPRSEETTVALSDLR 699
>gi|220928873|ref|YP_002505782.1| tetratricopeptide TPR_2 [Clostridium cellulolyticum H10]
gi|219999201|gb|ACL75802.1| tetratricopeptide TPR_2 [Clostridium cellulolyticum H10]
Length = 374
Score = 44.0 bits (101), Expect = 0.023, Method: Composition-based stats.
Identities = 20/122 (16%), Positives = 43/122 (35%)
Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
Y Q + I E+ ++ K A + G + +Y A
Sbjct: 250 YGQYKYIEAADKLLAIPEKDLSADNKKKYDSIKANVLKNAANQLTIEGTSLYNKKKYKEA 309
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
I + + V + ++A+ L ++YVA + E + + YP + +Y +
Sbjct: 310 IQKLEKVFTLGTKWSFGDKALYTLGKSYVAANEPQKGAEAYNRLISDYPDSAYVKYARSR 369
Query: 270 VK 271
++
Sbjct: 370 LQ 371
>gi|224370137|ref|YP_002604301.1| putative aspartyl/asparaginyl beta-hydroxylase (Aspartate
beta-hydroxylase) (Peptide-aspartate beta-dioxygenase)
[Desulfobacterium autotrophicum HRM2]
gi|223692854|gb|ACN16137.1| putative aspartyl/asparaginyl beta-hydroxylase (Aspartate
beta-hydroxylase) (Peptide-aspartate beta-dioxygenase)
[Desulfobacterium autotrophicum HRM2]
Length = 286
Score = 44.0 bits (101), Expect = 0.023, Method: Composition-based stats.
Identities = 24/242 (9%), Positives = 61/242 (25%), Gaps = 9/242 (3%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ I + + G + + V + Q ++ K +
Sbjct: 1 MTNKFFFILCLPVLFLVSGCVSTQELSMLENRVAVLESQDS------DRFTRED--KTIK 52
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+ + + + + A + V
Sbjct: 53 EMTLVVNRLESGLEESQRTSREGYAELKSLVEEIKAENQQLTGRMEESEHRFKNVGNQAS 112
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG- 197
+ + + + + V + K +
Sbjct: 113 AGSKTDFVRLDAAVSKNFQRIVALEEYLGFEPSDVKVDAPPVDGEKTVEDTSEKGLYSAA 172
Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
+ L +GE+ A F+ L Y ++++A+ A + E+Y ++A + E Y
Sbjct: 173 KLLLDKGEFEQARKAFEAFLKPYPESDNADNARFWIAESYYREKWYEKAILEYQKVIENY 232
Query: 258 PQ 259
P+
Sbjct: 233 PK 234
Score = 41.7 bits (95), Expect = 0.10, Method: Composition-based stats.
Identities = 19/104 (18%), Positives = 35/104 (33%)
Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
+ + A + I Y + Y AI +Q V+ NY
Sbjct: 180 EFEQARKAFEAFLKPYPESDNADNARFWIAESYYREKWYEKAILEYQKVIENYPKGNKVS 239
Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
A+ + A+ L AR ++ + +++PQ A +K
Sbjct: 240 AALFKQGYAFANLGEKANARLILKELIKKFPQSNEAGIAAEKLK 283
>gi|186477206|ref|YP_001858676.1| tol-pal system protein YbgF [Burkholderia phymatum STM815]
gi|184193665|gb|ACC71630.1| tol-pal system protein YbgF [Burkholderia phymatum STM815]
Length = 249
Score = 44.0 bits (101), Expect = 0.023, Method: Composition-based stats.
Identities = 19/123 (15%), Positives = 40/123 (32%), Gaps = 14/123 (11%)
Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
+ K + RY SPY A++++ G +Y
Sbjct: 137 QQFRSGDFKNAAASFRSFITRYPQSPYQPTAQYWL--------------GNALYALRDYK 182
Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
+ +Q V+ Y A EA+ + + A++ + I +Y A+ +
Sbjct: 183 GSTSVWQGVVQKYPQHPRAPEALLAIANNQLEQGQKAAAKKTLEQIVAQYGGSDVAQSAQ 242
Query: 268 TLV 270
+ +
Sbjct: 243 SKL 245
Score = 39.4 bits (89), Expect = 0.54, Method: Composition-based stats.
Identities = 22/142 (15%), Positives = 39/142 (27%)
Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184
+ +D + V Q K Y S + R + V
Sbjct: 63 DQQNRLDQLNQQVATLRGQNEDLTNQVATLQKQQKDYYSDLDGRLKKFEPQQQTVDGVEG 122
Query: 185 GRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244
+ + G++ A F+ + Y + + A L A AL
Sbjct: 123 TVQPGETEAFNAASQQFRSGDFKNAAASFRSFITRYPQSPYQPTAQYWLGNALYALRDYK 182
Query: 245 EAREVVSLIQERYPQGYWARYV 266
+ V + ++YPQ A
Sbjct: 183 GSTSVWQGVVQKYPQHPRAPEA 204
>gi|322505183|emb|CAM45400.2| putative intraflagellar transport protein IFT88 [Leishmania
braziliensis MHOM/BR/75/M2904]
Length = 810
Score = 44.0 bits (101), Expect = 0.023, Method: Composition-based stats.
Identities = 27/217 (12%), Positives = 63/217 (29%), Gaps = 6/217 (2%)
Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
++ + +Y + K + +A F + + + +
Sbjct: 495 KAKELYNKALAVEADNVEAIYNLGLAAKKLGLYEEAVRTFKRM-QALVDSNEVLYQIADL 553
Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
+ + + L T + +Y G + + M
Sbjct: 554 SDLVGDPSALEWFNRLIGRVPTDPNALARIGSLYARDGDDVQAFHYYLEAYRYYQVNMDV 613
Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE--IGRYYLKRGEYVAAIPRFQLVLA 218
N Y + +F+ Q + + + + +RG+YV A ++ +
Sbjct: 614 ISWLGAYFVKNEVYDRAVQFFERASHIQPQEVKWQLMVASCHRRRGDYVQAKRLYEQLHR 673
Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
Y D E + LV+ L +EA E +++
Sbjct: 674 KYPD---NVECLNYLVQLCKDAGLNEEANEWFKTMKK 707
Score = 39.0 bits (88), Expect = 0.77, Method: Composition-based stats.
Identities = 25/221 (11%), Positives = 62/221 (28%), Gaps = 4/221 (1%)
Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
+ L + + + K ++++ KA E +N+ A +L ++
Sbjct: 461 SGEQYSDLSLGANQYNAKALVNKGNFSFVKKDYDKAKELYNKALAVEADNVEAIYNLGLA 520
Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK-LML 159
A + + + + + + LVG A + + T L
Sbjct: 521 AKKLGLYEEAVRTFKRMQALVDSNEVLYQIADLSDLVGDPSALEWFNRLIGRVPTDPNAL 580
Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219
+ + R + +G Y++K Y A+ F+
Sbjct: 581 ARIGSLYARDGDDVQAFHYYLEAYRYYQVNMDVISWLGAYFVKNEVYDRAVQFFERASHI 640
Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
+ + + +A+ + + +YP
Sbjct: 641 QPQEVKWQ---LMVASCHRRRGDYVQAKRLYEQLHRKYPDN 678
>gi|261879446|ref|ZP_06005873.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
gi|270334015|gb|EFA44801.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
Length = 1122
Score = 44.0 bits (101), Expect = 0.023, Method: Composition-based stats.
Identities = 12/72 (16%), Positives = 22/72 (30%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ K + ++ YS E +E L Y A +S
Sbjct: 584 YNSGVIFKDKLDNLPLSEKALTRIVQQYSTFEKMDEVYYHLFLLYSRKGEPQLAESYISR 643
Query: 253 IQERYPQGYWAR 264
++ YP+ W +
Sbjct: 644 LKSEYPKSQWTQ 655
Score = 37.5 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 32/226 (14%), Positives = 64/226 (28%), Gaps = 7/226 (3%)
Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
+ D+ T++ V K + L + NF +A E + + +
Sbjct: 43 GSLEKENGNKDNFTELIPLYTVGNKNSISLGKGNFDRAIEKAEKAIKLHSIKRRPVWNKR 102
Query: 99 MSA---FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
+++ K + + D+ SY + +
Sbjct: 103 GRKTERDIEWLGRKEYNPFLWKAWMLMGRAQFYQGDFDAASSTFSYMARLYETQPAIYGR 162
Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG--RYYLKRGEYVAAIPRF 213
+E R + A KE + YY+ +Y AIP
Sbjct: 163 AKAWLA-KSYIENNFLYDAEDVIRNMQRDSIHWRAQKEWDYTLADYYIHIQQYEQAIPYL 221
Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEA-REVVSLIQERYP 258
+ V+ + + L + AL EA + +I++ P
Sbjct: 222 KKVIKHEMRKKQKAREYFLLGQLQAALGNHQEAYKAYQKVIRQNPP 267
>gi|89890624|ref|ZP_01202134.1| conserved hypothetical protein, TPR domain [Flavobacteria bacterium
BBFL7]
gi|89517539|gb|EAS20196.1| conserved hypothetical protein, TPR domain [Flavobacteria bacterium
BBFL7]
Length = 1006
Score = 44.0 bits (101), Expect = 0.023, Method: Composition-based stats.
Identities = 24/224 (10%), Positives = 62/224 (27%), Gaps = 17/224 (7%)
Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
+Y + + K ++ K+ E N+ + A + +K+ A Y + A +
Sbjct: 427 ALY-EGLSQFKSGDYKKSIENLNKTIQYAQSADLKKKATFWKAESYYELNDFPAALTAFN 485
Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
+ D + Y + + ++ T Q N Y++
Sbjct: 486 AVKNMSNSIEEDDLLNYDLAYTQFKLKDYTNAINTFTAYTKQSGIDNEPARLNDAYLRIG 545
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP----------------RFQLVLANYSD 222
+ A + AA L ++
Sbjct: 546 DANFVSKQYWPAMEAYNKSISMNGFNADYAAFQKAISYGFVGKNDRKIEDLNGFLNKFNR 605
Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
+ + ++ + L Y+ +D+ + + +P+ +
Sbjct: 606 SAYRDDVLYELGNTYINTNNVDKGIQTYDRLINEFPKSSYTSQA 649
Score = 37.5 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 30/244 (12%), Positives = 64/244 (26%), Gaps = 16/244 (6%)
Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
++ + + ++ + KA + + +F A FN
Sbjct: 443 SIENLNKTIQYAQSADLKKKATFWKAESYYELNDFPAALTAFNAVKNMSNSIEEDDLLNY 502
Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYP----------------ESKNVDYVYYLVGMSYA 142
A+ Q+ Y A + Y Q ++ V Y+ +Y
Sbjct: 503 DLAYTQFKLKDYTNAINTFTAYTKQSGIDNEPARLNDAYLRIGDANFVSKQYWPAMEAYN 562
Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
+ I ++ V + E+G Y+
Sbjct: 563 KSISMNGFNADYAAFQKAISYGFVGKNDRKIEDLNGFLNKFNRSAYRDDVLYELGNTYIN 622
Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
I + ++ + + + +AM R + +D+A V + YP
Sbjct: 623 TNNVDKGIQTYDRLINEFPKSSYTSQAMMRKGLQLYNDSKLDDALVVFKDVVSTYPGTPQ 682
Query: 263 ARYV 266
A
Sbjct: 683 ANEA 686
Score = 35.9 bits (80), Expect = 5.8, Method: Composition-based stats.
Identities = 26/209 (12%), Positives = 58/209 (27%), Gaps = 13/209 (6%)
Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
+ Y+ + K+ +F KA E FN+ L ++++ + + A
Sbjct: 280 DYYQLGYAYYKQGDFEKAIETFNKIVDGENKTAQNAYYHLAQSYIKLNKSEDALNAFKKA 339
Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIR---------DVPYDQRATKLMLQYMSRIVERY 169
+ + + Y + K I +
Sbjct: 340 SEMDFDTQIQQDASYNYAKISYEYGNPYDSVPAVILAYLEKYPDTDKNAEMNEFLIDSYF 399
Query: 170 TNSPYVKGARFYVTVG----RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
++ Y + R + + G K G+Y +I + A+
Sbjct: 400 SSKNYTEALRLMEDGRIAGNEDVYGKVALYEGLSQFKSGDYKKSIENLNKTIQYAQSADL 459
Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQ 254
++A E+Y L A + ++
Sbjct: 460 KKKATFWKAESYYELNDFPAALTAFNAVK 488
>gi|323524836|ref|YP_004226989.1| tol-pal system protein YbgF [Burkholderia sp. CCGE1001]
gi|323381838|gb|ADX53929.1| tol-pal system protein YbgF [Burkholderia sp. CCGE1001]
Length = 249
Score = 44.0 bits (101), Expect = 0.023, Method: Composition-based stats.
Identities = 21/123 (17%), Positives = 42/123 (34%), Gaps = 14/123 (11%)
Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
+ K + +Y NSPY A++++ G +Y
Sbjct: 137 QQFRNGDFKNAAASFRSFISKYPNSPYQPTAQYWL--------------GNALYALRDYK 182
Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
+ +Q V+A Y A EA+ + + AR+ + I +Y A+ +
Sbjct: 183 GSTATWQGVVARYPQHPRAPEALLAIANNQLEQGQKAAARKTLEQILAQYGGSDVAQSAQ 242
Query: 268 TLV 270
+ +
Sbjct: 243 SKL 245
Score = 40.2 bits (91), Expect = 0.32, Method: Composition-based stats.
Identities = 22/142 (15%), Positives = 39/142 (27%)
Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184
+S +D + V Q K Y + + R + V
Sbjct: 63 DQSNRLDQLNQQVATLRGQNEDMGNQLATLQKQQKDYYTDLDTRLKKFEPQQQTVDGVQG 122
Query: 185 GRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244
+ G++ A F+ ++ Y ++ + A L A AL
Sbjct: 123 EVQPGETDAFNAASQQFRNGDFKNAAASFRSFISKYPNSPYQPTAQYWLGNALYALRDYK 182
Query: 245 EAREVVSLIQERYPQGYWARYV 266
+ + RYPQ A
Sbjct: 183 GSTATWQGVVARYPQHPRAPEA 204
>gi|83815402|ref|YP_445160.1| TPR repeat-containing protein [Salinibacter ruber DSM 13855]
gi|83756796|gb|ABC44909.1| Tetratricopeptide repeat family [Salinibacter ruber DSM 13855]
Length = 990
Score = 44.0 bits (101), Expect = 0.023, Method: Composition-based stats.
Identities = 16/94 (17%), Positives = 32/94 (34%)
Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
+ + + A+ + G +A F+ VL D A +A+ L +A
Sbjct: 559 DSISRAEMKDQRAVAQYELANALFRAAGRPDSAQTWFRRVLDETPDHPVAPQALYGLAQA 618
Query: 237 YVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
+ A EV + + +P A+ +
Sbjct: 619 HRAQGDTAAGDEVYRRLIDEHPDTPIAKRAREQL 652
>gi|320102982|ref|YP_004178573.1| tetratricopeptide repeat-containing protein [Isosphaera pallida ATCC
43644]
gi|319750264|gb|ADV62024.1| Tetratricopeptide TPR_1 repeat-containing protein [Isosphaera pallida
ATCC 43644]
Length = 1053
Score = 44.0 bits (101), Expect = 0.024, Method: Composition-based stats.
Identities = 24/226 (10%), Positives = 57/226 (25%), Gaps = 12/226 (5%)
Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
++ + + N + F D +
Sbjct: 826 NDQPPPPPELARQARFRLGEARFRSDNPASCRTVFEALLEDLQ------------SQPDD 873
Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
+ + + L + + P + +
Sbjct: 874 LNQPTNRLLWEVASLRLIQTDILEQRWEAALAAIERLEPSLTDPVRRAEATYAKGRALQG 933
Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
R+ ++ A A ++ +G Y + +Y A+ + V Y
Sbjct: 934 QARFDDARAAYQAVVANPNAGELAARAQLMLGETYFHQKQYEVALREYLKVEVLYDAPVW 993
Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
A+ + + Y L +D AR+ + +R+PQ A ++
Sbjct: 994 QALALYAVAQTYERLNQLDRARQTYDELLKRFPQSDRAVEARVRLE 1039
Score = 41.3 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 31/212 (14%), Positives = 65/212 (30%), Gaps = 15/212 (7%)
Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
A + + A + + P A + L +A + + G + +A
Sbjct: 357 ADAARRLNQLADAEAAYLSIVQTRPDDPFAPDAQLRAAELAFQRGDHLEARRRAAALAVT 416
Query: 124 YPESKNVDYVY-------------YLVGMSYAQMIRDVPYDQRATKLMLQYMSR--IVER 168
+P S + +I + D + ++R +
Sbjct: 417 FPTSSWIPAARLVEARAALASGQAEEAVTILTTLIENAQTDPALARAARYQLARAALAHN 476
Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
+ + T G +AA E+G + G Y A + L + + A +
Sbjct: 477 DPETAFAIWRELGSTEGHPYVAASRYELGVNLYRLGRYDEAADALESYLKAVPETKIASQ 536
Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQG 260
A+A LV A+ ++A + + +P
Sbjct: 537 ALAYLVMAHSRGGRFEQAAATLEQLARLHPNS 568
>gi|330836583|ref|YP_004411224.1| Tetratricopeptide TPR_2 repeat-containing protein [Spirochaeta
coccoides DSM 17374]
gi|329748486|gb|AEC01842.1| Tetratricopeptide TPR_2 repeat-containing protein [Spirochaeta
coccoides DSM 17374]
Length = 229
Score = 44.0 bits (101), Expect = 0.024, Method: Composition-based stats.
Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Query: 212 RFQLVLANY-SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
++Q+V +Y D A A+ Y +D AR V + + YP +AR + +
Sbjct: 167 QYQMVADSYGQDIAVAPRALFGEARIYEKTGDIDLARAVFQELADAYPSSEFARIAQNRL 226
>gi|302338568|ref|YP_003803774.1| hypotheticalprotein [Spirochaeta smaragdinae DSM 11293]
gi|301635753|gb|ADK81180.1| TPR repeat-containing protein [Spirochaeta smaragdinae DSM 11293]
Length = 227
Score = 44.0 bits (101), Expect = 0.024, Method: Composition-based stats.
Identities = 11/104 (10%), Positives = 29/104 (27%), Gaps = 1/104 (0%)
Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA-EHA 226
++ ++ + + G A+ +Q V Y + A
Sbjct: 118 QWDDAQKDFAELAKEYPKSYLAPVALMNQATALEEAGNNKEAVEIYQKVFDTYKETSPDA 177
Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
A+ + Y + A + + + +P W + +
Sbjct: 178 PRALFSIARLYETTGQKEAALDAYREVADSFPDSDWTKLSRDRI 221
>gi|78356623|ref|YP_388072.1| TPR domain-containing protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78219028|gb|ABB38377.1| TPR domain protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 263
Score = 44.0 bits (101), Expect = 0.024, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 29/78 (37%)
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+G Y Y AI F+ V+ NY E A AM + AY L AR + +
Sbjct: 184 YWLGETYYHEKRYAEAILTFKEVVRNYPKHEKAAAAMLKTGYAYEMLGDKSNARFYLQTL 243
Query: 254 QERYPQGYWARYVETLVK 271
+ Y A +K
Sbjct: 244 VDEYSASEPAALARKRLK 261
Score = 40.5 bits (92), Expect = 0.22, Method: Composition-based stats.
Identities = 12/69 (17%), Positives = 22/69 (31%), Gaps = 2/69 (2%)
Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
+ + LA++ + A A L E Y EA + YP+
Sbjct: 156 NEDVKTGRSILEAFLADFPKSGLAPNASYWLGETYYHEKRYAEAILTFKEVVRNYPKHE- 214
Query: 263 ARYVETLVK 271
+ ++K
Sbjct: 215 -KAAAAMLK 222
>gi|258405687|ref|YP_003198429.1| Tetratricopeptide TPR_2 repeat-containing protein [Desulfohalobium
retbaense DSM 5692]
gi|257797914|gb|ACV68851.1| Tetratricopeptide TPR_2 repeat protein [Desulfohalobium retbaense
DSM 5692]
Length = 339
Score = 44.0 bits (101), Expect = 0.025, Method: Composition-based stats.
Identities = 22/189 (11%), Positives = 52/189 (27%), Gaps = 5/189 (2%)
Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
+ + + A + + ++ + + +Y
Sbjct: 28 LQTRFDSVLTSYQGQRYLEEHEYALGVEDLSHRLKQQPDNGAAAYWLGRLYLAQEHPSKA 87
Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE--VEIGRYYL 201
+ + + + V + + K Y + + V +G +Y+
Sbjct: 88 LPALQKAVELKPQYADAHFWLGVAHWAMMDFEKERLAYERALALEPDHTQARVYLGHHYV 147
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
R ++ A+ ++ VL A+ E L AR+ +RYP G
Sbjct: 148 DREQWSLALIHYRRVLDEEPGHPS---ALFYTAECLEQLGREQSARQAWKAYLDRYPDGG 204
Query: 262 WARYVETLV 270
A +
Sbjct: 205 RALEATRRL 213
>gi|187922762|ref|YP_001894404.1| tol-pal system protein YbgF [Burkholderia phytofirmans PsJN]
gi|187713956|gb|ACD15180.1| tol-pal system protein YbgF [Burkholderia phytofirmans PsJN]
Length = 252
Score = 44.0 bits (101), Expect = 0.025, Method: Composition-based stats.
Identities = 18/123 (14%), Positives = 41/123 (33%), Gaps = 14/123 (11%)
Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
+ K + ++ NSPY A++++ G +Y
Sbjct: 140 QQFRNGDFKNAAASFRTFIAKFPNSPYQPTAQYWL--------------GNALYALRDYK 185
Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
+ +Q V+ Y A EA+ + + A++ + I +Y A+ +
Sbjct: 186 GSTATWQGVVQKYPQHPRAPEALLAIANNQLEQGQKAAAKKTLEQIVAQYGGSDVAQSAQ 245
Query: 268 TLV 270
+ +
Sbjct: 246 SKL 248
Score = 39.0 bits (88), Expect = 0.75, Method: Composition-based stats.
Identities = 21/142 (14%), Positives = 40/142 (28%)
Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184
+S +D + V Q K Y + + R + V
Sbjct: 66 DQSNRLDQLNQQVATLRGQNEDMANQLATVQKQQKDYYTDLDTRLKKFEPQQQTVDGVQG 125
Query: 185 GRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244
+ G++ A F+ +A + ++ + A L A AL
Sbjct: 126 EVQPGETDSFNAASQQFRNGDFKNAAASFRTFIAKFPNSPYQPTAQYWLGNALYALRDYK 185
Query: 245 EAREVVSLIQERYPQGYWARYV 266
+ + ++YPQ A
Sbjct: 186 GSTATWQGVVQKYPQHPRAPEA 207
>gi|194098694|ref|YP_002001756.1| hypothetical protein NGK_1131 [Neisseria gonorrhoeae NCCP11945]
gi|239998999|ref|ZP_04718923.1| hypothetical protein Ngon3_05900 [Neisseria gonorrhoeae 35/02]
gi|240112986|ref|ZP_04727476.1| hypothetical protein NgonM_05321 [Neisseria gonorrhoeae MS11]
gi|254493790|ref|ZP_05106961.1| periplasmic protein [Neisseria gonorrhoeae 1291]
gi|268594847|ref|ZP_06129014.1| periplasmic protein [Neisseria gonorrhoeae 35/02]
gi|268599065|ref|ZP_06133232.1| periplasmic protein [Neisseria gonorrhoeae MS11]
gi|193933984|gb|ACF29808.1| Conserved hypothetical protein [Neisseria gonorrhoeae NCCP11945]
gi|226512830|gb|EEH62175.1| periplasmic protein [Neisseria gonorrhoeae 1291]
gi|268548236|gb|EEZ43654.1| periplasmic protein [Neisseria gonorrhoeae 35/02]
gi|268583196|gb|EEZ47872.1| periplasmic protein [Neisseria gonorrhoeae MS11]
gi|317164292|gb|ADV07833.1| hypothetical protein NGTW08_0865 [Neisseria gonorrhoeae
TCDC-NG08107]
Length = 237
Score = 44.0 bits (101), Expect = 0.025, Method: Composition-based stats.
Identities = 12/72 (16%), Positives = 23/72 (31%)
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
+ + + G + I + D+ A E + ++ E L D AR
Sbjct: 154 QRSMYLLLQSRARMGNCESVIEIGGRYANRFKDSPTAPEVIFKIGECQYRLQQKDIARAT 213
Query: 250 VSLIQERYPQGY 261
+ + YP
Sbjct: 214 WRSLIQTYPGSP 225
>gi|95929134|ref|ZP_01311878.1| N-acetylmuramoyl-L-alanine amidase [Desulfuromonas acetoxidans DSM
684]
gi|95134632|gb|EAT16287.1| N-acetylmuramoyl-L-alanine amidase [Desulfuromonas acetoxidans DSM
684]
Length = 582
Score = 44.0 bits (101), Expect = 0.025, Method: Composition-based stats.
Identities = 21/142 (14%), Positives = 44/142 (30%), Gaps = 8/142 (5%)
Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
DY + + + V+++ + GA + + +L
Sbjct: 28 QDYRDARYAYQQLLRAPQKQQYRHHWDKVFTQLQHFVDQHPDHEKAPGAYYLLGQSHEKL 87
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY-VALALMDEARE 248
+ + AA+ +Q + Y + A++A+ L AR
Sbjct: 88 Y-------EISRVKKDARAAVDYYQSLARRYPSSSLADDALLFSARLQCEVLGAEQAARN 140
Query: 249 VVSLIQERYPQGYWARYVETLV 270
+I +RYP G + L+
Sbjct: 141 DCQVILQRYPSGDMHKRARELL 162
Score = 42.5 bits (97), Expect = 0.069, Method: Composition-based stats.
Identities = 16/113 (14%), Positives = 33/113 (29%), Gaps = 8/113 (7%)
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV-EIGRYYLKRGEYVAAIPRFQLVLANY 220
++ + V A + A +++ + R + + Q + +
Sbjct: 8 FLILLFVFFAVSSVSQASVLQDYRDARYAYQQLLRAPQKQQYRHHWDKVFTQLQHFVDQH 67
Query: 221 SDAEHAEEAMARLVEAYVAL-------ALMDEAREVVSLIQERYPQGYWARYV 266
D E A A L +++ L A + + RYP A
Sbjct: 68 PDHEKAPGAYYLLGQSHEKLYEISRVKKDARAAVDYYQSLARRYPSSSLADDA 120
>gi|322500184|emb|CBZ35261.1| unnamed protein product [Leishmania donovani BPK282A1]
Length = 811
Score = 44.0 bits (101), Expect = 0.025, Method: Composition-based stats.
Identities = 30/213 (14%), Positives = 61/213 (28%), Gaps = 6/213 (2%)
Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
++ + +Y + K + +A F + + V + +
Sbjct: 495 KAKELYNKALAVEADNVEAIYNLGLAAKKLGLYEEAVRMFKRVQALVDSSEVLYQIADL- 553
Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
+ + + L T + +Y G + + M
Sbjct: 554 SDLVGDPAALEWFNRLIGRVPTDPNALARIGSLYARDGDDVQAFHYYLEAYRYYQVNMDV 613
Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE--IGRYYLKRGEYVAAIPRFQLVLA 218
N Y K +F+ Q + + + + +RG+YV A ++ V
Sbjct: 614 ISWLGAYFVKNEVYDKAVQFFERASHIQPQEVKWQLMVASCHRRRGDYVQAKRLYEQVHR 673
Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
Y D E + LV+ L +EA E
Sbjct: 674 KYPDNI---ECLNYLVQLCKDAGLNEEANEWFK 703
Score = 36.7 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 26/221 (11%), Positives = 63/221 (28%), Gaps = 4/221 (1%)
Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
+ L V + + + K ++++ KA E +N+ A +L ++
Sbjct: 461 NGEQYSDLSLVANQYNAKALVNKGNFSFVKKDYDKAKELYNKALAVEADNVEAIYNLGLA 520
Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK-LML 159
A + + + + + + LVG A + + T L
Sbjct: 521 AKKLGLYEEAVRMFKRVQALVDSSEVLYQIADLSDLVGDPAALEWFNRLIGRVPTDPNAL 580
Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219
+ + R + +G Y++K Y A+ F+
Sbjct: 581 ARIGSLYARDGDDVQAFHYYLEAYRYYQVNMDVISWLGAYFVKNEVYDKAVQFFERASHI 640
Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
+ + + +A+ + + +YP
Sbjct: 641 QPQEVKWQ---LMVASCHRRRGDYVQAKRLYEQVHRKYPDN 678
>gi|189347955|ref|YP_001944484.1| lipoprotein [Chlorobium limicola DSM 245]
gi|189342102|gb|ACD91505.1| putative lipoprotein [Chlorobium limicola DSM 245]
Length = 287
Score = 44.0 bits (101), Expect = 0.025, Method: Composition-based stats.
Identities = 29/206 (14%), Positives = 69/206 (33%), Gaps = 2/206 (0%)
Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
++ A + K + + A + +++ + P + AR++ A + +
Sbjct: 63 EDDVLFLLAQSYYKSEQYLLAVDMYSRLLQQVPSSPFARQAQFQLAKSHEQLSTHFELDH 122
Query: 116 LG--EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
+ + + A M R++ A + + +
Sbjct: 123 EHTLKAIQQFALYLEVYPGRDSAQITADADMYRELLKVNPANESYKERYANFQSELEGVE 182
Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
A+ + R +LA I R Y++ +Y A+ F V+ Y D + E+A
Sbjct: 183 SQDYAQKAIVKLREKLAKNTYYIARQYIQLKKYKASGIYFDEVIKRYPDTIYFEQAWKGR 242
Query: 234 VEAYVALALMDEAREVVSLIQERYPQ 259
++ + +A + V + +P
Sbjct: 243 IDVLIKRKKWFDASQAVDRYLQLFPD 268
>gi|313206826|ref|YP_004046003.1| outer membrane assembly lipoprotein yfio [Riemerella anatipestifer
DSM 15868]
gi|312446142|gb|ADQ82497.1| outer membrane assembly lipoprotein YfiO [Riemerella anatipestifer
DSM 15868]
gi|325335735|gb|ADZ12009.1| YfiO [Riemerella anatipestifer RA-GD]
Length = 294
Score = 43.6 bits (100), Expect = 0.025, Method: Composition-based stats.
Identities = 45/222 (20%), Positives = 82/222 (36%), Gaps = 12/222 (5%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
+ A ++ + +A + + A L SA+ Y +Y+ A +++
Sbjct: 35 KTANEMYTKKKWKEALSLYERVQNLISGTDEASDILFKSAYANYYDKQYRIAGHQFKKFS 94
Query: 122 TQYP--ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
+ Y+ + Y Q D DQ+ T+L + + + Y NS K
Sbjct: 95 VNSALATDPRKEEAAYMSAICYYQGSMDYNLDQKDTELAINELQSFLNNYPNSERAKNIN 154
Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
+ +L K E R Y K E +AI F+ VL ++ + + L++A
Sbjct: 155 ELIDELSYKLEFKAYENARQYYKMLELKSAIISFENVLDDFPSTKLRPKIETMLMDAKAK 214
Query: 240 LALMDE----------AREVVSLIQERYPQGYWARYVETLVK 271
LA+ + A L+++ YP A+ TL K
Sbjct: 215 LAIDSKFELKRERLEHAVAYTHLMEKNYPDTDIAKTAVTLRK 256
>gi|94311605|ref|YP_584815.1| TPR repeat-containing protein [Cupriavidus metallidurans CH34]
gi|93355457|gb|ABF09546.1| conserved hypothetical protein; putative exported protein
[Cupriavidus metallidurans CH34]
Length = 252
Score = 43.6 bits (100), Expect = 0.025, Method: Composition-based stats.
Identities = 17/124 (13%), Positives = 41/124 (33%), Gaps = 2/124 (1%)
Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
P ++ L+ + + + A+ Y LA + +G + +Y
Sbjct: 128 QPTEKPEYDAALKQFQSGDFKGAGNAFSAFAKKYPQSPYLPLA--QFWLGNSLYAQRDYK 185
Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
+ ++ N+ A +AM + A++ + + +YP A+
Sbjct: 186 GSTYVLDTMVKNFPTHPKAPDAMIAIANNQFESGQKAAAKKTLEAVVAKYPGTEGAQAAS 245
Query: 268 TLVK 271
+K
Sbjct: 246 NRLK 249
Score = 37.9 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 9/93 (9%), Positives = 30/93 (32%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
++ Y+ A+ + +F A F+ ++ +P + + Y+
Sbjct: 124 EGIAQPTEKPEYDAALKQFQSGDFKGAGNAFSAFAKKYPQSPYLPLAQFWLGNSLYAQRD 183
Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
Y+ + + + + +P + +
Sbjct: 184 YKGSTYVLDTMVKNFPTHPKAPDAMIAIANNQF 216
Score = 37.5 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 13/104 (12%), Positives = 28/104 (26%)
Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
K Y + + R + E + + G++ A F
Sbjct: 96 QKQQKDYYADLDARLKKFEPQQVTVEGREGIAQPTEKPEYDAALKQFQSGDFKGAGNAFS 155
Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
Y + + A L + A + V+ + + +P
Sbjct: 156 AFAKKYPQSPYLPLAQFWLGNSLYAQRDYKGSTYVLDTMVKNFP 199
>gi|218780988|ref|YP_002432306.1| tol-pal system protein YbgF [Desulfatibacillum alkenivorans AK-01]
gi|218762372|gb|ACL04838.1| tol-pal system protein YbgF [Desulfatibacillum alkenivorans AK-01]
Length = 302
Score = 43.6 bits (100), Expect = 0.026, Method: Composition-based stats.
Identities = 17/120 (14%), Positives = 41/120 (34%), Gaps = 2/120 (1%)
Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
+ +A + + + + + A +G + K Y AI
Sbjct: 182 EDQAYAQAKKDFDEMRLEKAREGFKNFLARFPNSSKADNA--LFWMGETFFKEKWYEKAI 239
Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
++Q V+ + A A + A+ L AR + + + +++P A + + +
Sbjct: 240 LQYQDVIEKHPKANKVPAAYFKQGLAFSMLGDNSNARLIWTELIKKFPNSAEAGWAQKKL 299
Score = 37.5 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 17/96 (17%), Positives = 33/96 (34%)
Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
+ + + Y +A E KA E F FP + A +L
Sbjct: 167 QTEAQTAPVPAKELDEDQAYAQAKKDFDEMRLEKAREGFKNFLARFPNSSKADNALFWMG 226
Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
+ Y++A ++ I ++P++ V Y+
Sbjct: 227 ETFFKEKWYEKAILQYQDVIEKHPKANKVPAAYFKQ 262
>gi|167563921|ref|ZP_02356837.1| hypothetical protein BoklE_15300 [Burkholderia oklahomensis EO147]
gi|167571056|ref|ZP_02363930.1| hypothetical protein BoklC_14510 [Burkholderia oklahomensis C6786]
Length = 249
Score = 43.6 bits (100), Expect = 0.026, Method: Composition-based stats.
Identities = 18/111 (16%), Positives = 31/111 (27%)
Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
+ +Y + + R K V + G + A F+
Sbjct: 94 RQQKEYYTDLDARLKKFEPQKTTVDGVEGTVQPGETDAFNAASQQFRNGNFKGAAASFRA 153
Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
+A Y + + A L A AL + + + YPQ A
Sbjct: 154 FIAKYPQSPYQPTAQYWLGNAQYALRDYKGSTATWQGLVKNYPQHPRAADA 204
Score = 41.7 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 16/123 (13%), Positives = 40/123 (32%), Gaps = 14/123 (11%)
Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
+ K + +Y SPY A++++ G +Y
Sbjct: 137 QQFRNGNFKGAAASFRAFIAKYPQSPYQPTAQYWL--------------GNAQYALRDYK 182
Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
+ +Q ++ NY A +A+ + + A++ + ++P A +
Sbjct: 183 GSTATWQGLVKNYPQHPRAADALIAIGTNQLEQGQKAAAKKTFEQVVSQFPGSNAAETAQ 242
Query: 268 TLV 270
+ +
Sbjct: 243 SKL 245
>gi|218961350|ref|YP_001741125.1| hypothetical protein; putative signal peptide [Candidatus
Cloacamonas acidaminovorans]
gi|167730007|emb|CAO80919.1| hypothetical protein; putative signal peptide [Candidatus
Cloacamonas acidaminovorans]
Length = 976
Score = 43.6 bits (100), Expect = 0.026, Method: Composition-based stats.
Identities = 29/207 (14%), Positives = 62/207 (29%), Gaps = 25/207 (12%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
++ Y + +++N+++A Q + + + A Y AG
Sbjct: 348 PNELMKAELYYTLGYFYFQQKNYTEAIRQLGQARNYETSRELNSRIDFLIAEAFYFAGNS 407
Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
A Y+++YP D Y+ +G + ++ ++ Y
Sbjct: 408 NLAKDAFNRYLSRYPSGNKADKAYFYLGYL--------SFQEKDYTEAKNNFQELINLYP 459
Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
S Y A +Y+ LA + + L Y E
Sbjct: 460 ESFYCNEALYYLAEMDFYLANYNLA-----------------LKKYLYLYEKNPENEVIA 502
Query: 231 ARLVEAYVALALMDEAREVVSLIQERY 257
R+ + Y + D++ + + Y
Sbjct: 503 LRIAQIYFYIGDYDQSENFLQNLVPNY 529
Score = 38.6 bits (87), Expect = 0.94, Method: Composition-based stats.
Identities = 20/212 (9%), Positives = 57/212 (26%), Gaps = 2/212 (0%)
Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA--RKS 96
+ + +++ +Y A + N++ A + + P V R +
Sbjct: 447 AKNNFQELINLYPESFYCNEALYYLAEMDFYLANYNLALKKYLYLYEKNPENEVIALRIA 506
Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
+ Y + + I + + Y + + D
Sbjct: 507 QIYFYIGDYDQSENFLQNLVPNYDICLLKGNIMLAKKNYSPALEQFLLAEGFATDNVRKI 566
Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
Y + + + ++ + + +Y A+ +
Sbjct: 567 EAQSYRALCLYQMKRFKDASTLYLKLSREKESPDTYLFLAAKSAYAARDYHLALELYNNF 626
Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEARE 248
+ Y ++ H EA+ + Y + + A +
Sbjct: 627 IDKYPESSHFLEALTDIANTYYNMGNYERAVD 658
>gi|90023206|ref|YP_529033.1| coenzyme A biosynthesis protein [Saccharophagus degradans 2-40]
gi|89952806|gb|ABD82821.1| Tetratricopeptide region [Saccharophagus degradans 2-40]
Length = 957
Score = 43.6 bits (100), Expect = 0.026, Method: Composition-based stats.
Identities = 28/229 (12%), Positives = 66/229 (28%), Gaps = 10/229 (4%)
Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
+A+ F ++ +VY + + L+L+++ + + + + + FP
Sbjct: 254 IVAIVFSYIDGAETITEVYNNLGQRHYQYMLYMQLGDLYLEKRRYRDSADTYRHYVKHFP 313
Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
A + + V + EEY+ Y +
Sbjct: 314 TTNQAPDFSVKAIEVYNLGNFPSEILPAKEEYVQNYG---------INSEFWAQRSEEQR 364
Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
+ + ++ +S + A + R + E+ + Y+
Sbjct: 365 APLKPYLRQYIEELSSYYHSRAQALVTADAEYKRLKARGEKPE-RGELVKPDDALPVYLK 423
Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
A + + + E E + EAY EA + + Y
Sbjct: 424 AADFYNQFVRTFPQDEKTPEMAFLMGEAYFEAGYYPEAADAYEAVAYDY 472
Score = 39.0 bits (88), Expect = 0.71, Method: Composition-based stats.
Identities = 11/63 (17%), Positives = 23/63 (36%)
Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
+ D E + +L +AY +DE+ +V+ + +P+ +A
Sbjct: 104 TMYQELLELNKARQGVDDTPTNERILYQLSKAYALDGKLDESNQVLGALVSDHPESDYAA 163
Query: 265 YVE 267
E
Sbjct: 164 EAE 166
>gi|146090777|ref|XP_001466347.1| intraflagellar transport protein IFT88 [Leishmania infantum JPCM5]
gi|134070709|emb|CAM69062.1| putative intraflagellar transport protein IFT88 [Leishmania
infantum JPCM5]
Length = 811
Score = 43.6 bits (100), Expect = 0.027, Method: Composition-based stats.
Identities = 30/213 (14%), Positives = 61/213 (28%), Gaps = 6/213 (2%)
Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
++ + +Y + K + +A F + + V + +
Sbjct: 495 KAKELYNKALAVEADNVEAIYNLGLAAKKLGLYEEAVRMFKRVQALVDSSEVLYQIADL- 553
Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
+ + + L T + +Y G + + M
Sbjct: 554 SDLVGDPAALEWFNRLIGRVPTDPNALARIGSLYARDGDDVQAFHYYLEAYRYYQVNMDV 613
Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE--IGRYYLKRGEYVAAIPRFQLVLA 218
N Y K +F+ Q + + + + +RG+YV A ++ V
Sbjct: 614 ISWLGAYFVKNEVYDKAVQFFERASHIQPQEVKWQLMVASCHRRRGDYVQAKRLYEQVHR 673
Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
Y D E + LV+ L +EA E
Sbjct: 674 KYPDNI---ECLNYLVQLCKDAGLNEEANEWFK 703
Score = 36.7 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 25/221 (11%), Positives = 63/221 (28%), Gaps = 4/221 (1%)
Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
+ L + + + + K ++++ KA E +N+ A +L ++
Sbjct: 461 NGEQYSDLSLIANQYNAKALVNKGNFSFVKKDYDKAKELYNKALAVEADNVEAIYNLGLA 520
Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK-LML 159
A + + + + + + LVG A + + T L
Sbjct: 521 AKKLGLYEEAVRMFKRVQALVDSSEVLYQIADLSDLVGDPAALEWFNRLIGRVPTDPNAL 580
Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219
+ + R + +G Y++K Y A+ F+
Sbjct: 581 ARIGSLYARDGDDVQAFHYYLEAYRYYQVNMDVISWLGAYFVKNEVYDKAVQFFERASHI 640
Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
+ + + +A+ + + +YP
Sbjct: 641 QPQEVKWQ---LMVASCHRRRGDYVQAKRLYEQVHRKYPDN 678
>gi|189423182|ref|YP_001950359.1| hypothetical protein Glov_0102 [Geobacter lovleyi SZ]
gi|189419441|gb|ACD93839.1| conserved hypothetical protein [Geobacter lovleyi SZ]
Length = 152
Score = 43.6 bits (100), Expect = 0.027, Method: Composition-based stats.
Identities = 13/75 (17%), Positives = 25/75 (33%), Gaps = 3/75 (4%)
Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA-YVALALMDEAREVVSLIQERYP 258
+ + AA F ++ Y + A EA+ + Y+ + + + YP
Sbjct: 77 RFNQPDRPAACDCFSSIIDRYPASPQAPEALYLNGVSRYIETHDVANLVAIYDRLAAGYP 136
Query: 259 QGYWARYV--ETLVK 271
W L+K
Sbjct: 137 DSPWLTRADPYRLLK 151
>gi|146306311|ref|YP_001186776.1| TPR repeat-containing protein [Pseudomonas mendocina ymp]
gi|145574512|gb|ABP84044.1| Tetratricopeptide TPR_2 repeat protein [Pseudomonas mendocina ymp]
Length = 270
Score = 43.6 bits (100), Expect = 0.027, Method: Composition-based stats.
Identities = 20/111 (18%), Positives = 39/111 (35%), Gaps = 1/111 (0%)
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI-GRYYLKRGEYVAAIPRFQLVLANY 220
I + + F +Q A G L +G+ AA F V Y
Sbjct: 158 FDLIKAKDFDKASQAFTAFLNRYPNSQYAGNAQYWLGEVNLAKGDLQAAGQAFAKVSQAY 217
Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+++ +L + L D+AR ++ + +YP A+ + ++
Sbjct: 218 PSHAKVPDSLFKLADVERRLGNNDKARGILQQVIAQYPGSSAAQLAQRDLQ 268
Score = 37.1 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 13/67 (19%), Positives = 27/67 (40%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ +K ++ A F L Y ++++A A L E +A + A + +
Sbjct: 153 YYDAAFDLIKAKDFDKASQAFTAFLNRYPNSQYAGNAQYWLGEVNLAKGDLQAAGQAFAK 212
Query: 253 IQERYPQ 259
+ + YP
Sbjct: 213 VSQAYPS 219
Score = 36.7 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 17/83 (20%), Positives = 29/83 (34%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
D ++ Y+ A +K ++F KA + F +P + A + V + G
Sbjct: 143 EPGDPAKEKLYYDAAFDLIKAKDFDKASQAFTAFLNRYPNSQYAGNAQYWLGEVNLAKGD 202
Query: 110 YQQAASLGEEYITQYPESKNVDY 132
Q A + YP V
Sbjct: 203 LQAAGQAFAKVSQAYPSHAKVPD 225
>gi|85858724|ref|YP_460926.1| TPR repeat-containing protein [Syntrophus aciditrophicus SB]
gi|85721815|gb|ABC76758.1| tetratricopeptide repeat family protein [Syntrophus aciditrophicus
SB]
Length = 563
Score = 43.6 bits (100), Expect = 0.027, Method: Composition-based stats.
Identities = 26/246 (10%), Positives = 54/246 (21%), Gaps = 8/246 (3%)
Query: 19 LYKFALTIFFSIAVCFLVGWER--QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76
+Y+ + I V + S Y VL + A
Sbjct: 1 MYRIIVRILLVFVFLAAVSCTQVRLKSGKEISGRDPSSYTAGYHYTLGVLSALDGRLDDA 60
Query: 77 YEYFNQCSRDFPFAGVARKSLLM-SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
+ R P + K L + +Y
Sbjct: 61 IQELETALRHDPLSSHLMKELASLYVEKGDFRRAVDLCKESLVHDPDDVDVHLILGNLYI 120
Query: 136 LVGMSYAQMIRDVPYDQRATKL--MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
+ + + K Y+ + + +
Sbjct: 121 NMKDYKNAIRSYRKVIEIDPKNTSAYLYLGTLYAETERYDKAVDMYSLLLKNDHDNVMGT 180
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+ + ++ A F+ L E A+ L Y +++A +
Sbjct: 181 YYMAKVLVELRRESEAEQYFKKTLLLKP---SLESALIDLALLYERQKKLEQAVNIYKDF 237
Query: 254 QERYPQ 259
+RYP+
Sbjct: 238 IQRYPE 243
>gi|312115988|ref|YP_004013584.1| tol-pal system protein YbgF [Rhodomicrobium vannielii ATCC 17100]
gi|311221117|gb|ADP72485.1| tol-pal system protein YbgF [Rhodomicrobium vannielii ATCC 17100]
Length = 308
Score = 43.6 bits (100), Expect = 0.027, Method: Composition-based stats.
Identities = 23/109 (21%), Positives = 34/109 (31%), Gaps = 5/109 (4%)
Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQL-----AAKEVEIGRYYLKRGEYVAAIPR 212
+ Y ++ V +G GEY A R
Sbjct: 183 ARALFEQGTGALNRREYSAAETYFQQVVDQYPSDPVAGPAYYWLGETAFVSGEYRTAADR 242
Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
F Y + E A EA+ +L + L A + + +Q RYPQG
Sbjct: 243 FLKTFTAYPNTERAPEALLKLAISLRRLGEKAAACDSFAELQRRYPQGP 291
>gi|307823679|ref|ZP_07653907.1| tol-pal system protein YbgF [Methylobacter tundripaludum SV96]
gi|307734973|gb|EFO05822.1| tol-pal system protein YbgF [Methylobacter tundripaludum SV96]
Length = 285
Score = 43.6 bits (100), Expect = 0.027, Method: Composition-based stats.
Identities = 16/121 (13%), Positives = 37/121 (30%), Gaps = 14/121 (11%)
Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
+ + ++ + Y A++++ G
Sbjct: 161 KQQYQQAYEALRNGHNAQAIAEFNTLLGKNPKGEYANNAQYWL--------------GEA 206
Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
Y + +A F V+ NY + +A+ +L V +ARE ++ + +P
Sbjct: 207 YRVNQDIDSARKAFSGVIENYPGSSKVPDALLKLGTIEVEQKNPVKAREYLTRVTVDFPS 266
Query: 260 G 260
Sbjct: 267 S 267
>gi|197119877|ref|YP_002140304.1| TPR domain-containing protein [Geobacter bemidjiensis Bem]
gi|197089237|gb|ACH40508.1| TPR domain lipoprotein [Geobacter bemidjiensis Bem]
Length = 283
Score = 43.6 bits (100), Expect = 0.027, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 36/93 (38%)
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
N A + IG Y ++ A+ F+ V+ NY + + A AM + A+
Sbjct: 189 FLEHHPKHNLAANAQYWIGESYYSEKKFENAVLEFENVIKNYPNKDKAPAAMLKQGMAFR 248
Query: 239 ALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
L A ++ + E +P+ A+ K
Sbjct: 249 ELGDSKSANYILKKLVEEHPKSEEAKIAREKYK 281
Score = 40.5 bits (92), Expect = 0.26, Method: Composition-based stats.
Identities = 21/104 (20%), Positives = 36/104 (34%)
Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
+ + + +Y+K +KE N KA E F+ P +A +
Sbjct: 147 KGVEEQAKKEAELQQAPEYLYQKGYEAMKEGNLPKARELFSSFLEHHPKHNLAANAQYWI 206
Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
YS K++ A E I YP GM++ ++
Sbjct: 207 GESYYSEKKFENAVLEFENVIKNYPNKDKAPAAMLKQGMAFREL 250
Score = 36.7 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 26/231 (11%), Positives = 58/231 (25%), Gaps = 8/231 (3%)
Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
S+ + G QS + +++ + EK + +
Sbjct: 10 SLVLLAFFGCASQSELESVRRDSDEMKNRLFTMEKGLN--------ETRAEVRDGVEKSL 61
Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
L S + + T ++ + V +
Sbjct: 62 AGYRQSLESLQSDMSGFQKEMTGIRKGGADLQATLESARVDMQLLTGKVDDVRILAQKPA 121
Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
+ + + ++ + ER + Q + G +K G
Sbjct: 122 DDIALLKEDLTKRLAALEERMAKMEKGVEEQAKKEAELQQAPEYLYQKGYEAMKEGNLPK 181
Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
A F L ++ A A + E+Y + + A + + YP
Sbjct: 182 ARELFSSFLEHHPKHNLAANAQYWIGESYYSEKKFENAVLEFENVIKNYPN 232
>gi|322492931|emb|CBZ28212.1| putative intraflagellar transport protein IFT88 [Leishmania
mexicana MHOM/GT/2001/U1103]
Length = 811
Score = 43.6 bits (100), Expect = 0.028, Method: Composition-based stats.
Identities = 29/213 (13%), Positives = 60/213 (28%), Gaps = 6/213 (2%)
Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
++ + +Y + K + +A F + + V + +
Sbjct: 495 KAKELYNKALAVEADNVEAIYNLGLAAKKLGLYEEAVRMFKRVQALVDSSEVLYQIADL- 553
Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
+ + + L T + +Y G + + M
Sbjct: 554 SDLVGDPSALEWFNRLIGRVPTDPNALARIGSLYARDGDDVQAFHYYLEAYRYYQVNMDV 613
Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE--IGRYYLKRGEYVAAIPRFQLVLA 218
N Y K +F+ Q + + + + +RG+Y A ++ V
Sbjct: 614 ISWLGAYFVKNEVYDKAVQFFERASHIQPQEVKWQLMVASCHRRRGDYAQAKLLYEQVHR 673
Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
Y D E + LV+ L +EA E
Sbjct: 674 KYPDNI---ECLNYLVQLCKDAGLNEEANEWFK 703
Score = 36.3 bits (81), Expect = 4.4, Method: Composition-based stats.
Identities = 29/228 (12%), Positives = 66/228 (28%), Gaps = 4/228 (1%)
Query: 34 FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93
FL G + L V + + + K ++++ KA E +N+ A
Sbjct: 454 FLEGDYENGEQYSDLSLVANQYNAKALVNKGNFSFVKKDYEKAKELYNKALAVEADNVEA 513
Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153
+L ++A + + + + + + LVG A + +
Sbjct: 514 IYNLGLAAKKLGLYEEAVRMFKRVQALVDSSEVLYQIADLSDLVGDPSALEWFNRLIGRV 573
Query: 154 ATK-LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
T L + + R + +G Y++K Y A+
Sbjct: 574 PTDPNALARIGSLYARDGDDVQAFHYYLEAYRYYQVNMDVISWLGAYFVKNEVYDKAVQF 633
Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
F+ + + + +A+ + + +YP
Sbjct: 634 FERASHIQPQEVKWQ---LMVASCHRRRGDYAQAKLLYEQVHRKYPDN 678
>gi|300871725|ref|YP_003786598.1| putative cAMP-binding protein [Brachyspira pilosicoli 95/1000]
gi|300689426|gb|ADK32097.1| putative cAMP binding protein [Brachyspira pilosicoli 95/1000]
Length = 335
Score = 43.6 bits (100), Expect = 0.028, Method: Composition-based stats.
Identities = 16/230 (6%), Positives = 60/230 (26%), Gaps = 19/230 (8%)
Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
+Y + K + + A + + + V ++
Sbjct: 118 ENTIDEEGPSPLEGLYNIGEFYFKAKKYKNALYAYKRYIQSADEDSVFYHTVEQRIKECK 177
Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK----LMLQY 161
+++ E + + S + + ++
Sbjct: 178 GLLNITDDSNIAPLEDNTTEEPTIITKPSTSIENSSINNKDYDRALEFYERGDYVNAIKS 237
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
+ +++ +G+ Y +Y A + Y
Sbjct: 238 FNALIKNEDKDV---------------AENSIFYMGKAYYYINKYDNASKVLLSAIKTYP 282
Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+++ +EA+ L +++ ++ ++A+ + P ++ ++
Sbjct: 283 KSKNVKEAILYLGKSFASIGDKNKAKAYYQKVMSIPPMDSLSQEANDSIQ 332
>gi|213622630|ref|ZP_03375413.1| hypothetical protein SentesTyp_36026 [Salmonella enterica subsp.
enterica serovar Typhi str. E98-2068]
Length = 116
Score = 43.6 bits (100), Expect = 0.028, Method: Composition-based stats.
Identities = 13/66 (19%), Positives = 23/66 (34%)
Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
+ AI FQ + Y D+ + A L + D+A + + + YP+
Sbjct: 7 QDKSRQDDAIVAFQNFIKKYPDSTYQPNANYWLGQLNYNKGKKDDAAYYFASVVKNYPKS 66
Query: 261 YWARYV 266
A
Sbjct: 67 PKAADA 72
Score = 42.9 bits (98), Expect = 0.054, Method: Composition-based stats.
Identities = 19/121 (15%), Positives = 41/121 (33%), Gaps = 14/121 (11%)
Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
D+ + +++Y +S Y A +++ K+ A
Sbjct: 7 QDKSRQDDAIVAFQNFIKKYPDSTYQPNANYWLGQLNYNKGKKD--------------DA 52
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
F V+ NY + A +AM ++ +A+ V + +YP A+ +
Sbjct: 53 AYYFASVVKNYPKSPKAADAMYKVGVIMQDKGDTAKAKAVYQQVINKYPGTDGAKQAQKR 112
Query: 270 V 270
+
Sbjct: 113 L 113
>gi|288817423|ref|YP_003431770.1| hypothetical protein HTH_0102 [Hydrogenobacter thermophilus TK-6]
gi|288786822|dbj|BAI68569.1| hypothetical protein HTH_0102 [Hydrogenobacter thermophilus TK-6]
gi|308751030|gb|ADO44513.1| TPR repeat-containing protein [Hydrogenobacter thermophilus TK-6]
Length = 846
Score = 43.6 bits (100), Expect = 0.028, Method: Composition-based stats.
Identities = 24/210 (11%), Positives = 65/210 (30%), Gaps = 11/210 (5%)
Query: 65 VLFLKEQNFSKAYEYFNQC------SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
++K +SKAY+ ++ + ++ +Y
Sbjct: 356 YSYVKLGEYSKAYDLLKNLSRKNREEYEWELETAYWADRSLEPILEEIRNRYPALYREYT 415
Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR--ATKLMLQYMSRIVERYTNSPYVK 176
+ Y A ++ + V + ++ ++
Sbjct: 416 GWFYFKKGDWENAVRYLEDPYYKALAYFNMKDYKGVLNILESRNSERDRVLKAKSALFLG 475
Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
+ + ++ + +G Y G+Y ++ F+ + S++ +A+ +L +A
Sbjct: 476 DPKLARSFLTDKTDEELYLLGLSYFLEGDYESSAKYFKSIS---SNSPLKPKALLKLGDA 532
Query: 237 YVALALMDEAREVVSLIQERYPQGYWARYV 266
++ A+ I +YP A+Y
Sbjct: 533 LYNEGKVESAKAYYYEIISKYPNSEQAKYA 562
Score = 36.7 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 13/196 (6%), Positives = 48/196 (24%), Gaps = 2/196 (1%)
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
Y + + + + A E + + +L +V+
Sbjct: 95 YRLGIDYYLQGKYGPAKEELFKVVAMPSPFKPMAEYVLGVIYVREGKEDKATELFKHSCS 154
Query: 121 ITQYPESKNVD--YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
+ + + + Y + +D + A + + + Y +
Sbjct: 155 FSHMYQKASCESYYALSFLLNGKVPQNQDPMWKAVADIKSGRITKPVCDGAIFKEYCQYV 214
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
+ + + + + + + + + A+ L
Sbjct: 215 HEFYEGKEGKNYKDSLRLRKAIVLYQRGSLLQAEETFKEYSKPSKPYRDVALYYLGLIEA 274
Query: 239 ALALMDEAREVVSLIQ 254
+A + S+++
Sbjct: 275 KRGNERKALDYASILE 290
>gi|146283136|ref|YP_001173289.1| hypothetical protein PST_2801 [Pseudomonas stutzeri A1501]
gi|145571341|gb|ABP80447.1| conserved hypothetical protein [Pseudomonas stutzeri A1501]
Length = 270
Score = 43.6 bits (100), Expect = 0.028, Method: Composition-based stats.
Identities = 24/209 (11%), Positives = 60/209 (28%), Gaps = 3/209 (1%)
Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
+ +LF++ Q + + + + + A+ +
Sbjct: 62 QGMLFMQLQQMQEEIAQLRGMLEEQQNQIQRLQQEGLERYQDLDRRLSSGPAASSNQSAP 121
Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
+ +Q P ++ I + + A F
Sbjct: 122 SREPAAAGGAGASAASSGQSQSASGDPAQEKLYYDA--AFDLIKAKDFDKASQAFAAFLR 179
Query: 183 TVGRNQLAAKEVEI-GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
+Q A G L +G+ A F V Y +++ +L + + +
Sbjct: 180 KYPDSQYAGNAQYWLGEVNLAKGDLQGAGQAFARVSQAYPQHSKVPDSLYKLADVEIRMG 239
Query: 242 LMDEAREVVSLIQERYPQGYWARYVETLV 270
D+A+ ++ + +YP A+ + +
Sbjct: 240 NRDKAQGILRQVIAQYPNTSAAQLAQRQL 268
Score = 35.5 bits (79), Expect = 8.1, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 30/80 (37%)
Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
D ++ Y+ A +K ++F KA + F R +P + A + V + G Q
Sbjct: 147 DPAQEKLYYDAAFDLIKAKDFDKASQAFAAFLRKYPDSQYAGNAQYWLGEVNLAKGDLQG 206
Query: 113 AASLGEEYITQYPESKNVDY 132
A YP+ V
Sbjct: 207 AGQAFARVSQAYPQHSKVPD 226
>gi|148265712|ref|YP_001232418.1| tetratricopeptide domain-containing protein [Geobacter
uraniireducens Rf4]
gi|146399212|gb|ABQ27845.1| Tetratricopeptide domain protein [Geobacter uraniireducens Rf4]
Length = 239
Score = 43.6 bits (100), Expect = 0.028, Method: Composition-based stats.
Identities = 25/251 (9%), Positives = 64/251 (25%), Gaps = 15/251 (5%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
+ + + VG ++A + + + ++A
Sbjct: 1 MRLLYGLIIGVFSFLAVGCGNNDLVVK---------------KQAEMEARLEQLAQANVA 45
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
N D + L + A K + + + +
Sbjct: 46 TNAHLTDLTNDIRTLQIQLSATSADVEALKPSYKEFKASIELIYQKLAPPPPAETAKIEV 105
Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
+ + + Y+ + A +G
Sbjct: 106 VNKEAAPSDNDSAPQDAYIKAFGLFSANNYSGAIEAFEAFVKSYPDSEYAGNAVYWVGEC 165
Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
Y + Y A+ F V+ +Y +AM ++ + +++ +AR + + +YP+
Sbjct: 166 YYTQHNYSKALESFSKVVVDYPKGNKVPDAMLKIGYSLISMNEPLKARAELQSLVGKYPK 225
Query: 260 GYWARYVETLV 270
A +
Sbjct: 226 SPAAAKARERL 236
>gi|119358468|ref|YP_913112.1| putative lipoprotein [Chlorobium phaeobacteroides DSM 266]
gi|119355817|gb|ABL66688.1| putative lipoprotein [Chlorobium phaeobacteroides DSM 266]
Length = 298
Score = 43.6 bits (100), Expect = 0.028, Method: Composition-based stats.
Identities = 27/207 (13%), Positives = 67/207 (32%), Gaps = 2/207 (0%)
Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
++ A + + + + E +++ + + + A + +
Sbjct: 73 LEDDVLFYLAQSYFNTKQYLLSAEMYSRLLQLNAGSPYTPTAQFQLAKSHEKLSSHYEFD 132
Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM--LQYMSRIVERYTNS 172
+ Q Y + A + + ++ + S
Sbjct: 133 HEHTKKAIQQYALYIEQYPGRDSAVVAADIQTYQELLKINPANANYQDQLAVLKLESERS 192
Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232
+ A+ + R++LA +V I Y++ G+ A+ + V+ Y D + E A
Sbjct: 193 GSLSYAKNAIKTFRDKLARNKVSIAHQYIQLGKPKGAVIFYDEVIRFYPDTIYLEAAWKG 252
Query: 233 LVEAYVALALMDEAREVVSLIQERYPQ 259
V+A + EA + + + YP+
Sbjct: 253 KVDALILRKKWMEAGQALDQYLQLYPE 279
Score = 39.8 bits (90), Expect = 0.43, Method: Composition-based stats.
Identities = 26/213 (12%), Positives = 60/213 (28%), Gaps = 4/213 (1%)
Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
E Y A+ ++++ A + + L A ++ +Y +A +
Sbjct: 40 ERYAAALADYNKKDYDDAALTLEALMFSVRGSALEDDVLFYLAQSYFNTKQYLLSAEMYS 99
Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP---YV 175
+ S + + S+ ++ +D TK +Q + +E+Y
Sbjct: 100 RLLQLNAGSPYTPTAQFQLAKSHEKLSSHYEFDHEHTKKAIQQYALYIEQYPGRDSAVVA 159
Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
+ Y + + A + LK + + + A +
Sbjct: 160 ADIQTYQELLKINPANANYQDQLAVLKLESERSGSLSYAKNAIKTFRDKLARN-KVSIAH 218
Query: 236 AYVALALMDEAREVVSLIQERYPQGYWARYVET 268
Y+ L A + YP +
Sbjct: 219 QYIQLGKPKGAVIFYDEVIRFYPDTIYLEAAWK 251
>gi|261414710|ref|YP_003248393.1| Tetratricopeptide repeat protein [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261371166|gb|ACX73911.1| Tetratricopeptide repeat protein [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|302326849|gb|ADL26050.1| tetratricopeptide repeat protein [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 445
Score = 43.6 bits (100), Expect = 0.028, Method: Composition-based stats.
Identities = 24/213 (11%), Positives = 56/213 (26%), Gaps = 4/213 (1%)
Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
+ + + + KA + A L + ++ +
Sbjct: 220 AYFYAGLTRYEMGEYDKAEFNLKKGLSYKERGNDANYYLAKINQKSKRTEQEKKYLAAYL 279
Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
+ + + V + A + Q A L+ ++ N
Sbjct: 280 KKAAPDAKFRKVAEDRMAEINAVASAAAEEKAMQEAEAKALKDA----KKSGNDKSKSVD 335
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
A+ + G + AA+ ++ +L N + AM ++ Y
Sbjct: 336 VAPQREDVAPTASNSIANANALYADGYHEAALQMYKALLENEITPDERYFAMLQMGNIYR 395
Query: 239 ALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+ A + +P WA E ++
Sbjct: 396 EMRDFHSAVTRYRDVVREFPDSDWATEAERALE 428
>gi|302342735|ref|YP_003807264.1| cell wall hydrolase/autolysin [Desulfarculus baarsii DSM 2075]
gi|301639348|gb|ADK84670.1| cell wall hydrolase/autolysin [Desulfarculus baarsii DSM 2075]
Length = 584
Score = 43.6 bits (100), Expect = 0.029, Method: Composition-based stats.
Identities = 12/121 (9%), Positives = 34/121 (28%), Gaps = 3/121 (2%)
Query: 153 RATKLMLQYMSRI--VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY-VAA 209
+ + Y + G + K+ + A
Sbjct: 48 MKHDDAKGVYHNWVSLAERFSRIYTADPSGPLAPGCLLWTGRIFAGAYEQFKQKKDLDKA 107
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
+ ++ ++ D+ A++A + E ++ + A + + YP A +
Sbjct: 108 SDALRRLINHFPDSNLADDAQLMIAELHIKHGDVKTAYLELLRVVVNYPNSDMAPEAKKR 167
Query: 270 V 270
+
Sbjct: 168 L 168
>gi|85859751|ref|YP_461953.1| TPR repeat-containing protein [Syntrophus aciditrophicus SB]
gi|85722842|gb|ABC77785.1| tetratricopeptide repeat family protein [Syntrophus aciditrophicus
SB]
Length = 277
Score = 43.6 bits (100), Expect = 0.029, Method: Composition-based stats.
Identities = 20/262 (7%), Positives = 58/262 (22%), Gaps = 18/262 (6%)
Query: 19 LYKFALTIFF---SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
+ + I + + G + +++ ++
Sbjct: 19 MSRKLSIITLWAWIGLIISVAGCATS---------PWNQEQADIHMNIGNAYIQSGKYNS 69
Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
A + Q + SL +S + + A +
Sbjct: 70 ALKELLQAKKLGKPNPRVHYSLAVSYYYGKGLNQLAIAELKKAVNLDTDYSEAYNFLGVI 129
Query: 136 LVGMSYAQMIRDVPYDQRATKL----MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
M + + L + + Y Y + Y
Sbjct: 130 YSSMEKWDQAIEAFEKALSNILYDTPAYAHYNMGWAYYKKGDYGSALKQYELALVQDPDT 189
Query: 192 KEVEIGRYYLKR--GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
++ + + + + + + E+ L Y+ +++A
Sbjct: 190 VDLPLLEKNMGIVLLAQGRTADALKHLQKSIALMPSLAESHYWLGRCYIEQKNLEKAEAA 249
Query: 250 VSLIQERYPQGYWARYVETLVK 271
+ + P WA ++
Sbjct: 250 FQQVMKLAPDTEWAEKSRGKIE 271
>gi|327481489|gb|AEA84799.1| conserved hypothetical protein [Pseudomonas stutzeri DSM 4166]
Length = 270
Score = 43.6 bits (100), Expect = 0.029, Method: Composition-based stats.
Identities = 24/209 (11%), Positives = 60/209 (28%), Gaps = 3/209 (1%)
Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
+ +LF++ Q + + + + + A+ +
Sbjct: 62 QGMLFMQLQQMQEEIAQLRGMLEEQQNQIQRLQQEGLERYQDLDRRLSSGPAASSNQSAP 121
Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
+ +Q P ++ I + + A F
Sbjct: 122 SREPAAAGGAGASTASSGQSQSASGDPAQEKLYYDA--AFDLIKAKDFDKASQAFAAFLR 179
Query: 183 TVGRNQLAAKEVEI-GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
+Q A G L +G+ A F V Y +++ +L + + +
Sbjct: 180 KYPESQYAGNAQYWLGEVNLAKGDLQGAGQAFARVSQAYPQHSKVPDSLYKLADVEIRMG 239
Query: 242 LMDEAREVVSLIQERYPQGYWARYVETLV 270
D+A+ ++ + +YP A+ + +
Sbjct: 240 NRDKAQGILRQVIAQYPNTSAAQLAQRQL 268
>gi|302345210|ref|YP_003813563.1| tetratricopeptide repeat protein [Prevotella melaninogenica ATCC
25845]
gi|302149062|gb|ADK95324.1| tetratricopeptide repeat protein [Prevotella melaninogenica ATCC
25845]
Length = 1172
Score = 43.6 bits (100), Expect = 0.029, Method: Composition-based stats.
Identities = 30/275 (10%), Positives = 72/275 (26%), Gaps = 36/275 (13%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLK---------- 69
+ + +I+V ++ +++ Y A ++
Sbjct: 6 LRHIILSLLAISVLTIISCSTKNNTSQTRWWHAFNTRYNVYYNGAQAYIDGSLEKEKGNK 65
Query: 70 ---------------------EQNFSKAYEYFNQCSRDFPFAGVARKSL-LMSAFVQYSA 107
+ NF +A E + +
Sbjct: 66 DNFTELIPLYTVGNKNSRDLGKGNFDRAIEKAEKAIAKHSIKKRPEWTKSRRKTEKDIEW 125
Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
++ + S+ + ++A M R ++++
Sbjct: 126 LSRREYNPFLWKAWMLMGRSQFHKGAFEEAAATFAYMSRIYKGQPAIYGKARAWLAKCYI 185
Query: 168 RYTNSPYVKGARFYVTVGR-NQLAAKEVEIGR--YYLKRGEYVAAIPRFQLVLANYSDAE 224
+ + + A KE + YYL GE+ A+P Q V+ + +
Sbjct: 186 EQDWLYDAEDIIRNMQRDSLDWQAVKEWDYTYADYYLHSGEFEKAVPYLQKVIKHEMRKK 245
Query: 225 HAEEAMARLVEAYVALALMDEAREVV-SLIQERYP 258
+ L + +L +EA + +I+ P
Sbjct: 246 QKARELYLLGQVLASLGRNEEAYKAFQRVIRTNPP 280
Score = 41.3 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 12/71 (16%), Positives = 24/71 (33%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ + A + V NY D E ++ L Y+ A V+
Sbjct: 597 HHSGVIFKDRLDNLRLAEKALRRVSDNYPDYEQMDDVYYHLYLLYMRKNEPQVAENYVTR 656
Query: 253 IQERYPQGYWA 263
+ +++P+ W
Sbjct: 657 LSQKFPKSKWT 667
>gi|260429456|ref|ZP_05783433.1| tetratricopeptide TPR_2 repeat protein [Citreicella sp. SE45]
gi|260420079|gb|EEX13332.1| tetratricopeptide TPR_2 repeat protein [Citreicella sp. SE45]
Length = 281
Score = 43.6 bits (100), Expect = 0.029, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 28/59 (47%)
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
G A RF ANY +++ A EA+ RL + AL + EA +S + RYP
Sbjct: 207 DVGNTREAARRFLDTYANYPESDAAPEALWRLGASLGALGSVSEACVTLSEVSARYPGS 265
>gi|196228135|ref|ZP_03127002.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
Ellin428]
gi|196227538|gb|EDY22041.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
Ellin428]
Length = 844
Score = 43.6 bits (100), Expect = 0.030, Method: Composition-based stats.
Identities = 14/66 (21%), Positives = 29/66 (43%)
Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
Y ++ +Y A P ++ L Y +A A+ RL E Y + ++ A+ + +
Sbjct: 93 ADNYYEKKQYEMAAPEYEKYLGLYKNAPDTATALFRLGECYRHIGNVNSAKNAYETLLAQ 152
Query: 257 YPQGYW 262
+ G +
Sbjct: 153 FASGEF 158
Score = 35.5 bits (79), Expect = 8.1, Method: Composition-based stats.
Identities = 27/211 (12%), Positives = 61/211 (28%), Gaps = 23/211 (10%)
Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS-RDFPFAGVARKSLLMS 100
+ + + KA + K++++ A ++ ++L
Sbjct: 404 EIDKYLAANPDADKRDEALLMKAEILFKKEDWEGAMAIYSTLELSHQLTGNRKAEALFRL 463
Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
+ Q A + A + T YP K V Y G++ + L+
Sbjct: 464 GWCQLQAKNTEAAIKTFTSFATAYPTHKLVPYALLQRGLAEQSLKNLTG--------ALK 515
Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220
+I++ + +P + A + Q A F+ +L +
Sbjct: 516 DYEQIIKSFPKAPQRELALQQKALIEGQQGNNS--------------AMALSFKQLLKEF 561
Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVS 251
+ +A + A + EA +
Sbjct: 562 PETAARAQANYWIGWAAFEVKNYKEAIPALE 592
>gi|304384083|ref|ZP_07366537.1| conserved hypothetical protein [Prevotella marshii DSM 16973]
gi|304334799|gb|EFM01075.1| conserved hypothetical protein [Prevotella marshii DSM 16973]
Length = 1088
Score = 43.6 bits (100), Expect = 0.030, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 20/71 (28%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ K A ++ ++ +E L Y L A V
Sbjct: 593 FHAGVIFKDKIDLPALAEKYLLRLIHDFPKYRLIDETYYHLYLLYARLGKTSVAESYVDR 652
Query: 253 IQERYPQGYWA 263
+++ YP W
Sbjct: 653 LRKEYPDSKWT 663
>gi|73544347|ref|XP_848068.1| intraflagellar transport protein IFT88 [Leishmania major strain
Friedlin]
gi|321438422|emb|CBZ12177.1| putative intraflagellar transport protein IFT88 [Leishmania major
strain Friedlin]
Length = 811
Score = 43.6 bits (100), Expect = 0.030, Method: Composition-based stats.
Identities = 29/213 (13%), Positives = 60/213 (28%), Gaps = 6/213 (2%)
Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
++ + +Y + K + +A F + + V + +
Sbjct: 495 KAKELYNKALAVEADNVEAIYNLGLAAKKLGLYEEAVRMFKRVQALVDSSEVLYQIADL- 553
Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
+ + + L T + +Y + + M
Sbjct: 554 SDLVGDPAALEWFNRLIGRVPTDPNALARIGSLYARDSDDVQAFHYYLEAYRYYQVNMDV 613
Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE--IGRYYLKRGEYVAAIPRFQLVLA 218
N Y K +F+ Q + + + + +RG+YV A ++ V
Sbjct: 614 ISWLGAYFVKNEVYDKAVQFFERASHIQPQEVKWQLMVASCHRRRGDYVQAKRLYEQVHR 673
Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
Y D E + LV+ L +EA E
Sbjct: 674 RYPDNI---ECLNYLVQLCKDAGLNEEANEWFK 703
Score = 36.3 bits (81), Expect = 4.3, Method: Composition-based stats.
Identities = 27/221 (12%), Positives = 64/221 (28%), Gaps = 4/221 (1%)
Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
+ L V + + + K ++++ KA E +N+ A +L ++
Sbjct: 461 NGEQYSDLSLVANQYNAKALVNKGNFSFVKKDYDKAKELYNKALAVEADNVEAIYNLGLA 520
Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK-LML 159
A + + + + + + LVG A + + T L
Sbjct: 521 AKKLGLYEEAVRMFKRVQALVDSSEVLYQIADLSDLVGDPAALEWFNRLIGRVPTDPNAL 580
Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219
+ + R ++ +G Y++K Y A+ F+
Sbjct: 581 ARIGSLYARDSDDVQAFHYYLEAYRYYQVNMDVISWLGAYFVKNEVYDKAVQFFERASHI 640
Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
+ + + +A+ + + RYP
Sbjct: 641 QPQEVKWQ---LMVASCHRRRGDYVQAKRLYEQVHRRYPDN 678
>gi|330974765|gb|EGH74831.1| competence lipoprotein ComL, putative [Pseudomonas syringae pv.
aceris str. M302273PT]
Length = 174
Score = 43.6 bits (100), Expect = 0.030, Method: Composition-based stats.
Identities = 46/172 (26%), Positives = 76/172 (44%), Gaps = 10/172 (5%)
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+PF A ++ L + Y G+ + A S E +I +P+ NVDY YY+ G
Sbjct: 1 KLKALESRYPFGRYADQAQLELIYSNYKNGEPEAAKSAAERFIRLHPQHPNVDYAYYMKG 60
Query: 139 MSYAQMI----------RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
++ D A + +++ R+ NS Y A+ + RN
Sbjct: 61 LTSFDQDVGLLARFLPLDQTKRDPGAARDSFNEFAQLTSRFPNSRYAPDAKQRMIYLRNL 120
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
LA+ E+ + YYL R YVAA R + V+ N+ + + +A +VE+Y L
Sbjct: 121 LASYEIHVADYYLTRQAYVAAANRGRYVVENFQETPSVGDGLAVMVESYQRL 172
>gi|301626228|ref|XP_002942298.1| PREDICTED: transmembrane and TPR repeat-containing protein 1-like
[Xenopus (Silurana) tropicalis]
Length = 1127
Score = 43.6 bits (100), Expect = 0.030, Method: Composition-based stats.
Identities = 23/200 (11%), Positives = 51/200 (25%), Gaps = 3/200 (1%)
Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
T + Y A + +A ++ R +P A +L A +Y
Sbjct: 761 TLPHNAKVHYNYANFLKDQSRKDEAIMHYKTVLRLYPKHSSALNNLGTLTANTTEAEEYY 820
Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
+ A + ++ + ++R+ + + ++
Sbjct: 821 RRALMISPQHSRALFNLGNLLRNKGQDDEAELLLRESLHYGSYFGDAYSSLGSLLADQKR 880
Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231
+ + G + + + A + L D AM
Sbjct: 881 YEEADDVYQTGIKSCPENSDLHNNYGVFLVDMEKSQKAESHYLHALHLRPDHHV---AML 937
Query: 232 RLVEAYVALALMDEAREVVS 251
L Y +L EA +
Sbjct: 938 NLGRLYRSLGQNKEAEKWYR 957
>gi|152996218|ref|YP_001341053.1| Tol-Pal system YbgF [Marinomonas sp. MWYL1]
gi|150837142|gb|ABR71118.1| Tol-Pal system YbgF [Marinomonas sp. MWYL1]
Length = 262
Score = 43.6 bits (100), Expect = 0.031, Method: Composition-based stats.
Identities = 18/120 (15%), Positives = 40/120 (33%), Gaps = 5/120 (4%)
Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL-----KRGEY 206
Q T Q + + + + ++ G Y+L +G+
Sbjct: 135 QPPTAQAQQAYNDAYNLIRQRNFDEAETAFSKFVKDYPDNSLTGNGYYWLGEVKLVQGKS 194
Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
AI F V+ N+ ++++ +L L +A+ + + R+P A+
Sbjct: 195 KEAIEAFSTVIQNFPGHSKEQDSLYKLGTVSDQLGDTAKAKSYLQDVIRRFPNSKAAKLA 254
>gi|254787333|ref|YP_003074762.1| tetratricopeptide protein [Teredinibacter turnerae T7901]
gi|237684155|gb|ACR11419.1| tetratricopeptide protein [Teredinibacter turnerae T7901]
Length = 254
Score = 43.6 bits (100), Expect = 0.031, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 30/75 (40%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
LK+ Y AA+ + + L NY +A A+ L E Y+ ++ +R+ S
Sbjct: 136 YRAAIDLVLKQQNYDAAVVKLKEHLQNYPKGRYAGNALYWLGEIYLLKGELETSRQWFSQ 195
Query: 253 IQERYPQGYWARYVE 267
+ +P +
Sbjct: 196 LLSEFPDHPKVADAQ 210
>gi|124006636|ref|ZP_01691468.1| tetratricopeptide repeat family [Microscilla marina ATCC 23134]
gi|123987791|gb|EAY27482.1| tetratricopeptide repeat family [Microscilla marina ATCC 23134]
Length = 1020
Score = 43.6 bits (100), Expect = 0.031, Method: Composition-based stats.
Identities = 26/218 (11%), Positives = 62/218 (28%), Gaps = 16/218 (7%)
Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
+ YQ+ + + V + + +S+A FN+ +D ++ + A +
Sbjct: 440 NDEIKSAYQQIAFARGVEYFNAEAYSQAIAMFNKSLQDIRLPQLSYVTRYWLAECYAISQ 499
Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
K +++ + + + + Y+ R L Y + V
Sbjct: 500 KPKESIPYYLQVRKAFDNQNKYAL-------KASYGLGYAYYNLREYDKALPYFQQCVTS 552
Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
+ + + +LA +Y Y I +
Sbjct: 553 WQLRTAAEEETTPYSDAVTRLADCFYVQKKYANALHLYDELIAG---------KHPEQDY 603
Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
A + VA D A++ + + +P +
Sbjct: 604 AYYQQGVIKVAQGDYDLAKQKFEDVVQNFPNSRYYDQA 641
Score = 37.5 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 31/201 (15%), Positives = 56/201 (27%), Gaps = 17/201 (8%)
Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
+ Y + + + KA YF QC + A + +
Sbjct: 524 KASYGLGYAYYNLREYDKALPYFQQCVTSWQLRTAAEEETTPYSDAVTRLADCFYVQKKY 583
Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
+ Y E + + Q L Q +V+ + NS Y
Sbjct: 584 ANALHLYDELIAGKHPEQDYAY---YQQGVIKVAQGDYDLAKQKFEDVVQNFPNSRYYDQ 640
Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
A + E L+ G Y AI F ++ + A+ + +Y
Sbjct: 641 ALY--------------EKALIDLENGHYSVAIAGFSTLMKERPHSLLRPNALLKRALSY 686
Query: 238 VALALMDEAREVVSLIQERYP 258
+EA + I + +P
Sbjct: 687 QNFDNTNEAIKDYKAILKDHP 707
Score = 35.9 bits (80), Expect = 6.4, Method: Composition-based stats.
Identities = 27/213 (12%), Positives = 61/213 (28%), Gaps = 16/213 (7%)
Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
Y++ V+ + + ++ A + F ++FP + ++L A + G Y
Sbjct: 597 KHPEQDYAYYQQGVIKVAQGDYDLAKQKFEDVVQNFPNSRYYDQALYEKALIDLENGHYS 656
Query: 112 QAASLGEEYITQYPESKNVDYV------------YYLVGMSYAQMIRDVPYDQRATKLML 159
A + + + P S + + I L
Sbjct: 657 VAIAGFSTLMKERPHSLLRPNALLKRALSYQNFDNTNEAIKDYKAILKDHPTHSTAPSAL 716
Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLA---AKEVEIGRYYLKRGEYVAAIPRFQLV 216
+ ++ + + + ++ G+Y AI F+
Sbjct: 717 LSLQDLLTQAGRTDELNEILRNYKKVNPNSKALLTIDLRNAEQAFFDGKYSEAIILFKAY 776
Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
++ Y + A L EAY+ + A
Sbjct: 777 ISKYPEGGS-PNAKYYLGEAYLNSGDNENALRY 808
>gi|94268878|ref|ZP_01291311.1| TPR repeat [delta proteobacterium MLMS-1]
gi|93451429|gb|EAT02275.1| TPR repeat [delta proteobacterium MLMS-1]
Length = 374
Score = 43.6 bits (100), Expect = 0.031, Method: Composition-based stats.
Identities = 18/85 (21%), Positives = 33/85 (38%)
Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
+Q A +G +GEY AI +Q V+A + + + A+ R A+ L A
Sbjct: 288 DQAADTRFLLGESLYGQGEYELAILEYQRVIAEFPNHDRIPRALLRQGMAFEELREPSTA 347
Query: 247 REVVSLIQERYPQGYWARYVETLVK 271
+ + +P A ++
Sbjct: 348 TIIYERLAGDHPDSEEAAQARQRLQ 372
>gi|319952043|ref|YP_004163310.1| ragb/susd domain-containing protein [Cellulophaga algicola DSM
14237]
gi|319420703|gb|ADV47812.1| RagB/SusD domain-containing protein [Cellulophaga algicola DSM
14237]
Length = 492
Score = 43.6 bits (100), Expect = 0.032, Method: Composition-based stats.
Identities = 28/264 (10%), Positives = 58/264 (21%), Gaps = 28/264 (10%)
Query: 18 QLYKFALT---IFFSIAVCFLVGWERQSSR-DVYLDSVTDVRYQREVYEKAVLFLKEQNF 73
+ K I F+ F + + ++ D E Y+ A+ +
Sbjct: 1 MMIKNTFLKHVIAFASITIFSISCSDDFVNVESEDENSEDFFNSEEDYQSALT----GAY 56
Query: 74 SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
+ + + V + +
Sbjct: 57 DLLQSTYLNVMLGEIASDNTLAGGESATDVIGIQQIDDMLHTSLNVQLESIWGWMFAGVN 116
Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
+ + K L + + Y VK +L +
Sbjct: 117 RANYVLEFKDKTDFTG------KEALLAEATFLRAYYYFELVKWFGDVPLAVDQRLLFGD 170
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE------EAMARLVEAYVALALMDEAR 247
+ Y Q + N + + A A L +AY+ EA
Sbjct: 171 QYLVGRTPVAEIYAQIEIDLQYAVDNLPYTQAQKGRITKGAAQALLGKAYLYQDKFTEAA 230
Query: 248 EVVSLIQERYPQGYWARYVETLVK 271
V+ + P L++
Sbjct: 231 NVLEDLINNGP--------YDLLE 246
>gi|254496227|ref|ZP_05109121.1| outer membrane protein [Legionella drancourtii LLAP12]
gi|254354532|gb|EET13173.1| outer membrane protein [Legionella drancourtii LLAP12]
Length = 319
Score = 43.6 bits (100), Expect = 0.032, Method: Composition-based stats.
Identities = 20/105 (19%), Positives = 44/105 (41%)
Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
RY ++ A + +G YL + +Y A+ F +VL ++ + +
Sbjct: 213 RRYDDALNSMNLFVQKYPRGGYTANAQYWLGELYLVKKDYAKAVEHFNVVLQQFATSSKS 272
Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+M ++ AY A+ EA++ + + YP A+ + ++
Sbjct: 273 AASMLKVGYAYDAMGNKPEAKKYLQQVVRAYPGTPTAQLANSKLQ 317
>gi|322819414|gb|EFZ26542.1| intraflagellar transport protein IFT88, putative [Trypanosoma
cruzi]
Length = 784
Score = 43.6 bits (100), Expect = 0.032, Method: Composition-based stats.
Identities = 29/226 (12%), Positives = 68/226 (30%), Gaps = 6/226 (2%)
Query: 32 VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91
F+ G ++ + +Y + + + +A + F + + +
Sbjct: 488 FLFMKGSYEKAKVYYNDALAVEADNIEAIYNLGLTAKRLGLYEEALKMFKRV-QSLVDSH 546
Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151
+ + + + L T + +Y G +
Sbjct: 547 EVMYQIADINDLVGNPNALEWFNRLIGRVPTDPNILARMGSLYAREGDDSQAFHYYLEAY 606
Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE--IGRYYLKRGEYVAA 209
+ M N Y K +F+ + Q + + + + +RG+Y+ A
Sbjct: 607 RYYQVNMDVISWLGAYFVKNEIYDKAIQFFERASQIQPLEVKWQLMVASCHRRRGDYIQA 666
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
++ V Y + E + LV L++EA E I++
Sbjct: 667 KRLYEAVHRKYPE---NMECLRYLVHLCKDAGLIEEANEWFKKIKK 709
>gi|254482551|ref|ZP_05095790.1| tol-pal system protein YbgF, putative [marine gamma proteobacterium
HTCC2148]
gi|214037242|gb|EEB77910.1| tol-pal system protein YbgF, putative [marine gamma proteobacterium
HTCC2148]
Length = 325
Score = 43.6 bits (100), Expect = 0.032, Method: Composition-based stats.
Identities = 15/115 (13%), Positives = 38/115 (33%), Gaps = 12/115 (10%)
Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
+ + + + + Y + Y A +++ +
Sbjct: 204 YRGAYSLVRSQQFEQAVGAFQQFLRNYPDGKYAPNAHYWLGELYL------------VID 251
Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
+ A+ F L+L Y D A +AM +L + ++++E + + +Y
Sbjct: 252 PSDLEASRQAFTLLLNQYPDNPKAPDAMYKLGKVQFLKGNREKSKEYLDRVISKY 306
Score = 42.5 bits (97), Expect = 0.060, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 3/76 (3%)
Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE--AREVVSLIQ 254
++ ++ A+ FQ L NY D ++A A L E Y+ + D +R+ +L+
Sbjct: 207 AYSLVRSQQFEQAVGAFQQFLRNYPDGKYAPNAHYWLGELYLVIDPSDLEASRQAFTLLL 266
Query: 255 ERYPQGYWARYV-ETL 269
+YP A L
Sbjct: 267 NQYPDNPKAPDAMYKL 282
>gi|16930360|gb|AAL31868.1| 34kDa outer membrane protein [Coxiella burnetii]
Length = 300
Score = 43.6 bits (100), Expect = 0.032, Method: Composition-based stats.
Identities = 12/60 (20%), Positives = 24/60 (40%)
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
+ +Y A FQ L +Y + + A L E Y+ A +++++P+
Sbjct: 182 TKKQYDKAQASFQNYLNDYPNGSYVANAHYWLGEIYLQQKDRKNAAHEFQTVRDKFPKSE 241
Score = 42.9 bits (98), Expect = 0.048, Method: Composition-based stats.
Identities = 20/190 (10%), Positives = 56/190 (29%), Gaps = 14/190 (7%)
Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
+ + + ++ ++ + + + + S
Sbjct: 113 ELLNNQQRSFYRDLDQRITQLKNLNSNNSDSSNDNSASSSQKPSSGDTSNTNNIQLQDSN 172
Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
++ + Y N Y +A +G YL
Sbjct: 173 TYRQALDLLTKKQYDKAQASFQNYLNDYPNGSY--------------VANAHYWLGEIYL 218
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
++ + A FQ V + +E +A +L + +A+E ++ I++++P+
Sbjct: 219 QQKDRKNAAHEFQTVRDKFPKSEKVLDAKLKLAIIDAEDGKIKQAKEELTEIKKQHPEST 278
Query: 262 WARYVETLVK 271
A+ ++
Sbjct: 279 AAQLANIRLQ 288
>gi|332534219|ref|ZP_08410064.1| TPR repeat containing exported protein [Pseudoalteromonas
haloplanktis ANT/505]
gi|332036299|gb|EGI72770.1| TPR repeat containing exported protein [Pseudoalteromonas
haloplanktis ANT/505]
Length = 231
Score = 43.6 bits (100), Expect = 0.032, Method: Composition-based stats.
Identities = 18/121 (14%), Positives = 45/121 (37%), Gaps = 14/121 (11%)
Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
+ + + Y NS Y A +++ G+ + + V A
Sbjct: 123 MKDKRYDQAIPEFQTFLTTYPNSVYASNAHYWL--------------GQLLTIKNDGVKA 168
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
+ F++V+ + ++ +AM +L +A++++S + +YP A+
Sbjct: 169 VEHFKVVVNEFPNSNKRPDAMLKLGTLLQDQGSAAQAQKILSDLINQYPSTTAAKLATDR 228
Query: 270 V 270
+
Sbjct: 229 L 229
>gi|312882599|ref|ZP_07742339.1| tol-pal system protein YbgF [Vibrio caribbenthicus ATCC BAA-2122]
gi|309369759|gb|EFP97271.1| tol-pal system protein YbgF [Vibrio caribbenthicus ATCC BAA-2122]
Length = 253
Score = 43.6 bits (100), Expect = 0.032, Method: Composition-based stats.
Identities = 9/89 (10%), Positives = 25/89 (28%)
Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
F + + + + Y D+ +A+ +L + +
Sbjct: 163 FQKNYPDSNFTPNSHYWLGQLYFAKKQDKEAVKSFAAVVAYKDSVKRADALVKLGDIAMR 222
Query: 240 LALMDEAREVVSLIQERYPQGYWARYVET 268
++A++ + YP A +
Sbjct: 223 NNNEEQAKKYYQQVVSEYPNSSSAELAKK 251
Score = 36.3 bits (81), Expect = 4.1, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 29/79 (36%), Gaps = 3/79 (3%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
L++ +Y AI FQ NY D+ + L + Y A EA + +
Sbjct: 140 YQNAVDLILEKRDYTGAIAAFQAFQKNYPDSNFTPNSHYWLGQLYFAKKQDKEAVKSFAA 199
Query: 253 IQERYPQGYWARYVETLVK 271
+ Y + + LVK
Sbjct: 200 VVA-YKDSV--KRADALVK 215
>gi|332829805|gb|EGK02447.1| hypothetical protein HMPREF9455_01404 [Dysgonomonas gadei ATCC
BAA-286]
Length = 670
Score = 43.6 bits (100), Expect = 0.033, Method: Composition-based stats.
Identities = 27/225 (12%), Positives = 62/225 (27%), Gaps = 7/225 (3%)
Query: 35 LVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR 94
+V + +Q + ++ +Y++A+ + NF +F +
Sbjct: 435 IVEFSKQFNNQQLINKALKESGANYLYKEAIEQFDKGNFDDFLNHFFKAIHARYDIEKPL 494
Query: 95 KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
+ + + + L + Q K + YY +G +D
Sbjct: 495 QQRYIRKKLSIINKLKTKNRELQDRIYNQAETLKKLAQEYYQMGNECIVAYKDYRAGLAN 554
Query: 155 TKLML---QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
L R + Y + + N+ + RG+ +
Sbjct: 555 FNKALDLDPTYLDAWIRKGVTYYDQEDYYESMKCFNRAVELSPSSFKALYNRGKNRLKVD 614
Query: 212 RFQLVLANY----SDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+L L + L EAY A+ + + + +
Sbjct: 615 EPELALTDLIKACQQKPRHASCHDYLAEAYAAIGNFELSDKHYQI 659
>gi|164685794|ref|ZP_01945909.2| tol-pal system protein YbgF [Coxiella burnetii 'MSU Goat Q177']
gi|165918370|ref|ZP_02218456.1| tol-pal system protein YbgF [Coxiella burnetii RSA 334]
gi|164601308|gb|EAX33415.2| tol-pal system protein YbgF [Coxiella burnetii 'MSU Goat Q177']
gi|165917876|gb|EDR36480.1| tol-pal system protein YbgF [Coxiella burnetii RSA 334]
Length = 300
Score = 43.2 bits (99), Expect = 0.033, Method: Composition-based stats.
Identities = 12/60 (20%), Positives = 24/60 (40%)
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
+ +Y A FQ L +Y + + A L E Y+ A +++++P+
Sbjct: 182 TKKQYDKAQASFQNYLNDYPNGSYVANAHYWLGEIYLQQKDRKNAAHEFQTVRDKFPKSE 241
Score = 42.9 bits (98), Expect = 0.050, Method: Composition-based stats.
Identities = 20/190 (10%), Positives = 56/190 (29%), Gaps = 14/190 (7%)
Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
+ + + ++ ++ + + + + S
Sbjct: 113 ELLNNQQRSFYRDLDQRITQLKNLNSNNSDSSNDNSASSSQKPSSGDTSNTNNIQLQDSN 172
Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
++ + Y N Y +A +G YL
Sbjct: 173 TYRQALDLLTKKQYDKAQASFQNYLNDYPNGSY--------------VANAHYWLGEIYL 218
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
++ + A FQ V + +E +A +L + +A+E ++ I++++P+
Sbjct: 219 QQKDRKNAAHEFQTVRDKFPKSEKVLDAKLKLAIIDAEDGKIKQAKEELTEIKKQHPEST 278
Query: 262 WARYVETLVK 271
A+ ++
Sbjct: 279 AAQLANIRLQ 288
>gi|124516514|gb|EAY58022.1| protein of unknown function [Leptospirillum rubarum]
gi|206603409|gb|EDZ39889.1| Protein of unknown function [Leptospirillum sp. Group II '5-way
CG']
Length = 231
Score = 43.2 bits (99), Expect = 0.033, Method: Composition-based stats.
Identities = 27/211 (12%), Positives = 62/211 (29%), Gaps = 23/211 (10%)
Query: 50 SVTDVRYQREVYEKA-VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
S + YE + L + KA ++ + + + ++ + A G
Sbjct: 17 SPSSPLAGEAFYELGRMDDLYGNDPQKAAGHYMKSLENLKDGSLRQRVSIDLATDLEHLG 76
Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
K +A ++ S V+ + + + + L Y ++ +R
Sbjct: 77 KPDEALAILRGLDGSNLLSTFKPRVWD--------LTARILEHEGHYREALGYYKKVSDR 128
Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
+ + + +IG + +A + Y D+
Sbjct: 129 EPD--------------SFRGQKAQFKIGLLESLASDLPSAQRDLGRFVKRYPDSPFTPV 174
Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQ 259
A L + L +A ++ I+ YP
Sbjct: 175 ARFNLALTWDRLGDHQKALSILESIKGSYPN 205
>gi|148658379|ref|YP_001278584.1| hypothetical protein RoseRS_4293 [Roseiflexus sp. RS-1]
gi|148570489|gb|ABQ92634.1| Tetratricopeptide TPR_2 repeat protein [Roseiflexus sp. RS-1]
Length = 493
Score = 43.2 bits (99), Expect = 0.033, Method: Composition-based stats.
Identities = 24/217 (11%), Positives = 42/217 (19%), Gaps = 5/217 (2%)
Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL----MSAFVQYSAGKYQ 111
E Y A L +++ A P L + + + +
Sbjct: 270 QPAEAY-IAYAHLLNGDYAVAMTRLRDLVATAPDDPRPHIVLALAYLAAQDASAAFAEIR 328
Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
+A L + + A + + T+
Sbjct: 329 EARRLAPDDPDVLLALGEWHAAQRDYVAAAAAYAEALRLAPPERRGAYALTQAQYHLKTS 388
Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231
+ L R A + EA
Sbjct: 389 LQVCEHGLPAAAEAVAWLPGNAQAWSALAQARLVCGDATGSRDAAAQASRLDPASPEAAY 448
Query: 232 RLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
A AL AR+ + + P W E
Sbjct: 449 HYGRALAALGDRTAARDALIRAADLAPASEWRVRAEA 485
>gi|209517618|ref|ZP_03266456.1| tol-pal system protein YbgF [Burkholderia sp. H160]
gi|209501914|gb|EEA01932.1| tol-pal system protein YbgF [Burkholderia sp. H160]
Length = 252
Score = 43.2 bits (99), Expect = 0.033, Method: Composition-based stats.
Identities = 20/123 (16%), Positives = 42/123 (34%), Gaps = 14/123 (11%)
Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
+ K + +Y NSPY A++++ G +Y
Sbjct: 140 QQFRSGDFKNAAASFRSFISKYPNSPYQPTAQYWL--------------GNALYALRDYK 185
Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
+ +Q V+A Y A EA+ + + A++ + I +Y A+ +
Sbjct: 186 GSTAVWQGVVAKYPQHPRAPEALLAIANNQLEQGQKAAAKKTLEQIVAQYGGSDVAQSAQ 245
Query: 268 TLV 270
+ +
Sbjct: 246 SKL 248
Score = 40.9 bits (93), Expect = 0.20, Method: Composition-based stats.
Identities = 25/175 (14%), Positives = 48/175 (27%)
Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151
+ A + + ++ L T +S +D + V Q
Sbjct: 33 MFDDDQARQAILDLRSKTDSLSSQLSAAQRTILDQSNRLDQLNQQVATLRGQNEDMANQL 92
Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
K Y + + R + V + G++ A
Sbjct: 93 TTLQKQQKDYFTDLDTRLKKFEPQQQTVDGVQGEVQPGETDAFNAASQQFRSGDFKNAAA 152
Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
F+ ++ Y ++ + A L A AL + V + +YPQ A
Sbjct: 153 SFRSFISKYPNSPYQPTAQYWLGNALYALRDYKGSTAVWQGVVAKYPQHPRAPEA 207
>gi|42522407|ref|NP_967787.1| adventurous gliding motility protein U [Bdellovibrio bacteriovorus
HD100]
gi|39574939|emb|CAE78780.1| adventurous gliding motility protein U [Bdellovibrio bacteriovorus
HD100]
Length = 1066
Score = 43.2 bits (99), Expect = 0.033, Method: Composition-based stats.
Identities = 29/233 (12%), Positives = 71/233 (30%), Gaps = 10/233 (4%)
Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
Y + R++ E+Y + + A + + + R++ L + +Q
Sbjct: 403 QNYFYAKNTQRFKTELYGWVKDYDSSGAWYAANKGNKELI---ENSYKLRETTLRNYVLQ 459
Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
A + + + ++ ++ YD
Sbjct: 460 QHQTAQNSRAQYSQSQAYEGYQLYLREFPDSATAADMHFYFGELLYDMGKYDEASMQYKW 519
Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF-------QLVL 217
+V+ S + + + + + + E+ + + V P+ Q +
Sbjct: 520 VVDNAPQSKFYGKSAQNLILSVERSIPSDQEMQKRVGNSTDPVPLEPKVDRFIKAGQWYV 579
Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
+ +E A E R+ Y D+A I +++P +A Y L+
Sbjct: 580 EKFPSSEKAVEIKFRMGRLYYQSNHFDQATAHFRDIVKQHPNTKYAEYSANLL 632
Score = 42.5 bits (97), Expect = 0.057, Method: Composition-based stats.
Identities = 10/91 (10%), Positives = 23/91 (25%)
Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
+ K R A+ ++ ++ E +A+ L
Sbjct: 151 QDEYDAKLRAFQAGKTKSKPRLDTAEAREYNKKAVQLYEWFQRDFPRDEKMSQALFFLGY 210
Query: 236 AYVALALMDEAREVVSLIQERYPQGYWARYV 266
Y L + + + + YP +
Sbjct: 211 NYFELGEVKKGADYYEKLTRGYPNSQFVGEA 241
>gi|225575069|ref|ZP_03783679.1| hypothetical protein RUMHYD_03158 [Blautia hydrogenotrophica DSM
10507]
gi|225037739|gb|EEG47985.1| hypothetical protein RUMHYD_03158 [Blautia hydrogenotrophica DSM
10507]
Length = 346
Score = 43.2 bits (99), Expect = 0.034, Method: Composition-based stats.
Identities = 23/230 (10%), Positives = 62/230 (26%), Gaps = 1/230 (0%)
Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
+ ++ + + Y + L ++ A E F + + A +
Sbjct: 113 EDAQKTSESLLELSEDAQSCYLAGRVALAVDDYDLAKENFQKVIEEDSGYQQAVQIYEAY 172
Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
A + + +YY + R +
Sbjct: 173 LERGMEADGTVYLEQALKTSPSDAKGRCEQGKIYYYMEDFDNAEKRLSEAVDGGNTEAMI 232
Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220
++ + + + + A + L G+Y +A+ Q +
Sbjct: 233 FLGEVYLSKNDLESARASYEDYIQEEEDAAQGYNGLALCDLAEGDYESALNNIQNGIQQ- 291
Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
+D E ++ + + Y + A+E + + +P A+ +
Sbjct: 292 ADTEEMQDLLFNEIVVYEKSLDFETAKEKAAEYLKMFPDDEAAQKESEFL 341
>gi|220904238|ref|YP_002479550.1| tol-pal system protein YbgF [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219868537|gb|ACL48872.1| tol-pal system protein YbgF [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 487
Score = 43.2 bits (99), Expect = 0.034, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 32/90 (35%)
Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
E IG +G+Y A+ +F+ V A+Y +A+ +
Sbjct: 391 ETFLQEYPQGTYAPNAEYWIGEGLYTQGKYREALAQFRKVDASYPQHHKNADALLKTGMC 450
Query: 237 YVALALMDEAREVVSLIQERYPQGYWARYV 266
L + A + S + R+P+ AR
Sbjct: 451 LSRLGDKEAAGQAYSQLLARFPKSEAARLA 480
>gi|260063113|ref|YP_003196193.1| hypothetical protein RB2501_16029 [Robiginitalea biformata
HTCC2501]
gi|88784682|gb|EAR15852.1| conserved hypothetical lipoprotein [Robiginitalea biformata
HTCC2501]
Length = 280
Score = 43.2 bits (99), Expect = 0.034, Method: Composition-based stats.
Identities = 42/245 (17%), Positives = 75/245 (30%), Gaps = 23/245 (9%)
Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
D +Y++ ++ KA Q + F + +
Sbjct: 24 YQKVLKDTDINRKYELAERLYQE-------GSYKKANRLLEQIAPQFVGKPQGERVMFFL 76
Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
A + G Y A E ++ YP+S +L SY + DQ T L
Sbjct: 77 ADSYFQKGDYNFAGYQFERFLKSYPKSDKAPEAAFLGAKSYYMLSPRYSLDQTDTDKALN 136
Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR------FQ 214
+ + Y S +++ A + K EI R ++K G+Y
Sbjct: 137 KLQVFINAYPESEFMEEANAMAQELTRKKQKKAFEIARQFVKLGKYYTLDYNISAIAALD 196
Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALM----------DEAREVVSLIQERYPQGYWAR 264
++++ + + EEA + A LA D A + Y + +A
Sbjct: 197 NFISDHPGSVYREEAYFLRLRAASTLAENSTPSKKKERLDNAVAAYNAFMRYYAESEFAE 256
Query: 265 YVETL 269
L
Sbjct: 257 DARQL 261
>gi|313143808|ref|ZP_07806001.1| paralysed flagella protein PflA [Helicobacter cinaedi CCUG 18818]
gi|313128839|gb|EFR46456.1| paralysed flagella protein PflA [Helicobacter cinaedi CCUG 18818]
Length = 786
Score = 43.2 bits (99), Expect = 0.034, Method: Composition-based stats.
Identities = 9/50 (18%), Positives = 18/50 (36%)
Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
Y + E + L AY + + +EA+ YP+ + +
Sbjct: 247 KKYPTDSNVPEVLYYLGNAYADMKIPNEAKYYFERTISEYPESRYMPLSK 296
>gi|226227346|ref|YP_002761452.1| hypothetical protein GAU_1940 [Gemmatimonas aurantiaca T-27]
gi|226090537|dbj|BAH38982.1| hypothetical protein [Gemmatimonas aurantiaca T-27]
Length = 285
Score = 43.2 bits (99), Expect = 0.034, Method: Composition-based stats.
Identities = 20/141 (14%), Positives = 46/141 (32%), Gaps = 14/141 (9%)
Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
G + ++ +T ++ Y S YV A+++
Sbjct: 156 AMPPTGPGPNQLFTNGMDQLNRGSTSTARTLFQELITTYPTSDYVPDAQYW--------- 206
Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
I K AA + V++ + + A A+ + + + +A+++
Sbjct: 207 -----IAESLAKENNLAAADAAYAAVVSAHPTSAKAPTALYKRAQLLLRQNNATQAKQLF 261
Query: 251 SLIQERYPQGYWARYVETLVK 271
+ +YP+ A E +K
Sbjct: 262 EQVIAKYPRSNEAALAEETLK 282
>gi|299138484|ref|ZP_07031663.1| TPR repeat-containing protein [Acidobacterium sp. MP5ACTX8]
gi|298599730|gb|EFI55889.1| TPR repeat-containing protein [Acidobacterium sp. MP5ACTX8]
Length = 322
Score = 43.2 bits (99), Expect = 0.035, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 30/94 (31%)
Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
N IG K + AA+ + +L Y D A EA
Sbjct: 218 DDLIKAYPDDNLAGNAYFYIGEINSKTQKPTAAVKSYDHLLERYPDNAKIPAAHLHKGEA 277
Query: 237 YVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
+A+ D + + +R+PQ A + +
Sbjct: 278 LLAMKQNDAGIRELRSLIQRFPQSPEASQARSKL 311
>gi|161830946|ref|YP_001596060.1| tol-pal system protein YbgF [Coxiella burnetii RSA 331]
gi|30025847|gb|AAP04427.1| 34 kDa outer membrane protein [Coxiella burnetii]
gi|161762813|gb|ABX78455.1| tol-pal system protein YbgF [Coxiella burnetii RSA 331]
Length = 300
Score = 43.2 bits (99), Expect = 0.035, Method: Composition-based stats.
Identities = 12/60 (20%), Positives = 24/60 (40%)
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
+ +Y A FQ L +Y + + A L E Y+ A +++++P+
Sbjct: 182 TKKQYDKAQASFQNYLNDYPNGSYVANAHYWLGEIYLQQKDRKNAAHEFQTVRDKFPKSE 241
Score = 42.9 bits (98), Expect = 0.052, Method: Composition-based stats.
Identities = 20/190 (10%), Positives = 56/190 (29%), Gaps = 14/190 (7%)
Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
+ + + ++ ++ + + + + S
Sbjct: 113 ELLNNQQRSFYRDLDQRITQLKNLNSNNSDSSNDNSASSSQKPSSGDTSNTNNIQLQDSN 172
Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
++ + Y N Y +A +G YL
Sbjct: 173 TYRQALDLLTKKQYDKAQASFQNYLNDYPNGSY--------------VANAHYWLGEIYL 218
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
++ + A FQ V + +E +A +L + +A+E ++ I++++P+
Sbjct: 219 QQKDRKNAAHEFQTVRDKFPKSEKVLDAKLKLAIIDAEDGKIKQAKEELTEIKKQHPEST 278
Query: 262 WARYVETLVK 271
A+ ++
Sbjct: 279 AAQLANIRLQ 288
>gi|73978161|ref|XP_539701.2| PREDICTED: similar to CG31690-PB, isoform B [Canis familiaris]
Length = 927
Score = 43.2 bits (99), Expect = 0.035, Method: Composition-based stats.
Identities = 18/229 (7%), Positives = 51/229 (22%), Gaps = 11/229 (4%)
Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
++ +Y L+ ++ ++ A + + + P +
Sbjct: 678 CSEIPDENLKDPHAHKSSVTSCLYNLGKLYHEQGHYEDALSVYKEAIQKMPRQFAPQSLY 737
Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK- 156
M K +A E + + Y + + + +A +
Sbjct: 738 NMMGEAYMRLSKLPEAEHWYMESLRSKTDHIPAHLTYGKLLALTGRKSEAEKFFLKAIEL 797
Query: 157 -----LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
+ + + + + AA
Sbjct: 798 DPTKGNCYMHYGQFLLEEARLIEAAEMAKKAAELDSTEFDVVFSAAHMLRQASLNEAAEK 857
Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR-EVVSLIQERYPQ 259
+ L + A+ L + +A + +Q + P
Sbjct: 858 YYDLAARLRPNYPA---ALMNLGAILHLNGRLQKAEANYLRALQLK-PD 902
>gi|325274585|ref|ZP_08140641.1| tol-pal system protein YbgF [Pseudomonas sp. TJI-51]
gi|324100227|gb|EGB98017.1| tol-pal system protein YbgF [Pseudomonas sp. TJI-51]
Length = 268
Score = 43.2 bits (99), Expect = 0.035, Method: Composition-based stats.
Identities = 16/111 (14%), Positives = 38/111 (34%), Gaps = 1/111 (0%)
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI-GRYYLKRGEYVAAIPRFQLVLANY 220
I ++ + F +Q A G L +G+ A F V Y
Sbjct: 156 FDLIKQKDFDKASQAFTAFLRKYPNSQYAGNAQYWLGEVNLAKGDLQGASQAFAQVSQKY 215
Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+++ +L + + D+ + ++ + +YP A+ + ++
Sbjct: 216 PKHSKVPDSLYKLADVERRMGHTDKVKSILQQVITQYPGTSAAQLAQRDLQ 266
Score = 39.0 bits (88), Expect = 0.69, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 32/78 (41%), Gaps = 1/78 (1%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ +K+ ++ A F L Y ++++A A L E +A + A + +
Sbjct: 151 YYDAAFDLIKQKDFDKASQAFTAFLRKYPNSQYAGNAQYWLGEVNLAKGDLQGASQAFAQ 210
Query: 253 IQERYPQ-GYWARYVETL 269
+ ++YP+ + L
Sbjct: 211 VSQKYPKHSKVPDSLYKL 228
Score = 38.2 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 20/97 (20%), Positives = 38/97 (39%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
D ++ Y+ A +K+++F KA + F R +P + A + V + G
Sbjct: 141 EPGDPAKEKLYYDAAFDLIKQKDFDKASQAFTAFLRKYPNSQYAGNAQYWLGEVNLAKGD 200
Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146
Q A+ + +YP+ V Y + +M
Sbjct: 201 LQGASQAFAQVSQKYPKHSKVPDSLYKLADVERRMGH 237
>gi|148265114|ref|YP_001231820.1| TPR repeat-containing protein [Geobacter uraniireducens Rf4]
gi|146398614|gb|ABQ27247.1| TPR repeat-containing protein [Geobacter uraniireducens Rf4]
Length = 1108
Score = 43.2 bits (99), Expect = 0.035, Method: Composition-based stats.
Identities = 33/266 (12%), Positives = 81/266 (30%), Gaps = 31/266 (11%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + L +F A+ L + SR+ +E +A+ E KA E
Sbjct: 1 MKRIRLLVFAIPAI--LAACQTGGSRETIAQLRNMQIEIKE---EAI----EGGLEKAME 51
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE------YITQYPESKNVDY 132
+ + ++ P + + ++ A ++ A + + +
Sbjct: 52 SYQRFLKETPESALTPAAIRRLADLKIEREYGYLTALAATQPFTPAPSPSGPVGPQGARG 111
Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
+ P + + +L R +ER+ + +T + +
Sbjct: 112 ETLSPAWERVALPSPNPSPRGRGQGVLSPFGREIERWIGRVRGTDPQSPLTESQADFEKR 171
Query: 193 EVEIGRYYLK----------------RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
+ + K R AI ++ +L Y ++ + ++ A
Sbjct: 172 TTQSPQLTAKGGKSGGLPEAGTEDLERAGTREAIALYKKLLDKYPLYPGNDQVLYQMSRA 231
Query: 237 YVALALMDEAREVVSLIQERYPQGYW 262
Y L ++A V+ + +P +
Sbjct: 232 YEELGQTEDAMGVMDRLVRDFPHSPY 257
>gi|224437345|ref|ZP_03658317.1| paralysed flagella protein PflA [Helicobacter cinaedi CCUG 18818]
Length = 781
Score = 43.2 bits (99), Expect = 0.036, Method: Composition-based stats.
Identities = 9/50 (18%), Positives = 18/50 (36%)
Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
Y + E + L AY + + +EA+ YP+ + +
Sbjct: 242 KKYPTDSNVPEVLYYLGNAYADMKIPNEAKYYFERTISEYPESRYMPLSK 291
>gi|215918886|ref|NP_819144.2| tol-pal system protein YbgF [Coxiella burnetii RSA 493]
gi|206583771|gb|AAO89658.2| tol system periplasmic component [Coxiella burnetii RSA 493]
Length = 305
Score = 43.2 bits (99), Expect = 0.036, Method: Composition-based stats.
Identities = 12/60 (20%), Positives = 24/60 (40%)
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
+ +Y A FQ L +Y + + A L E Y+ A +++++P+
Sbjct: 187 TKKQYDKAQASFQNYLNDYPNGSYVANAHYWLGEIYLQQKDRKNAAHEFQTVRDKFPKSE 246
Score = 42.9 bits (98), Expect = 0.052, Method: Composition-based stats.
Identities = 20/190 (10%), Positives = 56/190 (29%), Gaps = 14/190 (7%)
Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
+ + + ++ ++ + + + + S
Sbjct: 118 ELLNNQQRSFYRDLDQRITQLKNLNSNNSDSSNDNSASSSQKPSSGDTSNTNNIQLQDSN 177
Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
++ + Y N Y +A +G YL
Sbjct: 178 TYRQALDLLTKKQYDKAQASFQNYLNDYPNGSY--------------VANAHYWLGEIYL 223
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
++ + A FQ V + +E +A +L + +A+E ++ I++++P+
Sbjct: 224 QQKDRKNAAHEFQTVRDKFPKSEKVLDAKLKLAIIDAEDGKIKQAKEELTEIKKQHPEST 283
Query: 262 WARYVETLVK 271
A+ ++
Sbjct: 284 AAQLANIRLQ 293
>gi|164519037|ref|NP_945318.2| transmembrane and TPR repeat-containing protein 1 [Mus musculus]
Length = 942
Score = 43.2 bits (99), Expect = 0.036, Method: Composition-based stats.
Identities = 23/230 (10%), Positives = 59/230 (25%), Gaps = 11/230 (4%)
Query: 30 IAVCFLVGWERQSSRDVYLDSVTDVRY--------QREVYEKAVLFLKEQNFSKAYEYFN 81
+ + L W+ +++L + R + Y A + +A ++
Sbjct: 508 VLLLLLFSWKTVKQNEIWLSRESLFRSGVQTLPHNAKVHYNYANFLKDQGRNKEAIYHYR 567
Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
+ +P A +L A Y Q A + +
Sbjct: 568 TALKLYPRHASALNNLGTLTKDMAEAKMYYQKALQLHPQHNRALFNLGNLLKSQEKTEEA 627
Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
++++ ++ ++ + + + +
Sbjct: 628 IMLLKESIKYGPDFADAYSSLASLLAEQERFKEAEDIYQAGIKNCPDSSDLHNNYAVFLV 687
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
G A+ +Q + + A+ L Y +L +A E
Sbjct: 688 DSGFPEKAVAHYQQAIQL---SPSHHVAVVNLGRLYRSLGENSKAEEWYR 734
>gi|291612992|ref|YP_003523149.1| tol-pal system protein YbgF [Sideroxydans lithotrophicus ES-1]
gi|291583104|gb|ADE10762.1| tol-pal system protein YbgF [Sideroxydans lithotrophicus ES-1]
Length = 251
Score = 43.2 bits (99), Expect = 0.036, Method: Composition-based stats.
Identities = 27/247 (10%), Positives = 57/247 (23%), Gaps = 6/247 (2%)
Query: 28 FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV----YEKAVLFLKEQNFSKAYEYFNQC 83
F + +C V S+ + Q EV E+A+ +
Sbjct: 3 FWLLLCLCVASSHASAGLFADEDARKQVQQLEVRIVKLEQALASSDADK-EQTIRSMLDM 61
Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
+ L + + +
Sbjct: 62 QMQMEALNTELRKLRGQNEEFAHELQDAEKRQKDFYVDLDTRLRRIEAGGTTSAPADSGT 121
Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
+ + E Y N+ G A +G Y
Sbjct: 122 GAAAGQGGEERAFDAAYSFYK-AENYQNAVTAFGGFLKNYPQSAHEANVLYWMGNSYFLL 180
Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
+Y + + ++ + Y D E M E + L A+ + L+ ++P +
Sbjct: 181 KDYKSCVSSYESLAGKYPDHPRVAETMLNTAECQLGLRNKTAAKRTLKLLISKFPGSDAS 240
Query: 264 RYVETLV 270
+ +
Sbjct: 241 DKAKKRL 247
>gi|170076790|ref|YP_001733428.1| soluble lytic transglycosylase [Synechococcus sp. PCC 7002]
gi|169884459|gb|ACA98172.1| soluble lytic transglycosylase [Synechococcus sp. PCC 7002]
Length = 717
Score = 43.2 bits (99), Expect = 0.036, Method: Composition-based stats.
Identities = 22/223 (9%), Positives = 50/223 (22%), Gaps = 7/223 (3%)
Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
+ S D+ R Y + +L ++ + A F +D+P A+
Sbjct: 70 EVIANSSNNDLDRNRARYLLGMDYLVAEDGAAALAAFENLEQDYPVLTPHILIKRGRAYE 129
Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVD-------YVYYLVGMSYAQMIRDVPYDQRATK 156
+ + Q + Y +
Sbjct: 130 LVNNPEQAQVIWFDVVQNYPEDAAAAEALFRLSAYDPKYADQAIAEYPAHPRTQSLIQQR 189
Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
L R + + + + ++
Sbjct: 190 LAENPQQRDLLELRLKYDADAPDIAQVRQSLMENFADQLSPEIWQAIADSFWDQWQYADA 249
Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
Y +A + + RL + D+AR + + +P
Sbjct: 250 AQAYPNAPRTPQNLYRLARSLQVSDQPDQARPAYQTLIQTFPD 292
Score = 36.7 bits (82), Expect = 3.6, Method: Composition-based stats.
Identities = 27/222 (12%), Positives = 65/222 (29%), Gaps = 2/222 (0%)
Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
R +++ D A F + ++ A + + R +SL +S
Sbjct: 217 RQSLMENFADQLSPEIWQAIADSFWDQWQYADAAQAYPNAPRTPQNLYRLARSLQVSDQP 276
Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA--QMIRDVPYDQRATKLMLQY 161
+ YQ + + + + Q + P + +
Sbjct: 277 DQARPAYQTLIQTFPDAPETGLGLRRLASLVNDTEALTYLDQAAQKFPEEAPSALFAKAD 336
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
+ + ++ + ++ + Y + G Y AI + +
Sbjct: 337 LLEKLGSNRSASQTREQALNTHKDQSATTEYRWQQAERYAQEGNYTQAIEWAKAIATLTP 396
Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
D A E++ + + L A++ + YP+ Y+A
Sbjct: 397 DHTLAAESIFWTGKWHQQLGETQAAKQAFQQTLKDYPESYYA 438
>gi|15838493|ref|NP_299181.1| hypothetical protein XF1895 [Xylella fastidiosa 9a5c]
gi|9106988|gb|AAF84701.1|AE004009_8 conserved hypothetical protein [Xylella fastidiosa 9a5c]
Length = 271
Score = 43.2 bits (99), Expect = 0.036, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 27/70 (38%), Gaps = 2/70 (2%)
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
K +Y A F L Y + + A+ L E+Y A+ A + RYP
Sbjct: 156 KNSKYADAAELFLSFLQLYPNGVYTPNALYWLGESYYAMHDFVSAEAQFRSLLSRYPTHD 215
Query: 262 WARYVETLVK 271
+ +L+K
Sbjct: 216 --KASGSLLK 223
Score = 37.9 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 23/234 (9%), Positives = 59/234 (25%), Gaps = 12/234 (5%)
Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
++ + D+R Q + ++ ++ + + L
Sbjct: 40 SDPQVNIDLINQINDLRSQIRQMQGSIEEMQHG-----------YEQLKQQSKDQYLDLD 88
Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
S + + L P N + +
Sbjct: 89 SRLKPIESGSVKEPSRVLANPISQVSPSHFNQPIAMSEQSPNIHGDASALTISNEERIAY 148
Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI-GRYYLKRGEYVAAIPRFQLVL 217
+ F + G Y ++V+A +F+ +L
Sbjct: 149 NVAFDALKNSKYADAAELFLSFLQLYPNGVYTPNALYWLGESYYAMHDFVSAEAQFRSLL 208
Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+ Y + A ++ + D+A+ + + +YP AR + ++
Sbjct: 209 SRYPTHDKASGSLLKEALCQANQGKNDDAQHSLEQVLSQYPGTDAARLAQERLQ 262
>gi|34556913|ref|NP_906728.1| flagellar functional protein [Wolinella succinogenes DSM 1740]
gi|34482628|emb|CAE09628.1| FLAGELLAR FUNCTIONAL PROTEIN [Wolinella succinogenes]
Length = 778
Score = 43.2 bits (99), Expect = 0.036, Method: Composition-based stats.
Identities = 26/230 (11%), Positives = 63/230 (27%), Gaps = 6/230 (2%)
Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKA-YEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
L D + ++Y A+ + +N A L+ ++
Sbjct: 294 DELLKRGDNKRAPQLYTDALN--ESKNLETASLAAVRLADYQISKKNFKEAESLLLKVLE 351
Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
+ +Q+ S + ++ + + + + D D+R + +
Sbjct: 352 ANPSHFQKEPSKTHAMLERWVDQGFYGASARIAEELWKGKVEDDDLDERLIRQAGIWYEA 411
Query: 165 I-VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
+ Y Y + + + + L + R V+ +Y
Sbjct: 412 AERFDDAHRIYRLYKEKYANRSAIKEIIERDDKLLFVLDENNATKRLERLDHVIKSYPGT 471
Query: 224 EHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ--GYWARYVETLVK 271
A R E Y L + E+ + +P + + +K
Sbjct: 472 PEERRAYERKAETYAELGEYPKVLEIERHLDPNHPALLSSATKLAQEALK 521
>gi|209364238|ref|YP_001425324.2| tol system periplasmic component [Coxiella burnetii Dugway
5J108-111]
gi|212219429|ref|YP_002306216.1| tol system periplasmic component [Coxiella burnetii CbuK_Q154]
gi|207082171|gb|ABS78351.2| tol system periplasmic component [Coxiella burnetii Dugway
5J108-111]
gi|212013691|gb|ACJ21071.1| tol system periplasmic component [Coxiella burnetii CbuK_Q154]
Length = 305
Score = 43.2 bits (99), Expect = 0.036, Method: Composition-based stats.
Identities = 12/60 (20%), Positives = 24/60 (40%)
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
+ +Y A FQ L +Y + + A L E Y+ A +++++P+
Sbjct: 187 TKKQYDKAQASFQNYLNDYPNGSYVANAHYWLGEIYLQQKDRKNAAHEFQTVRDKFPKSE 246
Score = 42.9 bits (98), Expect = 0.054, Method: Composition-based stats.
Identities = 20/190 (10%), Positives = 56/190 (29%), Gaps = 14/190 (7%)
Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
+ + + ++ ++ + + + + S
Sbjct: 118 ELLNNQQRSFYRDLDQRITQLKNLNSNNSDSSNDNSASSSQKPSSGDTSNTNNIQLQDSN 177
Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
++ + Y N Y +A +G YL
Sbjct: 178 TYRQALDLLTKKQYDKAQASFQNYLNDYPNGSY--------------VANAHYWLGEIYL 223
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
++ + A FQ V + +E +A +L + +A+E ++ I++++P+
Sbjct: 224 QQKDRKNAAHEFQTVRDKFPKSEKVLDAKLKLAIIDAEDGKIKQAKEELTEIKKQHPEST 283
Query: 262 WARYVETLVK 271
A+ ++
Sbjct: 284 AAQLANIRLQ 293
>gi|123788588|sp|Q3UV71|TMTC1_MOUSE RecName: Full=Transmembrane and TPR repeat-containing protein 1
gi|74210446|dbj|BAE23402.1| unnamed protein product [Mus musculus]
Length = 942
Score = 43.2 bits (99), Expect = 0.036, Method: Composition-based stats.
Identities = 23/230 (10%), Positives = 59/230 (25%), Gaps = 11/230 (4%)
Query: 30 IAVCFLVGWERQSSRDVYLDSVTDVRY--------QREVYEKAVLFLKEQNFSKAYEYFN 81
+ + L W+ +++L + R + Y A + +A ++
Sbjct: 508 VLLLLLFSWKTVKQNEIWLSRESLFRSGVQTLPHNAKVHYNYANFLKDQGRNKEAIYHYR 567
Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
+ +P A +L A Y Q A + +
Sbjct: 568 TALKLYPRHASALNNLGTLTKDMAEAKMYYQKALQLHPQHNRALFNLGNLLKSQEKTEEA 627
Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
++++ ++ ++ + + + +
Sbjct: 628 IMLLKESIKYGPDFADAYSSLASLLAEQERFKEAEDIYQAGIKNCPDSSDLHNNYAVFLV 687
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
G A+ +Q + + A+ L Y +L +A E
Sbjct: 688 DSGFPEKAVAHYQQAIQL---SPSHHVAVVNLGRLYRSLGENSKAEEWYR 734
>gi|206603160|gb|EDZ39640.1| Protein of unknown function [Leptospirillum sp. Group II '5-way
CG']
Length = 719
Score = 43.2 bits (99), Expect = 0.037, Method: Composition-based stats.
Identities = 12/68 (17%), Positives = 23/68 (33%)
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
Y ++G + A ++ S++ EA+ R+ L + + YP
Sbjct: 260 YADRKGHHRRAFALYREFRRFGSESPLVPEALYRMGILSGKLGKPRSMEARLLEVVHEYP 319
Query: 259 QGYWARYV 266
WA
Sbjct: 320 TTRWADRA 327
>gi|237719026|ref|ZP_04549507.1| RagB/SusD domain-containing protein [Bacteroides sp. 2_2_4]
gi|229451804|gb|EEO57595.1| RagB/SusD domain-containing protein [Bacteroides sp. 2_2_4]
Length = 483
Score = 43.2 bits (99), Expect = 0.037, Method: Composition-based stats.
Identities = 25/259 (9%), Positives = 65/259 (25%), Gaps = 22/259 (8%)
Query: 9 ICIFEAWAYQLYKFALTIFFSIAVCFLVGW---------ERQSSRDVYLDSVTDVRYQRE 59
+ + + + K L I + + L + + Y +
Sbjct: 2 VFLLTSKNRNIMKKYLLI-LAFSCLTLCSCDNFLDLTPQSVLTPENAYEKPEDWQQTLYA 60
Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
Y ++ F V + +A+ Q + + +
Sbjct: 61 AYGTLQEVF-VGKYTITLTEF-------GTDEVIPFDMGWAAYSQLHYYTFSASHEFLDN 112
Query: 120 YITQ-YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
+ Y K + V + + + + Q + Y +V Y P +
Sbjct: 113 HYRLCYEGIKRCNAVIDMPSDAVSADLHSSMIMQARFLRAIYYF-DLVRMYGGVPLWTKS 171
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
+ A + + + +A +A+ L Y+
Sbjct: 172 SIDRSEIMKPRATVDEVYTLITQDMEAALGLPTSWPNAQDKGRATSYAAQAL--LARIYL 229
Query: 239 ALALMDEAREVVSLIQERY 257
EA + +++ ++
Sbjct: 230 QWGKPGEALKYCRMLEGKF 248
>gi|154247010|ref|YP_001417968.1| Tol-Pal system YbgF [Xanthobacter autotrophicus Py2]
gi|154161095|gb|ABS68311.1| Tol-Pal system YbgF [Xanthobacter autotrophicus Py2]
Length = 307
Score = 43.2 bits (99), Expect = 0.037, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 24/56 (42%)
Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
R Y A F V Y ++ A EA+ RL ++ L + A + + +YP
Sbjct: 233 RQNYGDAAASFLEVSTKYPNSTRAPEALLRLGQSLAGLGEKETACATLQEVDRKYP 288
>gi|167035187|ref|YP_001670418.1| tol-pal system protein YbgF [Pseudomonas putida GB-1]
gi|166861675|gb|ABZ00083.1| tol-pal system protein YbgF [Pseudomonas putida GB-1]
Length = 268
Score = 43.2 bits (99), Expect = 0.037, Method: Composition-based stats.
Identities = 16/111 (14%), Positives = 38/111 (34%), Gaps = 1/111 (0%)
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI-GRYYLKRGEYVAAIPRFQLVLANY 220
I ++ + F +Q A G L +G+ A F V Y
Sbjct: 156 FDLIKQKDFDKASQAFNAFLRKYPNSQYAGNAQYWLGEVNLAKGDLPGASQAFAQVSQKY 215
Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+++ +L + + D+ + ++ + +YP A+ + ++
Sbjct: 216 PKHSKVPDSLYKLADVERRMGHTDKVKGILQQVITQYPGTSAAQLAQRDLQ 266
Score = 39.0 bits (88), Expect = 0.66, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 34/84 (40%)
Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
D ++ Y+ A +K+++F KA + FN R +P + A + V + G
Sbjct: 140 SEPGDPAKEKLYYDAAFDLIKQKDFDKASQAFNAFLRKYPNSQYAGNAQYWLGEVNLAKG 199
Query: 109 KYQQAASLGEEYITQYPESKNVDY 132
A+ + +YP+ V
Sbjct: 200 DLPGASQAFAQVSQKYPKHSKVPD 223
Score = 38.6 bits (87), Expect = 0.81, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 32/78 (41%), Gaps = 1/78 (1%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ +K+ ++ A F L Y ++++A A L E +A + A + +
Sbjct: 151 YYDAAFDLIKQKDFDKASQAFNAFLRKYPNSQYAGNAQYWLGEVNLAKGDLPGASQAFAQ 210
Query: 253 IQERYPQ-GYWARYVETL 269
+ ++YP+ + L
Sbjct: 211 VSQKYPKHSKVPDSLYKL 228
>gi|73541317|ref|YP_295837.1| transmembrane protein [Ralstonia eutropha JMP134]
gi|72118730|gb|AAZ60993.1| probable transmembrane protein [Ralstonia eutropha JMP134]
Length = 284
Score = 43.2 bits (99), Expect = 0.037, Method: Composition-based stats.
Identities = 17/129 (13%), Positives = 40/129 (31%), Gaps = 2/129 (1%)
Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
+ P ++ L++ + + + + Y LA +G
Sbjct: 155 RQGTSAPGEKPEYDAALRHFQAGDFKSAGNSFSSFIKKYPQSPYVPLAQY--WLGNSLYA 212
Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
+ +Y + Q ++ +AM + + AR+ + + +YP
Sbjct: 213 QRDYKGSTWVLQQMIHANPTHPKVPDAMIAVANNQLESGQKPAARKTLEQVVAKYPGTEG 272
Query: 263 ARYVETLVK 271
AR +K
Sbjct: 273 ARTANNRLK 281
Score = 38.2 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 11/74 (14%), Positives = 26/74 (35%)
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
Y+ A+ + +F A F+ + +P + + Y+ Y+ + + ++
Sbjct: 167 YDAALRHFQAGDFKSAGNSFSSFIKKYPQSPYVPLAQYWLGNSLYAQRDYKGSTWVLQQM 226
Query: 121 ITQYPESKNVDYVY 134
I P V
Sbjct: 227 IHANPTHPKVPDAM 240
>gi|116748792|ref|YP_845479.1| TPR repeat-containing protein [Syntrophobacter fumaroxidans MPOB]
gi|116697856|gb|ABK17044.1| Tetratricopeptide TPR_2 repeat protein [Syntrophobacter
fumaroxidans MPOB]
Length = 485
Score = 43.2 bits (99), Expect = 0.037, Method: Composition-based stats.
Identities = 32/255 (12%), Positives = 68/255 (26%), Gaps = 12/255 (4%)
Query: 28 FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87
+ + WE S+ ++ Y + +Y+ A L S+A E N+C +
Sbjct: 222 LPLFAAAVRNWEAYSAEEMKARHQERKNYVKALYQLASCELDAGKPSRALETLNRCLLED 281
Query: 88 PFAGVARKSLLMSA-----FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
+G A F QA S + + + +
Sbjct: 282 EESGFFSTVHKYFALGKVRFELGDMEASVQALSFAASQAVPEEDDYVFELLARVHLCRGN 341
Query: 143 QMIRDVPYDQRATKLMLQYMS-----RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
++ K Y ++ R K R + +
Sbjct: 342 GDKAWEAVNRVPLKRRRPYFRWTEAEVLIARGEWERARKVLAEAAERDRRGRHKALLRLA 401
Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAE--EAMARLVEAYVALALMDEAREVVSLIQE 255
R + Y + + + + + + A + L +DEA + +
Sbjct: 402 RLEFRLCRYDQCLKWAKDADNFFRNQFQNPCGDGLFWQAAALLRLGRLDEAENAARKLAK 461
Query: 256 RYPQGYWARYVETLV 270
P+ + L+
Sbjct: 462 YMPRHPHLGRLRDLI 476
>gi|75909502|ref|YP_323798.1| hypothetical protein Ava_3295 [Anabaena variabilis ATCC 29413]
gi|75703227|gb|ABA22903.1| TPR repeat protein [Anabaena variabilis ATCC 29413]
Length = 311
Score = 43.2 bits (99), Expect = 0.037, Method: Composition-based stats.
Identities = 28/225 (12%), Positives = 60/225 (26%), Gaps = 9/225 (4%)
Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
D Y + + A + F + ++ P +A +L S + +
Sbjct: 75 DPNLAAAHYNLGLALRQTGQLQPAADAFYRATQSDPNFALAFANLGGSLLEGNNLQQAND 134
Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM---LQYMSRIVERY 169
E + + + ++ I +K Y+ +
Sbjct: 135 YLQRALELEPRLGFAHYNLGLVRQQQQNWEGAIASFQKAVELSKNAPEPHYYLGLCYLQL 194
Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
K A + + +G +G A+ F+ + A
Sbjct: 195 GKLDEAKNAFNQAIKINPRYSEAHYNLGVILFNQGNSQEALIAFRNSAEANPNYP---NA 251
Query: 230 MARLVEAYVALALMDEAREVVSLIQERYP---QGYWARYVETLVK 271
+ L EA +V + + Y WA+ E L++
Sbjct: 252 YYGAGLVFTQLNQYSEAAKVFNHARNLYNTQGNPQWAKNSEQLLQ 296
Score = 40.9 bits (93), Expect = 0.20, Method: Composition-based stats.
Identities = 26/253 (10%), Positives = 57/253 (22%), Gaps = 10/253 (3%)
Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
Y+ Y+ + + L L + + + + + ++
Sbjct: 5 FYK-YRIVALLSLILLGECLTPANATIPAIPKLLAQYSLPTAPTLLNQGLQAIQAGRIQD 63
Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY---ITQYPESKNVDY 132
A F + P A +L ++ A + +
Sbjct: 64 AIAAFQSAIQLDPNLAAAHYNLGLALRQTGQLQPAADAFYRATQSDPNFALAFANLGGSL 123
Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
+ ++ + + + ++ N +
Sbjct: 124 LEGNNLQQANDYLQRALELEPRLGFAHYNLGLVRQQQQNWEGAIASFQKAVELSKNAPEP 183
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+G YL+ G+ A F + EA L EA
Sbjct: 184 HYYLGLCYLQLGKLDEAKNAFNQAIKINPRYS---EAHYNLGVILFNQGNSQEALIAFRN 240
Query: 253 IQE---RYPQGYW 262
E YP Y+
Sbjct: 241 SAEANPNYPNAYY 253
>gi|212213379|ref|YP_002304315.1| Tol system periplasmic component [Coxiella burnetii CbuG_Q212]
gi|212011789|gb|ACJ19170.1| Tol system periplasmic component [Coxiella burnetii CbuG_Q212]
Length = 305
Score = 43.2 bits (99), Expect = 0.038, Method: Composition-based stats.
Identities = 12/60 (20%), Positives = 24/60 (40%)
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
+ +Y A FQ L +Y + + A L E Y+ A +++++P+
Sbjct: 187 TKKQYDKAQASFQNYLNDYPNGSYVANAHYWLGEIYLQQKDRKNAAHEFQTVRDKFPKSE 246
Score = 42.9 bits (98), Expect = 0.056, Method: Composition-based stats.
Identities = 20/190 (10%), Positives = 56/190 (29%), Gaps = 14/190 (7%)
Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
+ + + ++ ++ + + + + S
Sbjct: 118 ELLNNQQRSFYRDLDQRITQLKNLNSNNSDSSNDNSASSSQKPSSGDTSNTNNIQLQDSN 177
Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
++ + Y N Y +A +G YL
Sbjct: 178 TYRQALDLLTKKQYDKAQASFQNYLNDYPNGSY--------------VANAHYWLGEIYL 223
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
++ + A FQ V + +E +A +L + +A+E ++ I++++P+
Sbjct: 224 QQKDRKNAAHEFQTVRDKFPKSEKVLDAKLKLAIIDAEDGKIKQAKEELTEIKKQHPEST 283
Query: 262 WARYVETLVK 271
A+ ++
Sbjct: 284 AAQLANIRLQ 293
>gi|153005970|ref|YP_001380295.1| hypothetical protein Anae109_3115 [Anaeromyxobacter sp. Fw109-5]
gi|152029543|gb|ABS27311.1| Tetratricopeptide TPR_2 repeat protein [Anaeromyxobacter sp.
Fw109-5]
Length = 308
Score = 43.2 bits (99), Expect = 0.038, Method: Composition-based stats.
Identities = 21/104 (20%), Positives = 36/104 (34%)
Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
L T + + A +G Y A+ F V
Sbjct: 181 ALARAQEQQGNKTVARELYEQYVAQFPADPASAEAHFRLGELAFGERRYRDAVLEFGKVA 240
Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
+ + A +A+ R EA + L + +EA+ V+S + +RYP
Sbjct: 241 REFPRSGKAPDALVRTGEAMLQLDMREEAKTVLSEVPQRYPGTP 284
>gi|90579367|ref|ZP_01235177.1| Hypothetical fimbrial biogenesis and twitching motility protein
[Vibrio angustum S14]
gi|90440200|gb|EAS65381.1| Hypothetical fimbrial biogenesis and twitching motility protein
[Vibrio angustum S14]
Length = 252
Score = 43.2 bits (99), Expect = 0.038, Method: Composition-based stats.
Identities = 26/241 (10%), Positives = 76/241 (31%), Gaps = 9/241 (3%)
Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
++ G D + + + + +LK+ + +A E
Sbjct: 9 LLSCLLFTGCATVDVVDNGKEFDAKAASEARL-NLGLNYLKDGQWERARE---NLEIALR 64
Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
+ ++ + A+ G+ A + + + P++ +V Y + S + +
Sbjct: 65 YDPDYYRAQISMAYYYQKVGEKDAADKMYRKVLKHSPKNGDVLNNYGVFLCSEGRYDEAI 124
Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA-AKEVEIGRYYLKRGEYV 207
+A + Y+ K G + A + + R L+ +
Sbjct: 125 AAFVKAIEQPYYYLISASYENAGLCSRKQGNLEAATGYFENALSHDPYRPRSMLQLAQVE 184
Query: 208 AAIPRFQ----LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
F+ + + +++ L++ + ++++ L++E+YP
Sbjct: 185 IESNNFKDARVQLFKFNKRYGYTADSLWLLIQLERQAGRLTQSKKYAILLKEKYPDSLQY 244
Query: 264 R 264
+
Sbjct: 245 Q 245
>gi|20090723|ref|NP_616798.1| hypothetical protein MA1873 [Methanosarcina acetivorans C2A]
gi|19915778|gb|AAM05278.1| conserved hypothetical protein [Methanosarcina acetivorans C2A]
Length = 306
Score = 43.2 bits (99), Expect = 0.038, Method: Composition-based stats.
Identities = 23/197 (11%), Positives = 51/197 (25%), Gaps = 6/197 (3%)
Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
+Y K LK + + +A E F + + P ++ + +A
Sbjct: 84 ALYHKGNSLLKLKRYEEALEIFERAAEIKPENAGLWTNMGFALKKLERFRDALEAFEKSI 143
Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPY---DQRATKLMLQYMSRIVERYTNSPYV 175
+ + + + + L ++ R+
Sbjct: 144 SLNPVQKNAWEGKDSVLSLISLCEEKLSEYEKILERNPGDPDALFKTGKLWLRFGEQEKA 203
Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
A + + A G+ K G A+ F+ D EA +
Sbjct: 204 MQAFKNALEVKPENAEAWKLRGKILFKAGSEKEALHAFENATRLKPD---HPEAWYERGK 260
Query: 236 AYVALALMDEAREVVSL 252
++ L + A +
Sbjct: 261 VFLKLGNLRAAENAFKI 277
>gi|154147891|ref|YP_001406275.1| TPR repeat-containing protein [Campylobacter hominis ATCC BAA-381]
gi|153803900|gb|ABS50907.1| TPR repeat-containing protein [Campylobacter hominis ATCC BAA-381]
Length = 272
Score = 43.2 bits (99), Expect = 0.038, Method: Composition-based stats.
Identities = 13/101 (12%), Positives = 33/101 (32%)
Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
+ + K Y+ Q A +G Y AI +Q +++ +
Sbjct: 168 LYSKKDYSGAKECYEYLVSKNYQPAKSNFMLGEISYFGKSYGEAIKYYQTSISHSQTQPY 227
Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
+ + ++ + + A + + ++ YP A+
Sbjct: 228 TPKLLYHTAISFDKIGDTNSANKFYNALKSAYPDSKEAKSS 268
>gi|149278745|ref|ZP_01884880.1| hypothetical protein PBAL39_06201 [Pedobacter sp. BAL39]
gi|149230364|gb|EDM35748.1| hypothetical protein PBAL39_06201 [Pedobacter sp. BAL39]
Length = 1005
Score = 43.2 bits (99), Expect = 0.038, Method: Composition-based stats.
Identities = 27/211 (12%), Positives = 56/211 (26%), Gaps = 23/211 (10%)
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
Y A +++ + KA YF + R + Y + Y
Sbjct: 518 YALAYAAFEDERYGKAASYFERFLRGNDKDTKTVNDATLRLADAYFVN---------KSY 568
Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
+ + + + M ++++Y NS Y A F
Sbjct: 569 GNALTNYNKIIANKGAGEDYALFQRGMIQGLENQNDAKINTMQELLQQYPNSNYADDAGF 628
Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
E Y +G++ + +++ Y + + A+ +
Sbjct: 629 --------------ETAYTYFNKGDFDKSRSDLTGLISKYPRSSYVPRALVTIGLVQYNQ 674
Query: 241 ALMDEAREVVSLIQERYPQGYWARYVETLVK 271
D A E + Y A+ +K
Sbjct: 675 DQDDAALETFKKVINEYGSSEEAKQSLESIK 705
>gi|152997603|ref|YP_001342438.1| TPR repeat-containing protein [Marinomonas sp. MWYL1]
gi|150838527|gb|ABR72503.1| Tetratricopeptide TPR_2 repeat protein [Marinomonas sp. MWYL1]
Length = 603
Score = 43.2 bits (99), Expect = 0.038, Method: Composition-based stats.
Identities = 22/251 (8%), Positives = 56/251 (22%), Gaps = 9/251 (3%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAV-LFLKEQNF---- 73
+ K L F +++ L + ++ L D + L F
Sbjct: 25 ITKGVLLFFTLLSLPLLSACSQNTALQNTLSPSVDTPKAETFANQGKIKELLNAEFTLQR 84
Query: 74 SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
+ F +G ++ S S +
Sbjct: 85 EGPNKAFEAFYELASQSGDITLIERLTHIAVVSQNHLYIERSANLWLSVDPTSATAYSLK 144
Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
++ + I + + K
Sbjct: 145 LQVLIKDNRAEEVTTLLTNAIRHKVSLRFLPIYLEDNVRDSDQVNTIESAIYALSPELKN 204
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANY----SDAEHAEEAMARLVEAYVALALMDEAREV 249
+ + ++ + + + + E +E L + +L DEA +
Sbjct: 205 NQYIQVSYAHILLLSGKYQLAINTSEQLLAKPNTEKSEALYLILAFSQKSLGQTDEAIKT 264
Query: 250 VSLIQERYPQG 260
+ + +P+
Sbjct: 265 LQTASKHFPKN 275
>gi|254284172|ref|ZP_04959140.1| type IV pilus biogenesis/stability protein PilW [gamma
proteobacterium NOR51-B]
gi|219680375|gb|EED36724.1| type IV pilus biogenesis/stability protein PilW [gamma
proteobacterium NOR51-B]
Length = 256
Score = 43.2 bits (99), Expect = 0.038, Method: Composition-based stats.
Identities = 17/253 (6%), Positives = 61/253 (24%), Gaps = 4/253 (1%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + ++ + + + L +S+ + + +R V A ++ E ++ A
Sbjct: 1 MNRLSIVLVTLLVMGLLPACVTESTGGYTNEPSPEKALERRV-SLARQYIGEGDWENAKR 59
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+ ++ + + + ++N +
Sbjct: 60 NLELAEEIDGDSAEVHEAFGLVYQSTGEYERADARFQRALKIDPSLSRARNNYAAFLFSR 119
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
+ + + + ++ + R + I
Sbjct: 120 GRFEEAEAQFERVTVDSLYSGRPLAFVNLGLARLRLNDDEGAEAAFSRALSMDRTNPIAL 179
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDA---EHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
+ + A + A+ ++ A D ++
Sbjct: 180 LEMGFLRFAAGDIASADRYYGVYRTVVARQSPRALLLGIDIAEAKGDNDARSSYEMTLRN 239
Query: 256 RYPQGYWARYVET 268
YPQ + ++
Sbjct: 240 LYPQSPEYQAYQS 252
>gi|46203194|ref|ZP_00208847.1| COG1729: Uncharacterized protein conserved in bacteria
[Magnetospirillum magnetotacticum MS-1]
Length = 335
Score = 43.2 bits (99), Expect = 0.038, Method: Composition-based stats.
Identities = 22/108 (20%), Positives = 42/108 (38%), Gaps = 5/108 (4%)
Query: 157 LMLQYMSRIVERYTNSPY----VKGARFYVTVGRNQLAAKEVEI-GRYYLKRGEYVAAIP 211
Y + +F + R++L K G YL+R A
Sbjct: 208 DAQADFEAAYALVRERQYEQAEMSLRQFIQSHPRDRLVPKATYWLGESYLQRNRSREAAE 267
Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
+F V +Y+++ A EAM +L + AL +A ++ ++ ++P
Sbjct: 268 QFLKVSTDYANSPIAPEAMLKLGASLHALGAKAQACATLAEVERKFPS 315
Score = 39.8 bits (90), Expect = 0.37, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 25/78 (32%)
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
A + E ++ +Y A + + ++ +A L E+Y+ EA E
Sbjct: 208 DAQADFEAAYALVRERQYEQAEMSLRQFIQSHPRDRLVPKATYWLGESYLQRNRSREAAE 267
Query: 249 VVSLIQERYPQGYWARYV 266
+ Y A
Sbjct: 268 QFLKVSTDYANSPIAPEA 285
>gi|302038647|ref|YP_003798969.1| putative tol-Pal system protein YbgF [Candidatus Nitrospira
defluvii]
gi|300606711|emb|CBK43044.1| putative Tol-Pal system protein YbgF [Candidatus Nitrospira
defluvii]
Length = 259
Score = 43.2 bits (99), Expect = 0.039, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 33/78 (42%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+G Y + +Y+ A+ F+ V+ Y+ E A+ +L + ++R+ +
Sbjct: 178 HYWLGESYYGQKDYIRAMQSFEHVVNEYAGNEKVPAALFKLGLSAAETGDTAKSRKYLKR 237
Query: 253 IQERYPQGYWARYVETLV 270
+ E Y A+ + +
Sbjct: 238 VIEEYSTSDEAKLAKAKM 255
>gi|189423894|ref|YP_001951071.1| tol-pal system protein YbgF [Geobacter lovleyi SZ]
gi|189420153|gb|ACD94551.1| tol-pal system protein YbgF [Geobacter lovleyi SZ]
Length = 271
Score = 43.2 bits (99), Expect = 0.039, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 33/79 (41%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
IG Y Y AI FQ V+ Y E A AM + ++ AL + + ++
Sbjct: 190 RYWIGETYYGEKNYEQAILEFQEVVKQYPKKEKAPAAMLKQALSFKALKDLKSTQYLLKR 249
Query: 253 IQERYPQGYWARYVETLVK 271
+ YP+ A+ ++K
Sbjct: 250 LIGDYPKSDEAKKARVILK 268
>gi|17231874|ref|NP_488422.1| hypothetical protein all4382 [Nostoc sp. PCC 7120]
gi|17133518|dbj|BAB76081.1| all4382 [Nostoc sp. PCC 7120]
Length = 311
Score = 43.2 bits (99), Expect = 0.039, Method: Composition-based stats.
Identities = 23/222 (10%), Positives = 53/222 (23%), Gaps = 3/222 (1%)
Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
D Y + + A + F + ++ P +A +L S + +
Sbjct: 75 DPNLAAAHYNLGLALRQTGQLQPAADAFYRATQSDPNFALAFANLGGSLLEGNNLQQAND 134
Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
E + + + ++ I +K + + Y
Sbjct: 135 YLQRALELEPRLGFAHYNLGLVRQQQQNWEGAIASFQKAVELSKNAPEPHYYLGISYLQQ 194
Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232
+ A+ + + + A
Sbjct: 195 GKLNEAKNAFNQAIKINPRYSEAYYNLGVVLFNQGQPQEALTAFRKSAEANPNYPNAYYG 254
Query: 233 LVEAYVALALMDEAREVVSLIQERYP---QGYWARYVETLVK 271
+ L EA +V + + Y WA+ E L++
Sbjct: 255 AGLVFTQLNQYGEAAKVFNHAKNLYSTQGNPQWAKNAEQLLQ 296
>gi|319779139|ref|YP_004130052.1| TPR repeat containing exported protein [Taylorella equigenitalis
MCE9]
gi|317109163|gb|ADU91909.1| TPR repeat containing exported protein [Taylorella equigenitalis
MCE9]
Length = 220
Score = 43.2 bits (99), Expect = 0.039, Method: Composition-based stats.
Identities = 11/77 (14%), Positives = 30/77 (38%)
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
G ++ +I ++ Y + A +A+ + + L ++E + ++ I
Sbjct: 141 FYEGGSRYAIKDFKGSISTLNRMVEQYPNDPQAGDALLVIAGNHYELNNINEYKSTLNRI 200
Query: 254 QERYPQGYWARYVETLV 270
++YP A + +
Sbjct: 201 IKQYPGTPAADTAKERL 217
>gi|330502227|ref|YP_004379096.1| TPR repeat-containing protein [Pseudomonas mendocina NK-01]
gi|328916513|gb|AEB57344.1| TPR repeat-containing protein [Pseudomonas mendocina NK-01]
Length = 209
Score = 43.2 bits (99), Expect = 0.039, Method: Composition-based stats.
Identities = 21/111 (18%), Positives = 40/111 (36%), Gaps = 1/111 (0%)
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI-GRYYLKRGEYVAAIPRFQLVLANY 220
I + + A F +Q A G L +G+ AA F V Y
Sbjct: 97 FDLIKAKDFDKASQAFAAFLNRYPNSQYAGNAQYWLGEVNLAKGDLQAAGQAFAKVSQAY 156
Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+++ +L + L D+AR ++ + +YP A+ + ++
Sbjct: 157 PSHAKVPDSLFKLADVERRLGHNDKARGILQQVIAQYPGSSAAQLAQRDLQ 207
Score = 37.1 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 13/67 (19%), Positives = 27/67 (40%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ +K ++ A F L Y ++++A A L E +A + A + +
Sbjct: 92 YYDAAFDLIKAKDFDKASQAFAAFLNRYPNSQYAGNAQYWLGEVNLAKGDLQAAGQAFAK 151
Query: 253 IQERYPQ 259
+ + YP
Sbjct: 152 VSQAYPS 158
Score = 36.7 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 17/83 (20%), Positives = 29/83 (34%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
D ++ Y+ A +K ++F KA + F +P + A + V + G
Sbjct: 82 EPGDPAKEKLYYDAAFDLIKAKDFDKASQAFAAFLNRYPNSQYAGNAQYWLGEVNLAKGD 141
Query: 110 YQQAASLGEEYITQYPESKNVDY 132
Q A + YP V
Sbjct: 142 LQAAGQAFAKVSQAYPSHAKVPD 164
>gi|225850549|ref|YP_002730783.1| hypothetical protein PERMA_0997 [Persephonella marina EX-H1]
gi|225646376|gb|ACO04562.1| conserved hypothetical protein [Persephonella marina EX-H1]
Length = 300
Score = 43.2 bits (99), Expect = 0.039, Method: Composition-based stats.
Identities = 20/122 (16%), Positives = 47/122 (38%), Gaps = 8/122 (6%)
Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
+Q + K + ++L + Y + +YV AI F+ +
Sbjct: 29 KGIQLYKKGDYEEAKDLLKKSIYKVKGLTADELMKARFYLADSYYREEQYVDAIVEFEEL 88
Query: 217 LANYSDAEHAEEAMARLVEAYVA--------LALMDEAREVVSLIQERYPQGYWARYVET 268
+ + A +EA+ +L ++Y+ ++ ++A E + E YP +A +
Sbjct: 89 ITLFPTAPFMDEALYKLADSYLKISPGVDRDMSYPEKALEKAEELIENYPDSKYAAKAKK 148
Query: 269 LV 270
++
Sbjct: 149 II 150
Score = 40.2 bits (91), Expect = 0.32, Method: Composition-based stats.
Identities = 47/230 (20%), Positives = 82/230 (35%), Gaps = 12/230 (5%)
Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85
+ + F+ ++ + + Y++ YE+A LK+ +
Sbjct: 4 LILLLLTVFVFSCAQKEFVEKDVLHKGIQLYKKGDYEEAKDLLKKSIYK----------V 53
Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
A K+ A Y +Y A EE IT +P + +D Y + SY ++
Sbjct: 54 KGLTADELMKARFYLADSYYREEQYVDAIVEFEELITLFPTAPFMDEALYKLADSYLKIS 113
Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
V D + L+ ++E Y +S Y A+ + A +EI + Y K G+
Sbjct: 114 PGVDRDMSYPEKALEKAEELIENYPDSKYAAKAKKIIHTVNKMKADHILEIAQLYEKLGK 173
Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA--LALMDEAREVVSLI 253
Y +A +QL Y D +L + DE E +I
Sbjct: 174 YYSASRYYQLAYDQYEDFIDKPFVEFKLAYNLMKTENQYKDEMDEYKEMI 223
>gi|225011907|ref|ZP_03702345.1| TPR repeat-containing protein [Flavobacteria bacterium MS024-2A]
gi|225004410|gb|EEG42382.1| TPR repeat-containing protein [Flavobacteria bacterium MS024-2A]
Length = 1008
Score = 43.2 bits (99), Expect = 0.039, Method: Composition-based stats.
Identities = 22/234 (9%), Positives = 52/234 (22%), Gaps = 20/234 (8%)
Query: 33 CFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV 92
L + + +Y + F A + F + +
Sbjct: 436 IGLFSQSSEMFEKALKINEDKSLEAYSLYWLGRSEYERNQFDNALDIFKKFQKHSE---- 491
Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
L + A Y + + + D +
Sbjct: 492 RNSVLSNTRLSYDIAYIYFKLGEYAFALKFFKEFNAVNSSFNQSYQRDTFLRMGDCEFAL 551
Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
+ +++ + + + Q A + G Y + I
Sbjct: 552 KQYWSAMEFYNTAIALNSE----------------QGAYAMYQKGISYGFVDRNLKKIET 595
Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
+ Y ++A+ L +Y + +A E L+ Y +
Sbjct: 596 LLQLTQTYLKDPLLDDALFELASSYSRESNTIKAIETYDLLLSNYKNSPYTPRA 649
>gi|255280318|ref|ZP_05344873.1| putative tetratricopeptide repeat-containing domain protein
[Bryantella formatexigens DSM 14469]
gi|255269409|gb|EET62614.1| putative tetratricopeptide repeat-containing domain protein
[Bryantella formatexigens DSM 14469]
Length = 318
Score = 43.2 bits (99), Expect = 0.040, Method: Composition-based stats.
Identities = 34/228 (14%), Positives = 60/228 (26%), Gaps = 1/228 (0%)
Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR-KSLLMSAF 102
+D + Y + FLK A F+ S P
Sbjct: 88 KDTCSRILELAENVDAYYMRGAAFLKLGEAELAKADFDAASLLAPEDYGLFLDIYKQYEE 147
Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
SA + + + +Y+ +G + K + M
Sbjct: 148 QNQSAVGDEYLQKALNIPGEEMEDYYQKGSIYFYLGEYTKAQEMLAKPAEAKHKEAMMLM 207
Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
+ +S + + + A I L G Y AAI + LA +D
Sbjct: 208 GEVYLALGDSVHARNVYQQYMEEYGEAAEAYNGIVLCELADGNYDAAISSAETGLALEAD 267
Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
+ + + AY A+ V + E YP + +
Sbjct: 268 ESTKRDLLYNEIVAYERKGDFATAKTVAAQFAELYPDDEEGKKEYDFL 315
Score = 36.3 bits (81), Expect = 4.3, Method: Composition-based stats.
Identities = 31/239 (12%), Positives = 65/239 (27%), Gaps = 13/239 (5%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
+F L G + +V L ++ + ++++ ++ A F
Sbjct: 4 RFYKLAAVLSMCMLLAGCRDKGPSEVELAR-----------DEGISYMEQADYQNAITAF 52
Query: 81 NQCSRDFPF-AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
+ + + + I + E+ + Y+ +
Sbjct: 53 ENAYSLCDEKMPETKTDISLYEAACQFKMGDFEGVKDTCSRILELAENVDAYYMRGAAFL 112
Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
+ A+ L + ++ Y + + L E+ Y
Sbjct: 113 KLGEAELAKADFDAASLLAPEDYGLFLDIYKQYEEQNQSAVGDEYLQKALNIPGEEMEDY 172
Query: 200 YLKRGEYVAAIPRFQ-LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
Y K Y + + +EAM + E Y+AL AR V E Y
Sbjct: 173 YQKGSIYFYLGEYTKAQEMLAKPAEAKHKEAMMLMGEVYLALGDSVHARNVYQQYMEEY 231
>gi|149277134|ref|ZP_01883276.1| hypothetical protein PBAL39_09601 [Pedobacter sp. BAL39]
gi|149232011|gb|EDM37388.1| hypothetical protein PBAL39_09601 [Pedobacter sp. BAL39]
Length = 580
Score = 43.2 bits (99), Expect = 0.040, Method: Composition-based stats.
Identities = 27/211 (12%), Positives = 68/211 (32%), Gaps = 3/211 (1%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
E +++ Q +A + Q F + ++ SA + + G + A S +
Sbjct: 363 ELGNIYILTQQPWEAVLIYEQVVHQFEGQPLGNEARYRSAKLSFYQGNFNYAKSQADVLK 422
Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
+ D + + +S + M + + +
Sbjct: 423 ASTSQLIANDALNLSLLISDNLQSELDSNALKMYADA--EMLEFRNQPAKALAKLDSIPL 480
Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE-AYVAL 240
V + L + R Y+K +++AA + ++ S + ++A+ L + L
Sbjct: 481 VFPNNSLLDDILMAKSRIYIKGKDFIAASAALKALIEKQSSSIWTDDALFNLADLCEQKL 540
Query: 241 ALMDEAREVVSLIQERYPQGYWARYVETLVK 271
++A+ + + YP + +
Sbjct: 541 GDNEQAKTLYQKLITDYPGSMYTAEARKRFR 571
>gi|327193464|gb|EGE60360.1| hypothetical protein RHECNPAF_157007 [Rhizobium etli CNPAF512]
Length = 329
Score = 43.2 bits (99), Expect = 0.041, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 33/79 (41%), Gaps = 2/79 (2%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ + ++ G+Y A F +A+Y + A +A L EA + +EA +
Sbjct: 208 QYKAAYGHVLSGDYGTAEQEFNQYIAHYPSSARAADANFWLGEALYSQGKYNEAAKTFLN 267
Query: 253 IQERYPQGYWARYVETLVK 271
++Y + E L+K
Sbjct: 268 AHQKYGSSE--KAPEMLLK 284
Score = 37.9 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 30/78 (38%)
Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
+ A +G +G+Y A F Y +E A E + +L + AL
Sbjct: 234 HYPSSARAADANFWLGEALYSQGKYNEAAKTFLNAHQKYGSSEKAPEMLLKLGMSLAALD 293
Query: 242 LMDEAREVVSLIQERYPQ 259
+ A + + +RYP+
Sbjct: 294 NKETACATLREVSKRYPK 311
>gi|256830988|ref|YP_003159716.1| hypothetical protein Dbac_3225 [Desulfomicrobium baculatum DSM
4028]
gi|256580164|gb|ACU91300.1| Tetratricopeptide domain protein [Desulfomicrobium baculatum DSM
4028]
Length = 1031
Score = 43.2 bits (99), Expect = 0.041, Method: Composition-based stats.
Identities = 31/202 (15%), Positives = 61/202 (30%), Gaps = 15/202 (7%)
Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
E+Y+ A L ++ A Q + LL +
Sbjct: 388 EELYKTAQSALIVEDLKTARAAVTQMIEHPKLPEPLYEELLYTLADITMKEGLLDLEGNF 447
Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
+ E+ + + + Y + +Y +
Sbjct: 448 ASILEA-YEAAKNSNLDSRNVPEALSRMGYLHLFVGNVPEAKGYFDLLRRKYPDD----- 501
Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
++A + G +YL+ +Y A FQ + N+ + + + L+ A+
Sbjct: 502 ---------RRVAMIDYYWGEHYLRLKDYGRAAEHFQYAIQNFPMSLAVQPSTVGLLRAF 552
Query: 238 VALALMDEAREVVSLIQERYPQ 259
L D+A VVS I+ R+P
Sbjct: 553 TGLGYFDKALGVVSSIERRWPS 574
>gi|225849933|ref|YP_002730167.1| Tetratricopeptide repeat family protein [Persephonella marina
EX-H1]
gi|225645117|gb|ACO03303.1| Tetratricopeptide repeat family protein [Persephonella marina
EX-H1]
Length = 228
Score = 43.2 bits (99), Expect = 0.041, Method: Composition-based stats.
Identities = 25/251 (9%), Positives = 67/251 (26%), Gaps = 26/251 (10%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
+ + G ++ ++ + ++ + + +K +
Sbjct: 1 MKRIIYILPASFILFAGCVKKEDINLLQREIISLKKEVAQIREGQEEIKGSLNDLSKRVD 60
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
N + + ++ + + E + + V
Sbjct: 61 NVSQIASKNS-----------------LEIEKIKLAQKPETVETIEKEGAEKVRIPDNPK 103
Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
Y + T+ +Y VE Y S A F++ E I +
Sbjct: 104 ELYKYALNAYYKGKTEEARKYFQIFVEEYPGSDMYDNALFWIGQTYYTEGDYEKAIEAFD 163
Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
+ + AM + +Y+ L ++EA++++ I R+P
Sbjct: 164 RLINDCETGKA---------QECNKYPVAMLKKAYSYIKLGEIEEAKKLLKEIVRRFPDT 214
Query: 261 YWARYVETLVK 271
+ ++
Sbjct: 215 EESELASRKLE 225
>gi|218516472|ref|ZP_03513312.1| hypothetical protein Retl8_23901 [Rhizobium etli 8C-3]
Length = 309
Score = 43.2 bits (99), Expect = 0.041, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 33/79 (41%), Gaps = 2/79 (2%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ + ++ G+Y A F +A+Y + A +A L EA + +EA +
Sbjct: 208 QYKAAYGHVLSGDYGTAEQEFNQYIAHYPSSARAADANFWLGEALYSQGKYNEAAKTFLN 267
Query: 253 IQERYPQGYWARYVETLVK 271
++Y + E L+K
Sbjct: 268 AHQKYGSSE--KAPEMLLK 284
>gi|190893273|ref|YP_001979815.1| hypothetical protein RHECIAT_CH0003699 [Rhizobium etli CIAT 652]
gi|190698552|gb|ACE92637.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
Length = 329
Score = 43.2 bits (99), Expect = 0.041, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 33/79 (41%), Gaps = 2/79 (2%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ + ++ G+Y A F +A+Y + A +A L EA + +EA +
Sbjct: 208 QYKAAYGHVLSGDYGTAEQEFNQYIAHYPSSARAADANFWLGEALYSQGKYNEAAKTFLN 267
Query: 253 IQERYPQGYWARYVETLVK 271
++Y + E L+K
Sbjct: 268 AHQKYGSSE--KAPEMLLK 284
Score = 37.9 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 30/78 (38%)
Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
+ A +G +G+Y A F Y +E A E + +L + AL
Sbjct: 234 HYPSSARAADANFWLGEALYSQGKYNEAAKTFLNAHQKYGSSEKAPEMLLKLGMSLAALD 293
Query: 242 LMDEAREVVSLIQERYPQ 259
+ A + + +RYP+
Sbjct: 294 NKETACATLREVSKRYPK 311
>gi|167837696|ref|ZP_02464579.1| hypothetical protein Bpse38_14500 [Burkholderia thailandensis
MSMB43]
Length = 249
Score = 43.2 bits (99), Expect = 0.041, Method: Composition-based stats.
Identities = 19/111 (17%), Positives = 31/111 (27%)
Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
+ +Y + + R K V + G + A F+
Sbjct: 94 RQQKEYYTDLDARLKKFEPQKTTVDGVEGTVQPGETDAFNAASQQFRNGNFKGAAASFRA 153
Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
+A Y + + A L A AL + I + YPQ A
Sbjct: 154 FIAKYPQSPYQPTAQYWLGNAQYALRDYKGSTATWQGIVKNYPQHPRAADA 204
Score = 42.5 bits (97), Expect = 0.072, Method: Composition-based stats.
Identities = 16/123 (13%), Positives = 39/123 (31%), Gaps = 14/123 (11%)
Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
+ K + +Y SPY A++++ G +Y
Sbjct: 137 QQFRNGNFKGAAASFRAFIAKYPQSPYQPTAQYWL--------------GNAQYALRDYK 182
Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
+ +Q ++ NY A +A+ + A++ + ++P A +
Sbjct: 183 GSTATWQGIVKNYPQHPRAADALIAIGTNQFEQGQKAAAKKTFEQVVSQFPGSNAAETAQ 242
Query: 268 TLV 270
+ +
Sbjct: 243 SKL 245
>gi|332020497|gb|EGI60912.1| Intraflagellar transport protein 88-like protein [Acromyrmex
echinatior]
Length = 801
Score = 43.2 bits (99), Expect = 0.041, Method: Composition-based stats.
Identities = 27/225 (12%), Positives = 54/225 (24%), Gaps = 15/225 (6%)
Query: 35 LVGWERQSSRDVYLDS------VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
L + TD + + +Y +++ KE + +A E F +
Sbjct: 480 LSACAIKKDELNVARELLLCALETDASHVQALYNLGLVYKKENMYEEALECFWKIRNIVR 539
Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
+ + I + Q
Sbjct: 540 HDPQT-LYQIGHLYQLMRDIDQASEWYNQLLGIISSDPGVLQKLGELYDSIGDKQQAFQY 598
Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI----GRYYLKRG 204
D + + Y S + +LA E + G
Sbjct: 599 YNDSHRFYPANFEVIDWIGSYFISMQIAEKALTYFEKAVELAPDEPRWRLLVAACLRRTG 658
Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
++ A+ +Q + + D E + L+ L L EA+
Sbjct: 659 QFHKALTEYQDIHNKFPDNI---ECLKFLIRLCSDLGLK-EAQMY 699
>gi|270159823|ref|ZP_06188479.1| tetratricopeptide repeat protein [Legionella longbeachae D-4968]
gi|289165419|ref|YP_003455557.1| hypothetical protein LLO_2086 [Legionella longbeachae NSW150]
gi|269988162|gb|EEZ94417.1| tetratricopeptide repeat protein [Legionella longbeachae D-4968]
gi|288858592|emb|CBJ12473.1| putative conserved hypothetical protein [Legionella longbeachae
NSW150]
Length = 318
Score = 43.2 bits (99), Expect = 0.041, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 41/105 (39%)
Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
+RY ++ A + +G YL + +Y +I F VL + + +
Sbjct: 212 KRYDDAITAMNVFVQKYPKGGYTANAQYWLGELYLVKKDYSKSIEHFNTVLQQFPTSSKS 271
Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+M ++ AY EA++ + + YP A+ + ++
Sbjct: 272 AASMLKVGYAYAEQGNKQEAKKFLQQVVRAYPNTPTAQLASSKLR 316
>gi|240128293|ref|ZP_04740954.1| hypothetical protein NgonS_06586 [Neisseria gonorrhoeae SK-93-1035]
gi|268686690|ref|ZP_06153552.1| periplasmic protein [Neisseria gonorrhoeae SK-93-1035]
gi|268626974|gb|EEZ59374.1| periplasmic protein [Neisseria gonorrhoeae SK-93-1035]
Length = 237
Score = 43.2 bits (99), Expect = 0.041, Method: Composition-based stats.
Identities = 12/60 (20%), Positives = 21/60 (35%)
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
+ G + I + D+ A E + ++ E L D AR + + YP
Sbjct: 166 RMGNCESVIEIGGRYANRFKDSPTAPEVVFKIGECQYRLQQKDIARATWRSLIQTYPGSP 225
>gi|222149665|ref|YP_002550622.1| tol-pal system protein YbgF [Agrobacterium vitis S4]
gi|221736647|gb|ACM37610.1| tol-pal system protein YbgF [Agrobacterium vitis S4]
Length = 333
Score = 43.2 bits (99), Expect = 0.041, Method: Composition-based stats.
Identities = 20/117 (17%), Positives = 33/117 (28%), Gaps = 14/117 (11%)
Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
I K + RY S A F++ + A +
Sbjct: 213 YQIAYSHVLSGDYKAAEGEFRDFISRYPKSGKAADANFWLGEAQYSQARYK--------- 263
Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
+ F +Y A E + +L + AL D A + + +RYP
Sbjct: 264 -----DSAETFLKAYQSYGKTPKAPEMLLKLGMSLAALDNKDTACATLREVNKRYPD 315
>gi|162451930|ref|YP_001614297.1| hypothetical protein sce3657 [Sorangium cellulosum 'So ce 56']
gi|161162512|emb|CAN93817.1| hypothetical protein sce3657 [Sorangium cellulosum 'So ce 56']
Length = 423
Score = 43.2 bits (99), Expect = 0.041, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 32/74 (43%)
Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
+ +R Y A F + L A+EA+ R++E ++ EARE RY
Sbjct: 348 MAFDQRRSYAEAERWFLVYLEEQPGGAFAQEALGRVIECRESMGPASEAREAARRYLARY 407
Query: 258 PQGYWARYVETLVK 271
P G A + L++
Sbjct: 408 PAGPHAAHARDLLE 421
>gi|254443494|ref|ZP_05056970.1| tetratricopeptide repeat domain protein [Verrucomicrobiae bacterium
DG1235]
gi|198257802|gb|EDY82110.1| tetratricopeptide repeat domain protein [Verrucomicrobiae bacterium
DG1235]
Length = 413
Score = 43.2 bits (99), Expect = 0.041, Method: Composition-based stats.
Identities = 40/228 (17%), Positives = 78/228 (34%), Gaps = 13/228 (5%)
Query: 43 SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102
LD + YE A+ K + A YF+ L
Sbjct: 49 EPKKTLDPELASEQVMQYYEAAITEWKGGDVEFAERYFSAALGVPTEVPEKEMVLSKMGE 108
Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
+ +G + +AA++ E T++P+S+ + VY +G Y +M A +L +
Sbjct: 109 LYNKSGMFPKAAAIYERLATEFPDSRRLPEVYMAIGNIYRKM--------GAQELAISRY 160
Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
++ N + + ++ +LA I + +R EY + +Q +
Sbjct: 161 YMVLNSSLNVSFDQLEKYRQLSLDAKLA-----IAETHKEREEYQESYRLYQALFRLELR 215
Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
R+ LA +A + L + YP+ + L+
Sbjct: 216 PVERLRVHYRMCYLLYELANYQQAVSQLKLFLDEYPESPHNPELRYLL 263
>gi|194366889|ref|YP_002029499.1| tol-pal system protein YbgF [Stenotrophomonas maltophilia R551-3]
gi|194349693|gb|ACF52816.1| tol-pal system protein YbgF [Stenotrophomonas maltophilia R551-3]
Length = 272
Score = 43.2 bits (99), Expect = 0.042, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 34/78 (43%)
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+G Y + A +F+ +L+ Y + A + ++ + +D+A++ + +
Sbjct: 186 YWLGESYYATRNFPMAETQFRELLSRYPTHDKAAGGLLKVGLSQYGEGKVDQAQQTLETV 245
Query: 254 QERYPQGYWARYVETLVK 271
+YP AR + ++
Sbjct: 246 VAQYPGSDAARTAQDRLQ 263
Score = 42.5 bits (97), Expect = 0.071, Method: Composition-based stats.
Identities = 18/70 (25%), Positives = 27/70 (38%), Gaps = 2/70 (2%)
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
K G+Y + F L Y + +A A+ L E+Y A A + RYP
Sbjct: 157 KAGKYDDSAQLFLSFLQLYPNGVYAPNALYWLGESYYATRNFPMAETQFRELLSRYPTHD 216
Query: 262 WARYVETLVK 271
+ L+K
Sbjct: 217 --KAAGGLLK 224
>gi|260779146|ref|ZP_05888038.1| TPR repeat-containing protein [Vibrio coralliilyticus ATCC BAA-450]
gi|260605310|gb|EEX31605.1| TPR repeat-containing protein [Vibrio coralliilyticus ATCC BAA-450]
Length = 258
Score = 43.2 bits (99), Expect = 0.042, Method: Composition-based stats.
Identities = 11/93 (11%), Positives = 29/93 (31%)
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
+F + A + + + +Y D+ +A+ +L +
Sbjct: 166 QFQKDFPDSTFAPNAHYWLGQLYFAKKQDKEAVKSFASVVSYKDSNKRADALVKLGDLSQ 225
Query: 239 ALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+A++ + + YP A+ +K
Sbjct: 226 RNNNAAQAKKYYQQVLDEYPDSASAKLAAERIK 258
Score = 40.2 bits (91), Expect = 0.36, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 30/79 (37%), Gaps = 3/79 (3%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
LK+ +Y AI FQ ++ D+ A A L + Y A EA + +
Sbjct: 144 YQNAVDLILKKRDYTGAIAAFQQFQKDFPDSTFAPNAHYWLGQLYFAKKQDKEAVKSFAS 203
Query: 253 IQERYPQGYWARYVETLVK 271
+ Y + + LVK
Sbjct: 204 VVS-YKDSN--KRADALVK 219
>gi|297171139|gb|ADI22150.1| uncharacterized protein conserved in bacteria [uncultured
myxobacterium HF0200_19H16]
Length = 283
Score = 43.2 bits (99), Expect = 0.042, Method: Composition-based stats.
Identities = 18/119 (15%), Positives = 39/119 (32%), Gaps = 5/119 (4%)
Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGR-----NQLAAKEVEIGRYYLKRGEYVAAIPR 212
++ + Y Y F+ R ++ A +G + Y +I
Sbjct: 158 ASLLFTQALGAYQKGKYNDAILFFDEFIRAFEESSKYADALYWLGECEFAKENYGNSIAA 217
Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
++ L + + + +L +Y L +EA + R+P A + +K
Sbjct: 218 YKRYLKLEPKGDKGADVLLKLGLSYERLHAFNEAAVFFKKLLLRFPGSALADLAKAHLK 276
>gi|283850790|ref|ZP_06368076.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio sp. FW1012B]
gi|283573713|gb|EFC21687.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio sp. FW1012B]
Length = 999
Score = 43.2 bits (99), Expect = 0.042, Method: Composition-based stats.
Identities = 34/209 (16%), Positives = 65/209 (31%), Gaps = 17/209 (8%)
Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
A NF A A R+ +L S + A+ +E
Sbjct: 357 AAQAEKLAGNFGAARTMMTDLKNKKDLAKDLREEVLHSLAGVLVDMYKDEPAAHYDEIQG 416
Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
E+ N D Y V + + Y + + ++Y
Sbjct: 417 ALQEAINTDTNSYRVPEALLHLGMLNLRVGNLP-EAKGYFNVLTKKYP------------ 463
Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242
+ G YY RG+Y A +Q ++ + ++++ E L + V L
Sbjct: 464 --ADANVPLINFYWGEYYFDRGDYKKAAEEYQGLIEKFPESKYVREGAMGLAKTLVKLGR 521
Query: 243 MDEAREVVSLIQERYPQGYWARYVETLVK 271
EA ++ I +R+P + +++
Sbjct: 522 YKEAAQIADYIGKRWP--RYYVEFPGILR 548
Score = 41.3 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 28/235 (11%), Positives = 67/235 (28%), Gaps = 29/235 (12%)
Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
+ ++ KA E + FP + R+ + A G+Y++AA + + +
Sbjct: 476 GEYYFDRGDYKKAAEEYQGLIEKFPESKYVREGAMGLAKTLVKLGRYKEAAQIADYIGKR 535
Query: 124 YPESKN-------------VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
+P ++ + L+L + I +
Sbjct: 536 WPRYYVEFPGILRIDGDIAYRNGDVKKARDDYLTFYNMTPKVKDADLVLARLGDIYAKLG 595
Query: 171 NSPYVKGARFYVTVGRNQLA----------------AKEVEIGRYYLKRGEYVAAIPRFQ 214
N P + + +Y + ++
Sbjct: 596 NRPAAVDFYNMAVKDYPNEEGGLISKMRLAEQGVHDQPTISEMFSLFDKPQYGSPDDIYE 655
Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
++ ++ ++ A A +L + E+ + + ERYP+ A E +
Sbjct: 656 GIIRDHPNSPLAPLAQIKLAMWQLYRQNYPESLKSAARFLERYPKNELAPKAEEV 710
Score = 39.4 bits (89), Expect = 0.52, Method: Composition-based stats.
Identities = 34/218 (15%), Positives = 67/218 (30%), Gaps = 21/218 (9%)
Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
++ R + +L L+ N +A YFN ++ +P
Sbjct: 419 QEAINTDTNSYRVPEALLHLGMLNLRVGNLPEAKGYFNVLTKKYPADANVPLINFYWGEY 478
Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
+ G Y++AA + I ++PESK V + + ++ R Q A + ++
Sbjct: 479 YFDRGDYKKAAEEYQGLIEKFPESKYVREGAMGLAKTLVKLGRYKEAAQIADYIGKRWPR 538
Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
VE + + A +
Sbjct: 539 YYVEFPGILRIDGDIAYRNGDVK---------------------KARDDYLTFYNMTPKV 577
Query: 224 EHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
+ A+ +ARL + Y L A + ++ + YP
Sbjct: 578 KDADLVLARLGDIYAKLGNRPAAVDFYNMAVKDYPNEE 615
>gi|296133328|ref|YP_003640575.1| hypothetical protein TherJR_1825 [Thermincola sp. JR]
gi|296031906|gb|ADG82674.1| hypothetical protein TherJR_1825 [Thermincola potens JR]
Length = 269
Score = 43.2 bits (99), Expect = 0.043, Method: Composition-based stats.
Identities = 9/80 (11%), Positives = 25/80 (31%), Gaps = 9/80 (11%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSV---------TDVRYQREVYEKAVLFLK 69
+ + + F ++ FL G + + + Y + +
Sbjct: 1 MMRRVAVLLFISSILFLSGCSNNKPPENSFVTNLPREETGSRNKPAVSDDAYANGLRAMV 60
Query: 70 EQNFSKAYEYFNQCSRDFPF 89
+++ KA E+F + +
Sbjct: 61 HKDYYKAIEFFEKVVPEDKN 80
>gi|237746663|ref|ZP_04577143.1| tol-Pal cell envelope complex subunit YbgF [Oxalobacter formigenes
HOxBLS]
gi|229378014|gb|EEO28105.1| tol-Pal cell envelope complex subunit YbgF [Oxalobacter formigenes
HOxBLS]
Length = 245
Score = 42.9 bits (98), Expect = 0.043, Method: Composition-based stats.
Identities = 17/95 (17%), Positives = 34/95 (35%), Gaps = 1/95 (1%)
Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ-LVLANYSDAEHAEEAMARLVE 235
+ F ++ LAAK + + Q V+ Y EAM +
Sbjct: 147 YSDFLKRFPKSHLAAKAQYQLGNAYYMQGDYKSALKNQSAVVRRYPKNPITPEAMLNMAS 206
Query: 236 AYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
+ L + A++ +S + +YP A+ + +
Sbjct: 207 CQIGLKDLASAKKTLSELVRKYPASEAAKGAKERL 241
Score = 38.6 bits (87), Expect = 0.96, Method: Composition-based stats.
Identities = 15/108 (13%), Positives = 29/108 (26%)
Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
+ + R + V + +Y A+ + L
Sbjct: 93 KDFYLDLDTRLKRLEPQQMTVNGKEVTVEADEGQSYSRAEELFAAADYKGAVSAYSDFLK 152
Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
+ + A +A +L AY A + S + RYP+
Sbjct: 153 RFPKSHLAAKAQYQLGNAYYMQGDYKSALKNQSAVVRRYPKNPITPEA 200
>gi|225873133|ref|YP_002754592.1| tetratricopeptide repeat protein [Acidobacterium capsulatum ATCC
51196]
gi|225791697|gb|ACO31787.1| tetratricopeptide repeat protein [Acidobacterium capsulatum ATCC
51196]
Length = 744
Score = 42.9 bits (98), Expect = 0.043, Method: Composition-based stats.
Identities = 18/188 (9%), Positives = 41/188 (21%), Gaps = 3/188 (1%)
Query: 72 NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
N+ E + +L + + GE + +
Sbjct: 475 NYRHFREVYINHVLGQQHPAYPVVTLASCTRTLVLGENHPVTSRPGENPDWMRWNNLGIA 534
Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
Y+ L + + V + ++ + + + + A
Sbjct: 535 YLSELQYAAAVKAFDHVVQLRPDYADAYTNIAVVEIPWEKYGSAMDSIRRALMLSPHDAR 594
Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
+ G + Y + L AY L A E
Sbjct: 595 AHYYAALLERRAGHPQQEVADLLEAEKQYPQSRDVRR---ELGVAYYRLGEDKLAIEQFE 651
Query: 252 LIQERYPQ 259
+++ P
Sbjct: 652 ALEKIDPD 659
>gi|254522781|ref|ZP_05134836.1| putative secreted protein [Stenotrophomonas sp. SKA14]
gi|219720372|gb|EED38897.1| putative secreted protein [Stenotrophomonas sp. SKA14]
Length = 272
Score = 42.9 bits (98), Expect = 0.043, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 34/78 (43%)
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+G Y + A +F+ +L+ Y + A + ++ + +D+A++ + +
Sbjct: 186 YWLGESYYATRNFPMAETQFRELLSRYPTHDKAAGGLLKVGLSQYGEGKVDQAQQTLETV 245
Query: 254 QERYPQGYWARYVETLVK 271
+YP AR + ++
Sbjct: 246 VAQYPGSDAARTAQDRLQ 263
Score = 42.9 bits (98), Expect = 0.055, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 29/78 (37%), Gaps = 2/78 (2%)
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+ LK G+Y + F L Y + +A A+ L E+Y A A +
Sbjct: 149 YNVAFESLKAGKYDDSAQLFLSFLQLYPNGVYAPNALYWLGESYYATRNFPMAETQFREL 208
Query: 254 QERYPQGYWARYVETLVK 271
RYP + L+K
Sbjct: 209 LSRYPTHD--KAAGGLLK 224
>gi|289207527|ref|YP_003459593.1| hypothetical protein TK90_0342 [Thioalkalivibrio sp. K90mix]
gi|288943158|gb|ADC70857.1| Tetratricopeptide TPR_2 repeat protein [Thioalkalivibrio sp.
K90mix]
Length = 582
Score = 42.9 bits (98), Expect = 0.043, Method: Composition-based stats.
Identities = 25/259 (9%), Positives = 67/259 (25%), Gaps = 14/259 (5%)
Query: 26 IFFSIAVCFLVGWER-----------QSSRDVYLDSVTDVRYQREVYEK---AVLFLKEQ 71
+F ++A LVG ++ R V L + + + + ++
Sbjct: 15 LFVALAALVLVGCAHMPLGASEGEALETDRPVILPIMPAQDPEAALMLGVLVGEIAVRSG 74
Query: 72 NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
+ +A Y+ + +A ++ ++ F + Q + + +
Sbjct: 75 QYEEAARYYGAAALLSDDPAIAERATRIALFARDRNQALQSSERWRQLAPESLDALQLST 134
Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
+ +G + + + + + A + +Q
Sbjct: 135 VLRLDLGQPDPAAEQMGTVIDLQAVQGGDPYAALGAVVGQTHNREAALEALEKLTDQRQD 194
Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
+ + P + + A DEA E +
Sbjct: 195 DVGVHRVFAEAALRFAPGDPALEATARGVERFPESVSLRLLRARALDEAGQSDEALEELR 254
Query: 252 LIQERYPQGYWARYVETLV 270
+P+ AR+ +
Sbjct: 255 ATVANHPESREARFGYARM 273
>gi|120554617|ref|YP_958968.1| tetratricopeptide domain-containing protein [Marinobacter aquaeolei
VT8]
gi|120324466|gb|ABM18781.1| Tetratricopeptide domain protein [Marinobacter aquaeolei VT8]
Length = 258
Score = 42.9 bits (98), Expect = 0.044, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 33/78 (42%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+G YL + + A F +V YSD A +A+ +L L EAR ++
Sbjct: 176 YYWLGEVYLAKPQLEQARQAFTIVATRYSDHRKAPDAVYKLGVTLDRLGEKGEARRRMTS 235
Query: 253 IQERYPQGYWARYVETLV 270
+ E+YP A + +
Sbjct: 236 VVEQYPDSGAAELAKKYL 253
Score = 36.3 bits (81), Expect = 4.8, Method: Composition-based stats.
Identities = 17/89 (19%), Positives = 32/89 (35%), Gaps = 1/89 (1%)
Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
+ +I + +Y AI R + Y + + A L E Y+A
Sbjct: 128 YRSPEPEEQKTYNDIIDLIRNKKDYDTAITRLYEFVDTYPEGDLTVNAYYWLGEVYLAKP 187
Query: 242 LMDEAREVVSLIQERYPQGYWARYV-ETL 269
+++AR+ +++ RY A L
Sbjct: 188 QLEQARQAFTIVATRYSDHRKAPDAVYKL 216
>gi|294101375|ref|YP_003553233.1| Lytic transglycosylase catalytic [Aminobacterium colombiense DSM
12261]
gi|293616355|gb|ADE56509.1| Lytic transglycosylase catalytic [Aminobacterium colombiense DSM
12261]
Length = 655
Score = 42.9 bits (98), Expect = 0.044, Method: Composition-based stats.
Identities = 21/205 (10%), Positives = 49/205 (23%), Gaps = 7/205 (3%)
Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL-----GE 118
++KA F + D +R +S + + +
Sbjct: 217 GYAAYLRGEYAKAIPLFLEVPLDSADGLKSRYYRAVSLYRLERYEEALKLWEWLALNGKS 276
Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
+ + + + L + +V K
Sbjct: 277 YGESSVRRLGILAGQGEREKTLESLQRIADRGNSTVRPRALYSLYTLVPEEQKEFLKKEL 336
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
+ A + K+G A+ ++ + S+ E + Y
Sbjct: 337 IDKYAMTEGTQAI-LWDDAWQAWKKGNTREALRIWEHFFSL-SNGAMRERLLYWTARGYE 394
Query: 239 ALALMDEAREVVSLIQERYPQGYWA 263
L +A E+ + YP ++
Sbjct: 395 KLEQKGKAEELFHTLISDYPLSIYS 419
>gi|332704037|ref|ZP_08424125.1| tol-pal system protein YbgF [Desulfovibrio africanus str. Walvis
Bay]
gi|332554186|gb|EGJ51230.1| tol-pal system protein YbgF [Desulfovibrio africanus str. Walvis
Bay]
Length = 289
Score = 42.9 bits (98), Expect = 0.045, Method: Composition-based stats.
Identities = 14/116 (12%), Positives = 37/116 (31%), Gaps = 5/116 (4%)
Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP-----R 212
R ++ + Y+ + + + V ++ Y
Sbjct: 172 AQALYLRALDNFKKRNYMNAQSMWAEFVKAYPKHELVSNAIFWQGESFYQTGDFARAVLS 231
Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
+Q V+ Y + AM + A+ + V+ + ++YP+ A+ ++
Sbjct: 232 YQDVITKYPKSNKIPAAMLKQGIAFKKIGKDKAGDLVLQELVKKYPKSAEAKRAKS 287
>gi|229496796|ref|ZP_04390507.1| TPR domain protein [Porphyromonas endodontalis ATCC 35406]
gi|229316342|gb|EEN82264.1| TPR domain protein [Porphyromonas endodontalis ATCC 35406]
Length = 663
Score = 42.9 bits (98), Expect = 0.045, Method: Composition-based stats.
Identities = 26/208 (12%), Positives = 68/208 (32%), Gaps = 7/208 (3%)
Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQC--SRDFPFAGVARKSLLMSAFVQYSAGKY 110
+ + +Y+ A++ L + + +A F Q ++ + AR+ LL + +
Sbjct: 452 EESHAYSLYQSALMLLNKGDLHQAITLFGQALNEKNIFDSPQARRLLLHKLYQVEGVIEQ 511
Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
Q+ + + E ++Y+ + L L +
Sbjct: 512 QKKKTKETKKDKAQLEKLALEYIEMGDQCLDEYDDPTSALNNYDKALALNPLHPTALARK 571
Query: 171 NSP-----YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
+K A + G +L ++ E A ++++ + +
Sbjct: 572 GFALRSLGRIKEAHKLLKEGYEKLFRHLEVAMQFAFTNLEMGADKEAYKIMSRSVVEHPG 631
Query: 226 AEEAMARLVEAYVALALMDEAREVVSLI 253
+ + +L+E L +EA +++
Sbjct: 632 NKPLLTKLIEVSEQLGYSEEAHRYQTML 659
>gi|309791248|ref|ZP_07685779.1| TPR repeat-containing protein [Oscillochloris trichoides DG6]
gi|308226674|gb|EFO80371.1| TPR repeat-containing protein [Oscillochloris trichoides DG6]
Length = 1126
Score = 42.9 bits (98), Expect = 0.045, Method: Composition-based stats.
Identities = 34/229 (14%), Positives = 61/229 (26%), Gaps = 6/229 (2%)
Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
+ + + + A L+ +A + Q P A L + Q
Sbjct: 897 ETATNLPGGTQDANVQFWLAEGLLRSGALDRAMNAYQQALAIRPTFPEALLGLAQLQYAQ 956
Query: 105 YSAGKYQQAASLGEEYITQYPESK-NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
Q Y E+ + G ++ + ++++ Y
Sbjct: 957 GDPATALQTVEQSIGQRGDYAEALLFKGKLLQEYGRIDQALVAYDASIRASSQIAETYYR 1016
Query: 164 RIVERYTNSPYVK--GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
R + + Y K + +GR Y R + A F+ +
Sbjct: 1017 RSLLLISTERYDKAINDLRRAVTLQPNFPEAHYWMGRAYYARNQDDQAHDAFKRAVDLNP 1076
Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
EA+ L A L DEA V + G WA +
Sbjct: 1077 SYT---EALYYLGLAAEDLDRRDEAIGVYQTVILADGTGEWATRARDQL 1122
>gi|268316553|ref|YP_003290272.1| Tetratricopeptide TPR_2 repeat-containing protein [Rhodothermus
marinus DSM 4252]
gi|262334087|gb|ACY47884.1| Tetratricopeptide TPR_2 repeat protein [Rhodothermus marinus DSM
4252]
Length = 410
Score = 42.9 bits (98), Expect = 0.045, Method: Composition-based stats.
Identities = 41/260 (15%), Positives = 71/260 (27%), Gaps = 18/260 (6%)
Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
L I + + G + + + + Y R + + ++AYE +
Sbjct: 15 LLAIGLFLVLAGPGGCSSDPNIEGAKLDLRNKDYARALENVEKALQRNPQNAEAYELKGR 74
Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
D V+ +Q+A L + YV A
Sbjct: 75 IILDILANQQNLDPEARQDTVRAMVAAFQKAVELDPKLQENVLNQLRFAYVREFQNGVNA 134
Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA------------ 190
+ I++ + YV A + GR A
Sbjct: 135 FNRGREDATYYLHAASYFENATIIQPDSAGAYVNEAFSLLNAGRQAEAIPPLETAIAKGE 194
Query: 191 ---AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
+ + Y + + A+ + Y D E ++L+ AYV +DEA
Sbjct: 195 NSKDTYLILADLYRLQQQPEKALEVLEKARELYPDDP---EVQSQLLNAYVQAGKVDEAM 251
Query: 248 EVVSLIQERYPQGYWARYVE 267
V ER P RY
Sbjct: 252 NVYKEAVEREPDNKLYRYNY 271
>gi|187251683|ref|YP_001876165.1| putative tol-pal system protein [Elusimicrobium minutum Pei191]
gi|186971843|gb|ACC98828.1| Putative Tol-Pal system protein [Elusimicrobium minutum Pei191]
Length = 229
Score = 42.9 bits (98), Expect = 0.045, Method: Composition-based stats.
Identities = 26/252 (10%), Positives = 67/252 (26%), Gaps = 27/252 (10%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ T F F +G L +A+ ++ +
Sbjct: 1 MKNLTKTFFILALGFFFMGCLASDKDMSALKEQMVEL------NRALATMQANQADLGAK 54
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+ + + T + + ++
Sbjct: 55 M-------DELSSDISVNNENLQETNLQLTRLSSKLDDLSIATTAVAQMQAEASAKAVIL 107
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
+ V D + ++ +E++ V+ A IG
Sbjct: 108 PTTVFETAKVNLDDKKYDSAIEGFKLYIEKFPEGELVQEAYNL--------------IGD 153
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
Y + EY +A + ++ Y ++ + ++ + L EA++ + I + YP
Sbjct: 154 AYFAKKEYKSAAIEYANLIKKYPKSKKTPSYRLKYAKSIIPLNKKTEAKQYLQSIIQDYP 213
Query: 259 QGYWARYVETLV 270
+ A+ + +
Sbjct: 214 KSSEAKVAQREL 225
>gi|30025849|gb|AAP04428.1| 34 kDa outer membrane protein [Coxiella burnetii]
Length = 300
Score = 42.9 bits (98), Expect = 0.045, Method: Composition-based stats.
Identities = 12/60 (20%), Positives = 24/60 (40%)
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
+ +Y A FQ L +Y + + A L E Y+ A +++++P+
Sbjct: 182 TKKQYDKAQASFQNYLNDYPNGSYIANAHYWLGEIYLQQKDRKNAAHEFQTVRDKFPKSE 241
Score = 42.9 bits (98), Expect = 0.053, Method: Composition-based stats.
Identities = 20/190 (10%), Positives = 56/190 (29%), Gaps = 14/190 (7%)
Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
+ + + ++ ++ + + + + S
Sbjct: 113 ELLNNQQRSFYRDLDQRITQLKNLNSNNSDSSNDNSASSSQKPSSGDTSNTNNIQLQDSN 172
Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
++ + Y N Y +A +G YL
Sbjct: 173 TYRQALDLLTKKQYDKAQASFQNYLNDYPNGSY--------------IANAHYWLGEIYL 218
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
++ + A FQ V + +E +A +L + +A+E ++ I++++P+
Sbjct: 219 QQKDRKNAAHEFQTVRDKFPKSEKVLDAKLKLAIIDAEDGKIKQAKEELTEIKKQHPEST 278
Query: 262 WARYVETLVK 271
A+ ++
Sbjct: 279 AAQLANIRLQ 288
>gi|260440449|ref|ZP_05794265.1| hypothetical protein NgonDG_05071 [Neisseria gonorrhoeae DGI2]
gi|291043748|ref|ZP_06569464.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
gi|291012211|gb|EFE04200.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
Length = 237
Score = 42.9 bits (98), Expect = 0.045, Method: Composition-based stats.
Identities = 11/60 (18%), Positives = 21/60 (35%)
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
+ G + I + D+ A E + ++ + L D AR + + YP
Sbjct: 166 RMGNCESVIEIGGRYANRFKDSPTAPEVIFKIGKCQYRLQQKDIARATWRSLIQTYPGSP 225
>gi|116751501|ref|YP_848188.1| TPR repeat-containing protein [Syntrophobacter fumaroxidans MPOB]
gi|116700565|gb|ABK19753.1| Tetratricopeptide TPR_2 repeat protein [Syntrophobacter
fumaroxidans MPOB]
Length = 1057
Score = 42.9 bits (98), Expect = 0.045, Method: Composition-based stats.
Identities = 14/104 (13%), Positives = 30/104 (28%), Gaps = 2/104 (1%)
Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
+ + + Y+ ++ I ++ LA Y ++
Sbjct: 812 TMAQAREWFLRCLNRYPLSPVVDHAAHYVAASYMTENKWQDLIDFYESFLAAYPESRIYP 871
Query: 228 EAMARLVEAYVALALMDEA-REVVSLIQERYPQGYWARYVETLV 270
EA+ + A L D A R + +P+ A +
Sbjct: 872 EALYEMGAAASLLGRTDVASRRYWQAVTF-FPESERAGAAAARL 914
>gi|20091650|ref|NP_617725.1| hypothetical protein MA2826 [Methanosarcina acetivorans C2A]
gi|19916818|gb|AAM06205.1| conserved hypothetical protein [Methanosarcina acetivorans C2A]
Length = 1121
Score = 42.9 bits (98), Expect = 0.046, Method: Composition-based stats.
Identities = 24/217 (11%), Positives = 50/217 (23%), Gaps = 8/217 (3%)
Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
D Y Y KA K ++ +A + + P + + + +
Sbjct: 500 DENYTLAWYGKAFALSKTGDYEEALACYEKVLAAAPDSAEIWYNKGLLLDQLERYQEASD 559
Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
S + Y ++ + + + + K +
Sbjct: 560 CYSQALQINPGYSIARFRLNKDMELYGDSTPNSSEGKDPEVSPKKAIS--GGFWSYLLGY 617
Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA----EHAEE 228
Y + E + + + + ++ L Y A E
Sbjct: 618 KYASSEENSDLSENFDDLSPEFSYDSAWYGKASTYSKLEMYEDALYAYDTALSINPLRTE 677
Query: 229 AMARLVEAYVALALMDEARE-VVSLIQERYPQGY-WA 263
A A L +EA E + W
Sbjct: 678 AWYEKGSALDKLGRSEEALECYKKALDLDPQSSNAWY 714
>gi|258405238|ref|YP_003197980.1| tol-pal system protein YbgF [Desulfohalobium retbaense DSM 5692]
gi|257797465|gb|ACV68402.1| tol-pal system protein YbgF [Desulfohalobium retbaense DSM 5692]
Length = 292
Score = 42.9 bits (98), Expect = 0.046, Method: Composition-based stats.
Identities = 16/127 (12%), Positives = 39/127 (30%), Gaps = 2/127 (1%)
Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204
+ Q L + Y N+ + + + G Y +
Sbjct: 164 PQTFDSPQAMYDEALAQFRK--RNYQNAQALWARFIDENPKSDLVPNAYFWQGESYYQSQ 221
Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
Y A+ +Q V+ + ++ A+ + ++ L R ++ + + P A
Sbjct: 222 NYARAVLAYQEVIERFQESSKYRPALLKQGLSFYKLGKTKPGRLLLQRVIDSAPDSPEAG 281
Query: 265 YVETLVK 271
E ++
Sbjct: 282 RAEAFLE 288
Score = 40.9 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 12/84 (14%), Positives = 34/84 (40%)
Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106
++ + +Y++A+ +++N+ A + + + P + + + Y
Sbjct: 160 EAEAPQTFDSPQAMYDEALAQFRKRNYQNAQALWARFIDENPKSDLVPNAYFWQGESYYQ 219
Query: 107 AGKYQQAASLGEEYITQYPESKNV 130
+ Y +A +E I ++ ES
Sbjct: 220 SQNYARAVLAYQEVIERFQESSKY 243
>gi|91200098|emb|CAJ73141.1| conserved hypothetical protein [Candidatus Kuenenia
stuttgartiensis]
Length = 344
Score = 42.9 bits (98), Expect = 0.046, Method: Composition-based stats.
Identities = 21/216 (9%), Positives = 49/216 (22%), Gaps = 1/216 (0%)
Query: 41 QSSRDVYLDSVTDVRYQREVYEK-AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99
S + + +V+ +E + A+ + K ++A F + P A L
Sbjct: 124 NESTEAFSLAVSLDPTMKEAFRMLALSYTKSGKANEAIANFKKVIELDPRDAKALLELGT 183
Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
+ A Y + + ++ +
Sbjct: 184 LYYKNRMADDAIATFEKYVSLDQGNANVYYNMGCIYGEKNRFDKAVKAYLMALTINPNHV 243
Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219
I Y A N + + ++
Sbjct: 244 PTYYNIGVAYNMMERFDEAIEAFKKVLNLDPENHDALYNLGFAYNKSGLYGESLEICKRL 303
Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
+ ++Y L +EA+ + +E
Sbjct: 304 TELNPANTNVRLLMGDSYNKLGKHEEAKREFDIYKE 339
>gi|119512967|ref|ZP_01632028.1| serine/threonine kinase [Nodularia spumigena CCY9414]
gi|119462380|gb|EAW43356.1| serine/threonine kinase [Nodularia spumigena CCY9414]
Length = 713
Score = 42.9 bits (98), Expect = 0.046, Method: Composition-based stats.
Identities = 29/241 (12%), Positives = 66/241 (27%), Gaps = 9/241 (3%)
Query: 14 AWAYQLYKFALTIFFSIAV-CFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQN 72
++L K+ IF +++ F++G +S V++ + + + E+ + Q
Sbjct: 300 LKNFKLNKYKKAIFIKLSLAIFVIGASGIAS--VFIVNSINAHNAIALSEQGSTLFELQR 357
Query: 73 FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132
+ A + + P + + A + Y E+ +
Sbjct: 358 YQDALAAYQEAVSISPDYVPGWNGQGKTLSQLKKYEEALAAYDQAIQIQPDYVEAWSGRG 417
Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMS---RIVERYTNSPYVKGARFYVTVGRNQL 189
Y + I + + + I + +
Sbjct: 418 FVLRDLQRYPEAIASFDKALQLDNTAPEIWNAKGEIFRNLQQYNNAIQSYNQAIELQPNY 477
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
G + +Y AI ++ + D +A L A L D A +
Sbjct: 478 YQAWYSKGLAFHNLKQYNDAINAYETAIEFKPDYG---QAWYSLGNALFNLNRFDNALKA 534
Query: 250 V 250
Sbjct: 535 Y 535
Score = 35.2 bits (78), Expect = 9.1, Method: Composition-based stats.
Identities = 28/217 (12%), Positives = 56/217 (25%), Gaps = 2/217 (0%)
Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
Y + Y K + F + ++ A + P G A SL + F +
Sbjct: 474 QPNYYQAWYSKGLAFHNLKQYNDAINAYETAIEFKPDYGQAWYSLGNALFNLNRFDNALK 533
Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSY-AQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
A +Y ++ + ++ Y + + + SR + +
Sbjct: 534 AYDKAVQYRPKFYPAWFSRSNILIILRRYPQAIESFDQAIKHNPNDYQAWYSRGWALHQS 593
Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231
Y + Y + ++ + A HA E+
Sbjct: 594 QRYEEAIASYNKAAAIKRNDYQIWYNLGNSQYILQKYQQAIASYDKAVRYQTNHA-ESWY 652
Query: 232 RLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
A + L EA + + P A
Sbjct: 653 SRGNALLNLQRYKEAIDSYDQAIKYKPNYRQAINARN 689
>gi|116329634|ref|YP_799353.1| TPR repeat-containing lipoprotein [Leptospira borgpetersenii
serovar Hardjo-bovis L550]
gi|116332519|ref|YP_802236.1| TPR repeat-containing lipoprotein [Leptospira borgpetersenii
serovar Hardjo-bovis JB197]
gi|116122527|gb|ABJ80420.1| Tetratricopeptide repeat family lipoprotein [Leptospira
borgpetersenii serovar Hardjo-bovis L550]
gi|116127386|gb|ABJ77478.1| Tetratricopeptide repeat family lipoprotein [Leptospira
borgpetersenii serovar Hardjo-bovis JB197]
Length = 187
Score = 42.9 bits (98), Expect = 0.046, Method: Composition-based stats.
Identities = 7/71 (9%), Positives = 24/71 (33%), Gaps = 2/71 (2%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
+F F + + + + + V + +++ K ++ +A E++
Sbjct: 8 RFISIFIFFLTITLFSACSFKQEK--TKELVFIRKTDLNSFQEGNSKFKNGDYLEAIEFY 65
Query: 81 NQCSRDFPFAG 91
++ P
Sbjct: 66 SRDLDVNPDNP 76
>gi|87307368|ref|ZP_01089513.1| hypothetical protein DSM3645_17635 [Blastopirellula marina DSM 3645]
gi|87290108|gb|EAQ81997.1| hypothetical protein DSM3645_17635 [Blastopirellula marina DSM 3645]
Length = 1065
Score = 42.9 bits (98), Expect = 0.046, Method: Composition-based stats.
Identities = 35/251 (13%), Positives = 81/251 (32%), Gaps = 32/251 (12%)
Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
D ++ Y+ ++++++ A + F + +P +A + M Y ++
Sbjct: 810 DDVGEKSAYKLGWAQYQQRDYAAASDAFAVQTSKYPNGPLAADASFMRGECLYKKDQFAD 869
Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL----------MLQYM 162
A S + + S ++ ++ L A ++ R +
Sbjct: 870 ALSAYGQVKSDRLSSNDMRDLWRLHAGQSAAQLKKWDESIRWMNELLTQSPDSPVAAEAQ 929
Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY-----YLKRGEYVAAIPRFQLVL 217
+ N A + K R+ Y ++ +Y AA +F+ V+
Sbjct: 930 YELGWANYNQKKTDEAIQRFLAAADLSPGKTGARARFMLGELYFEKKDYEAAEGQFKRVV 989
Query: 218 ANYSDAEHAEEAMARLVEAYVALA-----------------LMDEAREVVSLIQERYPQG 260
+ A+ +E +A L + EA++ L+ YPQ
Sbjct: 990 LGFGGAKSLDEVKPWQAKAAYELGRCNEVRIRDAIGAPKVRYVSEAKKYYGLVVSDYPQA 1049
Query: 261 YWARYVETLVK 271
A+ + ++
Sbjct: 1050 AEAKLAASRLE 1060
Score = 42.1 bits (96), Expect = 0.083, Method: Composition-based stats.
Identities = 36/237 (15%), Positives = 69/237 (29%), Gaps = 24/237 (10%)
Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
D ++ AV LK ++ A F ++ P + + +LL YS K
Sbjct: 65 DDPLAEKARNNLAVCQLKLDKYADAAGNFYAILKNNPKSELREDALLNLGSTYYSWAK-- 122
Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
+ + + E +Y + Y L +VE++T
Sbjct: 123 SGSPKMFDSAAKTFEQLYKEYPQGKNADQALYFAGESFYLSDQKDRSLGPYKALVEQFTQ 182
Query: 172 SPYVKG----------------------ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
SPY ++F + LAA+ + A
Sbjct: 183 SPYRADGAYAWGVTLEELNKPTEAADVYSKFLAAFPDHDLAAEVRMRQAETVLNQNDFAK 242
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
+ + + A+ RL A + + +A + + I YP+ +
Sbjct: 243 AEQMLTTVTADPQFPLIDHALYRLAFARLKQEKLADAGAIYAQIAADYPKSKYHDES 299
Score = 37.9 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 27/225 (12%), Positives = 66/225 (29%), Gaps = 15/225 (6%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
D + + +Y A L+ Q+ + A FP + + ++A KY
Sbjct: 401 PKDPQAPQALYNGAFAALETQDHAAAARLAKTFVNQFPQHELLLDAKYVAAEGALQEKKY 460
Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD----------QRATKLMLQ 160
A + E I + + ++ +
Sbjct: 461 ADAEKMFRELIAAGDKRPEKSKWRMRLALALLLQNKHQDEIAFLSPIAGTLTDPALKAEA 520
Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG-----RYYLKRGEYVAAIPRFQL 215
+ ++ + + + + ++ + R ++G+ AAI +
Sbjct: 521 FFLLGSSQFALDQFPAAQQSLIASLAAKADWRQADETLLLLSRAQHEQGDDTAAIATVRK 580
Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
+ ++ A+ A RL E Y A +A + +++
Sbjct: 581 MQKQLPNSPLADHAAYRLGEYYYAAGDFAKAAAEYQTVVDKFASS 625
Score = 37.5 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 26/213 (12%), Positives = 66/213 (30%), Gaps = 15/213 (7%)
Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
++ + + A + + P + +A + Y+AG + +AA+ + + ++ S
Sbjct: 567 EQGDDTAAIATVRKMQKQLPNSPLADHAAYRLGEYYYAAGDFAKAAAEYQTVVDKFASSS 626
Query: 129 NVDYVYYLVGMSYAQMI---------------RDVPYDQRATKLMLQYMSRIVERYTNSP 173
+ Y +G S+ Q + + R+ + +
Sbjct: 627 LAPHALYGLGWSHIQQQQGKEARDAFSQLLTKHNDHQLAPQSLHARAVARRLSNDFAGAA 686
Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
A + A G + + A +F + + + ++ + L
Sbjct: 687 SDVDAYLKKSPQAADKADALYLKGLCLVGANDQAGAAAQFAALKKEFPKYRNDDKVLYEL 746
Query: 234 VEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
+ A +A E + + +PQ A
Sbjct: 747 AWSLKASGEPAKATEAFASLAATHPQSSLAAEA 779
Score = 35.9 bits (80), Expect = 6.2, Method: Composition-based stats.
Identities = 26/211 (12%), Positives = 61/211 (28%), Gaps = 23/211 (10%)
Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
+Y A LK++ + A + Q + D+P + +S++++ Y AG + AA
Sbjct: 260 DHALYRLAFARLKQEKLADAGAIYAQIAADYPKSKYHDESMMLAGRCYYRAGDWTAAAKW 319
Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
++ + +D A Q ++V +
Sbjct: 320 LAAASKLSGDTGLEAAHWLCRVYLKTGKPQDAEKLAAAKVAAAQGSLQLVPLLIDQAD-- 377
Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
Y + ++ +Q ++ + A +A+ A
Sbjct: 378 ---------------------ALYDQPQRRGESVRLYQQIVTQHPKDPQAPQALYNGAFA 416
Query: 237 YVALALMDEAREVVSLIQERYPQGYWARYVE 267
+ A + ++PQ +
Sbjct: 417 ALETQDHAAAARLAKTFVNQFPQHELLLDAK 447
>gi|313497576|gb|ADR58942.1| Hypothetical protein, conserved [Pseudomonas putida BIRD-1]
Length = 266
Score = 42.9 bits (98), Expect = 0.047, Method: Composition-based stats.
Identities = 16/111 (14%), Positives = 38/111 (34%), Gaps = 1/111 (0%)
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI-GRYYLKRGEYVAAIPRFQLVLANY 220
I ++ + F +Q A G L +G+ A F V Y
Sbjct: 154 FDLIKQKDFDKASQAFNAFLRKYPNSQYAGNAQYWLGEVNLAKGDLQGASQAFAQVSQKY 213
Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+++ +L + + D+ + ++ + +YP A+ + ++
Sbjct: 214 PKHSKVPDSLYKLADVERRMGHTDKVKGILQQVVTQYPGTSAAQLAQRDLQ 264
Score = 40.5 bits (92), Expect = 0.22, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 32/78 (41%), Gaps = 1/78 (1%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ +K+ ++ A F L Y ++++A A L E +A + A + +
Sbjct: 149 YYDAAFDLIKQKDFDKASQAFNAFLRKYPNSQYAGNAQYWLGEVNLAKGDLQGASQAFAQ 208
Query: 253 IQERYPQ-GYWARYVETL 269
+ ++YP+ + L
Sbjct: 209 VSQKYPKHSKVPDSLYKL 226
Score = 38.2 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 35/84 (41%)
Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
D ++ Y+ A +K+++F KA + FN R +P + A + V + G
Sbjct: 138 SQPGDPAKEKLYYDAAFDLIKQKDFDKASQAFNAFLRKYPNSQYAGNAQYWLGEVNLAKG 197
Query: 109 KYQQAASLGEEYITQYPESKNVDY 132
Q A+ + +YP+ V
Sbjct: 198 DLQGASQAFAQVSQKYPKHSKVPD 221
>gi|224369488|ref|YP_002603652.1| AmiC [Desulfobacterium autotrophicum HRM2]
gi|223692205|gb|ACN15488.1| AmiC [Desulfobacterium autotrophicum HRM2]
Length = 568
Score = 42.9 bits (98), Expect = 0.047, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 34/82 (41%), Gaps = 7/82 (8%)
Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL-------ALMDEAREV 249
R +V I +Q V +++ ++ A M R + Y+ L EA ++
Sbjct: 48 PDNLKSRKAWVNCIASYQRVYSDHPESPWAAAGMYRSAQLYLDLSQRSSNKNDKTEAVDL 107
Query: 250 VSLIQERYPQGYWARYVETLVK 271
++ IQ YP+ + L+K
Sbjct: 108 LNRIQGHYPKSAYKDKAVHLLK 129
>gi|149924351|ref|ZP_01912719.1| tetratricopeptide repeat protein [Plesiocystis pacifica SIR-1]
gi|149814789|gb|EDM74360.1| tetratricopeptide repeat protein [Plesiocystis pacifica SIR-1]
Length = 1270
Score = 42.9 bits (98), Expect = 0.047, Method: Composition-based stats.
Identities = 28/238 (11%), Positives = 63/238 (26%), Gaps = 19/238 (7%)
Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
Y+ D + +Y +A L + F +A + F A+
Sbjct: 595 SSYDIYTKYVKKKDDKELPKIMYHRAKLMMMHNKFDEAKPLLMEMITKFDDVKGAQIYAA 654
Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL- 157
+ + + + ++ + GM + + L
Sbjct: 655 WCSAMLVDLLTIKWLDKNNTPAQIIETSEELEEWATKIQGMKVWNHPENSAVREAVPTLL 714
Query: 158 ---------MLQYMSRIVER---------YTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
+ +I + F ++
Sbjct: 715 AGIGWKKGMAYRDAGKIYVEGGEGGDPAGFEKCAAQFIEVFNNFEDHDRADTLLWNAADC 774
Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
+ AI + +L + D++HA++ + L E+Y A+A ++ E E Y
Sbjct: 775 SDAAYQVGQAIGIRKALLDRFPDSDHAKDTLHYLAESYQAVAYYSDSAENYEKFAEEY 832
>gi|310825327|ref|YP_003957685.1| hypothetical protein STAUR_8103 [Stigmatella aurantiaca DW4/3-1]
gi|309398399|gb|ADO75858.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
Length = 308
Score = 42.9 bits (98), Expect = 0.047, Method: Composition-based stats.
Identities = 14/144 (9%), Positives = 48/144 (33%), Gaps = 3/144 (2%)
Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
+ ++ +S + + + ++ ++ + N + +
Sbjct: 72 DVYWLEQRKVKEAVSVYKELLVQCPESPEALEARIILAELLRVHYNDLRGAIDQLTAALQ 131
Query: 186 R--NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL-AL 242
R Q A ++ + Y + +Y + ++ + + ++A+ +A +
Sbjct: 132 RNPPQGAELHYQVAKLYFELADYAQCELEATRLAERFATSAYVDDALFLRAQAIQMMEGR 191
Query: 243 MDEAREVVSLIQERYPQGYWARYV 266
EA + ++ R+P A +
Sbjct: 192 RQEASRAYADLRTRFPDSELAAHA 215
>gi|254564207|ref|YP_003071302.1| hypothetical protein METDI5900 [Methylobacterium extorquens DM4]
gi|254271485|emb|CAX27500.1| conserved hypothetical protein; putative exported protein
[Methylobacterium extorquens DM4]
Length = 341
Score = 42.9 bits (98), Expect = 0.047, Method: Composition-based stats.
Identities = 22/108 (20%), Positives = 42/108 (38%), Gaps = 5/108 (4%)
Query: 157 LMLQYMSRIVERYTNSPY----VKGARFYVTVGRNQLAAKEVEI-GRYYLKRGEYVAAIP 211
Y + +F + R++L K G YL+R A
Sbjct: 214 DAQADFEAAYALIRERQYEQAEMSLRQFIQSHPRDRLVPKATYWLGESYLQRSRSREAAE 273
Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
+F V +Y+++ A EAM +L + AL +A ++ ++ ++P
Sbjct: 274 QFLKVSTDYANSPVAPEAMLKLGTSLHALGAKAQACATLAEVERKFPS 321
Score = 37.9 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 26/78 (33%)
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
A + E ++ +Y A + + ++ +A L E+Y+ + EA E
Sbjct: 214 DAQADFEAAYALIRERQYEQAEMSLRQFIQSHPRDRLVPKATYWLGESYLQRSRSREAAE 273
Query: 249 VVSLIQERYPQGYWARYV 266
+ Y A
Sbjct: 274 QFLKVSTDYANSPVAPEA 291
>gi|240141699|ref|YP_002966179.1| hypothetical protein MexAM1_META1p5301 [Methylobacterium extorquens
AM1]
gi|240011676|gb|ACS42902.1| conserved hypothetical protein; putative exported protein
[Methylobacterium extorquens AM1]
Length = 341
Score = 42.9 bits (98), Expect = 0.047, Method: Composition-based stats.
Identities = 22/108 (20%), Positives = 42/108 (38%), Gaps = 5/108 (4%)
Query: 157 LMLQYMSRIVERYTNSPY----VKGARFYVTVGRNQLAAKEVEI-GRYYLKRGEYVAAIP 211
Y + +F + R++L K G YL+R A
Sbjct: 214 DAQADFEAAYALIRERQYEQAEMSLRQFIQSHPRDRLVPKATYWLGESYLQRSRSREAAE 273
Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
+F V +Y+++ A EAM +L + AL +A ++ ++ ++P
Sbjct: 274 QFLKVSTDYANSPVAPEAMLKLGTSLHALGAKAQACATLAEVERKFPS 321
Score = 37.9 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 26/78 (33%)
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
A + E ++ +Y A + + ++ +A L E+Y+ + EA E
Sbjct: 214 DAQADFEAAYALIRERQYEQAEMSLRQFIQSHPRDRLVPKATYWLGESYLQRSRSREAAE 273
Query: 249 VVSLIQERYPQGYWARYV 266
+ Y A
Sbjct: 274 QFLKVSTDYANSPVAPEA 291
>gi|218533184|ref|YP_002424000.1| tol-pal system protein YbgF [Methylobacterium chloromethanicum CM4]
gi|218525487|gb|ACK86072.1| tol-pal system protein YbgF [Methylobacterium chloromethanicum CM4]
Length = 341
Score = 42.9 bits (98), Expect = 0.047, Method: Composition-based stats.
Identities = 22/108 (20%), Positives = 42/108 (38%), Gaps = 5/108 (4%)
Query: 157 LMLQYMSRIVERYTNSPY----VKGARFYVTVGRNQLAAKEVEI-GRYYLKRGEYVAAIP 211
Y + +F + R++L K G YL+R A
Sbjct: 214 DAQADFEAAYALIRERQYEQAEMSLRQFIQSHPRDRLVPKATYWLGESYLQRSRSREAAE 273
Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
+F V +Y+++ A EAM +L + AL +A ++ ++ ++P
Sbjct: 274 QFLKVSTDYANSPVAPEAMLKLGTSLHALGAKAQACATLAEVERKFPS 321
Score = 37.9 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 26/78 (33%)
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
A + E ++ +Y A + + ++ +A L E+Y+ + EA E
Sbjct: 214 DAQADFEAAYALIRERQYEQAEMSLRQFIQSHPRDRLVPKATYWLGESYLQRSRSREAAE 273
Query: 249 VVSLIQERYPQGYWARYV 266
+ Y A
Sbjct: 274 QFLKVSTDYANSPVAPEA 291
>gi|163854238|ref|YP_001642281.1| tol-pal system protein YbgF [Methylobacterium extorquens PA1]
gi|163665843|gb|ABY33210.1| tol-pal system protein YbgF [Methylobacterium extorquens PA1]
Length = 341
Score = 42.9 bits (98), Expect = 0.047, Method: Composition-based stats.
Identities = 22/108 (20%), Positives = 42/108 (38%), Gaps = 5/108 (4%)
Query: 157 LMLQYMSRIVERYTNSPY----VKGARFYVTVGRNQLAAKEVEI-GRYYLKRGEYVAAIP 211
Y + +F + R++L K G YL+R A
Sbjct: 214 DAQADFEAAYALIRERQYEQAEMSLRQFIQSHPRDRLVPKATYWLGESYLQRSRSREAAE 273
Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
+F V +Y+++ A EAM +L + AL +A ++ ++ ++P
Sbjct: 274 QFLKVSTDYANSPVAPEAMLKLGTSLHALGAKAQACATLAEVERKFPS 321
Score = 37.9 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 26/78 (33%)
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
A + E ++ +Y A + + ++ +A L E+Y+ + EA E
Sbjct: 214 DAQADFEAAYALIRERQYEQAEMSLRQFIQSHPRDRLVPKATYWLGESYLQRSRSREAAE 273
Query: 249 VVSLIQERYPQGYWARYV 266
+ Y A
Sbjct: 274 QFLKVSTDYANSPVAPEA 291
>gi|126656534|ref|ZP_01727795.1| soluble lytic transglycosylase [Cyanothece sp. CCY0110]
gi|126622220|gb|EAZ92927.1| soluble lytic transglycosylase [Cyanothece sp. CCY0110]
Length = 727
Score = 42.9 bits (98), Expect = 0.047, Method: Composition-based stats.
Identities = 23/221 (10%), Positives = 49/221 (22%), Gaps = 14/221 (6%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
+ +Y+ + +A E F Q K + KY
Sbjct: 153 PDSLASAEALYQLGK--YDASYWDQAIEKFPQHPSIQTVIREQLKENPKQPKLLLLLAKY 210
Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ--RATKLMLQYMSRIVER 168
+ + + + + + A K +
Sbjct: 211 AANEPQTNAIRDRLVDEYAGELTPEDWQVIADGYWEVNDFYKGAIAYKKADKTPQNYYRI 270
Query: 169 YTNSPYVKGAR--------FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220
+ + A + + + AI F ++ +
Sbjct: 271 ARGQQVQPPGENKETVIAAYRQLMFGFPKAEETALGLKRLAQLSPPQTAITYFDEIIQKF 330
Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
+ A EA+ L EA +V + +YP
Sbjct: 331 PE--QAPEALLDKAALLDKLNRKAEAAKVRQTLLSKYPNSD 369
>gi|297620412|ref|YP_003708549.1| hypothetical protein wcw_0168 [Waddlia chondrophila WSU 86-1044]
gi|297375713|gb|ADI37543.1| hypothetical protein wcw_0168 [Waddlia chondrophila WSU 86-1044]
Length = 664
Score = 42.9 bits (98), Expect = 0.048, Method: Composition-based stats.
Identities = 29/254 (11%), Positives = 70/254 (27%), Gaps = 9/254 (3%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV--YEKAVLFLKEQNFSKA 76
+ + L I SIAV + + + + + + ++ Y+ A FL+ Q +A
Sbjct: 1 MRQLTLIIGISIAVIAMTSSIKTTPKPEKIQQNPHIDSGKQAKDYKTAQEFLENQEPEEA 60
Query: 77 YEYFNQCSRDF-----PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
E ++ + + S ++ E + S V
Sbjct: 61 LEIIHRYKTEMESLSPQGLKWIELFIQGSVDIKDVKQLVILYEFFPEIFKEHEDASLLVA 120
Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
Y + + R TK ++ + + + N A
Sbjct: 121 DAYLNTNNTKNYKKIRSLWTDRETKAASWFLLDVDLTLLEGKRPEAIGKLKSRTFNNKAD 180
Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
+ L+ GE + + Y + + + ++ A++
Sbjct: 181 VGRLVRLALLEGGEDPKKAWFY--LAEAYGKDPFNPDVRSYRAKLLESVGKHSLAQKEYQ 238
Query: 252 LIQERYPQGYWARY 265
+ P + +
Sbjct: 239 AASQISPSNLFLKD 252
>gi|115373453|ref|ZP_01460750.1| tetratricopeptide repeat domain protein [Stigmatella aurantiaca
DW4/3-1]
gi|115369459|gb|EAU68397.1| tetratricopeptide repeat domain protein [Stigmatella aurantiaca
DW4/3-1]
Length = 216
Score = 42.9 bits (98), Expect = 0.048, Method: Composition-based stats.
Identities = 13/113 (11%), Positives = 40/113 (35%), Gaps = 3/113 (2%)
Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGR--NQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
++ ++ + N + + R Q A ++ + Y + +Y
Sbjct: 11 EARIILAELLRVHYNDLRGAIDQLTAALQRNPPQGAELHYQVAKLYFELADYAQCELEAT 70
Query: 215 LVLANYSDAEHAEEAMARLVEAYVAL-ALMDEAREVVSLIQERYPQGYWARYV 266
+ ++ + + ++A+ +A + EA + ++ R+P A +
Sbjct: 71 RLAERFATSAYVDDALFLRAQAIQMMEGRRQEASRAYADLRTRFPDSELAAHA 123
>gi|206603339|gb|EDZ39819.1| Protein of unknown function [Leptospirillum sp. Group II '5-way
CG']
Length = 231
Score = 42.9 bits (98), Expect = 0.048, Method: Composition-based stats.
Identities = 27/211 (12%), Positives = 63/211 (29%), Gaps = 23/211 (10%)
Query: 50 SVTDVRYQREVYEKA-VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
S + + YE + L + KA ++ + + + ++ + A G
Sbjct: 17 SPSSPLAGKAFYELGRMDDLYGNDPQKAAGHYMKSLENLKDGSIRQRVSIDLATDLEHLG 76
Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
K +A ++ S V+ + + + + L Y ++ +R
Sbjct: 77 KPDEALAILRGLDGSNLLSTFEPRVWD--------LTARILEHEGHYREALGYYKKVSDR 128
Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
+ + + +IG + +A + Y D+
Sbjct: 129 EPD--------------SFRGQKAQFKIGLLESLASDLPSAQRDLGRFVKRYPDSPFTPV 174
Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQ 259
A L + L +A ++ I+ YP
Sbjct: 175 ARFNLALTWDRLGDHQKALSILESIKGSYPN 205
>gi|220925334|ref|YP_002500636.1| tol-pal system protein YbgF [Methylobacterium nodulans ORS 2060]
gi|219949941|gb|ACL60333.1| tol-pal system protein YbgF [Methylobacterium nodulans ORS 2060]
Length = 304
Score = 42.9 bits (98), Expect = 0.048, Method: Composition-based stats.
Identities = 22/99 (22%), Positives = 45/99 (45%), Gaps = 1/99 (1%)
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI-GRYYLKRGEYVAAIPRFQLVLANY 220
+ +++R + +F + R+ L G YL+R A +F V +Y
Sbjct: 186 YAYVLQRQYEQAEMSLRQFIQSHPRDALVPDATYWLGETYLQRNRTREAAEQFLKVSTDY 245
Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
+ + A EAM +L + AL ++A ++ ++ ++PQ
Sbjct: 246 ARSRKAPEAMLKLGASLNALGAREQACATLAELERKFPQ 284
Score = 38.6 bits (87), Expect = 0.81, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 31/83 (37%), Gaps = 2/83 (2%)
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
A + E+ Y+ + +Y A + + ++ +A L E Y+ EA E
Sbjct: 177 DAKADYEMAYAYVLQRQYEQAEMSLRQFIQSHPRDALVPDATYWLGETYLQRNRTREAAE 236
Query: 249 VVSLIQERYPQGYWARYVETLVK 271
+ Y + + E ++K
Sbjct: 237 QFLKVSTDYARSR--KAPEAMLK 257
>gi|26987959|ref|NP_743384.1| hypothetical protein PP_1224 [Pseudomonas putida KT2440]
gi|60416287|sp|P0A130|Y1224_PSEPK RecName: Full=Uncharacterized protein PP_1224; Flags: Precursor
gi|60416350|sp|P0A131|YOPRL_PSEPU RecName: Full=Uncharacterized protein in oprL 3'region; AltName:
Full=ORF2; Flags: Precursor
gi|24982672|gb|AAN66848.1|AE016313_7 conserved hypothetical protein [Pseudomonas putida KT2440]
gi|861088|emb|CAA52295.1| hypothetical protein [Pseudomonas putida]
Length = 268
Score = 42.9 bits (98), Expect = 0.048, Method: Composition-based stats.
Identities = 16/111 (14%), Positives = 38/111 (34%), Gaps = 1/111 (0%)
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI-GRYYLKRGEYVAAIPRFQLVLANY 220
I ++ + F +Q A G L +G+ A F V Y
Sbjct: 156 FDLIKQKDFDKASQAFNAFLRKYPNSQYAGNAQYWLGEVNLAKGDLQGASQAFAQVSQKY 215
Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+++ +L + + D+ + ++ + +YP A+ + ++
Sbjct: 216 PKHSKVPDSLYKLADVERRMGHTDKVKGILQQVVTQYPGTSAAQLAQRDLQ 266
Score = 40.5 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 32/78 (41%), Gaps = 1/78 (1%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ +K+ ++ A F L Y ++++A A L E +A + A + +
Sbjct: 151 YYDAAFDLIKQKDFDKASQAFNAFLRKYPNSQYAGNAQYWLGEVNLAKGDLQGASQAFAQ 210
Query: 253 IQERYPQ-GYWARYVETL 269
+ ++YP+ + L
Sbjct: 211 VSQKYPKHSKVPDSLYKL 228
Score = 38.2 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 35/84 (41%)
Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
D ++ Y+ A +K+++F KA + FN R +P + A + V + G
Sbjct: 140 SQPGDPAKEKLYYDAAFDLIKQKDFDKASQAFNAFLRKYPNSQYAGNAQYWLGEVNLAKG 199
Query: 109 KYQQAASLGEEYITQYPESKNVDY 132
Q A+ + +YP+ V
Sbjct: 200 DLQGASQAFAQVSQKYPKHSKVPD 223
>gi|85713386|ref|ZP_01044393.1| Uncharacterized conserved protein, contains TPR repeats [Idiomarina
baltica OS145]
gi|85692792|gb|EAQ30783.1| Uncharacterized conserved protein, contains TPR repeats [Idiomarina
baltica OS145]
Length = 261
Score = 42.9 bits (98), Expect = 0.048, Method: Composition-based stats.
Identities = 18/114 (15%), Positives = 37/114 (32%), Gaps = 2/114 (1%)
Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
+ M + + + + L+ Y AAIP F+ L
Sbjct: 109 SMNDMQTVPTSNEGASNASSSGSNGYSANMSENDAYDKAIALVLEDKRYDAAIPAFESFL 168
Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
N+ ++ + A L + A +A + + + YP + + L+K
Sbjct: 169 QNFPNSTYVPNAHYWLGQLLYAQQEYQKAHDHFKQVVDNYPDSN--KRADCLLK 220
Score = 38.6 bits (87), Expect = 0.87, Method: Composition-based stats.
Identities = 18/165 (10%), Positives = 44/165 (26%), Gaps = 14/165 (8%)
Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
+ Q E + S + Y + + + + +
Sbjct: 108 YSMNDMQTVPTSNEGASNASSSGSNGYSANMSENDAYDKAIALVLEDKRYDAAIPAFESF 167
Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
++ + NS YV A +++ + F+ V+ NY D+
Sbjct: 168 LQNFPNSTYVPNAHYWLGQLLYAQQEYQKAH--------------DHFKQVVDNYPDSNK 213
Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
+ + +L +A+ + Y A + +
Sbjct: 214 RADCLLKLGVIAAEQGKTADAKTFYQQVLTEYSDSTEANLAKQRL 258
>gi|15618578|ref|NP_224864.1| hypothetical protein CPn0668 [Chlamydophila pneumoniae CWL029]
gi|15836200|ref|NP_300724.1| hypothetical protein CPj0668 [Chlamydophila pneumoniae J138]
gi|33242025|ref|NP_876966.1| hypothetical protein CpB0694 [Chlamydophila pneumoniae TW-183]
gi|4376968|gb|AAD18807.1| CT547 hypothetical protein [Chlamydophila pneumoniae CWL029]
gi|8979040|dbj|BAA98875.1| CT547 hypothetical protein [Chlamydophila pneumoniae J138]
gi|33236535|gb|AAP98623.1| hypothetical protein CpB0694 [Chlamydophila pneumoniae TW-183]
Length = 318
Score = 42.9 bits (98), Expect = 0.049, Method: Composition-based stats.
Identities = 24/189 (12%), Positives = 59/189 (31%), Gaps = 5/189 (2%)
Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
E + + FLK+ NF KA F + FP + ++ + ++ A
Sbjct: 42 SAEEYFSQGQEFLKKGNFRKALLCFGIITHHFPRDILRNQAQYLIGVCYFTQDHPDLADK 101
Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
Y+ + + ++ + +R L+ +++ ++ +
Sbjct: 102 AFASYLQLPDAEYSEELFQMKYAIA-----QRFAQGKRKRICRLEGFPKLMNADEDALRI 156
Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
++ A + + + A + + + + EA RL E
Sbjct: 157 YDEILTAFPSKDLGAQALYSKAALLIVKNDLTEATKTLKKLTLQFPLHILSSEAFVRLSE 216
Query: 236 AYVALALMD 244
Y+ A +
Sbjct: 217 IYLQQAKKE 225
>gi|260219496|emb|CBA26341.1| hypothetical protein Csp_E34290 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 264
Score = 42.9 bits (98), Expect = 0.050, Method: Composition-based stats.
Identities = 20/113 (17%), Positives = 34/113 (30%), Gaps = 14/113 (12%)
Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
+ RY S Y + F++ G +Y A F+ ++
Sbjct: 162 AQSVFLDFLNRYPTSGYRPSSLFWL--------------GSAQYATKDYKDAQANFRSLV 207
Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
D A EA+ L L AR+ + + YP A + +
Sbjct: 208 QQSGDHLRAPEALLALANCQSELKDTKAARKTLEELIASYPSSEAASAAKDRL 260
>gi|296125154|ref|YP_003632406.1| Crp/Fnr family transcriptional regulator [Brachyspira murdochii DSM
12563]
gi|296016970|gb|ADG70207.1| putative transcriptional regulator, Crp/Fnr family [Brachyspira
murdochii DSM 12563]
Length = 329
Score = 42.9 bits (98), Expect = 0.050, Method: Composition-based stats.
Identities = 15/221 (6%), Positives = 53/221 (23%), Gaps = 16/221 (7%)
Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
+ +Y + K + + A + + + ++
Sbjct: 118 ENDINDEAPDPLEGLYNIGEFYFKNKKYKNALYAYKRYLQYADEDSTYYNTVKEKIEECK 177
Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
+ + ++ ++ Y+ ++ + +
Sbjct: 178 DELDITDDSDIAP-PNSEVSSAEKTAAQAQTAVNDPVYNKAVELYNSNNYVNSIKTFNTL 236
Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
++ +G+ Y +Y A + Y + +
Sbjct: 237 LKSSN---------------AAVAENSMFYMGKCYYNLNKYDNASTVLLSAIKKYPKSSN 281
Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
+EA+ L + A +A+ + P +++
Sbjct: 282 VKEAILFLAKTCEAKGDKTKAKAYYQKVISMPPMDNFSKEA 322
>gi|126327367|ref|XP_001366386.1| PREDICTED: hypothetical protein [Monodelphis domestica]
Length = 825
Score = 42.9 bits (98), Expect = 0.050, Method: Composition-based stats.
Identities = 21/212 (9%), Positives = 47/212 (22%), Gaps = 6/212 (2%)
Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD---FPFAGVARKSLLMSAFVQYSAG 108
+D + K ++ KA E++ + R+ A A
Sbjct: 480 SDRYNPSALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYKKLNRLDEAL 539
Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
Q Y + + + L + + +
Sbjct: 540 DCFLKLHAILRNSAQVLYQIANVYEIMEDPNQSIEWLMQLISVVPTDSRALSKLGELYDN 599
Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
+ + +G YY+ AI F+ +
Sbjct: 600 EGDKSQAFQYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAIKYFERAALIQPTQVKWQ- 658
Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQG 260
+ Y +A + I ++P+
Sbjct: 659 --LMVASCYRRSGNYQKALDTYKEIHRKFPEN 688
Score = 37.5 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 21/203 (10%), Positives = 58/203 (28%), Gaps = 7/203 (3%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
KA+ +L++++F++A E + A + L + + + +
Sbjct: 421 NKAITYLRQKDFNQAVETLKMFEKKDSRVKSAAATNLSFLYYLENEFTQANSYADLAVNS 480
Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVP----YDQRATKLMLQYMSRIVERYTNSPYVKG 177
+Y S + + + + + + L + ++
Sbjct: 481 DRYNPSALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYKKLNRLDEALD 540
Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
+ A +I Y + +I +++ A+++L E Y
Sbjct: 541 CFLKLHAILRNSAQVLYQIANVYEIMEDPNQSIEWLMQLISVVPTDS---RALSKLGELY 597
Query: 238 VALALMDEAREVVSLIQERYPQG 260
+A + +P
Sbjct: 598 DNEGDKSQAFQYYYESYRYFPSN 620
>gi|282878978|ref|ZP_06287742.1| tetratricopeptide repeat protein [Prevotella buccalis ATCC 35310]
gi|281298977|gb|EFA91382.1| tetratricopeptide repeat protein [Prevotella buccalis ATCC 35310]
Length = 1106
Score = 42.9 bits (98), Expect = 0.050, Method: Composition-based stats.
Identities = 12/71 (16%), Positives = 25/71 (35%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ K + + ++ Y EH ++A L Y L A + L
Sbjct: 588 FHSGVIFKDKLDNLKLSEKALRRLVDGYPSYEHIDKAYYHLFLLYSRLGQSGVAARYIQL 647
Query: 253 IQERYPQGYWA 263
++ ++P+ W
Sbjct: 648 LKAQHPKSEWT 658
>gi|237755666|ref|ZP_04584277.1| lipoprotein [Sulfurihydrogenibium yellowstonense SS-5]
gi|237692178|gb|EEP61175.1| lipoprotein [Sulfurihydrogenibium yellowstonense SS-5]
Length = 311
Score = 42.9 bits (98), Expect = 0.050, Method: Composition-based stats.
Identities = 40/214 (18%), Positives = 67/214 (31%), Gaps = 11/214 (5%)
Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
+ F I+ + + + K + K+ + KA E
Sbjct: 2 KRFVVFLISGFVIASCADKGQKLYEGQEKL---------SKGLELYKKGEYKKAREELKN 52
Query: 83 CSRDFPF--AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
++ A Y+ +Y A EE+I +P S V Y + MS
Sbjct: 53 AIFKSQGLTPDQIMEARFALADSYYNREEYIDAIVEFEEFIALFPTSPKVPEALYKLAMS 112
Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
Y + D D + I+ Y NS YVK + + A + I Y
Sbjct: 113 YLFVSPDYKRDMTYVNKAQEKAEEIISSYPNSKYVKATKEILKKVNEIKAKHTLYIAETY 172
Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234
K G+ +A ++ NY D + +L
Sbjct: 173 EKYGKPYSASVYYREAYTNYKDYIEKDYVAYKLA 206
Score = 39.0 bits (88), Expect = 0.72, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 41/93 (44%), Gaps = 8/93 (8%)
Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV-------- 238
+Q+ + Y R EY+ AI F+ +A + + EA+ +L +Y+
Sbjct: 63 DQIMEARFALADSYYNREEYIDAIVEFEEFIALFPTSPKVPEALYKLAMSYLFVSPDYKR 122
Query: 239 ALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+ +++A+E I YP + + + ++K
Sbjct: 123 DMTYVNKAQEKAEEIISSYPNSKYVKATKEILK 155
>gi|270210255|gb|ACZ64519.1| IFT88-like protein [Schmidtea mediterranea]
Length = 294
Score = 42.9 bits (98), Expect = 0.051, Method: Composition-based stats.
Identities = 19/199 (9%), Positives = 49/199 (24%), Gaps = 8/199 (4%)
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
Y + K F +A + F + + +
Sbjct: 1 YNMGLSEKKMGRFEEALDCFFKLHAILRNNATVIYQIADVYMKLEEVPNQSLEWFMQLHG 60
Query: 121 ITQYPESKNVDYVYYLVGMSYAQM----IRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
+ D + +++++
Sbjct: 61 LIPTDSKLLQKLGEIYDEEGDKSQAFSVYVDSFKYYPSNLEVIEWLGAYYIESQFCEKAI 120
Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
+ + + I + + G Y A+ ++ + + D E + LV
Sbjct: 121 SYFERAALMQPSQVKWLLMIASCHRRSGNYQQALETYKSIHRKFPD---NVECLQFLVRI 177
Query: 237 YVALALMDEAREVVSLIQE 255
Y + L EA E ++ +++
Sbjct: 178 YTDMGLP-EAAEYLNRLKK 195
>gi|224418202|ref|ZP_03656208.1| hypothetical protein HcanM9_02883 [Helicobacter canadensis MIT
98-5491]
gi|253827529|ref|ZP_04870414.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
gi|313141737|ref|ZP_07803930.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
gi|253510935|gb|EES89594.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
gi|313130768|gb|EFR48385.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
Length = 294
Score = 42.9 bits (98), Expect = 0.051, Method: Composition-based stats.
Identities = 15/105 (14%), Positives = 35/105 (33%)
Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
+ G + A +G + +Y AI +++ Y A++
Sbjct: 188 LLEQKEYKLASEYLQKAVEGHYKPARGNYLLGESAFYQKKYEDAIYYYKVSAERYDKADY 247
Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
M +A+ + + A + + + YP A+ + L+
Sbjct: 248 MPLLMLHTAQAFEKINNKENALKFLESLVVLYPDSKEAQEAKKLL 292
>gi|160871956|ref|ZP_02062088.1| conserved hypothetical protein [Rickettsiella grylli]
gi|159120755|gb|EDP46093.1| conserved hypothetical protein [Rickettsiella grylli]
Length = 265
Score = 42.9 bits (98), Expect = 0.051, Method: Composition-based stats.
Identities = 27/258 (10%), Positives = 63/258 (24%), Gaps = 25/258 (9%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + + L S + L + + +L + +A++
Sbjct: 1 MISIVKQSIILLFIVTLTACSIFSRPNNQLPVSASDANV----QLGLAYLNHGDVQRAHQ 56
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
P + A+ ++ + S + Y +
Sbjct: 57 KLLLAEEQAPRSLQAQGAMGYFLESTGNF-------SSADAYYRRAIALNPKSGAAQNNY 109
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
++ + L LQ S + N + ++
Sbjct: 110 GTFLCRRGRYSQADQHFLLALQDPSYLNAAQVNENAG--LCAMQIPNTKKAIGYFMKAIS 167
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA------------YVALALMDEA 246
K + R NY A+ + +LV+A AL + A
Sbjct: 168 QDPKLALSWLELGRINYQAKNYQQAQQYLDHYMQLVKAPTANALWLGAVLARALGNQEVA 227
Query: 247 REVVSLIQERYPQGYWAR 264
++Q ++P +
Sbjct: 228 ANYTLMLQTKFPNSDAYK 245
>gi|323138992|ref|ZP_08074052.1| tol-pal system protein YbgF [Methylocystis sp. ATCC 49242]
gi|322395746|gb|EFX98287.1| tol-pal system protein YbgF [Methylocystis sp. ATCC 49242]
Length = 334
Score = 42.9 bits (98), Expect = 0.052, Method: Composition-based stats.
Identities = 15/66 (22%), Positives = 30/66 (45%)
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+G + RG + A ++ + Y + A +A+ RL ++ A+ ++A S I
Sbjct: 251 FNLGESFFLRGRHREAAEKYLEISTKYGQSAQAPDALLRLGQSLSAMGAKEQACASFSEI 310
Query: 254 QERYPQ 259
+YP
Sbjct: 311 GVKYPN 316
>gi|163796932|ref|ZP_02190888.1| hypothetical protein BAL199_19453 [alpha proteobacterium BAL199]
gi|159177679|gb|EDP62230.1| hypothetical protein BAL199_19453 [alpha proteobacterium BAL199]
Length = 318
Score = 42.9 bits (98), Expect = 0.052, Method: Composition-based stats.
Identities = 17/99 (17%), Positives = 32/99 (32%), Gaps = 1/99 (1%)
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI-GRYYLKRGEYVAAIPRFQLVLANY 220
+V+ +S F + LA G + R Y A F Y
Sbjct: 200 FDYLVKHDYDSAEQAFRAFTKAHPDDPLAGNAQYWMGETFYVRQRYQEAAVAFLEGYQKY 259
Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
+ + + + +L A + EA + +Q+ +P
Sbjct: 260 PKSPKSADNLLKLGMALGQVGQPAEACSAFARLQKEFPD 298
Score = 39.0 bits (88), Expect = 0.74, Method: Composition-based stats.
Identities = 13/69 (18%), Positives = 26/69 (37%), Gaps = 2/69 (2%)
Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
+ +Y +A F+ + D A A + E + EA ++YP+
Sbjct: 205 KHDYDSAEQAFRAFTKAHPDDPLAGNAQYWMGETFYVRQRYQEAAVAFLEGYQKYPKSP- 263
Query: 263 ARYVETLVK 271
+ + L+K
Sbjct: 264 -KSADNLLK 271
>gi|153008552|ref|YP_001369767.1| Tol-Pal system YbgF [Ochrobactrum anthropi ATCC 49188]
gi|151560440|gb|ABS13938.1| Tol-Pal system YbgF [Ochrobactrum anthropi ATCC 49188]
Length = 505
Score = 42.9 bits (98), Expect = 0.052, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 28/78 (35%), Gaps = 2/78 (2%)
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+ YL G+Y AA F+ + Y + EA L E+ EA V
Sbjct: 385 YQASYQYLMSGDYKAAETGFREHVKRYPADPNTAEARFWLGESLYGQGRYPEAATVFIDT 444
Query: 254 QERYPQGYWARYVETLVK 271
Q YP R E + K
Sbjct: 445 QRDYPDSK--RAPENMFK 460
Score = 39.4 bits (89), Expect = 0.61, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 31/93 (33%), Gaps = 5/93 (5%)
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
A +G +G Y A F +Y D++ A E M +L
Sbjct: 407 HVKRYPADPNTAEARFWLGESLYGQGRYPEAATVFIDTQRDYPDSKRAPENMFKLGMTLE 466
Query: 239 ALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+ D A + I ERYP + ++K
Sbjct: 467 KMDNRDVACATFAQIPERYP-----KAAPAILK 494
>gi|170738631|ref|YP_001767286.1| tol-pal system protein YbgF [Methylobacterium sp. 4-46]
gi|168192905|gb|ACA14852.1| tol-pal system protein YbgF [Methylobacterium sp. 4-46]
Length = 313
Score = 42.9 bits (98), Expect = 0.052, Method: Composition-based stats.
Identities = 22/99 (22%), Positives = 46/99 (46%), Gaps = 1/99 (1%)
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI-GRYYLKRGEYVAAIPRFQLVLANY 220
+ +++R ++ +F + R+ L G YL+R A +F V +Y
Sbjct: 195 YAYVLQRQYEQAEMRLRQFIQSHPRDALVPDATYWLGETYLQRNRTREAAEQFLKVSTDY 254
Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
+ + A EAM +L + AL ++A ++ ++ ++PQ
Sbjct: 255 ARSRKAPEAMLKLGASLNALGAREQACATLAELERKFPQ 293
Score = 38.2 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 16/83 (19%), Positives = 31/83 (37%), Gaps = 2/83 (2%)
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
A + E Y+ + +Y A R + + ++ +A L E Y+ EA E
Sbjct: 186 DAKADYEAAYAYVLQRQYEQAEMRLRQFIQSHPRDALVPDATYWLGETYLQRNRTREAAE 245
Query: 249 VVSLIQERYPQGYWARYVETLVK 271
+ Y + + E ++K
Sbjct: 246 QFLKVSTDYARSR--KAPEAMLK 266
>gi|85858722|ref|YP_460924.1| tol system periplasmic component [Syntrophus aciditrophicus SB]
gi|85721813|gb|ABC76756.1| tol system periplasmic component [Syntrophus aciditrophicus SB]
Length = 280
Score = 42.9 bits (98), Expect = 0.052, Method: Composition-based stats.
Identities = 27/250 (10%), Positives = 66/250 (26%), Gaps = 18/250 (7%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSS---RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76
K + ++ + G L+ ++ ++ + + + ++ A
Sbjct: 1 MKSFGLLAVAVGLVIFSGCATTKDLNRTQTDLNQKIEIVSEKVTAADSNIAVLRKDVDAA 60
Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
E + + + + Q + + + + G+ + + + L
Sbjct: 61 VEGLRKSQANMGADLSELREQVQQVRGQAESLRKEVGSLNGKAGKKDDENKEIREKLDQL 120
Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196
D+ +N K T R
Sbjct: 121 SQKVNFLETFLAIGDKNGHAAA-----------SNGTKAKDNVKAKTTSREDQ----YAA 165
Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
+ K G+Y A F+ L +++ A + E Y ++A + +
Sbjct: 166 AYSFFKEGKYEKARTEFENYLKANPKTSYSDNAQFWIGETYYFEKKYEKAILEYEKVIKN 225
Query: 257 YPQGYWARYV 266
YP G A
Sbjct: 226 YPDGNRAANA 235
Score = 40.5 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 20/120 (16%), Positives = 39/120 (32%), Gaps = 2/120 (1%)
Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
+ + + + + + A + IG Y +Y AI
Sbjct: 159 REDQYAAAYSFFKEGKYEKARTEFENYLKANPKTSYSDNA--QFWIGETYYFEKKYEKAI 216
Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
++ V+ NY D A A+ + ++ L AR + + + YP AR +
Sbjct: 217 LEYEKVIKNYPDGNRAANALFKQGLCFLMLEDKASARLIFQQVIKDYPNTSQARTARAKL 276
>gi|222054196|ref|YP_002536558.1| tol-pal system protein YbgF [Geobacter sp. FRC-32]
gi|221563485|gb|ACM19457.1| tol-pal system protein YbgF [Geobacter sp. FRC-32]
Length = 275
Score = 42.9 bits (98), Expect = 0.052, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 35/88 (39%)
Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243
+ A +G Y +Y AI FQ ++ NYS E AM + A+ L
Sbjct: 185 PKHDLAANVHYWLGETYYSEKKYDQAILEFQEIIKNYSGNEKIPAAMLKQAMAFKELGDA 244
Query: 244 DEAREVVSLIQERYPQGYWARYVETLVK 271
AR V + E YP AR + +K
Sbjct: 245 KSARYVYKKVAEDYPHTDEARIAKEKLK 272
Score = 35.9 bits (80), Expect = 6.2, Method: Composition-based stats.
Identities = 22/127 (17%), Positives = 46/127 (36%)
Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
G++ + + + +Y+K + L++ + K+ EY ++ FP +A
Sbjct: 134 GFDEFQKKMAEAKAAEAEQTPEALYQKGLETLRKGDPQKSREYLSRFLELFPKHDLAANV 193
Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
YS KY QA +E I Y ++ + M++ ++ K
Sbjct: 194 HYWLGETYYSEKKYDQAILEFQEIIKNYSGNEKIPAAMLKQAMAFKELGDAKSARYVYKK 253
Query: 157 LMLQYMS 163
+ Y
Sbjct: 254 VAEDYPH 260
>gi|325107034|ref|YP_004268102.1| hypothetical protein Plabr_0453 [Planctomyces brasiliensis DSM
5305]
gi|324967302|gb|ADY58080.1| hypothetical protein Plabr_0453 [Planctomyces brasiliensis DSM
5305]
Length = 351
Score = 42.9 bits (98), Expect = 0.053, Method: Composition-based stats.
Identities = 25/247 (10%), Positives = 61/247 (24%), Gaps = 24/247 (9%)
Query: 27 FFSIAVCFLVGWERQS---SRDVYLDSVTDVRYQREVYEKAVL-----FLKEQNFSKAYE 78
FF + + + S TD Y +A+ L N+++A
Sbjct: 117 FFIARSLAKLAFANNDRLVEAVTRMKSFTDRNADSFRYYEALDMLGQLQLASSNYAEAEA 176
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
F + + L + Q + + D
Sbjct: 177 AFTKIE----QSPFDDWKLSAKSSKARVQLAQGQIDQAISGFDSVINAPAKDDATKQRQL 232
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
+ + L ++ ++ + + + + + + G+
Sbjct: 233 EAMLGKASA-LNQKNQFDQSLTLLADVIAKIS-----EDNARLQAEAQVRRGTALLGQGK 286
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
++ F + EA+ L + + + A E ++ YP
Sbjct: 287 NQEALMAFLLVDILFSGQQD------YHAEALYHLNKLWPTVGQPGRAEEARGTLETEYP 340
Query: 259 QGYWARY 265
W +
Sbjct: 341 NSPWTKK 347
>gi|291288388|ref|YP_003505204.1| Tetratricopeptide TPR_2 repeat protein [Denitrovibrio acetiphilus
DSM 12809]
gi|290885548|gb|ADD69248.1| Tetratricopeptide TPR_2 repeat protein [Denitrovibrio acetiphilus
DSM 12809]
Length = 510
Score = 42.9 bits (98), Expect = 0.054, Method: Composition-based stats.
Identities = 24/210 (11%), Positives = 53/210 (25%), Gaps = 6/210 (2%)
Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
++ YE A+ + ++ +KA + + A L + +
Sbjct: 2 KQLDSKQAYELAMKYHQKGELAKAEQLYGAVLEVDRHNADAMHYLGLIHIANGKTESALE 61
Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD---VPYDQRATKLMLQYMSRIVERY 169
P N Y + + + + +
Sbjct: 62 LMKQAVSLDKTNPVFHNNLGEIYRQTGQFEHAEFHLSSAAELKPNYSDAFSNLGLLYKER 121
Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
K + + + G + G Y AI ++ L D A
Sbjct: 122 GLVNDAKYCFAEALQSDPKNLSALINTGNLFNSEGSYEDAIQCYEAALEISPD---NPNA 178
Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQ 259
+A AY + + + S + +P+
Sbjct: 179 LASAGAAYYKTGEYNTSAKYYSRLVNGHPE 208
>gi|71275794|ref|ZP_00652078.1| TPR repeat [Xylella fastidiosa Dixon]
gi|71900393|ref|ZP_00682526.1| TPR repeat [Xylella fastidiosa Ann-1]
gi|170730226|ref|YP_001775659.1| hypothetical protein Xfasm12_1070 [Xylella fastidiosa M12]
gi|71163372|gb|EAO13090.1| TPR repeat [Xylella fastidiosa Dixon]
gi|71729825|gb|EAO31923.1| TPR repeat [Xylella fastidiosa Ann-1]
gi|167965019|gb|ACA12029.1| conserved hypothetical protein [Xylella fastidiosa M12]
Length = 271
Score = 42.9 bits (98), Expect = 0.054, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 27/70 (38%), Gaps = 2/70 (2%)
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
K +Y A F L Y + + A+ L E+Y A+ A + RYP
Sbjct: 156 KNSKYADAAELFISFLQLYPNGVYTPNAIYWLGESYYAMHDFVSAEAQFRSLLSRYPTHD 215
Query: 262 WARYVETLVK 271
+ +L+K
Sbjct: 216 --KASGSLLK 223
Score = 38.2 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 22/234 (9%), Positives = 58/234 (24%), Gaps = 12/234 (5%)
Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
++ + D+R Q + ++ ++ + + L
Sbjct: 40 SDPQVNIDLINQINDLRSQIRQMQGSIEEMQHG-----------YEQLKQQSKDQYLDLD 88
Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
S + + P N + +
Sbjct: 89 SRLKPIESGSVREPSRVPANPISQVSPSHSNQPIAMSEQSPNVHGDASALTISNEERIAY 148
Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI-GRYYLKRGEYVAAIPRFQLVL 217
+ F + G Y ++V+A +F+ +L
Sbjct: 149 NVAFDALKNSKYADAAELFISFLQLYPNGVYTPNAIYWLGESYYAMHDFVSAEAQFRSLL 208
Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+ Y + A ++ + D+A+ + + +YP AR + ++
Sbjct: 209 SRYPTHDKASGSLLKEALCQANQGKNDDAQHSLEQVLSQYPGTDAARLAQERLQ 262
>gi|330446673|ref|ZP_08310325.1| type IV pilus biogenesis/stability protein PilW [Photobacterium
leiognathi subsp. mandapamensis svers.1.1.]
gi|328490864|dbj|GAA04822.1| type IV pilus biogenesis/stability protein PilW [Photobacterium
leiognathi subsp. mandapamensis svers.1.1.]
Length = 252
Score = 42.9 bits (98), Expect = 0.054, Method: Composition-based stats.
Identities = 29/241 (12%), Positives = 74/241 (30%), Gaps = 9/241 (3%)
Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
++ G D + + + + +LK+ + +A E
Sbjct: 9 LLSCLLFTGCATVEVADNGREFDPKAASEARL-NLGLNYLKDGQWERARE---NLELALK 64
Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
+ ++ A+ G A + ++ + P++ +V Y + S + +
Sbjct: 65 YDPTYYRAQNAMAYYYQKVGDKDAAEKMYKQALRYSPKNGDVLNNYGVFLCSEGRYDEAI 124
Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA-AKEVEIGRYYLKRGEYV 207
RA + Y+ K G + A A + R L+ +
Sbjct: 125 AAFVRAIEQPYYYLISASYENAGLCSRKQGNLEAATGYFENALAHDPNRPRSMLQLAQVE 184
Query: 208 AAIPRFQ----LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
F+ + + +++ L++ + +A + L++E+YP
Sbjct: 185 IETNNFKDARVQLFKFNKRYGYTADSLWLLIQLEKQAGRLTQANKYAILLKEKYPDSLQY 244
Query: 264 R 264
+
Sbjct: 245 Q 245
>gi|182415413|ref|YP_001820479.1| TPR repeat-containing protein [Opitutus terrae PB90-1]
gi|177842627|gb|ACB76879.1| Tetratricopeptide TPR_2 repeat protein [Opitutus terrae PB90-1]
Length = 345
Score = 42.9 bits (98), Expect = 0.054, Method: Composition-based stats.
Identities = 42/164 (25%), Positives = 72/164 (43%), Gaps = 1/164 (0%)
Query: 74 SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
S+A +YF + P++ A +L+ A A + ++A + I QYP+S
Sbjct: 162 SRAIDYFEIIVQTAPYSDYAPLALMNKARGHLRARETEEAIDALDRMINQYPQSLLAPDA 221
Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA-K 192
Y + ++A ++ YDQ +TK + Y + + N P V A + + LA K
Sbjct: 222 YLKLAQTHALLVEGPNYDQGSTKEAITYYEDFLILFPNDPNVPTAAKGLDEMKQVLAESK 281
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
Y+ KR Y AA + + +Y D+ A+ A +L E
Sbjct: 282 IRIGDFYFYKRDNYTAARVFYNEAITSYPDSPVAQRARTKLAEV 325
Score = 41.3 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 31/223 (13%), Positives = 67/223 (30%), Gaps = 29/223 (13%)
Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
+D + +A ++ + A + + ++ +P + A ++L S + + +Y
Sbjct: 51 SDAHNALNLMNRARELEEDGSRGAAIRRYKKVAKRYPASIYASEALYRSGKLYLARRQYF 110
Query: 112 QAASLGEEYITQYPESKNVDYVYYLV-------GMSYAQMIRDVPYDQRATKLMLQYMSR 164
++ E T+YP +K+ + V + Y
Sbjct: 111 RSFEAFMEVTTRYPNTKHFNDVIGEEYRIASALLDGARNRWWGWFPGFTNRSRAIDYFEI 170
Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
IV+ S Y + R +L+ E AI ++ Y +
Sbjct: 171 IVQTAPYSDYAP--------------LALMNKARGHLRARETEEAIDALDRMINQYPQSL 216
Query: 225 HAEEAMARLVEAY--------VALALMDEAREVVSLIQERYPQ 259
A +A +L + + EA +P
Sbjct: 217 LAPDAYLKLAQTHALLVEGPNYDQGSTKEAITYYEDFLILFPN 259
Score = 41.3 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 28/244 (11%), Positives = 63/244 (25%), Gaps = 18/244 (7%)
Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
+ V + +Y L+L + + +++E F + + +P + +
Sbjct: 80 KKVAKRYPASIYASEALYRSGKLYLARRQYFRSFEAFMEVTTRYPNTKHFNDVIGEE-YR 138
Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV--PYDQRATKLMLQY 161
SA + S+ +DY +V + + R +
Sbjct: 139 IASALLDGARNRWWGWFPGFTNRSRAIDYFEIIVQTAPYSDYAPLALMNKARGHLRARET 198
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
I + + + +G AI ++ L +
Sbjct: 199 EEAIDALDRMINQYPQSLLAPDAYLKLAQTHALLVEGPNYDQGSTKEAITYYEDFLILFP 258
Query: 222 DAEHAEEA-------MARLVEA--------YVALALMDEAREVVSLIQERYPQGYWARYV 266
+ + A L E+ + AR + YP A+
Sbjct: 259 NDPNVPTAAKGLDEMKQVLAESKIRIGDFYFYKRDNYTAARVFYNEAITSYPDSPVAQRA 318
Query: 267 ETLV 270
T +
Sbjct: 319 RTKL 322
Score = 35.9 bits (80), Expect = 6.0, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 30/78 (38%)
Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
A + R + G AAI R++ V Y + +A EA+ R + Y+A +
Sbjct: 54 HNALNLMNRARELEEDGSRGAAIRRYKKVAKRYPASIYASEALYRSGKLYLARRQYFRSF 113
Query: 248 EVVSLIQERYPQGYWARY 265
E + RYP
Sbjct: 114 EAFMEVTTRYPNTKHFND 131
>gi|148546496|ref|YP_001266598.1| Tol-Pal system, YbgF [Pseudomonas putida F1]
gi|148510554|gb|ABQ77414.1| Tol-Pal system, YbgF [Pseudomonas putida F1]
Length = 268
Score = 42.9 bits (98), Expect = 0.054, Method: Composition-based stats.
Identities = 16/111 (14%), Positives = 39/111 (35%), Gaps = 1/111 (0%)
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI-GRYYLKRGEYVAAIPRFQLVLANY 220
I ++ + + F +Q A G L +G+ A F V Y
Sbjct: 156 FDLIKQKDFDKASQAFSAFLRKYPNSQYAGNAQYWLGEVNLAKGDLQGASQAFAQVSQKY 215
Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+++ +L + + D+ + ++ + +YP A+ + ++
Sbjct: 216 PKHSKVPDSLYKLADVERRMGHTDKVKGILQQVVTQYPGTSAAQLAQRDLQ 266
Score = 39.8 bits (90), Expect = 0.37, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 32/78 (41%), Gaps = 1/78 (1%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ +K+ ++ A F L Y ++++A A L E +A + A + +
Sbjct: 151 YYDAAFDLIKQKDFDKASQAFSAFLRKYPNSQYAGNAQYWLGEVNLAKGDLQGASQAFAQ 210
Query: 253 IQERYPQ-GYWARYVETL 269
+ ++YP+ + L
Sbjct: 211 VSQKYPKHSKVPDSLYKL 228
Score = 38.2 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 35/84 (41%)
Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
D ++ Y+ A +K+++F KA + F+ R +P + A + V + G
Sbjct: 140 SQPGDPAKEKLYYDAAFDLIKQKDFDKASQAFSAFLRKYPNSQYAGNAQYWLGEVNLAKG 199
Query: 109 KYQQAASLGEEYITQYPESKNVDY 132
Q A+ + +YP+ V
Sbjct: 200 DLQGASQAFAQVSQKYPKHSKVPD 223
>gi|16753067|ref|NP_444631.1| hypothetical protein CP0079 [Chlamydophila pneumoniae AR39]
gi|8163361|gb|AAF73626.1| conserved hypothetical protein [Chlamydophila pneumoniae AR39]
Length = 318
Score = 42.9 bits (98), Expect = 0.055, Method: Composition-based stats.
Identities = 24/189 (12%), Positives = 59/189 (31%), Gaps = 5/189 (2%)
Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
E + + FLK+ NF KA F + FP + ++ + ++ A
Sbjct: 42 SAEEYFSQGQEFLKKGNFRKALLCFGIITHHFPRDILRNQAQYLIGVCYFTQDHPDLADK 101
Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
Y+ + + ++ + +R L+ +++ ++ +
Sbjct: 102 AFASYLQLPDAEYSEELFQMKYAIA-----QRFAQGKRKRICRLEGFPKLMNADEDALRI 156
Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
++ A + + + A + + + + EA RL E
Sbjct: 157 YDEILTAFPSKDLGAQALYSKAALLIVKNDLTEATKTLKKLTLQFPLHILSSEAFVRLSE 216
Query: 236 AYVALALMD 244
Y+ A +
Sbjct: 217 IYLQQAKKE 225
>gi|121604949|ref|YP_982278.1| hypothetical protein Pnap_2048 [Polaromonas naphthalenivorans CJ2]
gi|120593918|gb|ABM37357.1| Tetratricopeptide TPR_2 repeat protein [Polaromonas
naphthalenivorans CJ2]
Length = 253
Score = 42.9 bits (98), Expect = 0.055, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 30/77 (38%)
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+ +Y +A+ F+ V + + A EA+ + V L AR+ + +
Sbjct: 173 FWLANAQYALRDYKSAVNNFRTVASADPEHVRAPEALLSMANCQVELKDAKSARKTLEEL 232
Query: 254 QERYPQGYWARYVETLV 270
+ YPQ A + +
Sbjct: 233 VKTYPQSEAASVAKERL 249
>gi|302391014|ref|YP_003826834.1| SpoIID/LytB domain protein [Acetohalobium arabaticum DSM 5501]
gi|302203091|gb|ADL11769.1| SpoIID/LytB domain protein [Acetohalobium arabaticum DSM 5501]
Length = 708
Score = 42.9 bits (98), Expect = 0.055, Method: Composition-based stats.
Identities = 26/244 (10%), Positives = 65/244 (26%), Gaps = 10/244 (4%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
K L + + + + + ++ EKA + ++ +
Sbjct: 6 KKLYLLVIGVVFCLVTFTVTFVFKAENHDITTAKQHNLDKLEEKARTEYYNGAYRESIKL 65
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG------EEYITQYPESKNVDYV 133
+ + RK+L + E +
Sbjct: 66 YQEVLEKSSARIDTRKNLAVVYETVGDYKSAVNQYEAVLSTDSDEHSVYYDLGELYYSLG 125
Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
Y + + + ++ KL +++I + ++ A A
Sbjct: 126 KYNQALKNTKQAVEYIENEAILKLAYLKLAQIHKERSDYHLALSAVKQALKLDPDSAVAY 185
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE-VVSL 252
G+ + + A+ ++ L D EA L + Y L EA++ +
Sbjct: 186 YYSGQIKDRLDQLQEAVADYKQALNK--DGSFV-EAQLDLADDYFKLEKYKEAKKLYKKI 242
Query: 253 IQER 256
++
Sbjct: 243 LERN 246
>gi|258516065|ref|YP_003192287.1| hypothetical protein Dtox_2903 [Desulfotomaculum acetoxidans DSM
771]
gi|257779770|gb|ACV63664.1| hypothetical protein Dtox_2903 [Desulfotomaculum acetoxidans DSM
771]
Length = 887
Score = 42.9 bits (98), Expect = 0.055, Method: Composition-based stats.
Identities = 30/268 (11%), Positives = 68/268 (25%), Gaps = 48/268 (17%)
Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF- 102
+++ L+ + Y AV ++ +++ +A + + + L F
Sbjct: 499 KELSLEKLDPALQAFINYSLAVREIRREDYPRAASQLEEFLKQEENLATDKHILPFDNFL 558
Query: 103 --------------------------VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
+ +L N +
Sbjct: 559 GNEQYDFHGAVKKQLDEVNKLDNLKSQWEKSKTTIDLYNLAAAIFHNQMLYYNHLWAGQR 618
Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196
++ + I A M +M ++ + PY + + A
Sbjct: 619 QYYNWLEYITYQMGRGHAPVEMAAFMREMINYNHSLPYFQQVYLDPSSSPELKAKALYST 678
Query: 197 GRYYLKRGEYVAA--------------IPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242
G Y ++ I +Q + Y D+ A++A+ L
Sbjct: 679 GLCYTGLHDWGEDAAFAFNSLDTRKKIISTYQQFVEEYPDSSMADDALLALGSYTGNTG- 737
Query: 243 MDEAREVVSLIQERYPQGYWARYVETLV 270
+ I + YP G + L+
Sbjct: 738 ------YLQKIIKEYPDGDMLEKAKKLM 759
>gi|189500638|ref|YP_001960108.1| tol-pal system protein YbgF [Chlorobium phaeobacteroides BS1]
gi|189496079|gb|ACE04627.1| tol-pal system protein YbgF [Chlorobium phaeobacteroides BS1]
Length = 267
Score = 42.9 bits (98), Expect = 0.055, Method: Composition-based stats.
Identities = 26/260 (10%), Positives = 75/260 (28%), Gaps = 7/260 (2%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVY--EKAVLFLKEQNFSKA 76
+ K ++ I + G ++ + D V +++ Q + +A + + +
Sbjct: 8 MNKTVTSVLCGILLVTSAGCASKTDLYMLQDDVKELKTQSQKSGGHQAEVSSEVERLRGE 67
Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
+ + A + + S+ Q P+ +
Sbjct: 68 VAQLQGTIEELRYKLSASEEGNVPGESGASSPSESQQPGSSVIEKVTLPDEVTPETAADT 127
Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196
G++ + + Y + + + ++ +
Sbjct: 128 AGVAPGSASAEAVPSSAPAIDDQGLYKAGKTFFDGYKYPSARKEFGLLLDTYPSSAFADD 187
Query: 197 GRYYLKRGEYVAAIPR-----FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
+YY+ + +QLV+ Y + A + ++ + A+
Sbjct: 188 AQYYIAETYFNEKWFEKAILEYQLVIEKYPKGDKRPAAYFKQGLSFENIGDTTNAKVRYR 247
Query: 252 LIQERYPQGYWARYVETLVK 271
+ + YP+ AR V + ++
Sbjct: 248 ELVQLYPESNEARIVNSKMQ 267
>gi|86359051|ref|YP_470943.1| hypothetical protein RHE_CH03460 [Rhizobium etli CFN 42]
gi|86283153|gb|ABC92216.1| hypothetical conserved protein [Rhizobium etli CFN 42]
Length = 249
Score = 42.9 bits (98), Expect = 0.056, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 32/79 (40%), Gaps = 2/79 (2%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ + ++ G+Y A F +A Y + A +A L EA + +EA +
Sbjct: 128 QYKAAYGHVLSGDYGTAEEEFNQYIARYPSSARAADANFWLGEALYSQGKYNEAAKTFLN 187
Query: 253 IQERYPQGYWARYVETLVK 271
++Y + E L+K
Sbjct: 188 AHQKYGSSE--KAPEMLLK 204
Score = 37.5 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 17/76 (22%), Positives = 30/76 (39%)
Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243
+ A +G +G+Y A F Y +E A E + +L + AL
Sbjct: 156 PSSARAADANFWLGEALYSQGKYNEAAKTFLNAHQKYGSSEKAPEMLLKLGMSLAALDNK 215
Query: 244 DEAREVVSLIQERYPQ 259
+ A + + +RYP+
Sbjct: 216 ETACATLREVSKRYPK 231
>gi|75909260|ref|YP_323556.1| lytic transglycosylase catalytic subunit [Anabaena variabilis ATCC
29413]
gi|75702985|gb|ABA22661.1| Lytic transglycosylase, catalytic [Anabaena variabilis ATCC 29413]
Length = 731
Score = 42.9 bits (98), Expect = 0.056, Method: Composition-based stats.
Identities = 23/221 (10%), Positives = 62/221 (28%), Gaps = 4/221 (1%)
Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS-AGKYQQ 112
++ + + F KA + + + + + + Y+Q
Sbjct: 228 NLQPQDWEVIGTAYWENNQFLKAANAYAKAPKTARNLYRTARGWQVGGKNREQAISTYKQ 287
Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
+ + + + + + + L + I+ +
Sbjct: 288 LVQQFPDARETGLGLVRLAEMTKTNKDALPYLNQVIAKFPEQASQALVKKAEILTALKDE 347
Query: 173 PYVKGARFYVTVGRNQL---AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
+ + + A + K +Y +A Q ++ N ++ A A
Sbjct: 348 KAAQQTWQQLITKYAKSDEAAEYRWKNALEKAKARDYTSAWKWAQPIVINNPNSILAPRA 407
Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
L + A+ EA+ + ++P Y+A L+
Sbjct: 408 GFWLGKWAAAVGKQQEAQTAYEYVISQFPYSYYAWRSANLL 448
>gi|94987465|ref|YP_595398.1| N-acetylmuramoyl-L-alanine amidase [Lawsonia intracellularis
PHE/MN1-00]
gi|94731714|emb|CAJ55077.1| N-acetylmuramoyl-L-alanine amidase [Lawsonia intracellularis
PHE/MN1-00]
Length = 600
Score = 42.5 bits (97), Expect = 0.056, Method: Composition-based stats.
Identities = 15/86 (17%), Positives = 33/86 (38%), Gaps = 1/86 (1%)
Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY-VALALMDE 245
A E+ ++ + AI +Q V+ Y E A+ + + Y L ++
Sbjct: 100 YYSAVALDELAKHSFTVSDAEKAIKCYQSVITKYPKRTITESALLNIAKVYAERLHKPND 159
Query: 246 AREVVSLIQERYPQGYWARYVETLVK 271
A++ + + YP+ + +K
Sbjct: 160 AKKYLQKLLTDYPKSDKINEAQIYLK 185
>gi|28897836|ref|NP_797441.1| hypothetical protein VP1062 [Vibrio parahaemolyticus RIMD 2210633]
gi|260361767|ref|ZP_05774792.1| tetratricopeptide repeat protein [Vibrio parahaemolyticus K5030]
gi|260876996|ref|ZP_05889351.1| tetratricopeptide repeat protein [Vibrio parahaemolyticus AN-5034]
gi|260899067|ref|ZP_05907508.1| tetratricopeptide repeat protein [Vibrio parahaemolyticus Peru-466]
gi|28806049|dbj|BAC59325.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD
2210633]
gi|308089158|gb|EFO38853.1| tetratricopeptide repeat protein [Vibrio parahaemolyticus Peru-466]
gi|308093912|gb|EFO43607.1| tetratricopeptide repeat protein [Vibrio parahaemolyticus AN-5034]
gi|308113270|gb|EFO50810.1| tetratricopeptide repeat protein [Vibrio parahaemolyticus K5030]
Length = 251
Score = 42.5 bits (97), Expect = 0.056, Method: Composition-based stats.
Identities = 12/93 (12%), Positives = 31/93 (33%)
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
+F + +A + + + +Y D+ +A+ +L E
Sbjct: 159 QFQKDYPDSTYSANSHYWLGQLYFAKKQDKDAVKSFAAVVSYKDSNKRADALLKLGEIAE 218
Query: 239 ALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+A++ + + YP A+ + +K
Sbjct: 219 RNNNAAQAKKYYQQVVDEYPGSASAKLAGSKLK 251
>gi|291224727|ref|XP_002732355.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 1215
Score = 42.5 bits (97), Expect = 0.057, Method: Composition-based stats.
Identities = 29/225 (12%), Positives = 75/225 (33%), Gaps = 21/225 (9%)
Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
+ + E+ +KA LKE+ F++A F++ +P + K+ A
Sbjct: 786 EPNQIKTDEKKESFEEI-KKAEDLLKEKKFAEALRSFDKVLTKWPDSS---KAHYGKAKS 841
Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
+++ L ++ I Y ++ N + + Q + ++ +Q +
Sbjct: 842 LDQLADERRSNKLLQDSIQSYQDTANAADCSVEMKKAALQRQANRLQFLGKSRKAVQVYN 901
Query: 164 RIVERYT-----------------NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
++ + ++ + A + V +G + +Y
Sbjct: 902 QLYRLFPEDLEILQELGVANLILGDNDKGQQAFEKMLKLNPNSGFAMVHLGFILKAKTDY 961
Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
A+P + + + + L +A L +EA ++ +
Sbjct: 962 EGAVPLLKKGIESKEKGTDEGKFYFHLGDALYRLGRENEAYDIYA 1006
>gi|255530909|ref|YP_003091281.1| RagB/SusD domain-containing protein [Pedobacter heparinus DSM 2366]
gi|255343893|gb|ACU03219.1| RagB/SusD domain protein [Pedobacter heparinus DSM 2366]
Length = 544
Score = 42.5 bits (97), Expect = 0.057, Method: Composition-based stats.
Identities = 19/252 (7%), Positives = 50/252 (19%), Gaps = 18/252 (7%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE--KAVLFLKEQNFSKA 76
+ +T+ ++ + + +D +S ++ +Y+ + +A
Sbjct: 1 MKALTITLQLALTISLISSCS----KDTLNESSPNILLADNLYKDKAGFDAGLNGLYDEA 56
Query: 77 YEY-----FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
+ + + + + + Y +
Sbjct: 57 RRSRSGSTYGGSTNLMLEPAFIGVDNAYGNYEDTYEKVFNSWGANNNASVIHYRYVWSWL 116
Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKL---MLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
Y + K R +
Sbjct: 117 YETINAANTIINRAGQPNSLTETEKNQVLAEARFFRGWAYRHLIYLWGDVPLTLEESSGT 176
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLV----LANYSDAEHAEEAMARLVEAYVALALMD 244
+ + R A + A L E Y+A D
Sbjct: 177 NIRTDWQRTPVAEVRAAIEADWLFAEQFLPELSAANPGKVLKGAVQHYLAELYLAEGKND 236
Query: 245 EAREVVSLIQER 256
+AR+ +
Sbjct: 237 KARDYALKVTTN 248
>gi|299529323|ref|ZP_07042762.1| hypothetical protein CTS44_01083 [Comamonas testosteroni S44]
gi|298722701|gb|EFI63619.1| hypothetical protein CTS44_01083 [Comamonas testosteroni S44]
Length = 253
Score = 42.5 bits (97), Expect = 0.057, Method: Composition-based stats.
Identities = 22/122 (18%), Positives = 40/122 (32%), Gaps = 14/122 (11%)
Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
+ Q + + ++ S Y RF++ G +Y
Sbjct: 142 MFRSGKFPEAGQAFAAFLRQWPKSGYTPSVRFWL--------------GNSQYATRDYKN 187
Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
AI F+ V+ N A EA + V L AR+ + + + YP A ++
Sbjct: 188 AIANFRSVMTNAPMHARAPEAALSIANCLVELKDTKAARKTLEELLQAYPNSEAAGIAKS 247
Query: 269 LV 270
+
Sbjct: 248 KL 249
>gi|187735051|ref|YP_001877163.1| Tetratricopeptide TPR_2 repeat protein [Akkermansia muciniphila
ATCC BAA-835]
gi|187425103|gb|ACD04382.1| Tetratricopeptide TPR_2 repeat protein [Akkermansia muciniphila
ATCC BAA-835]
Length = 1077
Score = 42.5 bits (97), Expect = 0.057, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 24/58 (41%)
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
Y A+P + + Y D+ + + AM L E Y L DEA + R+P
Sbjct: 471 DASRYKEAVPVLERFVKEYRDSTYLKTAMYLLGETYTNLGNTDEAIRSFTNYIARFPD 528
Score = 38.2 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 21/102 (20%), Positives = 38/102 (37%)
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
S ++R + + G+ A +G L G A +QL+ +Y
Sbjct: 312 FSHTLDRAKVTALIDQFNKMKEEGKVMDAFTFSFMGNQALVHGSQRVARAAYQLINESYP 371
Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
DA E+ + L L D+ E+V+ + +P +A
Sbjct: 372 DAPGREDNLYYLAMTTWQLGEADKGGELVAQHLKEFPNSKYA 413
Score = 38.2 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 36/225 (16%), Positives = 68/225 (30%), Gaps = 19/225 (8%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
+ +Y A+ + K E Q ++FP + A +S K+
Sbjct: 371 PDAPGREDNLYYLAMTTWQLGEADKGGELVAQHLKEFPNSKYAPMLNTLSLEGLLKEKKF 430
Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
++ + + + + + A + D K + + R V+ Y
Sbjct: 431 DLCVQQADKVMELHKDDPTHKFYELALYCKGASLFNLGAADASRYKEAVPVLERFVKEYR 490
Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
+S Y+K A + + G Y G AI F +A + D A A
Sbjct: 491 DSTYLKTAMYLL--------------GETYTNLGNTDEAIRSFTNYIARFPDKGEANMAA 536
Query: 231 ARLVEAYVAL-----ALMDEAREVVSLIQERYPQGYWARYVETLV 270
A+ L + A + I + + Y L+
Sbjct: 537 VLYDRAFNYLNRKNPGDEELAAKDAKEIVDNFKDHRLFPYANNLL 581
>gi|154339850|ref|XP_001565882.1| intraflagellar transport protein IFT88 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 810
Score = 42.5 bits (97), Expect = 0.057, Method: Composition-based stats.
Identities = 26/217 (11%), Positives = 63/217 (29%), Gaps = 6/217 (2%)
Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
++ + +Y + K + +A F + + + +
Sbjct: 495 KAKELYNKALAVEADNVEAIYNLGLAAKKLGLYEEAVRTFKRM-QALVDSNEVLYQIADL 553
Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
+ + + L T + +Y G + + M
Sbjct: 554 SDLVGDPSALEWFNRLIGRVPTDPNALARIGSLYARDGDDVQAFHYYLEAYRYYQVNMDV 613
Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE--IGRYYLKRGEYVAAIPRFQLVLA 218
N Y + +F+ Q + + + + +RG+YV A ++ +
Sbjct: 614 ISWLGAYFVKNEVYDRAVQFFERASHIQPQEVKWQLMVASCHRRRGDYVQAKRLYEQLHR 673
Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
Y D E + L++ L +EA E +++
Sbjct: 674 KYPD---NVECLNYLMQLCKDAGLNEEANEWFKTMKK 707
Score = 38.6 bits (87), Expect = 0.82, Method: Composition-based stats.
Identities = 25/221 (11%), Positives = 62/221 (28%), Gaps = 4/221 (1%)
Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
+ L + + + K ++++ KA E +N+ A +L ++
Sbjct: 461 SGEQYSDLSLGANQYNAKALVNKGNFSFVKKDYDKAKELYNKALAVEADNVEAIYNLGLA 520
Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK-LML 159
A + + + + + + LVG A + + T L
Sbjct: 521 AKKLGLYEEAVRTFKRMQALVDSNEVLYQIADLSDLVGDPSALEWFNRLIGRVPTDPNAL 580
Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219
+ + R + +G Y++K Y A+ F+
Sbjct: 581 ARIGSLYARDGDDVQAFHYYLEAYRYYQVNMDVISWLGAYFVKNEVYDRAVQFFERASHI 640
Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
+ + + +A+ + + +YP
Sbjct: 641 QPQEVKWQ---LMVASCHRRRGDYVQAKRLYEQLHRKYPDN 678
>gi|94969718|ref|YP_591766.1| lytic transglycosylase, catalytic [Candidatus Koribacter versatilis
Ellin345]
gi|94551768|gb|ABF41692.1| Lytic transglycosylase, catalytic [Candidatus Koribacter versatilis
Ellin345]
Length = 798
Score = 42.5 bits (97), Expect = 0.057, Method: Composition-based stats.
Identities = 28/222 (12%), Positives = 58/222 (26%), Gaps = 13/222 (5%)
Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ----------YSAGKYQQ 112
+A L LK + +++A + + ++ + Y
Sbjct: 290 RADLLLKGKQYTQAAADYRGLMDVVSGDRRSEVLANLAVSLMKSGATRDAQKYLDQIPAT 349
Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
AA+ SY +R + L + +
Sbjct: 350 AAAEINGQKLYNEMMIARHNNDSDRVASYLSQLRQQASTSSFFQEALFEAGNMYMLQHDY 409
Query: 173 PYVKGARFYVTVGRN---QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
+ + + A + L++G AA+ F+ L Y A
Sbjct: 410 DHSIDCYREIHERFPEGPRAAYAHWRASWFDLRQGRTDAALREFREQLEKYPSTTEVTAA 469
Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
M + AR + + +RY Y+A ++
Sbjct: 470 MYWEARLLEEKGNLPAARAWYAKLSDRYRNYYYAILARERLR 511
>gi|169633340|ref|YP_001707076.1| hypothetical protein ABSDF1691 [Acinetobacter baumannii SDF]
gi|169795692|ref|YP_001713485.1| hypothetical protein ABAYE1588 [Acinetobacter baumannii AYE]
gi|184158407|ref|YP_001846746.1| hypothetical protein ACICU_02087 [Acinetobacter baumannii ACICU]
gi|213158363|ref|YP_002319661.1| hypothetical protein AB57_2309 [Acinetobacter baumannii AB0057]
gi|215483178|ref|YP_002325385.1| hypothetical protein ABBFA_001482 [Acinetobacter baumannii
AB307-0294]
gi|301348116|ref|ZP_07228857.1| hypothetical protein AbauAB0_17761 [Acinetobacter baumannii AB056]
gi|301512101|ref|ZP_07237338.1| hypothetical protein AbauAB05_10987 [Acinetobacter baumannii AB058]
gi|301597368|ref|ZP_07242376.1| hypothetical protein AbauAB059_16161 [Acinetobacter baumannii
AB059]
gi|332852510|ref|ZP_08434249.1| hypothetical protein HMPREF0021_01824 [Acinetobacter baumannii
6013150]
gi|332871286|ref|ZP_08439835.1| hypothetical protein HMPREF0020_03490 [Acinetobacter baumannii
6013113]
gi|332873898|ref|ZP_08441838.1| hypothetical protein HMPREF0022_01450 [Acinetobacter baumannii
6014059]
gi|169148619|emb|CAM86485.1| conserved hypothetical protein; putative exported protein
[Acinetobacter baumannii AYE]
gi|169152132|emb|CAP01031.1| conserved hypothetical protein; putative exported protein
[Acinetobacter baumannii]
gi|183210001|gb|ACC57399.1| uncharacterized protein conserved in bacteria [Acinetobacter
baumannii ACICU]
gi|213057523|gb|ACJ42425.1| hypothetical protein AB57_2309 [Acinetobacter baumannii AB0057]
gi|213989047|gb|ACJ59346.1| hypothetical protein ABBFA_001482 [Acinetobacter baumannii
AB307-0294]
gi|322508731|gb|ADX04185.1| putative exported protein [Acinetobacter baumannii 1656-2]
gi|323518336|gb|ADX92717.1| hypothetical protein ABTW07_2293 [Acinetobacter baumannii
TCDC-AB0715]
gi|332729212|gb|EGJ60555.1| hypothetical protein HMPREF0021_01824 [Acinetobacter baumannii
6013150]
gi|332731570|gb|EGJ62856.1| hypothetical protein HMPREF0020_03490 [Acinetobacter baumannii
6013113]
gi|332737884|gb|EGJ68771.1| hypothetical protein HMPREF0022_01450 [Acinetobacter baumannii
6014059]
Length = 294
Score = 42.5 bits (97), Expect = 0.058, Method: Composition-based stats.
Identities = 18/114 (15%), Positives = 38/114 (33%), Gaps = 13/114 (11%)
Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
K + M ++ + NS Y A F++ Y A + +
Sbjct: 193 KKAIAPMQNFIKNHPNSIYTGNAYFWLAEF------------HLATDPVNYNEAKKNYNV 240
Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMD-EAREVVSLIQERYPQGYWARYVET 268
V Y ++ A A+ +L + A + + + +YP+ A++
Sbjct: 241 VANQYPNSSKAPRALYQLYSIAKDVDKNTVSANQYKNKLLSQYPKSEEAKFFNK 294
Score = 37.1 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA--LMDEAREVVSLIQERYP 258
K+G AI Q + N+ ++ + A L E ++A +EA++ +++ +YP
Sbjct: 187 YKQGGAKKAIAPMQNFIKNHPNSIYTGNAYFWLAEFHLATDPVNYNEAKKNYNVVANQYP 246
Query: 259 QG 260
Sbjct: 247 NS 248
>gi|149178735|ref|ZP_01857318.1| hypothetical protein PM8797T_01479 [Planctomyces maris DSM 8797]
gi|148842433|gb|EDL56813.1| hypothetical protein PM8797T_01479 [Planctomyces maris DSM 8797]
Length = 867
Score = 42.5 bits (97), Expect = 0.058, Method: Composition-based stats.
Identities = 20/212 (9%), Positives = 51/212 (24%), Gaps = 6/212 (2%)
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
+ + + E+ A + ++ + ++ +
Sbjct: 628 FHQGKIAESEKQSETAEDAPEGQITGSRQNRYYEEATRRLTEYVKRYPESEKISEARYLL 687
Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
+ + L + + + ++
Sbjct: 688 ARSLQNLSDQPLREMKEARTDNARQELKRKQFGYLNQALTQLQYL---NRDLRQLENRDR 744
Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
+G+ L + EY AI + + Y A ++ Y AL
Sbjct: 745 LDALGKQLLKSSCFGKAHILYLTEEYAEAIKSYHDAVNRYPQCTEVLIAYMKMSGCYEAL 804
Query: 241 ALMDEAR---EVVSLIQERYPQGYWARYVETL 269
+EA+ E +I ++ P + L
Sbjct: 805 GKKNEAKSMLEQAKIILKQMPDSVFESGATNL 836
>gi|119505390|ref|ZP_01627464.1| tfp pilus assembly protein PilF [marine gamma proteobacterium
HTCC2080]
gi|119458845|gb|EAW39946.1| tfp pilus assembly protein PilF [marine gamma proteobacterium
HTCC2080]
Length = 257
Score = 42.5 bits (97), Expect = 0.058, Method: Composition-based stats.
Identities = 25/250 (10%), Positives = 60/250 (24%), Gaps = 8/250 (3%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ L IF AVC L ++ + +R V E A ++ ++ A
Sbjct: 1 MKSVTLGIFAMAAVCLLSSCVTETVGGTDNEGDPQAALERRV-ELARQYIGRGDWENAKR 59
Query: 79 YFNQCSRDFPFAGVARK-----SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
+ + + + + + + + + ++
Sbjct: 60 NLELANNIDSDNPSVHEAFGLVYQSTGEYDRAEDSFKRALRIDPKFSRARNNYAAFLFFL 119
Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
++ L + N+ + A +
Sbjct: 120 GRYDEAEPEFVLVAEDSLYSGRPLAYINLGMSRLNLQNNAGAEDAFSRALRMDRRNPIAL 179
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+E+G L G+ A + + + +E A D +
Sbjct: 180 LEMGYLRLAAGDVAGAQSYYGVYRTVVPR--QSPRGFMLGIEVSRASGDKDAQSSYELAL 237
Query: 254 QERYPQGYWA 263
+ YP
Sbjct: 238 RNLYPDSQEY 247
>gi|306991541|pdb|2XEV|A Chain A, Crystal Structure Of The Tpr Domain Of Xanthomonas
Campestris Ybgf
gi|306991542|pdb|2XEV|B Chain B, Crystal Structure Of The Tpr Domain Of Xanthomonas
Campestris Ybgf
gi|306991543|pdb|2XEV|C Chain C, Crystal Structure Of The Tpr Domain Of Xanthomonas
Campestris Ybgf
Length = 129
Score = 42.5 bits (97), Expect = 0.058, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 30/83 (36%), Gaps = 2/83 (2%)
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
+A + LK G+Y A F L Y + + A+ L E+Y A A
Sbjct: 1 MARTAYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEA 60
Query: 249 VVSLIQERYPQGYWARYVETLVK 271
+ RYP + L+K
Sbjct: 61 QFRDLVSRYPTHD--KAAGGLLK 81
Score = 40.5 bits (92), Expect = 0.25, Method: Composition-based stats.
Identities = 19/117 (16%), Positives = 41/117 (35%), Gaps = 14/117 (11%)
Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
Q +E Y N Y A +++ G Y + A +F+
Sbjct: 18 YDDASQLFLSFLELYPNGVYTPNALYWL--------------GESYYATRNFQLAEAQFR 63
Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+++ Y + A + +L + EA++ + + +YP AR + ++
Sbjct: 64 DLVSRYPTHDKAAGGLLKLGLSQYGEGKNTEAQQTLQQVATQYPGSDAARVAQERLQ 120
Score = 35.2 bits (78), Expect = 9.4, Method: Composition-based stats.
Identities = 14/71 (19%), Positives = 25/71 (35%)
Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
R Y A LK + A + F +P +L Y+ +Q A +
Sbjct: 2 ARTAYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQ 61
Query: 117 GEEYITQYPES 127
+ +++YP
Sbjct: 62 FRDLVSRYPTH 72
>gi|149176885|ref|ZP_01855495.1| hypothetical protein PM8797T_14082 [Planctomyces maris DSM 8797]
gi|148844322|gb|EDL58675.1| hypothetical protein PM8797T_14082 [Planctomyces maris DSM 8797]
Length = 348
Score = 42.5 bits (97), Expect = 0.058, Method: Composition-based stats.
Identities = 23/206 (11%), Positives = 55/206 (26%), Gaps = 18/206 (8%)
Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
L ++++ A F R + + + T
Sbjct: 159 GESQLAKKDYVAANSAFGTVER----SPWKDYQMDAKNMKARVLLAQGNTKGALAAFETV 214
Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
+ + ++ + I++ ++S
Sbjct: 215 AKMDGKTPGE-LANKHAAQLGSAICLEKDGKPQDAIKVLDEIIKNVSSSQ---------- 263
Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA-EEAMARLVEAYVALAL 242
+ LA ++ G Y GE A+ + V + EA+ L + +
Sbjct: 264 --SSLLAEAYLKKGDCYQALGESKEALIAYLHVDVLFPSEPAVHAEALYHLSTLWGKVQK 321
Query: 243 MDEAREVVSLIQERYPQGYWARYVET 268
+ E +++Q++YP W +
Sbjct: 322 PERGNEARAVLQQQYPDSEWTQKATK 347
>gi|94501765|ref|ZP_01308278.1| hypothetical protein RED65_07514 [Oceanobacter sp. RED65]
gi|94426073|gb|EAT11068.1| hypothetical protein RED65_07514 [Oceanobacter sp. RED65]
Length = 947
Score = 42.5 bits (97), Expect = 0.058, Method: Composition-based stats.
Identities = 14/122 (11%), Positives = 40/122 (32%)
Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
+ + ++++ + + + ++ + G Y
Sbjct: 41 DFKNLDHDDVRGEYEQLIDLVDDEYLKEQIERRIAGVNMAQGDDKISKPGTAPEAGYYRR 100
Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
AI + +L Y ++ E + +L +AY AR+++ + +R+P
Sbjct: 101 AIASYVDILEKYPNSPDNAEVLYQLAKAYDMEGQPKNARKMLERLVDRHPYYERISEAYF 160
Query: 269 LV 270
+
Sbjct: 161 RL 162
>gi|300692235|ref|YP_003753230.1| associated to Tol-Pal complex protein (ygcF) [Ralstonia
solanacearum PSI07]
gi|299079295|emb|CBJ51967.1| putative associated to Tol-Pal complex protein (ygcF) [Ralstonia
solanacearum PSI07]
Length = 274
Score = 42.5 bits (97), Expect = 0.059, Method: Composition-based stats.
Identities = 16/126 (12%), Positives = 39/126 (30%), Gaps = 2/126 (1%)
Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
P ++ L+ + + + + Y LA + +G + +
Sbjct: 148 MVQPGEKTEYDAALKTFQSGDFKGAGNQFSAFVKKYPQSPYLPLA--QFWLGNALYAQRD 205
Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
Y + + + A EA+ ++ AR+ + + YP A+
Sbjct: 206 YKGSTYVLENMARANPQHPKAPEALLQIATNQGESGQKAAARKTLEAVVAEYPGTEQAKT 265
Query: 266 VETLVK 271
+ +K
Sbjct: 266 ASSRLK 271
>gi|218674236|ref|ZP_03523905.1| hypothetical protein RetlG_23392 [Rhizobium etli GR56]
Length = 329
Score = 42.5 bits (97), Expect = 0.059, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 32/79 (40%), Gaps = 2/79 (2%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ + ++ G+Y A F +A Y + A +A L EA + +EA +
Sbjct: 208 QYKAAYGHVLSGDYGTAEQEFNQYIARYPSSARAADANFWLGEALYSQGKYNEAAKTFLN 267
Query: 253 IQERYPQGYWARYVETLVK 271
++Y + E L+K
Sbjct: 268 AHQKYGGSE--KAPEMLLK 284
Score = 38.2 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 17/76 (22%), Positives = 30/76 (39%)
Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243
+ A +G +G+Y A F Y +E A E + +L + AL
Sbjct: 236 PSSARAADANFWLGEALYSQGKYNEAAKTFLNAHQKYGGSEKAPEMLLKLGMSLAALDNK 295
Query: 244 DEAREVVSLIQERYPQ 259
+ A + + +RYP+
Sbjct: 296 ETACATLREVSKRYPK 311
>gi|206602344|gb|EDZ38825.1| putative TPR domain-containing protein [Leptospirillum sp. Group II
'5-way CG']
Length = 254
Score = 42.5 bits (97), Expect = 0.059, Method: Composition-based stats.
Identities = 21/253 (8%), Positives = 51/253 (20%), Gaps = 11/253 (4%)
Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
F + + + G S + E Y + L AY F
Sbjct: 7 LFRHFFLFMTLFLVSGCASSVS-------PRNHHLALEHYMSGLRNLGVGKLQDAYWDFE 59
Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
+ P +L + + + + T +
Sbjct: 60 YAAHLDPTMKKVHYALG-HVYYRMHDFQDAKKEFRLSMQGTVRVAAAYNYLGLIAYKQRQ 118
Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
+ L +V + + ++ ++
Sbjct: 119 YHRAIRYFKKSLSDPLYKTPEHPLVNMGRTYIALNKPEKARETFSLAILRNSNDVAAHFW 178
Query: 202 KRGEYVAAIPR---FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
+ + + A + L Y+ L ++A + P
Sbjct: 179 QGKLLMTTGDYKGALEEFSEVIRLAPRFPRSYYELGRVYLKLENQNKALLAFKEVVRLDP 238
Query: 259 QGYWARYVETLVK 271
+ +K
Sbjct: 239 DSPESVKARQYIK 251
>gi|261404029|ref|YP_003240270.1| tetratricopeptide repeat-containing protein [Paenibacillus sp.
Y412MC10]
gi|261280492|gb|ACX62463.1| Tetratricopeptide TPR_2 repeat protein [Paenibacillus sp. Y412MC10]
Length = 581
Score = 42.5 bits (97), Expect = 0.059, Method: Composition-based stats.
Identities = 27/199 (13%), Positives = 57/199 (28%), Gaps = 3/199 (1%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
++ +++AV L + KA +YF + P V ++
Sbjct: 18 ISIEMNANFFFDRAVRSLDRYQYDKALKYFRKAVEYEPDNPVNHCNMAGILSETGDYKAS 77
Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
+ E + M + + Q++ E
Sbjct: 78 NDVLAHILEQVDPLMTECYFYMANNYANMEQFEKAEEALVTYLEEDPNGQFLDEAEEMME 137
Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
Y + +++ E E R L+ G++ A+ + ++ + D A
Sbjct: 138 LLHYELNRPAKLNRIKSREGVVEHEHARALLEEGKFAQAVKLLEEIVKDNPDFLA---AR 194
Query: 231 ARLVEAYVALALMDEAREV 249
L AY + D A+
Sbjct: 195 NNLALAYYYMGRFDTAKRT 213
>gi|283780238|ref|YP_003370993.1| hypothetical protein Psta_2464 [Pirellula staleyi DSM 6068]
gi|283438691|gb|ADB17133.1| Tetratricopeptide domain protein [Pirellula staleyi DSM 6068]
Length = 638
Score = 42.5 bits (97), Expect = 0.060, Method: Composition-based stats.
Identities = 27/231 (11%), Positives = 57/231 (24%), Gaps = 18/231 (7%)
Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99
++ ++ Y KA ++++F A E F + +++
Sbjct: 406 SKTMDELLASDANSQLAPAARYWKAEATFRQKDFESAAEQFEILAAQTSGRAETWLAMVE 465
Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
Q A K + SL + + D RA
Sbjct: 466 LRRAQILAHKEEWQQSLDMLTNLRKRFPAFAQKHEADYLEGRCLAALALLDDARA----- 520
Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219
Y++ A IG Y + Y AI ++
Sbjct: 521 -------------AYMRVLASASGQDTETAAMAAWMIGESYFHQKRYPEAIEAYEQCARG 567
Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
+ ++ + + EA E + + + +A +
Sbjct: 568 HKFPTWQSASLLQAGKCLQLQNKKSEAAEYYRRVVNEFAETTYAAEARERL 618
Score = 39.4 bits (89), Expect = 0.53, Method: Composition-based stats.
Identities = 30/214 (14%), Positives = 72/214 (33%), Gaps = 1/214 (0%)
Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
D+ + ++ + A + + N + A + + +P + L+ +
Sbjct: 91 EDLVSKEIDPELRRQSDFRLAEISYLDGNDADARKRLIAFRQAYPNDSLNAMVLMYLGEI 150
Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
++ + A SL E + YP+S V + ++ + + P +L+ +
Sbjct: 151 DLASEQIDSAISLFSESLENYPKSTCRQQVQLGLACAWLRQKQVKPAVDVLEQLVKSSDA 210
Query: 164 RIVERYTNSPYVK-GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
+V + + A + R + + AAI +F + Y +
Sbjct: 211 TVVRSAKDLLEIAAENENVAGGTALPPAEAALARARQLQQARQLDAAIAQFTAIYRQYPN 270
Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
+ A A ++ EA +++ I E
Sbjct: 271 SPQAPLAKLGAARVHLEQKQYREAESLLASIDEN 304
>gi|260554250|ref|ZP_05826503.1| conserved hypothetical protein [Acinetobacter sp. RUH2624]
gi|260404630|gb|EEW98147.1| conserved hypothetical protein [Acinetobacter sp. RUH2624]
Length = 294
Score = 42.5 bits (97), Expect = 0.060, Method: Composition-based stats.
Identities = 18/114 (15%), Positives = 40/114 (35%), Gaps = 13/114 (11%)
Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
K + M ++ + NS Y A F++ Y A + +
Sbjct: 193 KKAIAPMQNFIKNHPNSIYTGNAYFWLAEF------------HLATDPVNYNEAKKNYNI 240
Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMD-EAREVVSLIQERYPQGYWARYVET 268
V + Y ++ A A+ +L + A + + + +YP+ A++ +
Sbjct: 241 VASQYPNSSKAPRALYQLYSIAKDVDKNTVSANQYKNKLLTQYPKSEEAKFFKK 294
Score = 37.5 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA--LMDEAREVVSLIQERYP 258
K+G AI Q + N+ ++ + A L E ++A +EA++ +++ +YP
Sbjct: 187 YKQGGAKKAIAPMQNFIKNHPNSIYTGNAYFWLAEFHLATDPVNYNEAKKNYNIVASQYP 246
Query: 259 QG 260
Sbjct: 247 NS 248
>gi|17228607|ref|NP_485155.1| hypothetical protein alr1112 [Nostoc sp. PCC 7120]
gi|17130458|dbj|BAB73069.1| alr1112 [Nostoc sp. PCC 7120]
Length = 731
Score = 42.5 bits (97), Expect = 0.060, Method: Composition-based stats.
Identities = 24/211 (11%), Positives = 59/211 (27%), Gaps = 4/211 (1%)
Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS-AGKYQQAASLGEEYIT 122
+ + F KA + + + + + + Y+Q +
Sbjct: 238 GTAYWENNQFLKAANAYAKAPKTARNLYRTARGWQVGGKNREQAISTYKQLVQQFPDARE 297
Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
+ + + + + + L + I+ + + +
Sbjct: 298 TGLGLVRLAEMAKSNKDALPYLNQVIAKFPEQASQALVKKAEILTALKDEKAAQQTWQQL 357
Query: 183 TVGRNQL---AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
+ A +I K +Y +A Q ++ N ++ A A L
Sbjct: 358 ITKYAKSNEAAEYRWKIALEKAKARDYTSAWKWAQPIVVNNPNSILAPRAGFWLGRWAAT 417
Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETLV 270
L EA+ + ++P Y+A L+
Sbjct: 418 LGKQQEAQTAYEYVISQFPYSYYAWRSANLL 448
>gi|218246150|ref|YP_002371521.1| TPR repeat-containing protein [Cyanothece sp. PCC 8801]
gi|218166628|gb|ACK65365.1| TPR repeat-containing protein [Cyanothece sp. PCC 8801]
Length = 878
Score = 42.5 bits (97), Expect = 0.061, Method: Composition-based stats.
Identities = 23/214 (10%), Positives = 51/214 (23%), Gaps = 6/214 (2%)
Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
SV + +++++ K +++A F + P A +L + + Q
Sbjct: 21 PSVVLSQSIDQLFQQGRTAGKMGKYTEAEAIFRRVIELDPNLADAYNNLGNALYYQGKLD 80
Query: 109 KYQQAASLGEEYI---TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
+ A + + + +
Sbjct: 81 EAIAAYQKAIQLNPNDADAYNNLGNALSDQGKLEEAIAAYQKAIQLNPNYADAYYNLGIA 140
Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
+ A +G +G+ AI +Q + +
Sbjct: 141 LSDQGKLEEAIAAYQKAIQLNPNFTQAYYNLGIALSDQGKLEEAIAAYQKAIQLNPNY-- 198
Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
+A L A +DEA + P
Sbjct: 199 -ADAYYNLGNALFDQGKLDEAIAAYQKAIQLDPN 231
Score = 39.8 bits (90), Expect = 0.45, Method: Composition-based stats.
Identities = 22/211 (10%), Positives = 46/211 (21%), Gaps = 9/211 (4%)
Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
+ Y Y + +A + + + P A +L + + Q +
Sbjct: 195 NPNYADAYYNLGNALFDQGKLDEAIAAYQKAIQLDPNDANAYNNLGAALYKQGKLEEAIA 254
Query: 113 AASLGEEYI---TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
A + + + V + + +
Sbjct: 255 AYQKAIQLNPNLAEAYNNLGVALSDQGKRDEAIAAYQKAIQLNPNLAEAYNNLGVALSDQ 314
Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
A A +G +G+ AI +Q + + A
Sbjct: 315 GKRDEAIAAYQKAIQLNPNFALAYNNLGVALSDQGKRDEAIAAYQKAIQLNPNFAL---A 371
Query: 230 MARLVEAYVALALMDEAREVVSL---IQERY 257
L A DEA + +
Sbjct: 372 YNNLGVALSDQGKRDEAIAAYQKAIQLNPNF 402
Score = 39.0 bits (88), Expect = 0.80, Method: Composition-based stats.
Identities = 24/211 (11%), Positives = 50/211 (23%), Gaps = 9/211 (4%)
Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
+ Y Y + + +A + + + P A +L ++ Q +
Sbjct: 127 NPNYADAYYNLGIALSDQGKLEEAIAAYQKAIQLNPNFTQAYYNLGIALSDQGKLEEAIA 186
Query: 113 AASLGEEYITQYPESKNV---DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
A + Y ++ + + + +
Sbjct: 187 AYQKAIQLNPNYADAYYNLGNALFDQGKLDEAIAAYQKAIQLDPNDANAYNNLGAALYKQ 246
Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
A LA +G +G+ AI +Q + + EA
Sbjct: 247 GKLEEAIAAYQKAIQLNPNLAEAYNNLGVALSDQGKRDEAIAAYQKAIQLNPN---LAEA 303
Query: 230 MARLVEAYVALALMDEAREVVSL---IQERY 257
L A DEA + +
Sbjct: 304 YNNLGVALSDQGKRDEAIAAYQKAIQLNPNF 334
>gi|91227602|ref|ZP_01261906.1| hypothetical protein V12G01_20491 [Vibrio alginolyticus 12G01]
gi|91188495|gb|EAS74788.1| hypothetical protein V12G01_20491 [Vibrio alginolyticus 12G01]
Length = 250
Score = 42.5 bits (97), Expect = 0.061, Method: Composition-based stats.
Identities = 11/92 (11%), Positives = 30/92 (32%)
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
+F + +A + + + +Y D+ +A+ +L E
Sbjct: 159 QFQKDYPDSTYSANSHYWLGQLYFAKKQDEDAVKSFAAVVSYKDSNKRADALLKLGEIAE 218
Query: 239 ALALMDEAREVVSLIQERYPQGYWARYVETLV 270
+A++ + + YP A+ + +
Sbjct: 219 RNNNAAQAKKYYQQVVDEYPGSASAKLASSKL 250
Score = 35.9 bits (80), Expect = 5.3, Method: Composition-based stats.
Identities = 16/90 (17%), Positives = 32/90 (35%), Gaps = 3/90 (3%)
Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
LK+ +Y AI FQ +Y D+ ++ + L + Y A
Sbjct: 126 QYTPNVDEQTAYQNAVDLILKKRDYTGAIAAFQQFQKDYPDSTYSANSHYWLGQLYFAKK 185
Query: 242 LMDEAREVVSLIQERYPQGYWARYVETLVK 271
++A + + + Y + + L+K
Sbjct: 186 QDEDAVKSFAAVVS-YKDSN--KRADALLK 212
>gi|86140927|ref|ZP_01059486.1| TPR domain protein [Leeuwenhoekiella blandensis MED217]
gi|85832869|gb|EAQ51318.1| TPR domain protein [Leeuwenhoekiella blandensis MED217]
Length = 594
Score = 42.5 bits (97), Expect = 0.061, Method: Composition-based stats.
Identities = 31/226 (13%), Positives = 78/226 (34%), Gaps = 3/226 (1%)
Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
++ + + R E A + + E+ F+ A Y++Q ++ +A+++ A
Sbjct: 360 KETLDLKLNRFQEARVKMELADILVLEERFNAALIYYSQIQKNLKDNVLAQEARFKVAKT 419
Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
Y G ++ A + + + + D + ++ + + +
Sbjct: 420 SYYKGDFEWAKTQLKVLKSSAEQLIANDAQDLYLLITDNTVDDSTQTALKTF--ARADLL 477
Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
+ + V + +E + + +G Y A ++L+L + D
Sbjct: 478 LFQNKQDEALEVYNTLLAEHKDKAIEDETLLEQAKLFEIKGLYDLAAQNYRLILEKHGDD 537
Query: 224 EHAEEAMARLVEAY-VALALMDEAREVVSLIQERYPQGYWARYVET 268
A++A RL Y L ++A+E I + + +
Sbjct: 538 ILADDAHYRLGNLYADQLQQPEKAKEQYESIIFNFADSIFYVDAQQ 583
>gi|269302452|gb|ACZ32552.1| tetratricopeptide repeat protein [Chlamydophila pneumoniae LPCoLN]
Length = 318
Score = 42.5 bits (97), Expect = 0.061, Method: Composition-based stats.
Identities = 25/189 (13%), Positives = 57/189 (30%), Gaps = 5/189 (2%)
Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
E + + FLK+ NF KA F + FP + ++ + + A
Sbjct: 42 SAEEYFSQGQEFLKKGNFRKALLCFGIITHHFPKDILRNQAQYLIGVCYFKQDHPDLADK 101
Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
Y+ + + ++ R L+ +++ ++ +
Sbjct: 102 AFASYLQLPDAEYSEELFQMKYAIAQRFAQGKRKRICR-----LEGFPKLMNADEDALRI 156
Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
++ A + + + AI + + + + EA RL E
Sbjct: 157 YDEILTAFPSKDLGAQALYSKAALLIVKNDLTEAIKTLKKLTLQFPLHILSSEAFVRLSE 216
Query: 236 AYVALALMD 244
Y+ A +
Sbjct: 217 IYLQQAKKE 225
>gi|206889500|ref|YP_002249884.1| TPR domain protein, putative [Thermodesulfovibrio yellowstonii DSM
11347]
gi|206741438|gb|ACI20495.1| TPR domain protein, putative [Thermodesulfovibrio yellowstonii DSM
11347]
Length = 287
Score = 42.5 bits (97), Expect = 0.061, Method: Composition-based stats.
Identities = 34/261 (13%), Positives = 72/261 (27%), Gaps = 9/261 (3%)
Query: 19 LYKFALTIFF--SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQ--NFS 74
+ K IFF ++ FL G + +T + + ++ V LK + S
Sbjct: 1 MKKIKSKIFFTAIVSAVFLSGCVTTGEYEQIRADITKLHIENSQLKQEVSELKTRMDKMS 60
Query: 75 KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
+ + + + ++ + ++ +
Sbjct: 61 SDLSTATALKEGQLTLIAQTQDYVKELQILKGRFEESSYSNDKKFKELSDKIAELQAKLT 120
Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL----- 189
+ K + Y + + +N
Sbjct: 121 QPQQPIPQKEPEQKKISPGQLKNPKEIYDSAHVDIKEKRYASARDKFQEITKNYPDFELL 180
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
IG Y +Y AI ++ L Y + A A+ + A++ L A+ V
Sbjct: 181 PNSYFWIGETYYSEKKYEDAILAYEEFLKKYPKHDKAPGALLKEGMAFLELKDKKTAKVV 240
Query: 250 VSLIQERYPQGYWARYVETLV 270
+ ERYP+ A + +
Sbjct: 241 FERVIERYPKSKEAEIAQQKI 261
>gi|190575560|ref|YP_001973405.1| putative TPR repeat exported protein [Stenotrophomonas maltophilia
K279a]
gi|190013482|emb|CAQ47117.1| putative TPR repeat exported protein [Stenotrophomonas maltophilia
K279a]
Length = 272
Score = 42.5 bits (97), Expect = 0.061, Method: Composition-based stats.
Identities = 18/70 (25%), Positives = 27/70 (38%), Gaps = 2/70 (2%)
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
K G+Y + F L Y + +A A+ L E+Y A A + RYP
Sbjct: 157 KAGKYDDSAQLFLSFLQLYPNGVYAPNALYWLGESYYATRNFPMAETQFRELLARYPTHD 216
Query: 262 WARYVETLVK 271
+ L+K
Sbjct: 217 --KAAGGLLK 224
Score = 42.1 bits (96), Expect = 0.085, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 34/78 (43%)
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+G Y + A +F+ +LA Y + A + ++ + +D+A++ + +
Sbjct: 186 YWLGESYYATRNFPMAETQFRELLARYPTHDKAAGGLLKVGLSQYGEGKVDQAQQTLESV 245
Query: 254 QERYPQGYWARYVETLVK 271
+YP AR + ++
Sbjct: 246 VAQYPGSDAARTAQDRLQ 263
>gi|193077557|gb|ABO12391.2| putative signal peptide [Acinetobacter baumannii ATCC 17978]
Length = 294
Score = 42.5 bits (97), Expect = 0.062, Method: Composition-based stats.
Identities = 18/114 (15%), Positives = 38/114 (33%), Gaps = 13/114 (11%)
Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
K + M ++ + NS Y A F++ Y A + +
Sbjct: 193 KKAIAPMQNFIKNHPNSIYTGNAYFWLAEF------------HLATDPVNYNEAKKNYNV 240
Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMD-EAREVVSLIQERYPQGYWARYVET 268
V Y ++ A A+ +L + A + + + +YP+ A++
Sbjct: 241 VANQYPNSSKAPRALYQLYSIAKDVDKNTVSANQYKNKLLSQYPKSEEAKFFNK 294
Score = 37.1 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA--LMDEAREVVSLIQERYP 258
K+G AI Q + N+ ++ + A L E ++A +EA++ +++ +YP
Sbjct: 187 YKQGGAKKAIAPMQNFIKNHPNSIYTGNAYFWLAEFHLATDPVNYNEAKKNYNVVANQYP 246
Query: 259 QG 260
Sbjct: 247 NS 248
>gi|239501632|ref|ZP_04660942.1| hypothetical protein AbauAB_04911 [Acinetobacter baumannii AB900]
Length = 294
Score = 42.5 bits (97), Expect = 0.062, Method: Composition-based stats.
Identities = 18/114 (15%), Positives = 38/114 (33%), Gaps = 13/114 (11%)
Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
K + M ++ + NS Y A F++ Y A + +
Sbjct: 193 KKAIAPMQNFIKNHPNSIYTGNAYFWLAEF------------HLATDPVNYNEAKKNYNV 240
Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMD-EAREVVSLIQERYPQGYWARYVET 268
V Y ++ A A+ +L + A + + + +YP+ A++
Sbjct: 241 VANQYPNSSKAPRALYQLYSIAKDVDKNTVSANQYKNKLLSQYPKSEEAKFFNK 294
Score = 36.7 bits (82), Expect = 3.1, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA--LMDEAREVVSLIQERYP 258
K+G AI Q + N+ ++ + A L E ++A +EA++ +++ +YP
Sbjct: 187 YKQGGAKKAIAPMQNFIKNHPNSIYTGNAYFWLAEFHLATDPVNYNEAKKNYNVVANQYP 246
Query: 259 QG 260
Sbjct: 247 NS 248
>gi|149598974|ref|XP_001516420.1| PREDICTED: hypothetical protein [Ornithorhynchus anatinus]
Length = 823
Score = 42.5 bits (97), Expect = 0.063, Method: Composition-based stats.
Identities = 21/212 (9%), Positives = 48/212 (22%), Gaps = 6/212 (2%)
Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD---FPFAGVARKSLLMSAFVQYSAG 108
+D + K ++ KA E++ + R+ A A
Sbjct: 480 SDRYNPSALTNKGNTIFASGDYEKAAEFYKEALRNDSSCTEALYNIGLTYKKLNRLDEAL 539
Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
Q Y + + + L + + +
Sbjct: 540 DCFLKLHAILRNSAQVLYQIANLYEIMEDPNQAIEWLMQLISVVPTDARALAKLGELYDN 599
Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
+ + +G YY+ AI F+ +
Sbjct: 600 EGDKSQAFQYYYESYRYLPSNIEVIEWLGAYYIDTQFCEKAIQYFERAALIRPTQVKWQ- 658
Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQG 260
+ Y +A + I +++P+
Sbjct: 659 --LMVASCYRRSGNYQKALDTYKEIHKKFPEN 688
Score = 35.9 bits (80), Expect = 6.1, Method: Composition-based stats.
Identities = 23/193 (11%), Positives = 55/193 (28%), Gaps = 7/193 (3%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
KA+ FL++++F++A E + A + L + + +
Sbjct: 421 NKAITFLRQKDFNQAVETLKMFEKKDSRVKSAAATNLSFLYYLENEFTQANNYADLAVSS 480
Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVP----YDQRATKLMLQYMSRIVERYTNSPYVKG 177
+Y S + + + + + + L + ++
Sbjct: 481 DRYNPSALTNKGNTIFASGDYEKAAEFYKEALRNDSSCTEALYNIGLTYKKLNRLDEALD 540
Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
+ A +I Y + AI +++ A+A+L E Y
Sbjct: 541 CFLKLHAILRNSAQVLYQIANLYEIMEDPNQAIEWLMQLISVVPTD---ARALAKLGELY 597
Query: 238 VALALMDEAREVV 250
+A +
Sbjct: 598 DNEGDKSQAFQYY 610
>gi|254253148|ref|ZP_04946466.1| hypothetical protein BDAG_02400 [Burkholderia dolosa AUO158]
gi|124895757|gb|EAY69637.1| hypothetical protein BDAG_02400 [Burkholderia dolosa AUO158]
Length = 307
Score = 42.5 bits (97), Expect = 0.063, Method: Composition-based stats.
Identities = 19/111 (17%), Positives = 33/111 (29%)
Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
+ +Y + R + V + + + G + AA F+
Sbjct: 152 RQQKEYYQDLDTRLKKFEPQQATIDGVEGTVQPGETDALSAAQQQFRNGNFKAAAASFRS 211
Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
+A Y + + A L A AL + I +YPQ A
Sbjct: 212 FIAKYPQSPYQPTAQYWLGNAQYALRDYRGSTATWQAIVSKYPQHPRAADA 262
Score = 39.4 bits (89), Expect = 0.48, Method: Composition-based stats.
Identities = 15/125 (12%), Positives = 40/125 (32%), Gaps = 14/125 (11%)
Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
+ K + +Y SPY A++++ G +Y
Sbjct: 194 QQQFRNGNFKAAAASFRSFIAKYPQSPYQPTAQYWL--------------GNAQYALRDY 239
Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
+ +Q +++ Y A +A+ + + A++ + +Y A+
Sbjct: 240 RGSTATWQAIVSKYPQHPRAADALVAIGTNQLEQGQKAAAKKTFEQVVSQYAGSNAAQTA 299
Query: 267 ETLVK 271
+ ++
Sbjct: 300 QGKLE 304
>gi|170723152|ref|YP_001750840.1| tol-pal system protein YbgF [Pseudomonas putida W619]
gi|169761155|gb|ACA74471.1| tol-pal system protein YbgF [Pseudomonas putida W619]
Length = 271
Score = 42.5 bits (97), Expect = 0.063, Method: Composition-based stats.
Identities = 16/111 (14%), Positives = 39/111 (35%), Gaps = 1/111 (0%)
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI-GRYYLKRGEYVAAIPRFQLVLANY 220
I ++ + F +Q A G L +G+ +A F V Y
Sbjct: 159 FDLIKQKDFDKASQAFGAFLRKYPNSQYAGNAQYWLGEVNLAKGDLQSASQAFAQVSQKY 218
Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+++ +L + + D+ + ++ + +YP A+ + ++
Sbjct: 219 PKHSKVPDSLYKLADVERRMGHTDKVKGILQQVITQYPGTSAAQLAQRDLQ 269
Score = 40.5 bits (92), Expect = 0.24, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 32/78 (41%), Gaps = 1/78 (1%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ +K+ ++ A F L Y ++++A A L E +A + A + +
Sbjct: 154 YYDAAFDLIKQKDFDKASQAFGAFLRKYPNSQYAGNAQYWLGEVNLAKGDLQSASQAFAQ 213
Query: 253 IQERYPQ-GYWARYVETL 269
+ ++YP+ + L
Sbjct: 214 VSQKYPKHSKVPDSLYKL 231
Score = 38.6 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 34/84 (40%)
Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
D ++ Y+ A +K+++F KA + F R +P + A + V + G
Sbjct: 143 SEPGDPAKEKLYYDAAFDLIKQKDFDKASQAFGAFLRKYPNSQYAGNAQYWLGEVNLAKG 202
Query: 109 KYQQAASLGEEYITQYPESKNVDY 132
Q A+ + +YP+ V
Sbjct: 203 DLQSASQAFAQVSQKYPKHSKVPD 226
>gi|313205668|ref|YP_004044845.1| tetratricopeptide tpr_1 repeat-containing protein [Riemerella
anatipestifer DSM 15868]
gi|312444984|gb|ADQ81339.1| Tetratricopeptide TPR_1 repeat-containing protein [Riemerella
anatipestifer DSM 15868]
gi|315022600|gb|EFT35626.1| TPR-domain containing protein [Riemerella anatipestifer RA-YM]
gi|325336890|gb|ADZ13164.1| Tetratricopeptide TPR-1 [Riemerella anatipestifer RA-GD]
Length = 986
Score = 42.5 bits (97), Expect = 0.063, Method: Composition-based stats.
Identities = 31/218 (14%), Positives = 61/218 (27%), Gaps = 8/218 (3%)
Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
+ TD Q Y + N+ +A YF + + K+ A Y
Sbjct: 419 NTKTTETDKIEQEVAYLLGTEEFNKGNYKEAELYFKKSLKFNHNQEFYLKAQYWLAQTYY 478
Query: 106 SAGKYQQAASLGEEYIT-----QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
Y A S E+ N D Y ++
Sbjct: 479 QLEDYPSAISYFEKLQKTEGSLDERSQINYDLGYAYFKNKDFGKAKECFKLYLKNPKAEF 538
Query: 161 YMS---RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
R+ + + + A + +G+ A I + ++
Sbjct: 539 KADAELRLADTHYADNELNDAIAIYNNAETSDEYTLFQKAMALGFKGDTEAKISEMKKLV 598
Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
A Y ++E+ ++A+ + AY A + E + +
Sbjct: 599 AQYPNSEYKDDALYEIGTAYAANDEFALSSEYFDKVVK 636
>gi|301062461|ref|ZP_07203112.1| tol-pal system protein YbgF [delta proteobacterium NaphS2]
gi|300443435|gb|EFK07549.1| tol-pal system protein YbgF [delta proteobacterium NaphS2]
Length = 285
Score = 42.5 bits (97), Expect = 0.063, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 34/78 (43%)
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
IG ++ +Y AI FQ V+ Y A+ R A+ L A+ ++ +
Sbjct: 205 FWIGESHMALKQYEQAILAFQKVIKQYPKGNKVPNALLRQALAFDELNDKTSAKLLLKKL 264
Query: 254 QERYPQGYWARYVETLVK 271
++YP+ A+ + +K
Sbjct: 265 IKQYPKSNEAKIAKNKLK 282
>gi|32473196|ref|NP_866190.1| signal peptide [Rhodopirellula baltica SH 1]
gi|32397875|emb|CAD73876.1| hypothetical protein-transmembrane regio and signal peptide
prediction [Rhodopirellula baltica SH 1]
Length = 404
Score = 42.5 bits (97), Expect = 0.063, Method: Composition-based stats.
Identities = 37/218 (16%), Positives = 65/218 (29%), Gaps = 34/218 (15%)
Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
+ D+ T AV ++++ +F A E+ FP + + LM
Sbjct: 199 DQIRYDNPTGRLADDATMAAAVEYMRQGDFETADEFLTDLRETFPESDHFFNAHLMGIRC 258
Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
+ + A KL+ Q
Sbjct: 259 KLEVFAGP---------------------------------KYSGLMLEEADKLVRQTRE 285
Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
R +R + + + A K + Y KR EY AA +Q++L +Y
Sbjct: 286 RFPDRLRDPETSEMVARAAAEVAYRRAEKLNDRAIYREKRSEYGAARLHYQMILRDYPST 345
Query: 224 EHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
A+ A RL + E R +L++ +P
Sbjct: 346 PFADRARQRLEAITSYPDVPAE-RVSATLLKRIFPDSR 382
>gi|320105078|ref|YP_004180669.1| tetratricopeptide repeat-containing protein [Isosphaera pallida
ATCC 43644]
gi|319752360|gb|ADV64120.1| Tetratricopeptide TPR_1 repeat-containing protein [Isosphaera
pallida ATCC 43644]
Length = 500
Score = 42.5 bits (97), Expect = 0.064, Method: Composition-based stats.
Identities = 20/216 (9%), Positives = 54/216 (25%), Gaps = 20/216 (9%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
+ ++ ++ + F+ A + F++ + +P L + K
Sbjct: 164 ENTSWGEAAQFKLGLVQFRRGRFTAARDSFDKAIKTYPGTRHLDVILAHQYALGEYWLKM 223
Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
+ A+ + ++
Sbjct: 224 ASPELAQGRIVDPETSPLRQ-----------FDDKLTTAALTSASTTADGRVVKLARAND 272
Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
+ Y + R + V+ G + + + + + A A
Sbjct: 273 PASYQIPLDKPSWIDRLKGRLPLVDSGGH---------GVQLLERIRHHDPQGPLAPRAA 323
Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
+ + Y ++ DEA + + YP+ A
Sbjct: 324 LLIADYYASIGSYDEAARYYTQVVTEYPKSPEALRA 359
>gi|328473191|gb|EGF44039.1| hypothetical protein VP10329_20975 [Vibrio parahaemolyticus 10329]
Length = 251
Score = 42.5 bits (97), Expect = 0.065, Method: Composition-based stats.
Identities = 12/93 (12%), Positives = 31/93 (33%)
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
+F + +A + + + +Y D+ +A+ +L E
Sbjct: 159 QFQKDYPDSTYSANSHYWLGQLYFAKKQDKDAVKSFAAVVSYKDSNKRADALLKLGEIAE 218
Query: 239 ALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+A++ + + YP A+ + +K
Sbjct: 219 RNNNAAQAKKYYQQVVDEYPGSASAKLAGSKLK 251
>gi|307718946|ref|YP_003874478.1| TPR domain-containing protein [Spirochaeta thermophila DSM 6192]
gi|306532671|gb|ADN02205.1| TPR domain protein [Spirochaeta thermophila DSM 6192]
Length = 225
Score = 42.5 bits (97), Expect = 0.065, Method: Composition-based stats.
Identities = 18/215 (8%), Positives = 48/215 (22%), Gaps = 5/215 (2%)
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
+++ +E + +A + F + + + + + +
Sbjct: 6 FQRGKQLFQEGKYQEALQEFLSSDGTEGLSPSDQAYYMGLCYARLGEYEEALLYLEQVLT 65
Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV----- 175
+P + + S + + + + + + Y+
Sbjct: 66 TDTHPLKRYQVRMLIGYIYSLTERYKLAQLEFERVVEEGFESATVYNALAHVRYMLGELR 125
Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
+ YL + V + A L
Sbjct: 126 ESLSAAEKALSLDPDNPSALNSMGYLLAEQGVRLSLALKYCRKAVQKAPRNPAYQDSLAW 185
Query: 236 AYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
A EAR V+ + P R ++
Sbjct: 186 ALYKNGQFAEARNVIRVAHALAPDSPTIREHYEII 220
>gi|163848374|ref|YP_001636418.1| hypothetical protein Caur_2828 [Chloroflexus aurantiacus J-10-fl]
gi|222526297|ref|YP_002570768.1| tetratricopeptide repeat-containing protein [Chloroflexus sp.
Y-400-fl]
gi|163669663|gb|ABY36029.1| Tetratricopeptide TPR_2 repeat protein [Chloroflexus aurantiacus
J-10-fl]
gi|222450176|gb|ACM54442.1| Tetratricopeptide TPR_2 repeat protein [Chloroflexus sp. Y-400-fl]
Length = 1113
Score = 42.5 bits (97), Expect = 0.065, Method: Composition-based stats.
Identities = 29/230 (12%), Positives = 60/230 (26%), Gaps = 6/230 (2%)
Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
+ + L+ N +A + + P A L + +
Sbjct: 884 ETAAALPGGDTNAAAQFWLGEALLRNDNLVRALAAYQRALELQPQYPEALLGLAQTQYAL 943
Query: 105 YSAGKYQQAASLGEEYITQYPESK-NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
A + Q + + Y E+ + G ++ +
Sbjct: 944 GRAEEALQTVERAIQQKSNYAEAHLFRGKLLQEAGRFAEARAAYDAAIGANDRIAESFYR 1003
Query: 164 RIVERYTNSPYVKGARFYVTVG--RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
R + N Y + R + +GR Y +G +A+ Q +
Sbjct: 1004 RALLAIRNGEYDQAIRDLNRATALQANFPEAYYWLGRAYYAQGRSESALQAIQQAITLNP 1063
Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+ EA+ A AR+ + R P W + ++
Sbjct: 1064 NYS---EAIFYSGLIAEDQANFAAARDAYQTLISREPTSEWGQRALAQIE 1110
>gi|311695031|gb|ADP97904.1| tetratricopeptide TPR_2 repeat protein [marine bacterium HP15]
Length = 947
Score = 42.5 bits (97), Expect = 0.066, Method: Composition-based stats.
Identities = 23/202 (11%), Positives = 43/202 (21%), Gaps = 11/202 (5%)
Query: 73 FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132
+ E R + + +Y A + E YI + +
Sbjct: 267 YLDGAETLQALFRQTGGRPYEILVYDRYSELLLEREQYSDAIDVFEAYI---EDHPESPW 323
Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
+ + + A ++ QL +
Sbjct: 324 APRYHIRIIDTLELAGFTRTIPERKAGFVSLYGIYSDYWQSAGPDAIGFIEQQLEQLLPE 383
Query: 193 EVEIGRY--------YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244
+ Y A + A + D E + L E Y+ L
Sbjct: 384 LADRQYLLAGEAEDDQQADDHYRKAASYYAEFAATFPDHPRTPERLFLLGETYLELEDWP 443
Query: 245 EAREVVSLIQERYPQGYWARYV 266
A + YP+ A
Sbjct: 444 AAIAAFERVAYDYPEDTVADRA 465
Score = 35.9 bits (80), Expect = 6.5, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 29/78 (37%)
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
+ E E AI +Q +L+ Y + E ++ +L A+ + E
Sbjct: 91 EFQRAERKMADSAVDELSGAIDAYQRLLSEYPEREGNDQIYYQLARAWELRGATPQQLEA 150
Query: 250 VSLIQERYPQGYWARYVE 267
++ + RYP + +
Sbjct: 151 LNTLVRRYPDSEYWVEAQ 168
>gi|218885876|ref|YP_002435197.1| tol-pal system protein YbgF [Desulfovibrio vulgaris str. 'Miyazaki
F']
gi|218756830|gb|ACL07729.1| tol-pal system protein YbgF [Desulfovibrio vulgaris str. 'Miyazaki
F']
Length = 285
Score = 42.5 bits (97), Expect = 0.066, Method: Composition-based stats.
Identities = 15/94 (15%), Positives = 30/94 (31%)
Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
+ G + Y AI F+ V A + A +++ ++ A
Sbjct: 189 DGFLGDYPNSALVPNALYWKGEALYAQRRYADAIVAFKEVTARFPKHHKAADSLLKIALA 248
Query: 237 YVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
Y L + R + ++E +P A+
Sbjct: 249 YKQLGDDENVRFHLKALREDHPDSPAAKLARQRF 282
Score = 41.7 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 31/78 (39%), Gaps = 2/78 (2%)
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
E L+RG+ A RF L +Y ++ A+ EA A +A +
Sbjct: 169 YESALNLLQRGKTDEARVRFDGFLGDYPNSALVPNALYWKGEALYAQRRYADAIVAFKEV 228
Query: 254 QERYPQGYWARYVETLVK 271
R+P + ++L+K
Sbjct: 229 TARFP--KHHKAADSLLK 244
>gi|189425029|ref|YP_001952206.1| hypothetical protein Glov_1970 [Geobacter lovleyi SZ]
gi|189421288|gb|ACD95686.1| hypothetical protein Glov_1970 [Geobacter lovleyi SZ]
Length = 348
Score = 42.5 bits (97), Expect = 0.066, Method: Composition-based stats.
Identities = 21/148 (14%), Positives = 38/148 (25%), Gaps = 13/148 (8%)
Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
+ P+ + + D + L ++ A
Sbjct: 209 EPPKEWTDSGKIVDICARWNINHGHYLADSGKYQDALNVFQIALDLTKVESVRADAHMER 268
Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242
+ A+ + LVL Y + AE A+ + +
Sbjct: 269 GAVYARF-------------LSNPELALAEYLLVLEEYPNLPQAEFALFNAAQTLAEMGF 315
Query: 243 MDEAREVVSLIQERYPQGYWARYVETLV 270
D+A+ YPQG ETL+
Sbjct: 316 NDQAKLRFEQYLRLYPQGKQRSNAETLL 343
>gi|302343855|ref|YP_003808384.1| tol-pal system protein YbgF [Desulfarculus baarsii DSM 2075]
gi|301640468|gb|ADK85790.1| tol-pal system protein YbgF [Desulfarculus baarsii DSM 2075]
Length = 285
Score = 42.5 bits (97), Expect = 0.067, Method: Composition-based stats.
Identities = 21/121 (17%), Positives = 45/121 (37%), Gaps = 14/121 (11%)
Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
Y+Q++ +++ + Y A+ + +G Y + + A
Sbjct: 175 YEQKSFDAARDRFEELLKDKPDGAY--------------AASAQFWVGECYYSQKRFEEA 220
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
I + V+ Y+ A AM + A+ AL A+ V++ + YP+ A +
Sbjct: 221 ILAYNQVIKRYAKNAKAPAAMLKQGLAFSALGDKRTAKIVLNKLVNTYPKSSQAGLAKKY 280
Query: 270 V 270
+
Sbjct: 281 L 281
>gi|187479387|ref|YP_787412.1| hypothetical protein BAV2917 [Bordetella avium 197N]
gi|115423974|emb|CAJ50527.1| putative exported protein [Bordetella avium 197N]
Length = 228
Score = 42.5 bits (97), Expect = 0.067, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 30/79 (37%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ +G +Y AI + +L D A +A+ + + + L A+ +
Sbjct: 148 QFYLGSARYASRDYKGAIEQLSNLLQKSPDNARAPDALLVIAGSQIELNNRAGAKTTLQR 207
Query: 253 IQERYPQGYWARYVETLVK 271
I YP A ++ ++
Sbjct: 208 IVRDYPNSPAANTAKSRLQ 226
>gi|114765729|ref|ZP_01444827.1| hypothetical protein 1100011001327_R2601_12438 [Pelagibaca
bermudensis HTCC2601]
gi|114541946|gb|EAU44981.1| hypothetical protein R2601_12438 [Roseovarius sp. HTCC2601]
Length = 276
Score = 42.5 bits (97), Expect = 0.067, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 32/68 (47%)
Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
+ G+ A RF ANY +++ A EA+ RL A AL ++EA ++ + RYP
Sbjct: 201 DQTGDTRTAARRFLDAYANYPESDAAPEALWRLGTALGALQSVNEACVTLAEVGARYPGT 260
Query: 261 YWARYVET 268
E
Sbjct: 261 PAVAEAEA 268
Score = 37.1 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 10/77 (12%), Positives = 21/77 (27%)
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
+ + L G++ A +F + + +A+ +A A
Sbjct: 153 EQNDFRRAQEALASGDFQGAADQFATFRETFPGSPLEPDALLAEGKALDQTGDTRTAARR 212
Query: 250 VSLIQERYPQGYWARYV 266
YP+ A
Sbjct: 213 FLDAYANYPESDAAPEA 229
>gi|118580269|ref|YP_901519.1| hypothetical protein Ppro_1849 [Pelobacter propionicus DSM 2379]
gi|118502979|gb|ABK99461.1| hypothetical protein Ppro_1849 [Pelobacter propionicus DSM 2379]
Length = 297
Score = 42.5 bits (97), Expect = 0.067, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 29/70 (41%)
Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
G ++ GEY AI ++ ++ + + E+A R+ AY + A + Q
Sbjct: 41 GDAFMAEGEYYRAITEYKKLIILFPASRRVEDAGFRIAMAYYRGEEYEAAVRAFAAFQVN 100
Query: 257 YPQGYWARYV 266
+P +A
Sbjct: 101 HPGSGYAPQA 110
Score = 42.5 bits (97), Expect = 0.073, Method: Composition-based stats.
Identities = 15/78 (19%), Positives = 29/78 (37%)
Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243
++ I Y + EY AA+ F N+ + +A +A +++ L
Sbjct: 65 PASRRVEDAGFRIAMAYYRGEEYEAAVRAFAAFQVNHPGSGYAPQAGYYEGMSHLGLNRP 124
Query: 244 DEAREVVSLIQERYPQGY 261
++A S + YP
Sbjct: 125 EKAENSFSRVVATYPDSD 142
>gi|323699326|ref|ZP_08111238.1| cell wall hydrolase/autolysin [Desulfovibrio sp. ND132]
gi|323459258|gb|EGB15123.1| cell wall hydrolase/autolysin [Desulfovibrio desulfuricans ND132]
Length = 600
Score = 42.5 bits (97), Expect = 0.069, Method: Composition-based stats.
Identities = 14/70 (20%), Positives = 24/70 (34%), Gaps = 7/70 (10%)
Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA-------LMDEAREVVSLIQE 255
R + F L L + +A +A+ + Y L +A + +
Sbjct: 59 RSNWQKVEETFSLCLKTAPNGPYAPKALYYIGRVYEELGAQSGLKSDFRKAVDYYGRVLA 118
Query: 256 RYPQGYWARY 265
RYP+ WA
Sbjct: 119 RYPRHGWADD 128
Score = 39.0 bits (88), Expect = 0.78, Method: Composition-based stats.
Identities = 23/122 (18%), Positives = 45/122 (36%), Gaps = 8/122 (6%)
Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
+ + + + S ++ N PY A +Y+ +L A+ + A+
Sbjct: 58 YRSNWQKVEETFSLCLKTAPNGPYAPKALYYIGRVYEELGAQSGLKSDFR-------KAV 110
Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAY-VALALMDEAREVVSLIQERYPQGYWARYVETL 269
+ VLA Y A++ + R + Y L AR ++ I YP+ +
Sbjct: 111 DYYGRVLARYPRHGWADDCLFRRADVYARRLNETTAARLDLATIIVDYPRSDMRAKADAA 170
Query: 270 VK 271
+K
Sbjct: 171 LK 172
>gi|315224829|ref|ZP_07866650.1| TPR-domain containing protein [Capnocytophaga ochracea F0287]
gi|314945232|gb|EFS97260.1| TPR-domain containing protein [Capnocytophaga ochracea F0287]
Length = 1001
Score = 42.5 bits (97), Expect = 0.069, Method: Composition-based stats.
Identities = 34/216 (15%), Positives = 58/216 (26%), Gaps = 23/216 (10%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
Y + Y A ++N++ A F + + P
Sbjct: 493 PKTEEYAKGFYGLAYANFNQKNYAGAIANFEKYLKQNPKNS------------------- 533
Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
S + I + +S V Y+ Y ++I DQ V+R
Sbjct: 534 ----SWKHDAILRLADSYFVTGKYWPAMEGYNKLIEAKSSDQDYAAYQKAISYGFVDRLN 589
Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
+ N E+G Y+ +G + +Q + Y AM
Sbjct: 590 SKIEDLERFVKNYKSSNLRPNALFELGNAYVTKGNTQKGLQYYQQLAKEYKGNVLVPRAM 649
Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
R Y +A + I + YP A
Sbjct: 650 LREGLVYYNRNENQKALTLFQTIAKDYPNTNEASQA 685
>gi|327269026|ref|XP_003219296.1| PREDICTED: intraflagellar transport protein 88 homolog [Anolis
carolinensis]
Length = 820
Score = 42.5 bits (97), Expect = 0.071, Method: Composition-based stats.
Identities = 23/212 (10%), Positives = 54/212 (25%), Gaps = 6/212 (2%)
Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
TD + K ++ KA E++ + R+ A ++ ++ +
Sbjct: 480 TDRYNPAALTNKGNTIFVNGDYEKAAEFYKEALRNDSSCTEALYNIGLTLKKLNRLDEAL 539
Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY---DQRATKLMLQYMSRIVER 168
+ + + Y + Q I + L + + +
Sbjct: 540 DSFLKLHAILRNSAQVLFQIASIYELMEDPNQAIEWLMQLISVVPTDSHALAKLGELYDN 599
Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
+ F +G YY+ AI F+ +
Sbjct: 600 EGDKSQAFQYYFESYRYFPSNIEVIEWLGAYYIDTQFCEKAIHYFERAALIQPTQVKWQ- 658
Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQG 260
+ Y +A + +I ++P
Sbjct: 659 --LMVASCYRRSGNYQKALDTYKMIHRKFPDN 688
>gi|256819391|ref|YP_003140670.1| hypothetical protein Coch_0551 [Capnocytophaga ochracea DSM 7271]
gi|256580974|gb|ACU92109.1| Tetratricopeptide TPR_2 repeat protein [Capnocytophaga ochracea DSM
7271]
Length = 1001
Score = 42.5 bits (97), Expect = 0.071, Method: Composition-based stats.
Identities = 34/216 (15%), Positives = 58/216 (26%), Gaps = 23/216 (10%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
Y + Y A ++N++ A F + + P
Sbjct: 493 PKTEEYAKGFYGLAYANFNQKNYAGAIANFEKYLKQNPKNS------------------- 533
Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
S + I + +S V Y+ Y ++I DQ V+R
Sbjct: 534 ----SWKHDAILRLADSYFVTGKYWPAMEGYNKLIEAKSSDQDYAAYQKAISYGFVDRLN 589
Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
+ N E+G Y+ +G + +Q + Y AM
Sbjct: 590 SKIEDLERFVKNYKSSNLRPNALFELGNAYVTKGNTQKGLQYYQQLAKEYKGNVLVPRAM 649
Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
R Y +A + I + YP A
Sbjct: 650 LREGLVYYNRNENQKALTLFQTIAKDYPNTNEASQA 685
>gi|149910557|ref|ZP_01899196.1| hypothetical protein PE36_02549 [Moritella sp. PE36]
gi|149806400|gb|EDM66373.1| hypothetical protein PE36_02549 [Moritella sp. PE36]
Length = 252
Score = 42.5 bits (97), Expect = 0.071, Method: Composition-based stats.
Identities = 13/81 (16%), Positives = 30/81 (37%)
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
A +G K + A F+ ++ Y + +++ +L + EA+
Sbjct: 168 ANAHYWLGLLLRKDNKNDEAKVEFEKIVTQYPASNKRADSLQKLGQLAKLTGSNSEAKRY 227
Query: 250 VSLIQERYPQGYWARYVETLV 270
L+ + YP A+ + +
Sbjct: 228 FELVIKDYPNDSVAKLAKQEL 248
Score = 39.8 bits (90), Expect = 0.45, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 29/79 (36%), Gaps = 2/79 (2%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ +Y AIP Q ++ Y ++E A A L DEA+
Sbjct: 134 YNYAIKLIKNERKYDEAIPALQSFISTYPESELAANAHYWLGLLLRKDNKNDEAKVEFEK 193
Query: 253 IQERYPQGYWARYVETLVK 271
I +YP + ++L K
Sbjct: 194 IVTQYPASN--KRADSLQK 210
>gi|124516317|gb|EAY57825.1| putative TPR-domain containing protein [Leptospirillum rubarum]
Length = 719
Score = 42.5 bits (97), Expect = 0.071, Method: Composition-based stats.
Identities = 11/68 (16%), Positives = 22/68 (32%)
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
Y ++ + A ++ S++ EA+ R+ L + + YP
Sbjct: 260 YADRKAHHRRAFALYREFRRFGSESPLVPEALYRMAILSGKLGKPLSMEARLLEVVHEYP 319
Query: 259 QGYWARYV 266
WA
Sbjct: 320 TTRWADRA 327
>gi|260900752|ref|ZP_05909147.1| tetratricopeptide repeat protein [Vibrio parahaemolyticus AQ4037]
gi|308110196|gb|EFO47736.1| tetratricopeptide repeat protein [Vibrio parahaemolyticus AQ4037]
Length = 251
Score = 42.5 bits (97), Expect = 0.072, Method: Composition-based stats.
Identities = 12/93 (12%), Positives = 31/93 (33%)
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
+F + +A + + + +Y D+ +A+ +L E
Sbjct: 159 QFQKDYPDSTYSANSHYWLGQLYFAKKQDKDAVKSFAAVVSYKDSNKRADALLKLGEIAE 218
Query: 239 ALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+A++ + + YP A+ + +K
Sbjct: 219 RNNNAAQAKKYYQQVVDEYPGSASAKLAGSKLK 251
>gi|290474097|ref|YP_003466973.1| putative periplasmic protein contains a protein prenylyltransferase
domain [Xenorhabdus bovienii SS-2004]
gi|289173406|emb|CBJ80183.1| putative periplasmic protein contains a protein prenylyltransferase
domain [Xenorhabdus bovienii SS-2004]
Length = 255
Score = 42.5 bits (97), Expect = 0.072, Method: Composition-based stats.
Identities = 15/120 (12%), Positives = 41/120 (34%), Gaps = 14/120 (11%)
Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
+ + + V+ Y S Y+ +++ K+ A
Sbjct: 147 NTKEYDKAISAFQTFVKTYPKSKYLSNTNYWLGQLNYNKGKKD--------------DAA 192
Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
F V+ +Y ++ + +++ ++ +A+ V + ++YP A+ E +
Sbjct: 193 YYFATVVKDYPKSQKSSDSLYKVGLIMQEKGQKVKAKAVYQQVVKQYPGTNSAKMAEKKI 252
Score = 40.9 bits (93), Expect = 0.18, Method: Composition-based stats.
Identities = 14/70 (20%), Positives = 27/70 (38%), Gaps = 2/70 (2%)
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
EY AI FQ + Y +++ L + D+A + + + YP+
Sbjct: 147 NTKEYDKAISAFQTFVKTYPKSKYLSNTNYWLGQLNYNKGKKDDAAYYFATVVKDYPKSQ 206
Query: 262 WARYVETLVK 271
+ ++L K
Sbjct: 207 --KSSDSLYK 214
>gi|150024185|ref|YP_001295011.1| hypothetical protein FP0071 [Flavobacterium psychrophilum JIP02/86]
gi|149770726|emb|CAL42190.1| Protein of unknown function [Flavobacterium psychrophilum JIP02/86]
Length = 592
Score = 42.5 bits (97), Expect = 0.072, Method: Composition-based stats.
Identities = 31/208 (14%), Positives = 69/208 (33%), Gaps = 3/208 (1%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
E A + L ++ F++A Y+ Q VA ++ L A Y G + A
Sbjct: 376 ELADVLLLDEKFNQAIIYYAQIQDGLENDQVAHEASLKMAKASYYKGDFDWAQKQFTVLK 435
Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
+ + D + + +S + + + T +
Sbjct: 436 SSTSQLIANDSMELFLLISDNTVEDSTQVALKKFSKA--DFLGYQNKNTEALQAFETILL 493
Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA-L 240
G + IG+ Y K+ ++ A+ +Q ++ +++ + +EA+ E Y L
Sbjct: 494 QHKGEKIEDITLLRIGKLYEKQNNFIQALNYYQQIIDQHANGIYIDEALFFTAEIYRKQL 553
Query: 241 ALMDEAREVVSLIQERYPQGYWARYVET 268
+ +A+ I + +
Sbjct: 554 PDIAKAKTYYEKIIFAHQDSIYFVEARN 581
>gi|222056474|ref|YP_002538836.1| Lytic transglycosylase catalytic [Geobacter sp. FRC-32]
gi|221565763|gb|ACM21735.1| Lytic transglycosylase catalytic [Geobacter sp. FRC-32]
Length = 717
Score = 42.5 bits (97), Expect = 0.073, Method: Composition-based stats.
Identities = 17/218 (7%), Positives = 58/218 (26%), Gaps = 12/218 (5%)
Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
+ E++ + + +++A + F+ + + + A + + Y+
Sbjct: 221 EPLSTNEIFRQGTILFDLGKYAQAIKTFDSVLQKSSNPEINVRFQFKKAQALFKSRHYKD 280
Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA------------TKLMLQ 160
A L + + + + A+ ++ L
Sbjct: 281 AEQLFTALGKVNSGKVLNGEIRFWLARTLAKNGKEDEAVSAYLLLADTWPKAALADDALL 340
Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220
++I + + + + K+ + +R +
Sbjct: 341 EAAQIRKSQKKTDEAQQLLQRSLFLYPESGLKKSLLWEIAWERYQAKDYKAASDWFGKLA 400
Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
+ A+ ++ A + A+ S + +P
Sbjct: 401 GYENARDRALYWRGKSLAAAGDQEGAKASFSQLMTEFP 438
Score = 39.8 bits (90), Expect = 0.37, Method: Composition-based stats.
Identities = 29/247 (11%), Positives = 62/247 (25%), Gaps = 41/247 (16%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
F ++ + F + T E ++A +++++ A E
Sbjct: 1 MLFRSLTALALIILFSISASG----------TTLFPLPDEALQEASKHFRDKDYGPARES 50
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
+ AA E++ + + L+G
Sbjct: 51 ALKA-----------------PQSGIRDFILGMAAIKLEQWQEAISYLGYAAHNFPLLGD 93
Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
Q L + ++++ Y SP + A + G
Sbjct: 94 YALYNQATAFSRQDKHPEALASLGKMLKVYPESPINRAAIYLK--------------GNE 139
Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
G ++ A+ + + Y + A+ R L A ++ I YP
Sbjct: 140 LYASGNFIDALKTYTDFIERYPQGADSLTALYRSALCREQLGDPAAAASILRSIPINYPA 199
Query: 260 GYWARYV 266
Sbjct: 200 SSLTPKA 206
Score = 35.9 bits (80), Expect = 6.4, Method: Composition-based stats.
Identities = 32/238 (13%), Positives = 69/238 (28%), Gaps = 36/238 (15%)
Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
+Y K NF A + + +P + +L SA + G AAS+
Sbjct: 132 AIYLKGNELYASGNFIDALKTYTDFIERYPQGADSLTALYRSALCREQLGDPAAAASILR 191
Query: 119 EYITQYPESKNVDYV-------------YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
YP S + + + +D ++ +
Sbjct: 192 SIPINYPASSLTPKASLDLERLAQTGIKIEPLSTNEIFRQGTILFDLGKYAQAIKTFDSV 251
Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAK-----------------------EVEIGRYYLK 202
+++ +N +F + + R K
Sbjct: 252 LQKSSNPEINVRFQFKKAQALFKSRHYKDAEQLFTALGKVNSGKVLNGEIRFWLARTLAK 311
Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
G+ A+ + L+ + A A++A+ + + DEA++++ YP+
Sbjct: 312 NGKEDEAVSAYLLLADTWPKAALADDALLEAAQIRKSQKKTDEAQQLLQRSLFLYPES 369
>gi|222056065|ref|YP_002538427.1| hypothetical protein [Geobacter sp. FRC-32]
gi|221565354|gb|ACM21326.1| Tetratricopeptide TPR_2 repeat protein [Geobacter sp. FRC-32]
Length = 599
Score = 42.5 bits (97), Expect = 0.073, Method: Composition-based stats.
Identities = 25/243 (10%), Positives = 63/243 (25%), Gaps = 20/243 (8%)
Query: 37 GWERQSSRDVYLD--------------------SVTDVRYQREVYEKAVLFLKEQNFSKA 76
G ++ ++Y + D Y Y+ A+ ++K +A
Sbjct: 16 GCSSKAKEELYAEGISQIGKGNAGGAIVLLKNALEKDPEYLSARYQLALAYVKANKHEQA 75
Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
+ F Q P L + + + + E+ + Y
Sbjct: 76 EKEFLQVLEQNPAKSTVHLDLARLYNTMGKPEQARAEVEEYLKSNGRTAEALGLIGESYA 135
Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196
+ + Q R + + + Y AR +
Sbjct: 136 LQKNLEQAERYLLQSMQGDTKNTGVKLALAGIYMAWRKHPEARRQLEETLAMEPKNSKAC 195
Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
+ +L + A ++ Y+ +++AR++ + + +
Sbjct: 196 YLMAALENTMGNSDRALELYQQIAGFDKADPVAPYKMGLVYLDKHDVEKARKLAAYLVKT 255
Query: 257 YPQ 259
+P
Sbjct: 256 FPD 258
>gi|260885435|ref|ZP_05735039.2| putative TPR domain protein [Prevotella tannerae ATCC 51259]
gi|260852363|gb|EEX72232.1| putative TPR domain protein [Prevotella tannerae ATCC 51259]
Length = 1257
Score = 42.1 bits (96), Expect = 0.074, Method: Composition-based stats.
Identities = 13/133 (9%), Positives = 36/133 (27%)
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
+ A + + + + + Q
Sbjct: 645 YQLYLLYMRWQKPLEAEQYKRLLVEHFPDSAISKRLQDPNYLHDAQFAVQFEDSLYAATY 704
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
++G++ F+ Y D + ++ + + A + +S + ++YP
Sbjct: 705 NAYRKGDFATVGANFERSTQKYPDGANRDKFLFVQALTRLNRGEYKSAEDALSTLVKQYP 764
Query: 259 QGYWARYVETLVK 271
+ E +VK
Sbjct: 765 KSELQPMAEQIVK 777
Score = 39.0 bits (88), Expect = 0.77, Method: Composition-based stats.
Identities = 10/68 (14%), Positives = 28/68 (41%)
Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
++ A + ++ +Y + ++A +L Y+ EA + L+ E +P
Sbjct: 615 DDLTDFPLAARTLERLVRHYPKFDRLQDAYYQLYLLYMRWQKPLEAEQYKRLLVEHFPDS 674
Query: 261 YWARYVET 268
++ ++
Sbjct: 675 AISKRLQD 682
>gi|71909660|ref|YP_287247.1| hypothetical protein Daro_4051 [Dechloromonas aromatica RCB]
gi|71849281|gb|AAZ48777.1| conserved hypothetical protein [Dechloromonas aromatica RCB]
Length = 243
Score = 42.1 bits (96), Expect = 0.074, Method: Composition-based stats.
Identities = 16/109 (14%), Positives = 34/109 (31%)
Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
+ D + + YE A+ K + +A F + +P + +A +
Sbjct: 105 AGDTPNGTVAKPAVDPAKESQDYEAALNQFKAGKYKEAAVGFGAFVQKYPDSSLAPNAQY 164
Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147
Y+ ++A T+Y ES + + +M
Sbjct: 165 WLGNAWYAQRDCKRAIEAQSLVTTKYAESAKAPDAWLAISTCQQEMGNP 213
Score = 36.7 bits (82), Expect = 3.1, Method: Composition-based stats.
Identities = 24/211 (11%), Positives = 54/211 (25%), Gaps = 15/211 (7%)
Query: 62 EKAVLFLK-EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
++A L + E ++ ++ Y +
Sbjct: 45 QQAKAQLDLAGQIQRQAEEISRLRGQIETLNYELETAKKRQQDFYLDLDTRLRKFESPAA 104
Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
P S + K V++Y +S A++
Sbjct: 105 AGDTPNGTVAKPAVDPAKESQDYEAALNQFKAGKYKEAAVGFGAFVQKYPDSSLAPNAQY 164
Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
++ G + + + AI LV Y+++ A +A + +
Sbjct: 165 WL--------------GNAWYAQRDCKRAIEAQSLVTTKYAESAKAPDAWLAISTCQQEM 210
Query: 241 ALMDEAREVVSLIQERYPQGYWARYVETLVK 271
A+ + + +YP A +K
Sbjct: 211 GNPTGAKRSLETVIAKYPSAPAADTARERLK 241
>gi|282880108|ref|ZP_06288828.1| tetratricopeptide repeat protein [Prevotella timonensis CRIS 5C-B1]
gi|281305981|gb|EFA98021.1| tetratricopeptide repeat protein [Prevotella timonensis CRIS 5C-B1]
Length = 1123
Score = 42.1 bits (96), Expect = 0.075, Method: Composition-based stats.
Identities = 12/71 (16%), Positives = 22/71 (30%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ K + ++ Y EH + A L Y L A V
Sbjct: 598 YHAGVIFKDKLDNLRLGEKALRRLVEQYPTYEHMDLAYYHLFLLYSRLHQPTLANGYVQR 657
Query: 253 IQERYPQGYWA 263
++ ++P+ W
Sbjct: 658 LKTQFPKSEWT 668
>gi|269967694|ref|ZP_06181744.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
gi|269827781|gb|EEZ82065.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
Length = 250
Score = 42.1 bits (96), Expect = 0.075, Method: Composition-based stats.
Identities = 11/92 (11%), Positives = 30/92 (32%)
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
+F + +A + + + +Y D+ +A+ +L E
Sbjct: 159 QFQKDYPDSTYSANSHYWLGQLYFAKKQDEDAVKSFAAVVSYKDSNKRADALLKLGEIAE 218
Query: 239 ALALMDEAREVVSLIQERYPQGYWARYVETLV 270
+A++ + + YP A+ + +
Sbjct: 219 RNNNAAQAKKYYQQVVDEYPGSASAKLASSKL 250
Score = 35.9 bits (80), Expect = 6.7, Method: Composition-based stats.
Identities = 16/90 (17%), Positives = 32/90 (35%), Gaps = 3/90 (3%)
Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
LK+ +Y AI FQ +Y D+ ++ + L + Y A
Sbjct: 126 QYTPNVDEQTAYQNAVDLILKKRDYTGAIAAFQQFQKDYPDSTYSANSHYWLGQLYFAKK 185
Query: 242 LMDEAREVVSLIQERYPQGYWARYVETLVK 271
++A + + + Y + + L+K
Sbjct: 186 QDEDAVKSFAAVVS-YKDSN--KRADALLK 212
>gi|317130258|ref|YP_004096540.1| serine/threonine protein kinase [Bacillus cellulosilyticus DSM
2522]
gi|315475206|gb|ADU31809.1| serine/threonine protein kinase [Bacillus cellulosilyticus DSM
2522]
Length = 648
Score = 42.1 bits (96), Expect = 0.075, Method: Composition-based stats.
Identities = 30/225 (13%), Positives = 73/225 (32%), Gaps = 7/225 (3%)
Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLK-EQNFSKAYEYFNQC-SRDFPFAGVARKSL 97
+ + + R R +++ + + + ++S A +Y Q + P A +
Sbjct: 366 SKIESYINDEYGQVHRNDRVLFKLGMTYFDVQNDYSNALKYLQQVDEEEIPQARYYKTLA 425
Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
+ + + ++ E Y P ++ Y+ + Y+ +
Sbjct: 426 TTMSQMNINYEEFTDYLEEFEAYNDGLPNTREKIDNYHALANIYSSYKAQIQGANTKVIE 485
Query: 158 MLQYMSRIVERYTNS--PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
++ I++R N Y F + + + + K A + L
Sbjct: 486 LITKSEEIIDRMDNEEMQYRYEMDFTYKLAQAFHSRATNSEDQESAKEDYEHAIEYYYDL 545
Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
+ + ++ EE R+ Y + +A E L+ E +P
Sbjct: 546 IDLDVAN---QEEIKTRIGVIYQQMGEETQAIEQFHLVIEEFPNS 587
>gi|261252512|ref|ZP_05945085.1| TPR repeat-containing protein [Vibrio orientalis CIP 102891]
gi|260935903|gb|EEX91892.1| TPR repeat-containing protein [Vibrio orientalis CIP 102891]
Length = 256
Score = 42.1 bits (96), Expect = 0.075, Method: Composition-based stats.
Identities = 9/92 (9%), Positives = 27/92 (29%)
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
+F + + + + Y D+ +A+ +L +
Sbjct: 165 QFQKDYPDSTFTPNSHYWLGQLYFAKKQDKDAVKSFAAVVAYKDSNKRADALVKLGDIAQ 224
Query: 239 ALALMDEAREVVSLIQERYPQGYWARYVETLV 270
++A++ + + YP A + +
Sbjct: 225 RNNNAEQAKKYYQQVVDEYPTSASANLAKERL 256
Score = 39.0 bits (88), Expect = 0.73, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 29/79 (36%), Gaps = 3/79 (3%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
LK+ +Y AI FQ +Y D+ + L + Y A +A + +
Sbjct: 143 YQNSVDLILKKRDYTGAIAAFQQFQKDYPDSTFTPNSHYWLGQLYFAKKQDKDAVKSFAA 202
Query: 253 IQERYPQGYWARYVETLVK 271
+ Y + + LVK
Sbjct: 203 VVA-YKDSN--KRADALVK 218
>gi|153838050|ref|ZP_01990717.1| Tol system periplasmic component YbgF [Vibrio parahaemolyticus
AQ3810]
gi|149748584|gb|EDM59443.1| Tol system periplasmic component YbgF [Vibrio parahaemolyticus
AQ3810]
Length = 251
Score = 42.1 bits (96), Expect = 0.075, Method: Composition-based stats.
Identities = 12/93 (12%), Positives = 31/93 (33%)
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
+F + +A + + + +Y D+ +A+ +L E
Sbjct: 159 QFQKDYPGSTYSANSHYWLGQLYFAKKQDKDAVKSFAAVVSYKDSNKRADALLKLGEIAE 218
Query: 239 ALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+A++ + + YP A+ + +K
Sbjct: 219 RNNNAAQAKKYYQQVVDEYPGSASAKLAGSKLK 251
>gi|296126807|ref|YP_003634059.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563]
gi|296018623|gb|ADG71860.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563]
Length = 452
Score = 42.1 bits (96), Expect = 0.076, Method: Composition-based stats.
Identities = 24/231 (10%), Positives = 67/231 (29%), Gaps = 26/231 (11%)
Query: 44 RDVYLDSVTDVRYQ-REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102
+ + + + +++ A ++++ A ++ +P + + +
Sbjct: 231 ENTQAKAPVESNPETIALFKSAEDLKNIKDYNNAVSTYSNVISQYPKSKYS-------VY 283
Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
+ G Y ++ +++ + + V + + Y
Sbjct: 284 SYFRIGDIYNQNKDYNNAFDMYKQASSLENANNNEKAAALYSMGVVKKSENKHDEAIAYF 343
Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
+ ++ +Y+++ + EI G A P + L +
Sbjct: 344 NDVMNKYSST--------------SMYGNAAYEIADSLKTLGRISDAAPILEKSLEGNNK 389
Query: 223 AEHAEEAMARLVEAYVALALM----DEAREVVSLIQERYPQGYWARYVETL 269
+A+ L E Y D+A + + YP A+Y
Sbjct: 390 FSKRGDAILLLAEVYEKGDNNTRDFDKAYQTYNQYLAEYPTSSKAKYANDR 440
>gi|21226280|ref|NP_632202.1| hypothetical protein MM_0178 [Methanosarcina mazei Go1]
gi|20904523|gb|AAM29874.1| conserved protein [Methanosarcina mazei Go1]
Length = 1711
Score = 42.1 bits (96), Expect = 0.076, Method: Composition-based stats.
Identities = 17/201 (8%), Positives = 54/201 (26%)
Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
+ ++ +Y A++ + + +A F Q P + L + + + +
Sbjct: 1450 EPEHEEALYNMALVLFNLEEYEEAARTFEQLLETSPEDPESLNYLGLCLLELDNLKEALK 1509
Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
A + + E+ + + + + L ++ +
Sbjct: 1510 AFEKAALFNPKNEEALYNAATTLIKLNRAQESLGYFDRILEISPDNLDVLNYKGVIFCML 1569
Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232
+ A + I + + + S E+++
Sbjct: 1570 DQYREALRAFDGVLKRDPENIKAIYNVGVVCFKQKLYETAARAFKEALSINPWHEQSLRY 1629
Query: 233 LVEAYVALALMDEAREVVSLI 253
L + + +EA + +
Sbjct: 1630 LGISLAKIGEYEEALKAFEKL 1650
Score = 38.2 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 24/218 (11%), Positives = 53/218 (24%), Gaps = 3/218 (1%)
Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
D + + + + + + LK + A + F + P A +
Sbjct: 1269 DGEESKIGEPELEDALTKIGLSQLKTGKYEDACDTFEKVLEKNPMAADIWYLSGLVMRGL 1328
Query: 105 YSAGKYQQAASLGEEY-ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
+A + E + + + + + +
Sbjct: 1329 DQNEDAVEAFNRALEIKPDLRAAQEQKGLALLSLCRYEEARDAFSSVLEESPENADVLYN 1388
Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR--FQLVLANYS 221
R V + + A+ V + + Y L Q +
Sbjct: 1389 RAVASFKTLNFEDAAKDLEKVLLFAPDSPDYTEACYMLGIASIELQDYERALQALDMVLE 1448
Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
EEA+ + L +EA + E P+
Sbjct: 1449 WEPEHEEALYNMALVLFNLEEYEEAARTFEQLLETSPE 1486
Score = 37.1 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 25/208 (12%), Positives = 54/208 (25%), Gaps = 7/208 (3%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
+ Y K + LK +NF +A + F+ + A +
Sbjct: 568 TEKPASREAWYRKGLALLKLENFEEAVKAFDAVATKDADYEDAGVLKGFAQMKLKECASA 627
Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT---KLMLQYMSRIVE 167
+ E + + + + R +Y ++ +
Sbjct: 628 LETFERVLEKKPDSDTAWYYRGMILYTLQRQEEAAKAFESASRLNPGLYTAFEYRAKCLF 687
Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA- 226
A V + + + + + A+ +L + + +
Sbjct: 688 ETGQYEAAFEAFEAVLEKDPENLSALEKRAICLFELKKNKEAVDALSTLLESDPERKDTK 747
Query: 227 ---EEAMARLVEAYVALALMDEAREVVS 251
EEA RL Y L + A E+
Sbjct: 748 LRLEEAKLRLGIEYFELGQYENALELFE 775
Score = 36.7 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 29/201 (14%), Positives = 61/201 (30%), Gaps = 6/201 (2%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
+ L ++ N+ A + F + + P + A ++ + + +A
Sbjct: 545 RRGKLAMEVGNYETALQAFERILTEKPASREAWYRKGLALLKLENFEEAVKAFDAVATKD 604
Query: 122 TQYPES---KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
Y ++ K + S + V + + Y I+ A
Sbjct: 605 ADYEDAGVLKGFAQMKLKECASALETFERVLEKKPDSDTAWYYRGMILYTLQRQEEAAKA 664
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
+ L + + G+Y AA F+ VL + A+ +
Sbjct: 665 FESASRLNPGLYTAFEYRAKCLFETGQYEAAFEAFEAVLEKDPENLS---ALEKRAICLF 721
Query: 239 ALALMDEAREVVSLIQERYPQ 259
L EA + +S + E P+
Sbjct: 722 ELKKNKEAVDALSTLLESDPE 742
Score = 35.9 bits (80), Expect = 6.3, Method: Composition-based stats.
Identities = 32/199 (16%), Positives = 60/199 (30%), Gaps = 8/199 (4%)
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
Y K + F + NF++A E F + +S F +A E
Sbjct: 1048 YLKGLAFFRIGNFTEALEGFGKALELGCQKPDIPYYTGLSCFETGDYAGALKAFDRLPEE 1107
Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
TQ P+ + + + V + + L + N P
Sbjct: 1108 GTQDPDVLQKRALALFELGRQEEAVSAVNFLLELSAENLT-----IGEKGNEPEGNEPEK 1162
Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
+ ++ G+ A+ + + S ++ E + A + L
Sbjct: 1163 SPEENNRICQELLEKFASALIELGKPEEALLPLEKLAREGSASK---ETLYDRGIALLEL 1219
Query: 241 ALMDEAREVVSLIQERYPQ 259
+EA E+ S + E YP
Sbjct: 1220 GRQEEAFEIFSDLIEIYPD 1238
Score = 35.5 bits (79), Expect = 8.3, Method: Composition-based stats.
Identities = 32/245 (13%), Positives = 78/245 (31%), Gaps = 13/245 (5%)
Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99
+ + +Y + + +Y K ++F++++ + KA E F + P +
Sbjct: 778 NEKAEGIYEKTRDPQKPNSVLYWKGLVFIRQEAYEKAVEAFKGITDQDPNFAEGWYFTGL 837
Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
S + +A E + ++ ++ Y + + + ++A K
Sbjct: 838 SCSKLGRYEEASEAFKKALEINSALRDTHDICYQLGISNFELGKFEEALKAFEKAFKTTP 897
Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219
YT+ Y+K + E+ E +A + +
Sbjct: 898 DREQITETTYTDLIYMKSLSLLRLGRYKEAEVGFKEVIFRDSDNAEALAHLSTACFKQEH 957
Query: 220 Y-----------SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA--RYV 266
Y S + + R A AL + ++ ++ L+ + P +A +
Sbjct: 958 YEEALEIFEKVLSQTPERKTVLFRKGVALKALGKIQDSLDIFDLVLKLKPDCSYALEQRG 1017
Query: 267 ETLVK 271
L +
Sbjct: 1018 YALFE 1022
>gi|254229962|ref|ZP_04923364.1| Tol system periplasmic component YbgF [Vibrio sp. Ex25]
gi|262394682|ref|YP_003286536.1| TPR repeat-containing protein [Vibrio sp. Ex25]
gi|151937531|gb|EDN56387.1| Tol system periplasmic component YbgF [Vibrio sp. Ex25]
gi|262338276|gb|ACY52071.1| TPR repeat-containing protein [Vibrio sp. Ex25]
Length = 250
Score = 42.1 bits (96), Expect = 0.076, Method: Composition-based stats.
Identities = 11/92 (11%), Positives = 30/92 (32%)
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
+F + +A + + + +Y D+ +A+ +L E
Sbjct: 159 QFQKDYPDSTYSANSHYWLGQLYFAKKQDKDAVKSFAAVVSYKDSNKRADALLKLGEIAE 218
Query: 239 ALALMDEAREVVSLIQERYPQGYWARYVETLV 270
+A++ + + YP A+ + +
Sbjct: 219 RNNNAAQAKKYYQQVVDEYPGSASAKLASSKL 250
>gi|264677755|ref|YP_003277661.1| hypothetical protein CtCNB1_1619 [Comamonas testosteroni CNB-2]
gi|262208267|gb|ACY32365.1| hypothetical conserved protein [Comamonas testosteroni CNB-2]
Length = 253
Score = 42.1 bits (96), Expect = 0.077, Method: Composition-based stats.
Identities = 22/122 (18%), Positives = 40/122 (32%), Gaps = 14/122 (11%)
Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
+ Q + + ++ S Y RF++ G +Y
Sbjct: 142 MFRSGKFPEAGQAFAAFLRQWPKSGYTPSVRFWL--------------GNSQYATRDYKN 187
Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
AI F+ V+ N A EA + V L AR+ + + + YP A ++
Sbjct: 188 AIANFRSVMTNAPMHARAPEAALSIANCLVELKDTKAARKTLEELLQAYPNSEAAGIAKS 247
Query: 269 LV 270
+
Sbjct: 248 KL 249
>gi|329954184|ref|ZP_08295279.1| tetratricopeptide repeat protein [Bacteroides clarus YIT 12056]
gi|328528161|gb|EGF55141.1| tetratricopeptide repeat protein [Bacteroides clarus YIT 12056]
Length = 584
Score = 42.1 bits (96), Expect = 0.077, Method: Composition-based stats.
Identities = 29/252 (11%), Positives = 64/252 (25%), Gaps = 6/252 (2%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQRE------VYEKAVLFLKEQNFS 74
K I +A V + + V + + +A ++++
Sbjct: 4 KNIKIIGCLLACVLFVSCGTSRQKMKVRPAEAVVLTPEQQRKYDYFFLEAARLKVQKDYD 63
Query: 75 KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
A++ C P A A L A + Q A E
Sbjct: 64 AAFDLLQHCLTINPNASSALYELAQYYLYLKQAPQGQAALEKAVENDPDNYWYSQGLANL 123
Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
Y + ++ + L + +++ Y + ++ E
Sbjct: 124 YQQQDEKEKAMKLLEDMSVRFTDKLDPLYALLDIYNRQEQYDKVIATLNRIEGKMGKSEQ 183
Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
+ + F + + ++ L + Y+ +EA V +
Sbjct: 184 LSMEKFRIYLQMKDNKNAFHEIESLVAEYPMDSRYQVVLGDVYMQNGKKEEAYSVYRKVL 243
Query: 255 ERYPQGYWARYV 266
+ P A Y
Sbjct: 244 DAEPDNAMAMYS 255
>gi|225849252|ref|YP_002729416.1| DNA uptake lipoprotein [Sulfurihydrogenibium azorense Az-Fu1]
gi|225644324|gb|ACN99374.1| DNA uptake lipoprotein [Sulfurihydrogenibium azorense Az-Fu1]
Length = 308
Score = 42.1 bits (96), Expect = 0.077, Method: Composition-based stats.
Identities = 39/214 (18%), Positives = 74/214 (34%), Gaps = 12/214 (5%)
Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
+F I F+ ++ V + ++ K + ++ ++ KA E
Sbjct: 2 KKIVFLGILSAFMFSCGSKTEVYVGQEKLS----------KGLTLYQKGDYKKAKEELKN 51
Query: 83 CSRDFPFAGVARKSLLMS--AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
A+ A Y+ +Y A EE+I +P S + Y + MS
Sbjct: 52 AIFKSEGLTPAQLMEARFALADSYYNREEYVDAIVEFEEFIALFPTSPKIPEALYKLAMS 111
Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
Y + D D + I++ Y +S YV A+ + A + I Y
Sbjct: 112 YLFVSPDYKRDLTYVNKAEEKAQEIIDNYPDSKYVAAAKEIIKKVNEIKAKHTLYIAETY 171
Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234
K G+ +A ++ + Y D + + +L
Sbjct: 172 EKYGKPYSAAVYYEEAYSKYKDYIQKDYVIYKLA 205
Score = 39.0 bits (88), Expect = 0.62, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 39/92 (42%), Gaps = 8/92 (8%)
Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV--------A 239
QL + Y R EYV AI F+ +A + + EA+ +L +Y+
Sbjct: 63 QLMEARFALADSYYNREEYVDAIVEFEEFIALFPTSPKIPEALYKLAMSYLFVSPDYKRD 122
Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETLVK 271
L +++A E I + YP + + ++K
Sbjct: 123 LTYVNKAEEKAQEIIDNYPDSKYVAAAKEIIK 154
>gi|254282190|ref|ZP_04957158.1| tetratricopeptide TPR_2 repeat protein [gamma proteobacterium
NOR51-B]
gi|219678393|gb|EED34742.1| tetratricopeptide TPR_2 repeat protein [gamma proteobacterium
NOR51-B]
Length = 304
Score = 42.1 bits (96), Expect = 0.077, Method: Composition-based stats.
Identities = 12/81 (14%), Positives = 23/81 (28%), Gaps = 3/81 (3%)
Query: 180 FYVTVGRNQLAAKEVEIGRYYL---KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
F + A E A F+L+L Y + +A+ +L
Sbjct: 205 FLGDYPFGRYAPNAHYWLGELYLVVDPAEPEMARQSFKLLLDQYPNNPKIPDALYKLGRV 264
Query: 237 YVALALMDEAREVVSLIQERY 257
+ ++E + Y
Sbjct: 265 HYIKGNRQRSKEYLDRAIREY 285
Score = 40.9 bits (93), Expect = 0.20, Method: Composition-based stats.
Identities = 16/70 (22%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL--ALMDEAREVVS 251
+ +K+ + A+ F+ L +Y +A A L E Y+ + A + AR+
Sbjct: 183 YQSAYELVKQRRFAPAVSAFKAFLGDYPFGRYAPNAHYWLGELYLVVDPAEPEMARQSFK 242
Query: 252 LIQERYPQGY 261
L+ ++YP
Sbjct: 243 LLLDQYPNNP 252
>gi|315186432|gb|EFU20192.1| Tetratricopeptide TPR_1 repeat-containing protein [Spirochaeta
thermophila DSM 6578]
Length = 225
Score = 42.1 bits (96), Expect = 0.079, Method: Composition-based stats.
Identities = 18/215 (8%), Positives = 48/215 (22%), Gaps = 5/215 (2%)
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
+++ +E + +A + F + + + + + +
Sbjct: 6 FQRGKQLFQEGKYREALQEFLSSDGTEGLSPSDQAYYMGLCYARLGEYEEALLYLEQVLT 65
Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV----- 175
+P + + S + + + + + + Y+
Sbjct: 66 TDTHPLKRYQVRMLIGYIYSLTERYKLAQLEFERVVEEGFESATVYNALAHVRYMLGELR 125
Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
+ YL + V + A L
Sbjct: 126 ESLSAAEKALSLDPDNPSALNSMGYLLAEQGVRLSLALKYCRKAVQKAPRNPAYQDSLAW 185
Query: 236 AYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
A EAR V+ + P R ++
Sbjct: 186 ALYKNGQFAEARNVIRVAHALAPDSPTIREHYEII 220
>gi|163782042|ref|ZP_02177041.1| threonine synthase [Hydrogenivirga sp. 128-5-R1-1]
gi|159882574|gb|EDP76079.1| threonine synthase [Hydrogenivirga sp. 128-5-R1-1]
Length = 261
Score = 42.1 bits (96), Expect = 0.079, Method: Composition-based stats.
Identities = 15/112 (13%), Positives = 34/112 (30%), Gaps = 9/112 (8%)
Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
++++ + Y A F++ +L + Y +
Sbjct: 152 EARDAFLNFIKKFPENKYTDNAFFWIGKIYQELGDLKRAEEIYKSLVDKCERGRL----- 206
Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
D +A +L+ V ++EA S++ +R+P A
Sbjct: 207 ----PDCNKLPDAYFQLMRINVDRGNVEEANRYYSILIDRFPTSDAAVRARE 254
Score = 37.1 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 8/65 (12%), Positives = 21/65 (32%)
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
A + + A F + + + ++ + A + + Y L + A E
Sbjct: 133 DAETAYKKAIELYSVKKLYEARDAFLNFIKKFPENKYTDNAFFWIGKIYQELGDLKRAEE 192
Query: 249 VVSLI 253
+ +
Sbjct: 193 IYKSL 197
>gi|328947737|ref|YP_004365074.1| hypothetical protein Tresu_0849 [Treponema succinifaciens DSM 2489]
gi|328448061|gb|AEB13777.1| Tetratricopeptide TPR_2 repeat-containing protein [Treponema
succinifaciens DSM 2489]
Length = 887
Score = 42.1 bits (96), Expect = 0.079, Method: Composition-based stats.
Identities = 25/212 (11%), Positives = 69/212 (32%), Gaps = 6/212 (2%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
++D + Y F + A FN+ + P +A + ++
Sbjct: 104 ISDESNVQSFYNLGFTFKLMGKYDDALNCFNRVVEENPEDVLAFNHIGSIYALKNQNKDA 163
Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP---YDQRATKLMLQYMSRIVE 167
+ G + +P Y + + + + ++ + ++
Sbjct: 164 VSSYLRGLKIDPNHPILHLNLAKSYDALGEFEKAQAEYEAALKTKPGWLEAIENYADLLL 223
Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
+ + + + AA ++G Y K+ ++ A + L +
Sbjct: 224 KKNKTRNAGELVRHALNLNPKDAAMHTKLGDVYTKQSDFDNAEVEYNEALKIRPEFP--- 280
Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
+A++ L AY + ++A E++ ++ P+
Sbjct: 281 KALSGLASAYESTGRNEDALEIMGRMENASPE 312
>gi|156717228|ref|NP_001096156.1| transmembrane and tetratricopeptide repeat containing 2 [Xenopus
(Silurana) tropicalis]
gi|134024146|gb|AAI36040.1| tmtc2 protein [Xenopus (Silurana) tropicalis]
Length = 836
Score = 42.1 bits (96), Expect = 0.080, Method: Composition-based stats.
Identities = 19/226 (8%), Positives = 49/226 (21%), Gaps = 10/226 (4%)
Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
++ + +Y L+ ++ + A + + + P +
Sbjct: 587 CSEIPDENLKDPNAHKSSVTSCLYNLGKLYHEQGQYEDALIVYKEAIQKMPRQFSPQSLY 646
Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD------ 151
M +A E + P+ Y + + Y
Sbjct: 647 NMMGEAYMRLNLVSEAEHWYTESLKSKPDHIPAHLTYGKLLTLTGRKNEAERYFLKAIQL 706
Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
+ + + N + AA
Sbjct: 707 DPNKGNCYMHYGQFLLEEGRLLEAAEMAKKAAELDNSEFDVVFNAAHMLRQASLNEAAEK 766
Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR-EVVSLIQER 256
++L + A+ L ++EA + +Q +
Sbjct: 767 YYKLAAGLRPNYPA---ALMNLGAILHLNGKLEEAESNYLRALQLK 809
>gi|119944500|ref|YP_942180.1| TPR repeat-containing protein [Psychromonas ingrahamii 37]
gi|119863104|gb|ABM02581.1| Tetratricopeptide TPR_2 repeat protein [Psychromonas ingrahamii 37]
Length = 255
Score = 42.1 bits (96), Expect = 0.080, Method: Composition-based stats.
Identities = 29/266 (10%), Positives = 72/266 (27%), Gaps = 28/266 (10%)
Query: 19 LYKFALTIFFSIAVCFLV------------GWERQSSRDVYLDSVTDVRYQREVYEKAVL 66
+ K L + +A F G + V + + + + EK
Sbjct: 1 MKKNNLQMAIILATFFSSSTFATAPVSDVTGSASGVTGSVSVVTAAEGVSVEKQLEKFAR 60
Query: 67 FLKEQNFSKAY--EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY 124
L+ +N + Q S++ + + + + ++
Sbjct: 61 LLESRNRMQIIMQNQLTQLSKELREIKGGMELFEHKISEIENRQRNLYQLVDQPKAVSTP 120
Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184
+ + Q D+ + + V Y S Y
Sbjct: 121 TTANSTATASSAGEQLAYQAAVDLVLVNKDYDQAITAFEAFVIDYPESEY---------- 170
Query: 185 GRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244
+A +G ++ + A F V + ++ +++ ++ L +
Sbjct: 171 ----IANSHYWLGLVLYQQKKRKEARVAFLTVSEKFPESVKRADSLFKIGIIDEYLGELA 226
Query: 245 EAREVVSLIQERYPQGYWARYVETLV 270
A+E + + YP A + +
Sbjct: 227 SAKEFYQKVLKEYPNSSAAGLAQKQL 252
>gi|126642009|ref|YP_001084993.1| putative signal peptide [Acinetobacter baumannii ATCC 17978]
Length = 239
Score = 42.1 bits (96), Expect = 0.081, Method: Composition-based stats.
Identities = 18/114 (15%), Positives = 38/114 (33%), Gaps = 13/114 (11%)
Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
K + M ++ + NS Y A F++ Y A + +
Sbjct: 138 KKAIAPMQNFIKNHPNSIYTGNAYFWLAEF------------HLATDPVNYNEAKKNYNV 185
Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMD-EAREVVSLIQERYPQGYWARYVET 268
V Y ++ A A+ +L + A + + + +YP+ A++
Sbjct: 186 VANQYPNSSKAPRALYQLYSIAKDVDKNTVSANQYKNKLLSQYPKSEEAKFFNK 239
Score = 36.7 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA--LMDEAREVVSLIQERYP 258
K+G AI Q + N+ ++ + A L E ++A +EA++ +++ +YP
Sbjct: 132 YKQGGAKKAIAPMQNFIKNHPNSIYTGNAYFWLAEFHLATDPVNYNEAKKNYNVVANQYP 191
Query: 259 QG 260
Sbjct: 192 NS 193
>gi|46580475|ref|YP_011283.1| TPR domain-containing protein [Desulfovibrio vulgaris str.
Hildenborough]
gi|46449894|gb|AAS96543.1| TPR domain protein [Desulfovibrio vulgaris str. Hildenborough]
gi|311234217|gb|ADP87071.1| tol-pal system protein YbgF [Desulfovibrio vulgaris RCH1]
Length = 257
Score = 42.1 bits (96), Expect = 0.081, Method: Composition-based stats.
Identities = 38/244 (15%), Positives = 71/244 (29%), Gaps = 5/244 (2%)
Query: 29 SIAVCFLVGWERQSSRDVYL---DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85
+ VC G QS+ DV L + T + A + ++ S +
Sbjct: 12 LLLVCACAGCAGQSATDVRLRGLEERTAALERSVAVRDAQVTSLDERTSATDATVDDLRE 71
Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
++ ++S ++ ++ +K V + +
Sbjct: 72 RVGRLEAEGRATVVSEREAAGTMGGRKVYPATSRPSSKASSTKPVARAVSATRPAAKPVA 131
Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
A K L + R + A G +
Sbjct: 132 TAAGGASAAYKEALALLERGRPEEARQRF--DAFIEAYPSDALQPNAHYWRGEALYAQRR 189
Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
Y AI F+ V+A+Y + A +++ + AY L + AR +QE+YP A
Sbjct: 190 YADAIIDFKDVVASYPKHQKASDSLLKAGMAYQRLNDEENARLQFKALQEQYPATPAAVL 249
Query: 266 VETL 269
Sbjct: 250 ARKR 253
>gi|95929126|ref|ZP_01311871.1| hypothetical protein Dace_2776 [Desulfuromonas acetoxidans DSM 684]
gi|95135027|gb|EAT16681.1| hypothetical protein Dace_2776 [Desulfuromonas acetoxidans DSM 684]
Length = 290
Score = 42.1 bits (96), Expect = 0.081, Method: Composition-based stats.
Identities = 14/74 (18%), Positives = 24/74 (32%)
Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
G+Y AI ++ L Y D A A + +Y+ + + + +
Sbjct: 30 FADSLFNEGDYFRAITEYKRYLYTYPDTPAAARAQLNIARSYLQAERWQDGEFALQRVID 89
Query: 256 RYPQGYWARYVETL 269
YP A L
Sbjct: 90 NYPNSDEADIARIL 103
>gi|329930344|ref|ZP_08283933.1| tetratricopeptide repeat protein [Paenibacillus sp. HGF5]
gi|328935070|gb|EGG31556.1| tetratricopeptide repeat protein [Paenibacillus sp. HGF5]
Length = 560
Score = 42.1 bits (96), Expect = 0.081, Method: Composition-based stats.
Identities = 27/189 (14%), Positives = 55/189 (29%), Gaps = 3/189 (1%)
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
+++AV L + KA +YF + P V ++ + E
Sbjct: 7 FDRAVRSLDRYQYDKALKYFRKAVEYEPDNPVNHCNMAGILSETGDYKASNDVLAHILEQ 66
Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
+ M + + Q++ E Y
Sbjct: 67 VDPLMTECYFYMANNYANMEQFEKAEEALVTYLEEDPNGQFLDEAEEMMELLHYELNRPA 126
Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
+ +++ E E R L+ G++ A+ + ++ + D A L AY +
Sbjct: 127 KLNRIKSREGVVEHEHARALLEEGKFAQAVKLLEEIVKDNPDFLA---ARNNLALAYYYM 183
Query: 241 ALMDEAREV 249
D A+
Sbjct: 184 GRFDTAKRT 192
>gi|194290405|ref|YP_002006312.1| periplasmic protein, associated to tol-pal complex [Cupriavidus
taiwanensis LMG 19424]
gi|193224240|emb|CAQ70249.1| periplasmic protein, associated to Tol-Pal complex [Cupriavidus
taiwanensis LMG 19424]
Length = 252
Score = 42.1 bits (96), Expect = 0.082, Method: Composition-based stats.
Identities = 16/124 (12%), Positives = 38/124 (30%), Gaps = 2/124 (1%)
Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
P ++ L+ + + + + Y LA +G + +Y
Sbjct: 128 QPGEKPEYDAALKQFQAGDFKSAGNSFSAFVKKYPQSPYLPLAQY--WLGNSLYAQRDYK 185
Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
+ Q ++ +AM + + AR+ + + +YP A+
Sbjct: 186 GSTFVLQNMVNANPTHPKVPDAMIAIANNQLESGQKAAARKTLEQVVAKYPGTEGAQAAS 245
Query: 268 TLVK 271
+K
Sbjct: 246 NRLK 249
Score = 36.7 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 10/74 (13%), Positives = 25/74 (33%)
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
Y+ A+ + +F A F+ + +P + + Y+ Y+ + + +
Sbjct: 135 YDAALKQFQAGDFKSAGNSFSAFVKKYPQSPYLPLAQYWLGNSLYAQRDYKGSTFVLQNM 194
Query: 121 ITQYPESKNVDYVY 134
+ P V
Sbjct: 195 VNANPTHPKVPDAM 208
>gi|332706898|ref|ZP_08426959.1| putative NTPase, NACHT family protein [Lyngbya majuscula 3L]
gi|332354782|gb|EGJ34261.1| putative NTPase, NACHT family protein [Lyngbya majuscula 3L]
Length = 1975
Score = 42.1 bits (96), Expect = 0.083, Method: Composition-based stats.
Identities = 15/214 (7%), Positives = 51/214 (23%), Gaps = 12/214 (5%)
Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
+ Y+ ++ +S A + + Q + + + ++ +
Sbjct: 1263 QPKIASAYYQLGRIYQDWGKYSDAIKSYQQSRELYQQLDLQKDVANQWYWLGNCYQESGN 1322
Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM-LQYMSRIVERYTN 171
+ + + +D + + + + Q + ++
Sbjct: 1323 YQEAVDCQLKTLAIRQQLDDQPRIALAYNQLGRIYQGWGKYDQAIASHQQSRELYDQLDK 1382
Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231
V + +++ + + + D A
Sbjct: 1383 QKDVADSWYWLAICYRNWGKYQQAVDCQLKDLAIRQQL-----------DDQPRIANAYY 1431
Query: 232 RLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
+L Y ++A +E Y Q +
Sbjct: 1432 QLGRIYRDWGKYEDAIAYYQQSRELYQQLDLQKD 1465
Score = 40.2 bits (91), Expect = 0.29, Method: Composition-based stats.
Identities = 18/221 (8%), Positives = 56/221 (25%), Gaps = 14/221 (6%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
R + ++ + +A Y Q + + ++ +
Sbjct: 1581 DDQPRIALAYWSLGRIYQNWGKYDQAIRYHQQSRDLYQQLDKQKDVADSWYWLADCYRNW 1640
Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
+ + + + +D + Y + Q + SR +
Sbjct: 1641 GKYQQAVDYQLKTLAIRQQLDDQPRIALAYYQLGRIYESWGQYENAIASYQQSRELYDQL 1700
Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS--------- 221
+ ++ Q + YY + + + + + Y
Sbjct: 1701 DLQKNVANQWRWLGDCYQELGDYSKAIDYYQQSLNLHQQLGQNEYIANRYRKIGNSQRLL 1760
Query: 222 --DAEHAEEAMARLVEAYVALAL---MDEAREVVSLIQERY 257
+ EA+ L + ++ + +A + + + Y
Sbjct: 1761 ARNTPDTTEALHLLNQGEQSIGQAIEISQANDYKANLAYNY 1801
Score = 36.7 bits (82), Expect = 3.6, Method: Composition-based stats.
Identities = 19/199 (9%), Positives = 48/199 (24%), Gaps = 10/199 (5%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
R Y+ ++ + A Y+ Q + + + ++
Sbjct: 1421 DDQPRIANAYYQLGRIYRDWGKYEDAIAYYQQSRELYQQLDLQKDVAHSWYWLAVCYRLS 1480
Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
+ + I + +D ++ + + + + + SR + +
Sbjct: 1481 SKYQQALDCEIKNLAICQQLDDQQWIALAYGHRGTIYKDWGKYSEAITYYQQSRDLYQQL 1540
Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
+ + V + K + LK + D A
Sbjct: 1541 GKEEIVATLWSGLVDCYRDWGKYQQALDCQLKTLAIRQQL----------DDQPRIALAY 1590
Query: 231 ARLVEAYVALALMDEAREV 249
L Y D+A
Sbjct: 1591 WSLGRIYQNWGKYDQAIRY 1609
>gi|224536558|ref|ZP_03677097.1| hypothetical protein BACCELL_01433 [Bacteroides cellulosilyticus
DSM 14838]
gi|224521814|gb|EEF90919.1| hypothetical protein BACCELL_01433 [Bacteroides cellulosilyticus
DSM 14838]
Length = 585
Score = 42.1 bits (96), Expect = 0.083, Method: Composition-based stats.
Identities = 24/257 (9%), Positives = 62/257 (24%), Gaps = 9/257 (3%)
Query: 19 LYKFALTIFFSIAVCFLVGWER---------QSSRDVYLDSVTDVRYQREVYEKAVLFLK 69
+ + + L+ + ++ + + R + +A
Sbjct: 1 MKMKFKIVSLFVLCAILISCGTSRQGGKKQRKGTKAQVVLTPEQQRKYDYFFLEASRLKM 60
Query: 70 EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129
+ ++S A++ C P A A + + Q A E
Sbjct: 61 KDDYSAAFDLLQHCLTINPNASSALYEISQYYMYLKQVPQGQAALEKAVENDPDNYWYSQ 120
Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
Y + + + + +++ Y + ++
Sbjct: 121 GLASLYQQQNEMQKATNLLESMATRFSDRMDPLYSLLDIYNRLEEYDNVITTLNRLEEKM 180
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
E + + F+ + + + L + Y+ DEA +
Sbjct: 181 GKNEQLSMEKFRIYLQKKDNQSAFREIESLVEEYPMDMRYQVILGDVYMQNDKKDEAYNI 240
Query: 250 VSLIQERYPQGYWARYV 266
+ P A Y
Sbjct: 241 YKKVLATEPDNAMAMYS 257
>gi|120602205|ref|YP_966605.1| TPR repeat-containing protein [Desulfovibrio vulgaris DP4]
gi|120562434|gb|ABM28178.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio vulgaris DP4]
Length = 257
Score = 42.1 bits (96), Expect = 0.083, Method: Composition-based stats.
Identities = 38/244 (15%), Positives = 71/244 (29%), Gaps = 5/244 (2%)
Query: 29 SIAVCFLVGWERQSSRDVYL---DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85
+ VC G QS+ DV L + T + A + ++ S +
Sbjct: 12 LLLVCACAGCAGQSATDVRLRGLEERTAALERSVAVRDAQVTSLDERTSATDATVDDLRE 71
Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
++ ++S ++ ++ +K V + +
Sbjct: 72 RVGRLEAEGRAAVVSEREAAGTMGGRKVYPATSRPSSKASSTKPVARAVSATRPAAKPVA 131
Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
A K L + R + A G +
Sbjct: 132 TAAGGASAAYKEALALLERGRPEEARQRF--DAFIEAYPSDALQPNAHYWRGEALYAQRR 189
Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
Y AI F+ V+A+Y + A +++ + AY L + AR +QE+YP A
Sbjct: 190 YADAIIDFKDVVASYPKHQKASDSLLKAGMAYQRLNDEENARLQFKALQEQYPATPAAVL 249
Query: 266 VETL 269
Sbjct: 250 ARKR 253
>gi|323435988|ref|ZP_01049520.2| conserved hypothetical protein [Dokdonia donghaensis MED134]
gi|321496303|gb|EAQ39492.2| conserved hypothetical protein [Dokdonia donghaensis MED134]
Length = 597
Score = 42.1 bits (96), Expect = 0.083, Method: Composition-based stats.
Identities = 28/229 (12%), Positives = 70/229 (30%), Gaps = 3/229 (1%)
Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
+ + R E A + + ++ F++A Y++Q +++++ A
Sbjct: 363 KKSLKSPLRRFDEARLKMELADVLVLKEKFNQALIYYSQIQNKIKNNVISQEARFKVAQT 422
Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
Y ++ A + + D + L+ + M + +
Sbjct: 423 SYYKADFEWAEAQLNVLKAGATQLIANDALELLLVIRDNSMDDSLQTALKKYATASLRAY 482
Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
+ + Y V G + + + ++ A + ++ YSD
Sbjct: 483 QNKTEEAITLY--DDILEVHKGEKIEDEALLSQAKLLEAKKDFKKAEKNYLTIIEYYSDG 540
Query: 224 EHAEEAMARLVEAYVA-LALMDEAREVVSLIQERYPQGYWARYVETLVK 271
A++A RL Y L ++A+ I + + +
Sbjct: 541 VLADDAYYRLARLYEGPLNEPEKAKNNYERIIFDLADSIYYVEAQKRFR 589
>gi|255321986|ref|ZP_05363136.1| TPR repeat-containing protein [Campylobacter showae RM3277]
gi|255301090|gb|EET80357.1| TPR repeat-containing protein [Campylobacter showae RM3277]
Length = 298
Score = 42.1 bits (96), Expect = 0.083, Method: Composition-based stats.
Identities = 13/88 (14%), Positives = 32/88 (36%)
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
Y+ ++ A +G ++ Y AI +Q + Y A++ + + ++
Sbjct: 207 YEYLLSKDHKPAMANFYLGEIAYQQKAYNNAIKYYQQSIQLYDKADYTPKLLYHTAISFD 266
Query: 239 ALALMDEAREVVSLIQERYPQGYWARYV 266
+ A + ++ YP A+
Sbjct: 267 KIKDTASANKFYKALKLGYPDSKEAKAA 294
>gi|221128805|ref|XP_002164066.1| PREDICTED: similar to TPR Domain containing protein, partial [Hydra
magnipapillata]
Length = 1375
Score = 42.1 bits (96), Expect = 0.083, Method: Composition-based stats.
Identities = 25/251 (9%), Positives = 64/251 (25%), Gaps = 11/251 (4%)
Query: 12 FEAWAYQLYKFALT------IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAV 65
+ + ++ K I S+ + S D + +
Sbjct: 829 YFKQSIKMDKLVYKKQDHPSIAISLFCLGDHCFSNDIECIKDTISNADYISADSLGVLGM 888
Query: 66 LFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP 125
++ + K +YF + ++ L A + G + I +
Sbjct: 889 YYINNGEYKKGIKYFKKSLETLEQIFGKNQAHLDIANSLHCIGVSYLGKEKPNKAIEYFK 948
Query: 126 ESKNVDYV-----YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
+ K++ + ++ L + ++ K
Sbjct: 949 KCKSMTESILGKYQFHPHIAINLNYLGENMINEDNNKALSCFLKSLDMLKQIFGEKHFNL 1008
Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
Y N L + Y L + ++ + + E++ + AY+
Sbjct: 1009 YTASCLNNLGTYYLNQKEYDLAISYFNESLIIRKHLYVRPEGHFEIAESLHSIGIAYLMK 1068
Query: 241 ALMDEAREVVS 251
D+A +
Sbjct: 1069 EDYDQALGYLK 1079
>gi|27365502|ref|NP_761030.1| tol-pal system protein YbgF [Vibrio vulnificus CMCP6]
gi|320155884|ref|YP_004188263.1| hypothetical protein VVM_02032 [Vibrio vulnificus MO6-24/O]
gi|27361650|gb|AAO10557.1| tol-pal system protein YbgF [Vibrio vulnificus CMCP6]
gi|319931196|gb|ADV86060.1| TPR repeat containing exported protein/ Putative periplasmic
protein contains a protein prenylyltransferase domain
[Vibrio vulnificus MO6-24/O]
Length = 260
Score = 42.1 bits (96), Expect = 0.083, Method: Composition-based stats.
Identities = 9/92 (9%), Positives = 30/92 (32%)
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
+F + A + + + +Y D+ +A+ +L +
Sbjct: 169 QFQKDFPDSNFAPNSHYWLGQLYFAQKQDKEAAKSFAAVVSYKDSNKRADALVKLGDIAA 228
Query: 239 ALALMDEAREVVSLIQERYPQGYWARYVETLV 270
++A++ + +P A+ ++ +
Sbjct: 229 RNNNPEQAKKYYQQAIDEHPGSASAKVAKSKL 260
Score = 39.4 bits (89), Expect = 0.60, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 30/79 (37%), Gaps = 3/79 (3%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
LK+ +Y AI F+ ++ D+ A + L + Y A EA + +
Sbjct: 147 YQNAVDLILKKRDYAGAIAAFKQFQKDFPDSNFAPNSHYWLGQLYFAQKQDKEAAKSFAA 206
Query: 253 IQERYPQGYWARYVETLVK 271
+ Y + + LVK
Sbjct: 207 VVS-YKDSN--KRADALVK 222
>gi|22125250|ref|NP_668673.1| fimbrial biogenesis protein [Yersinia pestis KIM 10]
gi|45442519|ref|NP_994058.1| putative fimbrial biogenesis protein [Yersinia pestis biovar
Microtus str. 91001]
gi|108808315|ref|YP_652231.1| putative fimbrial biogenesis protein [Yersinia pestis Antiqua]
gi|108811420|ref|YP_647187.1| fimbrial biogenesis protein [Yersinia pestis Nepal516]
gi|145599498|ref|YP_001163574.1| fimbrial biogenesis protein [Yersinia pestis Pestoides F]
gi|149365341|ref|ZP_01887376.1| putative fimbrial biogenesis protein [Yersinia pestis CA88-4125]
gi|162418968|ref|YP_001605026.1| type IV pilus biogenesis/stability protein PilW [Yersinia pestis
Angola]
gi|165925883|ref|ZP_02221715.1| type IV pilus biogenesis/stability protein PilW [Yersinia pestis
biovar Orientalis str. F1991016]
gi|165937091|ref|ZP_02225656.1| type IV pilus biogenesis/stability protein PilW [Yersinia pestis
biovar Orientalis str. IP275]
gi|166008363|ref|ZP_02229261.1| type IV pilus biogenesis/stability protein PilW [Yersinia pestis
biovar Antiqua str. E1979001]
gi|166212386|ref|ZP_02238421.1| type IV pilus biogenesis/stability protein PilW [Yersinia pestis
biovar Antiqua str. B42003004]
gi|167398612|ref|ZP_02304136.1| type IV pilus biogenesis/stability protein PilW [Yersinia pestis
biovar Antiqua str. UG05-0454]
gi|167421166|ref|ZP_02312919.1| type IV pilus biogenesis/stability protein PilW [Yersinia pestis
biovar Orientalis str. MG05-1020]
gi|167423678|ref|ZP_02315431.1| type IV pilus biogenesis/stability protein PilW [Yersinia pestis
biovar Mediaevalis str. K1973002]
gi|167470722|ref|ZP_02335426.1| type IV pilus biogenesis/stability protein PilW [Yersinia pestis
FV-1]
gi|170023537|ref|YP_001720042.1| type IV pilus biogenesis/stability protein PilW [Yersinia
pseudotuberculosis YPIII]
gi|218929941|ref|YP_002347816.1| putative fimbrial biogenesis protein [Yersinia pestis CO92]
gi|229838461|ref|ZP_04458620.1| putative fimbrial biogenesis protein [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229895162|ref|ZP_04510338.1| putative fimbrial biogenesis protein [Yersinia pestis Pestoides A]
gi|229899028|ref|ZP_04514172.1| putative fimbrial biogenesis protein [Yersinia pestis biovar
Orientalis str. India 195]
gi|229901677|ref|ZP_04516799.1| putative fimbrial biogenesis protein [Yersinia pestis Nepal516]
gi|270489872|ref|ZP_06206946.1| type IV pilus biogenesis/stability protein PilW [Yersinia pestis
KIM D27]
gi|294504557|ref|YP_003568619.1| putative fimbrial biogenesis protein [Yersinia pestis Z176003]
gi|21958121|gb|AAM84924.1|AE013738_1 putative fimbrial biogenesis protein [Yersinia pestis KIM 10]
gi|45437384|gb|AAS62935.1| putative fimbrial biogenesis protein [Yersinia pestis biovar
Microtus str. 91001]
gi|108775068|gb|ABG17587.1| fimbrial biogenesis protein [Yersinia pestis Nepal516]
gi|108780228|gb|ABG14286.1| putative fimbrial biogenesis protein [Yersinia pestis Antiqua]
gi|115348552|emb|CAL21492.1| putative fimbrial biogenesis protein [Yersinia pestis CO92]
gi|145211194|gb|ABP40601.1| fimbrial biogenesis protein [Yersinia pestis Pestoides F]
gi|149291754|gb|EDM41828.1| putative fimbrial biogenesis protein [Yersinia pestis CA88-4125]
gi|162351783|gb|ABX85731.1| type IV pilus biogenesis/stability protein PilW [Yersinia pestis
Angola]
gi|165914954|gb|EDR33566.1| type IV pilus biogenesis/stability protein PilW [Yersinia pestis
biovar Orientalis str. IP275]
gi|165922087|gb|EDR39264.1| type IV pilus biogenesis/stability protein PilW [Yersinia pestis
biovar Orientalis str. F1991016]
gi|165992745|gb|EDR45046.1| type IV pilus biogenesis/stability protein PilW [Yersinia pestis
biovar Antiqua str. E1979001]
gi|166206317|gb|EDR50797.1| type IV pilus biogenesis/stability protein PilW [Yersinia pestis
biovar Antiqua str. B42003004]
gi|166960655|gb|EDR56676.1| type IV pilus biogenesis/stability protein PilW [Yersinia pestis
biovar Orientalis str. MG05-1020]
gi|167051116|gb|EDR62524.1| type IV pilus biogenesis/stability protein PilW [Yersinia pestis
biovar Antiqua str. UG05-0454]
gi|167057848|gb|EDR67594.1| type IV pilus biogenesis/stability protein PilW [Yersinia pestis
biovar Mediaevalis str. K1973002]
gi|169750071|gb|ACA67589.1| type IV pilus biogenesis/stability protein PilW [Yersinia
pseudotuberculosis YPIII]
gi|229681606|gb|EEO77700.1| putative fimbrial biogenesis protein [Yersinia pestis Nepal516]
gi|229687973|gb|EEO80045.1| putative fimbrial biogenesis protein [Yersinia pestis biovar
Orientalis str. India 195]
gi|229694827|gb|EEO84874.1| putative fimbrial biogenesis protein [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229701924|gb|EEO89947.1| putative fimbrial biogenesis protein [Yersinia pestis Pestoides A]
gi|262366545|gb|ACY63102.1| putative fimbrial biogenesis protein [Yersinia pestis D182038]
gi|270338376|gb|EFA49153.1| type IV pilus biogenesis/stability protein PilW [Yersinia pestis
KIM D27]
gi|294355016|gb|ADE65357.1| putative fimbrial biogenesis protein [Yersinia pestis Z176003]
gi|320016018|gb|ADV99589.1| putative fimbrial biogenesis protein [Yersinia pestis biovar
Medievalis str. Harbin 35]
Length = 249
Score = 42.1 bits (96), Expect = 0.083, Method: Composition-based stats.
Identities = 26/252 (10%), Positives = 62/252 (24%), Gaps = 17/252 (6%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
K + V L G + R + + +L + + + A +
Sbjct: 1 MKLTKLWRVCLVVSVLTGCSGTPPENTSQAVAGQTRL-----QLGLAYLAQGDLTAARKN 55
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
+ P + + A + +A+ N +
Sbjct: 56 LEKAVEADPQDYRTQLGMAFYAQRIG-----ENSAAEQRYQQAMKLAPGNGTVLNNYGAF 110
Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN------QLAAKE 193
+ Q + +L ++ + N+ Y R + +
Sbjct: 111 LCSLGQYVSAQQQFSAAALLPDYGQVADSLENAGYCFLRANQDKQARVLLSRALKYDPDK 170
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDA-EHAEEAMARLVEAYVALALMDEAREVVSL 252
E +R + QL+L Y + E++ + D +
Sbjct: 171 GEPLLAEAQRHFGEGNRAQAQLLLDVYQHTLPASAESLWLQIRFAALAGRQDSVQRYGKQ 230
Query: 253 IQERYPQGYWAR 264
+ +PQ +
Sbjct: 231 LARSFPQSKQYQ 242
>gi|188996909|ref|YP_001931160.1| Tetratricopeptide TPR_2 repeat protein [Sulfurihydrogenibium sp.
YO3AOP1]
gi|188931976|gb|ACD66606.1| Tetratricopeptide TPR_2 repeat protein [Sulfurihydrogenibium sp.
YO3AOP1]
Length = 311
Score = 42.1 bits (96), Expect = 0.084, Method: Composition-based stats.
Identities = 41/214 (19%), Positives = 69/214 (32%), Gaps = 11/214 (5%)
Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
+ F I+ ++ + + K + K+ + KA E
Sbjct: 2 KRFVVFLISGLVIISCADKGQKLYEGQEKL---------SKGLELYKKGEYKKAKEELKN 52
Query: 83 CSRDFPFAGVARKSLLMS--AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
A+ A Y+ +Y A EE+I +P S + Y + MS
Sbjct: 53 AIFKSQGLTPAQIMEARFALADSYYNREEYIDAIVEFEEFIALFPTSPRMPEALYKLAMS 112
Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
Y + D D + I+ Y +S YVK A+ + A + I Y
Sbjct: 113 YLFVSPDYKRDMTYVNKAQEKAEEIISSYPDSKYVKAAKEILKKINEIKAKHTLYIAETY 172
Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234
K G+ +A +Q NY D + +L
Sbjct: 173 EKYGKPYSASVYYQEAYTNYKDYIEKDYVAYKLA 206
Score = 39.4 bits (89), Expect = 0.60, Method: Composition-based stats.
Identities = 19/92 (20%), Positives = 40/92 (43%), Gaps = 8/92 (8%)
Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV--------A 239
Q+ + Y R EY+ AI F+ +A + + EA+ +L +Y+
Sbjct: 64 QIMEARFALADSYYNREEYIDAIVEFEEFIALFPTSPRMPEALYKLAMSYLFVSPDYKRD 123
Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+ +++A+E I YP + + + ++K
Sbjct: 124 MTYVNKAQEKAEEIISSYPDSKYVKAAKEILK 155
>gi|118365798|ref|XP_001016118.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89297885|gb|EAR95873.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 963
Score = 42.1 bits (96), Expect = 0.085, Method: Composition-based stats.
Identities = 29/237 (12%), Positives = 81/237 (34%), Gaps = 1/237 (0%)
Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQRE-VYEKAVLFLKEQNFSKAYEYFNQCS 84
I+ + FL + + + +L ++ + +++ + + F +A Y+ +
Sbjct: 642 IYLFLGSIFLKHNKMKQAEYYFLKTIESDPTNFQYLFQIGDQYCNFEKFEEARFYYQKAL 701
Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
P + L+ + S + QQ E + + + YY + +
Sbjct: 702 NLKPSSEEIILKLISVYKMCSSTQEIQQFLFEFLEKNPENQYAFTLIGGYYENIGKFTEA 761
Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204
+ + + +++ Y + ++ A+ Y +K+ E +
Sbjct: 762 KQYYLQALQINPDNFITICHLIQNYITTGEIENAKSYFEKLLKLKISKDEEYISIGTFQV 821
Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
++ Q L +A +L ++Y+ + +EA++ + YP+
Sbjct: 822 QFQMIEESIQSFLKALEINPQNSQAHYKLAKSYMQIGRNEEAKKSYFKAFKMYPESE 878
>gi|125974865|ref|YP_001038775.1| TPR repeat-containing protein [Clostridium thermocellum ATCC 27405]
gi|256003879|ref|ZP_05428866.1| Tetratricopeptide domain protein [Clostridium thermocellum DSM
2360]
gi|281418669|ref|ZP_06249688.1| TPR repeat-containing protein [Clostridium thermocellum JW20]
gi|125715090|gb|ABN53582.1| TPR repeat domain containing protein [Clostridium thermocellum ATCC
27405]
gi|255992217|gb|EEU02312.1| Tetratricopeptide domain protein [Clostridium thermocellum DSM
2360]
gi|281407753|gb|EFB38012.1| TPR repeat-containing protein [Clostridium thermocellum JW20]
gi|316939076|gb|ADU73110.1| TPR repeat-containing protein [Clostridium thermocellum DSM 1313]
Length = 246
Score = 42.1 bits (96), Expect = 0.085, Method: Composition-based stats.
Identities = 16/96 (16%), Positives = 37/96 (38%)
Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
+ V + + G K +Y A+ L L Y + +A++ +
Sbjct: 146 EKYNDLVEKTYKKASELFYFEGYENYKNKKYSEAVKSLNLSLKLYDEDYYADDCYYFIAY 205
Query: 236 AYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+ + D+A+E ++ I YP + + + L++
Sbjct: 206 SEYNIGNYDKAKEALNTIINNYPDSSYYKDAKDLLR 241
>gi|303248292|ref|ZP_07334554.1| tol-pal system protein YbgF [Desulfovibrio fructosovorans JJ]
gi|302490317|gb|EFL50229.1| tol-pal system protein YbgF [Desulfovibrio fructosovorans JJ]
Length = 413
Score = 42.1 bits (96), Expect = 0.085, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 28/78 (35%)
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+G G+Y AI F+ V + A +A+ ++ A EAR
Sbjct: 332 YWVGEGAFSSGDYKTAIGDFEKVAKGWPGHSKAADALYKMAMAQEKTGDTAEARASYERY 391
Query: 254 QERYPQGYWARYVETLVK 271
+ YP A V ++
Sbjct: 392 LKDYPNAELAGLVRQKLQ 409
>gi|150015089|ref|YP_001307343.1| TPR repeat-containing protein [Clostridium beijerinckii NCIMB 8052]
gi|149901554|gb|ABR32387.1| Tetratricopeptide TPR_2 repeat protein [Clostridium beijerinckii
NCIMB 8052]
Length = 421
Score = 42.1 bits (96), Expect = 0.085, Method: Composition-based stats.
Identities = 15/97 (15%), Positives = 39/97 (40%), Gaps = 1/97 (1%)
Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
+Y+++ + G + K + AA+ +++ + Y + +
Sbjct: 316 NKYSDAKVFLDKAYAYCEGNSLKEHILFYRASSSSKLSDNSAAVKQYEEYYSQYPNGVYV 375
Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
EEA+ L ++ D++++ S++ YP +A
Sbjct: 376 EEALYNLALLNSSIN-KDKSKQYASILINNYPDSMYA 411
>gi|294674568|ref|YP_003575184.1| hypothetical protein PRU_1900 [Prevotella ruminicola 23]
gi|294474115|gb|ADE83504.1| tetratricopeptide repeat protein [Prevotella ruminicola 23]
Length = 939
Score = 42.1 bits (96), Expect = 0.086, Method: Composition-based stats.
Identities = 13/71 (18%), Positives = 23/71 (32%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
K + + + +Y D E+ EA L Y EA E ++
Sbjct: 565 FHAGIILKDKMERLNISERYLRRLTTDYPDYENNPEAWYHLWLLYSRQGRTTEAAECLAR 624
Query: 253 IQERYPQGYWA 263
++ YP +
Sbjct: 625 LKADYPDNEYT 635
>gi|269963140|ref|ZP_06177475.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269832104|gb|EEZ86228.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 251
Score = 42.1 bits (96), Expect = 0.087, Method: Composition-based stats.
Identities = 11/93 (11%), Positives = 31/93 (33%)
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
+F + +A + + + +Y D+ +A+ +L +
Sbjct: 159 QFQKDYPDSTYSANSHYWLGQLYFAKKQDKDAVKSFAAVVSYKDSNKRADALVKLGDIAE 218
Query: 239 ALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+A++ + + YP A+ + +K
Sbjct: 219 RNNNDAQAKKYYQQVVDEYPGSASAKVASSKLK 251
>gi|150024618|ref|YP_001295444.1| TPR domain-containing protein [Flavobacterium psychrophilum
JIP02/86]
gi|149771159|emb|CAL42626.1| TPR-domain containing protein [Flavobacterium psychrophilum
JIP02/86]
Length = 1003
Score = 42.1 bits (96), Expect = 0.087, Method: Composition-based stats.
Identities = 27/220 (12%), Positives = 59/220 (26%), Gaps = 23/220 (10%)
Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106
Y ++ V + Y A K + + +A +F + +
Sbjct: 491 YPEAKETVEFANVNYNMAYSHFKLKEYEQAGNFFQKYIEVSKDDKTRLTDAYLRL----- 545
Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
+ + Y + A + ++ +
Sbjct: 546 ----ADSKFVTTRYAAALEAYDKAIILKTFDADYAAFQKAICYGFMGKNDKKIAGFNQFL 601
Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
+ Y NS Y A F E+ Y E ++I + ++A S+ +
Sbjct: 602 KTYPNSQYRDDALF--------------ELANTYTTENETASSIKTYDQLIAENSNGSYV 647
Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
+A+ R Y ++A + +P+ A
Sbjct: 648 SKALLRQGLIYYNADKDEQALTKFKKVVANFPKSEEALEA 687
Score = 35.5 bits (79), Expect = 8.8, Method: Composition-based stats.
Identities = 21/238 (8%), Positives = 63/238 (26%), Gaps = 17/238 (7%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K+ L++F ++ F ++ Y KA+ ++ + A
Sbjct: 1 MQKYLLSLFVFLSFVFTS---------MFAQQSAIYTNDLAAYNKALSLFNDKQYQSAQI 51
Query: 79 YFNQCSRDFPF----AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
F++ ++ A S + + + + + + +
Sbjct: 52 LFDKVKQENSNPELEADCTYYSANCAIRLNQNNADEKMQNFVKNYPTSTKQNLAYTEVAT 111
Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
Y + + L + + S + + T N++ +
Sbjct: 112 YYFEQGKYPQALEWFDKVDESSLTEDELDKYNFYKGYSFFNSSKKKEATQYFNKVVNSQE 171
Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDA----EHAEEAMARLVEAYVALALMDEARE 248
+ G ++ + ++ E+ + L D+A +
Sbjct: 172 YGSQAKYYLGFLAYEGDDYKEATKYFDQVSGEEKYKEKLSYFQADMNFKLGKFDKAIQ 229
>gi|89072700|ref|ZP_01159265.1| Hypothetical fimbrial biogenesis and twitching motility protein
[Photobacterium sp. SKA34]
gi|89051520|gb|EAR56974.1| Hypothetical fimbrial biogenesis and twitching motility protein
[Photobacterium sp. SKA34]
Length = 252
Score = 42.1 bits (96), Expect = 0.087, Method: Composition-based stats.
Identities = 26/241 (10%), Positives = 75/241 (31%), Gaps = 9/241 (3%)
Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
+ G D + + + + +LK+ + +A E
Sbjct: 9 LLLCLLFTGCATVDVVDNGKEFDAKAASEARL-NLGLNYLKDGQWERARE---NLEIALK 64
Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
+ ++ + A+ G+ A + + + P++ +V Y + S + +
Sbjct: 65 YDPDYYRAQISMAYYYQKVGEKDAAEKMYRKALKHSPKNGDVLNNYGVFLCSEGRYDEAI 124
Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA-AKEVEIGRYYLKRGEYV 207
+A + Y+ K G + A + + R L+ +
Sbjct: 125 AAFVKAIEQPYYYLISASYENAGLCSRKQGNLETATGYFENALSHDPYRPRSMLQLAQVE 184
Query: 208 AAIPRFQ----LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
F+ + + +++ L++ + ++++ L++E+YP
Sbjct: 185 IESNNFKDARVQLFKFNKRYGYTADSLWLLIQLERQAGSLTQSKKYAILLKEKYPDSLQY 244
Query: 264 R 264
+
Sbjct: 245 Q 245
>gi|46446024|ref|YP_007389.1| hypothetical protein pc0390 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46399665|emb|CAF23114.1| hypothetical protein pc0390 [Candidatus Protochlamydia amoebophila
UWE25]
Length = 468
Score = 42.1 bits (96), Expect = 0.088, Method: Composition-based stats.
Identities = 30/238 (12%), Positives = 71/238 (29%), Gaps = 12/238 (5%)
Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
S + RY + Y K + +QN+ A + F + FP + A ++
Sbjct: 25 SKSRPFSSQQEAQRYLNQHYNKGCHYYNKQNWRFAMDEFEKVVYFFPNSTEAAEAYYYLG 84
Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
+ +Y A + +Y+T + + + + Y
Sbjct: 85 VCYFERKEYDFANNAFSKYLTSVEQPAFFEDAVHYKFCIAEHFRCGKRRRPLTFR----Y 140
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
+ + T + + + + K + AI +Q+++ +
Sbjct: 141 FPKWMSGQTIALTIYDEIIVAMPNSDMTVNALYSKAQLLQKMESFREAIETYQILIRRFP 200
Query: 222 DAEHAEEAMARLVEAYVALALMD--------EAREVVSLIQERYPQGYWARYVETLVK 271
E ++ E+Y ++ + A +E +P+ E V+
Sbjct: 201 KHEMTPLCYLKIAESYSQQSVYEFQNPDILALAELNSRKFKEEFPREEKTELAERYVQ 258
Score = 41.3 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 22/252 (8%), Positives = 60/252 (23%), Gaps = 18/252 (7%)
Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
+ V Y V + + + + A F++ ++
Sbjct: 58 FAMDEFEKVVYFFPNSTEAAEAYYYLGVCYFERKEYDFANNAFSKYLTSVEQPAFFEDAV 117
Query: 98 LMSAFVQYSA----------GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147
+ +Y G+ + V + ++
Sbjct: 118 HYKFCIAEHFRCGKRRRPLTFRYFPKWMSGQTIALTIYDEIIVAMPNSDMTVNALYSKAQ 177
Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY------YL 201
+ + + ++ ++ R+ + +Q + E +
Sbjct: 178 LLQKMESFREAIETYQILIRRFPKHEMTPLCYLKIAESYSQQSVYEFQNPDILALAELNS 237
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEA--MARLVEAYVALALMDEAREVVSLIQERYPQ 259
++ + + Y A + + Y + D A E +P
Sbjct: 238 RKFKEEFPREEKTELAERYVQRIKDMYAKGLCDMGLFYERMGHPDAAAIYFRSSIEEFPD 297
Query: 260 GYWARYVETLVK 271
Y A Y + +K
Sbjct: 298 TYVAGYCRSRLK 309
Score = 35.2 bits (78), Expect = 9.1, Method: Composition-based stats.
Identities = 12/188 (6%), Positives = 46/188 (24%), Gaps = 4/188 (2%)
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
F+ + + Q+ + E +
Sbjct: 18 FHSSVEASKSRPFSSQQEAQRYLNQHYNKGCHYYNKQNWRFAMDEFEKVVYFFPNSTEAA 77
Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
+ ++++ S+ + + + A Y +
Sbjct: 78 EAYYYLGVCYFERKEYDFANNAFSKYLTSVEQPAFFEDAVHYKFCIAEHFRCGKRRRPLT 137
Query: 200 YLKRGEYVAAIPR----FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
+ ++++ + ++ +++ A+ + + EA E ++
Sbjct: 138 FRYFPKWMSGQTIALTIYDEIIVAMPNSDMTVNALYSKAQLLQKMESFREAIETYQILIR 197
Query: 256 RYPQGYWA 263
R+P+
Sbjct: 198 RFPKHEMT 205
>gi|297183091|gb|ADI19235.1| hypothetical protein [uncultured delta proteobacterium
HF0200_14D13]
Length = 906
Score = 42.1 bits (96), Expect = 0.088, Method: Composition-based stats.
Identities = 13/62 (20%), Positives = 26/62 (41%)
Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
G + E+ A+ F+ ++ + + EE RL ++Y EA V S ++
Sbjct: 521 GFSSHEAKEWGKAVLFFKRLIDQHPQSPFREEGYYRLADSYYQQEKHSEADRVFSEYRKE 580
Query: 257 YP 258
+
Sbjct: 581 FQ 582
Score = 35.5 bits (79), Expect = 8.1, Method: Composition-based stats.
Identities = 21/195 (10%), Positives = 62/195 (31%), Gaps = 24/195 (12%)
Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
+ +++ ++ ++ + L+ ++F KA + + F + + +Q K
Sbjct: 437 NEWIWEQALFLRSTIELRSRDFKKADRHLQELLSKFEESNRRSEYYYWLGVLQLEQRKPL 496
Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
+ LG + G ++ ++ + + + R+++++
Sbjct: 497 RGVQLGMRQVRPDG----------PRGDGRWYVLGFSSHEAKEWGKAVLFFKRLIDQHPQ 546
Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231
SP+ + + + Q A F + +
Sbjct: 547 SPFREEGYYRLADSYYQQEKHS--------------EADRVFSEYRKEFQVLSKPVRVIE 592
Query: 232 RLVEAYVALALMDEA 246
R V+ + L ++EA
Sbjct: 593 RQVQNLMKLGKLEEA 607
>gi|221134412|ref|ZP_03560717.1| tetratricopeptide TPR_2 [Glaciecola sp. HTCC2999]
Length = 272
Score = 42.1 bits (96), Expect = 0.088, Method: Composition-based stats.
Identities = 13/76 (17%), Positives = 27/76 (35%)
Query: 185 GRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244
+ A LK+ + AAIP + + +Y + A L + +
Sbjct: 147 QSDNDAVDYKAAVDLILKQRDTAAAIPALEKFVDDYPQSRFKPNAHYWLGQIFYNGKNWQ 206
Query: 245 EAREVVSLIQERYPQG 260
+A++ + +YP
Sbjct: 207 DAKKHFGTLYTQYPTS 222
>gi|37680457|ref|NP_935066.1| hypothetical protein VV2273 [Vibrio vulnificus YJ016]
gi|37199205|dbj|BAC95037.1| conserved hypothetical protein [Vibrio vulnificus YJ016]
Length = 265
Score = 42.1 bits (96), Expect = 0.089, Method: Composition-based stats.
Identities = 9/92 (9%), Positives = 31/92 (33%)
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
+F + + A + + + +Y D+ +A+ +L +
Sbjct: 174 QFQIDFPDSNFAPNSHYWLGQLYFAQKQDKEAAKSFAAVVSYKDSNKRADALVKLGDIAA 233
Query: 239 ALALMDEAREVVSLIQERYPQGYWARYVETLV 270
++A++ + +P A+ ++ +
Sbjct: 234 RNNNPEQAKKYYQQAIDEHPGSASAKVAKSKL 265
Score = 38.6 bits (87), Expect = 0.89, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 30/79 (37%), Gaps = 3/79 (3%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
LK+ +Y AI F+ ++ D+ A + L + Y A EA + +
Sbjct: 152 YQNAVDLILKKRDYAGAIAAFKQFQIDFPDSNFAPNSHYWLGQLYFAQKQDKEAAKSFAA 211
Query: 253 IQERYPQGYWARYVETLVK 271
+ Y + + LVK
Sbjct: 212 VVS-YKDSN--KRADALVK 227
>gi|219847542|ref|YP_002461975.1| TPR repeat-containing protein [Chloroflexus aggregans DSM 9485]
gi|219541801|gb|ACL23539.1| TPR repeat-containing protein [Chloroflexus aggregans DSM 9485]
Length = 1112
Score = 42.1 bits (96), Expect = 0.090, Method: Composition-based stats.
Identities = 27/230 (11%), Positives = 58/230 (25%), Gaps = 6/230 (2%)
Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
+ + + L+ ++A + + P A L +
Sbjct: 883 ETAVALPGGDTNATAQFWLGESLLRSGQLARARTAYQRALELQPIYPEALLGLAQTQHAL 942
Query: 105 YSAGKYQQAASLGEEYITQYPESK-NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
A Q + Y E+ + G ++ +
Sbjct: 943 GQADAALQTVEQALHQRSNYAEAHLFRGKLLQEAGRFAEARAAYDAAIGTNDRIAESFYR 1002
Query: 164 RIVERYTNSPYVKGARFYVTVG--RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
R + ++ Y + R + +GR Y +G A + +
Sbjct: 1003 RALLAIRDNDYDQAIRDLNRTVTLQPNFPEAYYWLGRAYYTQGRIENAQQAIERAITLNP 1062
Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
D EA+ A + AR+ + R P W + ++
Sbjct: 1063 DYS---EAIFYSGLIAEDRANVAAARDAYQTLISREPTSEWGQRARAQLE 1109
>gi|148658023|ref|YP_001278228.1| hypothetical protein RoseRS_3925 [Roseiflexus sp. RS-1]
gi|148570133|gb|ABQ92278.1| Tetratricopeptide TPR_2 repeat protein [Roseiflexus sp. RS-1]
Length = 1180
Score = 42.1 bits (96), Expect = 0.090, Method: Composition-based stats.
Identities = 28/221 (12%), Positives = 58/221 (26%), Gaps = 5/221 (2%)
Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY-Q 111
+ + + L+ + A +++ A L + + +
Sbjct: 956 EPQSPDALLWLGEARLRTADIDGAIAAYSEALHLRDNFPEAYFGLAQAEYGAGRIEDALR 1015
Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR--IVERY 169
A E + + +Y G S + +L + R ++ R
Sbjct: 1016 NATRALELRPRYAEAALLLGKIYERQGYSMRALEAYKRAIDINPRLAEPHYRRALLLIRA 1075
Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
+ T A +GR Y + AA+ RF+ + EA
Sbjct: 1076 DRLNEAREELEVATRLDPNFAEAHYWLGRVYFAQRNIQAALNRFREAVNRQGG--AYPEA 1133
Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
A L ++ A + + WA +
Sbjct: 1134 RYYQGLAEEQLGDLNAAIRSFETVANQSDDTPWAGEARAAL 1174
>gi|21673472|ref|NP_661537.1| hypothetical protein CT0640 [Chlorobium tepidum TLS]
gi|21646577|gb|AAM71879.1| conserved hypothetical protein [Chlorobium tepidum TLS]
Length = 262
Score = 42.1 bits (96), Expect = 0.091, Method: Composition-based stats.
Identities = 15/90 (16%), Positives = 32/90 (35%)
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
++A + + Y Y AI +Q V+A Y+ + A+ + ++
Sbjct: 168 FMTGNPKSPKVADAQFFLAETYYNEKWYEKAILEYQTVIARYTKSPKRPAALYKQGLSFA 227
Query: 239 ALALMDEAREVVSLIQERYPQGYWARYVET 268
+ A+ + YPQ A+ +
Sbjct: 228 KIGDEANAKARYKDVLNLYPQSPEAKLAQK 257
>gi|327399104|ref|YP_004339973.1| hypothetical protein Hipma_0945 [Hippea maritima DSM 10411]
gi|327181733|gb|AEA33914.1| hypothetical protein Hipma_0945 [Hippea maritima DSM 10411]
Length = 295
Score = 42.1 bits (96), Expect = 0.091, Method: Composition-based stats.
Identities = 19/244 (7%), Positives = 57/244 (23%), Gaps = 9/244 (3%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
F F++ L + + ++ + R + + + +
Sbjct: 1 MFRFVFIFTVLAFLLTSCGFDDNLIIKRLNLLEGRVD---FNSKRIDENSKKIDEIAVKL 57
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
+ + + Q+ +
Sbjct: 58 QKIKERLAKERESNILAKIPPASVVDNLTNQEESKGTHVSHKSKNIYPKYKVAQNQKEKD 117
Query: 141 YAQMIRDVPYDQRATKL-----MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
+ + K + S + + +
Sbjct: 118 QMDNSSVSLNNFKINKEKEKGSAIGNKSNHMPIVPAKD-EIDNASKKLHLPPTNYKQVYK 176
Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
Y K+ ++ A F + +Y + + + A+ L Y+ +A +++ I E
Sbjct: 177 KALLYYKKKDFKQAELLFCKFINSYKNTDLYDNALYWLAYTYIHQNETGKAIKLLKEIIE 236
Query: 256 RYPQ 259
++P
Sbjct: 237 QFPN 240
>gi|237738478|ref|ZP_04568959.1| tetratricopeptide repeat family protein [Fusobacterium mortiferum
ATCC 9817]
gi|229420358|gb|EEO35405.1| tetratricopeptide repeat family protein [Fusobacterium mortiferum
ATCC 9817]
Length = 942
Score = 42.1 bits (96), Expect = 0.092, Method: Composition-based stats.
Identities = 30/216 (13%), Positives = 61/216 (28%), Gaps = 24/216 (11%)
Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
VY + + + + A YF +D + + +
Sbjct: 505 DSSPNSVYLRGIASMGMGKYQDASNYFIIVEQDTTTTPELMEKIKFNKLRNAFL------ 558
Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
+ Y + Y + + +L + R N
Sbjct: 559 ------------------WEKYEDAIKYGEEYISQYPNGENRAEVLDKTALSYFRMDNFE 600
Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
K + N +I Y +G+Y A+ ++Q V Y D+++ E A
Sbjct: 601 KSKEYYTQLQSIPNYNEYATFQIADSYYAQGKYDEALGKYQEVYTKYPDSKYGESANYWY 660
Query: 234 VEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
+ + + L DE + ++YP + L
Sbjct: 661 LNSLINLKKYDEFEKAKEEFIKKYPNSEMKENIYIL 696
Score = 36.7 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 22/225 (9%), Positives = 60/225 (26%), Gaps = 3/225 (1%)
Query: 45 DVYLDSVTDVRYQREVY-EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
+ +D +Y++ +Y L+ K+ F ++ + + + + +
Sbjct: 432 EYKNKFPSDTKYRKNIYLSVGELYYKKGMFDESANTYKEYLATNKDFDILDNLVTILLAQ 491
Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
Q + + Y + S +I + + +
Sbjct: 492 QKYSEMMTYLDGADSSPNSVYLRGIASMGMGKYQDASNYFIIVEQDTTTTPELMEKIKFN 551
Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG--RYYLKRGEYVAAIPRFQLVLANYS 221
++ + Y ++ + + L + S
Sbjct: 552 KLRNAFLWEKYEDAIKYGEEYISQYPNGENRAEVLDKTALSYFRMDNFEKSKEYYTQLQS 611
Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
+ E A ++ ++Y A DEA + +YP +
Sbjct: 612 IPNYNEYATFQIADSYYAQGKYDEALGKYQEVYTKYPDSKYGESA 656
>gi|254294752|ref|YP_003060775.1| tol-pal system protein YbgF [Hirschia baltica ATCC 49814]
gi|254043283|gb|ACT60078.1| tol-pal system protein YbgF [Hirschia baltica ATCC 49814]
Length = 284
Score = 42.1 bits (96), Expect = 0.093, Method: Composition-based stats.
Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 2/85 (2%)
Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
+ +K + L +G+Y AA F +++ + D A EA L E+ + EA
Sbjct: 155 PEDPSKLFRQAKNLLLKGDYPAAETAFAHLVSTHPDVPEAAEAQYWLGESLLIQEAFPEA 214
Query: 247 REVVSLIQERYPQGYWARYVETLVK 271
E + YP + ++LVK
Sbjct: 215 AEAYVALIRNYPDAP--KAPDSLVK 237
Score = 38.6 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 14/74 (18%), Positives = 32/74 (43%)
Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
+ A + +G L + + A + ++ NY DA A +++ +L + + +A
Sbjct: 192 PEAAEAQYWLGESLLIQEAFPEAAEAYVALIRNYPDAPKAPDSLVKLARSLRMMGDTTQA 251
Query: 247 REVVSLIQERYPQG 260
++ + YPQ
Sbjct: 252 CGALTELSNLYPQT 265
Score = 36.3 bits (81), Expect = 4.4, Method: Composition-based stats.
Identities = 12/87 (13%), Positives = 25/87 (28%)
Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
D +++ +A L + ++ A F P A ++
Sbjct: 147 KPADIEDLPEDPSKLFRQAKNLLLKGDYPAAETAFAHLVSTHPDVPEAAEAQYWLGESLL 206
Query: 106 SAGKYQQAASLGEEYITQYPESKNVDY 132
+ +AA I YP++
Sbjct: 207 IQEAFPEAAEAYVALIRNYPDAPKAPD 233
>gi|238758833|ref|ZP_04620006.1| Type IV pilus bioproteinsis/stability protein PilW [Yersinia
aldovae ATCC 35236]
gi|238702941|gb|EEP95485.1| Type IV pilus bioproteinsis/stability protein PilW [Yersinia
aldovae ATCC 35236]
Length = 244
Score = 42.1 bits (96), Expect = 0.093, Method: Composition-based stats.
Identities = 27/242 (11%), Positives = 63/242 (26%), Gaps = 17/242 (7%)
Query: 30 IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89
+ L G SS + R + + +L + + + A + + P
Sbjct: 6 LIATVLAGCSGSSSEKANQPAAGQTRL-----QLGLEYLAQGDLNAARQNLEKAVAANPQ 60
Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
A+ + Y + +A+ N + +
Sbjct: 61 DYRAQLGM-----AFYEQRIGENSAAEQRYQQAMKLAPGNGTVLNNYGAFLCSLGQYVPA 115
Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN------QLAAKEVEIGRYYLKR 203
Q + +L ++ + N+ Y R + + E +R
Sbjct: 116 QQQFSAAALLPDYGQVADSLENAGYCFLRANQNEQARVLLSRALKYDPDKDEPLLAEAQR 175
Query: 204 GEYVAAIPRFQLVLANYSDA-EHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
+ QL+L Y + E++ + D + + +PQ
Sbjct: 176 HFGEGNRAQAQLLLDVYQHTLPASAESLWLQIRFAALAGRQDSVQRYGKQLARSFPQSKQ 235
Query: 263 AR 264
+
Sbjct: 236 YQ 237
>gi|242279478|ref|YP_002991607.1| tol-pal system protein YbgF [Desulfovibrio salexigens DSM 2638]
gi|242122372|gb|ACS80068.1| tol-pal system protein YbgF [Desulfovibrio salexigens DSM 2638]
Length = 307
Score = 42.1 bits (96), Expect = 0.094, Method: Composition-based stats.
Identities = 17/119 (14%), Positives = 41/119 (34%), Gaps = 5/119 (4%)
Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK-----EVEIGRYYLKRGEYVAAIPR 212
+ + + Y R + K G Y + +Y A +
Sbjct: 186 AQALYDKGLALFKERKYKDSIRDMAEFIKTFPKHKLVPNAIFWEGECYYQLKDYANAALK 245
Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+Q V+A +S + A+ + + L R ++ + ++ P A+ ++++K
Sbjct: 246 YQGVIAKHSKSNKYRPALLKQGLCLIKLGKTKSGRYILEDLIKKAPDSAEAKRAQSIIK 304
Score = 36.3 bits (81), Expect = 4.2, Method: Composition-based stats.
Identities = 12/84 (14%), Positives = 29/84 (34%)
Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106
+ + +Y+K + KE+ + + + + FP + ++ Y
Sbjct: 176 EVKKTEPADPAQALYDKGLALFKERKYKDSIRDMAEFIKTFPKHKLVPNAIFWEGECYYQ 235
Query: 107 AGKYQQAASLGEEYITQYPESKNV 130
Y AA + I ++ +S
Sbjct: 236 LKDYANAALKYQGVIAKHSKSNKY 259
>gi|182412289|ref|YP_001817355.1| hypothetical protein Oter_0465 [Opitutus terrae PB90-1]
gi|177839503|gb|ACB73755.1| hypothetical protein Oter_0465 [Opitutus terrae PB90-1]
Length = 446
Score = 42.1 bits (96), Expect = 0.094, Method: Composition-based stats.
Identities = 26/195 (13%), Positives = 70/195 (35%), Gaps = 13/195 (6%)
Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
+E A + ++++A +++++ ++ SA+ AG + AA+
Sbjct: 194 AQFEVAETHFQNGDYAEANKFYSRLRMLDLAPEDRARAQFKSAYSLQLAGDNEGAANGLR 253
Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
+I Q+P+ +NV Y ++ + L ++ + +
Sbjct: 254 SFIEQWPDDENVPQARY--------LLASSLRTLNRPQEALTATLDLLRAERSRS-SADS 304
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
+ + R ++ + + G+ + A+ + + A D ++ + Y
Sbjct: 305 KRWAYWQRRTG----NQLANGFFQNGDILNALAIYHGLAALSDDPVWRIPVTYQIAQCYE 360
Query: 239 ALALMDEAREVVSLI 253
L +D A + +I
Sbjct: 361 RLGDLDRATKTYRVI 375
Score = 37.5 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 26/200 (13%), Positives = 52/200 (26%), Gaps = 12/200 (6%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
Q + A + K+ +KA + + +DFP +LL G
Sbjct: 101 KAPLETTQAALLGLAHMHRKQGALTKAAAIYERFLKDFPSDDRVPDALLELGRTLRDMGA 160
Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
+ A S I + + + ++ +
Sbjct: 161 PRLAISRFYNVINSTLKLPAN----------HGFEHYQLLAKTAQFEVAETHFQNGDYAE 210
Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
N Y + + A + + G+ A + + + D E+ +A
Sbjct: 211 ANKFYSRLRMLDLAP--EDRARAQFKSAYSLQLAGDNEGAANGLRSFIEQWPDDENVPQA 268
Query: 230 MARLVEAYVALALMDEAREV 249
L + L EA
Sbjct: 269 RYLLASSLRTLNRPQEALTA 288
>gi|158522219|ref|YP_001530089.1| Tol-Pal system YbgF [Desulfococcus oleovorans Hxd3]
gi|158511045|gb|ABW68012.1| Tol-Pal system YbgF [Desulfococcus oleovorans Hxd3]
Length = 275
Score = 42.1 bits (96), Expect = 0.094, Method: Composition-based stats.
Identities = 35/284 (12%), Positives = 79/284 (27%), Gaps = 51/284 (17%)
Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKE------------- 70
+ +FF + V L G + + V + ++ V ++ + +LK
Sbjct: 3 IILFFILPVFVLGGCIATQNSTLVDSRVYQLEQEQFVVKRDIDYLKNSVESKEQALRADF 62
Query: 71 ------------------QNFSKAYEYFNQCSRDFPFAGVARKSLLMSA------FVQYS 106
A + A R+ + + V
Sbjct: 63 AVLKAELNALREEVQSLRGELEAAVHLLEKQKDAATDAEKERQEQMTALGRSLIERVAAM 122
Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
A + + + + + Y+Q + ++
Sbjct: 123 EHYLGMEAPAPGAAADEAAADRAESAAEGNLAVERLYGMARQHYEQGNYDAARKGFEELI 182
Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
R+ S ARF++ + E AI +Q + +Y
Sbjct: 183 ARFPKSDLADNARFWIGESYFREKWYE--------------KAILEYQKAIDDYPRGNKV 228
Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
A+ + A+ + EAR V++ + +++P A+ E +
Sbjct: 229 PAALLKQGIAFSYIGKTTEARVVLNKLVKQFPGSSDAKIGEQKL 272
>gi|113868783|ref|YP_727272.1| hypothetical protein H16_A2827 [Ralstonia eutropha H16]
gi|113527559|emb|CAJ93904.1| hypothetical membrane associated protein [Ralstonia eutropha H16]
Length = 252
Score = 42.1 bits (96), Expect = 0.095, Method: Composition-based stats.
Identities = 18/124 (14%), Positives = 39/124 (31%), Gaps = 2/124 (1%)
Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
P ++ L+ + S + + Y LA +G + +Y
Sbjct: 128 QPGEKPEYDAALKQFQAGDFKSAGSSFSAFVKKYPQSPYVPLAQY--WLGNSLYAQRDYK 185
Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
+ Q ++ N +AM + + AR+ + + +YP A+
Sbjct: 186 GSTSVLQTMINNNPTHPKVPDAMIAVANNQLESGQKAAARKTLEQVVAKYPGTEGAQAAS 245
Query: 268 TLVK 271
+K
Sbjct: 246 NRLK 249
Score = 37.1 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 26/74 (35%)
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
Y+ A+ + +F A F+ + +P + + Y+ Y+ + S+ +
Sbjct: 135 YDAALKQFQAGDFKSAGSSFSAFVKKYPQSPYVPLAQYWLGNSLYAQRDYKGSTSVLQTM 194
Query: 121 ITQYPESKNVDYVY 134
I P V
Sbjct: 195 INNNPTHPKVPDAM 208
>gi|260592657|ref|ZP_05858115.1| putative TPR domain protein [Prevotella veroralis F0319]
gi|260535427|gb|EEX18044.1| putative TPR domain protein [Prevotella veroralis F0319]
Length = 1133
Score = 41.7 bits (95), Expect = 0.098, Method: Composition-based stats.
Identities = 19/178 (10%), Positives = 46/178 (25%), Gaps = 1/178 (0%)
Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
+ + A + ++ + + + + + + N Y
Sbjct: 496 WYFYNPTAVQQGKVTFQQLWGKRENIDNWQRMNQTVVRNIGNTNNPYEMTDAQRDSIYKA 555
Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
T+ L+ Y + A + + +
Sbjct: 556 EAKRDSLEQTRDSLKN-DPHKREYYLAQIPFTAEQLAASNKILEDGLHHSGVIFKDRLNN 614
Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
A + V NY D E ++ L Y+ + A ++ + +YP+ W
Sbjct: 615 LRLAERALRRVSDNYPDYEAMDDVYYHLYLLYMRKNEPEIAETYLTKLSRQYPKSKWT 672
Score = 36.7 bits (82), Expect = 3.9, Method: Composition-based stats.
Identities = 34/225 (15%), Positives = 66/225 (29%), Gaps = 5/225 (2%)
Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
D+ T++ V K L + NF++A E + +
Sbjct: 59 GSIEKEKGNKDNFTELIPLYTVGNKNSRDLGKSNFNRAIEKAEKAIAKHSIKKRPEWTKN 118
Query: 99 MSAFVQYSAGKYQQAASLGEEYITQ-YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
+ ++ + S+ + ++A M R
Sbjct: 119 RKKTSKDIEWLSRREYNPFLWKAWMLMGRSQFHQGAFEEAAATFAYMSRMYKGQPAIYGK 178
Query: 158 MLQYMSRIVERYTNSPYVKG-ARFYVTVGRNQLAAKEVEIGR--YYLKRGEYVAAIPRFQ 214
++++ + R + A KE + YYL GE A+P Q
Sbjct: 179 ARAWLAKCYIEQGWLYDAEDVIRNMQRDSMDWRAVKEWDYTYADYYLHTGELAKAVPYLQ 238
Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV-SLIQERYP 258
V+ + + + L + Y AL +A E +I+ P
Sbjct: 239 KVIKHEMRQKQKARELYLLGQVYAALGKRQDAYEAFQRVIRTNPP 283
>gi|189462715|ref|ZP_03011500.1| hypothetical protein BACCOP_03412 [Bacteroides coprocola DSM 17136]
gi|189430584|gb|EDU99568.1| hypothetical protein BACCOP_03412 [Bacteroides coprocola DSM 17136]
Length = 278
Score = 41.7 bits (95), Expect = 0.098, Method: Composition-based stats.
Identities = 44/274 (16%), Positives = 83/274 (30%), Gaps = 30/274 (10%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
+ ++ L + D+ YE A + + SKA
Sbjct: 1 MKKYIVMAILSAGVLSSCGEYNKVLKSTDNEYK-------YEAAKSYFAKGQNSKAATLL 53
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
+ A +S M A Y+ G Y A+ Y T YP + + G +
Sbjct: 54 EDLALIMKGTSNAEESAYMLAMTYYNQGDYITASHYFNTYYTTYPRGTYTELARFYSGKA 113
Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK-------- 192
+ DQ +T ++ + +E + S + A+ + +++L K
Sbjct: 114 LYLDTPEPRLDQSSTYKAIEELQMFIEYFPESDRKELAQNMIFELQDKLVEKEFLSALLY 173
Query: 193 -----EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD--- 244
Y Y AA+ Q +L Y + E+ ++ A +A
Sbjct: 174 YDLGSYTGNTVYSSTGNNYQAAVVTAQNILREYPYTKRREDLSILILRAKYDMAKESVPE 233
Query: 245 -------EAREVVSLIQERYPQGYWARYVETLVK 271
E + +P+ + VE + K
Sbjct: 234 KKEDRMRETIDEYYAFINEFPESKYKSEVERIFK 267
>gi|108758688|ref|YP_631542.1| transglycosylase SLT domain-containing protein [Myxococcus xanthus
DK 1622]
gi|108462568|gb|ABF87753.1| transglycosylase SLT domain protein [Myxococcus xanthus DK 1622]
Length = 801
Score = 41.7 bits (95), Expect = 0.098, Method: Composition-based stats.
Identities = 9/62 (14%), Positives = 22/62 (35%)
Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
+ ++ + + D A++ + + Y+ EA + + YPQG +
Sbjct: 380 DQARGTETYERLAREFPDHSFADDGLFYAADLYLKTGRPKEAMARLDTLARLYPQGDFLG 439
Query: 265 YV 266
Sbjct: 440 EA 441
>gi|21672858|ref|NP_660923.1| hypothetical protein CT0017 [Chlorobium tepidum TLS]
gi|21645907|gb|AAM71265.1| hypothetical protein CT0017 [Chlorobium tepidum TLS]
Length = 382
Score = 41.7 bits (95), Expect = 0.098, Method: Composition-based stats.
Identities = 31/217 (14%), Positives = 59/217 (27%), Gaps = 10/217 (4%)
Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
Y +A + ++ ++ A + L A Y +Y AA
Sbjct: 114 PVELRYREATEKIAKRKYNDAIVILESLMFSTRATALEDDVLKALADSYYKKKEYILAAD 173
Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
+ Q P+S +++ SY ++ DQ T + +++Y +
Sbjct: 174 TYRRLLQQTPDSPYARDAQFMLAKSYEKLSPFHELDQEYTVKAINEFETYLDQYPS---- 229
Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD---AEHAEEAMAR 232
+ +V + A A YS +E E
Sbjct: 230 DDSAQAANDLELYKNLMKVNPDNASYREKYEAAKEELASGSPARYSQKAISELRERLAHN 289
Query: 233 ---LVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
+ Y L A ++ +YP W
Sbjct: 290 RFSIARQYFKLKKYRAAEIFYDVVINQYPDTKWLESA 326
>gi|237756685|ref|ZP_04585190.1| tfp pilus assembly protein PilF [Sulfurihydrogenibium
yellowstonense SS-5]
gi|237691150|gb|EEP60253.1| tfp pilus assembly protein PilF [Sulfurihydrogenibium
yellowstonense SS-5]
Length = 293
Score = 41.7 bits (95), Expect = 0.099, Method: Composition-based stats.
Identities = 29/234 (12%), Positives = 56/234 (23%), Gaps = 12/234 (5%)
Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85
F + S + L +YE V +L N + A +Y + +
Sbjct: 5 FFALTLAILISSCANPQSYETDLRVGDGKY----LYEMGVSYLNSGNNAMAIKYLEEALK 60
Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV----DYVYYLVGMSY 141
+ V L F A ++Y N
Sbjct: 61 SYDKPEVYNALALAYQFAGEFAKAEDIFRLGIDKYPDYPELLTNYGILLANQKKFNEAIK 120
Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
+ + + + + + + +G YYL
Sbjct: 121 YFEKAINNPTYSGKEKAYYNLGMVYLQLGKEDLFLYNLEKALMFNSNFVNAYIALGDYYL 180
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHA----EEAMARLVEAYVALALMDEAREVVS 251
+ V + + YS A + RL + Y L + A+ +
Sbjct: 181 DKYNVVHSKEMLKKAREYYSKALNYVVNDPLIYFRLGKVYHELGDDELAKYYLE 234
>gi|288803010|ref|ZP_06408446.1| putative TPR domain protein [Prevotella melaninogenica D18]
gi|288334527|gb|EFC72966.1| putative TPR domain protein [Prevotella melaninogenica D18]
Length = 1152
Score = 41.7 bits (95), Expect = 0.10, Method: Composition-based stats.
Identities = 12/71 (16%), Positives = 24/71 (33%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ + A + V NY D E ++ L Y+ A V+
Sbjct: 584 HHSGVIFKDRLDNLRLAEKALRRVSDNYPDYEQMDDVYYHLYLLYMRKNEPQVAENYVTR 643
Query: 253 IQERYPQGYWA 263
+ +++P+ W
Sbjct: 644 LIQKFPKSKWT 654
Score = 39.4 bits (89), Expect = 0.51, Method: Composition-based stats.
Identities = 31/225 (13%), Positives = 66/225 (29%), Gaps = 5/225 (2%)
Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL- 97
D+ T++ V K L + NF +A E + + +
Sbjct: 43 GSLEKEKGNKDNFTELIPLYTVGNKNSRDLGKGNFDRAIEKAEKAIAKYSIKKRPEWTKS 102
Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
++ + S+ + ++A M R
Sbjct: 103 RRKTEKDIEWLSRREYNPFLWKAWMLMGRSQFHKGAFEEAAATFAYMSRIYKGQPAIYGK 162
Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGR-NQLAAKEVEIGR--YYLKRGEYVAAIPRFQ 214
++++ + + + A KE + YYL GE+ A+P Q
Sbjct: 163 ARAWLAKCYIEQDWLYDAEDIIRNMQRDSLDWRAVKEWDYTYADYYLHSGEFEKAVPYLQ 222
Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV-SLIQERYP 258
V+ + + + L + +L +EA + +I+ P
Sbjct: 223 KVIKHEMRKKQKARELYLLGQVLASLGRNEEAYKAFQRVIRTNPP 267
>gi|50962841|ref|NP_796342.2| transmembrane and TPR repeat-containing protein 2 [Mus musculus]
gi|81909357|sp|Q56A06|TMTC2_MOUSE RecName: Full=Transmembrane and TPR repeat-containing protein 2
gi|62132956|gb|AAH92226.1| Transmembrane and tetratricopeptide repeat containing 2 [Mus
musculus]
gi|187953887|gb|AAI38363.1| Transmembrane and tetratricopeptide repeat containing 2 [Mus
musculus]
gi|187953889|gb|AAI38364.1| Transmembrane and tetratricopeptide repeat containing 2 [Mus
musculus]
Length = 836
Score = 41.7 bits (95), Expect = 0.10, Method: Composition-based stats.
Identities = 18/226 (7%), Positives = 51/226 (22%), Gaps = 10/226 (4%)
Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
++ +Y L+ ++ + +A + + + P +
Sbjct: 587 CSEIPDENLKDPHAHKSSVTSCLYNLGKLYHEQGRYEEALSVYREAIQKMPRHFAPQSLY 646
Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK- 156
M K +A E + + Y + + + +A +
Sbjct: 647 NMMGEAYMRLSKLPEAEHWYMESLRSKTDHIPAHLTYGKLLALTGRKSEAEKFFLKAIEL 706
Query: 157 -----LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
+ + + + N + AA
Sbjct: 707 DPTKGNCYMHYGQFLLEESRLTEAAEMAKKAAELDNTEFDVVFNAAHMLRQASLNEAAEK 766
Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR-EVVSLIQER 256
+ L + A+ L + +A + +Q +
Sbjct: 767 YYDLAARLRPNYPA---ALMNLGAILHLNGRLQKAEANYLRALQLK 809
>gi|262193701|ref|YP_003264910.1| lytic transglycosylase catalytic [Haliangium ochraceum DSM 14365]
gi|262077048|gb|ACY13017.1| Lytic transglycosylase catalytic [Haliangium ochraceum DSM 14365]
Length = 730
Score = 41.7 bits (95), Expect = 0.10, Method: Composition-based stats.
Identities = 33/206 (16%), Positives = 58/206 (28%), Gaps = 5/206 (2%)
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
Y A + ++ A + R+ P +A ++ A A SL
Sbjct: 151 YRIAAALVAQKRKQPAMRALREFLREHPEHPMAEQAT-----ADLRALGGAAAVSLSPRD 205
Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
++ + + A + +V + R + Q M+ R +
Sbjct: 206 RLARAQTLTAERRLHQSYAELAAIGDEVDAELRRERDYWQAMTLFKMRRRYEDAGRTLLS 265
Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
+ A R + AI +Q V A Y A EA L
Sbjct: 266 LYKQLGGRAAMAMFHGARALSRADRDREAIDWYQRVAAEYPRTIWAAEAQFLAGWLAFNL 325
Query: 241 ALMDEAREVVSLIQERYPQGYWARYV 266
D A ++ +RY W +
Sbjct: 326 GDYDAAIPLLERTLDRYGDTKWQKPA 351
>gi|161525758|ref|YP_001580770.1| tol-pal system protein YbgF [Burkholderia multivorans ATCC 17616]
gi|189349520|ref|YP_001945148.1| hypothetical protein BMULJ_00649 [Burkholderia multivorans ATCC
17616]
gi|221201004|ref|ZP_03574044.1| tol-pal system protein YbgF [Burkholderia multivorans CGD2M]
gi|221206544|ref|ZP_03579557.1| tol-pal system protein YbgF [Burkholderia multivorans CGD2]
gi|221214398|ref|ZP_03587369.1| tol-pal system protein YbgF [Burkholderia multivorans CGD1]
gi|160343187|gb|ABX16273.1| tol-pal system protein YbgF [Burkholderia multivorans ATCC 17616]
gi|189333542|dbj|BAG42612.1| conserved hypothetical protein [Burkholderia multivorans ATCC
17616]
gi|221165655|gb|EED98130.1| tol-pal system protein YbgF [Burkholderia multivorans CGD1]
gi|221173853|gb|EEE06287.1| tol-pal system protein YbgF [Burkholderia multivorans CGD2]
gi|221178854|gb|EEE11261.1| tol-pal system protein YbgF [Burkholderia multivorans CGD2M]
Length = 249
Score = 41.7 bits (95), Expect = 0.10, Method: Composition-based stats.
Identities = 19/111 (17%), Positives = 33/111 (29%)
Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
+ +Y + R + V + + + G + AA F+
Sbjct: 94 RQQKEYYEDLDTRLKKFEPQQKTIDGVEGTVQPGETDALNAAQQQFRNGNFKAAAASFRS 153
Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
+A Y + + A L A AL + I +YPQ A
Sbjct: 154 FIAKYPQSPYQPTAQYWLGNAQYALRDYRGSTATWQAIVSKYPQHPRAADA 204
Score = 38.2 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 15/125 (12%), Positives = 40/125 (32%), Gaps = 14/125 (11%)
Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
+ K + +Y SPY A++++ G +Y
Sbjct: 136 QQQFRNGNFKAAAASFRSFIAKYPQSPYQPTAQYWL--------------GNAQYALRDY 181
Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
+ +Q +++ Y A +A+ + + A++ + +Y A+
Sbjct: 182 RGSTATWQAIVSKYPQHPRAADALVAIGTNQLEQGQKAAAKKTFEQVVSQYAGSNAAQTA 241
Query: 267 ETLVK 271
+ ++
Sbjct: 242 QGKLE 246
>gi|116329260|ref|YP_798980.1| cAMP-binding protein, regulatory protein [Leptospira borgpetersenii
serovar Hardjo-bovis L550]
gi|116330134|ref|YP_799852.1| cAMP-binding protein, regulatory protein [Leptospira borgpetersenii
serovar Hardjo-bovis JB197]
gi|116122004|gb|ABJ80047.1| cAMP-binding protein, regulatory protein [Leptospira borgpetersenii
serovar Hardjo-bovis L550]
gi|116123823|gb|ABJ75094.1| cAMP-binding protein, regulatory protein [Leptospira borgpetersenii
serovar Hardjo-bovis JB197]
Length = 352
Score = 41.7 bits (95), Expect = 0.10, Method: Composition-based stats.
Identities = 30/222 (13%), Positives = 62/222 (27%), Gaps = 4/222 (1%)
Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
L E+ A +F K NF A F + + +P ++ +
Sbjct: 114 KKLKEILGQSDTRNPAFELMNVAEVFYKNNNFPHAIYAFEKYLQHYPGTTYTGRATELLE 173
Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
+ S+ L E T + + + + V +
Sbjct: 174 LAKRSSPYPLNMPPLVFEGSTSKITPETLQNIMKPAVEKSSLTNTGVDNSITSLYNRAHT 233
Query: 162 MSRIVERYTNSPYVKG----ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
+ + + K F + + ++G LK+ + +A F +
Sbjct: 234 LVNVEKHGEAMAIYKDLLNRTDFKFDSEKKLVENSLFQLGVCLLKQNDLDSANSSFSTYI 293
Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
Y E +E++ L E AR + + P+
Sbjct: 294 KKYPSGESIKESLFHLAEISELQGNRQRARMLYGKVALLPPE 335
>gi|73540501|ref|YP_295021.1| TPR repeat-containing protein [Ralstonia eutropha JMP134]
gi|72117914|gb|AAZ60177.1| TPR repeat [Ralstonia eutropha JMP134]
Length = 252
Score = 41.7 bits (95), Expect = 0.10, Method: Composition-based stats.
Identities = 18/124 (14%), Positives = 40/124 (32%), Gaps = 2/124 (1%)
Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
P ++ L+ + + + + + Y LA +G + +Y
Sbjct: 128 QPNEKPEYDAALKQFQAGDFKSSGNSFAAFVKKYPQSPYLPLAQY--WLGNALYAQRDYK 185
Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
+ Q +L A +AM + + AR+ + + +YP A+
Sbjct: 186 GSTTVLQNMLQANPTHPKAPDAMIAIANNQLESGQKAAARKTLEQVVAKYPGTEGAQAAS 245
Query: 268 TLVK 271
+K
Sbjct: 246 NRLK 249
>gi|42527006|ref|NP_972104.1| hypothetical protein TDE1498 [Treponema denticola ATCC 35405]
gi|41817430|gb|AAS12015.1| conserved hypothetical protein [Treponema denticola ATCC 35405]
Length = 501
Score = 41.7 bits (95), Expect = 0.10, Method: Composition-based stats.
Identities = 15/99 (15%), Positives = 42/99 (42%), Gaps = 5/99 (5%)
Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
+ + + + A++ +++ R Y+ G +A+ + NY + + +EA+ +
Sbjct: 395 EKSESKTSGQDFKSASELLDMIRGYISEGNAASALNSAEDFFKNY--SVNLDEALFLRGQ 452
Query: 236 AYVALA---LMDEAREVVSLIQERYPQGYWARYVETLVK 271
AY + +A E + + YP+ + + ++
Sbjct: 453 AYELNGPNKNIKKALEAYQTLTKAYPESKFWDKADARIR 491
>gi|83312307|ref|YP_422571.1| hypothetical protein amb3208 [Magnetospirillum magneticum AMB-1]
gi|82947148|dbj|BAE52012.1| Uncharacterized protein conserved in bacteria [Magnetospirillum
magneticum AMB-1]
Length = 355
Score = 41.7 bits (95), Expect = 0.10, Method: Composition-based stats.
Identities = 15/82 (18%), Positives = 31/82 (37%), Gaps = 2/82 (2%)
Query: 180 FYVTVGRNQLAAKEVEIG--RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
F T +QLA + +R ++ + F Y A + + +L ++
Sbjct: 254 FLKTYPNHQLAGNAQYWLGDIAFSQRKDFATSAKLFGEAYKKYPKHTKAPDMLYKLGASF 313
Query: 238 VALALMDEAREVVSLIQERYPQ 259
L + D+A +L+ +P
Sbjct: 314 GHLDMKDQACRTYALLFAEHPD 335
>gi|17545456|ref|NP_518858.1| hypothetical protein RSc0737 [Ralstonia solanacearum GMI1000]
gi|17427748|emb|CAD14267.1| probable transmembrane protein [Ralstonia solanacearum GMI1000]
Length = 274
Score = 41.7 bits (95), Expect = 0.10, Method: Composition-based stats.
Identities = 16/126 (12%), Positives = 39/126 (30%), Gaps = 2/126 (1%)
Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
P ++ L+ + + + + Y LA + +G + +
Sbjct: 148 MVQPGEKTEYDAALKTFQSGDFKGAGNQFSAFVKKYPQSPYLPLA--QFWLGNALYAQRD 205
Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
Y + + + A EA+ ++ AR+ + + YP A+
Sbjct: 206 YKGSTYVLENMARANPQHPKAPEALLQVATNQGESGQKAAARKTLETVIAEYPGTEQAKT 265
Query: 266 VETLVK 271
+ +K
Sbjct: 266 ATSRLK 271
>gi|315185944|gb|EFU19708.1| hypothetical protein SpithDRAFT_1587 [Spirochaeta thermophila DSM
6578]
Length = 263
Score = 41.7 bits (95), Expect = 0.10, Method: Composition-based stats.
Identities = 24/124 (19%), Positives = 40/124 (32%), Gaps = 3/124 (2%)
Query: 151 DQRATKLMLQYMSRI---VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
D L + +I + Y + A + GR G+Y
Sbjct: 58 DSPVYLEALFWYGKICLTLGEYDEARESLEAFLLKGGSHPLYEEALYQKGRLLYLEGDYQ 117
Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
+ I F LA+Y ++ A+ E+ +L EAR + I E Y A
Sbjct: 118 SCISHFNAFLASYPTSQFVPNALYWSAESLFSLGHFTEARPLYEHIVENYRSSPKAEAAR 177
Query: 268 TLVK 271
++
Sbjct: 178 YRME 181
>gi|306841412|ref|ZP_07474114.1| tol-pal system protein YbgF [Brucella sp. BO2]
gi|306288518|gb|EFM59870.1| tol-pal system protein YbgF [Brucella sp. BO2]
Length = 484
Score = 41.7 bits (95), Expect = 0.10, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 27/78 (34%), Gaps = 2/78 (2%)
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+ YL G+Y AA F+ + Y EA L E+ EA +
Sbjct: 364 YQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYPEAATLFIDT 423
Query: 254 QERYPQGYWARYVETLVK 271
Q YP R E + K
Sbjct: 424 QRDYPDSK--RAPENMFK 439
Score = 40.5 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 42/126 (33%), Gaps = 7/126 (5%)
Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
+ QY+ + + + + + Y A +G +G
Sbjct: 355 PTDDNPNSLYQAAYQYLMSGDYKAAEAGFREHVKRYPA--DPMTAEARFWLGESLYGQGR 412
Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
Y A F +Y D++ A E M +L A + D A + I +RYP +
Sbjct: 413 YPEAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATFAQIPQRYP-----KA 467
Query: 266 VETLVK 271
++K
Sbjct: 468 APAILK 473
Score = 39.0 bits (88), Expect = 0.69, Method: Composition-based stats.
Identities = 21/118 (17%), Positives = 44/118 (37%), Gaps = 8/118 (6%)
Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
+Y+ A +L ++ A F + + +P + ++ Y G+Y +A
Sbjct: 357 DDNPNSLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYPEA 416
Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
A+L + YP+SK + +GM+ + ++I +RY
Sbjct: 417 ATLFIDTQRDYPDSKRAPENMFKLGMA--------LEKMDNHDVACATFAQIPQRYPK 466
>gi|306844685|ref|ZP_07477270.1| tol-pal system protein YbgF [Brucella sp. BO1]
gi|306274857|gb|EFM56627.1| tol-pal system protein YbgF [Brucella sp. BO1]
Length = 484
Score = 41.7 bits (95), Expect = 0.10, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 27/78 (34%), Gaps = 2/78 (2%)
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+ YL G+Y AA F+ + Y EA L E+ EA +
Sbjct: 364 YQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYPEAATLFIDT 423
Query: 254 QERYPQGYWARYVETLVK 271
Q YP R E + K
Sbjct: 424 QRDYPDSK--RAPENMFK 439
Score = 40.5 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 42/126 (33%), Gaps = 7/126 (5%)
Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
+ QY+ + + + + + Y A +G +G
Sbjct: 355 PTDDNPNSLYQAAYQYLMSGDYKAAEAGFREHVKRYPA--DPMTAEARFWLGESLYGQGR 412
Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
Y A F +Y D++ A E M +L A + D A + I +RYP +
Sbjct: 413 YPEAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATFAQIPQRYP-----KA 467
Query: 266 VETLVK 271
++K
Sbjct: 468 APAILK 473
Score = 39.0 bits (88), Expect = 0.69, Method: Composition-based stats.
Identities = 21/118 (17%), Positives = 44/118 (37%), Gaps = 8/118 (6%)
Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
+Y+ A +L ++ A F + + +P + ++ Y G+Y +A
Sbjct: 357 DDNPNSLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYPEA 416
Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
A+L + YP+SK + +GM+ + ++I +RY
Sbjct: 417 ATLFIDTQRDYPDSKRAPENMFKLGMA--------LEKMDNHDVACATFAQIPQRYPK 466
>gi|265984711|ref|ZP_06097446.1| tol-Pal system YbgF [Brucella sp. 83/13]
gi|264663303|gb|EEZ33564.1| tol-Pal system YbgF [Brucella sp. 83/13]
Length = 488
Score = 41.7 bits (95), Expect = 0.10, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 27/78 (34%), Gaps = 2/78 (2%)
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+ YL G+Y AA F+ + Y EA L E+ EA +
Sbjct: 368 YQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYPEAATLFIDT 427
Query: 254 QERYPQGYWARYVETLVK 271
Q YP R E + K
Sbjct: 428 QRDYPDSK--RAPENMFK 443
Score = 40.5 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 42/126 (33%), Gaps = 7/126 (5%)
Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
+ QY+ + + + + + Y A +G +G
Sbjct: 359 PTDDNPNSLYQAAYQYLMSGDYKAAEAGFREHVKRYPA--DPMTAEARFWLGESLYGQGR 416
Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
Y A F +Y D++ A E M +L A + D A + I +RYP +
Sbjct: 417 YPEAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATFAQIPQRYP-----KA 471
Query: 266 VETLVK 271
++K
Sbjct: 472 APAILK 477
Score = 39.0 bits (88), Expect = 0.69, Method: Composition-based stats.
Identities = 21/118 (17%), Positives = 44/118 (37%), Gaps = 8/118 (6%)
Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
+Y+ A +L ++ A F + + +P + ++ Y G+Y +A
Sbjct: 361 DDNPNSLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYPEA 420
Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
A+L + YP+SK + +GM+ + ++I +RY
Sbjct: 421 ATLFIDTQRDYPDSKRAPENMFKLGMA--------LEKMDNHDVACATFAQIPQRYPK 470
>gi|265991729|ref|ZP_06104286.1| tol-Pal system YbgF [Brucella melitensis bv. 1 str. Rev.1]
gi|263002685|gb|EEZ15088.1| tol-Pal system YbgF [Brucella melitensis bv. 1 str. Rev.1]
Length = 488
Score = 41.7 bits (95), Expect = 0.10, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 27/78 (34%), Gaps = 2/78 (2%)
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+ YL G+Y AA F+ + Y EA L E+ EA +
Sbjct: 368 YQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYPEAATLFIDT 427
Query: 254 QERYPQGYWARYVETLVK 271
Q YP R E + K
Sbjct: 428 QRDYPDSK--RAPENMFK 443
Score = 40.5 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 42/126 (33%), Gaps = 7/126 (5%)
Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
+ QY+ + + + + + Y A +G +G
Sbjct: 359 PTDDNPNSLYQAAYQYLMSGDYKAAEAGFREHVKRYPA--DPMTAEARFWLGESLYGQGR 416
Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
Y A F +Y D++ A E M +L A + D A + I +RYP +
Sbjct: 417 YPEAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATFAQIPQRYP-----KA 471
Query: 266 VETLVK 271
++K
Sbjct: 472 APAILK 477
Score = 39.0 bits (88), Expect = 0.69, Method: Composition-based stats.
Identities = 21/118 (17%), Positives = 44/118 (37%), Gaps = 8/118 (6%)
Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
+Y+ A +L ++ A F + + +P + ++ Y G+Y +A
Sbjct: 361 DDNPNSLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYPEA 420
Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
A+L + YP+SK + +GM+ + ++I +RY
Sbjct: 421 ATLFIDTQRDYPDSKRAPENMFKLGMA--------LEKMDNHDVACATFAQIPQRYPK 470
>gi|261754102|ref|ZP_05997811.1| tol-Pal system YbgF [Brucella suis bv. 3 str. 686]
gi|261743855|gb|EEY31781.1| tol-Pal system YbgF [Brucella suis bv. 3 str. 686]
Length = 488
Score = 41.7 bits (95), Expect = 0.10, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 27/78 (34%), Gaps = 2/78 (2%)
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+ YL G+Y AA F+ + Y EA L E+ EA +
Sbjct: 368 YQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYPEAATLFIDT 427
Query: 254 QERYPQGYWARYVETLVK 271
Q YP R E + K
Sbjct: 428 QRDYPDSK--RAPENMFK 443
Score = 40.5 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 42/126 (33%), Gaps = 7/126 (5%)
Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
+ QY+ + + + + + Y A +G +G
Sbjct: 359 PTDDNPNSLYQAAYQYLMSGDYKAAEAGFREHVKRYPA--DPMTAEARFWLGESLYGQGR 416
Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
Y A F +Y D++ A E M +L A + D A + I +RYP +
Sbjct: 417 YPEAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATFAQIPQRYP-----KA 471
Query: 266 VETLVK 271
++K
Sbjct: 472 APAILK 477
Score = 39.0 bits (88), Expect = 0.69, Method: Composition-based stats.
Identities = 21/118 (17%), Positives = 44/118 (37%), Gaps = 8/118 (6%)
Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
+Y+ A +L ++ A F + + +P + ++ Y G+Y +A
Sbjct: 361 DDNPNSLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYPEA 420
Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
A+L + YP+SK + +GM+ + ++I +RY
Sbjct: 421 ATLFIDTQRDYPDSKRAPENMFKLGMA--------LEKMDNHDVACATFAQIPQRYPK 470
>gi|261219283|ref|ZP_05933564.1| tol-Pal system YbgF [Brucella ceti M13/05/1]
gi|261322344|ref|ZP_05961541.1| tol-Pal system YbgF [Brucella ceti M644/93/1]
gi|260924372|gb|EEX90940.1| tol-Pal system YbgF [Brucella ceti M13/05/1]
gi|261295034|gb|EEX98530.1| tol-Pal system YbgF [Brucella ceti M644/93/1]
Length = 488
Score = 41.7 bits (95), Expect = 0.10, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 27/78 (34%), Gaps = 2/78 (2%)
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+ YL G+Y AA F+ + Y EA L E+ EA +
Sbjct: 368 YQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYPEAATLFIDT 427
Query: 254 QERYPQGYWARYVETLVK 271
Q YP R E + K
Sbjct: 428 QRDYPDSK--RAPENMFK 443
Score = 40.5 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 42/126 (33%), Gaps = 7/126 (5%)
Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
+ QY+ + + + + + Y A +G +G
Sbjct: 359 PTDDNPNSLYQAAYQYLMSGDYKAAEAGFREHVKRYPA--DPMTAEARFWLGESLYGQGR 416
Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
Y A F +Y D++ A E M +L A + D A + I +RYP +
Sbjct: 417 YPEAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATFAQIPQRYP-----KA 471
Query: 266 VETLVK 271
++K
Sbjct: 472 APAILK 477
Score = 39.0 bits (88), Expect = 0.69, Method: Composition-based stats.
Identities = 21/118 (17%), Positives = 44/118 (37%), Gaps = 8/118 (6%)
Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
+Y+ A +L ++ A F + + +P + ++ Y G+Y +A
Sbjct: 361 DDNPNSLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYPEA 420
Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
A+L + YP+SK + +GM+ + ++I +RY
Sbjct: 421 ATLFIDTQRDYPDSKRAPENMFKLGMA--------LEKMDNHDVACATFAQIPQRYPK 470
>gi|261214663|ref|ZP_05928944.1| tol-Pal system YbgF [Brucella abortus bv. 3 str. Tulya]
gi|260916270|gb|EEX83131.1| tol-Pal system YbgF [Brucella abortus bv. 3 str. Tulya]
Length = 488
Score = 41.7 bits (95), Expect = 0.10, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 27/78 (34%), Gaps = 2/78 (2%)
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+ YL G+Y AA F+ + Y EA L E+ EA +
Sbjct: 368 YQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYPEAATLFIDT 427
Query: 254 QERYPQGYWARYVETLVK 271
Q YP R E + K
Sbjct: 428 QRDYPDSK--RAPENMFK 443
Score = 40.5 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 42/126 (33%), Gaps = 7/126 (5%)
Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
+ QY+ + + + + + Y A +G +G
Sbjct: 359 PTDDNPNSLYQAAYQYLMSGDYKAAEAGFREHVKRYPA--DPMTAEARFWLGESLYGQGR 416
Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
Y A F +Y D++ A E M +L A + D A + I +RYP +
Sbjct: 417 YPEAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATFAQIPQRYP-----KA 471
Query: 266 VETLVK 271
++K
Sbjct: 472 APAILK 477
Score = 39.0 bits (88), Expect = 0.69, Method: Composition-based stats.
Identities = 21/118 (17%), Positives = 44/118 (37%), Gaps = 8/118 (6%)
Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
+Y+ A +L ++ A F + + +P + ++ Y G+Y +A
Sbjct: 361 DDNPNSLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYPEA 420
Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
A+L + YP+SK + +GM+ + ++I +RY
Sbjct: 421 ATLFIDTQRDYPDSKRAPENMFKLGMA--------LEKMDNHDVACATFAQIPQRYPK 470
>gi|260547190|ref|ZP_05822928.1| TPR repeat-containing protein [Brucella abortus NCTC 8038]
gi|260095555|gb|EEW79433.1| TPR repeat-containing protein [Brucella abortus NCTC 8038]
Length = 321
Score = 41.7 bits (95), Expect = 0.10, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 27/78 (34%), Gaps = 2/78 (2%)
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+ YL G+Y AA F+ + Y EA L E+ EA +
Sbjct: 201 YQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYPEAATLFIDT 260
Query: 254 QERYPQGYWARYVETLVK 271
Q YP R E + K
Sbjct: 261 QRDYPDSK--RAPENMFK 276
Score = 40.5 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 42/126 (33%), Gaps = 7/126 (5%)
Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
+ QY+ + + + + + Y A +G +G
Sbjct: 192 PTDDNPNSLYQAAYQYLMSGDYKAAEAGFREHVKRYPA--DPMTAEARFWLGESLYGQGR 249
Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
Y A F +Y D++ A E M +L A + D A + I +RYP +
Sbjct: 250 YPEAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATFAQIPQRYP-----KA 304
Query: 266 VETLVK 271
++K
Sbjct: 305 APAILK 310
Score = 39.0 bits (88), Expect = 0.69, Method: Composition-based stats.
Identities = 21/118 (17%), Positives = 44/118 (37%), Gaps = 8/118 (6%)
Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
+Y+ A +L ++ A F + + +P + ++ Y G+Y +A
Sbjct: 194 DDNPNSLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYPEA 253
Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
A+L + YP+SK + +GM+ + ++I +RY
Sbjct: 254 ATLFIDTQRDYPDSKRAPENMFKLGMA--------LEKMDNHDVACATFAQIPQRYPK 303
>gi|256045304|ref|ZP_05448198.1| TPR repeat-containing protein [Brucella melitensis bv. 1 str.
Rev.1]
Length = 484
Score = 41.7 bits (95), Expect = 0.10, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 27/78 (34%), Gaps = 2/78 (2%)
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+ YL G+Y AA F+ + Y EA L E+ EA +
Sbjct: 364 YQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYPEAATLFIDT 423
Query: 254 QERYPQGYWARYVETLVK 271
Q YP R E + K
Sbjct: 424 QRDYPDSK--RAPENMFK 439
Score = 40.5 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 42/126 (33%), Gaps = 7/126 (5%)
Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
+ QY+ + + + + + Y A +G +G
Sbjct: 355 PTDDNPNSLYQAAYQYLMSGDYKAAEAGFREHVKRYPA--DPMTAEARFWLGESLYGQGR 412
Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
Y A F +Y D++ A E M +L A + D A + I +RYP +
Sbjct: 413 YPEAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATFAQIPQRYP-----KA 467
Query: 266 VETLVK 271
++K
Sbjct: 468 APAILK 473
Score = 39.0 bits (88), Expect = 0.69, Method: Composition-based stats.
Identities = 21/118 (17%), Positives = 44/118 (37%), Gaps = 8/118 (6%)
Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
+Y+ A +L ++ A F + + +P + ++ Y G+Y +A
Sbjct: 357 DDNPNSLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYPEA 416
Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
A+L + YP+SK + +GM+ + ++I +RY
Sbjct: 417 ATLFIDTQRDYPDSKRAPENMFKLGMA--------LEKMDNHDVACATFAQIPQRYPK 466
>gi|254719696|ref|ZP_05181507.1| TPR repeat-containing protein [Brucella sp. 83/13]
gi|306837845|ref|ZP_07470707.1| tol-pal system protein YbgF [Brucella sp. NF 2653]
gi|306407084|gb|EFM63301.1| tol-pal system protein YbgF [Brucella sp. NF 2653]
Length = 484
Score = 41.7 bits (95), Expect = 0.10, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 27/78 (34%), Gaps = 2/78 (2%)
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+ YL G+Y AA F+ + Y EA L E+ EA +
Sbjct: 364 YQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYPEAATLFIDT 423
Query: 254 QERYPQGYWARYVETLVK 271
Q YP R E + K
Sbjct: 424 QRDYPDSK--RAPENMFK 439
Score = 40.5 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 42/126 (33%), Gaps = 7/126 (5%)
Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
+ QY+ + + + + + Y A +G +G
Sbjct: 355 PTDDNPNSLYQAAYQYLMSGDYKAAEAGFREHVKRYPA--DPMTAEARFWLGESLYGQGR 412
Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
Y A F +Y D++ A E M +L A + D A + I +RYP +
Sbjct: 413 YPEAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATFAQIPQRYP-----KA 467
Query: 266 VETLVK 271
++K
Sbjct: 468 APAILK 473
Score = 39.0 bits (88), Expect = 0.69, Method: Composition-based stats.
Identities = 21/118 (17%), Positives = 44/118 (37%), Gaps = 8/118 (6%)
Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
+Y+ A +L ++ A F + + +P + ++ Y G+Y +A
Sbjct: 357 DDNPNSLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYPEA 416
Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
A+L + YP+SK + +GM+ + ++I +RY
Sbjct: 417 ATLFIDTQRDYPDSKRAPENMFKLGMA--------LEKMDNHDVACATFAQIPQRYPK 466
>gi|254714555|ref|ZP_05176366.1| TPR repeat-containing protein [Brucella ceti M644/93/1]
gi|254717452|ref|ZP_05179263.1| TPR repeat-containing protein [Brucella ceti M13/05/1]
Length = 484
Score = 41.7 bits (95), Expect = 0.10, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 27/78 (34%), Gaps = 2/78 (2%)
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+ YL G+Y AA F+ + Y EA L E+ EA +
Sbjct: 364 YQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYPEAATLFIDT 423
Query: 254 QERYPQGYWARYVETLVK 271
Q YP R E + K
Sbjct: 424 QRDYPDSK--RAPENMFK 439
Score = 40.5 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 42/126 (33%), Gaps = 7/126 (5%)
Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
+ QY+ + + + + + Y A +G +G
Sbjct: 355 PTDDNPNSLYQAAYQYLMSGDYKAAEAGFREHVKRYPA--DPMTAEARFWLGESLYGQGR 412
Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
Y A F +Y D++ A E M +L A + D A + I +RYP +
Sbjct: 413 YPEAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATFAQIPQRYP-----KA 467
Query: 266 VETLVK 271
++K
Sbjct: 468 APAILK 473
Score = 39.0 bits (88), Expect = 0.69, Method: Composition-based stats.
Identities = 21/118 (17%), Positives = 44/118 (37%), Gaps = 8/118 (6%)
Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
+Y+ A +L ++ A F + + +P + ++ Y G+Y +A
Sbjct: 357 DDNPNSLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYPEA 416
Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
A+L + YP+SK + +GM+ + ++I +RY
Sbjct: 417 ATLFIDTQRDYPDSKRAPENMFKLGMA--------LEKMDNHDVACATFAQIPQRYPK 466
>gi|254703472|ref|ZP_05165300.1| TPR repeat-containing protein [Brucella suis bv. 3 str. 686]
Length = 484
Score = 41.7 bits (95), Expect = 0.10, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 27/78 (34%), Gaps = 2/78 (2%)
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+ YL G+Y AA F+ + Y EA L E+ EA +
Sbjct: 364 YQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYPEAATLFIDT 423
Query: 254 QERYPQGYWARYVETLVK 271
Q YP R E + K
Sbjct: 424 QRDYPDSK--RAPENMFK 439
Score = 40.5 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 42/126 (33%), Gaps = 7/126 (5%)
Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
+ QY+ + + + + + Y A +G +G
Sbjct: 355 PTDDNPNSLYQAAYQYLMSGDYKAAEAGFREHVKRYPA--DPMTAEARFWLGESLYGQGR 412
Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
Y A F +Y D++ A E M +L A + D A + I +RYP +
Sbjct: 413 YPEAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATFAQIPQRYP-----KA 467
Query: 266 VETLVK 271
++K
Sbjct: 468 APAILK 473
Score = 39.0 bits (88), Expect = 0.69, Method: Composition-based stats.
Identities = 21/118 (17%), Positives = 44/118 (37%), Gaps = 8/118 (6%)
Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
+Y+ A +L ++ A F + + +P + ++ Y G+Y +A
Sbjct: 357 DDNPNSLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYPEA 416
Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
A+L + YP+SK + +GM+ + ++I +RY
Sbjct: 417 ATLFIDTQRDYPDSKRAPENMFKLGMA--------LEKMDNHDVACATFAQIPQRYPK 466
>gi|254694355|ref|ZP_05156183.1| TPR repeat-containing protein [Brucella abortus bv. 3 str. Tulya]
Length = 484
Score = 41.7 bits (95), Expect = 0.10, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 27/78 (34%), Gaps = 2/78 (2%)
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+ YL G+Y AA F+ + Y EA L E+ EA +
Sbjct: 364 YQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYPEAATLFIDT 423
Query: 254 QERYPQGYWARYVETLVK 271
Q YP R E + K
Sbjct: 424 QRDYPDSK--RAPENMFK 439
Score = 40.5 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 42/126 (33%), Gaps = 7/126 (5%)
Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
+ QY+ + + + + + Y A +G +G
Sbjct: 355 PTDDNPNSLYQAAYQYLMSGDYKAAEAGFREHVKRYPA--DPMTAEARFWLGESLYGQGR 412
Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
Y A F +Y D++ A E M +L A + D A + I +RYP +
Sbjct: 413 YPEAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATFAQIPQRYP-----KA 467
Query: 266 VETLVK 271
++K
Sbjct: 468 APAILK 473
Score = 39.0 bits (88), Expect = 0.69, Method: Composition-based stats.
Identities = 21/118 (17%), Positives = 44/118 (37%), Gaps = 8/118 (6%)
Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
+Y+ A +L ++ A F + + +P + ++ Y G+Y +A
Sbjct: 357 DDNPNSLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYPEA 416
Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
A+L + YP+SK + +GM+ + ++I +RY
Sbjct: 417 ATLFIDTQRDYPDSKRAPENMFKLGMA--------LEKMDNHDVACATFAQIPQRYPK 466
>gi|189024785|ref|YP_001935553.1| TPR repeat-containing protein [Brucella abortus S19]
gi|237816071|ref|ZP_04595067.1| tol-pal system protein YbgF [Brucella abortus str. 2308 A]
gi|254689862|ref|ZP_05153116.1| TPR repeat-containing protein [Brucella abortus bv. 6 str. 870]
gi|254698013|ref|ZP_05159841.1| TPR repeat-containing protein [Brucella abortus bv. 2 str. 86/8/59]
gi|254700355|ref|ZP_05162183.1| TPR repeat-containing protein [Brucella suis bv. 5 str. 513]
gi|254708439|ref|ZP_05170267.1| TPR repeat-containing protein [Brucella pinnipedialis M163/99/10]
gi|254708708|ref|ZP_05170519.1| TPR repeat-containing protein [Brucella pinnipedialis B2/94]
gi|254730897|ref|ZP_05189475.1| TPR repeat-containing protein [Brucella abortus bv. 4 str. 292]
gi|256030234|ref|ZP_05443848.1| TPR repeat-containing protein [Brucella pinnipedialis M292/94/1]
gi|256061731|ref|ZP_05451868.1| TPR repeat-containing protein [Brucella neotomae 5K33]
gi|256114262|ref|ZP_05455007.1| TPR repeat-containing protein [Brucella melitensis bv. 3 str.
Ether]
gi|256160409|ref|ZP_05458098.1| TPR repeat-containing protein [Brucella ceti M490/95/1]
gi|256255615|ref|ZP_05461151.1| TPR repeat-containing protein [Brucella ceti B1/94]
gi|256258116|ref|ZP_05463652.1| TPR repeat-containing protein [Brucella abortus bv. 9 str. C68]
gi|260167909|ref|ZP_05754720.1| TPR repeat-containing protein [Brucella sp. F5/99]
gi|294850946|ref|ZP_06791622.1| TPR repeat containing exported protein [Brucella sp. NVSL 07-0026]
gi|189020357|gb|ACD73079.1| TPR repeat-containing protein [Brucella abortus S19]
gi|237788734|gb|EEP62946.1| tol-pal system protein YbgF [Brucella abortus str. 2308 A]
gi|294821589|gb|EFG38585.1| TPR repeat containing exported protein [Brucella sp. NVSL 07-0026]
gi|326539414|gb|ADZ87629.1| tol-pal system protein YbgF [Brucella melitensis M5-90]
Length = 484
Score = 41.7 bits (95), Expect = 0.10, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 27/78 (34%), Gaps = 2/78 (2%)
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+ YL G+Y AA F+ + Y EA L E+ EA +
Sbjct: 364 YQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYPEAATLFIDT 423
Query: 254 QERYPQGYWARYVETLVK 271
Q YP R E + K
Sbjct: 424 QRDYPDSK--RAPENMFK 439
Score = 40.5 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 42/126 (33%), Gaps = 7/126 (5%)
Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
+ QY+ + + + + + Y A +G +G
Sbjct: 355 PTDDNPNSLYQAAYQYLMSGDYKAAEAGFREHVKRYPA--DPMTAEARFWLGESLYGQGR 412
Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
Y A F +Y D++ A E M +L A + D A + I +RYP +
Sbjct: 413 YPEAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATFAQIPQRYP-----KA 467
Query: 266 VETLVK 271
++K
Sbjct: 468 APAILK 473
Score = 39.0 bits (88), Expect = 0.69, Method: Composition-based stats.
Identities = 21/118 (17%), Positives = 44/118 (37%), Gaps = 8/118 (6%)
Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
+Y+ A +L ++ A F + + +P + ++ Y G+Y +A
Sbjct: 357 DDNPNSLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYPEA 416
Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
A+L + YP+SK + +GM+ + ++I +RY
Sbjct: 417 ATLFIDTQRDYPDSKRAPENMFKLGMA--------LEKMDNHDVACATFAQIPQRYPK 466
>gi|163845273|ref|YP_001622928.1| tol-pal system protein YbgF [Brucella suis ATCC 23445]
gi|163675996|gb|ABY40106.1| tol-pal system protein YbgF [Brucella suis ATCC 23445]
Length = 465
Score = 41.7 bits (95), Expect = 0.10, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 27/78 (34%), Gaps = 2/78 (2%)
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+ YL G+Y AA F+ + Y EA L E+ EA +
Sbjct: 345 YQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYPEAATLFIDT 404
Query: 254 QERYPQGYWARYVETLVK 271
Q YP R E + K
Sbjct: 405 QRDYPDSK--RAPENMFK 420
Score = 40.5 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 42/126 (33%), Gaps = 7/126 (5%)
Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
+ QY+ + + + + + Y A +G +G
Sbjct: 336 PTDDNPNSLYQAAYQYLMSGDYKAAEAGFREHVKRYPA--DPMTAEARFWLGESLYGQGR 393
Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
Y A F +Y D++ A E M +L A + D A + I +RYP +
Sbjct: 394 YPEAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATFAQIPQRYP-----KA 448
Query: 266 VETLVK 271
++K
Sbjct: 449 APAILK 454
Score = 39.0 bits (88), Expect = 0.69, Method: Composition-based stats.
Identities = 21/118 (17%), Positives = 44/118 (37%), Gaps = 8/118 (6%)
Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
+Y+ A +L ++ A F + + +P + ++ Y G+Y +A
Sbjct: 338 DDNPNSLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYPEA 397
Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
A+L + YP+SK + +GM+ + ++I +RY
Sbjct: 398 ATLFIDTQRDYPDSKRAPENMFKLGMA--------LEKMDNHDVACATFAQIPQRYPK 447
>gi|148559585|ref|YP_001259547.1| TPR repeat-containing molluscan rhodopsin [Brucella ovis ATCC
25840]
gi|148370842|gb|ABQ60821.1| TPR repeat:Molluscan rhodopsin C- tail [Brucella ovis ATCC 25840]
Length = 488
Score = 41.7 bits (95), Expect = 0.10, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 27/78 (34%), Gaps = 2/78 (2%)
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+ YL G+Y AA F+ + Y EA L E+ EA +
Sbjct: 368 YQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYPEAATLFIDT 427
Query: 254 QERYPQGYWARYVETLVK 271
Q YP R E + K
Sbjct: 428 QRDYPDSK--RAPENMFK 443
Score = 40.5 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 42/126 (33%), Gaps = 7/126 (5%)
Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
+ QY+ + + + + + Y A +G +G
Sbjct: 359 PTDDNPNSLYQAAYQYLMSGDYKAAEAGFREHVKRYPA--DPMTAEARFWLGESLYGQGR 416
Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
Y A F +Y D++ A E M +L A + D A + I +RYP +
Sbjct: 417 YPEAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATFAQIPQRYP-----KA 471
Query: 266 VETLVK 271
++K
Sbjct: 472 APAILK 477
Score = 39.0 bits (88), Expect = 0.69, Method: Composition-based stats.
Identities = 21/118 (17%), Positives = 44/118 (37%), Gaps = 8/118 (6%)
Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
+Y+ A +L ++ A F + + +P + ++ Y G+Y +A
Sbjct: 361 DDNPNSLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYPEA 420
Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
A+L + YP+SK + +GM+ + ++I +RY
Sbjct: 421 ATLFIDTQRDYPDSKRAPENMFKLGMA--------LEKMDNHDVACATFAQIPQRYPK 470
>gi|94501126|ref|ZP_01307649.1| type IV pilus biogenesis protein PilF [Oceanobacter sp. RED65]
gi|94426702|gb|EAT11687.1| type IV pilus biogenesis protein PilF [Oceanobacter sp. RED65]
Length = 256
Score = 41.7 bits (95), Expect = 0.10, Method: Composition-based stats.
Identities = 32/255 (12%), Positives = 65/255 (25%), Gaps = 16/255 (6%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVY-EKAVLFLKEQNFSKAYEY 79
+ I V L G + D D E Y V +++ N A
Sbjct: 1 MKIIQILGLTGVLLLSGC--VTVTDSRFTKKADPDKAAETYVALGVGYIQSGNLPMAR-- 56
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
+ R + + G+ + A + + + +Y Y +
Sbjct: 57 -TKIERALEINDDYAAAHSAMGLYWMNRGEPELAQQKFQTALDIDDDHSPSNYHYGRFLL 115
Query: 140 SYAQMIRDVPYDQRATKL--------MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
Y +A K + + R+ A +
Sbjct: 116 LQKNDPAACEYLAKAAKDVDYEARIIAYEDLGVCHYRFDQQRLAIDAFERAWTINSDSTV 175
Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA--EHAEEAMARLVEAYVALALMDEAREV 249
+ + Y++R A FQ D +H E++ A +
Sbjct: 176 ACLNLAGIYMERNRLDLATRWFQRFERIIQDNGVQHNAESLYLGARIGKASGDKNAQASY 235
Query: 250 VSLIQERYPQGYWAR 264
+++R+P +
Sbjct: 236 AFKLRKRFPNSEEYQ 250
>gi|23502551|ref|NP_698678.1| hypothetical protein BR1693 [Brucella suis 1330]
gi|62290565|ref|YP_222358.1| hypothetical protein BruAb1_1678 [Brucella abortus bv. 1 str.
9-941]
gi|82700481|ref|YP_415055.1| TPR repeat-containing molluscan rhodopsin [Brucella melitensis
biovar Abortus 2308]
gi|161619623|ref|YP_001593510.1| tol-pal system protein YbgF [Brucella canis ATCC 23365]
gi|225628262|ref|ZP_03786296.1| tol-pal system protein YbgF [Brucella ceti str. Cudo]
gi|225853149|ref|YP_002733382.1| Tol-Pal system protein YbgF [Brucella melitensis ATCC 23457]
gi|256370102|ref|YP_003107613.1| hypothetical protein BMI_I1713 [Brucella microti CCM 4915]
gi|260568780|ref|ZP_05839248.1| TPR repeat-containing protein [Brucella suis bv. 4 str. 40]
gi|260755393|ref|ZP_05867741.1| tol-Pal system YbgF [Brucella abortus bv. 6 str. 870]
gi|260758614|ref|ZP_05870962.1| tol-Pal system YbgF [Brucella abortus bv. 4 str. 292]
gi|260762447|ref|ZP_05874784.1| tol-Pal system YbgF [Brucella abortus bv. 2 str. 86/8/59]
gi|260884409|ref|ZP_05896023.1| tol-Pal system YbgF [Brucella abortus bv. 9 str. C68]
gi|261222818|ref|ZP_05937099.1| tol-Pal system YbgF [Brucella ceti B1/94]
gi|261315939|ref|ZP_05955136.1| tol-Pal system YbgF [Brucella pinnipedialis M163/99/10]
gi|261316199|ref|ZP_05955396.1| tol-Pal system YbgF [Brucella pinnipedialis B2/94]
gi|261325735|ref|ZP_05964932.1| tol-Pal system YbgF [Brucella neotomae 5K33]
gi|261750849|ref|ZP_05994558.1| tol-Pal system YbgF [Brucella suis bv. 5 str. 513]
gi|261757347|ref|ZP_06001056.1| TPR repeat-containing protein [Brucella sp. F5/99]
gi|265987262|ref|ZP_06099819.1| tol-Pal system YbgF [Brucella pinnipedialis M292/94/1]
gi|265995566|ref|ZP_06108123.1| tol-Pal system YbgF [Brucella melitensis bv. 3 str. Ether]
gi|265998777|ref|ZP_06111334.1| tol-Pal system YbgF [Brucella ceti M490/95/1]
gi|265999342|ref|ZP_05465891.2| TPR repeat-containing protein [Brucella melitensis bv. 2 str. 63/9]
gi|297248965|ref|ZP_06932673.1| periplasmic protein [Brucella abortus bv. 5 str. B3196]
gi|23348551|gb|AAN30593.1| conserved domain protein [Brucella suis 1330]
gi|62196697|gb|AAX74997.1| conserved domain protein [Brucella abortus bv. 1 str. 9-941]
gi|82616582|emb|CAJ11661.1| TPR repeat:Molluscan rhodopsin C-terminal tail [Brucella melitensis
biovar Abortus 2308]
gi|161336434|gb|ABX62739.1| tol-pal system protein YbgF [Brucella canis ATCC 23365]
gi|225616108|gb|EEH13156.1| tol-pal system protein YbgF [Brucella ceti str. Cudo]
gi|225641514|gb|ACO01428.1| tol-pal system protein YbgF [Brucella melitensis ATCC 23457]
gi|256000265|gb|ACU48664.1| hypothetical protein BMI_I1713 [Brucella microti CCM 4915]
gi|260154164|gb|EEW89246.1| TPR repeat-containing protein [Brucella suis bv. 4 str. 40]
gi|260668932|gb|EEX55872.1| tol-Pal system YbgF [Brucella abortus bv. 4 str. 292]
gi|260672873|gb|EEX59694.1| tol-Pal system YbgF [Brucella abortus bv. 2 str. 86/8/59]
gi|260675501|gb|EEX62322.1| tol-Pal system YbgF [Brucella abortus bv. 6 str. 870]
gi|260873937|gb|EEX81006.1| tol-Pal system YbgF [Brucella abortus bv. 9 str. C68]
gi|260921402|gb|EEX88055.1| tol-Pal system YbgF [Brucella ceti B1/94]
gi|261295422|gb|EEX98918.1| tol-Pal system YbgF [Brucella pinnipedialis B2/94]
gi|261301715|gb|EEY05212.1| tol-Pal system YbgF [Brucella neotomae 5K33]
gi|261304965|gb|EEY08462.1| tol-Pal system YbgF [Brucella pinnipedialis M163/99/10]
gi|261737331|gb|EEY25327.1| TPR repeat-containing protein [Brucella sp. F5/99]
gi|261740602|gb|EEY28528.1| tol-Pal system YbgF [Brucella suis bv. 5 str. 513]
gi|262553466|gb|EEZ09235.1| tol-Pal system YbgF [Brucella ceti M490/95/1]
gi|262766850|gb|EEZ12468.1| tol-Pal system YbgF [Brucella melitensis bv. 3 str. Ether]
gi|263093358|gb|EEZ17427.1| TPR repeat-containing protein [Brucella melitensis bv. 2 str. 63/9]
gi|264659459|gb|EEZ29720.1| tol-Pal system YbgF [Brucella pinnipedialis M292/94/1]
gi|297174098|gb|EFH33455.1| periplasmic protein [Brucella abortus bv. 5 str. B3196]
gi|326409707|gb|ADZ66772.1| Tol-Pal system protein YbgF [Brucella melitensis M28]
Length = 488
Score = 41.7 bits (95), Expect = 0.10, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 27/78 (34%), Gaps = 2/78 (2%)
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+ YL G+Y AA F+ + Y EA L E+ EA +
Sbjct: 368 YQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYPEAATLFIDT 427
Query: 254 QERYPQGYWARYVETLVK 271
Q YP R E + K
Sbjct: 428 QRDYPDSK--RAPENMFK 443
Score = 40.5 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 42/126 (33%), Gaps = 7/126 (5%)
Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
+ QY+ + + + + + Y A +G +G
Sbjct: 359 PTDDNPNSLYQAAYQYLMSGDYKAAEAGFREHVKRYPA--DPMTAEARFWLGESLYGQGR 416
Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
Y A F +Y D++ A E M +L A + D A + I +RYP +
Sbjct: 417 YPEAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATFAQIPQRYP-----KA 471
Query: 266 VETLVK 271
++K
Sbjct: 472 APAILK 477
Score = 39.0 bits (88), Expect = 0.69, Method: Composition-based stats.
Identities = 21/118 (17%), Positives = 44/118 (37%), Gaps = 8/118 (6%)
Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
+Y+ A +L ++ A F + + +P + ++ Y G+Y +A
Sbjct: 361 DDNPNSLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYPEA 420
Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
A+L + YP+SK + +GM+ + ++I +RY
Sbjct: 421 ATLFIDTQRDYPDSKRAPENMFKLGMA--------LEKMDNHDVACATFAQIPQRYPK 470
>gi|332975199|gb|EGK12099.1| hypothetical protein HMPREF0476_0098 [Kingella kingae ATCC 23330]
Length = 231
Score = 41.7 bits (95), Expect = 0.10, Method: Composition-based stats.
Identities = 15/69 (21%), Positives = 26/69 (37%)
Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
+ K G + I Q ++ + A EA+ + + + D A+E + RY
Sbjct: 152 QSNQKLGYCQSVIQIGQRFATLFAQHDFAPEALYAVGQCQWQIQQRDIAKETWRNLVLRY 211
Query: 258 PQGYWARYV 266
P AR
Sbjct: 212 PNTPAARRA 220
>gi|186686367|ref|YP_001869563.1| TPR repeat-containing serine/threonin protein kinase [Nostoc
punctiforme PCC 73102]
gi|186468819|gb|ACC84620.1| serine/threonine protein kinase with TPR repeats [Nostoc
punctiforme PCC 73102]
Length = 709
Score = 41.7 bits (95), Expect = 0.10, Method: Composition-based stats.
Identities = 28/208 (13%), Positives = 57/208 (27%), Gaps = 9/208 (4%)
Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
Y+K + + +A + + P A +L + A
Sbjct: 467 EAWYKKGLALQNSNRYEEAIAAYQKVVDLKPDYEQAWYNLGNALVNLQHYQDAFNAYDKA 526
Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ-YMSRIVERYTNSPYVK 176
+Y + Y ++ L Y + I + Q + + + N Y +
Sbjct: 527 VQYKSSYYQAWFSRGNTLLNLRRYPEAIESFNQVIKYNPNSYQAWFNLGWSLHQNQRYEE 586
Query: 177 GARFYVTVGRNQLAAKEVEI--GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234
+ Y + ++ G +Y AI + + D E+
Sbjct: 587 AIKSYNKAATLKSKDYQLWYNLGNSQYILQKYEDAIASYNKAVRYKPDHS---ESWYSRG 643
Query: 235 EAYVALALMDEA-REVVSLIQE--RYPQ 259
A + L +A I+ Y Q
Sbjct: 644 NALLNLKRFQDAIASYDRAIKYKPNYQQ 671
>gi|254409688|ref|ZP_05023469.1| SLEI family [Microcoleus chthonoplastes PCC 7420]
gi|196183685|gb|EDX78668.1| SLEI family [Microcoleus chthonoplastes PCC 7420]
Length = 2060
Score = 41.7 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 20/196 (10%), Positives = 48/196 (24%), Gaps = 10/196 (5%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
Y+ ++ + A + NQ + + + +
Sbjct: 1670 DDQPNIADAYYQLGRIYQDWGKYEDAIAHHNQSLELCEQLDKQQDVASLWYNLADCYRNW 1729
Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
Q E + +D + + + + + + + +E Y
Sbjct: 1730 GQYEKAIECKQKDLAICQQLDDQSNIADAYFQFGRIYQDWGKYF--EAIAHYQQSLELYE 1787
Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
K + R + + + + I + +L D H A
Sbjct: 1788 QLDKQKDVANQW--------YNLADCYRNWGQYEKAIECIQKCLAILQQIEDQLHIASAY 1839
Query: 231 ARLVEAYVALALMDEA 246
+L Y +EA
Sbjct: 1840 YQLGRIYQDWGKYEEA 1855
Score = 41.7 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 18/196 (9%), Positives = 46/196 (23%), Gaps = 12/196 (6%)
Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
R Y+ ++ + A ++ Q + + ++ +
Sbjct: 1511 DQPRIASAYYQFGRIYQDWGKYEDAIAHYQQSLELYEQLDKRKDVADSWYWLAACYRDWG 1570
Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS-RIVERYT 170
Q E + +D + Y + + + S + E+
Sbjct: 1571 QYEKAIECEQKDLAIRQQLDDQPRIASAYYQFGRIYQDWGKYEDAIAHHQQSLELYEQLD 1630
Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
V + +++ E I D + +A
Sbjct: 1631 KQKDVADSWYWLAACYRDWGQYEKAIECEQTDLAIRQQL-----------DDQPNIADAY 1679
Query: 231 ARLVEAYVALALMDEA 246
+L Y ++A
Sbjct: 1680 YQLGRIYQDWGKYEDA 1695
Score = 41.3 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 19/208 (9%), Positives = 52/208 (25%), Gaps = 12/208 (5%)
Query: 41 QSSRDVYLDSVTDVRYQREV--YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
+D+ + D + + Y+ ++ + + A +F Q + +
Sbjct: 1258 CEQKDLAICQQLDDQPGIALAYYQLGRIYQEWGKYEDAIAHFQQSLELYEQLDKQQDVAN 1317
Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
++ + Q E + +D + + + + + +
Sbjct: 1318 QWYWLADCYRDWGQYEKAIECQQKCLAIRQQLDDQPRIALAYFMLGRIYKDWGKYSEAIA 1377
Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
SR + ++Y + K + K +
Sbjct: 1378 HYQQSRELYEQLYKHKDVANQWYRLADCYRNWGKYEKAIECEQKDLAIRQQL-------- 1429
Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEA 246
D A +L Y ++A
Sbjct: 1430 --DDQPRIALAYYQLGRIYQDWGKYEDA 1455
Score = 39.8 bits (90), Expect = 0.46, Method: Composition-based stats.
Identities = 21/204 (10%), Positives = 54/204 (26%), Gaps = 10/204 (4%)
Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
++Y + Y AV + + KA E + L +
Sbjct: 1224 ELYEQLDKQQDVANQWYNLAVCYRDWGQYEKAIECEQKDLAICQQLDDQPGIALAYYQLG 1283
Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
++ + + + +D + + D D + ++ +
Sbjct: 1284 RIYQEWGKYEDAIAHFQQSLELYEQLDKQQD--VANQWYWLADCYRDWGQYEKAIECQQK 1341
Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
+ + + + L + G+Y Y + ++ + + A
Sbjct: 1342 CLAIRQQL----DDQPRIALAYFMLGRIYKDWGKYSEAIAHYQQSRELYEQLYKHKDVAN 1397
Query: 225 HAEEAMARLVEAYVALALMDEARE 248
RL + Y ++A E
Sbjct: 1398 QW----YRLADCYRNWGKYEKAIE 1417
Score = 38.2 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 18/210 (8%), Positives = 47/210 (22%), Gaps = 28/210 (13%)
Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
A+ +L+ + KA + + A ++A Q Q + +
Sbjct: 1087 AMSYLRSNQYEKAIPLLEEITEQNNSGIQAYIDWSLAAAYQGVKKFDQAIDAYQACFEKL 1146
Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL-----------------MLQYMSRIV 166
+ + + + L ++ R
Sbjct: 1147 EAYIEPTALMILWRNRGVCHRLHEKYEQALDCFERMLKIAREVGKPKDESLALYHIGRTY 1206
Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA-------- 218
+ + QL K+ ++ + +++ +
Sbjct: 1207 QDWQKFEQAIDYHQQSLELYEQL-DKQQDVANQWYNLAVCYRDWGQYEKAIECEQKDLAI 1265
Query: 219 --NYSDAEHAEEAMARLVEAYVALALMDEA 246
D A +L Y ++A
Sbjct: 1266 CQQLDDQPGIALAYYQLGRIYQEWGKYEDA 1295
Score = 37.9 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 22/216 (10%), Positives = 50/216 (23%), Gaps = 18/216 (8%)
Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
+Y + Q F +A +Y Q + + + + Q E
Sbjct: 1198 ALYHIGRTYQDWQKFEQAIDYHQQSLELYEQLDKQQDVANQWYNLAVCYRDWGQYEKAIE 1257
Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
+ +D + Y + + + + + + +E Y +
Sbjct: 1258 CEQKDLAICQQLDDQPGIALAYYQLGRIYQEWGK--YEDAIAHFQQSLELYEQLDKQQDV 1315
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
+ R + + + + + + D A L Y
Sbjct: 1316 ANQWYWLA--------DCYRDWGQYEKAIECQQKCLAIRQQLDDQPRIALAYFMLGRIYK 1367
Query: 239 ALALMDEA--------REVVSLIQERYPQGYWARYV 266
EA L + + W R
Sbjct: 1368 DWGKYSEAIAHYQQSRELYEQLYKHKDVANQWYRLA 1403
>gi|118375735|ref|XP_001021051.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89302818|gb|EAS00806.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 443
Score = 41.7 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 23/218 (10%), Positives = 55/218 (25%), Gaps = 7/218 (3%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
D + KAV ++ + F +A + + +
Sbjct: 112 KKDPNNLEVFFNKAVALIENKKFDEAILILMDLINQKYEKAYFKLVDCFVSLNKREEAMK 171
Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM-IRDVPYDQRATKLMLQYMSRIVERY 169
+ + + YA + ++
Sbjct: 172 YLQQYYQINSGDSQKTYLLGEKAIDIQEVDYAVECFEKAVQLDPKHQNACLFLGMTYYNK 231
Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
+ + +G YL++ EY A+ F+ A
Sbjct: 232 KMYEKSIHYYLKTSEINPKNFTCLNGLGIVYLEQKEYEKALQYFEQSCKLEPRFV---PA 288
Query: 230 MARLVEAYVALALMDEAREVVS---LIQERYPQGYWAR 264
+ Y+ + DEA ++ + L+ + YP ++ +
Sbjct: 289 LFHKGYTYLKMGKDDEALKIFNQVILMDKNYPDVFFLK 326
>gi|307718791|ref|YP_003874323.1| hypothetical protein STHERM_c11050 [Spirochaeta thermophila DSM
6192]
gi|306532516|gb|ADN02050.1| hypothetical protein STHERM_c11050 [Spirochaeta thermophila DSM
6192]
Length = 272
Score = 41.7 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 24/124 (19%), Positives = 40/124 (32%), Gaps = 3/124 (2%)
Query: 151 DQRATKLMLQYMSRI---VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
D L + +I + Y + A + GR G+Y
Sbjct: 67 DSPVYLEALFWYGKICLTLGEYDEARESLEAFLLRGGSHPLYEEALYQKGRLLYLEGDYQ 126
Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
+ I F LA+Y ++ A+ E+ +L EAR + I E Y A
Sbjct: 127 SCISHFNAFLASYPTSQFVPNALYWSAESLFSLGHFTEARPLYEHIVENYRSSPKAEAAR 186
Query: 268 TLVK 271
++
Sbjct: 187 YRME 190
>gi|302035770|ref|YP_003796092.1| hypothetical protein NIDE0388 [Candidatus Nitrospira defluvii]
gi|300603834|emb|CBK40166.1| exported protein of unknown function, TPR domain [Candidatus
Nitrospira defluvii]
Length = 173
Score = 41.7 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 16/118 (13%), Positives = 42/118 (35%), Gaps = 5/118 (4%)
Query: 152 QRATKLMLQYMSRIVERYTNSPYVK-----GARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
+ + R++E + + Y + + A + G + G Y
Sbjct: 35 PQPPDDAHRLYDRVMEEFRHKDYPAALAGFRFFLELHGQSSLSANAQYWKGECQYRMGRY 94
Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
A+ F ++++Y ++ + ++ + Y D+A+ + + +YP A
Sbjct: 95 KDALDSFYSLISDYPMSQKLAASTLKIGQIYTKQGDRDKAQMMFERVTGQYPDSAEAE 152
>gi|134095586|ref|YP_001100661.1| putative transmembrane protein [Herminiimonas arsenicoxydans]
gi|133739489|emb|CAL62540.1| Conserved hypothetical protein; putative TPR repeat [Herminiimonas
arsenicoxydans]
Length = 245
Score = 41.7 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 23/120 (19%), Positives = 43/120 (35%), Gaps = 2/120 (1%)
Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
+QR L + + + + + Y A IG Y + +Y AI
Sbjct: 124 EQRMYDNALALFKAGDYKKSGTAFADFIQRYPQSAYAPSAQY--WIGNAYYAQRDYRNAI 181
Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
Q +L Y A +AM + +Y L A++ + + +YP A+ + +
Sbjct: 182 TAQQALLKKYPANPKAADAMLNIASSYTELKDRTAAKKALESLVAQYPNTPAAQTAKERL 241
Score = 40.2 bits (91), Expect = 0.36, Method: Composition-based stats.
Identities = 16/108 (14%), Positives = 29/108 (26%)
Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
+ + R A + + K G+Y + F +
Sbjct: 93 KDFYVDLDNRLRKLEPQIVAVDGQEASVELSEQRMYDNALALFKAGDYKKSGTAFADFIQ 152
Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
Y + +A A + AY A A + ++YP A
Sbjct: 153 RYPQSAYAPSAQYWIGNAYYAQRDYRNAITAQQALLKKYPANPKAADA 200
Score = 36.7 bits (82), Expect = 3.9, Method: Composition-based stats.
Identities = 12/85 (14%), Positives = 32/85 (37%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
+ ++ +Y+ A+ K ++ K+ F + +P + A + Y+
Sbjct: 117 EASVELSEQRMYDNALALFKAGDYKKSGTAFADFIQRYPQSAYAPSAQYWIGNAYYAQRD 176
Query: 110 YQQAASLGEEYITQYPESKNVDYVY 134
Y+ A + + + +YP +
Sbjct: 177 YRNAITAQQALLKKYPANPKAADAM 201
>gi|254788153|ref|YP_003075582.1| tetratricopeptide repeat domain-containing protein [Teredinibacter
turnerae T7901]
gi|237686893|gb|ACR14157.1| tetratricopeptide repeat domain protein [Teredinibacter turnerae
T7901]
Length = 791
Score = 41.7 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 28/245 (11%), Positives = 60/245 (24%), Gaps = 21/245 (8%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K I + V L + + + +E YE +L++ +S A
Sbjct: 1 MKK---IIPLLVLVAVLTACKSEEEKS------------QEYYESGAAYLEKGEYSSAEL 45
Query: 79 YFN---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
F + + A + S K + + Y+
Sbjct: 46 EFKNALKINPHNTDAQFGTAVIYESKKRWVELEKTLVGILDFDPEYIEARIKLTNLYLGQ 105
Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
+ Q ++ + ++ + + + V +
Sbjct: 106 NKIDKAMVHTEKLMTQQPQNPMVKTLRAAVLYKIDDRDGARNLIDQVLAAHPHYVDAVIL 165
Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
L + + AI L + L++A A V + E
Sbjct: 166 KAHDLLFQDKNSEAIAVLDGALKEQPKSVVL---NIVLLQALNKAGEASRAESVYRTLIE 222
Query: 256 RYPQG 260
YP
Sbjct: 223 IYPDN 227
>gi|189218346|ref|YP_001938988.1| TPR repeats containing protein [Methylacidiphilum infernorum V4]
gi|189185204|gb|ACD82389.1| TPR repeats containing protein [Methylacidiphilum infernorum V4]
Length = 855
Score = 41.7 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 26/234 (11%), Positives = 64/234 (27%), Gaps = 34/234 (14%)
Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
++ K L IF C +G S T + ++E+ + + S+
Sbjct: 13 KMRKRTLKIFLF--FCSFIGCCLGS---------TVGSPEEALFEQIKEAMDDSLLSRTI 61
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
+ + +P + ++ A Y KY++ + + + + +
Sbjct: 62 DLSREFENSYPHSVYLPSVCILHAEALYFQAKYEELIAFLSQKTVSQFSFEELGKEAFWK 121
Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
+Y + + + +
Sbjct: 122 AEAYRALEKWPEAVTEYEIAEKHLLDSSLLEKVWLRKGF--------------------- 160
Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
+ + +A QL+ + EA+ L + + L +EA+E
Sbjct: 161 CLWQEGKVQLAKEVLNQLLHSKNP--AFCAEALLILGKIALNLGKEEEAKEYFQ 212
>gi|327540469|gb|EGF27054.1| hypothetical protein RBWH47_05644 [Rhodopirellula baltica WH47]
Length = 385
Score = 41.7 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 37/218 (16%), Positives = 65/218 (29%), Gaps = 34/218 (15%)
Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
+ D+ T AV ++++ +F A E+ FP + + LM
Sbjct: 180 DQIRYDNPTGRLADDATMAAAVEYMRQGDFETADEFLTDLRETFPESDHFFNAHLMGIRC 239
Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
+ + A KL+ Q
Sbjct: 240 KLEVFAGP---------------------------------KYSGLMLEEADKLVRQTRE 266
Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
R +R + + + A K + Y KR EY AA +Q++L +Y
Sbjct: 267 RFPDRLRDPETSEMVARAAAEVAYRRAEKLNDRAIYREKRSEYGAARLHYQMILRDYPST 326
Query: 224 EHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
A+ A RL + E R +L++ +P
Sbjct: 327 PFADRARQRLEAITSYPDVPAE-RVSATLLKRIFPDSR 363
>gi|168000971|ref|XP_001753189.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695888|gb|EDQ82230.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 383
Score = 41.7 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 29/242 (11%), Positives = 62/242 (25%), Gaps = 9/242 (3%)
Query: 27 FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86
F I++ L G+ + SV + ++A+ + KA F++ +
Sbjct: 122 LFGISLPLLAGFASNLEAEAASRSVRLKDVEYPKLQEALRAAVAGDLEKAETMFSELIEE 181
Query: 87 FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146
P + + + + + P + Y + I
Sbjct: 182 DPKSASVWSNRGSVRVSLQKYEQAAEDFTKAIALAPDAPVPFLNRAISYEAMGRFDDAIA 241
Query: 147 DVPYDQRATKL---MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
D + + R + A + +A ++ +
Sbjct: 242 DCKTAIINDPEEYAAWFNLGNVEVRVRDYDAALNAYSRASRLAPGIAGYRLKEALVLFEL 301
Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR---EVVSLIQERYPQG 260
Q ++ Y + EA A L D A ++ + RY
Sbjct: 302 NRLEECRKLVQGLVRKYPNY---AEAHAVLAAVLWKEGNRDLAEGQFSEATVREPRYKDI 358
Query: 261 YW 262
W
Sbjct: 359 RW 360
>gi|163816722|ref|ZP_02208085.1| hypothetical protein COPEUT_02912 [Coprococcus eutactus ATCC 27759]
gi|158447979|gb|EDP24974.1| hypothetical protein COPEUT_02912 [Coprococcus eutactus ATCC 27759]
Length = 552
Score = 41.7 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 12/91 (13%), Positives = 29/91 (31%)
Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
Y L+ + + + E ++ + D +++ A+
Sbjct: 338 NQISKYGDYASQVLSDDNKARVQSAISKYENMSYEAAMDDLNRVLQDTPNSDVALYYKGM 397
Query: 236 AYVALALMDEAREVVSLIQERYPQGYWARYV 266
Y+ L+ + A V + + E P + Y
Sbjct: 398 CYLKLSDENNATLVFNQLVENCPNSVYYAYA 428
>gi|194211573|ref|XP_001490817.2| PREDICTED: similar to FK506-binding protein 4 (Peptidyl-prolyl
cis-trans isomerase) (PPIase) (Rotamase) (p59 protein)
(HSP-binding immunophilin) (HBI) (FKBP52 protein) (52
kDa FK506-binding protein) (FKBP59) [Equus caballus]
Length = 560
Score = 41.7 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 31/226 (13%), Positives = 71/226 (31%), Gaps = 14/226 (6%)
Query: 48 LDSVTDVRYQREVYEKAVLFLKEQN---------FSKAYEYFNQCSRDFPFAGVARKSLL 98
++ + Y+ +++++ + + KA + + + +
Sbjct: 271 VEVALEGYYKDQLFDRREVHFEVGEGENLDLPCGLEKAIQRMEKGEHSIVYLKPSYAFGS 330
Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
+ + + + ES ++ L + + V + + K
Sbjct: 331 AGKEKFQIPPNAELKYEVHLKSFEKAKESWEMNSEEKLEQSTIVKERGTVYFKEGKYKQA 390
Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
L +IV V + A + + +LK + AAI L
Sbjct: 391 LLQYKKIVSWLEYESSFSD--EDVQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALE 448
Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
S+ E+ + R EA++A+ D AR + + YP A+
Sbjct: 449 LDSN---NEKGLFRRGEAHLAVNDFDLARADFQKVLQLYPSNKAAK 491
>gi|187918083|ref|YP_001883646.1| surface-located membrane protein 1 [Borrelia hermsii DAH]
gi|119860931|gb|AAX16726.1| surface-located membrane protein 1 [Borrelia hermsii DAH]
Length = 784
Score = 41.7 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 19/220 (8%), Positives = 59/220 (26%)
Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
+ + ++Y V+ + Y+ ++ K + + +A + F + P A + S
Sbjct: 424 KKAEEIYEKIVSITNNAEDHYKVGIIKFKLKKYEEAIKAFGKTISLNPKHKKAYTNKGTS 483
Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
+ + +A Y + + TK
Sbjct: 484 LILSNKPKQAIEAFKKAITIDKNYDNAYYKKGIAEEQNDDKQNAFLSFKKAYGITKNPHY 543
Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220
+ + + ++ + ++ + + + E + +
Sbjct: 544 ALKAGIIANHIGDFKNSEKYLDKARASIKEKNDIMLYNLAIAKFENNNLNESLKTINQAL 603
Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
E + Y+ +EA + + + + P
Sbjct: 604 VINPKKPEYLYLKASIYLTKENYNEAIPLYNAVILKNPDN 643
>gi|88812660|ref|ZP_01127907.1| tfp pilus assembly protein PilF [Nitrococcus mobilis Nb-231]
gi|88790076|gb|EAR21196.1| tfp pilus assembly protein PilF [Nitrococcus mobilis Nb-231]
Length = 257
Score = 41.7 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 22/253 (8%), Positives = 64/253 (25%), Gaps = 12/253 (4%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ ++A + + G S + + + + +L+ +A
Sbjct: 1 MRRYAAVLLTVCNMVLAAGCATDS-KPRPSPEALQKASEINT-QIGIRYLQTGELQQAVR 58
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+ + A +L + + + +A + S +Y +L
Sbjct: 59 KLEKALKQDAGNADAHMTLGV-VYERLDETVQARAHYRRAIELQPNNSSALNNYGQFLCE 117
Query: 139 MSYAQMIRDVPYDQRATKLM------LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
+ L + ++ + + +
Sbjct: 118 RDEYDRAERLFLRAAENPTYESPQVPLANAGVCAIQDGDTKRAEDFFLRALKYEPRFPSA 177
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ + +++A +Q LA + + + AL D L
Sbjct: 178 LAHMAQLRFDGRHFLSARGYYQRYLAVARQSPST---LWLGIRLEHALGDKDAVASYKLL 234
Query: 253 IQERYPQGYWARY 265
++ ++P R
Sbjct: 235 LKGKFPDSIQTRQ 247
>gi|166365801|ref|YP_001658074.1| serine/threonine protein kinase [Microcystis aeruginosa NIES-843]
gi|166088174|dbj|BAG02882.1| serine/threonine protein kinase [Microcystis aeruginosa NIES-843]
Length = 707
Score = 41.7 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 19/215 (8%), Positives = 59/215 (27%), Gaps = 6/215 (2%)
Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99
+ + + + Y+K +++ A + ++Q +
Sbjct: 452 SAAQKALEKLLTFQQNDAKIWYKKGWSLQNLEDYEGAVKAYDQALALESDNALIWYQKAN 511
Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA---QMIRDVPYDQRATK 156
S + ++ S ++ Q+ ++ + + +
Sbjct: 512 SLYQLNKINDALESYSKAGQFNPQFSQAHYSQGIILQKLGRKSEALEAFTQATKANSNYY 571
Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
++ + + +Q A + IG + + G+Y AI +Q
Sbjct: 572 QAWLNQGALLHQMERFQEAIASYEKARRISSQKAEVFIGIGNAWYRLGDYSQAIIAYQQA 631
Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
+ D +++ + L + A +
Sbjct: 632 IQRQKDNPETWKSL---GNSCFKLGQYERAIQAYQ 663
>gi|114771184|ref|ZP_01448604.1| hypothetical protein OM2255_07505 [alpha proteobacterium HTCC2255]
gi|114548109|gb|EAU50996.1| hypothetical protein OM2255_07505 [alpha proteobacterium HTCC2255]
Length = 508
Score = 41.7 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 24/207 (11%), Positives = 65/207 (31%), Gaps = 19/207 (9%)
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
Y+ ++ LK+ +F A F++ ++ A +
Sbjct: 312 YDASLELLKQNDFQVALIQFDKLIDITSDDTFLAGVYYSRGDAFTGMQDWKSALRSYLKS 371
Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
D Y + + +P ++ +L + ++ +
Sbjct: 372 YELES-----DGNYAAKALKASYQTALMPLNENNFELAIIQFDSLINVIPSG-------- 418
Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
L A G + + E+ AA + D ++A +A+ + + +
Sbjct: 419 ------PLLTAAHYSKGDAFSELEEWKAAGKSYLESFKLEPDGKYAAKALMNVGISLGKM 472
Query: 241 ALMDEAREVVSLIQERYPQGYWARYVE 267
++EA +++ ++ R+P+ +
Sbjct: 473 QKINEACNILNRVEARFPRNQIVEEAQ 499
>gi|325474068|gb|EGC77256.1| hypothetical protein HMPREF9353_01606 [Treponema denticola F0402]
Length = 517
Score = 41.7 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 15/99 (15%), Positives = 42/99 (42%), Gaps = 5/99 (5%)
Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
+ + + + A++ +++ R Y+ G +A+ + NY + + +EA+ +
Sbjct: 411 EKSESKTSGQDFKSASELLDMIRGYISEGNAASALNSAEDFFKNY--SVNLDEALFLRGQ 468
Query: 236 AYVALA---LMDEAREVVSLIQERYPQGYWARYVETLVK 271
AY + +A E + + YP+ + + ++
Sbjct: 469 AYELNGPNKNIKKALEAYQTLTKAYPESKFWDKADARIR 507
>gi|222054188|ref|YP_002536550.1| hypothetical protein Geob_1089 [Geobacter sp. FRC-32]
gi|221563477|gb|ACM19449.1| conserved hypothetical protein [Geobacter sp. FRC-32]
Length = 149
Score = 41.7 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 29/74 (39%), Gaps = 3/74 (4%)
Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA-YVALALMDEAREVVSLIQERYP 258
G+Y AI RF VL+++ ++ A EA+ + Y +E + YP
Sbjct: 76 DFDNGDYNDAILRFNEVLSSHRNSGAAPEALYLTGVSRYKTSHNAGNLKETYQRLAAEYP 135
Query: 259 QGYWARYV--ETLV 270
W + L+
Sbjct: 136 ASEWVKRASPYNLL 149
>gi|257059198|ref|YP_003137086.1| peptidase S1 and S6 chymotrypsin/Hap [Cyanothece sp. PCC 8802]
gi|256589364|gb|ACV00251.1| peptidase S1 and S6 chymotrypsin/Hap [Cyanothece sp. PCC 8802]
Length = 810
Score = 41.7 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 24/214 (11%), Positives = 52/214 (24%), Gaps = 6/214 (2%)
Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
SV + +++++ K +++A F + P A +L + + Q
Sbjct: 21 PSVVLSQSIDQLFQQGRTAGKMGKYTEAEAIFRRVIELDPNLADAYNNLGNALYYQGKLD 80
Query: 109 KYQQAASLGEEYI---TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
+ A + + Y + +
Sbjct: 81 EAIAAYQKAIQLNPNDADAYNNLGNALYYQGKLEEAIAAYQKAIQLNPNFAQAYNNLGNA 140
Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
+ A +G +G+ AI +Q + +
Sbjct: 141 LSDQGKLEEAIAAYQKAIQLNPNFTQAYYNLGIALSDQGKLEEAIAAYQKAIQLNPNY-- 198
Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
+A L A +DEA + P
Sbjct: 199 -ADAYYNLGVALFDQGKLDEAIAAYQKAIQLDPN 231
Score = 41.3 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 24/211 (11%), Positives = 48/211 (22%), Gaps = 9/211 (4%)
Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
+ Y Y V + +A + + + P A +L + + Q +
Sbjct: 195 NPNYADAYYNLGVALFDQGKLDEAIAAYQKAIQLDPNDANAYNNLGAALYKQGKLEEAIA 254
Query: 113 AASLGEEYI---TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
A + + + V + L + +
Sbjct: 255 AYQKAIQLNPNLAEAYNNLGVALSDQGKRDEAIAAYQKAIQLNPNFALAYNGLGNALSDQ 314
Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
A A +G +G+ AI +Q + + A
Sbjct: 315 GKRDEAIAAYQKAIQLNPNFALAYNGLGNALSDQGKRDEAIAAYQKAIQLDPND---ANA 371
Query: 230 MARLVEAYVALALMDEAREVVSL---IQERY 257
L A DEA + +
Sbjct: 372 YNNLGLALRNQGKRDEAITAYQKAIQLNPNF 402
>gi|268679163|ref|YP_003303594.1| hypothetical protein Sdel_0522 [Sulfurospirillum deleyianum DSM
6946]
gi|268617194|gb|ACZ11559.1| Tetratricopeptide TPR_2 repeat protein [Sulfurospirillum deleyianum
DSM 6946]
Length = 306
Score = 41.7 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 12/82 (14%), Positives = 29/82 (35%)
Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243
+ A +G + Y +AI ++ ++ + A + + ++ L
Sbjct: 223 NRNYKPAKVNFNLGEIAYSKKSYASAIEYYKTSISLFDKAAYIPTLLYHTGTSFEKLGKA 282
Query: 244 DEAREVVSLIQERYPQGYWARY 265
EA+ ++ YP A+
Sbjct: 283 KEAQGFYKALKANYPTSPEAKK 304
>gi|325522841|gb|EGD01310.1| tol-pal system protein YbgF [Burkholderia sp. TJI49]
Length = 249
Score = 41.7 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 19/111 (17%), Positives = 33/111 (29%)
Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
+ +Y + R + V + + + G + AA F+
Sbjct: 94 RQQKEYYQDLDTRLKKFEPQQATIDGVEGTVQPGETDALSAAQQQFRNGNFKAAAASFRS 153
Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
+A Y + + A L A AL + I +YPQ A
Sbjct: 154 FIAKYPQSPYQPTAQYWLGNAQYALRDYRGSTATWQAIVSKYPQHPRAADA 204
Score = 38.2 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 15/125 (12%), Positives = 40/125 (32%), Gaps = 14/125 (11%)
Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
+ K + +Y SPY A++++ G +Y
Sbjct: 136 QQQFRNGNFKAAAASFRSFIAKYPQSPYQPTAQYWL--------------GNAQYALRDY 181
Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
+ +Q +++ Y A +A+ + + A++ + +Y A+
Sbjct: 182 RGSTATWQAIVSKYPQHPRAADALVAIGTNQLEQGQKAAAKKTFEQVVSQYAGSNAAQTA 241
Query: 267 ETLVK 271
+ ++
Sbjct: 242 QGKLE 246
>gi|134294842|ref|YP_001118577.1| hypothetical protein Bcep1808_0730 [Burkholderia vietnamiensis G4]
gi|134137999|gb|ABO53742.1| conserved hypothetical protein [Burkholderia vietnamiensis G4]
Length = 249
Score = 41.7 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 19/111 (17%), Positives = 33/111 (29%)
Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
+ +Y + R + V + + + G + AA F+
Sbjct: 94 RQQKEYYQDLDTRLKKFEPQQATIDGVEGTVQPGETDALSAAQQQFRNGNFKAAAASFRS 153
Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
+A Y + + A L A AL + I +YPQ A
Sbjct: 154 FIAKYPQSPYQPTAQYWLGNAQYALRDYRGSTATWQAIVSKYPQHPRAADA 204
Score = 37.9 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 15/125 (12%), Positives = 40/125 (32%), Gaps = 14/125 (11%)
Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
+ K + +Y SPY A++++ G +Y
Sbjct: 136 QQQFRNGNFKAAAASFRSFIAKYPQSPYQPTAQYWL--------------GNAQYALRDY 181
Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
+ +Q +++ Y A +A+ + + A++ + +Y A+
Sbjct: 182 RGSTATWQAIVSKYPQHPRAADALVAIGTNQLEQGQKAAAKKTFEQVVSQYAGSNAAQTA 241
Query: 267 ETLVK 271
+ ++
Sbjct: 242 QGKIE 246
>gi|260654515|ref|ZP_05860005.1| putative transglycosylase SLT domain protein [Jonquetella anthropi
E3_33 E1]
gi|260630792|gb|EEX48986.1| putative transglycosylase SLT domain protein [Jonquetella anthropi
E3_33 E1]
Length = 709
Score = 41.7 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 19/221 (8%), Positives = 53/221 (23%), Gaps = 5/221 (2%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
++ Y N +A + + +A + ++
Sbjct: 237 KKAPESAKKNYRLGWAAYVAGNNKEAVALLAKVPLKSQWGLLADYTRAVALVRLGQRQDA 296
Query: 111 QQAAS-----LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
+ G+ ++ + A L L +S++
Sbjct: 297 VPLYASLLTPQGKMVRQACQRLSSLTESKDEETAAAATEALVTAASSDDESLALSALSQL 356
Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
R T+ + ++ A + +
Sbjct: 357 SRRSTDQKEWAQEQLDARFPKSPQTADLYWQRGWEHWIAGEAQEALDAWRRAGECKNWSQ 416
Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
+ + +A L DEA++V+ + P ++++
Sbjct: 417 LPKVLYWQAQALQKLDEPDEAKKVLKRLTAEDPYSFYSQIA 457
>gi|120437522|ref|YP_863208.1| hypothetical protein GFO_3198 [Gramella forsetii KT0803]
gi|117579672|emb|CAL68141.1| conserved hypothetical protein, membrane or secreted [Gramella
forsetii KT0803]
Length = 635
Score = 41.7 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 27/232 (11%), Positives = 56/232 (24%), Gaps = 3/232 (1%)
Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF---NQCSRDF 87
+ + R DS + E ++KA E + +A F +
Sbjct: 274 VFLSTIASNEKDIRPFISDSTSIENSAIEYFQKAKKAYSETKYQEAKTNFIKAKELDMLR 333
Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147
A ++ S A+ E ++ + + Y+ + +
Sbjct: 334 FRAPSEINEIIRSFDTYDHVHVVDTEANFTENSPHLSIGNELLVEHVHPNLKGYSLIAYN 393
Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
++ + G ++ + Y +
Sbjct: 394 FYKALEKNNVLELKWQNSWSLEDLRERMPITELDSLQGAYEVMMLKQGWPYYEKLDFDSS 453
Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
++ EEAM L Y + A +V I YP
Sbjct: 454 NLSQPQKIAGRLALRKISWEEAMEALYGYYYQNQDFESALKVSEAITLEYPN 505
>gi|332521272|ref|ZP_08397728.1| Tetratricopeptide TPR_1 repeat-containing protein [Lacinutrix
algicola 5H-3-7-4]
gi|332043000|gb|EGI79198.1| Tetratricopeptide TPR_1 repeat-containing protein [Lacinutrix
algicola 5H-3-7-4]
Length = 1005
Score = 41.7 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 25/215 (11%), Positives = 54/215 (25%), Gaps = 23/215 (10%)
Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
+ Q Y A + K ++++ A +YFN+ P + +
Sbjct: 495 SLKETQNLDYNLAYTYFKLKDYANATQYFNKFISKKPQDQIRLNDAYLRL---------A 545
Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
A + Y + + + + ++ Y
Sbjct: 546 DAHFVSSRYNDAIIAYNQAIEIGKIEADYAYFQKAISYGYLGQANKKITELETFIDTYKA 605
Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231
S A + + + +KE + + + A YS + +
Sbjct: 606 SKLRDDAMYALGNAYVKAGSKEKAMAT--------------YNNLTATYSTSPFVSNTLL 651
Query: 232 RLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
R Y EA + + +P A
Sbjct: 652 RQGLVYYNNNQNQEALTKFKTVAKDFPASAEANQA 686
Score = 35.9 bits (80), Expect = 6.5, Method: Composition-based stats.
Identities = 22/241 (9%), Positives = 62/241 (25%), Gaps = 17/241 (7%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K + IF V + + ++S ++KA+ Q + A
Sbjct: 1 MTKNHIAIFLFSIVLSINAFAQKSETYTN---------PITDFQKALSLYNNQQYLAAQT 51
Query: 79 YFNQCSRDFPF----AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
F++ ++ + A + + + + + + + VD
Sbjct: 52 VFSKIKKNTQEDNIKSDCAYYIANCAVRLNQQNADELIESFVEDYPTSTKKNTAFVDVAD 111
Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
Y + + L + + + + N++ + +
Sbjct: 112 YYFENGKYAYAQKWYDKVDESALARKEREKFYFNNGYTAFTTKNYDDAKTYLNKVESSQE 171
Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDA----EHAEEAMARLVEAYVALALMDEAREVV 250
+ G + + ++ E+ + L EA +
Sbjct: 172 YGSQAKYYIGFMAYQGDDYDKANTYFDQVKDQEKYQEKLSYYQADLNFKLGKFKEAIALA 231
Query: 251 S 251
S
Sbjct: 232 S 232
>gi|295675610|ref|YP_003604134.1| tol-pal system protein YbgF [Burkholderia sp. CCGE1002]
gi|295435453|gb|ADG14623.1| tol-pal system protein YbgF [Burkholderia sp. CCGE1002]
Length = 249
Score = 41.7 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 18/123 (14%), Positives = 42/123 (34%), Gaps = 14/123 (11%)
Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
+ K + +Y +SPY A++++ G +Y
Sbjct: 137 QQFRSGDFKSAAASFRSFISKYPSSPYQPTAQYWL--------------GNALYALRDYK 182
Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
+ +Q ++A Y A EA+ + + A++ + I +Y A+ +
Sbjct: 183 GSTAVWQGIVAKYPQHPRAPEALLAIANNQLEQGQKAAAKKTLEQIVAQYAGSDVAQSAQ 242
Query: 268 TLV 270
+ +
Sbjct: 243 SKL 245
Score = 39.0 bits (88), Expect = 0.73, Method: Composition-based stats.
Identities = 26/175 (14%), Positives = 49/175 (28%)
Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151
+ A + + ++ L T +S +D + V Q
Sbjct: 30 MFDDDQARQAILDLRSKTDSLSSQLSAAQRTILDQSNRLDQLNQQVATLRGQNEDMANQL 89
Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
K Y + + R + V + + G++ +A
Sbjct: 90 TTLQKQQKDYYTDLDTRLKKFEPQQQTVDGVQGEVQPGETEAFNAASQQFRSGDFKSAAA 149
Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
F+ ++ Y + + A L A AL + V I +YPQ A
Sbjct: 150 SFRSFISKYPSSPYQPTAQYWLGNALYALRDYKGSTAVWQGIVAKYPQHPRAPEA 204
>gi|261416344|ref|YP_003250027.1| hypothetical protein Fisuc_1955 [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261372800|gb|ACX75545.1| hypothetical protein Fisuc_1955 [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 638
Score = 41.7 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 35/242 (14%), Positives = 80/242 (33%), Gaps = 17/242 (7%)
Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
++++ D Q + A + + + KA + + + + L+
Sbjct: 222 NAKEIENLNDRERQTAGEQSAECLVNTKEYLKAADEYKALYKVEAYEKQRPHYLVRIGET 281
Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT-------- 155
AG+ A + + T+YP+++ Y+ +G ++
Sbjct: 282 TLLAGRNADAYVIFNKVNTEYPKTEQSSRSYFNMGDYEQSKTQNYELAMSYYDSSYIARS 341
Query: 156 --------KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
+ + R+V + + ++ + ++ A + + + LK E
Sbjct: 342 ISEYAQKSRERRNALRRLVSMRDRNEEILQSKDSIPNMKSFFANEFMIAELFLLKLSEAD 401
Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVA-LALMDEAREVVSLIQERYPQGYWARYV 266
+A+ R V+ D A Y L D A E+ I E+YP +A+
Sbjct: 402 SAVARLTNVIEKSDDTASVMRASYARAFIYDEFLHDPDTAEELYKEIIEKYPNTDYAKQA 461
Query: 267 ET 268
+
Sbjct: 462 QA 463
>gi|148689732|gb|EDL21679.1| transmembrane and tetratricopeptide repeat containing 2 [Mus
musculus]
Length = 719
Score = 41.7 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 18/226 (7%), Positives = 51/226 (22%), Gaps = 10/226 (4%)
Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
++ +Y L+ ++ + +A + + + P +
Sbjct: 470 CSEIPDENLKDPHAHKSSVTSCLYNLGKLYHEQGRYEEALSVYREAIQKMPRHFAPQSLY 529
Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK- 156
M K +A E + + Y + + + +A +
Sbjct: 530 NMMGEAYMRLSKLPEAEHWYMESLRSKTDHIPAHLTYGKLLALTGRKSEAEKFFLKAIEL 589
Query: 157 -----LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
+ + + + N + AA
Sbjct: 590 DPTKGNCYMHYGQFLLEESRLTEAAEMAKKAAELDNTEFDVVFNAAHMLRQASLNEAAEK 649
Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR-EVVSLIQER 256
+ L + A+ L + +A + +Q +
Sbjct: 650 YYDLAARLRPNYPA---ALMNLGAILHLNGRLQKAEANYLRALQLK 692
>gi|116623643|ref|YP_825799.1| TPR repeat-containing protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116226805|gb|ABJ85514.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter
usitatus Ellin6076]
Length = 548
Score = 41.7 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 25/221 (11%), Positives = 55/221 (24%)
Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
++ + + + + KAV E A + D +L +
Sbjct: 18 TPINDLKNQKRANKTLSKAVSLHLEGKLESAARLLTKAIEDGEREPSLYSALGHIQYEMR 77
Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
+ S E +Q+ + V + A M +
Sbjct: 78 DYEAAGRTYSQLSEIDSQHRTAHFNRGVCLGNLKEWKDAADAFRRAFEADASRSDAMLGL 137
Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
+ + A + + E + + + + S
Sbjct: 138 GIALIHDGHPGDALMPLEKYLSLFPNHEQALFGQAVALQQTGRHAESVEQYRKVLSRNPK 197
Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
EEA++ LV ++ + R ++ E P A
Sbjct: 198 CEEALSNLVAMFIEKKDHESVRRYAEMLCELQPDSPVATEA 238
Score = 35.9 bits (80), Expect = 6.8, Method: Composition-based stats.
Identities = 26/203 (12%), Positives = 64/203 (31%), Gaps = 6/203 (2%)
Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
++ A++ ++ A + + + + D P G A L ++ +A
Sbjct: 338 LWNLALVLEQQGERQWAEKLYARINEDAPEWGDACFRLGYLRLLRGDYINSAEAFEACLA 397
Query: 120 YITQYPESKNVD---YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
+ +PE+ Y + + ++V + + ++ ++ +
Sbjct: 398 HRLDWPEAHLNAGIAYARNGNAPAARKSFQEVLTLRPDSSDAVRGLAALALEQEEFTEAY 457
Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
+ G K+G+ A+ +Q L EA+ L A
Sbjct: 458 DLHRRLIELGEHSPELFYNAGLICQKQGQTQDAVGFYQQALNEDPQF---AEALLNLGHA 514
Query: 237 YVALALMDEAREVVSLIQERYPQ 259
+++ +EAR P+
Sbjct: 515 LMSMGQEEEARSYWRRAIREKPE 537
Score = 35.5 bits (79), Expect = 6.9, Method: Composition-based stats.
Identities = 19/247 (7%), Positives = 61/247 (24%), Gaps = 35/247 (14%)
Query: 49 DSVTDVRYQREVYEK-AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107
++ D + +Y + + +++ A ++Q S A + +
Sbjct: 54 KAIEDGEREPSLYSALGHIQYEMRDYEAAGRTYSQLSEIDSQHRTAHFNRGVCLGNLKEW 113
Query: 108 GKYQQAASLGEEYITQYPESK---NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
A E ++ + ++ + + L +
Sbjct: 114 KDAADAFRRAFEADASRSDAMLGLGIALIHDGHPGDALMPLEKYLSLFPNHEQALFGQAV 173
Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
+++ V + + ++++ ++ + +++ D+
Sbjct: 174 ALQQTGRHAESVEQYRKVLSRNPKCEEALSNLVAMFIEKKDHESVRRYAEMLCELQPDSP 233
Query: 225 HAEEAM-------------------------------ARLVEAYVALALMDEAREVVSLI 253
A EA+ L A+ + D+A +
Sbjct: 234 VATEALATLAFQDGDYLSAARHCRTLCESAPDRFENWFNLGVAHHKMGNYDKAAQAYRQA 293
Query: 254 QERYPQG 260
P
Sbjct: 294 ASLQPSS 300
>gi|327399142|ref|YP_004340011.1| tol-pal system protein YbgF [Hippea maritima DSM 10411]
gi|327181771|gb|AEA33952.1| tol-pal system protein YbgF [Hippea maritima DSM 10411]
Length = 261
Score = 41.7 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 12/78 (15%), Positives = 34/78 (43%)
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+ Y +GEY AI + ++ Y + +A + A++ + + ++ +
Sbjct: 181 FYLAESYFAKGEYDRAIINYDYLINTYPKSSKIAKATLKEGLAFIKMGDKVDGNYLLQKV 240
Query: 254 QERYPQGYWARYVETLVK 271
+++P A+ + ++K
Sbjct: 241 IKQFPNSLEAKEAKKILK 258
>gi|108757662|ref|YP_629584.1| TPR repeat-containing protein [Myxococcus xanthus DK 1622]
gi|108461542|gb|ABF86727.1| tetratricopeptide repeat protein [Myxococcus xanthus DK 1622]
Length = 1089
Score = 41.7 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 16/127 (12%), Positives = 41/127 (32%), Gaps = 12/127 (9%)
Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL------------KR 203
+ R++ + N+PY+ +F ++ + + + R
Sbjct: 53 DRAIGETERLISKSRNAPYLPDLQFRLSELYVEKSRYVYYLQAESRPEGASGAIVSPETR 112
Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
A+ + +L Y D + ++ L L DE + + + ++P
Sbjct: 113 LLKQKAVQMYYRLLREYPDFKDGDQVTFYLAHEQRELGQFDEMLKTLGDLTRKFPGSPLR 172
Query: 264 RYVETLV 270
E ++
Sbjct: 173 LEAEQIL 179
>gi|195953482|ref|YP_002121772.1| Tetratricopeptide TPR_2 repeat protein [Hydrogenobaculum sp.
Y04AAS1]
gi|195933094|gb|ACG57794.1| Tetratricopeptide TPR_2 repeat protein [Hydrogenobaculum sp.
Y04AAS1]
Length = 272
Score = 41.7 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 21/280 (7%), Positives = 58/280 (20%), Gaps = 37/280 (13%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQS---SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
+ K L S L + + + Q+E+ + L + S
Sbjct: 1 MKKKKLFFAISGLAILLSSCAEPTQQGPNPITMLQQQYQYQQQEI-NEINRRLDSLDESL 59
Query: 76 A-------YEYFNQCSRDFPFAGVARKSLLMSAFV-----------------QYSAGKYQ 111
A +N +++ + + +
Sbjct: 60 AKLRVKLGLSTYNNITKNLGESESQTPPESSETPPSPSNLSSLPAITPSKGIKNLSSTVT 119
Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
S + + Y + + + + +
Sbjct: 120 IINSTAPSETQSSSSNLQALISNTPQSPQELYGMAYTAYQSGDYQKAKRLFKEFILKNPH 179
Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231
S A +++ + + + + + A A
Sbjct: 180 SKLTNNAYYWLGMAEKAMHHNNEALAILLSLIDKCKKGEL---------PSCDKAPSAYF 230
Query: 232 RLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
Y + A + + + YP A + ++
Sbjct: 231 SAANIYREMGQKSAAINLYKELIKLYPNSIEAALARSELE 270
>gi|172059752|ref|YP_001807404.1| tol-pal system protein YbgF [Burkholderia ambifaria MC40-6]
gi|171992269|gb|ACB63188.1| tol-pal system protein YbgF [Burkholderia ambifaria MC40-6]
Length = 249
Score = 41.7 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 19/111 (17%), Positives = 33/111 (29%)
Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
+ +Y + R + V + + + G + AA F+
Sbjct: 94 RQQKEYYQDLDTRLKKFEPQQATIDGVEGTVQPGETDALSAAQQQFRNGNFKAAAASFRS 153
Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
+A Y + + A L A AL + I +YPQ A
Sbjct: 154 FIAKYPQSPYQPTAQYWLGNAQYALRDYRGSTATWQAIVSKYPQHPRAADA 204
Score = 37.5 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 15/125 (12%), Positives = 40/125 (32%), Gaps = 14/125 (11%)
Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
+ K + +Y SPY A++++ G +Y
Sbjct: 136 QQQFRNGNFKAAAASFRSFIAKYPQSPYQPTAQYWL--------------GNAQYALRDY 181
Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
+ +Q +++ Y A +A+ + + A++ + +Y A+
Sbjct: 182 RGSTATWQAIVSKYPQHPRAADALVAIGTNQLEQGQKAAAKKTFEQVVSQYAGSNAAQTA 241
Query: 267 ETLVK 271
+ ++
Sbjct: 242 QGKIE 246
>gi|332878926|ref|ZP_08446641.1| putative tol-pal system protein YbgF [Capnocytophaga sp. oral taxon
329 str. F0087]
gi|332683277|gb|EGJ56159.1| putative tol-pal system protein YbgF [Capnocytophaga sp. oral taxon
329 str. F0087]
Length = 1000
Score = 41.7 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 30/213 (14%), Positives = 60/213 (28%), Gaps = 23/213 (10%)
Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
Y + Y A ++++++A F + + P + ++ Y
Sbjct: 495 DEYPKAFYGLAYANFNQRHYAEAIVNFEKYLKQNPKDEDFKHDAMLRLADSYFVTGKYW- 553
Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
+ G + + D A + + Y V+R N
Sbjct: 554 --------------------PAMEGYNKLIESKSADQDYAAYQKAISY--GFVDRPNNKI 591
Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
N E+G Y+ +G+ + +Q + +Y AM R
Sbjct: 592 EDLERFIKNYPTSNLRPNALYELGNTYVTQGDTDKGLQYYQQLAKDYKGNALVPRAMLRE 651
Query: 234 VEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
Y +A + I + YP+ A
Sbjct: 652 GLVYYNRGENQKALSLFKAIAKDYPKTTEASQA 684
Score = 35.9 bits (80), Expect = 5.6, Method: Composition-based stats.
Identities = 26/203 (12%), Positives = 56/203 (27%), Gaps = 5/203 (2%)
Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
R +EK +++ YF + + A+ L A+ K +
Sbjct: 136 EEKDRYYFEKGYALFNTGKQNESKPYFEAIQQHKEYGADAKYYLGYIAYDTNDYAKAESY 195
Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
+ + Y Y + I + + TK + +
Sbjct: 196 FRQVDTEDSVNNNVSYFQANMYFSQALYEEAIEEGEKQLKKTKNAQEVSELNKIIGESYF 255
Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS-----DAEHAEE 228
+K + + +N K Y G + + +A ++ + + A+
Sbjct: 256 NLKKYKEAIPYLQNYKGKKGKFSNTDYYYIGYALYKNNDYNGAIAQFNKIIDGNDQVAQN 315
Query: 229 AMARLVEAYVALALMDEAREVVS 251
A L E Y+ +A
Sbjct: 316 AYYHLAECYLKTGQKQQALNAFR 338
>gi|253699088|ref|YP_003020277.1| hypothetical protein GM21_0439 [Geobacter sp. M21]
gi|251773938|gb|ACT16519.1| Tetratricopeptide domain protein [Geobacter sp. M21]
Length = 1090
Score = 41.7 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 11/56 (19%), Positives = 26/56 (46%)
Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
AI +Q +L Y E ++ + ++ +Y L ++A V+ + +P+ +
Sbjct: 159 QEAIALYQKLLDKYPHYEGNDQVLYQMSRSYEELGQTEDAMAVMQRMVNDFPRSRY 214
Score = 38.6 bits (87), Expect = 0.82, Method: Composition-based stats.
Identities = 22/217 (10%), Positives = 59/217 (27%), Gaps = 14/217 (6%)
Query: 46 VYLDSVTDVRYQREVY-EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
Y + Y+ VY + +++ +S A +N PF + + + +
Sbjct: 324 EYFEKNGKRAYEDRVYGNLGEFYYEKRRYSDAAASYNAFVSRNPFHRASPQFQMRVIEIH 383
Query: 105 YSAGKYQQAASLGEEY---------ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
+ G +E+ ++ + V + + + +
Sbjct: 384 IAGGFPTLVIEAKKEFAKTYGLKAEYWKHFQPGERPEVIAFLKTNVTDLAHHYHALYQDP 443
Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
+ + + + A ++ ++ + A ++
Sbjct: 444 AHAKEREESF----QQALHWYEEFLVSFPKEAESPAINYQMADLLMENRSFAKAAQEYER 499
Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+Y E + A V AY +A E +
Sbjct: 500 TAYDYPRYEKSSAAGYAAVFAYREQLKNAQAEEKEKV 536
>gi|332298588|ref|YP_004440510.1| Tetratricopeptide TPR_1 repeat-containing protein [Treponema
brennaborense DSM 12168]
gi|332181691|gb|AEE17379.1| Tetratricopeptide TPR_1 repeat-containing protein [Treponema
brennaborense DSM 12168]
Length = 987
Score = 41.7 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 21/207 (10%), Positives = 51/207 (24%), Gaps = 6/207 (2%)
Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
Y + + A E F + P +A L +++ +
Sbjct: 107 QPDQTEIYYNLGFTYKLMGMYQDALECFKVVIEENPNDILAYNHLGSLYSLRHDSANAIA 166
Query: 113 AASLGEEYITQYPESKNV---DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
+ G + +P ++ + L + +
Sbjct: 167 SYRRGLKLDPNHPVLHLNLAKEFEILGKDEEAKLEYESALKAKPGWADALNGYASFLMAR 226
Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
+ A V + + G Y A +++ L+ E A
Sbjct: 227 NKKHEAFDLLAQGLALQPDDPAMLVSMADLQTQSGNYAEAFKQYRSALSRNP---ADENA 283
Query: 230 MARLVEAYVALALMDEAREVVSLIQER 256
+ L Y E+ ++ +++
Sbjct: 284 LLGLATVYEKEGKFPESVQIFDKLEKD 310
>gi|241206182|ref|YP_002977278.1| tol-pal system protein YbgF [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240860072|gb|ACS57739.1| tol-pal system protein YbgF [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 328
Score = 41.7 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 32/79 (40%), Gaps = 2/79 (2%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ + ++ G+Y A F + +Y + A +A L EA + +EA +
Sbjct: 207 QYKAAYGHVLSGDYSTAEQEFTQYITHYPSSARAADANFWLGEALYSQGKYNEAAKTFLN 266
Query: 253 IQERYPQGYWARYVETLVK 271
++Y + E L+K
Sbjct: 267 AHQKYGTSE--KAPEMLLK 283
Score = 37.9 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 30/78 (38%)
Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
+ A +G +G+Y A F Y +E A E + +L + AL
Sbjct: 233 HYPSSARAADANFWLGEALYSQGKYNEAAKTFLNAHQKYGTSEKAPEMLLKLGMSLAALD 292
Query: 242 LMDEAREVVSLIQERYPQ 259
+ A + + +RYP+
Sbjct: 293 NTETACATLREVSKRYPK 310
>gi|195953342|ref|YP_002121632.1| Tetratricopeptide TPR_2 repeat protein [Hydrogenobaculum sp.
Y04AAS1]
gi|195932954|gb|ACG57654.1| Tetratricopeptide TPR_2 repeat protein [Hydrogenobaculum sp.
Y04AAS1]
Length = 890
Score = 41.7 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 28/228 (12%), Positives = 55/228 (24%), Gaps = 22/228 (9%)
Query: 61 YEKAVLFLKE-QNFSKA------YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
Y A L + +++ A + + + Y K+ A
Sbjct: 374 YNYAKLLFLKIKDYKDAVYACVKAKDYKDAINILQMMPNHDEFYYKWLAESYYYTKHLIA 433
Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI----VERY 169
++ +Y + + Y + Y + V R
Sbjct: 434 LRNLLRSEGFKRYTELHNYYEGWYYFKLGDYQKALTYFTSRYYRAIVYFNMGDYKDVIRL 493
Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE----- 224
+P R + + E + +Y DA
Sbjct: 494 LENPSTYDERILLAKAYLSIDEPAKAREVLKPTTAEAKYLYGLSYFIQDDYQDAIRYFKE 553
Query: 225 ------HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
A+ +L +AY L +++A + E YP A
Sbjct: 554 IVSSKRFGARALLKLGDAYYNLGDINKAIYYYQKVVENYPNSKEAMEA 601
>gi|149375119|ref|ZP_01892891.1| hypothetical protein MDG893_05859 [Marinobacter algicola DG893]
gi|149360483|gb|EDM48935.1| hypothetical protein MDG893_05859 [Marinobacter algicola DG893]
Length = 253
Score = 41.7 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 29/78 (37%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+G YL + A F +V Y D A +A+ +L L ++AR +
Sbjct: 171 YYWLGEVYLVEEQLEQARQAFTIVATRYGDHRKAPDAVYKLGVTLDRLGDKEQARGRMQT 230
Query: 253 IQERYPQGYWARYVETLV 270
+ YP A + +
Sbjct: 231 VVRDYPNTSAAELAQKYL 248
>gi|73671072|ref|YP_307087.1| TPR domain-containing protein [Methanosarcina barkeri str. Fusaro]
gi|72398234|gb|AAZ72507.1| TPR-domain containing protein [Methanosarcina barkeri str. Fusaro]
Length = 1979
Score = 41.7 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 25/201 (12%), Positives = 59/201 (29%), Gaps = 6/201 (2%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE-- 119
++ ++ L F A + + + P + + + + + G
Sbjct: 452 QQGLILLDNGKFEPALKALEKVAELKPDNDACWMNKGYALYSMDRYEEALEDFEEGLRLN 511
Query: 120 -YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
Y+ + +K + + + + + I+ + A
Sbjct: 512 PYLEKGWNNKGIVLGKLGRTEEALEAFEKAVSLRPDFEDAWKNRGLILLAVDDYEKASEA 571
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
V + G LK G+ A+ F+ +L+ D + + L A
Sbjct: 572 FDEVLKTNPEDLDSIYNRGTALLKLGKTETALECFEKILSLNPDYP---DLLYSLAVAQA 628
Query: 239 ALALMDEAREVVSLIQERYPQ 259
L +EA E + + P+
Sbjct: 629 KLGKQEEALETFEKLAAKNPE 649
Score = 37.5 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 25/223 (11%), Positives = 58/223 (26%), Gaps = 15/223 (6%)
Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA--GVARKSLLMSAFVQYSAGKY 110
D + +E + + ++KA F + S + K+ + + +
Sbjct: 897 DPNNKEVKFELGIASFESGEYNKALSLFEEVSEGSDDSFVYCPEKNSYELNNSEQNVSEQ 956
Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR--IVER 168
+ E + + Q S I +
Sbjct: 957 GISEQNFSEQNNSEQNFSEQNNSEQNFSEQSISEQNNSNQKFSEQNNSKQKFSEQSISKE 1016
Query: 169 YTNSPYVK-------GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
+S Y K A ++L + +G + + + + ++
Sbjct: 1017 KYSSFYWKGLVLIRLEAYERALEVFSRLTENNPLFVEAWYLKGISHSKLKQHKEAAKDFE 1076
Query: 222 DAEHAEEAM----ARLVEAYVALALMDEAREVVSLIQERYPQG 260
+ A +L +Y L +EA V + P+
Sbjct: 1077 KVLELDPAYQDTCYQLGLSYFELGNFEEAIRVFESALKMDPEN 1119
Score = 36.7 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 25/220 (11%), Positives = 58/220 (26%), Gaps = 8/220 (3%)
Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
+ + Y + + F + NF +A F ++ F K +
Sbjct: 1253 QKKEDLYYYRGIAFFRLGNFEEAVRSFENALDLGCQQPEISYYTGIAYFENREYEKAVEI 1312
Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY------DQRATKLMLQYMSRIVE 167
+ + E + +++ V + K ++ E
Sbjct: 1313 FNAILDSGALDLEILYKKALALFELEKPEEVVSTVYTLLELETENFNIKDAGKFEEENYE 1372
Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
+ A E + ++ + + + ++
Sbjct: 1373 ESAGKESIGEENAGEIPAFENTKAFEELLEKFTFSLIQLGRYEEALLPLGKLTASESASK 1432
Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQGY--WARY 265
EA+ + L +EA E+ S ++ YP W R
Sbjct: 1433 EALYSKGIVFQELGRSEEALEIFSELRFLYPDFEKAWYRR 1472
Score = 36.3 bits (81), Expect = 4.5, Method: Composition-based stats.
Identities = 30/215 (13%), Positives = 58/215 (26%), Gaps = 2/215 (0%)
Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
Y + + K N+ +A E F P A S + G+ +
Sbjct: 143 AWYARGTVTGKTGNYEEALECFEHALEINPKNSDACYSKGLVLANLEKYGEALECFDSLI 202
Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
++ ++ Y + + + V R + + + + A
Sbjct: 203 REKPRHKDAWKQKYFSLIKLGKNEEALECVDAFLRKFPVSETALYQKGILLNELSRYEDA 262
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
T + + L + + + EA A +
Sbjct: 263 EKTFTKILKINPGNKEIWLKKGLALIQLLRLNDAIKAFEEAIKLDPTYFEAWNYKCLALM 322
Query: 239 ALALMDEAREVVSLIQERYPQGY--WARYVETLVK 271
L + +EA E + E YP+ W LVK
Sbjct: 323 KLEVYEEALEAFDSVLEIYPETKEIWYNRALALVK 357
>gi|257456245|ref|ZP_05621442.1| putative lipoprotein [Treponema vincentii ATCC 35580]
gi|257446331|gb|EEV21377.1| putative lipoprotein [Treponema vincentii ATCC 35580]
Length = 489
Score = 41.7 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 26/217 (11%), Positives = 56/217 (25%), Gaps = 6/217 (2%)
Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
D + +YE+ V F + ++ +A E F + + P A ++ + ++
Sbjct: 158 DPDNVQALYEEGVDFYNQGSYKEAGETFGKILKKHPDDIQALIWCGKVYYLDNKMTEAEE 217
Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
+Y + + A+ I D+ + + +
Sbjct: 218 CYRTALKYQPKNSLAIAELARIKSETNRMAEAITDIQKAIDLEPDAAPHWTDLGSYNLQI 277
Query: 173 PYVKG---ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
+ A + + G AI ++ V Y A E
Sbjct: 278 GRKEEALAAFNRAIELVPDSYFIHIYLAGLNDDLGNKEDAIKHYKKVTELYPQYYFAYEG 337
Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
+ L + AR P +
Sbjct: 338 LGIL---LFEKKDWESARRAFVNALRYAPANIYYALS 371
>gi|115350729|ref|YP_772568.1| hypothetical protein Bamb_0675 [Burkholderia ambifaria AMMD]
gi|115280717|gb|ABI86234.1| conserved hypothetical protein [Burkholderia ambifaria AMMD]
Length = 249
Score = 41.3 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 18/111 (16%), Positives = 33/111 (29%)
Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
+ +Y + R + V + + + G + AA F+
Sbjct: 94 RQQKEYYQDLDTRLKKFEPQQATIDGVEGTVQPGETDALNAAQQQFRNGNFKAAAASFRS 153
Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
+A Y + + A L A AL + + +YPQ A
Sbjct: 154 FIAKYPQSPYQPTAQYWLGNAQYALRDYRGSTATWQTVVSKYPQHPRAADA 204
Score = 38.6 bits (87), Expect = 0.91, Method: Composition-based stats.
Identities = 16/125 (12%), Positives = 40/125 (32%), Gaps = 14/125 (11%)
Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
+ K + +Y SPY A++++ G +Y
Sbjct: 136 QQQFRNGNFKAAAASFRSFIAKYPQSPYQPTAQYWL--------------GNAQYALRDY 181
Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
+ +Q V++ Y A +A+ + + A++ + +Y A+
Sbjct: 182 RGSTATWQTVVSKYPQHPRAADALVAIGTNQLEQGQKAAAKKTFEQVVSQYAGSNAAQTA 241
Query: 267 ETLVK 271
+ ++
Sbjct: 242 QGKIE 246
>gi|325105317|ref|YP_004274971.1| tetratricopeptide TPR_3 [Pedobacter saltans DSM 12145]
gi|324974165|gb|ADY53149.1| tetratricopeptide TPR_3 [Pedobacter saltans DSM 12145]
Length = 604
Score = 41.3 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 19/226 (8%), Positives = 67/226 (29%), Gaps = 3/226 (1%)
Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106
+ + E A + + N +A + Q + P + +++ +A + +
Sbjct: 374 NIPRLNPNELAEVKLELADVNILNNNPWEASLLYGQIEKSLPNTVLGQEAKFRNAKIAFY 433
Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
++ A + + + D + + + + + +
Sbjct: 434 NADFKWAKAQLDVLKASTSQLIANDALDLSLLIQEHFDEDSSNNALKTYAKAEFLREQHL 493
Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
S + + + + Y + +Y AI ++ + ++S++
Sbjct: 494 HEQALSKL--DSVLKAYPNTDLADDILLSKAKIYEAKRDYKQAISYYEKLCNDFSNSIWI 551
Query: 227 EEAMARLVEAYV-ALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
++A+ + Y + A + + +P + +
Sbjct: 552 DDAIYNIGIIYQDKIQNNQSASLYYEKLIKDHPGSIYTIDARKRFR 597
>gi|268317515|ref|YP_003291234.1| Tetratricopeptide TPR_4 [Rhodothermus marinus DSM 4252]
gi|262335049|gb|ACY48846.1| Tetratricopeptide TPR_4 [Rhodothermus marinus DSM 4252]
Length = 607
Score = 41.3 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 21/215 (9%), Positives = 58/215 (26%), Gaps = 3/215 (1%)
Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
+ +++ L L+ + S A F + +A + A + + G ++ A +
Sbjct: 388 QARFDQGRLALQAGDLSAARLAFLRLLDARRTGPLAEAARYQLALLDFYDGAFEAALAQL 447
Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
+ + D + + + + + R M++
Sbjct: 448 DILVEDAASDVANDALTLRLLIQENRGPDSLDTPLRRYAQARLLMAQNQPEAALDSLN-- 505
Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
+ R + G A+ Y + ++++
Sbjct: 506 VLQQDVGAHPIADDVTLLRARLLRRLGRPTEALALLLEFPLRYPRSPLRDQSLYEAARIQ 565
Query: 238 VA-LALMDEAREVVSLIQERYPQGYWARYVETLVK 271
L A + + + +P V T ++
Sbjct: 566 EEDLRDHAAALDTYTRLLTEFPGSPLIPEVRTRIR 600
>gi|88603844|ref|YP_504022.1| tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1]
gi|88189306|gb|ABD42303.1| Tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1]
Length = 643
Score = 41.3 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 20/199 (10%), Positives = 41/199 (20%)
Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
Y + + + A E F + P A K L+ A
Sbjct: 415 DAWYLLGDVAAVNKQYDVAKEAFETALQINPMKEDAFKYLVEVMRQLNQAYDTIHYYDRA 474
Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
P + + Y R + + + + G
Sbjct: 475 IAENPDIPIAWMRKGYAADLASEYGISEDAYAQVVRISPQSTEGWTNLGFARFQQGNYYG 534
Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
A + V + ++ +A+ + +
Sbjct: 535 AIDAFNESLKIDPNQSVYYVNRGAAYQKIDLLDNAYKDFSKALELNPDNRDALYGMGKTL 594
Query: 238 VALALMDEAREVVSLIQER 256
+ + EA I E
Sbjct: 595 YKMGKVQEAFPYFKKIGEN 613
>gi|308271858|emb|CBX28466.1| hypothetical protein N47_G37900 [uncultured Desulfobacterium sp.]
Length = 281
Score = 41.3 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 20/122 (16%), Positives = 45/122 (36%), Gaps = 14/122 (11%)
Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
YD Q + I+ +Y NS +F++ Q E I
Sbjct: 172 YDGEKYAAARQKLQEILSKYPNSDKADNCQFWIGESYYQEKWYEKAIV------------ 219
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
+Q V+ Y + ++ + ++ L ++ V++ + +++P A+ E+
Sbjct: 220 --EYQKVIEKYPKGNKMKASLLKQGLSFYNLGDKKNSKLVLNELIQKFPNSNEAKIAESK 277
Query: 270 VK 271
+K
Sbjct: 278 LK 279
>gi|304312646|ref|YP_003812244.1| hypothetical protein HDN1F_30200 [gamma proteobacterium HdN1]
gi|301798379|emb|CBL46603.1| Hypothetical protein HDN1F_30200 [gamma proteobacterium HdN1]
Length = 1047
Score = 41.3 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 9/54 (16%), Positives = 19/54 (35%)
Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
+ Y ++ +E R E Y + D+A + + P+G +
Sbjct: 197 LDTMAERYPNSPLMDEVQFRRGEQYFVMGNNDKALAAYKQVLKAGPEGKYYENA 250
>gi|255321139|ref|ZP_05362305.1| type IV pilus biogenesis/stability protein PilW [Acinetobacter
radioresistens SK82]
gi|255301693|gb|EET80944.1| type IV pilus biogenesis/stability protein PilW [Acinetobacter
radioresistens SK82]
Length = 267
Score = 41.3 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 27/254 (10%), Positives = 71/254 (27%), Gaps = 13/254 (5%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
YK + + +++ + + + + VR + A ++K + A
Sbjct: 6 YKTFVLLTVTLSALLVTACQTPDTLSKDPEKAVKVRT-----QLAAEYIKSGDLDAAKRA 60
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
+Q A + + + S +A S I+ P++ Y
Sbjct: 61 LDQALEVDSRDATANMMMGVLLQQEGSQLNLDKAESYFRRSISIEPKNAQARNNYGAYLY 120
Query: 140 SYAQMIRDVPY--------DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
+ + L+ + RI + N + +
Sbjct: 121 QIGRYKDAIEQLEIAGATLGYEQRYQALENLGRIYLKLGNVANAEKTFKQALQANRDSSI 180
Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
+E+ + R + AA ++ + A+ + A + +V+
Sbjct: 181 SMLELAEIFYLRQQIPAATQLYEQYVRRVGQKNQGARALWIGIRIARANDDKMGTQVLVN 240
Query: 252 LIQERYPQGYWARY 265
++ +P +
Sbjct: 241 QLRALFPDSQEYQR 254
>gi|94967621|ref|YP_589669.1| TPR repeat-containing protein [Candidatus Koribacter versatilis
Ellin345]
gi|94549671|gb|ABF39595.1| Tetratricopeptide repeat protein [Candidatus Koribacter versatilis
Ellin345]
Length = 294
Score = 41.3 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 19/116 (16%), Positives = 37/116 (31%), Gaps = 2/116 (1%)
Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
L+ + + + +FY A + I ++G + A+ +
Sbjct: 165 YNNALRDYNAGKYDLASGEFGDFMKFYADNDLAGNA--QFYIADIEYRQGNFDNAVKDYD 222
Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
VL Y A A + A + L D + + RYP+ A+ +
Sbjct: 223 KVLEQYPSGNKAPAAQLKKGFALLELGQKDAGVRELRSLINRYPRSIEAQQARDRL 278
>gi|332882355|ref|ZP_08449983.1| outer membrane assembly lipoprotein YfiO [Capnocytophaga sp. oral
taxon 329 str. F0087]
gi|332679739|gb|EGJ52708.1| outer membrane assembly lipoprotein YfiO [Capnocytophaga sp. oral
taxon 329 str. F0087]
Length = 289
Score = 41.3 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 44/283 (15%), Positives = 95/283 (33%), Gaps = 32/283 (11%)
Query: 11 IFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKE 70
F Y + + + ++ S A+ L + ++ D YE A + +
Sbjct: 5 NFAVQLYNMKR--IFLWLSGAMLLLASCNQYNNVMKTADYDYK-------YEAAKEYFVK 55
Query: 71 QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
+S++ + + L M A ++ G + A S ++Y YP+ V
Sbjct: 56 GQYSRSSVLLGELVTLMKGTSRGEECLYMLAMSEFCDGNFDVAHSYFKKYYQSYPKGVYV 115
Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
+Y + G S + + D DQ +T ++ ++ Y + + + ++++
Sbjct: 116 EYARFYAGRSLYESVPDTRLDQSSTMAAVKEFQDFLDYYPYTHLKDRTQEMIFALQDKMV 175
Query: 191 AKEV-----------EIGRYYLKRGEYVAAIPRFQLVLANYSDAE--HAEEAMARLVEAY 237
KE +G Y A I + L +Y A EE ++ A
Sbjct: 176 EKEFEAAKLYYDLGSYMGNCSYGGSNYEACIVTARNALLDYPYASPERREEFSIMILRAK 235
Query: 238 VALALMDEAREVVSLIQ----------ERYPQGYWARYVETLV 270
LA + + + YP+ + + + +
Sbjct: 236 YQLAQQSVEEKRLERYRDTIDEYYGFMNEYPESKYLKDAQRIF 278
>gi|332305582|ref|YP_004433433.1| type IV pilus biogenesis/stability protein PilW [Glaciecola
agarilytica 4H-3-7+YE-5]
gi|332172911|gb|AEE22165.1| type IV pilus biogenesis/stability protein PilW [Glaciecola
agarilytica 4H-3-7+YE-5]
Length = 329
Score = 41.3 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 19/241 (7%), Positives = 58/241 (24%), Gaps = 3/241 (1%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
F + + L Q+S +D + + + +L+ N+S+A
Sbjct: 1 MKFFRFFVVVLIFGLSACASQNS-GTAVDDFDKQKAAKTRLSLGLTYLENGNYSQAKFNL 59
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY--ITQYPESKNVDYVYYLVG 138
++ P + +A + ++
Sbjct: 60 DKALAFAPNLADVHYGMAYYYQNVEEPESASKAYQKAISLAPKNADIANSYGAFLCAQGD 119
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
A+ + + + + A ++ N + +
Sbjct: 120 YEQAKEYFFKALNSDVYNSSAETYENLALCSQSQNAFDDAIGFLKDALNHQPGRAKSLFL 179
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
+ + + A + +++ V+ A + +++ YP
Sbjct: 180 LAQVQLQANRFAAARDSLRRYEKVASVSAQSLWLAVKIEQGAGAPKRATDYANMLLSLYP 239
Query: 259 Q 259
Sbjct: 240 D 240
>gi|257468137|ref|ZP_05632233.1| hypothetical protein FulcA4_02297 [Fusobacterium ulcerans ATCC
49185]
Length = 470
Score = 41.3 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 31/78 (39%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+G+ L+ AI ++ L + E + AY L +E+R +
Sbjct: 389 YFYMGQSNLQLDNGQKAIENYKKALDLEKSDDKKAEIYYNMGIAYDKLGNKEESRNYFTF 448
Query: 253 IQERYPQGYWARYVETLV 270
++++YP+ W+ +
Sbjct: 449 VRQKYPKSSWSTKSSIYL 466
>gi|209550774|ref|YP_002282691.1| tol-pal system protein YbgF [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209536530|gb|ACI56465.1| tol-pal system protein YbgF [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 329
Score = 41.3 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 31/79 (39%), Gaps = 2/79 (2%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ + ++ G+Y A F + Y + A +A L EA + +EA +
Sbjct: 208 QYKSAYGHVLSGDYSTAEQEFTQYITRYPSSARAADANFWLGEALYSQGKYNEAAKTFLN 267
Query: 253 IQERYPQGYWARYVETLVK 271
++Y + E L+K
Sbjct: 268 AHQKYATSE--KAPEMLLK 284
Score = 37.9 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 17/76 (22%), Positives = 31/76 (40%)
Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243
+ A +G +G+Y A F Y+ +E A E + +L + AL
Sbjct: 236 PSSARAADANFWLGEALYSQGKYNEAAKTFLNAHQKYATSEKAPEMLLKLGMSLAALDNT 295
Query: 244 DEAREVVSLIQERYPQ 259
+ A + + +RYP+
Sbjct: 296 ETACATLREVSKRYPK 311
>gi|91787862|ref|YP_548814.1| hypothetical protein Bpro_1986 [Polaromonas sp. JS666]
gi|91697087|gb|ABE43916.1| Tetratricopeptide TPR_2 [Polaromonas sp. JS666]
Length = 253
Score = 41.3 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 29/77 (37%)
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+G Y A+ F+ ++ A EA+ + V L + AR+ + +
Sbjct: 173 FWLGNAQYALRNYRDAVANFRTLVTLEPGHMRAPEALLSMANCQVELKDVKSARKTLEDL 232
Query: 254 QERYPQGYWARYVETLV 270
+ YPQ A + +
Sbjct: 233 VKAYPQSEAASVAKERL 249
>gi|298245328|ref|ZP_06969134.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter
racemifer DSM 44963]
gi|297552809|gb|EFH86674.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter
racemifer DSM 44963]
Length = 591
Score = 41.3 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 21/211 (9%), Positives = 42/211 (19%), Gaps = 9/211 (4%)
Query: 47 YLDSVTDVRYQREVYE---KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL---MS 100
Y K + + KA + + + V S M
Sbjct: 375 QAYEEALGMDPLNFYAWNGKGTALYNQGYYRKALDAYLYATEIDSGNAVVWVSAGLVLMR 434
Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
A + + A + K + + + +
Sbjct: 435 LQRYQQALVHFERALSLDAQYVAAWNGKGDAQLDMNLPEEALASYQQALALDPRSFQAWN 494
Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220
+ + + A + A + G AA+
Sbjct: 495 GLGNVHSSLLDYTGAVDAYTRALTVNPRSAVAWCNKAEALSRLGHNRAALDALNEATEMD 554
Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVS 251
A E Y +L EA++
Sbjct: 555 KGYT---RAWLLKAEVYESLGNTQEAQKARK 582
>gi|172036671|ref|YP_001803172.1| hypothetical protein cce_1756 [Cyanothece sp. ATCC 51142]
gi|171698125|gb|ACB51106.1| hypothetical protein cce_1756 [Cyanothece sp. ATCC 51142]
Length = 309
Score = 41.3 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 37/242 (15%), Positives = 69/242 (28%), Gaps = 16/242 (6%)
Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
F A+ F +G+ SS ++ + + + +L EQN+ +A F
Sbjct: 11 FLKFFVLIAAILFCLGFSSPSSENLSNSPD---------FSQGIRYLNEQNYQEAILKFT 61
Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGK--YQQAASLGEEYITQYPESKNVDYVYYLVGM 139
Q D + S A++Q + + E N Y +
Sbjct: 62 QVINDKNQWIASAYSNRCLAYLQVNNNQAAKIDCEEALERNSENIEAYLNKGLADYRLEN 121
Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
++ +R Y ++ + Y Y + Y
Sbjct: 122 YTQSLVAYQEVIKRHKHDYRAYYNQGLVHYKLGNYQQALESYNQALETNHEDSLEHKTWI 181
Query: 200 YLKRGEYVAAIPRFQLVLANYSD----AEHAEEAMARLVEAYVALALMDEA-REVVSLIQ 254
Y R + F +AN++ +A + AY L A R+ +I
Sbjct: 182 YYDRALAYLKLENFSQAIANFTHVLILNPQDLQAYYQRGYAYQKLGNYQGAFRDFTEVIT 241
Query: 255 ER 256
Sbjct: 242 LN 243
>gi|171321508|ref|ZP_02910449.1| tol-pal system protein YbgF [Burkholderia ambifaria MEX-5]
gi|171093216|gb|EDT38423.1| tol-pal system protein YbgF [Burkholderia ambifaria MEX-5]
Length = 249
Score = 41.3 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 19/111 (17%), Positives = 32/111 (28%)
Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
+ +Y + R V + + + G + AA F+
Sbjct: 94 RQQKEYYQDLDTRLKKFEPQHATIDGVEGTVQPGETDALSAAQQQFRNGNFKAAAASFRG 153
Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
+A Y + + A L A AL + I +YPQ A
Sbjct: 154 FIAKYPQSPYQPTAQYWLGNAQYALRDYRGSTATWQAIVSKYPQHPRAADA 204
Score = 37.5 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 15/125 (12%), Positives = 40/125 (32%), Gaps = 14/125 (11%)
Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
+ K + +Y SPY A++++ G +Y
Sbjct: 136 QQQFRNGNFKAAAASFRGFIAKYPQSPYQPTAQYWL--------------GNAQYALRDY 181
Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
+ +Q +++ Y A +A+ + + A++ + +Y A+
Sbjct: 182 RGSTATWQAIVSKYPQHPRAADALVAIGTNQLEQGQKAAAKKTFEQVVSQYAGSNAAQTA 241
Query: 267 ETLVK 271
+ ++
Sbjct: 242 QGKIE 246
>gi|149638020|ref|XP_001512438.1| PREDICTED: hypothetical protein [Ornithorhynchus anatinus]
Length = 838
Score = 41.3 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 16/226 (7%), Positives = 44/226 (19%), Gaps = 10/226 (4%)
Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
++ +Y L+ ++ + +A + + + P +
Sbjct: 589 CSDIPDENLKDPHAHKSSVTSCLYNLGKLYHEQGRYEEALGVYKEAIQKMPRQFAPQSLY 648
Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL------VGMSYAQMIRDVPYD 151
M K +A E + + Y +
Sbjct: 649 NMMGEAYMRLNKLPEAEHWYVESLRSKTDHIPAHLTYGKLLALTGRKAEAERFFLKAIQL 708
Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
+ + + + + AA
Sbjct: 709 DPTKGNCYMHYGQFLLEEARLIEAAEMAKKAAELDSTEFDVVFNAAHMLRQASLNEAAEK 768
Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR-EVVSLIQER 256
+ + A+ L + EA + +Q +
Sbjct: 769 YYDQAARLRPNYPA---ALMNLGAILHLNGKLREAETNYLRALQLK 811
>gi|94501022|ref|ZP_01307546.1| hypothetical protein RED65_05184 [Oceanobacter sp. RED65]
gi|94426769|gb|EAT11753.1| hypothetical protein RED65_05184 [Oceanobacter sp. RED65]
Length = 246
Score = 41.3 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 13/69 (18%), Positives = 29/69 (42%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ + +K ++ AI F+ L + + A L + Y ++DEAR+ +
Sbjct: 128 QYDHAFALMKERKFDEAISEFKSFLEAHPKSSLAVNGYYWLGQVYYNKGMLDEARKAFAF 187
Query: 253 IQERYPQGY 261
+ ++P
Sbjct: 188 VVNQFPDHQ 196
>gi|78223819|ref|YP_385566.1| hypothetical protein Gmet_2622 [Geobacter metallireducens GS-15]
gi|78195074|gb|ABB32841.1| hypothetical protein Gmet_2622 [Geobacter metallireducens GS-15]
Length = 152
Score = 41.3 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 30/79 (37%), Gaps = 3/79 (3%)
Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA-YVALALMDEAREVVSLIQ 254
+G+ + + AA F+ ++++Y A EA+ A Y+ + + +
Sbjct: 73 MGKARFNQPDRQAACQCFRRIISDYPKNSLAPEAIYLNGVARYIETHDVANLIGIHDRLA 132
Query: 255 ERYPQGYWARYV--ETLVK 271
YP W L+K
Sbjct: 133 AEYPDSPWLTRADPYKLLK 151
>gi|301057303|ref|ZP_07198421.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2]
gi|300448533|gb|EFK12180.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2]
Length = 535
Score = 41.3 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 23/248 (9%), Positives = 68/248 (27%), Gaps = 15/248 (6%)
Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
+ TI FS + L+ + S+ + ++ Q V +A +++ +A + +
Sbjct: 3 YLKTIIFSFSFLLLL--QGVSAEIYLKEPISVTPEQYAVLSRAQEEMEKGRNRQALKILS 60
Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
S F++ + E + +
Sbjct: 61 DFSAGDTEKLHP-----HFLFLKGLIEYRLKNLKNAEMLFKKAVRQDPCFGEAWQNLSVV 115
Query: 142 AQMIRDVPYDQRATKLMLQ------YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
A + + + + + + + A + + A +
Sbjct: 116 YHRQEKPAMAADAMEKANRLMPDPKHQYQAACLWIEADRPEKALPLLETLCAKNTAPKKY 175
Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
+ + + + + + E+ RL Y+ ++A ++ +
Sbjct: 176 RSTLIHVLEKLGKTEKAAKRIAEKTPEEKSSAES-FRLALLYLNQGHPEKALPLLQELAG 234
Query: 256 RY-PQGYW 262
+ P+ W
Sbjct: 235 NHAPEPQW 242
>gi|170750722|ref|YP_001756982.1| tol-pal system protein YbgF [Methylobacterium radiotolerans JCM
2831]
gi|170657244|gb|ACB26299.1| tol-pal system protein YbgF [Methylobacterium radiotolerans JCM
2831]
Length = 329
Score = 41.3 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 35/79 (44%)
Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
N++A +G YL RG A +F V +Y+ + A +AM +L AL
Sbjct: 231 QSHPRDNRVAGATYWLGESYLARGRNREAAEQFLKVSTDYARSSQAPDAMLKLGVTLNAL 290
Query: 241 ALMDEAREVVSLIQERYPQ 259
++A ++ + ++P
Sbjct: 291 GAREQACATLAELDRKFPN 309
>gi|282900369|ref|ZP_06308319.1| Lytic transglycosylase, catalytic [Cylindrospermopsis raciborskii
CS-505]
gi|281194682|gb|EFA69629.1| Lytic transglycosylase, catalytic [Cylindrospermopsis raciborskii
CS-505]
Length = 724
Score = 41.3 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 22/222 (9%), Positives = 55/222 (24%), Gaps = 2/222 (0%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
+ + F KA + + + L + + + Y
Sbjct: 225 PQSSLTPADWEVIGAAYWDNNEFVKASNAYKSAPKTAKNLYRTARGLQIDKKREEATVIY 284
Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR--DVPYDQRATKLMLQYMSRIVER 168
+Q L + + + P + ++
Sbjct: 285 KQQVKLFPKEKETGIALLRLAEMSSGKDAIPYLDQIIAQFPSQAPQALAQKAKLLTSLKD 344
Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
++ + + K +Y+ A Q + ++ A
Sbjct: 345 NQSANQTWKLLLSKYSSSDAATEYRWQNALAKAKNRDYIGAWEWAQPIPTQNPESILAPR 404
Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
A + + L +EAR+ + +PQ Y+A ++
Sbjct: 405 ASFWVGKWASLLGKNEEARKSYEYVLANFPQSYYAWRSARIL 446
>gi|163753728|ref|ZP_02160851.1| hypothetical protein KAOT1_18937 [Kordia algicida OT-1]
gi|161325942|gb|EDP97268.1| hypothetical protein KAOT1_18937 [Kordia algicida OT-1]
Length = 603
Score = 41.3 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 26/226 (11%), Positives = 75/226 (33%), Gaps = 3/226 (1%)
Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
++ +T + + + ++ F++A YF+Q + +++ A
Sbjct: 369 KETLQQKLTLRQQAAVKLALGDILVYQEQFNQALIYFSQVQKALKNDITGQEARFRVART 428
Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
Y G ++ A + + + + D + + +S + + +
Sbjct: 429 SYYKGDFEWAETQLKVLKSSVSQLIANDALQLKLIISDNSLEDSTQTALKKYAKA--DLL 486
Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
+ ++ T + G + + Y KRGEY A ++ ++ + D
Sbjct: 487 KYQKKETEAIATLEDILQNHKGEKIEDEALLMQAKLYEKRGEYDKARLNYKKIIEFFKDD 546
Query: 224 EHAEEAMARLVEAYVAL-ALMDEAREVVSLIQERYPQGYWARYVET 268
++A + + Y+ ++A++ I + +
Sbjct: 547 ILVDDAYFAMAQLYLHQFDDPEKAKDFFEEIIFNHQDSIHYVEAQK 592
>gi|54308838|ref|YP_129858.1| hypothetical protein PBPRA1645 [Photobacterium profundum SS9]
gi|46913268|emb|CAG20056.1| hypothetical protein PBPRA1645 [Photobacterium profundum SS9]
Length = 207
Score = 41.3 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 17/212 (8%), Positives = 49/212 (23%), Gaps = 7/212 (3%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
++K I I+ FL G + + ++ + Q + ++ L ++ + + +
Sbjct: 1 MFKRIFLISVGISALFLSGCATVLTAEETAPNIRTISTQDSM---SLAVLDKRKYVVSED 57
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+ S + + + + + + +
Sbjct: 58 KAADFEGIIRSGLGIPYTYGTPTKEAMSVYLSNRLSVGFDNHGIKLTVVETEPKMSVNSV 117
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
+ + + NS Y +G +L
Sbjct: 118 VDNLVKNDLTSILIVLNE----WKYDFHTFSDNSWYDMDVIVIDGLGNKKLVKNFKGEND 173
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
++ N EA+
Sbjct: 174 VPDGGLISNEMQLIYKQRFENTFSDPEVVEAL 205
>gi|163848502|ref|YP_001636546.1| protein kinase [Chloroflexus aurantiacus J-10-fl]
gi|222526436|ref|YP_002570907.1| TPR repeat-containing serine/threonine protein kinase [Chloroflexus
sp. Y-400-fl]
gi|163669791|gb|ABY36157.1| protein kinase [Chloroflexus aurantiacus J-10-fl]
gi|222450315|gb|ACM54581.1| serine/threonine protein kinase with TPR repeats [Chloroflexus sp.
Y-400-fl]
Length = 884
Score = 41.3 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 27/223 (12%), Positives = 60/223 (26%), Gaps = 25/223 (11%)
Query: 39 ERQSSRDVYLDSVTDVRYQR--EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
+ + + D+ + L + + +A +YF Q P++ VA
Sbjct: 672 SQTDEAEKAFNQALDLNDDESFALLGLGRLAFDDNDMQQAIDYFKQVIDANPYSAVAHAF 731
Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
L AG ++ E Q + + + Q
Sbjct: 732 L---GEASLFAGYDATDENVQRELYQQAETAYRAAIARDDYFGFAYNGLGWILQYQDRYA 788
Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
++ + ++ +P + + ++ Y A F+
Sbjct: 789 ESIEAFEKALQLDNENPEIFNGLGWSLFLSDR-----------------YPEAESMFKRA 831
Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
+ D+ + A L Y DEA +++ P
Sbjct: 832 IEL--DSSYTS-AYFGLGRTYEEQGRWDEALATFQTLKQIAPD 871
>gi|121998998|ref|YP_001003785.1| hypothetical protein Hhal_2219 [Halorhodospira halophila SL1]
gi|121590403|gb|ABM62983.1| Tetratricopeptide domain protein [Halorhodospira halophila SL1]
Length = 252
Score = 41.3 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 18/128 (14%), Positives = 39/128 (30%), Gaps = 14/128 (10%)
Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
+ + +++ + Y A I Y
Sbjct: 127 YQAAFRQLGDGLYEEAREGFRDVLDTDADGDY--------------AANAVYWIAETYYA 172
Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
E+ A F V+ +Y ++ +A +L ++EAR+ + +QE +P
Sbjct: 173 EREFEDAEAYFNRVVDDYEESNKVADAQLKLGYIAFEEDRLEEARDRLEAVQEDHPDTTA 232
Query: 263 ARYVETLV 270
A + +
Sbjct: 233 ANLAQQRL 240
>gi|253567497|ref|ZP_04844939.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
gi|251943706|gb|EES84268.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
gi|301161683|emb|CBW21223.1| putative membrane protein [Bacteroides fragilis 638R]
Length = 504
Score = 41.3 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 27/265 (10%), Positives = 49/265 (18%), Gaps = 18/265 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK--- 75
+ K +I A+ L D + Y A+ + +
Sbjct: 6 MKKIYKSITLVAAILSLSSCGNDWLDRKPADGIPSED-AITNYNDALTA-RTGMYDGIQG 63
Query: 76 ---AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132
A Y+ + S +
Sbjct: 64 NSNATSYYGARMFYYGDVRADDMQARTQGMRSSSCYEMLYTVDDAPNMWNIPYNVIRRAN 123
Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI---VERYTNSPYVKGARFYVTVGRNQL 189
+ L + + + R PY + V
Sbjct: 124 RLIEAINEKKVTDATEAQIGKIYSEALVVRALVHFDLVRIYGMPYTADNGASLGVPVIVK 183
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQL-------VLANYSDAEHAEEAMARLVEAYVALAL 242
+ ++ Y I + A A L Y+
Sbjct: 184 PLERNDLPSRNTVAEVYTQVITDLTDAINSGYLAKDQTPGYINEWAAKALLTRVYLTKGD 243
Query: 243 MDEAREVVSLIQERYPQGYWARYVE 267
+ A +V I P WA
Sbjct: 244 NENALKVAEDIITNSPYKLWANEEY 268
>gi|303279024|ref|XP_003058805.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459965|gb|EEH57260.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 669
Score = 41.3 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 21/194 (10%), Positives = 53/194 (27%), Gaps = 6/194 (3%)
Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
+Y + ++K + A F + P L + + + +
Sbjct: 444 EAIYNLGLAYIKLGAYEDALAAFRKVHAMTPDNAEVLYQLGNVSDMLGDFPAAIKHLEIL 503
Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT---KLMLQYMSRIVERYTNSPY 174
++ P + A+ + R +L+++ + N
Sbjct: 504 HAKVSTDPGILARLGAIHAAIGDEAKALHYYQESHRLYPSDMDVLRWLGTFYVKTGNWEK 563
Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234
+ + + + + + K G A+ ++ + Y D E + L
Sbjct: 564 ARELYQLACMIKPKDVKYRLLVATCLRKVGNVNDALAAYETIHKVYPD---NVECLRHLC 620
Query: 235 EAYVALALMDEARE 248
Y L + E
Sbjct: 621 RLYGDLGRTKDVDE 634
>gi|299067717|emb|CBJ38926.1| putative associated to Tol-Pal complex protein (ygcF) [Ralstonia
solanacearum CMR15]
Length = 257
Score = 41.3 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 17/126 (13%), Positives = 39/126 (30%), Gaps = 2/126 (1%)
Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
P +Q L+ + + + + Y LA + +G + +
Sbjct: 131 MVQPGEQTEYDAALKTFQSGDFKGAGNQFSAFVKKYPQSPYLPLA--QFWLGNALYAQRD 188
Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
Y + + + A EA+ ++ AR+ + + YP A+
Sbjct: 189 YKGSTYVLENMARANPQHPKAPEALLQVATNQGESGQKAAARKTLESVIAEYPGTEQAKT 248
Query: 266 VETLVK 271
+ +K
Sbjct: 249 ATSRLK 254
>gi|188997451|ref|YP_001931702.1| Tetratricopeptide TPR_2 repeat protein [Sulfurihydrogenibium sp.
YO3AOP1]
gi|188932518|gb|ACD67148.1| Tetratricopeptide TPR_2 repeat protein [Sulfurihydrogenibium sp.
YO3AOP1]
Length = 297
Score = 41.3 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 27/241 (11%), Positives = 57/241 (23%), Gaps = 15/241 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K + +I + + S D +YE + +L N + A +
Sbjct: 1 MKKNFFALTLAILISSCANPQSYESDLRVGDGKY-------LYEMGISYLNSGNNAMAIK 53
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV----DYVY 134
Y + + + V L F ++Y N
Sbjct: 54 YLEEALKSYDKPEVYNALALAYQFAGEFTKAEAIFRLGIDKYPDYPELLTNYGILLASQK 113
Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
+ + + + + + +
Sbjct: 114 KFNEAIKYFEKAINNPTYSGKEKAYYNLGMVYLQLGKEDLFLSNLEKALMFNSNFVNAYI 173
Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDA----EHAEEAMARLVEAYVALALMDEAREVV 250
+G YYL + + YS A + RL + Y L + A+ +
Sbjct: 174 TLGDYYLDKYNAAHNKEMLKKTREYYSKALNYVANDPSIYFRLGKVYHELGDDELAKYYL 233
Query: 251 S 251
Sbjct: 234 E 234
>gi|149178927|ref|ZP_01857505.1| hypothetical protein PM8797T_06757 [Planctomyces maris DSM 8797]
gi|148842266|gb|EDL56651.1| hypothetical protein PM8797T_06757 [Planctomyces maris DSM 8797]
Length = 491
Score = 41.3 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 24/198 (12%), Positives = 55/198 (27%), Gaps = 18/198 (9%)
Query: 65 VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY 124
+L EQ + A + Q S ++ + + +Y +
Sbjct: 56 RDYLSEQQWEDAVKILIQISDEYGDSLYPESAGRYLRVSEYCQNLLAGFPPEAIAIYREK 115
Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184
+ + + Y++ Q + I E+ S Y A +
Sbjct: 116 VDPRAKRW-----------------YEEALANSSEQPLVNIAEQALMSSYGDDALNLLGE 158
Query: 185 GRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH-AEEAMARLVEAYVALALM 243
+ + + P + L +Y D + E +ARL+
Sbjct: 159 LAWEQGQLAEARSCWRKLIPRTASDSPVYDAGLFHYPDTDLPVPEILARLILVSFFEGNF 218
Query: 244 DEAREVVSLIQERYPQGY 261
+A ++++P+
Sbjct: 219 SQADFEYRQFRKKFPETD 236
>gi|307174515|gb|EFN64974.1| Intraflagellar transport protein 88-like protein [Camponotus
floridanus]
Length = 779
Score = 41.3 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 26/225 (11%), Positives = 55/225 (24%), Gaps = 15/225 (6%)
Query: 35 LVGWERQSSRDVYLDS------VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
L + TD + + +Y +++ K+ + +A E F +
Sbjct: 458 LSACAIKKDELNIARELLLCALETDASHVQALYNLGLVYKKQTMYEEALECFWKIRNIVR 517
Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
+ + + I + Q
Sbjct: 518 HDPQT-LYQIGHLYQLMNDVDQASEWYNQLLGILSSDPGVLQKLGELYDSIGDKQQAFQF 576
Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI----GRYYLKRG 204
D + + Y S V +LA E + G
Sbjct: 577 YNDSHRFYPANFEVIDWIGSYFISMQVAEKALTYFEKAVELAPDEPRWRLLVAACLRRTG 636
Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
++ A+ +Q + + D E + L+ + L EA+
Sbjct: 637 QFHKALMEYQDIHNKFPDNI---ECLKFLIRLCSDMGLK-EAQMY 677
>gi|218438974|ref|YP_002377303.1| hypothetical protein PCC7424_2005 [Cyanothece sp. PCC 7424]
gi|218171702|gb|ACK70435.1| TPR repeat-containing protein [Cyanothece sp. PCC 7424]
Length = 512
Score = 41.3 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 28/220 (12%), Positives = 56/220 (25%), Gaps = 6/220 (2%)
Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106
+ S+ + ++ E+ + + +A E +N+ A L S
Sbjct: 250 IVTSMAKTQQADKLVEEGKQLRNQGQYEEAIESYNKALEFKSDYHEAWYGLGYSLNELER 309
Query: 107 AGKYQQAASLGEEYITQYPESKN---VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
K ++ + E+ + Y E+ + + +
Sbjct: 310 YQKAIESYNKALEFKSDYHEAWYGLGYSLNELERYQEAIESYNKALEFKSDYHEAWYGLG 369
Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
+ + ++ +G K Y AI + L SD
Sbjct: 370 YSLNELERYQEAIESYNKALEFKSDYHEAWYGLGYSLNKLERYQEAIKSYDKALEFKSDY 429
Query: 224 EHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
EA + L DEA + E P
Sbjct: 430 ---HEAWYGRGVSLRRLERYDEAIQSYDKALEIDPNNPLY 466
>gi|313905735|ref|ZP_07839095.1| TPR repeat-containing protein [Eubacterium cellulosolvens 6]
gi|313469442|gb|EFR64784.1| TPR repeat-containing protein [Eubacterium cellulosolvens 6]
Length = 438
Score = 41.3 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 26/202 (12%), Positives = 55/202 (27%), Gaps = 10/202 (4%)
Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
+ + Y + + L+++++S A E F A R + ++ + A
Sbjct: 36 ESDAYYQGMQALEKKDYSGALEKFQSAVDGGRDAEGYRGIGIADMYLGKYEEASEAFAKS 95
Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
+ ++ V + +Y ++ + +L+ Y
Sbjct: 96 LNDVRYPKLNKDFIEDVLFYQAQAYLELEKYDDAATIYNQLLDGKHQGQAYLLRGKIYAI 155
Query: 177 GARFYVTVGRNQLA-------AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
+F Q A +EI Y+K Q E
Sbjct: 156 QNKFGQAGQDFQKAVSLNPSYEFYLEIYEIYVKNNRQADGAVFLQEAQEIKPSTG---ED 212
Query: 230 MARLVEAYVALALMDEAREVVS 251
+L L D+A +
Sbjct: 213 NFQLGRISYELKEYDKAEGYLR 234
>gi|268316401|ref|YP_003290120.1| Tetratricopeptide TPR_4 [Rhodothermus marinus DSM 4252]
gi|262333935|gb|ACY47732.1| Tetratricopeptide TPR_4 [Rhodothermus marinus DSM 4252]
Length = 929
Score = 41.3 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 23/232 (9%), Positives = 53/232 (22%), Gaps = 14/232 (6%)
Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
+ S +V + + N++ A + F + + + L
Sbjct: 71 AIEKSAEVVRRYPGSKWADDALMLIGQSYFYLGNYAGAAQKFREVIALGGAKELEARFWL 130
Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY---------VYYLVGMSYAQMIRDVP 149
+ V + Q P + + + +
Sbjct: 131 ARSLVAARSFDEAQTVLQETLAREALPTDWRSRFLLLQADLYVQQERWEEARQALEAGLQ 190
Query: 150 YDQRATKLMLQYMS-----RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204
+ Y ++ Y + A E + R
Sbjct: 191 RVPERSLGAKGYFLLGQLCETLQDYACAYAAFDRVRRYRPDYELAYAAEWQAVRIQGLYL 250
Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
AA+ R + + + E Y A+ ++EAR + +
Sbjct: 251 NPEAALERLRRMERDDKHFARRAELTYLRARIYQAMGAVEEARALYHQLLYE 302
Score = 35.5 bits (79), Expect = 7.1, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 29/85 (34%)
Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
+ + + + +L +A ++LV+ +D A A L E
Sbjct: 531 DSVRQAQMRAERARLRYELGNVLFLSMQRPDSAAYWYRLVILEDADQPVAPRAYYALAEV 590
Query: 237 YVALALMDEAREVVSLIQERYPQGY 261
AL A ++ + ERYP
Sbjct: 591 QRALGDTAAASALLKTLLERYPDTP 615
>gi|332885276|gb|EGK05527.1| hypothetical protein HMPREF9456_02728 [Dysgonomonas mossii DSM
22836]
Length = 284
Score = 41.3 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 36/238 (15%), Positives = 77/238 (32%), Gaps = 16/238 (6%)
Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106
+ + R YE A + ++ + + ++ + + ++ L + A +
Sbjct: 20 EYNKILKSRDAELKYEYAKKYFDQKKYGRTITLLDEILSAYTGSSKEQEILYLLAQSYFY 79
Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
Y A Y ++P+ + + + D DQ +T +Q +
Sbjct: 80 DKDYTTATQYYTRYYNKFPKGEFTELARFNSAYGLYLDSPDARLDQTSTYKGIQEFQNFL 139
Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKE------VEIGRYYLKRGEYVAAIPRFQLVLANY 220
E + S A+ + + +LA KE Y + Y + + + L +Y
Sbjct: 140 EYFPQSEKAPEAQDLMFKLQEKLAYKEFLAARLYYNLGLYNRENYYESCVVTAREALKSY 199
Query: 221 SDAEHAEEAMARLVEAYVALA----------LMDEAREVVSLIQERYPQGYWARYVET 268
+E EE +V A A E + + +P G + + E
Sbjct: 200 PFSEFTEEFQILIVRARFEQAVYSVEEKKPVRYRELMDEHFNYKNMFPNGKYTKESER 257
>gi|296127379|ref|YP_003634631.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563]
gi|296019195|gb|ADG72432.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563]
Length = 346
Score = 41.3 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 16/122 (13%), Positives = 39/122 (31%), Gaps = 10/122 (8%)
Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
++ + ++ S Y + +A K G Y
Sbjct: 185 YFNMNEYDRAFETYEDFLKYNKTSIYYDEVVRTYLIQVPAMAHKTFVEGNYV-------K 237
Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
+ + + + E+AEEA+ R+ ++Y + A + + ++ + E
Sbjct: 238 SRMYYTKIAELFPRTEYAEEALFRIAQSYYNEKNYNRAIDYYNRVRLN---NVYTLDAEA 294
Query: 269 LV 270
L+
Sbjct: 295 LL 296
>gi|17986624|ref|NP_539258.1| TPR repeat-containing protein [Brucella melitensis bv. 1 str. 16M]
gi|17982238|gb|AAL51522.1| tpr repeat containing exported protein [Brucella melitensis bv. 1
str. 16M]
Length = 194
Score = 41.3 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 27/78 (34%), Gaps = 2/78 (2%)
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+ YL G+Y AA F+ + Y EA L E+ EA +
Sbjct: 74 YQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYPEAATLFIDT 133
Query: 254 QERYPQGYWARYVETLVK 271
Q YP R E + K
Sbjct: 134 QRDYPDSK--RAPENMFK 149
Score = 40.2 bits (91), Expect = 0.32, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 42/126 (33%), Gaps = 7/126 (5%)
Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
+ QY+ + + + + + Y A +G +G
Sbjct: 65 PTDDNPNSLYQAAYQYLMSGDYKAAEAGFREHVKRYPA--DPMTAEARFWLGESLYGQGR 122
Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
Y A F +Y D++ A E M +L A + D A + I +RYP +
Sbjct: 123 YPEAATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNHDVACATFAQIPQRYP-----KA 177
Query: 266 VETLVK 271
++K
Sbjct: 178 APAILK 183
Score = 38.6 bits (87), Expect = 0.94, Method: Composition-based stats.
Identities = 21/118 (17%), Positives = 44/118 (37%), Gaps = 8/118 (6%)
Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
+Y+ A +L ++ A F + + +P + ++ Y G+Y +A
Sbjct: 67 DDNPNSLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYPEA 126
Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
A+L + YP+SK + +GM+ + ++I +RY
Sbjct: 127 ATLFIDTQRDYPDSKRAPENMFKLGMA--------LEKMDNHDVACATFAQIPQRYPK 176
>gi|302338865|ref|YP_003804071.1| hypothetical protein Spirs_2362 [Spirochaeta smaragdinae DSM 11293]
gi|301636050|gb|ADK81477.1| Tetratricopeptide TPR_2 repeat protein [Spirochaeta smaragdinae DSM
11293]
Length = 647
Score = 41.3 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 26/221 (11%), Positives = 66/221 (29%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
D Y A++ L+ + A+E + + + V +L +++ ++
Sbjct: 427 AADSEDPVARYNIALVQLQLGKDNDAFENAAKAVQLDSSSAVYLYTLGLTSEAVGNSDGA 486
Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
A Y K Y Y + + + L+ + + Y
Sbjct: 487 VSAYRASIAKDRGYLPPKINLGKLYDDQGKYDEALDQLLAAYAIDPKSLEVNNNLGNVYL 546
Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
+ + + + + + L E + +A
Sbjct: 547 HKELYQDSIKHYKAAIEKKPNATLMRYNLSLAYIETGDQDDAIASLQELIKVDPSYWDAY 606
Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+L + A D A+ +++ + E+ P + +E L++
Sbjct: 607 YQLGKLLFAKGQNDSAKNILNKLLEKQPDYPKRQEIEELIR 647
Score = 39.0 bits (88), Expect = 0.68, Method: Composition-based stats.
Identities = 20/217 (9%), Positives = 56/217 (25%), Gaps = 5/217 (2%)
Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
+ + + + ++++ A +F++ P + A + + F + ++
Sbjct: 191 KNLVRQGEEAMDQKDYIGARGFFSEALDIDPSSAPALANTGETFFREDENSDSNIKKAVD 250
Query: 118 EEYITQYPESK-NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY-- 174
+ V Y S + + + + + ++ + Y
Sbjct: 251 YANRAIQSDPNLWVPYNTLGKVYSKQRQWNNAIDSYKQAARLNPENADLLFELGKAQYRA 310
Query: 175 --VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232
AR + E + + + ++ A +
Sbjct: 311 GKYDDARQSFEAAIHIDPQHEKAYLNLGVTQRRLGNVNAAINAFGKAAQINKESDVAFYQ 370
Query: 233 LVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
L E Y M +A E P + +
Sbjct: 371 LGELYKQKGDMKQASENYQKAAALQPDRNIYQGSYAV 407
>gi|56751970|ref|YP_172671.1| soluble lytic transglycosylase [Synechococcus elongatus PCC 6301]
gi|56686929|dbj|BAD80151.1| probable soluble lytic transglycosylase [Synechococcus elongatus
PCC 6301]
Length = 690
Score = 41.3 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 16/136 (11%), Positives = 39/136 (28%), Gaps = 7/136 (5%)
Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
A +R +++ +I + + + N A
Sbjct: 162 PATIQRWPRYPASNELARQLAKRQPAEAKRWLLQIAQFGRYRFDIDAVLSELQALPNLTA 221
Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
+I Y +R + + Y+ + +E + R + + + AR +
Sbjct: 222 RDRQQIADAYWQRDD-------YATAADLYARSPQTDETLYRQARSLDLTSQPEVARTLY 274
Query: 251 SLIQERYPQGYWARYV 266
+ +R+PQ
Sbjct: 275 QQLLQRFPQSPERERA 290
>gi|260768864|ref|ZP_05877798.1| TPR repeat-containing protein [Vibrio furnissii CIP 102972]
gi|260616894|gb|EEX42079.1| TPR repeat-containing protein [Vibrio furnissii CIP 102972]
gi|315180557|gb|ADT87471.1| hypothetical protein vfu_A02340 [Vibrio furnissii NCTC 11218]
Length = 260
Score = 41.3 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 12/93 (12%), Positives = 30/93 (32%)
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
+F + A+ + + + Y D+ +AM +L +
Sbjct: 168 QFQKDYPNSNFASNSHYWLGQLYFAKKQDPEAVKSFAAVLAYKDSNKRADAMVKLGDIAK 227
Query: 239 ALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+A++ + + YP A+ + +K
Sbjct: 228 RNNNAAQAKKYYQQVVDEYPDSASAKVAKENLK 260
>gi|110598525|ref|ZP_01386794.1| conserved hypothetical protein [Chlorobium ferrooxidans DSM 13031]
gi|110339829|gb|EAT58335.1| conserved hypothetical protein [Chlorobium ferrooxidans DSM 13031]
Length = 261
Score = 41.3 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 30/78 (38%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ + Y + AI +Q+V+A Y+ + A+ + + + A+ S
Sbjct: 183 QFYLAESYFLEKWFEKAILEYQVVIAKYTKSSKRPAALFKQAICFEKIGDTASAKARYSS 242
Query: 253 IQERYPQGYWARYVETLV 270
+ YP A+ + +
Sbjct: 243 LVSVYPASPEAKLAKKKL 260
>gi|51597159|ref|YP_071350.1| fimbrial biogenesis protein [Yersinia pseudotuberculosis IP 32953]
gi|153948563|ref|YP_001400165.1| type IV pilus biogenesis/stability protein PilW [Yersinia
pseudotuberculosis IP 31758]
gi|186896254|ref|YP_001873366.1| type IV pilus biogenesis/stability protein PilW [Yersinia
pseudotuberculosis PB1/+]
gi|51590441|emb|CAH22081.1| putative fimbrial biogenesis protein [Yersinia pseudotuberculosis
IP 32953]
gi|152960058|gb|ABS47519.1| type IV pilus biogenesis/stability protein PilW [Yersinia
pseudotuberculosis IP 31758]
gi|186699280|gb|ACC89909.1| type IV pilus biogenesis/stability protein PilW [Yersinia
pseudotuberculosis PB1/+]
Length = 249
Score = 41.3 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 26/252 (10%), Positives = 62/252 (24%), Gaps = 17/252 (6%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
K + V L G + R + + +L + + + A +
Sbjct: 1 MKLTKLWRVCLVVSVLTGCSGTPPENTSQAVAGQTRL-----QLGLAYLAQGDLTAARKN 55
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
+ P + + A + +A+ N +
Sbjct: 56 LEKAVEADPQDYRTQLGMAFYAQRIG-----ENSAAEQRYQQAMKLAPGNGTVLNNYGAF 110
Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN------QLAAKE 193
+ Q + +L ++ + N+ Y R + +
Sbjct: 111 LCSLGQYVSAQQQFSAAALLPDYGQVADSLENAGYCFLRANQDKQARVLLSRALKYDPDK 170
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDA-EHAEEAMARLVEAYVALALMDEAREVVSL 252
E +R + QL+L Y + E++ + D +
Sbjct: 171 GEPLLAEAQRYFGEGNRAQAQLLLDVYQHTLPASAESLWLQIRFAALAGRQDSVQRYGKQ 230
Query: 253 IQERYPQGYWAR 264
+ +PQ +
Sbjct: 231 LARSFPQSKQYQ 242
>gi|330896137|gb|EGH28358.1| tol-pal system protein YbgF [Pseudomonas syringae pv. japonica str.
M301072PT]
Length = 253
Score = 41.3 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 16/111 (14%), Positives = 36/111 (32%), Gaps = 1/111 (0%)
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI-GRYYLKRGEYVAAIPRFQLVLANY 220
I + + F + A G L +G+ A F V Y
Sbjct: 141 FDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGDLQGAGQAFAKVSQQY 200
Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+++ +L + L D+ + ++ + +YP A+ + ++
Sbjct: 201 PKHAKVPDSLYKLADVERRLGHTDKVKGILQQVVAQYPGTSAAQLAQRDLQ 251
Score = 39.4 bits (89), Expect = 0.58, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 32/83 (38%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
D ++ YE A +K ++F KA + F R +P + A + V + G
Sbjct: 126 EPPDPAKEKLYYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGD 185
Query: 110 YQQAASLGEEYITQYPESKNVDY 132
Q A + QYP+ V
Sbjct: 186 LQGAGQAFAKVSQQYPKHAKVPD 208
Score = 39.0 bits (88), Expect = 0.69, Method: Composition-based stats.
Identities = 14/67 (20%), Positives = 28/67 (41%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
E +K ++ A F L Y ++ +A A L E +A + A + +
Sbjct: 136 YYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGDLQGAGQAFAK 195
Query: 253 IQERYPQ 259
+ ++YP+
Sbjct: 196 VSQQYPK 202
>gi|330892248|gb|EGH24909.1| tol-pal system protein YbgF [Pseudomonas syringae pv. mori str.
301020]
Length = 248
Score = 41.3 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 16/111 (14%), Positives = 36/111 (32%), Gaps = 1/111 (0%)
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI-GRYYLKRGEYVAAIPRFQLVLANY 220
I + + F + A G L +G+ A F V Y
Sbjct: 136 FDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGDLQGAGQAFAKVSQQY 195
Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+++ +L + L D+ + ++ + +YP A+ + ++
Sbjct: 196 PKHAKVPDSLYKLADVERRLGHTDKVKGILQQVVAQYPGTSAAQLAQRDLQ 246
Score = 39.4 bits (89), Expect = 0.58, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 32/83 (38%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
D ++ YE A +K ++F KA + F R +P + A + V + G
Sbjct: 121 EPPDPAKEKLYYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGD 180
Query: 110 YQQAASLGEEYITQYPESKNVDY 132
Q A + QYP+ V
Sbjct: 181 LQGAGQAFAKVSQQYPKHAKVPD 203
Score = 39.0 bits (88), Expect = 0.69, Method: Composition-based stats.
Identities = 14/67 (20%), Positives = 28/67 (41%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
E +K ++ A F L Y ++ +A A L E +A + A + +
Sbjct: 131 YYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGDLQGAGQAFAK 190
Query: 253 IQERYPQ 259
+ ++YP+
Sbjct: 191 VSQQYPK 197
>gi|330877971|gb|EGH12120.1| tol-pal system protein YbgF [Pseudomonas syringae pv. glycinea str.
race 4]
Length = 253
Score = 41.3 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 16/111 (14%), Positives = 36/111 (32%), Gaps = 1/111 (0%)
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI-GRYYLKRGEYVAAIPRFQLVLANY 220
I + + F + A G L +G+ A F V Y
Sbjct: 141 FDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGDLQGAGQAFAKVSQQY 200
Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+++ +L + L D+ + ++ + +YP A+ + ++
Sbjct: 201 PKHAKVPDSLYKLADVERRLGHTDKVKGILQQVVAQYPGTSAAQLAQRDLQ 251
Score = 39.4 bits (89), Expect = 0.56, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 32/83 (38%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
D ++ YE A +K ++F KA + F R +P + A + V + G
Sbjct: 126 EPPDPTKEKLYYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGD 185
Query: 110 YQQAASLGEEYITQYPESKNVDY 132
Q A + QYP+ V
Sbjct: 186 LQGAGQAFAKVSQQYPKHAKVPD 208
Score = 39.0 bits (88), Expect = 0.67, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 28/77 (36%)
Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242
E +K ++ A F L Y ++ +A A L E +A
Sbjct: 126 EPPDPTKEKLYYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGD 185
Query: 243 MDEAREVVSLIQERYPQ 259
+ A + + + ++YP+
Sbjct: 186 LQGAGQAFAKVSQQYPK 202
>gi|330868620|gb|EGH03329.1| tol-pal system protein YbgF [Pseudomonas syringae pv. aesculi str.
0893_23]
Length = 262
Score = 41.3 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 16/111 (14%), Positives = 36/111 (32%), Gaps = 1/111 (0%)
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI-GRYYLKRGEYVAAIPRFQLVLANY 220
I + + F + A G L +G+ A F V Y
Sbjct: 150 FDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGDLQGAGQAFAKVSQQY 209
Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+++ +L + L D+ + ++ + +YP A+ + ++
Sbjct: 210 PKHAKVPDSLYKLADVERRLGHTDKVKGILQQVVAQYPGTSAAQLAQRDLQ 260
Score = 39.4 bits (89), Expect = 0.58, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 32/83 (38%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
D ++ YE A +K ++F KA + F R +P + A + V + G
Sbjct: 135 EPPDPAKEKLYYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGD 194
Query: 110 YQQAASLGEEYITQYPESKNVDY 132
Q A + QYP+ V
Sbjct: 195 LQGAGQAFAKVSQQYPKHAKVPD 217
Score = 39.0 bits (88), Expect = 0.69, Method: Composition-based stats.
Identities = 14/67 (20%), Positives = 28/67 (41%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
E +K ++ A F L Y ++ +A A L E +A + A + +
Sbjct: 145 YYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGDLQGAGQAFAK 204
Query: 253 IQERYPQ 259
+ ++YP+
Sbjct: 205 VSQQYPK 211
>gi|313673764|ref|YP_004051875.1| tetratricopeptide tpr_1 repeat-containing protein [Calditerrivibrio
nitroreducens DSM 19672]
gi|312940520|gb|ADR19712.1| Tetratricopeptide TPR_1 repeat-containing protein [Calditerrivibrio
nitroreducens DSM 19672]
Length = 863
Score = 41.3 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 12/88 (13%), Positives = 32/88 (36%)
Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
+ ++ ++ + A + D + EA+ L ++Y+A
Sbjct: 763 QPDNIKKSAYRLYFKSAENVFISKNYQNAIKNYLNYIKYAPKDDPNHPEALYFLGKSYIA 822
Query: 240 LALMDEAREVVSLIQERYPQGYWARYVE 267
D A + ++ + +R+P +A +
Sbjct: 823 TGDNDLALKYLTDLTKRFPNNQYATLAK 850
Score = 37.1 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 37/235 (15%), Positives = 86/235 (36%), Gaps = 17/235 (7%)
Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQN-----FSKAYEYFNQCSRDFPFAGVARKSLL 98
+ + D + ++ + + +L+ A F++ R FP + + +++L
Sbjct: 162 DKLIEKNPLDKYGEEALFIQGLSYLELGKESDKALFSAASTFDEFIRKFPRSKLLPEAML 221
Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP---YDQRAT 155
SA + G +A + +E I + K ++ Y +G ++++ + Y
Sbjct: 222 KSAETKEKLGFKNEAIFVYQEMIKNVKDEKYLNIAYTKIGELFSELGQPDKALKYFTDYL 281
Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE---------VEIGRYYLKRGEY 206
+ S I + KG + ++ K+ + Y +G+
Sbjct: 282 QKTKPENSPIYGYVGSIYAQKGDFEKASDFFSKYKPKKIDEITPSTLYWMAVTYEHKGDE 341
Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
AA+ F Y D + + AM + E + D A +++ + ++PQ
Sbjct: 342 DAALKLFTTFYNKYQDNNYTDMAMYKSGEILLKKGKNDIALDILKDAKNKFPQKK 396
>gi|253583598|ref|ZP_04860796.1| conserved hypothetical protein [Fusobacterium varium ATCC 27725]
gi|251834170|gb|EES62733.1| conserved hypothetical protein [Fusobacterium varium ATCC 27725]
Length = 470
Score = 41.3 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 13/96 (13%), Positives = 33/96 (34%)
Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234
+ + +G+ + Y AI ++ L + E +
Sbjct: 371 HFEKALSINKDYAETKDIYFYMGQSNFQLENYQKAIDNYKKALNIEKSDDKKAEIYYNMG 430
Query: 235 EAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
AY L +E+R + +++++P+ W+ +
Sbjct: 431 IAYDKLGNKEESRNYFTFVRQKFPKSSWSTKSSIYL 466
>gi|237800228|ref|ZP_04588689.1| tol-pal system protein YbgF [Pseudomonas syringae pv. oryzae str.
1_6]
gi|237806416|ref|ZP_04593120.1| tol-pal system protein YbgF [Pseudomonas syringae pv. oryzae str.
1_6]
gi|331023085|gb|EGI03142.1| tol-pal system protein YbgF [Pseudomonas syringae pv. oryzae str.
1_6]
gi|331027529|gb|EGI07584.1| tol-pal system protein YbgF [Pseudomonas syringae pv. oryzae str.
1_6]
Length = 252
Score = 41.3 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 16/111 (14%), Positives = 36/111 (32%), Gaps = 1/111 (0%)
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI-GRYYLKRGEYVAAIPRFQLVLANY 220
I + + F + A G L +G+ A F V Y
Sbjct: 140 FDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGDLQGAGQAFAKVSQQY 199
Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+++ +L + L D+ + ++ + +YP A+ + ++
Sbjct: 200 PKHAKVPDSLYKLADVERRLGHTDKVKGILQQVVAQYPGTSAAQLAQRDLQ 250
Score = 39.4 bits (89), Expect = 0.58, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 32/83 (38%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
D ++ YE A +K ++F KA + F R +P + A + V + G
Sbjct: 125 EPPDPAKEKLYYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGD 184
Query: 110 YQQAASLGEEYITQYPESKNVDY 132
Q A + QYP+ V
Sbjct: 185 LQGAGQAFAKVSQQYPKHAKVPD 207
Score = 39.0 bits (88), Expect = 0.69, Method: Composition-based stats.
Identities = 14/67 (20%), Positives = 28/67 (41%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
E +K ++ A F L Y ++ +A A L E +A + A + +
Sbjct: 135 YYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGDLQGAGQAFAK 194
Query: 253 IQERYPQ 259
+ ++YP+
Sbjct: 195 VSQQYPK 201
>gi|86158329|ref|YP_465114.1| lytic transglycosylase [Anaeromyxobacter dehalogenans 2CP-C]
gi|85774840|gb|ABC81677.1| Lytic transglycosylase [Anaeromyxobacter dehalogenans 2CP-C]
Length = 750
Score = 41.3 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 8/58 (13%), Positives = 24/58 (41%)
Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
++ + +++ A++A+ + EARE ++ + +P G + +
Sbjct: 330 YRQLARDFAGHAFADDALFFAADLLARNGKPQEAREALAALVRDHPGGDYREEARFRL 387
>gi|28871115|ref|NP_793734.1| hypothetical protein PSPTO_3970 [Pseudomonas syringae pv. tomato
str. DC3000]
gi|28854365|gb|AAO57429.1| conserved protein of unknown function [Pseudomonas syringae pv.
tomato str. DC3000]
Length = 272
Score = 41.3 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 16/111 (14%), Positives = 36/111 (32%), Gaps = 1/111 (0%)
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI-GRYYLKRGEYVAAIPRFQLVLANY 220
I + + F + A G L +G+ A F V Y
Sbjct: 160 FDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGDLQGAGQAFAKVSQQY 219
Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+++ +L + L D+ + ++ + +YP A+ + ++
Sbjct: 220 PKHAKVPDSLYKLADVERRLGHTDKVKGILQQVVAQYPGTSAAQLAQRDLQ 270
Score = 39.4 bits (89), Expect = 0.58, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 32/83 (38%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
D ++ YE A +K ++F KA + F R +P + A + V + G
Sbjct: 145 EPPDPAKEKLYYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGD 204
Query: 110 YQQAASLGEEYITQYPESKNVDY 132
Q A + QYP+ V
Sbjct: 205 LQGAGQAFAKVSQQYPKHAKVPD 227
Score = 39.0 bits (88), Expect = 0.69, Method: Composition-based stats.
Identities = 14/67 (20%), Positives = 28/67 (41%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
E +K ++ A F L Y ++ +A A L E +A + A + +
Sbjct: 155 YYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGDLQGAGQAFAK 214
Query: 253 IQERYPQ 259
+ ++YP+
Sbjct: 215 VSQQYPK 221
>gi|71736705|ref|YP_275905.1| hypothetical protein PSPPH_3765 [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|298488201|ref|ZP_07006237.1| tol-pal system protein [Pseudomonas savastanoi pv. savastanoi NCPPB
3335]
gi|71557258|gb|AAZ36469.1| conserved hypothetical protein [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|298157259|gb|EFH98343.1| tol-pal system protein [Pseudomonas savastanoi pv. savastanoi NCPPB
3335]
Length = 272
Score = 41.3 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 16/111 (14%), Positives = 36/111 (32%), Gaps = 1/111 (0%)
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI-GRYYLKRGEYVAAIPRFQLVLANY 220
I + + F + A G L +G+ A F V Y
Sbjct: 160 FDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGDLQGAGQAFAKVSQQY 219
Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+++ +L + L D+ + ++ + +YP A+ + ++
Sbjct: 220 PKHAKVPDSLYKLADVERRLGHTDKVKGILQQVVAQYPGTSAAQLAQRDLQ 270
Score = 39.4 bits (89), Expect = 0.56, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 32/83 (38%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
D ++ YE A +K ++F KA + F R +P + A + V + G
Sbjct: 145 EPPDPTKEKLYYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGD 204
Query: 110 YQQAASLGEEYITQYPESKNVDY 132
Q A + QYP+ V
Sbjct: 205 LQGAGQAFAKVSQQYPKHAKVPD 227
Score = 39.0 bits (88), Expect = 0.67, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 28/77 (36%)
Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242
E +K ++ A F L Y ++ +A A L E +A
Sbjct: 145 EPPDPTKEKLYYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGD 204
Query: 243 MDEAREVVSLIQERYPQ 259
+ A + + + ++YP+
Sbjct: 205 LQGAGQAFAKVSQQYPK 221
>gi|66044665|ref|YP_234506.1| TPR repeat-containing protein [Pseudomonas syringae pv. syringae
B728a]
gi|63255372|gb|AAY36468.1| TPR repeat [Pseudomonas syringae pv. syringae B728a]
Length = 248
Score = 41.3 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 16/111 (14%), Positives = 36/111 (32%), Gaps = 1/111 (0%)
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI-GRYYLKRGEYVAAIPRFQLVLANY 220
I + + F + A G L +G+ A F V Y
Sbjct: 136 FDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGDLQGAGQAFAKVSQQY 195
Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+++ +L + L D+ + ++ + +YP A+ + ++
Sbjct: 196 PKHAKVPDSLYKLADVERRLGHTDKVKGILQQVVAQYPGTSAAQLAQRDLQ 246
Score = 39.4 bits (89), Expect = 0.58, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 32/83 (38%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
D ++ YE A +K ++F KA + F R +P + A + V + G
Sbjct: 121 EPPDPAKEKLYYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGD 180
Query: 110 YQQAASLGEEYITQYPESKNVDY 132
Q A + QYP+ V
Sbjct: 181 LQGAGQAFAKVSQQYPKHAKVPD 203
Score = 39.0 bits (88), Expect = 0.69, Method: Composition-based stats.
Identities = 14/67 (20%), Positives = 28/67 (41%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
E +K ++ A F L Y ++ +A A L E +A + A + +
Sbjct: 131 YYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGDLQGAGQAFAK 190
Query: 253 IQERYPQ 259
+ ++YP+
Sbjct: 191 VSQQYPK 197
>gi|328768058|gb|EGF78105.1| hypothetical protein BATDEDRAFT_13321 [Batrachochytrium
dendrobatidis JAM81]
Length = 709
Score = 41.3 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 22/200 (11%), Positives = 52/200 (26%), Gaps = 9/200 (4%)
Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
+Y +++ + N+++A ++F + + + + Q + +
Sbjct: 429 EAMYNLGLVYKRMNNYNEALQWFEKLHSILRSSP-EVIYQIADIYNQQGSTQQAMEWFNI 487
Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
+ S + + + Y V
Sbjct: 488 LISVVPTDPSVLEKLGSMFERDGDKSQAFQYYSESYRYYPCNMDVISWLGAYYVDCEVYE 547
Query: 178 ARFYVTVGRNQLAAKEVEIG----RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
+ +V Y + G Y A ++ + + D E + L
Sbjct: 548 QAIQFFERAILIQPNQVRWPLMIASCYRRSGNYQQAFDTYKRIHEKFPDNI---ECLRFL 604
Query: 234 VEAYVALALMDEAREVVSLI 253
V L + EA E S +
Sbjct: 605 VRICTDLGMK-EATEYASKL 623
>gi|289626504|ref|ZP_06459458.1| tol-pal system protein YbgF [Pseudomonas syringae pv. aesculi str.
NCPPB3681]
Length = 248
Score = 41.3 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 16/111 (14%), Positives = 36/111 (32%), Gaps = 1/111 (0%)
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI-GRYYLKRGEYVAAIPRFQLVLANY 220
I + + F + A G L +G+ A F V Y
Sbjct: 136 FDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGDLQGAGQAFAKVSQQY 195
Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+++ +L + L D+ + ++ + +YP A+ + ++
Sbjct: 196 PKHAKVPDSLYKLADVERRLGHTDKVKGILQQVVAQYPGTSAAQLAQRDLQ 246
Score = 39.4 bits (89), Expect = 0.59, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 32/83 (38%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
D ++ YE A +K ++F KA + F R +P + A + V + G
Sbjct: 121 EPPDPAKEKLYYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGD 180
Query: 110 YQQAASLGEEYITQYPESKNVDY 132
Q A + QYP+ V
Sbjct: 181 LQGAGQAFAKVSQQYPKHAKVPD 203
Score = 39.0 bits (88), Expect = 0.69, Method: Composition-based stats.
Identities = 14/67 (20%), Positives = 28/67 (41%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
E +K ++ A F L Y ++ +A A L E +A + A + +
Sbjct: 131 YYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGDLQGAGQAFAK 190
Query: 253 IQERYPQ 259
+ ++YP+
Sbjct: 191 VSQQYPK 197
>gi|221068060|ref|ZP_03544165.1| tol-pal system protein YbgF [Comamonas testosteroni KF-1]
gi|220713083|gb|EED68451.1| tol-pal system protein YbgF [Comamonas testosteroni KF-1]
Length = 253
Score = 41.3 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 20/122 (16%), Positives = 39/122 (31%), Gaps = 14/122 (11%)
Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
+ Q + + ++ S Y RF++ G +Y
Sbjct: 142 MFRSGKFPEAGQAFAAFLRQWPKSGYTPSVRFWL--------------GNSQYATRDYKN 187
Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
AI F+ V+ + EA + V L AR+ + + + YP A ++
Sbjct: 188 AIANFRSVMTTTPMHARSPEAALSIANCQVELKDTKAARKTLEELLQAYPNSEAAGIAKS 247
Query: 269 LV 270
+
Sbjct: 248 KL 249
>gi|332298580|ref|YP_004440502.1| hypothetical protein Trebr_1953 [Treponema brennaborense DSM 12168]
gi|332181683|gb|AEE17371.1| hypothetical protein Trebr_1953 [Treponema brennaborense DSM 12168]
Length = 1046
Score = 41.3 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 31/234 (13%), Positives = 68/234 (29%), Gaps = 24/234 (10%)
Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
Y A+ + +++ A F+ + + +L + +Y G+ +QA
Sbjct: 573 DDAEAPYIAALASINRRDWQTADTLFSVYLAEA--SDPLPYALFYQGYARYLLGRAEQAY 630
Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT------------------- 155
+ + P + + QM + V A
Sbjct: 631 ASLTAFSAWNPSHALSLTADRIAAVCAVQMHQHVGASDTAWIGKAVGLAESIVKRSEAGA 690
Query: 156 --KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY-LKRGEYVAAIPR 212
+ + + + + + ++ +KR +Y A
Sbjct: 691 ERESAVLFAAGVYDDAGAYEAALDLMKPYLSRQSPFGMNCRYRSALLLVKRKQYDEADAL 750
Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
F V ++ AE+A R E+Y + A + + YP+G +A
Sbjct: 751 FADVERSFPTESLAEDASYRRGESYYTAEAYETAAGRFASYRRTYPRGKYADAA 804
Score = 35.9 bits (80), Expect = 6.5, Method: Composition-based stats.
Identities = 13/70 (18%), Positives = 24/70 (34%)
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
G Y Y A RF Y ++A+ A + + + D+A + +
Sbjct: 769 YRRGESYYTAEAYETAAGRFASYRRTYPRGKYADAASYFGADCFARIGQPDQAILLYESL 828
Query: 254 QERYPQGYWA 263
+P +A
Sbjct: 829 LSSFPASTFA 838
>gi|206891167|ref|YP_002249681.1| hypothetical protein THEYE_A1891 [Thermodesulfovibrio yellowstonii
DSM 11347]
gi|206743105|gb|ACI22162.1| hypothetical protein THEYE_A1891 [Thermodesulfovibrio yellowstonii
DSM 11347]
Length = 349
Score = 41.3 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 19/132 (14%), Positives = 42/132 (31%), Gaps = 13/132 (9%)
Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
+ D + L ++ AR ++
Sbjct: 225 RWDINYGHYLADSGKYEEALYIFQIALDLSDKPEIRADARLERGTVYSRF---------- 274
Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
AA+ + L+L Y + E ++ L L +A++ + ++ YP+
Sbjct: 275 ---LRNPEAALAEYLLILEEYPEIPQKETSLYLTGMTLYELGLKKQAKQRLYQYKKTYPE 331
Query: 260 GYWARYVETLVK 271
G + VET+++
Sbjct: 332 GKYITNVETIIR 343
>gi|119510448|ref|ZP_01629581.1| hypothetical protein N9414_01642 [Nodularia spumigena CCY9414]
gi|119464870|gb|EAW45774.1| hypothetical protein N9414_01642 [Nodularia spumigena CCY9414]
Length = 731
Score = 41.3 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 29/223 (13%), Positives = 62/223 (27%), Gaps = 6/223 (2%)
Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR-DFPFAGVARKSLLMSAFV 103
D + + E+ + + F+KA + + + AR +
Sbjct: 221 DQLVKQPNLKAEEWEI--VGTAYWENNQFAKAGDAYFKAPPTPRNLYRAARGIQIGGKER 278
Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
+ + Y Q E + + + + R + + +
Sbjct: 279 EKAIATYNQLVQKFPEASETGLALLRLSELARSRQEAIPYLDRIIANFPEQASRAIVEKA 338
Query: 164 RIVERYTNS---PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220
+I + NQ A E + K Y A Q + N
Sbjct: 339 KIYQELNEQILAQQAWELLLSQYGSSNQAAEYRWEKAKEQAKAQNYAGAWQWAQPIATNN 398
Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
++ A A + + + L EA+ + ++P Y+A
Sbjct: 399 PNSILAPRAGFWVGKWAIRLGKPQEAKAAYEYVLSQFPYSYYA 441
>gi|256075180|ref|XP_002573898.1| tetratricopeptide repeat protein 10 tpr10 [Schistosoma mansoni]
gi|238659089|emb|CAZ30131.1| tetratricopeptide repeat protein 10, tpr10, putative [Schistosoma
mansoni]
Length = 704
Score = 41.3 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 20/206 (9%), Positives = 60/206 (29%), Gaps = 7/206 (3%)
Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF---VQYSAG 108
D R +Y ++ + + + +A E F + + L+ A
Sbjct: 374 DDTRCVEALYNLGLVCKQLERYEEALEAFFKLYSVLRNSAPVVYQLMDIYEKLGDSTQAQ 433
Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
++ + Y D +++++
Sbjct: 434 EWAMQLHGMVPTDPFLLQRLGDSYEQEGDKSQAFSYYYDSFKYYPCNFDVIEWLGAYYIE 493
Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
++ + ++ I + + G Y A+ ++++ + + E
Sbjct: 494 SQFCEKAIAYFERASLMQPNQIKWQLMIASCHRRSGNYQQALETYRIIHRRFPENI---E 550
Query: 229 AMARLVEAYVALALMDEAREVVSLIQ 254
+ LV + L EA++ ++ ++
Sbjct: 551 CLQFLVRLSSDMDLP-EAQDYITKLK 575
Score = 37.9 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 30/201 (14%), Positives = 61/201 (30%), Gaps = 7/201 (3%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
+KAV+FLK+++F +A + R + + L + + + +
Sbjct: 281 DKAVMFLKQRDFHQAIDTLKSFERKDTRVACSAATNLSFLYFLEGDLLQAEKYADQALSV 340
Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVP----YDQRATKLMLQYMSRIVERYTNSPYVKG 177
+Y + V+ L + RD D L + + ++
Sbjct: 341 DRYNPAALVNKGNVLYQQQQYERARDCYAEALQDDTRCVEALYNLGLVCKQLERYEEALE 400
Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
A F + A ++ Y K G+ A + + RL ++Y
Sbjct: 401 AFFKLYSVLRNSAPVVYQLMDIYEKLGDSTQAQEWAMQLHGMVPTDPFL---LQRLGDSY 457
Query: 238 VALALMDEAREVVSLIQERYP 258
+A + YP
Sbjct: 458 EQEGDKSQAFSYYYDSFKYYP 478
>gi|148262284|ref|YP_001228990.1| TPR repeat-containing protein [Geobacter uraniireducens Rf4]
gi|146395784|gb|ABQ24417.1| Tetratricopeptide TPR_2 repeat protein [Geobacter uraniireducens
Rf4]
Length = 275
Score = 41.3 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 32/88 (36%)
Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243
A +G Y +Y AI FQ V+ NY E AM + A+ L
Sbjct: 185 PKHELTANARYWLGETYYHEKKYDQAILEFQEVIKNYPGKEKVPAAMLKQAMAFKELGDA 244
Query: 244 DEAREVVSLIQERYPQGYWARYVETLVK 271
AR V + E P AR + +K
Sbjct: 245 KSARYVYKKLIEDSPYTDEARIAKEKLK 272
Score = 37.5 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 13/60 (21%), Positives = 19/60 (31%)
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
K G+ A F + + E A L E Y D+A + + YP
Sbjct: 166 KGGDPQKAREYFTKFIELFPKHELTANARYWLGETYYHEKKYDQAILEFQEVIKNYPGKE 225
>gi|189426262|ref|YP_001953439.1| hypothetical protein Glov_3213 [Geobacter lovleyi SZ]
gi|189422521|gb|ACD96919.1| Tetratricopeptide TPR_2 repeat protein [Geobacter lovleyi SZ]
Length = 639
Score = 41.3 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 29/214 (13%), Positives = 59/214 (27%), Gaps = 6/214 (2%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
Y + A + L N +A E + + + P + L +
Sbjct: 369 EKRPAYAEARLKLADIRLGRGNTQEAVEQYVEFLKLKPESADIHLKLARIFVKNKNLNLA 428
Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD---QRATKLMLQYMSRIVE 167
+++ + PE+ Y + + + Q + I
Sbjct: 429 EESYKAVLKLAPDNPEANRELAAVYRAKGATDKAVEHYTKALELQEEDNESRNALVAIYV 488
Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
+ + A ++G Y + EY AI ++ D
Sbjct: 489 KDKKYDELAELLQEAVELAPDDANNHYKLGLIYDFKKEYDNAIASYKKAAELKPD---HA 545
Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
A+ L Y+ + EARE + ++ P
Sbjct: 546 RALHALGRVYMKTGRLSEAREALEAARKADPNME 579
>gi|189426649|ref|YP_001953826.1| hypothetical protein Glov_3605 [Geobacter lovleyi SZ]
gi|189422908|gb|ACD97306.1| Tetratricopeptide TPR_2 repeat protein [Geobacter lovleyi SZ]
Length = 248
Score = 41.3 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 30/242 (12%), Positives = 63/242 (26%), Gaps = 17/242 (7%)
Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
+ + V L G SS R Y+ V FL+E+N++ A ++
Sbjct: 6 LLTALVVVSTLAGCAATSS---------SGRPASYHYQMGVSFLEERNYTAALTDLSEAE 56
Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG-----EEYITQYPESKNVDYVYYLVGM 139
+ P + +L + + +Q + +
Sbjct: 57 KLDPDNAELQYNLGRALTGKRRLDLAEQRYLRALALRPKYSEARNDLGVLYLETGRWDNA 116
Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
L + + + + +V IGR
Sbjct: 117 IQQFRAVKDDLFYPRHDHALINLGLAYLGKGDYSAALEELYTARSADPRNPIVKVAIGRV 176
Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
+G+ A ++ + D +A +L A + + + AR + P
Sbjct: 177 LFAQGKTQQAADEYRRAIEIAPDY---AQAHFQLGLALMKQSQLAAARAAFKEVVRIAPD 233
Query: 260 GY 261
Sbjct: 234 SE 235
>gi|322785507|gb|EFZ12176.1| hypothetical protein SINV_14518 [Solenopsis invicta]
Length = 771
Score = 41.3 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 23/231 (9%), Positives = 55/231 (23%), Gaps = 12/231 (5%)
Query: 35 LVGWERQSSRDVYLDS------VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
L + TD + + +Y +++ KE + +A E F +
Sbjct: 468 LSACAIKKDELNIARELLLCALETDASHVQALYNLGLVYKKENMYEEALECFWKIRNIVR 527
Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
+ + + + S +
Sbjct: 528 HDPQT-LYQIGHLYQLMTDIDQASEWYFKYNQLLGIISSDPGVLQKLGELYDSIGDKQQA 586
Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
+ +++ + + + R+ L +
Sbjct: 587 FQFYNDSHRFYPANFEVIDWIGSYFISMQVAEKALAYFQKAVELAPDEPRWRLLVAACLR 646
Query: 209 AIPRFQLVLANYSD----AEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
+F LA Y D E + L+ L L EA+ + +++
Sbjct: 647 RTGQFHKALAEYQDIHNKFPENIECLKFLIRLCSDLGLK-EAQMYTAELKK 696
>gi|91776689|ref|YP_546445.1| tetratricopeptide region [Methylobacillus flagellatus KT]
gi|91710676|gb|ABE50604.1| Tetratricopeptide region [Methylobacillus flagellatus KT]
Length = 274
Score = 41.3 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 8/57 (14%), Positives = 30/57 (52%)
Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
Q +++ + +++ +AM + + + L+ +D A++ + + +++P A + +
Sbjct: 209 QKLISQHPESDKVPDAMFSIANSQIQLSDVDGAKKTLRELLDKFPDHELAPSAKRRL 265
>gi|320107210|ref|YP_004182800.1| transporter auxiliary protein [Terriglobus saanensis SP1PR4]
gi|319925731|gb|ADV82806.1| transporter auxiliary protein, TonB-ExbB-ExbD/TolA-TolQ-TolR (TonB)
family [Terriglobus saanensis SP1PR4]
Length = 314
Score = 41.3 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 16/116 (13%), Positives = 37/116 (31%), Gaps = 2/116 (1%)
Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
+ ++ + +FY A +G K G++ +A +
Sbjct: 190 YQTAYGDFVGAKYTLASAEFGDVVKFYPDDPLAGNAY--FYLGEIDYKAGKFNSAAKNYD 247
Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
VL Y + R ++ +AL + + + +R+P A + +
Sbjct: 248 HVLEQYPGNAKIPVSHLRKGQSLIALKQNEAGIRELRSLIQRFPNSPEATQARSKL 303
>gi|207728191|ref|YP_002256585.1| hypothetical protein RSMK04568 [Ralstonia solanacearum MolK2]
gi|300704848|ref|YP_003746451.1| associated to tol-pal complex protein (ygcf) [Ralstonia
solanacearum CFBP2957]
gi|206591436|emb|CAQ57048.1| conserved hypothetical protein [Ralstonia solanacearum MolK2]
gi|299072512|emb|CBJ43862.1| putative associated to Tol-Pal complex protein (ygcF) [Ralstonia
solanacearum CFBP2957]
Length = 257
Score = 41.3 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 26/204 (12%), Positives = 55/204 (26%), Gaps = 15/204 (7%)
Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
+N A + + L + K A + ++
Sbjct: 65 NSRNLIDAQNQIETLKSEVARLRGQNEQLQNTVDTLTKQQKDYYADLDARLKRFEPQQAT 124
Query: 129 NVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
G + K S V++Y SPY+ A+F++
Sbjct: 125 VDGRDGMVQPGEKDEYDAALKTFQGGDFKGAGNQFSAFVKKYPQSPYLPLAQFWL----- 179
Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
G + +Y + + + A EA+ ++ AR
Sbjct: 180 ---------GNALYAQRDYKGSTYVLENMARANPQHPKAPEALLQVATNQGESGQKAAAR 230
Query: 248 EVVSLIQERYPQGYWARYVETLVK 271
+ + + +YP A+ + +K
Sbjct: 231 KTLEAVVAQYPGTEQAKTASSRLK 254
>gi|148264741|ref|YP_001231447.1| lytic transglycosylase, catalytic [Geobacter uraniireducens Rf4]
gi|146398241|gb|ABQ26874.1| Lytic transglycosylase, catalytic [Geobacter uraniireducens Rf4]
Length = 715
Score = 41.3 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 29/227 (12%), Positives = 63/227 (27%), Gaps = 15/227 (6%)
Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQA 113
E+ + + +S+A + FN R P K + + + Y+ A
Sbjct: 224 SPSELLHQGTILFDLGKYSQAVKTFNAARRQSPDLNGDFLTKLQFKTGQALFKSRHYKDA 283
Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE------ 167
E + + + + D V + + + A++ +D KL +
Sbjct: 284 ELAFNELLKKNLKKETSDDVRFWLARTNAKIGKDEEAFNTYLKLAESSPKSTLADDALLE 343
Query: 168 --RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS---- 221
S A + L + + F+ ++
Sbjct: 344 AALIRKSQKKWDATLPLLQKSLHLYPDSNQSKNVIWEIAWGSYQTRDFKTAAEYFNKLAN 403
Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
E+A+ + +A A+ S + YP G +
Sbjct: 404 QESTREKALYWRGRSLLAAGDPKSAQGCFSDLMSEYPLG-YYALAYK 449
Score = 38.2 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 28/204 (13%), Positives = 53/204 (25%), Gaps = 1/204 (0%)
Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
++ A F + +P + +L SA + A S+
Sbjct: 137 GNTLYDSGDYKGALSAFGEFIEKYPAGADSLSALHKSALCREQLADMTGAVSILRSIALN 196
Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
YP S + + P+ + + + AR
Sbjct: 197 YPASAVAVKAGEDLERVGRKGADIAPFSPSELLHQGTILFDLGKYSQAVKTFNAARRQSP 256
Query: 184 VGRNQLAAK-EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242
K + + G+ K Y A F +L E +++ L +
Sbjct: 257 DLNGDFLTKLQFKTGQALFKSRHYKDAELAFNELLKKNLKKETSDDVRFWLARTNAKIGK 316
Query: 243 MDEAREVVSLIQERYPQGYWARYV 266
+EA + E P+ A
Sbjct: 317 DEEAFNTYLKLAESSPKSTLADDA 340
>gi|258592131|emb|CBE68436.1| protein of unknown function [NC10 bacterium 'Dutch sediment']
Length = 235
Score = 41.3 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 14/72 (19%), Positives = 27/72 (37%)
Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
G YL A+ + ++ ++ EA L AY + + +A + I
Sbjct: 154 GDTYLAERNNDKAVETYSRLIEQFAQEPLLPEAQLHLARAYRGMGRLKDAGALYEQIVAT 213
Query: 257 YPQGYWARYVET 268
+P WA+ +
Sbjct: 214 HPNTGWAQRAQA 225
Score = 37.1 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 11/56 (19%), Positives = 20/56 (35%), Gaps = 1/56 (1%)
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL-IQER 256
+ + V+ Y A EA RL Y + +EAR + +++
Sbjct: 85 DDAKQTEGLRLLHDVVHRYPGTAAAAEATLRLGTYYYTVGKYNEARTAYTTYLEKN 140
>gi|94501051|ref|ZP_01307575.1| hypothetical protein RED65_05329 [Oceanobacter sp. RED65]
gi|94426798|gb|EAT11782.1| hypothetical protein RED65_05329 [Oceanobacter sp. RED65]
Length = 914
Score = 41.3 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 29/211 (13%), Positives = 69/211 (32%), Gaps = 23/211 (10%)
Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
+ + +Y++AV ++ + A + F + P + + + +A
Sbjct: 555 EKNKVKDVQEKLAASIYKQAVALVEAKQIDNAVDTFMRVGERVPSSPIRITAHYDAASYL 614
Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
A K+ +A L + Q+P+ K + L
Sbjct: 615 MKAQKWDRAQELLLSFREQFPKHKLAKDIPSK----------------------LIIAYE 652
Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
+ + + Y + + RN+ + Y+ K + A+ + NY
Sbjct: 653 NTQEWDKAAYELETIWRTSRVRNEQRIALYQAAEYFEKANDMENAMTMLKRYAHNYPKPF 712
Query: 225 HAE-EAMARLVEAYVALALMDEAREVVSLIQ 254
+A+ EA++RL Y ++ + + +
Sbjct: 713 NAQLEAISRLENIYNKQEQHEKRQYWLDKLI 743
>gi|332711481|ref|ZP_08431412.1| hypothetical protein LYNGBM3L_67770 [Lyngbya majuscula 3L]
gi|332349459|gb|EGJ29068.1| hypothetical protein LYNGBM3L_67770 [Lyngbya majuscula 3L]
Length = 922
Score = 41.3 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 21/234 (8%), Positives = 58/234 (24%), Gaps = 36/234 (15%)
Query: 23 ALTIFFSIAVCFLVGW----ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
L I F ++ +G + + T ++ E+ V + + ++ A E
Sbjct: 12 FLGILFLFSLTVCIGLGHLPSIAQPAEPGNMATTQAANPSQLVEQGVEYYQAGDYQGAIE 71
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+ + + + S ++ + + K + + + + +
Sbjct: 72 PWQNALKLYQQSNNYTNSAIVRENLARAYQKIGHIQEAISNWEQAILDYQQLRNWQQMGR 131
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
M + Q + L + + +A +V
Sbjct: 132 MKTELAQAYNSFGQPRKAIALLC----------GAPDTDENYKNKPSCVKDSALKVARAH 181
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
K A+ + AY+ D+ + +
Sbjct: 182 QDWKGEAA----------------------ALGSMGNAYILRGDYDQGIQYLQT 213
>gi|312891213|ref|ZP_07750734.1| tetratricopeptide TPR_3 [Mucilaginibacter paludis DSM 18603]
gi|311296292|gb|EFQ73440.1| tetratricopeptide TPR_3 [Mucilaginibacter paludis DSM 18603]
Length = 619
Score = 41.3 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 27/211 (12%), Positives = 67/211 (31%), Gaps = 3/211 (1%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
+ ++L A ++Q + +P + +++ +A + Y G + A +
Sbjct: 401 DLGDVYLLNNRPWDATLTYSQVEKGYPGTNIGQEAQYRNAKLAYYTGDFTWAKGQLDVLK 460
Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
+ D + + +S + + + + +
Sbjct: 461 AATSQLIANDALNLSLLISDHTAFDSTGNALKMY--ARADLLIYKQDPDKAVITLDSIDK 518
Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV-AL 240
V G + R +++ +Y A+ Q + N++ A++A+ L + Y L
Sbjct: 519 VFPGNTLTDDILMAKARILIQKKDYQLALAPLQDIEKNHASGLWADDAVFMLGDIYENHL 578
Query: 241 ALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+A+ I YP W +
Sbjct: 579 NDKAKAQICYQKIITDYPGSTWLNEARKRFR 609
>gi|53711959|ref|YP_097951.1| hypothetical protein BF0669 [Bacteroides fragilis YCH46]
gi|60680161|ref|YP_210305.1| hypothetical protein BF0595 [Bacteroides fragilis NCTC 9343]
gi|265765303|ref|ZP_06093578.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|52214824|dbj|BAD47417.1| putative outer membrane protein probably involved in nutrient
binding [Bacteroides fragilis YCH46]
gi|60491595|emb|CAH06347.1| putative membrane protein [Bacteroides fragilis NCTC 9343]
gi|263254687|gb|EEZ26121.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
Length = 504
Score = 41.3 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 26/265 (9%), Positives = 48/265 (18%), Gaps = 18/265 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK--- 75
+ K +I A+ L D + Y A+ + +
Sbjct: 6 MKKIYKSITLVAAILSLSSCGNDWLDRKPADGIPSED-AITNYNDALTA-RTGMYDGIQG 63
Query: 76 ---AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132
A Y+ + S +
Sbjct: 64 NSNATSYYGARMFYYGDVRADDMQARTQGMRSSSCYEMLYTVDDAPNMWNIPYNVIRRAN 123
Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI---VERYTNSPYVKGARFYVTVGRNQL 189
+ L + + + R PY + V
Sbjct: 124 RLIEAINEKKVTDATEAQIGKIYSEALVVRALVHFDLVRIYGMPYTADNGASLGVPVIVK 183
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQL-------VLANYSDAEHAEEAMARLVEAYVALAL 242
+ ++ Y I + A A L Y+
Sbjct: 184 PLERNDLPSRNTVAEVYTQVITDLTDAINSGYLAKDQTPGYINEWAAKALLTRVYLTKGD 243
Query: 243 MDEAREVVSLIQERYPQGYWARYVE 267
+ A +V I P W
Sbjct: 244 NENALKVAEDIITNSPYKLWTNEEY 268
>gi|297738576|emb|CBI27821.3| unnamed protein product [Vitis vinifera]
Length = 1091
Score = 41.3 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 27/197 (13%), Positives = 60/197 (30%), Gaps = 9/197 (4%)
Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
+ K F KA + F + + P A +L + A ++ +
Sbjct: 204 GLCCYKLGQFEKARKAFQRVLQLDPENVEALVALGIMDLHTNDASGIRKGMEKMQRAFEI 263
Query: 124 YPESKNV-----DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
YP ++ ++ + + + + + R +S
Sbjct: 264 YPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEK 323
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD----AEHAEEAMARLV 234
+ + + K + Y G+ + F+ L+N+ EA+ L
Sbjct: 324 AGLYYMASVKESNKPHDFVLPYYGLGQVQLKLGDFRSSLSNFEKVLEVYPENCEALKALG 383
Query: 235 EAYVALALMDEAREVVS 251
YV L ++A+E +
Sbjct: 384 HIYVQLGQTEKAQEYLR 400
>gi|225024318|ref|ZP_03713510.1| hypothetical protein EIKCOROL_01193 [Eikenella corrodens ATCC
23834]
gi|224942903|gb|EEG24112.1| hypothetical protein EIKCOROL_01193 [Eikenella corrodens ATCC
23834]
Length = 221
Score = 41.3 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 18/133 (13%), Positives = 38/133 (28%), Gaps = 2/133 (1%)
Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY- 199
++ + + Q ++ S ++ RF G +
Sbjct: 86 HSSAEPAAAPAENPQEQAYQQALQLYRSGLYSQALQQLRFAERSGSGSRTEQNALFLLMQ 145
Query: 200 -YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
+ K + I Q ++ A EA+ + + D AR + + YP
Sbjct: 146 SHEKLRNCESVILTGQRFATRFAANPKAAEALYSVGSCQWGMQQRDIARVTWRKLIQTYP 205
Query: 259 QGYWARYVETLVK 271
AR ++
Sbjct: 206 NSPAARRAGQRIQ 218
>gi|126662007|ref|ZP_01733006.1| TPR-domain containing protein [Flavobacteria bacterium BAL38]
gi|126625386|gb|EAZ96075.1| TPR-domain containing protein [Flavobacteria bacterium BAL38]
Length = 1003
Score = 41.3 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 27/239 (11%), Positives = 59/239 (24%), Gaps = 16/239 (6%)
Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA--GVARKSLLMSA 101
+ ++ R + KA F +A F Q + + + A
Sbjct: 448 KKSISENKEAKFTARATFWKAETEYNLDQFEEAKLSFKQFLNATEASNTPEFKNANYNLA 507
Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
+ + +Y+ A + + + K YL M A +
Sbjct: 508 YSYFKLKEYESAIEYFDSFSKSVKDDKIRLTDAYLRLGDCNFMAAKYWPAMDAYNKAIDM 567
Query: 162 M--------------SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
V + E+G Y+ + +
Sbjct: 568 KSVDADYAAFQKGISYGFVSKPDRKIEDLEKFAKTYPTSQYADDALYELGNTYVNQNQNE 627
Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
I + +++ Y + + +A+ + Y D A + YP +
Sbjct: 628 KGIATYDKLISGYKSSSYVAKAILKQGLIYYNGNKEDLALTKFKKVVAEYPNSPESLEA 686
>gi|228910825|ref|ZP_04074634.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
thuringiensis IBL 200]
gi|228848776|gb|EEM93621.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
thuringiensis IBL 200]
Length = 273
Score = 41.3 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 13/73 (17%), Positives = 24/73 (32%)
Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
+Q+ K LT S ++ L + + L E+ EKA L+++
Sbjct: 1 MFQMKKLLLTALISTSIFGLAACGGKDKDEKKLVVGASNVPHAEILEKAKPLLEKKGIEL 60
Query: 76 AYEYFNQCSRDFP 88
+ F
Sbjct: 61 EIKKFQDYVLPNK 73
>gi|170701075|ref|ZP_02892052.1| tol-pal system protein YbgF [Burkholderia ambifaria IOP40-10]
gi|170134015|gb|EDT02366.1| tol-pal system protein YbgF [Burkholderia ambifaria IOP40-10]
Length = 249
Score = 40.9 bits (93), Expect = 0.16, Method: Composition-based stats.
Identities = 18/111 (16%), Positives = 33/111 (29%)
Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
+ +Y + R + V + + + G + AA F+
Sbjct: 94 RQQKEYYQDLDTRLKKFEPQQATIDGVEGTVQPGETDALSAAQQQFRNGNFKAAAASFRS 153
Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
+A Y + + A L A AL + + +YPQ A
Sbjct: 154 FIAKYPQSPYQPTAQYWLGNAQYALRDYRGSTATWQTVVSKYPQHPRAADA 204
Score = 38.2 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 16/125 (12%), Positives = 40/125 (32%), Gaps = 14/125 (11%)
Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
+ K + +Y SPY A++++ G +Y
Sbjct: 136 QQQFRNGNFKAAAASFRSFIAKYPQSPYQPTAQYWL--------------GNAQYALRDY 181
Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
+ +Q V++ Y A +A+ + + A++ + +Y A+
Sbjct: 182 RGSTATWQTVVSKYPQHPRAADALVAIGTNQLEQGQKAAAKKTFEQVVSQYAGSNAAQTA 241
Query: 267 ETLVK 271
+ ++
Sbjct: 242 QGKIE 246
>gi|300310548|ref|YP_003774640.1| Tol-Pal cell envelope complex subunit YbgF protein [Herbaspirillum
seropedicae SmR1]
gi|300073333|gb|ADJ62732.1| Tol-Pal cell envelope complex subunit YbgF protein [Herbaspirillum
seropedicae SmR1]
Length = 251
Score = 40.9 bits (93), Expect = 0.17, Method: Composition-based stats.
Identities = 22/122 (18%), Positives = 45/122 (36%), Gaps = 14/122 (11%)
Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
+ K + ++RY S Y A+++ G + +Y
Sbjct: 140 QFKGGDYKGAANAFADFLKRYPQSGYAPSAQYWQ--------------GNSLYAQRDYKG 185
Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
AI Q+V+ NY D A +A+ + + L A++ + + +YP A+ +
Sbjct: 186 AIAAQQVVVKNYPDNPKAADALLNIASSQAELKDKAAAKKTLEQLIAKYPNTPAAQTGKE 245
Query: 269 LV 270
+
Sbjct: 246 RM 247
Score = 39.0 bits (88), Expect = 0.65, Method: Composition-based stats.
Identities = 13/77 (16%), Positives = 31/77 (40%)
Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
+++ Y+ A+ K ++ A F + +P +G A + Y+ Y+ A +
Sbjct: 129 SEQQAYDAALSQFKGGDYKGAANAFADFLKRYPQSGYAPSAQYWQGNSLYAQRDYKGAIA 188
Query: 116 LGEEYITQYPESKNVDY 132
+ + YP++
Sbjct: 189 AQQVVVKNYPDNPKAAD 205
>gi|29169140|gb|AAO66314.1| hypothetical adventurous gliding motility protein U [Myxococcus
xanthus]
Length = 1219
Score = 40.9 bits (93), Expect = 0.17, Method: Composition-based stats.
Identities = 11/116 (9%), Positives = 34/116 (29%), Gaps = 4/116 (3%)
Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
+ + + + + R K + ++ A+
Sbjct: 131 EFYWEESKFFFFEANRKDDDLIQAMNRNDAAGQQRA----KAEKAEFSAKQKEYGKLAVE 186
Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
++ ++ Y + E +E + L + + +A + E++PQ +
Sbjct: 187 QYTKIVQEYPNFERTDEVLFFLGQYLMEDGQDRKALVAFKRLVEKHPQSKFIPDAY 242
Score = 39.8 bits (90), Expect = 0.38, Method: Composition-based stats.
Identities = 19/212 (8%), Positives = 60/212 (28%), Gaps = 17/212 (8%)
Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFS--KAYEYFNQCSRDFPFAGVARKSLLMSA 101
+ + S ++ + +E F +A + + A +
Sbjct: 110 KKIISLSPDPKEAPSLLFRLGEFYWEESKFFFFEANRKDDDLIQAMNRNDAAGQQR---- 165
Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
+ ++ + + +Y + + + + L
Sbjct: 166 -AKAEKAEFSAKQKEYGKLAVEQYTKIVQEYPNFERTDEVLFFLGQYLMEDGQDRKALVA 224
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
R+VE++ S ++ A F + KR E A+ ++ +
Sbjct: 225 FKRLVEKHPQSKFIPDAYFAFGEYYFNNSKG---------KRPELEKALVAYKKAAE-FP 274
Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+++ A+ + + + + A++ +
Sbjct: 275 ESQVYAFALYKQGWCHYNMGDFESAKDKFKTV 306
Score = 38.6 bits (87), Expect = 0.92, Method: Composition-based stats.
Identities = 14/104 (13%), Positives = 32/104 (30%), Gaps = 3/104 (2%)
Query: 166 VERYTNSPYVKG---ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
V + Y + + ++ ++ E+ A + + ++
Sbjct: 683 VNEWARRFYANDKLAVGKFRDDLAKLIEQSSFKLVSQLEEKKEFEKAAEAYLAFVKDFPQ 742
Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
E A+ A+ Y +D+A EV + YP+
Sbjct: 743 TEIADLALYNASVDYYKAKRLDKAIEVRKRLFAEYPRSKHVPDS 786
Score = 35.9 bits (80), Expect = 6.0, Method: Composition-based stats.
Identities = 22/221 (9%), Positives = 53/221 (23%), Gaps = 9/221 (4%)
Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
+ + R ++ +++ KA F + P + +
Sbjct: 190 KIVQEYPNFERTDEVLFFLGQYLMEDGQDRKALVAFKRLVEKHPQSKFIPDAYFAFGEYY 249
Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
++ K ++ + VY Y+ +
Sbjct: 250 FNNSKGKRPELEKALVAYKKAAEFPESQVYAFALY----KQGWCHYNMGDFESAKDKFKT 305
Query: 165 --IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
+ + ++ + L + R + G+ A F V N +
Sbjct: 306 VVLYGELAGANALEKDGGKGGGRSSLLREARTDYVRAFAHHGDVAQARAEFGKVATN-PE 364
Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
+ +L Y EA + + + P A
Sbjct: 365 DRFTM--LKQLANLYYGDGKDREAAITYNGLIKEKPLSPEA 403
>gi|91978604|ref|YP_571263.1| hypothetical protein RPD_4143 [Rhodopseudomonas palustris BisB5]
gi|91685060|gb|ABE41362.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB5]
Length = 345
Score = 40.9 bits (93), Expect = 0.17, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 35/97 (36%), Gaps = 3/97 (3%)
Query: 166 VERYTNSPYVKGARFYVTVGRNQLA---AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
+ + + A + +G Y +R Y + F V + Y
Sbjct: 231 YMQRRDYALAEETMRNFATKYPNDALTPDSQYWLGESYFQRQMYRDSAEAFLAVTSKYDK 290
Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
+ A +A+ RL ++ AL + A + I +YP+
Sbjct: 291 SAKAPDALLRLGQSLSALKEKEAACAALGEIGRKYPK 327
>gi|332667614|ref|YP_004450402.1| hypothetical protein Halhy_5706 [Haliscomenobacter hydrossis DSM
1100]
gi|332336428|gb|AEE53529.1| Tetratricopeptide TPR_1 repeat-containing protein
[Haliscomenobacter hydrossis DSM 1100]
Length = 1046
Score = 40.9 bits (93), Expect = 0.17, Method: Composition-based stats.
Identities = 18/214 (8%), Positives = 59/214 (27%), Gaps = 7/214 (3%)
Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
+ + + ++ + +E+N+ ++ +Y ++ S+
Sbjct: 459 QKSLENPIDLSVQAVALFWLGDVAHREKNYQESAQYMDRFLGLTR-------SISNLPEE 511
Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
A + + + Q D + L+
Sbjct: 512 SSVATANYIQGYNLIKQDNYERARGFFQAAVDGINRNRGQYRNDKIANNVLGDATLRLGD 571
Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
+ ++ + + RG I + + ++ +
Sbjct: 572 SYFKFNQYDNALRYYNEAIDRKSANFDYAIYQKAIIEGLRGRRTEEIVSLERLTRDFPGS 631
Query: 224 EHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
E A++A+ R+ + Y + ++A + + +Y
Sbjct: 632 EFADDALLRIGQTYQEIGRSNDAIPHLQNLVTKY 665
Score = 39.8 bits (90), Expect = 0.42, Method: Composition-based stats.
Identities = 25/232 (10%), Positives = 48/232 (20%), Gaps = 10/232 (4%)
Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
+ Y Y + EQ++++A + + L F Q
Sbjct: 170 DVIAEADGDYYAPSNYYMGLSSFFEQDYAQAASSLQIVENNPTYRPYIPFYLTQILFAQK 229
Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
A + V + +
Sbjct: 230 KYQDVIAYAEPKANDKGIRDLKEIQQLVGQSYFELGNYQRALPYLEYYQENSKKLREEEL 289
Query: 166 VERYTNSPYVKGARFYVTVGRN-------QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
+ + + R + YLK G+ A+
Sbjct: 290 YQIGYTQYQTGNFQKAIQTLRPLSGAESPIGQNAMFYLADCYLKVGQKNNALNALAAAKR 349
Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
D EEA + L EA + P + + + L+
Sbjct: 350 LNFDPLIKEEASFNYAKLAYELNQPREAVATLQDFA---PNSRYYQDAQRLL 398
>gi|302327544|gb|ADL26745.1| hypothetical protein FSU_2475 [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 658
Score = 40.9 bits (93), Expect = 0.17, Method: Composition-based stats.
Identities = 35/242 (14%), Positives = 80/242 (33%), Gaps = 17/242 (7%)
Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
++++ D Q + A + + + KA + + + + L+
Sbjct: 242 NAKEIENLNDRERQTAGEQSAECLVNTKEYLKAADEYKALYKVEAYEKQRPHYLVRIGET 301
Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT-------- 155
AG+ A + + T+YP+++ Y+ +G ++
Sbjct: 302 TLLAGRNADAYVIFNKVNTEYPKTEQSSRSYFNMGDYEQSKTQNYELAMSYYDSSYIARS 361
Query: 156 --------KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
+ + R+V + + ++ + ++ A + + + LK E
Sbjct: 362 ISEYAQKSRERRNALRRLVSMRDRNEEILQSKDSIPNMKSFFANEFMIAELFLLKLSEAD 421
Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVA-LALMDEAREVVSLIQERYPQGYWARYV 266
+A+ R V+ D A Y L D A E+ I E+YP +A+
Sbjct: 422 SAVARLTNVIEKSDDTASVMRASYARAFIYDEFLHDPDTAEELYKEIIEKYPNTDYAKQA 481
Query: 267 ET 268
+
Sbjct: 482 QA 483
>gi|296105261|ref|YP_003615407.1| cellulose synthase subunit BcsC [Enterobacter cloacae subsp.
cloacae ATCC 13047]
gi|295059720|gb|ADF64458.1| cellulose synthase subunit BcsC [Enterobacter cloacae subsp.
cloacae ATCC 13047]
Length = 1160
Score = 40.9 bits (93), Expect = 0.17, Method: Composition-based stats.
Identities = 26/223 (11%), Positives = 60/223 (26%), Gaps = 10/223 (4%)
Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
+S+ +D + ++ +A + +++A E + P L
Sbjct: 444 SLSASQRRSIDDIERSLTNEQLSAQAEQLENQGKYAQAAEVQRRRLALSPGDVWITYRLS 503
Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
+ + + + V + + +
Sbjct: 504 RDLYSAGQRSQADTLMRQL--ASQKPTDPDQVYANGLYLSGNDQDRAALAHLETLPRSQW 561
Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV----EIGRYYLKRGEYVAAIPRFQ 214
+ + +R ++ + A G+ Q A + R L ++
Sbjct: 562 NGNIQELADRLQSNQVLDTANRLRDSGKEQEAENLLRQQPASTRIDLTLADWAQQRGDLS 621
Query: 215 LVLANYSDA----EHAEEAMARLVEAYVALALMDEAREVVSLI 253
YS E+A+ L E Y A D AR ++ +
Sbjct: 622 AAKTAYSGVLQREPQNEDAILGLTEIYSAQGDKDAARAELAKL 664
>gi|83814130|ref|YP_445326.1| TPR repeat-containing protein [Salinibacter ruber DSM 13855]
gi|83755524|gb|ABC43637.1| tetratricopeptide repeat domain protein [Salinibacter ruber DSM
13855]
Length = 191
Score = 40.9 bits (93), Expect = 0.17, Method: Composition-based stats.
Identities = 18/112 (16%), Positives = 34/112 (30%)
Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
+ + +R + + + A+ RG + A ++ +
Sbjct: 67 FYAANALYQRDEYDRALTYYQRFEKEKDFIGASAYAAQAAIQETRGSFERAGGLYEQAAS 126
Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
Y + A + +AY + A V IQE YP A E +
Sbjct: 127 QYQNKLTAPRYLLNAGQAYEEAGQYEAAIGVYERIQEEYPDSEQASNAERYL 178
>gi|149176357|ref|ZP_01854971.1| hypothetical protein PM8797T_07539 [Planctomyces maris DSM 8797]
gi|148844709|gb|EDL59058.1| hypothetical protein PM8797T_07539 [Planctomyces maris DSM 8797]
Length = 1027
Score = 40.9 bits (93), Expect = 0.17, Method: Composition-based stats.
Identities = 38/217 (17%), Positives = 73/217 (33%), Gaps = 22/217 (10%)
Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
+ + + ++ A+ K+ + A E F + +D+P +
Sbjct: 20 CLILLLLSLLPLPLVHADKASDEFQLAIGLYKQNRWELATERFQKYLKDYPTDASVPLAK 79
Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
+ KYQ+A ++ E++ Q+P++ N+ I + Y
Sbjct: 80 FYLGLTLVNQQKYQEARTILREFVKQHPQNNNLPDA--------LYRIAECSYLLDDLDA 131
Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
+ + ++ Y N + A G L+RG+ AI FQ L
Sbjct: 132 AEKEFTEFLKLYPNHALEEWAYP--------------YFGDVLLRRGKADLAIKSFQRSL 177
Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
+ AE+A L +Y+ DEA + I
Sbjct: 178 ERHPKGAMAEDAQFGLASSYLRNKQSDEAEKRFKAIA 214
Score = 40.9 bits (93), Expect = 0.17, Method: Composition-based stats.
Identities = 26/217 (11%), Positives = 68/217 (31%), Gaps = 21/217 (9%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
Y + + A + + + + F + A S L +A + K
Sbjct: 627 PESPLTAEAAYMQGRSLENNKQLDAAVDVYQKVLQQFAPSRYAMLSGLQAARTLFQLKKI 686
Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
+ E + ++P+ N+D + + Y+ + R++
Sbjct: 687 DEVNLAYEALLQKFPKVDNLDKILDEWA--------LINYEAEQFAKSDEIFRRLITETP 738
Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
+S + +A K + + + + + Q V ++
Sbjct: 739 DSEL-ADNARLSLAESDLIAGKLEPAAKAFTELQSDPKSDKKVQQV------------SL 785
Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
RL+E + L + + + +R+P+ +A + +
Sbjct: 786 YRLIEINLELQKWELVDKFSKELLKRFPENEYAAFAQ 822
Score = 38.2 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 13/153 (8%), Positives = 41/153 (26%), Gaps = 5/153 (3%)
Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
+ + ++ +P + Y + +
Sbjct: 1 MMNSRTRNSLNFNQRAPRFCLILLLLSLLPLPLVHADKASDEFQLAIGLYKQNRWELATE 60
Query: 180 FYVTVGRNQLAAK-----EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234
+ ++ + +G + + +Y A + + + + +A+ R+
Sbjct: 61 RFQKYLKDYPTDASVPLAKFYLGLTLVNQQKYQEARTILREFVKQHPQNNNLPDALYRIA 120
Query: 235 EAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
E L +D A + + + YP +
Sbjct: 121 ECSYLLDDLDAAEKEFTEFLKLYPNHALEEWAY 153
Score = 36.7 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 28/221 (12%), Positives = 72/221 (32%), Gaps = 11/221 (4%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL------LMSAFVQ 104
+ + A +L+ + +A + F + + + + Q
Sbjct: 181 PKGAMAEDAQFGLASSYLRNKQSDEAEKRFKAIAGQKNHSRGSDAQMSLATSLFDRGQYQ 240
Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
+A + + E N Y YY + + + + +
Sbjct: 241 SAADAFLELPEKFPESPLGITARLNAGYAYYDLKQYAKAIQQFDLVTKDPKHAANALYWK 300
Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL-----KRGEYVAAIPRFQLVLAN 219
V + +++ + ++ E Y L + G+ AA F V+
Sbjct: 301 GVSLKGEQQLPAAITAFELALKSKPSPQQKESTTYQLADALLRSGKPAAAKALFLEVVKQ 360
Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
+ +E A++++ +EA + + EA ++ + ++ +PQ
Sbjct: 361 FPKSELADDSLHFAIEAALLTDELAEAEQLSAQFEKTFPQS 401
Score = 36.3 bits (81), Expect = 4.7, Method: Composition-based stats.
Identities = 21/255 (8%), Positives = 59/255 (23%), Gaps = 22/255 (8%)
Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
+ + Q +Y + L+ Q + ++ + + FP A +
Sbjct: 764 AKAFTELQSDPKSDKKVQQVSLYRLIEINLELQKWELVDKFSKELLKRFPENEYAAFAQF 823
Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
A + + A + + + +Y +
Sbjct: 824 HEAEAALYQNQVEIAQAALLKLAAKDRLETLSQEPWYPRVWVLLAETYFRQKKYKEVAET 883
Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG-------------- 204
+ + + + +
Sbjct: 884 VDRFRTWDPDSPFLYQAEEVLGRSLKNQAKFDEARKVFQQIIDSEHGRRTATAAKCQFLL 943
Query: 205 --------EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
++ A+ + V Y E A+ + + AL +A++ +R
Sbjct: 944 AETLMIQEKFKEALLAYLQVDIQYKFPEWQAPALYQAAMCHEALNEWPQAQKTYQDYLKR 1003
Query: 257 YPQGYWARYVETLVK 271
+P+ + +K
Sbjct: 1004 FPEHELVPQAKERLK 1018
>gi|326799635|ref|YP_004317454.1| Tetratricopeptide TPR_1 repeat-containing protein [Sphingobacterium
sp. 21]
gi|326550399|gb|ADZ78784.1| Tetratricopeptide TPR_1 repeat-containing protein [Sphingobacterium
sp. 21]
Length = 1048
Score = 40.9 bits (93), Expect = 0.17, Method: Composition-based stats.
Identities = 30/243 (12%), Positives = 67/243 (27%), Gaps = 17/243 (6%)
Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD--------FPFAGVARKSL 97
+ Y KA + + + +A F++ + + +A A
Sbjct: 464 SEQNPYDPELLALATYWKAEAMYEVRKYGEATTNFSKFLQYPAAKNTDVYNYANYALAYA 523
Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
++ Y E I + + + M Y++ +
Sbjct: 524 AFRNDNYRTSANYFAKFLNSGEPIELNTRNDAIARLGDSYFMLKDYGNAMEQYNKLMSTK 583
Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK---------EVEIGRYYLKRGEYVA 208
+ + A +++ + LA EI + +GE
Sbjct: 584 AKTQDYALFQSGIIRGLQGDADGKISIMTDLLARYPNSNYADDANFEIPYTFFLKGENEI 643
Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
AI Q ++ Y + + A+ + D A + E+YP A+
Sbjct: 644 AIQGLQDMIEKYPRSSYVPRALVTIGLVQYNSDNNDAAVRTFQRVVEQYPTTEEAKQALK 703
Query: 269 LVK 271
++
Sbjct: 704 SIQ 706
>gi|32267088|ref|NP_861120.1| paralysed flagella protein PflA [Helicobacter hepaticus ATCC 51449]
gi|32263140|gb|AAP78186.1| paralysed flagella protein PflA [Helicobacter hepaticus ATCC 51449]
Length = 789
Score = 40.9 bits (93), Expect = 0.17, Method: Composition-based stats.
Identities = 9/50 (18%), Positives = 16/50 (32%)
Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
Y + E + L AY + + EA+ YP + +
Sbjct: 249 KKYPTDANVPEVLYYLGNAYADMRIPQEAKYYFDRTISEYPNSRYMPLAK 298
>gi|260439095|ref|ZP_05792911.1| putative tetratricopeptide repeat-containing domain protein
[Butyrivibrio crossotus DSM 2876]
gi|292808407|gb|EFF67612.1| putative tetratricopeptide repeat-containing domain protein
[Butyrivibrio crossotus DSM 2876]
Length = 460
Score = 40.9 bits (93), Expect = 0.17, Method: Composition-based stats.
Identities = 7/58 (12%), Positives = 26/58 (44%)
Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+ + +Y ++EA+ L ++ L D+ +E +++ ++ + + ++
Sbjct: 398 KYLELSYKFNSESDEAIYYLAMSHFRLNENDKGKEYADILKSKFGNSKFTGDITKYME 455
>gi|115378273|ref|ZP_01465441.1| hypothetical adventurous gliding motility protein U [Stigmatella
aurantiaca DW4/3-1]
gi|310821097|ref|YP_003953455.1| tetratricopeptide repeat-containing protein [Stigmatella aurantiaca
DW4/3-1]
gi|115364715|gb|EAU63782.1| hypothetical adventurous gliding motility protein U [Stigmatella
aurantiaca DW4/3-1]
gi|309394169|gb|ADO71628.1| Tetratricopeptide repeat protein [Stigmatella aurantiaca DW4/3-1]
Length = 1209
Score = 40.9 bits (93), Expect = 0.17, Method: Composition-based stats.
Identities = 15/118 (12%), Positives = 37/118 (31%), Gaps = 6/118 (5%)
Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR------ 212
+ +S + + Y ++ + AA+ ++ + R
Sbjct: 132 IYRLSELYWEKSKYLYRLEMDRFLAAEKAFDAAEARGEKVEAPQQDHRDSERYRAETMSL 191
Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
++ +L +Y EH +E + L EA + + +PQ + +
Sbjct: 192 YEDLLRDYPKYEHMDEVLFAQGYNLNELNRGPEAVKRYQQLIRDFPQSQFVPDAYIQL 249
Score = 38.2 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 31/229 (13%), Positives = 66/229 (28%), Gaps = 24/229 (10%)
Query: 34 FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93
+ + +S D+R Y+ AV+ +F A F + +P +
Sbjct: 610 LVAACDTYNSLYPNNPDEIDLR-----YQAAVILYDRNHFVDAARRFGEIITKYPEERRS 664
Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV----- 148
R + ++ FV S ++Q+ +L +++ SK V
Sbjct: 665 RDAADLTMFVLESREEWQELNTLSRQFLGNKKLSKPGTEFAARVAKVVEGSQYKWVDEIV 724
Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
++ K + V + + + E
Sbjct: 725 YRKEQNPKKAGELFLSFVTEFPK--------------SENADRALTYAMIIFQEAAELDR 770
Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
+ VL Y D+ + + + Y +A +A E+ + Y
Sbjct: 771 GVEAGTRVLNEYPDSIFSLKVRYTMAGFYEKMAEFQKAAEMYESFVDAY 819
>gi|108760059|ref|YP_633028.1| TPR repeat-containing protein [Myxococcus xanthus DK 1622]
gi|108463939|gb|ABF89124.1| tetratricopeptide repeat protein [Myxococcus xanthus DK 1622]
Length = 1218
Score = 40.9 bits (93), Expect = 0.18, Method: Composition-based stats.
Identities = 11/116 (9%), Positives = 34/116 (29%), Gaps = 4/116 (3%)
Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
+ + + + + R K + ++ A+
Sbjct: 131 EFYWEESKFFFFEANRKDDDLIQAMNRNDAAGQQRA----KAEKAEFSAKQKEYGKLAVE 186
Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
++ ++ Y + E +E + L + + +A + E++PQ +
Sbjct: 187 QYTKIVQEYPNFERTDEVLFFLGQYLMEDGQDRKALVAFKRLVEKHPQSKFIPDAY 242
Score = 39.8 bits (90), Expect = 0.39, Method: Composition-based stats.
Identities = 19/212 (8%), Positives = 60/212 (28%), Gaps = 17/212 (8%)
Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFS--KAYEYFNQCSRDFPFAGVARKSLLMSA 101
+ + S ++ + +E F +A + + A +
Sbjct: 110 KKIISLSPDPKEAPSLLFRLGEFYWEESKFFFFEANRKDDDLIQAMNRNDAAGQQR---- 165
Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
+ ++ + + +Y + + + + L
Sbjct: 166 -AKAEKAEFSAKQKEYGKLAVEQYTKIVQEYPNFERTDEVLFFLGQYLMEDGQDRKALVA 224
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
R+VE++ S ++ A F + KR E A+ ++ +
Sbjct: 225 FKRLVEKHPQSKFIPDAYFAFGEYYFNNSKG---------KRPELEKALVAYKKAAE-FP 274
Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+++ A+ + + + + A++ +
Sbjct: 275 ESQVYAFALYKQGWCHYNMGDFESAKDKFKTV 306
Score = 38.6 bits (87), Expect = 0.94, Method: Composition-based stats.
Identities = 14/104 (13%), Positives = 32/104 (30%), Gaps = 3/104 (2%)
Query: 166 VERYTNSPYVKG---ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
V + Y + + ++ ++ E+ A + + ++
Sbjct: 683 VNEWARRFYANDKLAVGKFRDDLAKLIEQSSFKLVSQLEEKKEFEKAAEAYLAFVKDFPQ 742
Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
E A+ A+ Y +D+A EV + YP+
Sbjct: 743 TEIADLALYNASVDYYKAKRLDKAIEVRKRLFAEYPRSKHVPDS 786
Score = 35.9 bits (80), Expect = 6.3, Method: Composition-based stats.
Identities = 22/221 (9%), Positives = 53/221 (23%), Gaps = 9/221 (4%)
Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
+ + R ++ +++ KA F + P + +
Sbjct: 190 KIVQEYPNFERTDEVLFFLGQYLMEDGQDRKALVAFKRLVEKHPQSKFIPDAYFAFGEYY 249
Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
++ K ++ + VY Y+ +
Sbjct: 250 FNNSKGKRPELEKALVAYKKAAEFPESQVYAFALY----KQGWCHYNMGDFESAKDKFKT 305
Query: 165 --IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
+ + ++ + L + R + G+ A F V N +
Sbjct: 306 VVLYGELAGANALEKDGGKGGGRSSLLREARTDYVRAFAHHGDVAQARAEFGKVATN-PE 364
Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
+ +L Y EA + + + P A
Sbjct: 365 DRFTM--LKQLANLYYGDGKDREAAITYNGLIKEKPLSPEA 403
>gi|65316976|ref|ZP_00389935.1| COG1464: ABC-type metal ion transport system, periplasmic
component/surface antigen [Bacillus anthracis str.
A2012]
Length = 273
Score = 40.9 bits (93), Expect = 0.18, Method: Composition-based stats.
Identities = 26/224 (11%), Positives = 56/224 (25%), Gaps = 4/224 (1%)
Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
+Q+ K LT S ++ L + + + L E+ EKA L+++
Sbjct: 1 MFQMKKLLLTALISTSIFGLAACGGKDNDEKKLVVGASNVPHAEILEKAKPLLEKKGIEL 60
Query: 76 AYEYFNQCSRDFP---FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132
+ F + +++ + + + + + Y
Sbjct: 61 EVKKFQDYVLPNKSLADKDLDANYFQHIPYLEKEIKDKKYEFEVAGKIHLEPIGVYSQKY 120
Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
A +I L + I++ VK + L K
Sbjct: 121 KSLKELPDGATIIMSNSVADHGRGLAILQKEGILKIKDGVDPVKATPKDIADNPKNLKFK 180
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
+ D + E A +E+
Sbjct: 181 TDIEPGLLPQVYNNKEGDAVLINSNYAI-DTKLNPEKDAIAIES 223
>gi|150004546|ref|YP_001299290.1| putative helicase [Bacteroides vulgatus ATCC 8482]
gi|149932970|gb|ABR39668.1| putative helicase [Bacteroides vulgatus ATCC 8482]
Length = 669
Score = 40.9 bits (93), Expect = 0.18, Method: Composition-based stats.
Identities = 25/216 (11%), Positives = 61/216 (28%), Gaps = 7/216 (3%)
Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
+ ++ + ++ Y +AV + +F + E F
Sbjct: 437 FSQRFNNRQSIEKALKQAQADVQYVEAVQHFDKGDFERFLEQFFLAIHSRYDIEKPLIKR 496
Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
+ + + L +++ Q + YYL+G D
Sbjct: 497 FIRKKLGIINNLKVENKRLKDQFHVQRKNLEKYAREYYLMGNECIIQAHDSRAAIANYDK 556
Query: 158 ML---QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
+ + R + + + V N+ + + RG+ A+ +
Sbjct: 557 AIELNPSYTDAWIRKGITLHNDKEYYEAEVCLNEAVRLSPALFKAIYNRGKNRLALDNIE 616
Query: 215 LVLANYSDA----EHAEEAMARLVEAYVALALMDEA 246
L ++ A +A +A + + +EA
Sbjct: 617 GALGDFDRAVSLKPEHPKAHEYFGDALMRIGKEEEA 652
>gi|241662343|ref|YP_002980703.1| tol-pal system protein YbgF [Ralstonia pickettii 12D]
gi|309780842|ref|ZP_07675583.1| tol-pal system protein YbgF [Ralstonia sp. 5_7_47FAA]
gi|240864370|gb|ACS62031.1| tol-pal system protein YbgF [Ralstonia pickettii 12D]
gi|308920524|gb|EFP66180.1| tol-pal system protein YbgF [Ralstonia sp. 5_7_47FAA]
Length = 261
Score = 40.9 bits (93), Expect = 0.18, Method: Composition-based stats.
Identities = 25/204 (12%), Positives = 56/204 (27%), Gaps = 15/204 (7%)
Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
+N A + + L S K A + ++
Sbjct: 69 NSKNLIDAQNQIETLKSEVARLRGQNEVLQNSVDTLTKQQKDYYADLDARLKKFEPQQAT 128
Query: 129 NVDYV-YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
+ K S V++Y SPY+ A+F++
Sbjct: 129 VDGREGMVQPNEKPEYDAALKAFQGGDFKGAGNQFSAFVKKYPQSPYLPLAQFWL----- 183
Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
G + +Y + + + + A +A+ ++ AR
Sbjct: 184 ---------GNALYAQRDYKGSSYVLENMARSNPQHPKAPDALLQVATNQGESGQKAAAR 234
Query: 248 EVVSLIQERYPQGYWARYVETLVK 271
+ + + +YP A+ ++ +K
Sbjct: 235 KTLESVVSQYPGTEQAKTAQSRLK 258
>gi|253575536|ref|ZP_04852873.1| tetratricopeptide TPR_2 repeat protein [Paenibacillus sp. oral
taxon 786 str. D14]
gi|251845183|gb|EES73194.1| tetratricopeptide TPR_2 repeat protein [Paenibacillus sp. oral
taxon 786 str. D14]
Length = 578
Score = 40.9 bits (93), Expect = 0.18, Method: Composition-based stats.
Identities = 32/200 (16%), Positives = 60/200 (30%), Gaps = 3/200 (1%)
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
+E+AV L + KA +YF + P V ++ + E
Sbjct: 26 FERAVSSLDRYRYDKALKYFRKAVEYEPNNPVNHCNMAGILSEMGDYAASNEVLQTVLEE 85
Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
I M + + Q++S E Y
Sbjct: 86 IDPSMTECYFYMANNYANMDMFEAAEEALIRYLEEDEQGQFLSEAEEMIDLLQYELDRPT 145
Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
+ +++ E + R L+ G++ A+ + ++ + D A L Y L
Sbjct: 146 KLKSIKSRHGVYEHDQARALLEEGKFAQAVKMLEELVQSLPDFLA---ARNNLALGYYYL 202
Query: 241 ALMDEAREVVSLIQERYPQG 260
L +A E V + + P
Sbjct: 203 GLFHKAVETVEEVLVKDPGN 222
>gi|237736850|ref|ZP_04567331.1| predicted protein [Fusobacterium mortiferum ATCC 9817]
gi|229420712|gb|EEO35759.1| predicted protein [Fusobacterium mortiferum ATCC 9817]
Length = 492
Score = 40.9 bits (93), Expect = 0.18, Method: Composition-based stats.
Identities = 15/100 (15%), Positives = 34/100 (34%)
Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
E Y + + + +G+ Y + Y A+ ++ L + E
Sbjct: 379 ENYVEAALYFEKALEIDKNYIEKKDIYFYLGQSYFRTENYSEAVNDYKNSLNLEKNDEKK 438
Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
E + AY L ++A ++ +++ Y W+
Sbjct: 439 AEIYYNIGMAYNKLGDNEQAVNYLTYVRQNYKNSPWSVKS 478
>gi|226330925|ref|ZP_03806443.1| hypothetical protein PROPEN_04848 [Proteus penneri ATCC 35198]
gi|225201720|gb|EEG84074.1| hypothetical protein PROPEN_04848 [Proteus penneri ATCC 35198]
Length = 110
Score = 40.9 bits (93), Expect = 0.18, Method: Composition-based stats.
Identities = 13/67 (19%), Positives = 25/67 (37%)
Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
+ +Y AI + NY + + A L + Y D+A +++ + YP+
Sbjct: 1 MNSKDYDKAIVELNNFINNYPKSSYQSNAQFWLGQMYYLKGNKDQAASTFAIVVKNYPKS 60
Query: 261 YWARYVE 267
A
Sbjct: 61 QKASEAF 67
Score = 39.8 bits (90), Expect = 0.39, Method: Composition-based stats.
Identities = 19/121 (15%), Positives = 42/121 (34%), Gaps = 14/121 (11%)
Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
+ + + ++ + Y S Y A+F++ K+
Sbjct: 1 MNSKDYDKAIVELNNFINNYPKSSYQSNAQFWLGQMYYLKGNKDQAAST----------- 49
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
F +V+ NY ++ A EA ++ D A+ V + ++YP A+ +
Sbjct: 50 ---FAIVVKNYPKSQKASEAFYKIGLIMQEKGQKDNAKAVYQQVIKQYPNSAGAKLAQKQ 106
Query: 270 V 270
+
Sbjct: 107 L 107
>gi|330340424|ref|NP_001164648.2| transmembrane and TPR repeat-containing protein 2 [Rattus
norvegicus]
Length = 836
Score = 40.9 bits (93), Expect = 0.18, Method: Composition-based stats.
Identities = 20/225 (8%), Positives = 56/225 (24%), Gaps = 8/225 (3%)
Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
++ +Y L+ ++ + +A + + + P +
Sbjct: 587 CSEIPDENLKDPHAHKSSVTSCLYNLGKLYHEQGRYEEALSVYREAIQKMPRQFAPQSLY 646
Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
M K +A E + + Y + + + +A +
Sbjct: 647 NMMGEAYMRLSKLPEAEHWYMESLRSKTDHIPAHLTYGKLLALTGRKSEAEKFFLKAIE- 705
Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
L + ++ +R + AA+ + ++
Sbjct: 706 -LDPTKGNCYMHYGQFLLEESRLTEAAEMAKKAAELDSTEFDVVFNAAHMLRQASLNEAA 764
Query: 218 ANYSD-----AEHAEEAMARLVEAYVALALMDEAR-EVVSLIQER 256
Y D + A+ L + +A + +Q +
Sbjct: 765 EKYYDLAARLRPNYPAALMNLGAILHLNGRLQKAEANYLRALQLK 809
>gi|187927782|ref|YP_001898269.1| tol-pal system protein YbgF [Ralstonia pickettii 12J]
gi|187724672|gb|ACD25837.1| tol-pal system protein YbgF [Ralstonia pickettii 12J]
Length = 261
Score = 40.9 bits (93), Expect = 0.18, Method: Composition-based stats.
Identities = 25/204 (12%), Positives = 56/204 (27%), Gaps = 15/204 (7%)
Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
+N A + + L S K A + ++
Sbjct: 69 NSKNLIDAQNQIETLKSEVARLRGQNEVLQNSVDTLTKQQKDYYADLDARLKKFEPQQAT 128
Query: 129 NVDYV-YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
+ K S V++Y SPY+ A+F++
Sbjct: 129 VDGREGMVQPNEKPEYDAALKAFQGGDFKGAGNQFSAFVKKYPQSPYLPLAQFWL----- 183
Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
G + +Y + + + + A +A+ ++ AR
Sbjct: 184 ---------GNALYAQRDYKGSSYVLENMARSNPQHPKAPDALLQVATNQGESGQKAAAR 234
Query: 248 EVVSLIQERYPQGYWARYVETLVK 271
+ + + +YP A+ ++ +K
Sbjct: 235 KTLESVVSQYPGTEQAKTAQSRLK 258
>gi|330507774|ref|YP_004384202.1| TPR-repeat-containing protein [Methanosaeta concilii GP-6]
gi|328928582|gb|AEB68384.1| TPR-repeat protein [Methanosaeta concilii GP-6]
Length = 432
Score = 40.9 bits (93), Expect = 0.18, Method: Composition-based stats.
Identities = 24/200 (12%), Positives = 45/200 (22%), Gaps = 2/200 (1%)
Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
D ++ Y K + + +A + +Q P ++ + + Q
Sbjct: 229 DPQFAEAWYNKGTALGRLGKYDEAIKACDQAISIDPQLAETWTIKGIALYDLGKYDEAIQ 288
Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY-DQRATKLMLQYMSRIVERYTN 171
A Q E+ V Y + I+ + + + + Y
Sbjct: 289 AYDQAISINPQIAEAWYNKGVALTALGKYDEAIKACDQAISINPQDAFAWTIKGIALYDL 348
Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231
Y A + + S EA
Sbjct: 349 GKY-DEAIQAYDQANRINPQFAEAWYNKGVALTALGKYDEAIKACDQAISINPQFAEAWY 407
Query: 232 RLVEAYVALALMDEAREVVS 251
AL DEA +
Sbjct: 408 NKGVVLKALGKYDEAIKAFE 427
>gi|323699693|ref|ZP_08111605.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfovibrio
sp. ND132]
gi|323459625|gb|EGB15490.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfovibrio
desulfuricans ND132]
Length = 274
Score = 40.9 bits (93), Expect = 0.18, Method: Composition-based stats.
Identities = 24/235 (10%), Positives = 66/235 (28%), Gaps = 31/235 (13%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + + I + V + S RE E+A + + +A +
Sbjct: 1 MRRILVLILLAATVFAVAACSSSGS------------PGREDIERARDSYSKGFYLEAEK 48
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+ + + P +++ A + S A + E +
Sbjct: 49 DYERYLQVEPQGKFRKEAWDRLAEIAVSIKGDLDRAVVLLEAMYLELGDDP------DTA 102
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
+ +V + ++ + + +P ++ + R
Sbjct: 103 WKIMFQLGEVYSELGNNPKAIECFEKCLIHAQGNP-------------EHTYKTQLRMAR 149
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
Y G Y + + +D E + L ++Y ++ +A + + +
Sbjct: 150 LYRNMGSYDLVAGTLENCADSAADDEAKARCLYELAQSYTFISSWSQASKTLDSL 204
>gi|242018035|ref|XP_002429488.1| tpr repeat nuclear phosphoprotein, putative [Pediculus humanus
corporis]
gi|212514426|gb|EEB16750.1| tpr repeat nuclear phosphoprotein, putative [Pediculus humanus
corporis]
Length = 1217
Score = 40.9 bits (93), Expect = 0.18, Method: Composition-based stats.
Identities = 29/199 (14%), Positives = 66/199 (33%), Gaps = 18/199 (9%)
Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
+ S+A ++F + A L Q G Q+ + + ++
Sbjct: 548 DKGQISEASDWFKDALQINNDHPDAWSLLGNLHLAQMEWGPGQKKFERILKNSSTSSDAY 607
Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY-------------- 174
++ + + + Q RD ++R + L +++ + +
Sbjct: 608 SLIALGNVWLQTLHQPTRDKEREKRHQERALAMYKQVLRNDPRNIWAANGIGAVLAHKGA 667
Query: 175 VKGARFYVTVGRNQLAAKEVEI---GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231
+ AR R A Y+++ +Y++AI ++ L + H E +
Sbjct: 668 INEARDVFAQVREATADFCDVWLNIAHIYVEQKQYISAIQMYENCLRKFYKYPHV-EVLQ 726
Query: 232 RLVEAYVALALMDEAREVV 250
L AY + EA+ +
Sbjct: 727 YLARAYFKAGKLKEAKMTL 745
>gi|153840013|ref|ZP_01992680.1| lipoprotein, ComL family [Vibrio parahaemolyticus AQ3810]
gi|149746444|gb|EDM57459.1| lipoprotein, ComL family [Vibrio parahaemolyticus AQ3810]
Length = 66
Score = 40.9 bits (93), Expect = 0.18, Method: Composition-based stats.
Identities = 11/65 (16%), Positives = 24/65 (36%), Gaps = 9/65 (13%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + LT ++++ F G + + + E+Y A + L+ N+ A E
Sbjct: 1 MKRQTLTGLLAVSLLF--GCASK-------EEIVPDVPPSELYADAQVSLQSGNWLSAIE 51
Query: 79 YFNQC 83
Sbjct: 52 KLVSL 56
>gi|115374915|ref|ZP_01462187.1| tetratricopeptide repeat family [Stigmatella aurantiaca DW4/3-1]
gi|310819227|ref|YP_003951585.1| tetratricopeptide repeat-containing protein [Stigmatella aurantiaca
DW4/3-1]
gi|115368042|gb|EAU67005.1| tetratricopeptide repeat family [Stigmatella aurantiaca DW4/3-1]
gi|309392299|gb|ADO69758.1| Tetratricopeptide repeat protein [Stigmatella aurantiaca DW4/3-1]
Length = 1091
Score = 40.9 bits (93), Expect = 0.18, Method: Composition-based stats.
Identities = 17/127 (13%), Positives = 39/127 (30%), Gaps = 12/127 (9%)
Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL------------KR 203
+ R++ + N+PY+ +F + + + + R
Sbjct: 53 DRAIGETERLIAKSRNAPYLPDLQFRLAELYVEKSRYVYYLQAESRPEGASGAIVSPETR 112
Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
A+ + +L Y D ++ L L DE + + + +YP
Sbjct: 113 LMKNKAVQMYYRLLREYPDFHDGDKVTFYLAHEQRELGQFDEMLKTLGDLTRKYPSSPLR 172
Query: 264 RYVETLV 270
E ++
Sbjct: 173 LEAEQIL 179
>gi|255530277|ref|YP_003090649.1| tetratricopeptide domain-containing protein [Pedobacter heparinus
DSM 2366]
gi|255343261|gb|ACU02587.1| Tetratricopeptide TPR_3 [Pedobacter heparinus DSM 2366]
Length = 602
Score = 40.9 bits (93), Expect = 0.18, Method: Composition-based stats.
Identities = 23/211 (10%), Positives = 68/211 (32%), Gaps = 3/211 (1%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
+ +++ Q +A+ + Q ++ F + ++ SA + + G + A S +
Sbjct: 385 DLGDIYILTQQPWEAFLIYEQVAKQFDNQEIGNEARYRSARLSFYQGNFAYAKSQSDVLK 444
Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
+ + D + + ++ + R + + +
Sbjct: 445 ASTSQLISNDALNLSLLIADNLQTPTDSNALKMYADAEMLQFRNLPM--KAIAKLDSINI 502
Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
+ + + Y+K E A+ + ++ + A++A+ L + Y
Sbjct: 503 AFPNNSLTDDILMAKSKIYIKSNETDKAVAALKAIIDLKDSSIWADDALFTLADLYEKSG 562
Query: 242 LMDE-AREVVSLIQERYPQGYWARYVETLVK 271
+E A+ + + YP + +
Sbjct: 563 KDNEQAKNLYQKLINDYPGSMYTAEARKRFR 593
>gi|108761475|ref|YP_630180.1| TPR repeat-containing protein [Myxococcus xanthus DK 1622]
gi|108465355|gb|ABF90540.1| MJ0042 family finger-like domain/tetratricopeptide repeat protein
[Myxococcus xanthus DK 1622]
Length = 1628
Score = 40.9 bits (93), Expect = 0.18, Method: Composition-based stats.
Identities = 25/217 (11%), Positives = 51/217 (23%)
Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
+ +Y A++ + F++A + + P + + +
Sbjct: 1405 NEPSNHEALYYLALVKARRLEFTQALDNMRKAVERAPNRPDYHYAYGVILRDAKNLPDAM 1464
Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
A E + ++ L G + + I +A + + I + Y
Sbjct: 1465 SAWRKTVELDGSHADAHEALGHALLEGGQFDEAIASFEASLKADPRRTRVLGSIGDAYFA 1524
Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231
+ A + E S A
Sbjct: 1525 AARWNDAIKRYQSALKADPKLTYVYYKVARAFTEQAQHAKAIDWYRKATSLDSENPMAYY 1584
Query: 232 RLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
L AY EA + R P + +E
Sbjct: 1585 YLGFAYKERNKRREAVQAFKDYLSRKPDATDRKDIED 1621
>gi|228942153|ref|ZP_04104693.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
thuringiensis serovar berliner ATCC 10792]
gi|228975082|ref|ZP_04135641.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
thuringiensis serovar thuringiensis str. T01001]
gi|228981722|ref|ZP_04142017.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
thuringiensis Bt407]
gi|228777834|gb|EEM26106.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
thuringiensis Bt407]
gi|228784603|gb|EEM32623.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
thuringiensis serovar thuringiensis str. T01001]
gi|228817487|gb|EEM63572.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
thuringiensis serovar berliner ATCC 10792]
Length = 273
Score = 40.9 bits (93), Expect = 0.18, Method: Composition-based stats.
Identities = 13/73 (17%), Positives = 24/73 (32%)
Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
+Q+ K LT S ++ L + + L E+ EKA L+++
Sbjct: 1 MFQMKKLLLTALISTSIFGLAACGGKDKDEKKLVVGASNVPHAEILEKAKPLLEKKGIEL 60
Query: 76 AYEYFNQCSRDFP 88
+ F
Sbjct: 61 EIKKFQDYVLPNK 73
>gi|81300940|ref|YP_401148.1| soluble lytic transglycosylase [Synechococcus elongatus PCC 7942]
gi|81169821|gb|ABB58161.1| probable soluble lytic transglycosylase [Synechococcus elongatus
PCC 7942]
Length = 690
Score = 40.9 bits (93), Expect = 0.18, Method: Composition-based stats.
Identities = 16/136 (11%), Positives = 39/136 (28%), Gaps = 7/136 (5%)
Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
A +R +++ +I + + + N A
Sbjct: 162 PATIQRWPRYPASNELARQLAKRQPAEAKRWLLQIAQFGRYRFDIDAVLSELQALPNLTA 221
Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
+I Y +R + + Y+ + +E + R + + + AR +
Sbjct: 222 RDRQQIADAYWQRDD-------YATAADLYARSPQTDETLYRQARSLDLSSQPEVARTLY 274
Query: 251 SLIQERYPQGYWARYV 266
+ +R+PQ
Sbjct: 275 QQLLQRFPQSPERERA 290
>gi|317490867|ref|ZP_07949303.1| type IV pilus biogenesis/stability protein PilW [Enterobacteriaceae
bacterium 9_2_54FAA]
gi|316920414|gb|EFV41737.1| type IV pilus biogenesis/stability protein PilW [Enterobacteriaceae
bacterium 9_2_54FAA]
Length = 250
Score = 40.9 bits (93), Expect = 0.19, Method: Composition-based stats.
Identities = 18/249 (7%), Positives = 57/249 (22%), Gaps = 7/249 (2%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + + V L G +V+ R + + +L + + A +
Sbjct: 1 MKLKMRWVVGLLTVSLLAGCSSSKPESQQTATVSQSRL-----QLGLEYLNQGDLKAAQQ 55
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY--ITQYPESKNVDYVYYL 136
+ P + + + Q++ + ++ L
Sbjct: 56 NLEKARDAAPDDYRTQLGMALYQQRVGDNQAAQESYQKAMNLAPQNGTVMNNYGAFLCSL 115
Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196
AQ + + + + + AR + K V +
Sbjct: 116 GQYVPAQQQFSSAANLPDYGQVADSFENAGYCFLKAGQTEEARKLFSRALKSDPDKGVSL 175
Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
++ + ++ + ++ + +
Sbjct: 176 IAEAIREFDQGKRGDARIMLDVYNHILPASANSLWLQIRFAALDGRQTNLERYGKQLARN 235
Query: 257 YPQGYWARY 265
+PQ +
Sbjct: 236 FPQSQQYQQ 244
>gi|254785920|ref|YP_003073349.1| hypothetical protein TERTU_1850 [Teredinibacter turnerae T7901]
gi|237684470|gb|ACR11734.1| TPR repeat domain protein [Teredinibacter turnerae T7901]
Length = 947
Score = 40.9 bits (93), Expect = 0.19, Method: Composition-based stats.
Identities = 16/115 (13%), Positives = 44/115 (38%), Gaps = 1/115 (0%)
Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
+ P ++ + + +++ + + + + ++ + Y K
Sbjct: 36 REPEAPVEKMNHEQVRAEYEELIDLFEDKQLKEQIERRIADVYMMEGVQDSQNSSDYSK- 94
Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
Y+ AI ++ +L Y ++ E + +L +AY EA ++ + R+P
Sbjct: 95 SYYLDAIKSYKEILEKYPNSPDNAEVLYQLAKAYDMEGKQAEALRMLEQLTSRHP 149
Score = 39.0 bits (88), Expect = 0.65, Method: Composition-based stats.
Identities = 26/223 (11%), Positives = 61/223 (27%), Gaps = 16/223 (7%)
Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
+S +++ +Y+ A + E ++A Q + P+ ++
Sbjct: 100 AIKSYKEILEKYPNSPDNAEVLYQLAKAYDMEGKQAEALRMLEQLTSRHPYYPNIGEAYF 159
Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
+ +SA +Y+QA E V+ Y M+ Y Q +
Sbjct: 160 RKGDIYFSAQRYKQAEQAYFAVTQSGAEKFQVNAHY---------MLGWSRYKQHNYRGS 210
Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
L +++ + + + + L + +
Sbjct: 211 LTSYVYVMKNLFGDASDVATLAKPQQSMVKDSLHSMSLALDKLGGAAAIKTVDGLDNA-- 268
Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
+ L + Y+ L E+ + YP+
Sbjct: 269 -----PYVWLLYETLGDFYLEKELYQESADAFKSYVLEYPRSE 306
>gi|229175682|ref|ZP_04303190.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
cereus MM3]
gi|228607823|gb|EEK65137.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
cereus MM3]
Length = 273
Score = 40.9 bits (93), Expect = 0.19, Method: Composition-based stats.
Identities = 18/159 (11%), Positives = 42/159 (26%), Gaps = 3/159 (1%)
Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
+Q+ K LT S ++ L + + L E+ EKA L+++
Sbjct: 1 MFQMKKLLLTALISTSIFGLAACGGKDKDEKKLVVGASNVPHAEILEKAKPLLEKKGIEL 60
Query: 76 AYEYFNQCSRDFP---FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132
+ F + +++ + + + + + Y
Sbjct: 61 EVKKFQDYVLPNKSLADKDLDANYFQHIPYLEKEMKDKKYDFEIAGKIHLEPIGVYSQKY 120
Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
A +I L + I++
Sbjct: 121 KSLKELPDGATIIMSNSVTDHGRGLAILQKEGILKIKDG 159
>gi|154150715|ref|YP_001404333.1| TPR repeat-containing protein [Candidatus Methanoregula boonei 6A8]
gi|153999267|gb|ABS55690.1| TPR repeat-containing protein [Methanoregula boonei 6A8]
Length = 4079
Score = 40.9 bits (93), Expect = 0.19, Method: Composition-based stats.
Identities = 23/204 (11%), Positives = 58/204 (28%), Gaps = 8/204 (3%)
Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
Y + Y + + + +A F + P Q + +A
Sbjct: 173 PEYAKAYYNMGISLYEIGRYDEALGAFEKAHDLDPSDPWVWYYRAFILAKQERYAQAAEA 232
Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
A + + ++ + + + + L S
Sbjct: 233 AGVFLSFEPEHADIWVIQGISLYRLRRLDEAADAFDRAIEQDPLAPDAWLY----KGFSL 288
Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA----EHAEEA 229
+ T ++ A + + Y RG+ + +++ +A++ A +A
Sbjct: 289 FDMERYEDATYALDKAAELSPQTTKIYYTRGKANQRLGKYREAVADFDRALAAEPENADA 348
Query: 230 MARLVEAYVALALMDEAREVVSLI 253
+ + + L+ DE+ V I
Sbjct: 349 LYSRGVSCIHLSRYDESLSVFDRI 372
Score = 39.0 bits (88), Expect = 0.74, Method: Composition-based stats.
Identities = 33/218 (15%), Positives = 61/218 (27%), Gaps = 9/218 (4%)
Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
D + R Y+ + +L + A F P A + + +
Sbjct: 3538 DRKDSRAYYQAGLSYLSLGRYQDAIRNFEATLVQHPSCARAFYAKGRALCGVSMFHEAIT 3597
Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQM---IRDVPYDQRATKLMLQYMSRIVERY 169
+ + YPE+ + + + + L R +
Sbjct: 3598 SFDKALSEQSDYPEAWLYRGIAEANLEEFEEALDCYNHALAQNESYATALLNKGRALIHL 3657
Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
+ A V + + A GR +L R + AI F LA EA
Sbjct: 3658 ERTGEALAAIEKVLTIQPESADAFYYKGRAHLNRRQDDDAIDAFNRALAINRQF---AEA 3714
Query: 230 MARLVEAYVALALMDEAR---EVVSLIQERYPQGYWAR 264
A +EA + I+ YP+ ++ +
Sbjct: 3715 HYYKGTALARKGQYEEAVAAFDAALRIKSDYPEAFYEK 3752
Score = 39.0 bits (88), Expect = 0.80, Method: Composition-based stats.
Identities = 18/211 (8%), Positives = 41/211 (19%), Gaps = 6/211 (2%)
Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
+ + +A F++ FP A ++ + +
Sbjct: 4 SDAEALMRQGTELYDLGRHQEAVVMFDRALTLFPKLPKAHYFKGIALYDLGRYEDALDSY 63
Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD---QRATKLMLQYMSRIVERYTN 171
S + + + +
Sbjct: 64 DHALALDPSDINSWYNKAATLAQIGRNKEALDACDRLIALRFDNAEAWILKGISLYELGR 123
Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231
A + A G G + AI + + + +A
Sbjct: 124 FRDAISAYDHALAIDPTYAKVYYNKGIALADLGRHDEAIAAYGKAVGIVPEY---AKAYY 180
Query: 232 RLVEAYVALALMDEAREVVSLIQERYPQGYW 262
+ + + DEA + P W
Sbjct: 181 NMGISLYEIGRYDEALGAFEKAHDLDPSDPW 211
Score = 38.2 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 22/218 (10%), Positives = 48/218 (22%), Gaps = 9/218 (4%)
Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
+ Y + V + +A + F+ P A + + + +
Sbjct: 3232 KPSDAKTHYYRGVSLAENGQPEEAVKAFDAALEIDPVFSDALFAKGKALLTLGMFREAVK 3291
Query: 113 AASLGEEYITQYPESKNV---DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
Y + +
Sbjct: 3292 TFDKTLLIEKNYAGVYFHKGLALAELGRHDEAITAFDKDIDLDAGNNDAFYHKGVSLAAT 3351
Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
A +V + G G + AI ++ L +A
Sbjct: 3352 GKLTNAMEAFDHVIQADPGSVQGWLHRGMALFDLGRFNDAISSYKKALEIGPT---NADA 3408
Query: 230 MARLVEAYVALALMDEAREVVSL---IQERYPQGYWAR 264
+ +Y AL DEA +Q + + ++ +
Sbjct: 3409 WYLVGRSYYALNTYDEAIAAFDRALDLQGEFAEAWYYK 3446
Score = 36.7 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 27/207 (13%), Positives = 62/207 (29%), Gaps = 10/207 (4%)
Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
+ Y KA E ++ A +++ P + ++ + ++
Sbjct: 3815 QAHYWKARTLYDEGSYDAAITEYDRAIAIKPDRPELYRDRGLAYAAIDQYREAIKSYDKA 3874
Query: 118 EEYITQYPESK-NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
E T ++ + +GM + ++ +L + + Y + +
Sbjct: 3875 LELDTHGADAFSHKGSSLAELGMYRDALEAFEKAIEKDPELATSWFGKGNVLYDLGKFTE 3934
Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE----AMAR 232
Y R E + +RG +A + + + +Y A + A
Sbjct: 3935 ACAAYDEGLRRDP-----ENAVGWTRRGMSLAGLNDHKAAIESYDRALAIDPSFSIAYFT 3989
Query: 233 LVEAYVALALMDEAREVVSLIQERYPQ 259
A+ AL +EA + P
Sbjct: 3990 RGSAFEALGQFEEAEASFRAMISLQPD 4016
Score = 36.3 bits (81), Expect = 4.6, Method: Composition-based stats.
Identities = 28/204 (13%), Positives = 55/204 (26%), Gaps = 10/204 (4%)
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
YEK V + +A F++ A+ + + + + +
Sbjct: 2798 YEKGVALARAGKNDEAVAAFSEAIARDDKKPEAQYEKGRALLELGEDEQAVTSFTRALDL 2857
Query: 121 ITQYPESKNV---DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
T + ++ + + + ER
Sbjct: 2858 DTSFGDAAYYLGLALERVGKFTDAITAYDRMVAARPDHSDAWYHRGIASERLGRDNDAVQ 2917
Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
A GR + + G++ AI F + L E + +A
Sbjct: 2918 AYEKARQIEPHNLPLLFADGRAWARLGQFEDAIHLFDIALGKEPG---NGEILFEKAKAL 2974
Query: 238 VALALMDEAREVVSL----IQERY 257
AL DEA+E+ L + + Y
Sbjct: 2975 AALGRHDEAQEIFRLAFTQLTDNY 2998
Score = 35.5 bits (79), Expect = 8.1, Method: Composition-based stats.
Identities = 28/225 (12%), Positives = 58/225 (25%), Gaps = 10/225 (4%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
D +Y+K + + + + A + F + P A L ++ + +
Sbjct: 782 EIDPDNPVTLYQKGIALAQRERYDDAIKTFERLLTLEPENAQALYYLGIAYAGRQRFDEA 841
Query: 111 QQAASLGEEY-ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
A E + + Y + +
Sbjct: 842 IVAFERSLEIDPKNPLAHHYMGVSLVECDRYDDALRSFSEALLLDASNASTYYYQGIAFL 901
Query: 170 TNSPYVKGARFYVTVGRNQL--AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
+ Y + T R + +G + G + A+ LA
Sbjct: 902 QSHQYEEAIAALNTAIRMDTSLSDAFTYLGISLARLGRHDEAVAALNRSLAANP---SQM 958
Query: 228 EAMARLVEAYVALALMDEAREVV-SLIQERYPQ--GYWARYVETL 269
EA+ E+ + L +A E ++ P W + L
Sbjct: 959 EALVCRGESLMVLQRYADAVETFDRILSLN-PNVISAWMQKGAAL 1002
Score = 35.5 bits (79), Expect = 8.1, Method: Composition-based stats.
Identities = 27/212 (12%), Positives = 59/212 (27%), Gaps = 9/212 (4%)
Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAGVARKSLLMSAFVQYSAGKYQQAASLG 117
Y K + L + +A F+Q P + V + + + +
Sbjct: 1198 AWYNKGKMLLDLGKYQEALAAFDQALEREPAYTEVFYSRGVALSKLGRFPEAIEAFERNL 1257
Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
E+ + P +G + + L Y + + + +
Sbjct: 1258 EKDTSNAPGYYFKGIALSKLGRYQEALDAFDRALVYDPENALVYFQKGRALDGLNRFQEA 1317
Query: 178 ARFYVTV--GRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
+ + + + + G G Y AI F +A H A +
Sbjct: 1318 VAAFEKTLALKPRYSEARMRKGISLYNLGRYADAIRDFDRTIAENPHNFH---AWYQKGR 1374
Query: 236 AYVALALMDEAREVVSL---IQERYPQGYWAR 264
A EA + ++ YP+ ++ +
Sbjct: 1375 ALFDSGSYTEAIDAYDRALEVESSYPEAHYHK 1406
>gi|291563222|emb|CBL42038.1| ChAPs (Chs5p-Arf1p-binding proteins) [butyrate-producing bacterium
SS3/4]
Length = 627
Score = 40.9 bits (93), Expect = 0.19, Method: Composition-based stats.
Identities = 33/239 (13%), Positives = 60/239 (25%), Gaps = 15/239 (6%)
Query: 28 FSIAVCFLVGWERQSSRDVYLDSVTDVRYQ-----REVYEKAVLFLKEQNFSKAYEYFNQ 82
F I +V +D ++ T +Y++ ++ E+++ A E +
Sbjct: 5 FLIMATAVVLCSACGKKDASVNDATQAAQASSTEAENLYKEGSQYVGEEDYESAIESLLK 64
Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
C P A L + + G E K D +
Sbjct: 65 CIELDPDYSKAYIQLSKAYIGNEEYDEAMSILQQGYEKTKDTSLEKEQDNCVRTICQVLT 124
Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYT-NSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
KL + Y + V Q A + + L
Sbjct: 125 DNEDYETAIPWLLKLQELDGVTVENSLQLAEAYSMMDDYENAVSVLQKADQNDASIKNAL 184
Query: 202 KRGEYVAAIPRFQLVLAN---------YSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
+ + +A EA + L+ YV + EA +V
Sbjct: 185 LEARVAYGQYCYDEGKNDQAIETLKAVIDEAPDRIEAYSMLIGVYVDAGKVKEAESIVQ 243
>gi|197334399|ref|YP_002155384.1| type IV pilus biogenesis/stability protein PilW [Vibrio fischeri
MJ11]
gi|197315889|gb|ACH65336.1| type IV pilus biogenesis/stability protein PilW [Vibrio fischeri
MJ11]
Length = 256
Score = 40.9 bits (93), Expect = 0.19, Method: Composition-based stats.
Identities = 22/250 (8%), Positives = 58/250 (23%), Gaps = 9/250 (3%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
+ +I + G D + + + +L + KA E
Sbjct: 1 MRKWSAALLTIGLLTSAGCVTVDEADEMTKEEVIRAAEARI-TLGLSYLNAGDMMKAREN 59
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY----- 134
+ P ++ SL ++A Y ++ N V+
Sbjct: 60 LELAVQYAPDYYRSQTSLAYYYQQVEEDDLAEKAYKRALRYSSKNGNVLNNYGVFLCKKG 119
Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
+ + + K +
Sbjct: 120 RYEEAQEKFTQAIEQPYYYLVSASYENAAMCALSSGDKVTAKTYFERSLAHDPNRIRSTL 179
Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
++ + + G Y Y + +++ L+E ++ +++
Sbjct: 180 QLAKLNIDEGNYSEPRISLFKFNKKY---GYKPVSLSLLIELEKKAGNAHLVKKYANILG 236
Query: 255 ERYPQGYWAR 264
+ YP +
Sbjct: 237 KEYPDSREYQ 246
>gi|104783065|ref|YP_609563.1| hypothetical protein PSEEN4085 [Pseudomonas entomophila L48]
gi|95112052|emb|CAK16779.1| conserved hypothetical protein [Pseudomonas entomophila L48]
Length = 269
Score = 40.9 bits (93), Expect = 0.19, Method: Composition-based stats.
Identities = 17/111 (15%), Positives = 39/111 (35%), Gaps = 1/111 (0%)
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI-GRYYLKRGEYVAAIPRFQLVLANY 220
I ++ + A F +Q A G L +G+ A F V Y
Sbjct: 157 FDLIKQKDFDKASQAFAAFLRKYPNSQYAGNAQYWLGEVNLAKGDLQGAGQAFAKVSQLY 216
Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+++ +L + + D+ + ++ + +YP A+ + ++
Sbjct: 217 PQHSKVPDSLYKLADVERRMGHTDKVKGILQQVITQYPGTSAAQLAQRDLQ 267
Score = 37.5 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 19/83 (22%), Positives = 32/83 (38%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
D ++ YE A +K+++F KA + F R +P + A + V + G
Sbjct: 142 EPGDPAKEKLFYEAAFDLIKQKDFDKASQAFAAFLRKYPNSQYAGNAQYWLGEVNLAKGD 201
Query: 110 YQQAASLGEEYITQYPESKNVDY 132
Q A + YP+ V
Sbjct: 202 LQGAGQAFAKVSQLYPQHSKVPD 224
>gi|145219966|ref|YP_001130675.1| tetratricopeptide domain-containing protein [Prosthecochloris
vibrioformis DSM 265]
gi|145206130|gb|ABP37173.1| Tetratricopeptide domain protein [Chlorobium phaeovibrioides DSM
265]
Length = 269
Score = 40.9 bits (93), Expect = 0.19, Method: Composition-based stats.
Identities = 15/78 (19%), Positives = 29/78 (37%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ I + Y AI +Q+V+A Y+ + A+ + A+ L A+
Sbjct: 191 QFFIAESWFAEKVYDKAILDYQVVIAKYTKSNKRPAALFKQARAFELLGDGANAKTRYRD 250
Query: 253 IQERYPQGYWARYVETLV 270
+ YP+ A +
Sbjct: 251 LVNVYPKSPEADLARKKM 268
>gi|323496602|ref|ZP_08101655.1| hypothetical protein VISI1226_13321 [Vibrio sinaloensis DSM 21326]
gi|323318348|gb|EGA71306.1| hypothetical protein VISI1226_13321 [Vibrio sinaloensis DSM 21326]
Length = 260
Score = 40.9 bits (93), Expect = 0.19, Method: Composition-based stats.
Identities = 9/93 (9%), Positives = 27/93 (29%)
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
+F + + + + +Y + +A+ +L +
Sbjct: 167 QFQKDYPDSSFTPNSHYWLGQLYFAKKQDKEAVKSFAAVVSYKKSNKRADALVKLGDIAG 226
Query: 239 ALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+A + + + YP A+ + +K
Sbjct: 227 RNNNAAQANKYYQQVLDEYPSSASAKLAQERIK 259
Score = 37.9 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 30/79 (37%), Gaps = 3/79 (3%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
LK+ +Y AI FQ +Y D+ + L + Y A EA + +
Sbjct: 145 YQNAVDLILKKRDYTGAIAAFQQFQKDYPDSSFTPNSHYWLGQLYFAKKQDKEAVKSFAA 204
Query: 253 IQERYPQGYWARYVETLVK 271
+ Y + + + LVK
Sbjct: 205 VVS-YKKSN--KRADALVK 220
>gi|15639253|ref|NP_218702.1| catabolite gene activator, putative [Treponema pallidum subsp.
pallidum str. Nichols]
gi|189025495|ref|YP_001933267.1| catabolite gene activator [Treponema pallidum subsp. pallidum SS14]
gi|3322532|gb|AAC65248.1| catabolite gene activator, putative [Treponema pallidum subsp.
pallidum str. Nichols]
gi|189018070|gb|ACD70688.1| possible catabolite gene activator [Treponema pallidum subsp.
pallidum SS14]
gi|291059665|gb|ADD72400.1| cyclic nucleotide-binding protein [Treponema pallidum subsp.
pallidum str. Chicago]
Length = 347
Score = 40.9 bits (93), Expect = 0.19, Method: Composition-based stats.
Identities = 24/216 (11%), Positives = 54/216 (25%), Gaps = 17/216 (7%)
Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
+ LDS + + +Y A F +++ A + + +P
Sbjct: 131 ESLLDSQEETNNEEGLYTVARAFHASEHYLAASQVAQRYRELYPDGKHRHDIAS--MLES 188
Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
+ G + E + + ++ Q ++
Sbjct: 189 ADGTVGRGFEEAGAQGSDAGFEVPSAFAESAVDSEVGDLRAAELLEQQGKWGEAYEHYRL 248
Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
A + GR ++ E+V +I F + +
Sbjct: 249 GCASNGGVG---------------AEAAYLGAGRCLFEQREFVRSIQTFTECITRNPKST 293
Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
E + L + Y + D+A P+
Sbjct: 294 RLAEVLMYLGQCYQGMGRPDKAISFYDKALSTAPES 329
>gi|332305766|ref|YP_004433617.1| tol-pal system protein YbgF [Glaciecola agarilytica 4H-3-7+YE-5]
gi|332173095|gb|AEE22349.1| tol-pal system protein YbgF [Glaciecola agarilytica 4H-3-7+YE-5]
Length = 250
Score = 40.9 bits (93), Expect = 0.19, Method: Composition-based stats.
Identities = 17/116 (14%), Positives = 41/116 (35%), Gaps = 14/116 (12%)
Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
+ ++ Y NS Y A +++ G+ + ++ AA +F
Sbjct: 145 YDDAIPEFQSFLQNYPNSSYASNAHYWL--------------GQLLFNKQDWAAAANQFD 190
Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
++ + D+ +AM +L + + A ++ + YP + E +
Sbjct: 191 TLITQFPDSSKRADAMLKLGICEQERSNIARAEQLWKKVVAEYPNSSARKLAEIKL 246
Score = 40.5 bits (92), Expect = 0.25, Method: Composition-based stats.
Identities = 16/70 (22%), Positives = 28/70 (40%), Gaps = 2/70 (2%)
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
K Y AIP FQ L NY ++ +A A L + A + ++P
Sbjct: 141 KDKLYDDAIPEFQSFLQNYPNSSYASNAHYWLGQLLFNKQDWAAAANQFDTLITQFPDS- 199
Query: 262 WARYVETLVK 271
++ + ++K
Sbjct: 200 -SKRADAMLK 208
>gi|229592293|ref|YP_002874412.1| hypothetical protein PFLU4906 [Pseudomonas fluorescens SBW25]
gi|229364159|emb|CAY51806.1| putative exported protein [Pseudomonas fluorescens SBW25]
Length = 278
Score = 40.9 bits (93), Expect = 0.19, Method: Composition-based stats.
Identities = 17/111 (15%), Positives = 37/111 (33%), Gaps = 1/111 (0%)
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI-GRYYLKRGEYVAAIPRFQLVLANY 220
I + + F +Q A G L +G+ A F V Y
Sbjct: 166 FDLIKAKDFDRASQAFTAFLRKYPNSQYAGNAQYWLGEVNLAKGDLQGAGQAFAKVSQLY 225
Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+++ +L + L D+ + ++ + +YP A+ + ++
Sbjct: 226 PKHAKVPDSLYKLADVERRLGHTDKVKGILQQVVAQYPGTSAAQLAQRDLQ 276
Score = 37.5 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 17/83 (20%), Positives = 31/83 (37%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
D ++ Y+ A +K ++F +A + F R +P + A + V + G
Sbjct: 151 EPGDPAKEKLYYDAAFDLIKAKDFDRASQAFTAFLRKYPNSQYAGNAQYWLGEVNLAKGD 210
Query: 110 YQQAASLGEEYITQYPESKNVDY 132
Q A + YP+ V
Sbjct: 211 LQGAGQAFAKVSQLYPKHAKVPD 233
Score = 37.5 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 13/67 (19%), Positives = 28/67 (41%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ +K ++ A F L Y ++++A A L E +A + A + +
Sbjct: 161 YYDAAFDLIKAKDFDRASQAFTAFLRKYPNSQYAGNAQYWLGEVNLAKGDLQGAGQAFAK 220
Query: 253 IQERYPQ 259
+ + YP+
Sbjct: 221 VSQLYPK 227
>gi|282164220|ref|YP_003356605.1| hypothetical protein MCP_1550 [Methanocella paludicola SANAE]
gi|282156534|dbj|BAI61622.1| hypothetical protein [Methanocella paludicola SANAE]
Length = 1006
Score = 40.9 bits (93), Expect = 0.20, Method: Composition-based stats.
Identities = 25/225 (11%), Positives = 60/225 (26%), Gaps = 9/225 (4%)
Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
++ D Y Y V+ K+ +A + F + R A +L +S
Sbjct: 160 KEFKDALRIDPDYPEVHYNMGVVLGKKGMLDEAIKEFREAIRLKADDAEAHYNLGVSLDY 219
Query: 104 QYSAGKYQQAASLGEEYITQYPESKNV---DYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
+ + + E+ + R+ +
Sbjct: 220 KGLVDEAIREFREAVWLKPDDAEAHYNLGLALSKKGQYDQAIREYREAVRLKPDYAKAHN 279
Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220
+ +++ + R +G R A F+ +
Sbjct: 280 NLGILLDYRGQLDEAIKEYYAAVRLRPDDPEAHYNLGVALASRNALDEAAQEFRDAVKLR 339
Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSL---IQERYPQGYW 262
EA +L + ++DEA + + ++ Y + ++
Sbjct: 340 PGY---AEAHYKLGYVFCRKGMLDEAVKELREAIWLRPNYSEAHY 381
Score = 39.8 bits (90), Expect = 0.46, Method: Composition-based stats.
Identities = 26/202 (12%), Positives = 51/202 (25%), Gaps = 6/202 (2%)
Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
Y + K+ + +A + + R P A +L + + + +
Sbjct: 237 KPDDAEAHYNLGLALSKKGQYDQAIREYREAVRLKPDYAKAHNNLGILLDYRGQLDEAIK 296
Query: 113 AASLGEEYITQYPESKNV---DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
PE+ AQ RD + + + R
Sbjct: 297 EYYAAVRLRPDDPEAHYNLGVALASRNALDEAAQEFRDAVKLRPGYAEAHYKLGYVFCRK 356
Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
R + +G + K+ AI + + + EA
Sbjct: 357 GMLDEAVKELREAIWLRPNYSEAHYNLGVVFGKKDLMDDAIRELKDAIRLRPEY---AEA 413
Query: 230 MARLVEAYVALALMDEAREVVS 251
L A+ L+D+A
Sbjct: 414 HYNLGLAFDYKGLLDDAIREYR 435
>gi|163783159|ref|ZP_02178153.1| hypothetical protein HG1285_14084 [Hydrogenivirga sp. 128-5-R1-1]
gi|159881493|gb|EDP75003.1| hypothetical protein HG1285_14084 [Hydrogenivirga sp. 128-5-R1-1]
Length = 341
Score = 40.9 bits (93), Expect = 0.20, Method: Composition-based stats.
Identities = 29/231 (12%), Positives = 67/231 (29%), Gaps = 9/231 (3%)
Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA---- 101
T R +Y+ + +N+S+A + ++ P + +L M+
Sbjct: 17 SAKQEQTKESEWRHLYDLGMSAYYARNYSEAIARLYRAAKIAPKEPLIWNALGMTYMEVE 76
Query: 102 -FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
+ + + AS ++ + +
Sbjct: 77 EYKKAEEAFKRALASNPNHAESKMNLGILYLRMKDYRRAIKFLQEALSDETFDKKHIAFY 136
Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220
Y++R+ + T ++E+G Y+ Y A ++ ++AN
Sbjct: 137 YLARVYRELGDRKKYLEYLKKATAYNPMFLDAQLELGSAYMDDKRYEEAERLYKSLIANN 196
Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP-QGYWARYVETLV 270
+ L + Y ++A+E V L+ E L+
Sbjct: 197 FKTP---DIYLSLAKVYYETGDYEKAKETVKLVLENKQANNLQRTQAYELL 244
>gi|330444094|ref|YP_004377080.1| TPR domain-containing protein [Chlamydophila pecorum E58]
gi|328807204|gb|AEB41377.1| TPR domain protein [Chlamydophila pecorum E58]
Length = 329
Score = 40.9 bits (93), Expect = 0.20, Method: Composition-based stats.
Identities = 27/228 (11%), Positives = 70/228 (30%), Gaps = 11/228 (4%)
Query: 23 ALTIFFSIAVCFLVGWERQSSR------DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76
I + + +G + + T E + + +FL+ Q++ +A
Sbjct: 14 KSFISLLLFLFINIGCYARPISFEPFLGKLSSQKFTPKYSAEEYFSQGQVFLERQHYRRA 73
Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
F S FP + ++L + + G+ A Y+ Q + +
Sbjct: 74 LLCFGMISHHFPSHTLHSQALFFTGKCYFELGQPDLADKAFAIYLQQPDAEYSEELFSIK 133
Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196
++ + + L+ ++ ++ + ++ A
Sbjct: 134 YAIAESFAHGKRKHLFL-----LEGFPKLGNADEDALRIYDEVLTAFPNQDLGAQALYSK 188
Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244
+ + + AI + + + + +A RL E Y+ A +
Sbjct: 189 ADLLIVKKDLAEAIKILKKLTLQFPFHSLSPKAFVRLSEIYLQQAQKE 236
Score = 36.3 bits (81), Expect = 4.1, Method: Composition-based stats.
Identities = 13/83 (15%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
A + G+ +L+R Y A+ F ++ ++ +A+ + Y L D A
Sbjct: 51 KYSAEEYFSQGQVFLERQHYRRALLCFGMISHHFPSHTLHSQALFFTGKCYFELGQPDLA 110
Query: 247 REVVSLIQERYPQGYWARYVETL 269
+ ++ ++ P ++ + ++
Sbjct: 111 DKAFAIYLQQ-PDAEYSEELFSI 132
>gi|198274320|ref|ZP_03206852.1| hypothetical protein BACPLE_00464 [Bacteroides plebeius DSM 17135]
gi|198272810|gb|EDY97079.1| hypothetical protein BACPLE_00464 [Bacteroides plebeius DSM 17135]
Length = 594
Score = 40.9 bits (93), Expect = 0.20, Method: Composition-based stats.
Identities = 32/247 (12%), Positives = 65/247 (26%), Gaps = 10/247 (4%)
Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE----------KAVLFLKEQN 72
+ V L + ++ + YE +AV ++ +
Sbjct: 2 KKLLGIIGMVFLLFACGTTGKQHSAKRNLANEERDTLSYEQRRKYNYFFLEAVRLKQKGD 61
Query: 73 FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132
+ A+E + C +P + A + V K ++A K
Sbjct: 62 YDAAFELYKHCLDIYPGSAPALYEISQFYMVLGQEQKGEEALKKAVHSDESNFWYKQTLA 121
Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
YY +A+ I L+ + +V+ Y + +
Sbjct: 122 AYYQRKRDWAKAIAVYDDMAHQFPSRLEPLMALVDLYNQTKSYSQVVSVLNRLEELDGKS 181
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
E + F + + + + L + Y+ DEA V
Sbjct: 182 EQISMEKFRMYLLLDNQEQAFNEIESLSKEYPYDLRYQTILGDVYLNNDKPDEAYAVYQR 241
Query: 253 IQERYPQ 259
I + P
Sbjct: 242 ILKEEPG 248
>gi|149067050|gb|EDM16783.1| transmembrane and tetratricopeptide repeat containing 2 (predicted)
[Rattus norvegicus]
Length = 719
Score = 40.9 bits (93), Expect = 0.20, Method: Composition-based stats.
Identities = 20/225 (8%), Positives = 56/225 (24%), Gaps = 8/225 (3%)
Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
++ +Y L+ ++ + +A + + + P +
Sbjct: 470 CSEIPDENLKDPHAHKSSVTSCLYNLGKLYHEQGRYEEALSVYREAIQKMPRQFAPQSLY 529
Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
M K +A E + + Y + + + +A +
Sbjct: 530 NMMGEAYMRLSKLPEAEHWYMESLRSKTDHIPAHLTYGKLLALTGRKSEAEKFFLKAIE- 588
Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
L + ++ +R + AA+ + ++
Sbjct: 589 -LDPTKGNCYMHYGQFLLEESRLTEAAEMAKKAAELDSTEFDVVFNAAHMLRQASLNEAA 647
Query: 218 ANYSD-----AEHAEEAMARLVEAYVALALMDEAR-EVVSLIQER 256
Y D + A+ L + +A + +Q +
Sbjct: 648 EKYYDLAARLRPNYPAALMNLGAILHLNGRLQKAEANYLRALQLK 692
>gi|294140563|ref|YP_003556541.1| hypothetical protein SVI_1792 [Shewanella violacea DSS12]
gi|293327032|dbj|BAJ01763.1| conserved hypothetical protein [Shewanella violacea DSS12]
Length = 246
Score = 40.9 bits (93), Expect = 0.20, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 33/79 (41%), Gaps = 2/79 (2%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
LK+ +Y AIP F+ + Y D+ +A A L + + + A++
Sbjct: 129 YEYAVNLVLKQRKYDEAIPAFRGFIKKYPDSTYAANANYWLGQLLYNKSEFESAKKAFDT 188
Query: 253 IQERYPQGYWARYVETLVK 271
+ R+ + ++LVK
Sbjct: 189 VVNRFKDSN--KRADSLVK 205
>gi|116253707|ref|YP_769545.1| hypothetical protein RL3967 [Rhizobium leguminosarum bv. viciae
3841]
gi|115258355|emb|CAK09457.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 328
Score = 40.9 bits (93), Expect = 0.20, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 31/79 (39%), Gaps = 2/79 (2%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ + ++ G+Y A F + Y + A +A L EA + +EA +
Sbjct: 207 QYKAAYGHVLSGDYSTAELEFTQYITRYPSSARAADANFWLGEALYSQGKYNEAAKTFLN 266
Query: 253 IQERYPQGYWARYVETLVK 271
++Y + E L+K
Sbjct: 267 AHQKYGTSE--KAPEMLLK 283
Score = 37.9 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 17/76 (22%), Positives = 30/76 (39%)
Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243
+ A +G +G+Y A F Y +E A E + +L + AL
Sbjct: 235 PSSARAADANFWLGEALYSQGKYNEAAKTFLNAHQKYGTSEKAPEMLLKLGMSLAALDNN 294
Query: 244 DEAREVVSLIQERYPQ 259
+ A + + +RYP+
Sbjct: 295 ETACATLREVSKRYPK 310
>gi|325287187|ref|YP_004262977.1| hypothetical protein Celly_2286 [Cellulophaga lytica DSM 7489]
gi|324322641|gb|ADY30106.1| Tetratricopeptide TPR_1 repeat-containing protein [Cellulophaga
lytica DSM 7489]
Length = 995
Score = 40.9 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 26/232 (11%), Positives = 58/232 (25%), Gaps = 16/232 (6%)
Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
+ + + YQ+ + + V EQ++ A E FN + ++ A
Sbjct: 401 EKNKNYASKETYQKVAFYRGVELFLEQDYESALEAFNLSLDNAEEPKFKARANFWKAESL 460
Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL------- 157
Y K+ A + + ++Y + + +
Sbjct: 461 YLLNKFDDALVSFVAFQQNPMSVSTDENKELDYNLAYTYFKLNDYVNATSYYKKYTDSRP 520
Query: 158 --------MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR-GEYVA 208
+ + R G+
Sbjct: 521 EDEAKLNDAYLRLGDCYFVTSKYWPAIETYNIALKNRGGQKDYAAYQRALSYGFVGKSDT 580
Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
I + + YS + ++A+ L Y+ L D + + + E Y
Sbjct: 581 KISELKSFVTKYSKSTLKDDALYELGNTYIKLGNEDLGLQAYNKLIEEYKGS 632
Score = 35.9 bits (80), Expect = 5.3, Method: Composition-based stats.
Identities = 30/247 (12%), Positives = 67/247 (27%), Gaps = 10/247 (4%)
Query: 34 FLVGWERQSSRDVYLDSVTDVRY--QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91
L ++ + YL+ VT+ + Y + ++ N+ +A E F+Q +
Sbjct: 137 ALFSSKKYKDAERYLNRVTNSATYGSQAKYYLGYIAYEQDNYQEANERFDQITDQDELKE 196
Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151
F + K A + S+ +
Sbjct: 197 KLSYYQADMNFKLGNFEKAIALAKEQLPKADRNEVSELNKIIGESYFNLKQYNNAIPYLT 256
Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
+ K + + + N + Y E +
Sbjct: 257 EYKGKRGKWSNTDYYLLGYSYYKQGDYANGIDQFNNIIDGDNSVSQNAYYHLAECYLKLD 316
Query: 212 RFQLVLANYSDAEHAEEAMARLVEAY-------VALAL-MDEAREVVSLIQERYPQGYWA 263
+ Q L + +A + + +AY + + V++ E YP A
Sbjct: 317 KKQEALNAFKNASQMDYSEEIKKDAYLNYARLSYEIGNAYEPVPSVLTKYLETYPDSEHA 376
Query: 264 RYVETLV 270
+ ++ L+
Sbjct: 377 KEIQELL 383
>gi|188584570|ref|YP_001928015.1| tol-pal system protein YbgF [Methylobacterium populi BJ001]
gi|179348068|gb|ACB83480.1| tol-pal system protein YbgF [Methylobacterium populi BJ001]
Length = 339
Score = 40.9 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 17/108 (15%), Positives = 37/108 (34%), Gaps = 5/108 (4%)
Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL-----AAKEVEIGRYYLKRGEYVAAIP 211
Y + ++ +G YL+R A
Sbjct: 212 DAQADFEAAYALIRERQYEQAEMSLRQFIQSHPRDRLVPKATFWLGESYLQRNRSREAAE 271
Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
+F V +++++ A EAM +L + AL +A ++ ++ ++P
Sbjct: 272 QFLKVSTDFANSPVAPEAMLKLGASLHALGAKAQACATLAEVERKFPS 319
Score = 37.5 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 12/78 (15%), Positives = 25/78 (32%)
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
A + E ++ +Y A + + ++ +A L E+Y+ EA E
Sbjct: 212 DAQADFEAAYALIRERQYEQAEMSLRQFIQSHPRDRLVPKATFWLGESYLQRNRSREAAE 271
Query: 249 VVSLIQERYPQGYWARYV 266
+ + A
Sbjct: 272 QFLKVSTDFANSPVAPEA 289
>gi|73993539|ref|XP_534539.2| PREDICTED: similar to Tetratricopeptide repeat protein 10 (TPR
repeat protein 10) (Recessive polycystic kidney disease
protein Tg737) (TgN(Imorpk)737Rpw) [Canis familiaris]
Length = 825
Score = 40.9 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 20/212 (9%), Positives = 48/212 (22%), Gaps = 6/212 (2%)
Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD---FPFAGVARKSLLMSAFVQYSAG 108
+D + K ++ KA E++ + R+ A A
Sbjct: 480 SDRYNPSALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYKRLNRLDEAL 539
Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
Q Y + + + L + + +
Sbjct: 540 DCFLKLHTILRNSAQVLYQIANVYELMEDPHQAIEWLMQLISVVPTDSRALSKLGELYDS 599
Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
+ + +G YY+ AI F+ + +
Sbjct: 600 EGDKSQAFQYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAIQYFERASLIQPVSLKWK- 658
Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQG 260
+ + +A + I ++P+
Sbjct: 659 --LMVASCFRRSGNYQKALDTYKDIHRKFPEN 688
Score = 37.9 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 23/203 (11%), Positives = 59/203 (29%), Gaps = 7/203 (3%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
KA+ +L++++F++A E + A + L + + + +
Sbjct: 421 NKAITYLRQKDFNQAVETLKMFEKKDSRVKSAAATNLSFLYYLENEFAQASSYADLAVNS 480
Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVP----YDQRATKLMLQYMSRIVERYTNSPYVKG 177
+Y S + + + + + + L + +R
Sbjct: 481 DRYNPSALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYKRLNRLDEALD 540
Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
+ A +I Y + AI +++ A+++L E Y
Sbjct: 541 CFLKLHTILRNSAQVLYQIANVYELMEDPHQAIEWLMQLISVVPTDS---RALSKLGELY 597
Query: 238 VALALMDEAREVVSLIQERYPQG 260
+ +A + +P
Sbjct: 598 DSEGDKSQAFQYYYESYRYFPSN 620
>gi|217032338|ref|ZP_03437834.1| hypothetical protein HPB128_132g36 [Helicobacter pylori B128]
gi|216946004|gb|EEC24618.1| hypothetical protein HPB128_132g36 [Helicobacter pylori B128]
Length = 791
Score = 40.9 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 9/53 (16%), Positives = 17/53 (32%)
Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
NY + EA+ + +A +A I Y +A + +
Sbjct: 250 KNYPTDPNIPEALYYVAKALDENNNYKQAMRYYKRILLEYKNSRYAPLAQMRL 302
>gi|260772529|ref|ZP_05881445.1| TPR repeat-containing protein [Vibrio metschnikovii CIP 69.14]
gi|260611668|gb|EEX36871.1| TPR repeat-containing protein [Vibrio metschnikovii CIP 69.14]
Length = 259
Score = 40.9 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 29/92 (31%)
Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
F + AA + + +YSD+ +A+ +L +
Sbjct: 168 FQADYPDSSFAANAHYWLGQLHFAKRQDQQSAKSFAAVLSYSDSNKRADALVKLGDIAAR 227
Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+A++ + YP A+ + +K
Sbjct: 228 NNNAAQAKKYYQQVINEYPNSASAKAAQDKLK 259
Score = 36.3 bits (81), Expect = 4.9, Method: Composition-based stats.
Identities = 18/98 (18%), Positives = 32/98 (32%), Gaps = 5/98 (5%)
Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234
A LK+ +Y AI F+ A+Y D+ A A L
Sbjct: 127 NDELPLGTFSSDVNEQAAYQNAVDLILKKRDYAGAIAAFEKFQADYPDSSFAANAHYWLG 186
Query: 235 EAYVALALMDE-AREVVSLIQERYPQGYWARYVETLVK 271
+ + A + A+ +++ + + LVK
Sbjct: 187 QLHFAKRQDQQSAKSFAAVLSY----SDSNKRADALVK 220
>gi|86748939|ref|YP_485435.1| hypothetical protein RPB_1816 [Rhodopseudomonas palustris HaA2]
gi|86571967|gb|ABD06524.1| conserved hypothetical protein [Rhodopseudomonas palustris HaA2]
Length = 321
Score = 40.9 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 35/97 (36%), Gaps = 3/97 (3%)
Query: 166 VERYTNSPYVKGARFYVTVGRNQLA---AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
+ + + A + +G + +R Y A F V + Y
Sbjct: 207 YMQRRDYALAEETMRNFASKYPNDALTPDSQYWLGESFFQRQMYRDAAEAFLAVTSKYDK 266
Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
+ A +A+ RL ++ AL + A + I +YP+
Sbjct: 267 SAKAPDALLRLGQSLSALKEKEAACAALGEIGRKYPK 303
>gi|315917695|ref|ZP_07913935.1| conserved hypothetical protein [Fusobacterium gonidiaformans ATCC
25563]
gi|317059219|ref|ZP_07923704.1| conserved hypothetical protein [Fusobacterium sp. 3_1_5R]
gi|313684895|gb|EFS21730.1| conserved hypothetical protein [Fusobacterium sp. 3_1_5R]
gi|313691570|gb|EFS28405.1| conserved hypothetical protein [Fusobacterium gonidiaformans ATCC
25563]
Length = 407
Score = 40.9 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 25/54 (46%)
Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
+ + + +E E +L AY L E ++ ++L++ERY W + +
Sbjct: 345 KSLSHKGNSSERRAETYYKLASAYNKLGEKREYKKYLTLLKERYANSLWGKKAQ 398
>gi|289209659|ref|YP_003461725.1| PEP-CTERM system TPR-repeat lipoprotein [Thioalkalivibrio sp.
K90mix]
gi|288945290|gb|ADC72989.1| PEP-CTERM system TPR-repeat lipoprotein [Thioalkalivibrio sp.
K90mix]
Length = 935
Score = 40.9 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 20/239 (8%), Positives = 58/239 (24%), Gaps = 5/239 (2%)
Query: 36 VGWERQSSRDVYLDSVTDVRYQRE---VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV 92
+ + + R + ++A + KA E + +
Sbjct: 697 LSLAGEVDEARQVFEPVVERAPEAAQVIAQQAWFDAQAGELEKAIEGYERALGRESRRDW 756
Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
+ +S + +E+ + G + +
Sbjct: 757 LVEKYQAQQRAGHSEAALETLKGWLQEHPEDAASRHLLGSAQINAGHEAEALDTYETVLE 816
Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
+ ++ + V ++ E
Sbjct: 817 QRPNDVIALNNAAWLARETDNPRAREYARRAVELAPDQPAILDTLGVV--LLEGGDTESA 874
Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+ + Y + A + L +AY A ++AR +++ + E + ++L +
Sbjct: 875 LETLQRAYRMSPQAPDIGFHLAQAYQASGETEQARALLTELLEAHEDFPERERAQSLRE 933
>gi|146300002|ref|YP_001194593.1| TPR repeat-containing protein [Flavobacterium johnsoniae UW101]
gi|146154420|gb|ABQ05274.1| Tetratricopeptide TPR_2 repeat protein [Flavobacterium johnsoniae
UW101]
Length = 1004
Score = 40.9 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 28/238 (11%), Positives = 66/238 (27%), Gaps = 16/238 (6%)
Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
+ + YQ+ ++ + V E N+++A + F + + ++ A +
Sbjct: 413 EKNRTAENKAAYQKVLFYRGVELYNELNYTEAGKMFKSAASEQKTPEFTARATFWKAETE 472
Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
Y Q A +++ +Y + Y + ++
Sbjct: 473 YLNDDMQNALLTYKQFAGLPAAKSTDEYKNINYNIGYTYFKLKEYDQAANSFQAQIDNNK 532
Query: 165 IVERYTNSPY----------------VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
+ N Y ++ + + + Y +
Sbjct: 533 EDKVRLNDSYLRLGDSRFVNSKYTQAMEAYGKAMDGKSVDADYAQFQKALSYGFMSKNDQ 592
Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
I L Y +E+ ++ + L YVA D A + + Y G +
Sbjct: 593 KISELNNFLKMYKKSEYRDDVLFELGNTYVADKKNDLAIKTYDQLISEYKNGSFTSKS 650
>gi|330811385|ref|YP_004355847.1| hypothetical protein PSEBR_c2g93 [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327379493|gb|AEA70843.1| Conserved hypothetical protein; putative exported protein
[Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
Length = 279
Score = 40.5 bits (92), Expect = 0.21, Method: Composition-based stats.
Identities = 18/111 (16%), Positives = 38/111 (34%), Gaps = 1/111 (0%)
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI-GRYYLKRGEYVAAIPRFQLVLANY 220
I + + A F +Q A G L +G+ A F V Y
Sbjct: 167 FDLIKAKDFDKASQAFAAFLRKYPNSQYAGNAQYWLGEVNLAKGDLQGAGQAFAKVSQLY 226
Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+++ +L + L D+ + ++ + +YP A+ + ++
Sbjct: 227 PKHAKVPDSLYKLADVERRLGHTDKVKGILQQVVAQYPGTSAAQLAQRDLQ 277
Score = 36.7 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 13/67 (19%), Positives = 28/67 (41%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ +K ++ A F L Y ++++A A L E +A + A + +
Sbjct: 162 YYDAAFDLIKAKDFDKASQAFAAFLRKYPNSQYAGNAQYWLGEVNLAKGDLQGAGQAFAK 221
Query: 253 IQERYPQ 259
+ + YP+
Sbjct: 222 VSQLYPK 228
Score = 36.3 bits (81), Expect = 5.2, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 31/80 (38%)
Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
D ++ Y+ A +K ++F KA + F R +P + A + V + G Q
Sbjct: 155 DPAKEKLYYDAAFDLIKAKDFDKASQAFAAFLRKYPNSQYAGNAQYWLGEVNLAKGDLQG 214
Query: 113 AASLGEEYITQYPESKNVDY 132
A + YP+ V
Sbjct: 215 AGQAFAKVSQLYPKHAKVPD 234
>gi|163784310|ref|ZP_02179219.1| hypothetical protein HG1285_06948 [Hydrogenivirga sp. 128-5-R1-1]
gi|159880420|gb|EDP74015.1| hypothetical protein HG1285_06948 [Hydrogenivirga sp. 128-5-R1-1]
Length = 687
Score = 40.5 bits (92), Expect = 0.22, Method: Composition-based stats.
Identities = 39/277 (14%), Positives = 85/277 (30%), Gaps = 23/277 (8%)
Query: 5 LGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKA 64
L + + ++ LYK+A IF + + D Y V E Y +A
Sbjct: 365 LLKKLIAITSYNLGLYKYAYNIF------------KNINEDKYYLYTAFVLLNLENYSEA 412
Query: 65 VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY 124
+LK+ + + E Q S + + + + +
Sbjct: 413 EFYLKKAYKNASDEKIKQSSLKYLADIYYFNNDDTKFIATLRQIAKFDSKFASDMLGWYF 472
Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYD----------QRATKLMLQYMSRIVERYTNSPY 174
K + Y +Y + + D + + + + + N
Sbjct: 473 FRKKKFEDAYNAFVDTYMKAVSAFNMDKEDTALKLIKNKNDRKSKFLKAYVYLKKLNLDK 532
Query: 175 VKGARFYVTVGRNQLAAKEVE-IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
+ + G +++A + + EY A F+ Y + A+ R+
Sbjct: 533 ARKILKELAEGNDEIAKQAGYLYAYSFFSNEEYDKAYEEFKKFAEKYKNDPLGRRAVLRM 592
Query: 234 VEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
++ L DEA+++ + ++Y A L+
Sbjct: 593 ADSLYNLGKEDEAKKIYTQFIKKYAGSKEAVDAAYLL 629
>gi|328953891|ref|YP_004371225.1| hypothetical protein Desac_2216 [Desulfobacca acetoxidans DSM
11109]
gi|328454215|gb|AEB10044.1| hypothetical protein Desac_2216 [Desulfobacca acetoxidans DSM
11109]
Length = 315
Score = 40.5 bits (92), Expect = 0.22, Method: Composition-based stats.
Identities = 15/115 (13%), Positives = 30/115 (26%), Gaps = 5/115 (4%)
Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLA-----AKEVEIGRYYLKRGEYVAAIPRFQ 214
+ + Y Y + + + + AI F
Sbjct: 187 DPFAEGLTLYKQKSYGPAREKFQRYLEEHPKGEKAIEARYYLADSLYQEKHHDEAIVEFN 246
Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
+L Y + A ++ + A+ A ++ + YPQ A L
Sbjct: 247 KLLEGYPKSTLAPASLLKQAYAFKAQGKSKVHNLILEKLIADYPQSPEAVQARKL 301
>gi|189346281|ref|YP_001942810.1| tol-pal system protein YbgF [Chlorobium limicola DSM 245]
gi|189340428|gb|ACD89831.1| tol-pal system protein YbgF [Chlorobium limicola DSM 245]
Length = 255
Score = 40.5 bits (92), Expect = 0.22, Method: Composition-based stats.
Identities = 19/125 (15%), Positives = 40/125 (32%), Gaps = 14/125 (11%)
Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
+ + + S +++ Y S V A+F + E +
Sbjct: 145 MQKLAKNSFSEARESFSLLMQTYPKSDLVDDAQFTIAESYFNEKWYEKAVL--------- 195
Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
+Q+V+A Y+ + A+ + A+ L AR + YP A
Sbjct: 196 -----EYQVVIARYTKSNKRPAALYKQALAFEQLGDQVNARARFRDVVSVYPSSSEAALA 250
Query: 267 ETLVK 271
+ ++
Sbjct: 251 KKKLQ 255
>gi|58263492|ref|XP_569156.1| peroxisome targeting sequence binding protein [Cryptococcus
neoformans var. neoformans JEC21]
gi|134108322|ref|XP_777112.1| hypothetical protein CNBB3440 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259797|gb|EAL22465.1| hypothetical protein CNBB3440 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57223806|gb|AAW41849.1| peroxisome targeting sequence binding protein, putative
[Cryptococcus neoformans var. neoformans JEC21]
Length = 799
Score = 40.5 bits (92), Expect = 0.22, Method: Composition-based stats.
Identities = 19/229 (8%), Positives = 58/229 (25%), Gaps = 8/229 (3%)
Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL-LMSAFV 103
++ + D Y + + + +A ++ + P A +L +
Sbjct: 525 ELESEVQKDSTSHEAWYALGLKQQENEREDQAILALSKVIQLNPQYRPAYLALAVSYTNE 584
Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
+ ++ + + + + + +
Sbjct: 585 GENEAACTMLEDWIRLKDSKNTTGADGQKGKDRNKLIESLIEIARQTPHEIDADVQVALG 644
Query: 164 RIVERYTNSPYV--KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
+ Y + R + +G G A+ + L +
Sbjct: 645 VLFNMSGGQDYSKAEDCFLAALEARPEDWLLYNRLGATLANSGRSSEAVQYYHQALRLHP 704
Query: 222 DAEHAEEAMARLVEAYVALALMDE-AREVVSLIQERYPQ-GYWARYVET 268
A+ L AY+ L A+ ++ ++ ++ + Y +
Sbjct: 705 GFV---RALFNLGIAYMNLGEYQTAAQSILDALRLQHSEASEAYAYGQN 750
>gi|325122509|gb|ADY82032.1| hypothetical protein BDGL_001446 [Acinetobacter calcoaceticus
PHEA-2]
Length = 291
Score = 40.5 bits (92), Expect = 0.22, Method: Composition-based stats.
Identities = 19/114 (16%), Positives = 38/114 (33%), Gaps = 13/114 (11%)
Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
K + M ++ + NS Y A F++ Y A + +
Sbjct: 190 KKAIAPMQNFIKNHPNSVYTGNAYFWLAEFNL------------ATDPVNYNEAKKNYNV 237
Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMD-EAREVVSLIQERYPQGYWARYVET 268
V Y ++ A A+ +L + A + + I +YP+ A++
Sbjct: 238 VATQYPNSSKAPRALYQLYSIAKDVDKNTVSANQYKAKILSQYPKSEEAKFFNK 291
>gi|313673635|ref|YP_004051746.1| tetratricopeptide tpr_1 repeat-containing protein [Calditerrivibrio
nitroreducens DSM 19672]
gi|312940391|gb|ADR19583.1| Tetratricopeptide TPR_1 repeat-containing protein [Calditerrivibrio
nitroreducens DSM 19672]
Length = 246
Score = 40.5 bits (92), Expect = 0.22, Method: Composition-based stats.
Identities = 26/254 (10%), Positives = 69/254 (27%), Gaps = 19/254 (7%)
Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
+ I + + G + DV Y+ + +L + F +
Sbjct: 2 KKMLSIFILLSLIYGCSTK-----------DVELAESHYKMGLAYLNSDTDYLSIVEFEK 50
Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
P ++ + ++ + E +N+ Y
Sbjct: 51 ALAINPDDDRIYYAIATFYIKKNRISDAERYIKQALTLKSDDLEYQNLLATIYATKNEPL 110
Query: 143 QMIRDV-----PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
+ I +++ ++ ++ N + ++ + +
Sbjct: 111 KAINIWKKIADDPKYPTPEVVYFNIASAYQQMGNLSEAEFNFKKSIQANPRILNTYLTLS 170
Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
Y+++ Y+ A + L + +L Y + D+A ++ I
Sbjct: 171 NLYIQQKRYIDAETTLKQALDINPTFN---QGKYQLARVYYLQNINDKAITLLKEIITSE 227
Query: 258 PQGYWARYVETLVK 271
P A+ L+K
Sbjct: 228 PNSREAKDSIELLK 241
>gi|262279352|ref|ZP_06057137.1| conserved hypothetical protein [Acinetobacter calcoaceticus
RUH2202]
gi|262259703|gb|EEY78436.1| conserved hypothetical protein [Acinetobacter calcoaceticus
RUH2202]
Length = 287
Score = 40.5 bits (92), Expect = 0.22, Method: Composition-based stats.
Identities = 19/114 (16%), Positives = 38/114 (33%), Gaps = 13/114 (11%)
Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
K + M ++ + NS Y A F++ Y A + +
Sbjct: 186 KKAIAPMQNFIKNHPNSVYTGNAYFWLAEFNL------------ATDPVNYNEAKKNYNV 233
Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMD-EAREVVSLIQERYPQGYWARYVET 268
V Y ++ A A+ +L + A + + I +YP+ A++
Sbjct: 234 VATQYPNSSKAPRALYQLYSIAKDVDKNTASANQYKTKILSQYPKSEEAKFFNK 287
>gi|88604422|ref|YP_504600.1| TPR repeat-containing protein [Methanospirillum hungatei JF-1]
gi|88189884|gb|ABD42881.1| TPR repeat [Methanospirillum hungatei JF-1]
Length = 565
Score = 40.5 bits (92), Expect = 0.22, Method: Composition-based stats.
Identities = 26/219 (11%), Positives = 57/219 (26%), Gaps = 5/219 (2%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
+D Y A + ++ + A + + P + + +
Sbjct: 47 ESDPENPDLWYAMAEILKEQGDNEGAIHAITRAAEFSPGNSTILLAKAHLHITKGERDQA 106
Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
+A + + + ++ + + I ++ +
Sbjct: 107 NRAILKVLDILPGNKTALDLLSSLRMNTTTPLNYILVEHDLLIEPNNTWSAFNKGRLLFE 166
Query: 171 NSPYVKGARFYVT--VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
+ + +++ + A G Y + G Y AI Q L
Sbjct: 167 EGKHREALAWFIKATTYDQKNAPAWYFTGTTYTELGNYAQAIDALQSALTL---DPSNAG 223
Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
A + AY L AR + P W R+V
Sbjct: 224 AYYEMGRAYEKLGNRTAARNYYETAIKLNPDNVWTRFVY 262
Score = 37.5 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 29/223 (13%), Positives = 51/223 (22%), Gaps = 6/223 (2%)
Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
+++ YE A + + + +A E N P+ R L
Sbjct: 277 KELKTSLKGSSCQASAWYELANAYYQTGQYDQALEAINSALTIDPYTKEYRALYLSIRAA 336
Query: 104 QYSAGKY-QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
Q A Q + + Y G + +
Sbjct: 337 QDPASWSLQNVTKRAVDAPENASVWFYQGAIAYHDGRYADALTYLTSAVSLDPMNPEAWY 396
Query: 163 SRIVERYTNSPYVKGARFYVTVG--RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220
R V +Y Y + A G K G+ AI +
Sbjct: 397 YRGVTQYELGRYQDALCSFDKTILLDPGNAWAYYYRGDILQKGGQCEYAIAYLNKGIQLD 456
Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
Y+ + A + +++P WA
Sbjct: 457 PTIPWT---YYVKGNCYLNQSRYQLAADEFDRSIDQFPCNRWA 496
>gi|58699370|ref|ZP_00374137.1| competence lipoprotein ComL, putative [Wolbachia endosymbiont of
Drosophila ananassae]
gi|58534111|gb|EAL58343.1| competence lipoprotein ComL, putative [Wolbachia endosymbiont of
Drosophila ananassae]
Length = 150
Score = 40.5 bits (92), Expect = 0.22, Method: Composition-based stats.
Identities = 38/151 (25%), Positives = 67/151 (44%), Gaps = 11/151 (7%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+YK +T F + F + + + E+YE+AV ++ + +A
Sbjct: 7 MYKTLITCFIFLICSFTQSYA-----------DDLEKTETELYEEAVELFDQKKYKQAIR 55
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
F++ +PF+ A K+ L+S Y+ G Y AAS ++YI Y +++ YVYYL
Sbjct: 56 AFHKIEDLYPFSYWAMKAKLLSGVSHYNMGNYSSAASDMDDYIYVYSNGEDLPYVYYLRV 115
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
+SY I V Q+ L+ + +
Sbjct: 116 LSYYMQINKVQLGQQTAYKTLELATEYINFQ 146
>gi|120437583|ref|YP_863269.1| TPR repeat-containing protein [Gramella forsetii KT0803]
gi|117579733|emb|CAL68202.1| secreted protein containing tetratricopeptide repeats [Gramella
forsetii KT0803]
Length = 454
Score = 40.5 bits (92), Expect = 0.22, Method: Composition-based stats.
Identities = 28/244 (11%), Positives = 65/244 (26%), Gaps = 5/244 (2%)
Query: 19 LYKFALTIFFSIAVCFLVG--WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76
+ K + ++ + + D +E + +A+ +N+ KA
Sbjct: 1 MKKLIFILLMALLAIPVNSQELPQPFQDINQDDLGNVSDEFQEYFFEALKQKGIENYEKA 60
Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
+C + V L + + E Q + Y
Sbjct: 61 IIALEKCLKLDTEKSVVYFELGKNYQELEQFEQAITNFKKASELEPQKESILVYLFQTYR 120
Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196
+ + I + + Q ++ + N + A + +L A
Sbjct: 121 MTEDFDGAITTLKKLIPIDEAYKQDLANLYLLNEN---YEQALSLLDELDTKLGANSYRN 177
Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
+ + + + SD E+ L+ Y +EA +V + +
Sbjct: 178 SLRRQIFARTNNTVAQIENLQQGISDNPDVEQNYLNLIYIYSENGEDEEAFKVAQELLDT 237
Query: 257 YPQG 260
P
Sbjct: 238 NPGS 241
>gi|313891912|ref|ZP_07825514.1| tetratricopeptide repeat protein [Dialister microaerophilus UPII
345-E]
gi|313119687|gb|EFR42877.1| tetratricopeptide repeat protein [Dialister microaerophilus UPII
345-E]
Length = 205
Score = 40.5 bits (92), Expect = 0.22, Method: Composition-based stats.
Identities = 11/76 (14%), Positives = 26/76 (34%), Gaps = 5/76 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQ-----SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNF 73
+ +F I V G ++ +++ + ++YEKA K+ +F
Sbjct: 1 MKNIIKYLFIFICVFAFTGCSDNVSQVKNNDISSTETIVLDKKSEDLYEKANNLYKQNDF 60
Query: 74 SKAYEYFNQCSRDFPF 89
A + ++
Sbjct: 61 DNALKVADEAVSYNKN 76
>gi|298735702|ref|YP_003728227.1| paralysed flagella protein [Helicobacter pylori B8]
gi|298354891|emb|CBI65763.1| paralysed flagella protein [Helicobacter pylori B8]
Length = 801
Score = 40.5 bits (92), Expect = 0.22, Method: Composition-based stats.
Identities = 9/53 (16%), Positives = 17/53 (32%)
Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
NY + EA+ + +A +A I Y +A + +
Sbjct: 260 KNYPTDPNIPEALYYVAKALDENNNYKQAMRYYKRILLEYKNSRYAPLAQMRL 312
>gi|238753877|ref|ZP_04615237.1| Type IV pilus bioproteinsis/stability protein PilW [Yersinia
ruckeri ATCC 29473]
gi|238707865|gb|EEQ00223.1| Type IV pilus bioproteinsis/stability protein PilW [Yersinia
ruckeri ATCC 29473]
Length = 249
Score = 40.5 bits (92), Expect = 0.22, Method: Composition-based stats.
Identities = 28/252 (11%), Positives = 67/252 (26%), Gaps = 17/252 (6%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
K +AV L G S + + +V R + + +L + + A +
Sbjct: 1 MKLKTLWGACLAVGILAGCSGSSPDNTVVPAVGQTRL-----QLGLAYLAQGDLPAARQN 55
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
++ P A Y + +A+ N +
Sbjct: 56 LDKAVNAAPQD-----YQAQLAMALYEQRVGENSAAEQRYRQAMQLAPGNGTVLNNYGAF 110
Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV------KGARFYVTVGRNQLAAKE 193
+ Q + ++L ++ + N+ Y + + +
Sbjct: 111 LCSLGQYVEAQQQFSAAVLLPDYGQVADSLENAGYCFLRANQNDQAKVLLSRALKYDPDK 170
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDA-EHAEEAMARLVEAYVALALMDEAREVVSL 252
+ +R + QL+L Y + E++ + D +
Sbjct: 171 GQPLLTEAERQFGEGKRAQAQLLLDVYQHILPASAESLWLQIRFAALAGRQDSVQRYGKQ 230
Query: 253 IQERYPQGYWAR 264
+ +PQ +
Sbjct: 231 LARSFPQSKQYQ 242
>gi|221106374|ref|XP_002163424.1| PREDICTED: similar to polaris, partial [Hydra magnipapillata]
Length = 867
Score = 40.5 bits (92), Expect = 0.22, Method: Composition-based stats.
Identities = 35/249 (14%), Positives = 70/249 (28%), Gaps = 34/249 (13%)
Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
+ FL G QS + + +D + K N+ KA +Y+ +
Sbjct: 494 LSFLYFLEGDVAQSDKHAEIAISSDRYNPAALLNKGNAEYYNGNYLKAKDYYAEALNIEA 553
Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
++L K+ +A + P + V I +
Sbjct: 554 ---SCTEALHNLGLCYKKMSKFDEALECFHKLNLVLPNNAEV-----------ICQIGQI 599
Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
+ + T L++ +++ V + + K Y Y +
Sbjct: 600 YENDKNTAEALEWYQQLLNIVPTDC---EVLRKVAMLYEEDGDKSQAFQYMYEAFRYYPS 656
Query: 209 AIPRFQLVLANYSDAEHAEEAM-----------------ARLVEAYVALALMDEAREVVS 251
I + Y DA+ E+A+ L Y +A E
Sbjct: 657 CIKTLVWLGGYYIDAQFIEKAITYFERAVQVQPLEVRWHLMLATCYRKAGNYTQAMETYK 716
Query: 252 LIQERYPQG 260
I +++P+
Sbjct: 717 EIHKKFPEN 725
>gi|257452679|ref|ZP_05617978.1| hypothetical protein F3_06399 [Fusobacterium sp. 3_1_5R]
gi|257466540|ref|ZP_05630851.1| hypothetical protein FgonA2_03768 [Fusobacterium gonidiaformans
ATCC 25563]
Length = 410
Score = 40.5 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 25/54 (46%)
Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
+ + + +E E +L AY L E ++ ++L++ERY W + +
Sbjct: 348 KSLSHKGNSSERRAETYYKLASAYNKLGEKREYKKYLTLLKERYANSLWGKKAQ 401
>gi|294661410|ref|YP_003573286.1| hypothetical protein Aasi_1962 [Candidatus Amoebophilus asiaticus
5a2]
gi|227336561|gb|ACP21158.1| hypothetical protein Aasi_1962 [Candidatus Amoebophilus asiaticus
5a2]
Length = 1031
Score = 40.5 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 33/216 (15%), Positives = 67/216 (31%), Gaps = 15/216 (6%)
Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
D Y+KA+++ F +A + P K+L A++
Sbjct: 571 DLYTKTEDNYPAHNRYQKALIYGLLGKFVEAKQNLESIINTCPHTAYYEKALFEYAYLAL 630
Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP---------YDQRATK 156
+Y A +I + P S V ++ + + D
Sbjct: 631 QHQEYDLAIKSFTNFIQKKPYSTLVPDALLHRAVAKVNLKQYAEAGKDYETLLKDYPTHP 690
Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGR------NQLAAKEVEIGRYYLKRGEYVAAI 210
+ + + + Y+ + LAA E + Y A+
Sbjct: 691 NAQSALLELPNLVVQEGKPEKLQQYLASYKAANPSSETLAAISFEAAKNLFYSQNYTPAV 750
Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
+ + + +Y ++ +EA + EAY LA ++A
Sbjct: 751 QQLKEFITSYPNSTLIDEANFLIAEAYYRLAEDEQA 786
Score = 35.2 bits (78), Expect = 9.9, Method: Composition-based stats.
Identities = 29/210 (13%), Positives = 50/210 (23%), Gaps = 24/210 (11%)
Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
D YQ +Y + + + A F Q L +
Sbjct: 502 DKKNTNYYQDALYGLGYVLFNTEKYKAALPLFLQYINIPNITNDNNWRLDVLVRTADCYY 561
Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
+ + Y + Q + I+
Sbjct: 562 AIKDYHKALDLYTKTEDNYPAH----------NRYQKALIYGLLGKFVEAKQNLESIINT 611
Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
++ Y + A F E L+ EY AI F + + +
Sbjct: 612 CPHTAYYEKALF--------------EYAYLALQHQEYDLAIKSFTNFIQKKPYSTLVPD 657
Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYP 258
A+ A V L EA + + + YP
Sbjct: 658 ALLHRAVAKVNLKQYAEAGKDYETLLKDYP 687
>gi|289207918|ref|YP_003459984.1| type IV pilus biogenesis/stability protein PilW [Thioalkalivibrio
sp. K90mix]
gi|288943549|gb|ADC71248.1| type IV pilus biogenesis/stability protein PilW [Thioalkalivibrio
sp. K90mix]
Length = 256
Score = 40.5 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 24/248 (9%), Positives = 61/248 (24%), Gaps = 11/248 (4%)
Query: 27 FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86
+ L G + R+V + E+ + +L+E +A +
Sbjct: 10 VVILLGLALGGCAAMAEREVTGERAEAAEVNAEL---GIGYLREGEVDQAERNLKRALEF 66
Query: 87 FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD-----YVYYLVGMSY 141
P +A + + + + ++ P +
Sbjct: 67 DPGHPLANLGMANVYERRGALDRAEEHYRRALRRDDGNPYVQTSLGALLCRREAFDEAQE 126
Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
D ++ L + + Q +E+
Sbjct: 127 LFARAIDNPDYDQREIALMNSGVCFADAGQTERAEEKLREALRINPQYPRALLEMASLTY 186
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
+ + Q + ++ E + A +AL A + ++ +YP
Sbjct: 187 EDDRPMQTRAFLQRLEGLGVESS---ETLFLCYRAELALGNRRAANDCAERLRRQYPDSM 243
Query: 262 WARYVETL 269
+E +
Sbjct: 244 ELVRLEDM 251
>gi|15612260|ref|NP_223913.1| flagellar functional protein [Helicobacter pylori J99]
gi|4155785|gb|AAD06761.1| FLAGELLAR FUNCTIONAL PROTEIN [Helicobacter pylori J99]
Length = 803
Score = 40.5 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 27/205 (13%), Positives = 56/205 (27%), Gaps = 17/205 (8%)
Query: 70 EQNFSKAYEYFNQ----CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP 125
++++ KA F + + L + + I Q
Sbjct: 123 DRDYKKAIPLFVENDAKAKMWQIIGYDQKIPFLSEKDNAQKGLNFPIIIKDAQTPIIQEL 182
Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
+ N + A + D +A L+ +SR + Y + + K +
Sbjct: 183 DVNNKPLLTTKGYDLNAYLEAKKQMDSQAYFDALRTISRAFKNYPQTIFKKDLYLLEIIA 242
Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
+L K+ I + NY + EA+ + +A +
Sbjct: 243 LGKLGIKK-------------SLLIDIGTQWIKNYPTDPNIPEALYYVAKALDENNNYKQ 289
Query: 246 AREVVSLIQERYPQGYWARYVETLV 270
A I Y +A + +
Sbjct: 290 AVRYYKRILLEYKNSRYAPLAQMRL 314
>gi|317014666|gb|ADU82102.1| flagellar functional protein [Helicobacter pylori Gambia94/24]
Length = 803
Score = 40.5 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 27/202 (13%), Positives = 55/202 (27%), Gaps = 17/202 (8%)
Query: 70 EQNFSKAYEYFNQ----CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP 125
++++ KA F + + L + + I Q
Sbjct: 123 DRDYKKAIPLFVENDAKAKMWQIIGYDQKIPFLSEKDNAQKGLNFPITIKDAQTPIIQEL 182
Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
+ N + A + D +A L+ +SR + Y + + K +
Sbjct: 183 DVNNKPLLTTKGYDLNAYLEAKKQMDSQAYFDALRTISRAFKNYPQTIFKKDLYLLEIIA 242
Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
+L K+ I + NY + EA+ + +A +
Sbjct: 243 LGKLGIKK-------------PLLIDIGTQWIKNYPTDPNIPEALYYVAKALDENNNYKQ 289
Query: 246 AREVVSLIQERYPQGYWARYVE 267
A I Y +A +
Sbjct: 290 AVRYYKRILLEYKNSRYAPLAQ 311
>gi|302338557|ref|YP_003803763.1| hypothetical protein Spirs_2047 [Spirochaeta smaragdinae DSM 11293]
gi|301635742|gb|ADK81169.1| conserved hypothetical protein [Spirochaeta smaragdinae DSM 11293]
Length = 314
Score = 40.5 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 17/95 (17%), Positives = 34/95 (35%)
Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
++ Y ++ + GR + ++ AI + Y D E
Sbjct: 78 LKNYDDAARDLEYFLENFPKSSFYRDGSYWKGRLLFLQNDFDNAIRALYDFIEAYPDHEF 137
Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
A + E+ AL +++A+ + +LI YP
Sbjct: 138 VANAYYWIGESLFALGHLEKAQRIFNLIITDYPAS 172
>gi|254473133|ref|ZP_05086531.1| TPR repeat:Molluscan rhodopsin C-terminal domain protein
[Pseudovibrio sp. JE062]
gi|211957854|gb|EEA93056.1| TPR repeat:Molluscan rhodopsin C-terminal domain protein
[Pseudovibrio sp. JE062]
Length = 295
Score = 40.5 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 13/82 (15%), Positives = 28/82 (34%)
Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
+ A + +G L + +Y A F ++ ++E A E++ +L A
Sbjct: 194 DTFLGMYPDHELTANAQHWLGESLLAQRQYENAAQAFLKSYTDFPESELAPESLLKLGTA 253
Query: 237 YVALALMDEAREVVSLIQERYP 258
+ A E + +
Sbjct: 254 LTGMGNAPAACETYEQLLANFQ 275
>gi|293609245|ref|ZP_06691547.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292827697|gb|EFF86060.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 291
Score = 40.5 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 19/114 (16%), Positives = 38/114 (33%), Gaps = 13/114 (11%)
Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
K + M ++ + NS Y A F++ Y A + +
Sbjct: 190 KKAIAPMQNFIKNHPNSVYTGNAYFWLAEFNL------------ATDPVNYNEAKKNYNV 237
Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMD-EAREVVSLIQERYPQGYWARYVET 268
V Y ++ A A+ +L + A + + I +YP+ A++
Sbjct: 238 VATQYPNSSKAPRALYQLYSIAKDVDKNTVSANQYKAKILSQYPKSEEAKFFNK 291
>gi|83645384|ref|YP_433819.1| hypothetical protein HCH_02602 [Hahella chejuensis KCTC 2396]
gi|83633427|gb|ABC29394.1| uncharacterized protein conserved in bacteria [Hahella chejuensis
KCTC 2396]
Length = 963
Score = 40.5 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 10/63 (15%), Positives = 29/63 (46%)
Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
+ AI ++ +L Y + ++ + +L +AY D++ ++ + + YP+ +
Sbjct: 108 YFAVAISAYEGLLKKYPNRAENDQVLYQLAKAYDLEGRRDDSFNALNRLVKEYPRSSYFH 167
Query: 265 YVE 267
+
Sbjct: 168 EAQ 170
Score = 39.4 bits (89), Expect = 0.48, Method: Composition-based stats.
Identities = 20/194 (10%), Positives = 48/194 (24%), Gaps = 14/194 (7%)
Query: 66 LFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP 125
+ + +++A + +++ P R + A+
Sbjct: 580 SQFELKQYAEAEKSYSRVLALMPANDKRRGEIAELLAASIYKQGELMLAANDVNGAIDQF 639
Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
V + Q + ++ +RY K +
Sbjct: 640 LRVGQAAPTASVRANADYDAATYMLQQGQWDRAISVLNGFRQRYPQHELAKDVPAKL--- 696
Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
Y ++ AA ++ ++ D E E++ E Y +
Sbjct: 697 -----------AMAYRNTEQWDAAAGELAVISQSHPDGETRRESLLLSAELYEKSGQTQK 745
Query: 246 AREVVSLIQERYPQ 259
A + YP+
Sbjct: 746 AIDTYRDYANSYPE 759
Score = 39.0 bits (88), Expect = 0.65, Method: Composition-based stats.
Identities = 28/206 (13%), Positives = 58/206 (28%), Gaps = 9/206 (4%)
Query: 55 RYQREVYEK-AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
Y+ +Y++ L +KE+ ++ A + + P + + AG
Sbjct: 283 SYEHLIYQQYGELLVKEERYTDAVSVYRRFIELHPLSKWSPYYQERVIQTLIVAGF---G 339
Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
+S+ E Y+ + +L + + N
Sbjct: 340 SSVLPEKAAFVKNYGVTSDFYWRQQDEKVKAFTADKLRVYIDELATHHHAAAQTLDRNVA 399
Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
+ R G+ A + R EY +A +Q + + A + +
Sbjct: 400 AGRNGRAKGLDGKEISAQQAR-----TAMRDEYASAAAYYQEFVDTFPQDPKAPQMVFLR 454
Query: 234 VEAYVALALMDEAREVVSLIQERYPQ 259
E A+ +EA Y
Sbjct: 455 GETLFAVQRYEEAIVAYEKAAYEYQG 480
>gi|30248172|ref|NP_840242.1| TPR repeat-containing protein [Nitrosomonas europaea ATCC 19718]
gi|30180057|emb|CAD84057.1| TPR repeat [Nitrosomonas europaea ATCC 19718]
Length = 263
Score = 40.5 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 30/258 (11%), Positives = 57/258 (22%), Gaps = 14/258 (5%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDV---RYQREVYEKAVLFLKEQNFSK 75
+ + T V L G ++ + + E A + +
Sbjct: 1 MNRLIRTGVLGFLVW-LAGCGHAPVQEKPTPEELKQRALQSAKIHTELAGQYYHRGQYRV 59
Query: 76 AYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY-- 132
A E + +A L+ +Q N +
Sbjct: 60 AIEEAEIALQKKTDYAPAYNMLGLVYMDLQEDDRAEWNFERGLGITPNDPDIRNNFGWFL 119
Query: 133 ----VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
+ M + V + + + V R
Sbjct: 120 CQRKPDGIEQAIGHFMAAVRDPLYETPERTYTNAGLCVLKQNDFERAQSYFQEALVIRPG 179
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
+ + RGE A L Y A ++ V A ++
Sbjct: 180 YPLARLGLVELDFSRGEVKKAWAAINRYLQTYPP---APGSLWLAVRIARANGDVNAETN 236
Query: 249 VVSLIQERYPQGYWARYV 266
+Q+R+P AR
Sbjct: 237 YAFQLQKRFPDSREARES 254
>gi|332702707|ref|ZP_08422795.1| cell wall hydrolase/autolysin [Desulfovibrio africanus str. Walvis
Bay]
gi|332552856|gb|EGJ49900.1| cell wall hydrolase/autolysin [Desulfovibrio africanus str. Walvis
Bay]
Length = 593
Score = 40.5 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 11/72 (15%), Positives = 23/72 (31%), Gaps = 7/72 (9%)
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE-------AREVVSLIQ 254
+R + F+ A + +A +++ L + L L A + +
Sbjct: 61 QRSAWSQVEEHFRRAYAGDPEGSYAPKSLFYLGRVHEELGLRSNRKDDFIRAVDYFQRMS 120
Query: 255 ERYPQGYWARYV 266
R+P W
Sbjct: 121 TRFPNHAWTDDS 132
Score = 39.8 bits (90), Expect = 0.43, Method: Composition-based stats.
Identities = 18/150 (12%), Positives = 43/150 (28%), Gaps = 2/150 (1%)
Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
+ A + K + VE + Y
Sbjct: 25 MAWPGNGQAWAATAATSYKAGWHAFHSLLKNQDKASQRSAWSQVEEHFRRAYAGDPEGSY 84
Query: 183 TVGR-NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA-YVAL 240
L E+G ++ +++ A+ FQ + + + ++++ R + L
Sbjct: 85 APKSLFYLGRVHEELGLRSNRKDDFIRAVDYFQRMSTRFPNHAWTDDSLLRKAKINLERL 144
Query: 241 ALMDEAREVVSLIQERYPQGYWARYVETLV 270
D A + LI + +G + ++
Sbjct: 145 GEKDLAYVDLLLIVHNHKKGDMHAQAQAML 174
>gi|317178017|dbj|BAJ55806.1| paralysed flagella protein [Helicobacter pylori F16]
Length = 803
Score = 40.5 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 9/53 (16%), Positives = 16/53 (30%)
Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
NY EA+ + +A +A I Y +A + +
Sbjct: 262 KNYPTDPSIPEALYYVAKALDENNNYKQAMHYYKRILLEYKDSRYAPLAQMRL 314
>gi|227537433|ref|ZP_03967482.1| TPR domain protein [Sphingobacterium spiritivorum ATCC 33300]
gi|227242707|gb|EEI92722.1| TPR domain protein [Sphingobacterium spiritivorum ATCC 33300]
Length = 1040
Score = 40.5 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 28/236 (11%), Positives = 66/236 (27%), Gaps = 19/236 (8%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
+ YQ+ Y + + + E+ F A F + + + ++ A Y K
Sbjct: 458 KEANAAYQKVTYYRGLEYYNERAFENAISMFMRSEANRYDEEINALAIYWKAEAMYEVRK 517
Query: 110 YQQAASLGEEY------------------ITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151
Y++A + ++ + + M +
Sbjct: 518 YKEATANFNKFLSLPAARNTDVYNYANYALAYAAFRNENYNTSANYFERFLSMGGKEGIE 577
Query: 152 QRATKLMLQYMSRIVERYTNS-PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
+ ++ N + + + G +G I
Sbjct: 578 LNTRNDAIARLADSYFSLKNYGRAMTEYDKLINSKAQSQDYALFQRGIIQGLQGNSSGKI 637
Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
Q V+ Y + +A++ + Y L D+A + + E+YP+ +
Sbjct: 638 ATLQSVVQKYPKSNYADDVAFEIPYTYFTLGQYDQAISGLQSMVEKYPRSSYVPRA 693
Score = 37.9 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 27/240 (11%), Positives = 64/240 (26%), Gaps = 19/240 (7%)
Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS----------RDFPFAGVARK 95
+ + +Y KA + + + +A FN+ ++ +A
Sbjct: 491 SEANRYDEEINALAIYWKAEAMYEVRKYKEATANFNKFLSLPAARNTDVYNYANYALAYA 550
Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
+ + + + + G+E I + + + YD+
Sbjct: 551 AFRNENYNTSANYFERFLSMGGKEGIELNTRNDAIARLADSYFSLKNYGRAMTEYDKLIN 610
Query: 156 KLMLQY---------MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
+ + + + N EI Y G+Y
Sbjct: 611 SKAQSQDYALFQRGIIQGLQGNSSGKIATLQSVVQKYPKSNYADDVAFEIPYTYFTLGQY 670
Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
AI Q ++ Y + + A+ + D A + + ++Y A+
Sbjct: 671 DQAISGLQSMVEKYPRSSYVPRALVTIGLVQYNQDNNDAALKTFQRVVDQYSTTDEAKQA 730
Score = 36.7 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 19/218 (8%), Positives = 56/218 (25%), Gaps = 9/218 (4%)
Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
D + ++ + ++++ KA E+F + + A+ +
Sbjct: 128 KYIKDYPASPNSKAAYFQIGRSYYAKKDYKKAIEWFTKIDGKNLAGAENTEYRFKLAYSR 187
Query: 105 YSAGKYQQAASLG-----EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
+ Y A + ++ Q Y+ YL + T
Sbjct: 188 FMTEDYTSAKPVFESLKDQKSEYQEASIYYYAYLCYLDAEYKTALNEFERLQGSKTYESS 247
Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219
+ + Y + + + + E ++ R + + +
Sbjct: 248 YPYYITALYFLDKRYDDVLNYALPILQTTKQDNETDMFRVIAATYFIKGDLKKSKEYYDK 307
Query: 220 Y----SDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+ + ++ L D+A + +
Sbjct: 308 FQSQDQGKTQNNQDSYQIGYINYKLGDYDKAITELEKM 345
>gi|157164370|ref|YP_001466352.1| ADP-heptose-LPS heptosyltransferase II [Campylobacter concisus
13826]
gi|112800119|gb|EAT97463.1| TPR repeat-containing protein [Campylobacter concisus 13826]
Length = 280
Score = 40.5 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 13/101 (12%), Positives = 32/101 (31%)
Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
+ NS Y+ + A +G + Y AI ++ + + A++
Sbjct: 176 LLNSGNSTEAAEYFEYLNKKGYKTGASNYYLGEVAYSQKSYSTAIQYYKKSIQSEDKADY 235
Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
+ + ++ + A ++ YP A+
Sbjct: 236 TPKLLYHTAISFDKIGDTQSANRFYKALKVGYPDSKEAKAA 276
>gi|109899244|ref|YP_662499.1| tetratricopeptide TPR_2 [Pseudoalteromonas atlantica T6c]
gi|109701525|gb|ABG41445.1| Tetratricopeptide TPR_2 [Pseudoalteromonas atlantica T6c]
Length = 251
Score = 40.5 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 18/168 (10%), Positives = 42/168 (25%), Gaps = 2/168 (1%)
Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
+ Q + + + + + Y + ++
Sbjct: 44 FNTRTAQQHRVQEQLDLLQNEVNELRGSIEKHNYQLERILERQRELYLEIDKRIAAVMTQ 103
Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
+ + LK Y AIP FQ L N+ ++
Sbjct: 104 NGSGATDEFNQTNQVSQPSSQTSLNEDQAYDKAVNLILKDKLYDDAIPEFQSFLQNFPNS 163
Query: 224 EHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+A A L + A + ++P ++ + ++K
Sbjct: 164 SYASNAHYWLGQLLFNKQDWAAAANQFETLMNQFPDS--SKRADAMLK 209
Score = 39.0 bits (88), Expect = 0.76, Method: Composition-based stats.
Identities = 16/116 (13%), Positives = 42/116 (36%), Gaps = 14/116 (12%)
Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
+ ++ + NS Y A +++ G+ + ++ AA +F+
Sbjct: 146 YDDAIPEFQSFLQNFPNSSYASNAHYWL--------------GQLLFNKQDWAAAANQFE 191
Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
++ + D+ +AM +L + + A ++ + YP + E +
Sbjct: 192 TLMNQFPDSSKRADAMLKLGICEQERSNIARAEQLWKKVLTEYPTSSARKLAEIKL 247
>gi|118578874|ref|YP_900124.1| hypothetical protein Ppro_0433 [Pelobacter propionicus DSM 2379]
gi|118501584|gb|ABK98066.1| TPR repeat-containing protein [Pelobacter propionicus DSM 2379]
Length = 254
Score = 40.5 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 33/257 (12%), Positives = 72/257 (28%), Gaps = 13/257 (5%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
+ +A+ + G T+ Y+ + +L E+N++ A
Sbjct: 3 LRLRHITLLLVALFAVAGCVS-----TRNPWQTESNLGSYHYQMGLSYLGERNYTGALVE 57
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN-----VDYVY 134
+ ++ P +L ++ + + Y ++N +
Sbjct: 58 LTEAAKLEPDNPEVLYNLGIAYMGKRRPDLAEPRFLRAITLKPNYSTARNDLGVAYLELK 117
Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
I T+ ++ + P + G + +
Sbjct: 118 RWDNAIQQFKIVKDDLFFEFTENAAINLALAYLGKGDYPRSLAELNAILRGNPRRLEARL 177
Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
+GR Y AI +Q V+ Y D +A L AY+ + + AR +
Sbjct: 178 SLGRVYFAMDRPEQAIAEYQRVIDIYQDYG---DAHYHLGLAYLKVQNIPAARNAFREVI 234
Query: 255 ERYPQGYWARYVETLVK 271
P R ++
Sbjct: 235 RIKPNTELGRSAMGYLE 251
>gi|312215716|emb|CBX95668.1| similar to peroxisomal targeting signal receptor [Leptosphaeria
maculans]
Length = 646
Score = 40.5 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 14/198 (7%), Positives = 42/198 (21%), Gaps = 1/198 (0%)
Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
+A+ ++ ++ +S+ + + E
Sbjct: 229 EALDAQANKDIEAELNELDRSVAQEAVDFGDFESVWKGIQAETEYARQLANEDNFVEGHV 288
Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
+ + M + + + ++ + A
Sbjct: 289 GDLDQWEGFDGLNTHSVRDPAMGDYLFEQENLFTNVTNPFEEGIKIMEEGGNLSLAALAF 348
Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242
+ R + + P + + EA+ L +Y
Sbjct: 349 EAAVQKDPNHIAAWVRLGESQAQNEKETPAIRALEHALKQDPSNLEALMGLAVSYTNEGY 408
Query: 243 MDEAREVVSL-IQERYPQ 259
A + + +YP
Sbjct: 409 ESTAYRTLERWLATKYPS 426
>gi|294788232|ref|ZP_06753475.1| putative periplasmic protein [Simonsiella muelleri ATCC 29453]
gi|294483663|gb|EFG31347.1| putative periplasmic protein [Simonsiella muelleri ATCC 29453]
Length = 255
Score = 40.5 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 27/252 (10%), Positives = 63/252 (25%), Gaps = 10/252 (3%)
Query: 23 ALTIFFSIAVCFLVGW--ERQSSRDVYLDSVTDVRYQREVY-----EKAVLFLKEQNFSK 75
+ I F + L +++ T ++Y + L F +
Sbjct: 1 MINIKFLPLIALLSACVTTTHQPVATPIETDTIGEVVAQLYTPIGAASSENSLLPDEFEQ 60
Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
+ V R + + L + + +
Sbjct: 61 RLTHLT-LENMKLRQEVMRLKEKLQPRPTHILPTIAPKKKLIKASHVSGTQPEKTLLAPD 119
Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
+ I V A +L + + + Y + G +
Sbjct: 120 APEVPTLAQIAPVTIKNDAYELAQKQFRQ--KNYQQVINMLRNADAGGDGSIMARKQMYL 177
Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
+ + K + I Q + +S + A EA + + + D A++ +
Sbjct: 178 LLLSHQKLNNCQSVINIGQRLAGRFSGSHEAAEAQFMVGQCQWDIQQRDIAKDTWRRLIA 237
Query: 256 RYPQGYWARYVE 267
P A+ +
Sbjct: 238 SQPNSSAAQRAK 249
>gi|254410536|ref|ZP_05024315.1| Tetratricopeptide repeat family [Microcoleus chthonoplastes PCC
7420]
gi|196182742|gb|EDX77727.1| Tetratricopeptide repeat family [Microcoleus chthonoplastes PCC
7420]
Length = 1491
Score = 40.5 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 25/224 (11%), Positives = 55/224 (24%), Gaps = 6/224 (2%)
Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
+ V + + + V + + V + + +A F+Q P +
Sbjct: 158 SGYNQESVPVSNSSTVSGAEFWFNQGVTLYELGRYEEALAKFDQAISLQPDYYHPWDNRG 217
Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
+ + Y ++ V + + + + ++
Sbjct: 218 GVLIKLGRHKEALASFDRAISLQPDYYQAWRGRGVVLGMLGRHKEALANLDQAISLQPDF 277
Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI---GRYYLKRGEYVAAIPRFQL 215
+ + A + G K G A+ F
Sbjct: 278 YKTWDNRGAALGELGRYEEALANFDQAISLQPDDSSAWNNRGVVLFKLGRNEEALASFDQ 337
Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
V++ D H A +L A L +EA + P
Sbjct: 338 VISLQPDDYH---AWFKLGVALGELGRNEEALASFDQVISLQPD 378
Score = 38.6 bits (87), Expect = 0.98, Method: Composition-based stats.
Identities = 27/215 (12%), Positives = 50/215 (23%), Gaps = 8/215 (3%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
+ K + +A F+Q P A + + F + +
Sbjct: 419 NRGAALFKLGRYEEALANFDQVISLQPDYYPAWDNRGAALFKLGRNEEALASFDQVISLQ 478
Query: 122 ---TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
+ V V Q ++ +
Sbjct: 479 PDDYHAWFKRGVALGELGRNEEALASFDQVISLQPDYYPAWDNRGVVLFELGRNEEALAN 538
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
+ ++ G K G + A+ F ++ D H A + A
Sbjct: 539 FDQAISLQPDYSSAWNNRGAALFKLGRHEEALTNFDQAISLQPDDYH---AWFKRGVALF 595
Query: 239 ALALMDEAREVVSLIQERYPQGY--WARYVETLVK 271
L +EA + P Y W + L K
Sbjct: 596 KLGRHEEALTNFDQVISLQPDDYHAWFKRGVALFK 630
>gi|228923717|ref|ZP_04086995.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
thuringiensis serovar huazhongensis BGSC 4BD1]
gi|228835846|gb|EEM81209.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
thuringiensis serovar huazhongensis BGSC 4BD1]
Length = 273
Score = 40.5 bits (92), Expect = 0.24, Method: Composition-based stats.
Identities = 13/73 (17%), Positives = 24/73 (32%)
Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
+Q+ K LT S ++ L + + L E+ EKA L+++
Sbjct: 1 MFQMKKLLLTALISTSIFGLAACGGKDKDEKKLVVGASNVPHAEILEKAKPLLEKKGIEL 60
Query: 76 AYEYFNQCSRDFP 88
+ F
Sbjct: 61 EVKKFQDYVLPNK 73
>gi|220909583|ref|YP_002484894.1| lytic transglycosylase catalytic subunit [Cyanothece sp. PCC 7425]
gi|219866194|gb|ACL46533.1| Lytic transglycosylase catalytic [Cyanothece sp. PCC 7425]
Length = 735
Score = 40.5 bits (92), Expect = 0.24, Method: Composition-based stats.
Identities = 13/80 (16%), Positives = 27/80 (33%)
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
A + + + + AA + ++ A EA+ E L ++
Sbjct: 372 AELRWTLVQQQASQQNWAAARRLALELSDRNPNSPLAPEAVFWAGEWARQLGEKAAEQQA 431
Query: 250 VSLIQERYPQGYWARYVETL 269
+ + YPQ Y+ +L
Sbjct: 432 FQRLWQTYPQSYYTWRAASL 451
>gi|307153690|ref|YP_003889074.1| TPR repeat-containing protein [Cyanothece sp. PCC 7822]
gi|306983918|gb|ADN15799.1| TPR repeat-containing protein [Cyanothece sp. PCC 7822]
Length = 275
Score = 40.5 bits (92), Expect = 0.24, Method: Composition-based stats.
Identities = 27/203 (13%), Positives = 52/203 (25%), Gaps = 6/203 (2%)
Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
E+Y V L N++ A F Q P A + A++
Sbjct: 30 PPPQKQLNAVELYNNGVDKLSAANYTGAIADFTQAIALAPNDPDAYYN-RAYAYLILGDF 88
Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
+ A I + Y + + +
Sbjct: 89 EKAVADYSQALQINPNYTYAYGNRCYVYFLSKKYEAAITDCDKAISLQADYADFYIYRGN 148
Query: 169 -YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
+ + A + A + + RG ++ + +A+Y+D+
Sbjct: 149 AKSELNQNQEALSDYEKAISLAANNPKTRAKAFYNRGRTYQSLENHKQAIADYTDSIALN 208
Query: 228 ----EAMARLVEAYVALALMDEA 246
+A +Y AL EA
Sbjct: 209 PDDGDAYYNRAASYYALGNNQEA 231
>gi|124003540|ref|ZP_01688389.1| tetratricopeptide repeat domain protein [Microscilla marina ATCC
23134]
gi|123991109|gb|EAY30561.1| tetratricopeptide repeat domain protein [Microscilla marina ATCC
23134]
Length = 629
Score = 40.5 bits (92), Expect = 0.24, Method: Composition-based stats.
Identities = 17/211 (8%), Positives = 61/211 (28%), Gaps = 1/211 (0%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
+ +++ + +A ++Q + + ++ L + + Y G ++ A +
Sbjct: 408 DLGDIYILKGEPWEATLLYSQVEKTRKRRPLGYEAKLRNGKLSYFKGDFELAQGHLDILK 467
Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
D + + + + + + + +
Sbjct: 468 EATTREIANDAMNLSLLIRDNTALDMDTTNSAMKAYAGVELLMFQHKDKEALDKLVEMEK 527
Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA-L 240
+ + LK ++ I + ++ + A++A + + Y L
Sbjct: 528 KYKDHSLKDEILWSKSKLLLKMAKFQETIEVLEQIVKQHGQDILADDAHFTIGKIYEEYL 587
Query: 241 ALMDEAREVVSLIQERYPQGYWARYVETLVK 271
++A+E ++P + +
Sbjct: 588 KNPEKAKEYYRNHLTKFPGSIYVVEARKRFR 618
>gi|148657770|ref|YP_001277975.1| cold-shock protein, DNA-binding [Roseiflexus sp. RS-1]
gi|148569880|gb|ABQ92025.1| Cold-shock protein, DNA-binding [Roseiflexus sp. RS-1]
Length = 1555
Score = 40.5 bits (92), Expect = 0.24, Method: Composition-based stats.
Identities = 25/223 (11%), Positives = 66/223 (29%), Gaps = 9/223 (4%)
Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
+ + V R E++ KAV + + ++SKA + + P A+ S
Sbjct: 413 SSEGQKGPIAVRVALYRTLEEMFAKAVEYANDGDYSKAIAFVKKVLDARPNFPSAQDSYE 472
Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
+G + + + AQ++RD +
Sbjct: 473 KWREYARVSGIPKGS---------NPYARAKRVQLVEKDLERAAQLLRDAIRQGDNVESA 523
Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
++ ++ ++ + + + + + +Y G++ AI L
Sbjct: 524 VKDLAALLVQLGRPDEAIQVLEKNRSRISNQQSVDNMLINFYQNAGQHDKAISLLHKQLQ 583
Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
+ + + ++ Y+ A + ++ P
Sbjct: 584 QANTETKKAQILWQIAIGYLRKEDYVRAEQTFQELRRAQPDNK 626
>gi|225619426|ref|YP_002720652.1| cAMP-binding protein [Brachyspira hyodysenteriae WA1]
gi|225214245|gb|ACN82979.1| cAMP-binding protein [Brachyspira hyodysenteriae WA1]
Length = 328
Score = 40.5 bits (92), Expect = 0.24, Method: Composition-based stats.
Identities = 17/221 (7%), Positives = 56/221 (25%), Gaps = 17/221 (7%)
Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
S +Y + K + + A + + + ++
Sbjct: 118 ENDISEEGQDPLEGLYGIGEFYFKNKKYRNALYAYKRYIQYADEDSAFYNTVKEKIEECK 177
Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
+ + + + +Y + + + L+ + +
Sbjct: 178 DELDITDDSDIAPPVSNAPVSNAKAQTKATINDPAYNKAVELYNNNDYV--NSLKAFNNL 235
Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
++ + +G+ Y +Y A + Y + +
Sbjct: 236 IKSSDTAV---------------AENSIFYMGKCYYNINKYDNASTVLLSAIKKYPKSSN 280
Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
+EA+ L ++ A +A+ + P +++
Sbjct: 281 VKEAILFLAKSCEASGNKTKAKAYYQKVISMPPMDNFSKEA 321
>gi|197335090|ref|YP_002155725.1| Tol system periplasmic component YbgF [Vibrio fischeri MJ11]
gi|197316580|gb|ACH66027.1| Tol system periplasmic component YbgF [Vibrio fischeri MJ11]
Length = 257
Score = 40.5 bits (92), Expect = 0.24, Method: Composition-based stats.
Identities = 11/92 (11%), Positives = 29/92 (31%)
Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
F + ++ + + + +Y+D+ +A+ +L E
Sbjct: 164 FVTAYPDSVYSSNAHYWLGQLYFAQKNDVEAAKSFAKVVSYTDSNKRADALLKLGEVAKR 223
Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETLVK 271
A++ + YP A+ + +K
Sbjct: 224 NNNDAAAKKYYQKVVSEYPDSTTAKTAASKLK 255
>gi|194221768|ref|XP_001489102.2| PREDICTED: similar to intraflagellar transport 88 homolog [Equus
caballus]
Length = 825
Score = 40.5 bits (92), Expect = 0.24, Method: Composition-based stats.
Identities = 20/212 (9%), Positives = 47/212 (22%), Gaps = 6/212 (2%)
Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD---FPFAGVARKSLLMSAFVQYSAG 108
+D + K ++ KA E++ + R+ A A
Sbjct: 480 SDRYNPSALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYKKLNRLDEAL 539
Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
Q Y + + + L + + +
Sbjct: 540 DCFLKLHAILRNSAQVLYQIAHVYELMEDPNQAIEWLMQLISVVPTDSRALSKLGELYDS 599
Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
+ + +G YY+ AI F+ +
Sbjct: 600 EGDKSQAFQYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAIQYFERASLIQPTQVKWQ- 658
Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQG 260
+ + +A + I ++P+
Sbjct: 659 --LMVASCFRRSGNYQKALDTYKDIHRKFPEN 688
Score = 37.1 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 22/203 (10%), Positives = 59/203 (29%), Gaps = 7/203 (3%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
KA+ +L++++F++A E + A + L + + + +
Sbjct: 421 NKAITYLRQKDFNQAVETLKMFEKKDSRVKSAAATNLSFLYYLENEFAQASSYADLAVNS 480
Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVP----YDQRATKLMLQYMSRIVERYTNSPYVKG 177
+Y S + + + + + + L + ++
Sbjct: 481 DRYNPSALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYKKLNRLDEALD 540
Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
+ A +I Y + AI +++ A+++L E Y
Sbjct: 541 CFLKLHAILRNSAQVLYQIAHVYELMEDPNQAIEWLMQLISVVPTDS---RALSKLGELY 597
Query: 238 VALALMDEAREVVSLIQERYPQG 260
+ +A + +P
Sbjct: 598 DSEGDKSQAFQYYYESYRYFPSN 620
>gi|330828309|ref|YP_004391261.1| TPR domain-containing protein [Aeromonas veronii B565]
gi|328803445|gb|AEB48644.1| TPR domain protein [Aeromonas veronii B565]
Length = 263
Score = 40.5 bits (92), Expect = 0.24, Method: Composition-based stats.
Identities = 24/198 (12%), Positives = 56/198 (28%), Gaps = 14/198 (7%)
Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
+A L + + + + + + Q A+
Sbjct: 67 QAELQQQVDSLQGEVSELRGQLEQQTYQMEQSQERQRQLYQELDKVASSQQAAPAAPAPA 126
Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
+ +Y ++ ++ + +++Y NS YV A +++
Sbjct: 127 AATPAAAANYSTNQDENQAYDAAVNMVLKEKNYDKAIPAFQGFIKQYPNSGYVPNAHYWL 186
Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242
G+ +G+ A +F V YS + +A+ +L
Sbjct: 187 --------------GQLLFNKGDRAGASAQFSTVANKYSKSPKRADALLKLGMLAQLDGK 232
Query: 243 MDEAREVVSLIQERYPQG 260
EA+ + + YP
Sbjct: 233 KTEAKSFYEQVIKGYPNT 250
Score = 37.9 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 16/87 (18%), Positives = 27/87 (31%), Gaps = 2/87 (2%)
Query: 185 GRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244
LK Y AIP FQ + Y ++ + A L +
Sbjct: 138 TNQDENQAYDAAVNMVLKEKNYDKAIPAFQGFIKQYPNSGYVPNAHYWLGQLLFNKGDRA 197
Query: 245 EAREVVSLIQERYPQGYWARYVETLVK 271
A S + +Y + + + L+K
Sbjct: 198 GASAQFSTVANKYSKSP--KRADALLK 222
>gi|254564757|ref|XP_002489489.1| Subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C) [Pichia
pastoris GS115]
gi|238029285|emb|CAY67208.1| Subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C) [Pichia
pastoris GS115]
gi|328349917|emb|CCA36317.1| anaphase-promoting complex subunit 3 [Pichia pastoris CBS 7435]
Length = 693
Score = 40.5 bits (92), Expect = 0.24, Method: Composition-based stats.
Identities = 21/211 (9%), Positives = 47/211 (22%), Gaps = 3/211 (1%)
Query: 40 RQSSRDVYLDSVTDVRYQREVY---EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
+S + VT +Y +A + + KA F
Sbjct: 344 NNNSDFRNFNEVTSENELIVLYGRIARAYKAFCQYDCFKAIRLFTSLPEHVVDMPWVLAK 403
Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
L F + + + + E +++ + K
Sbjct: 404 LGRLHFEIVNYEQSEFYFQKLRQIDRTRVEDMEYYSTLLWHLHKESELSYLSHELYQIDK 463
Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
Q I ++ + + A + + F+
Sbjct: 464 YAPQTWVTIGNLFSLNRDNEEAVRCFQKATQLDQNFAYAYTLQGHEHVANDSFENAFESF 523
Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAR 247
S + A+ L ++ L +A
Sbjct: 524 RYALSIDKRHYNALYGLGMVHLKLGDFTKAE 554
>gi|206901168|ref|YP_002250157.1| TPR repeat protein [Dictyoglomus thermophilum H-6-12]
gi|206740271|gb|ACI19329.1| TPR repeat protein [Dictyoglomus thermophilum H-6-12]
Length = 153
Score = 40.5 bits (92), Expect = 0.24, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 33/78 (42%)
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
E R G+Y AI ++ L +Y +E+A++A + Y +A E +
Sbjct: 69 YEKARDLYYEGKYKEAIEAYRKFLKDYPKSEYADDAQYEIALCYEFTEDYKKAIEEYEKL 128
Query: 254 QERYPQGYWARYVETLVK 271
+ YP + ++ ++
Sbjct: 129 IKNYPNSEYVEAAKSSIE 146
>gi|163757156|ref|ZP_02164258.1| hypothetical protein KAOT1_00785 [Kordia algicida OT-1]
gi|161322884|gb|EDP94231.1| hypothetical protein KAOT1_00785 [Kordia algicida OT-1]
Length = 1012
Score = 40.5 bits (92), Expect = 0.24, Method: Composition-based stats.
Identities = 21/233 (9%), Positives = 61/233 (26%), Gaps = 15/233 (6%)
Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
+ YQ+ + +A+ + + +A E+F++ ++ A ++ A
Sbjct: 414 EASKKYSDKETYQKVAFYRAIELFNDNKYQEALEFFDKSLKENESAEYTARATFWKAETN 473
Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
Y Y A + + ++ + + +
Sbjct: 474 YLLDNYDLALEGFKSFANANITDTEEAQTIDYNLAYTYFKQKEYASAITNFEKFINNNAD 533
Query: 165 ---------------IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
+K + + + Y G+
Sbjct: 534 DTGRINDSYLRLGDSHFVTSNYGDAIKAYDKAIALKGVDEDYAYFQKAISYGFTGKTNTK 593
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
I + + Y + ++A+ L Y+ + + + + YP+ +
Sbjct: 594 IDELEKFINKYRKSSLRDDALYELGNTYINEEKTVKGLDTYAKMVSEYPKSSY 646
Score = 35.5 bits (79), Expect = 7.9, Method: Composition-based stats.
Identities = 18/206 (8%), Positives = 52/206 (25%), Gaps = 23/206 (11%)
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
Y A + K++ ++ A F + + + + + Y
Sbjct: 505 YNLAYTYFKQKEYASAITNFEKFINNNADDTGRINDSYLRL---------GDSHFVTSNY 555
Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
+ + T + + + + +Y S A +
Sbjct: 556 GDAIKAYDKAIALKGVDEDYAYFQKAISYGFTGKTNTKIDELEKFINKYRKSSLRDDALY 615
Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
E+G Y+ + V + + +++ Y + + + + +
Sbjct: 616 --------------ELGNTYINEEKTVKGLDTYAKMVSEYPKSSYVPKTILKQGLINYNS 661
Query: 241 ALMDEAREVVSLIQERYPQGYWARYV 266
A + ++P A
Sbjct: 662 GKNQVALTKFRSVVSKFPNTEEAIQA 687
Score = 35.5 bits (79), Expect = 8.9, Method: Composition-based stats.
Identities = 23/219 (10%), Positives = 53/219 (24%), Gaps = 13/219 (5%)
Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
+ Y+ + K++++ A + FN+ L ++
Sbjct: 269 KEYKGKKRRWNNTDFYQLGYAYYKQEDYENAIKQFNKIIDGSNSVAQNAYYHLGECYLNT 328
Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYL-------VGMSYAQMIRDVPYDQRATKLM 158
+ A + + + + Y + +
Sbjct: 329 DKKQQALNAFRNASQMDFDLKIQEDAGLNYARLSYEIGNPYESVPSVLTSYLKKYPDTEH 388
Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK------RGEYVAAIPR 212
+ ++ + A + + + KE + + +Y A+
Sbjct: 389 QAELEELLVSSYITSKDYEAALNLLEASKKYSDKETYQKVAFYRAIELFNDNKYQEALEF 448
Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
F L AE+ A E L D A E
Sbjct: 449 FDKSLKENESAEYTARATFWKAETNYLLDNYDLALEGFK 487
>gi|163783489|ref|ZP_02178480.1| hypothetical protein HG1285_08749 [Hydrogenivirga sp. 128-5-R1-1]
gi|159881253|gb|EDP74766.1| hypothetical protein HG1285_08749 [Hydrogenivirga sp. 128-5-R1-1]
Length = 850
Score = 40.5 bits (92), Expect = 0.24, Method: Composition-based stats.
Identities = 28/211 (13%), Positives = 55/211 (26%), Gaps = 7/211 (3%)
Query: 63 KAVLFLKEQNFSKAYEYFNQC-SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
A +KE ++ +AYE Q R+ F + L + + E
Sbjct: 356 AAYSAIKEGDYQRAYESIRQVKDRNKEFYLWLLEVLYWLGRDEEMEKTLSEIKDKYPELY 415
Query: 122 TQYPE------SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
+Y K ++ + + +L+ + R +
Sbjct: 416 KEYKGWLAFRKEKWLEAYRLFDDPYHKALALFNAGRYSEVIKVLKGKEDLKSRLLKAKSA 475
Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
+ EI + E +A+ R+ +
Sbjct: 476 ISIGNGALARKFLTEESGEEIYLMGMSFFIEGKYREAIAYFKRLLDRGEFKSKALLRIAD 535
Query: 236 AYVALALMDEAREVVSLIQERYPQGYWARYV 266
+Y L + A+E+ I YP A
Sbjct: 536 SYYNLGNYERAKELYKEILTFYPDSTEAFDA 566
Score = 35.5 bits (79), Expect = 7.1, Method: Composition-based stats.
Identities = 20/193 (10%), Positives = 47/193 (24%), Gaps = 6/193 (3%)
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
Y KA+ +S+ + K+ + + + GEE
Sbjct: 440 YHKALALFNAGRYSEVIKV---LKGKEDLKSRLLKAKSAISIGNGALARKFLTEESGEEI 496
Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
+ + R + ++ Y + Y + F
Sbjct: 497 YLMGMSFFIEGKYREAIAYFKRLLDRGEFKSKALLRIADSYYNLGNYERAKELYKEILTF 556
Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
Y A + + + F+ + + + +L Y+
Sbjct: 557 YPDSTEAFDATLALAQIELQKPTKDLEKLVRDFE---RKFPGSPMITDLKYQLANLYIKE 613
Query: 241 ALMDEAREVVSLI 253
EAR ++ +
Sbjct: 614 GRRSEARRILEEL 626
>gi|312383966|gb|EFR28827.1| hypothetical protein AND_02731 [Anopheles darlingi]
Length = 809
Score = 40.5 bits (92), Expect = 0.25, Method: Composition-based stats.
Identities = 19/204 (9%), Positives = 56/204 (27%), Gaps = 8/204 (3%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
V F+ + ++ A F + A ++ + +
Sbjct: 465 NSGVCFMMKNDYESAKLMFTSALDIDSTSFEALYNIGLIFTKLADHNSALLYFRKIISSL 524
Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ-----RATKLMLQYMSRIVERYTNSPYVK 176
+ + + + + Y Q + ++Q + + E
Sbjct: 525 GHEQHPEVLYQIAHQYDLLGDVSTALEYYLQLLSVVQQDNKIIQRIGELYEADNERQQAY 584
Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
A+ + +Y++ AI ++ + + + R+
Sbjct: 585 HYHHESYRIYPIEASVINWLCSHYIELQVVEKAIGFYEKAVLRNPQDPYY---LLRIAGC 641
Query: 237 YVALALMDEAREVVSLIQERYPQG 260
Y + ++ ++ +I E YP+
Sbjct: 642 YRRIGNQQKSMQLFRMIHEHYPEN 665
>gi|291389665|ref|XP_002711414.1| PREDICTED: transmembrane and tetratricopeptide repeat containing
2-like [Oryctolagus cuniculus]
Length = 836
Score = 40.5 bits (92), Expect = 0.25, Method: Composition-based stats.
Identities = 21/228 (9%), Positives = 56/228 (24%), Gaps = 8/228 (3%)
Query: 35 LVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR 94
++ +Y L+ ++ + +A + + + P +
Sbjct: 584 FFKCSEIPDENLKDPHAHKSSVTSCLYNLGKLYHEQGRYEEALSVYKEAIQKMPRQFAPQ 643
Query: 95 KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
M K +A E + + Y + + + +A
Sbjct: 644 SLYNMMGEAYMRLSKLPEAEHWYMESLRSKTDHIPAHLTYGKLLALTGRKSEAEKFFLKA 703
Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
+ L + ++ AR + AA+ + ++
Sbjct: 704 IE--LDPTKGNCYMHYGQFLLEEARLVEAAEMAKKAAELDSTEFDVVFNAAHMLRQASLN 761
Query: 215 LVLANYSD-----AEHAEEAMARLVEAYVALALMDEAR-EVVSLIQER 256
Y D + A+ L + +A + +Q +
Sbjct: 762 EAAEKYYDLAARLRPNYPAALMNLGAILHLNGRLQKAEANYLRALQLK 809
>gi|317153422|ref|YP_004121470.1| tol-pal system protein YbgF [Desulfovibrio aespoeensis Aspo-2]
gi|316943673|gb|ADU62724.1| tol-pal system protein YbgF [Desulfovibrio aespoeensis Aspo-2]
Length = 300
Score = 40.5 bits (92), Expect = 0.25, Method: Composition-based stats.
Identities = 27/260 (10%), Positives = 62/260 (23%), Gaps = 18/260 (6%)
Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDV----RYQREVYEKAVLFLKEQN- 72
++ K++L + + +G ++ R E++ LK +
Sbjct: 3 KIIKYSLVVASIFILMATLGCASKTDMQTLQSERQQDLGRIRQLEAELEESKQQLKSEIE 62
Query: 73 ------FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126
KA + + + R L + + Q E
Sbjct: 63 QSQSPVREKAADMWAEIQALRADFAKLRGDLETMNMRLDTQVGESNSTMTMAVLADQLHE 122
Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
+ V V M+ + R + +
Sbjct: 123 IEFVLENQLQVDMTKVRKERAATLGTSGVAPGAA-------APPQAAQDEDEPGETAATS 175
Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
+ A + K ++ A + + A A+ + Y L A
Sbjct: 176 SDPAKALYDKAYALYKEDQFEKARSYWAEFTDTFKSHSFAPSAVFWQGQCYFKLKDYSRA 235
Query: 247 REVVSLIQERYPQGYWARYV 266
+ + E+Y + +
Sbjct: 236 VILFEDVIEKYAKSAKYKAA 255
>gi|208435167|ref|YP_002266833.1| paralysed flagella protein [Helicobacter pylori G27]
gi|208433096|gb|ACI27967.1| paralysed flagella protein [Helicobacter pylori G27]
Length = 791
Score = 40.5 bits (92), Expect = 0.25, Method: Composition-based stats.
Identities = 9/53 (16%), Positives = 17/53 (32%)
Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
NY + EA+ + +A +A I Y +A + +
Sbjct: 250 KNYPTDPNIPEALYYVAKALDENNNYKQAMRYYKRILLEYKNSRYAPLAQMRL 302
>gi|115383820|ref|XP_001208457.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114196149|gb|EAU37849.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 748
Score = 40.5 bits (92), Expect = 0.25, Method: Composition-based stats.
Identities = 24/219 (10%), Positives = 54/219 (24%), Gaps = 27/219 (12%)
Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106
++ ++Y + S A E V +
Sbjct: 120 IVEDEEGAVLMLQLYNQGQEL------SGAQELIEGTVLIVKEPYVKVMADGNYGIRVDH 173
Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
+ + D S+ + + ++Q + LQ SR +
Sbjct: 174 VSDVMFLPECDDRIPLSWRTRIAHDDG----SPSFWKERGNAMFNQGNYRGALQCYSRTL 229
Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
+ R + + + + + +
Sbjct: 230 VTSPSPELAMTTRLNRALTFLRSHQFDAALAEAETVLHV-----------------SPIS 272
Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
E+A+ R +A L ++ + LI E YP+ A+
Sbjct: 273 EKALFRKSQALYYLGRFQQSYDTHKLIAEHYPENEMAKR 311
>gi|218709112|ref|YP_002416733.1| hypothetical protein VS_1118 [Vibrio splendidus LGP32]
gi|218322131|emb|CAV18245.1| Hypothetical protein VS_1118 [Vibrio splendidus LGP32]
Length = 265
Score = 40.5 bits (92), Expect = 0.25, Method: Composition-based stats.
Identities = 10/91 (10%), Positives = 27/91 (29%)
Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
F + + + + +Y D+ +A+ +L +
Sbjct: 175 FQKDFPDSTFTPNTHYWLGQLYFAKKQDKEAVKSFAAVVSYKDSNKRSDALVKLGDIATR 234
Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETLV 270
+A++ + YP A+ +T +
Sbjct: 235 NNNATQAKKYYQQVVTEYPNSASAKVAKTHL 265
Score = 37.5 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 28/79 (35%), Gaps = 3/79 (3%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
LK+ +Y AI FQ ++ D+ L + Y A EA + +
Sbjct: 152 YQNAVDMILKQRDYTGAIAAFQKFQKDFPDSTFTPNTHYWLGQLYFAKKQDKEAVKSFAA 211
Query: 253 IQERYPQGYWARYVETLVK 271
+ Y + + LVK
Sbjct: 212 VVS-YKDSN--KRSDALVK 227
>gi|189425590|ref|YP_001952767.1| hypothetical protein Glov_2533 [Geobacter lovleyi SZ]
gi|189421849|gb|ACD96247.1| TPR repeat-containing protein [Geobacter lovleyi SZ]
Length = 1025
Score = 40.5 bits (92), Expect = 0.25, Method: Composition-based stats.
Identities = 15/233 (6%), Positives = 53/233 (22%), Gaps = 21/233 (9%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + + S+ + F + ++ ++E+ + + + +A
Sbjct: 1 MTRRVVIPVLSLLLLFNFCSSGFAGKNE----------AENLWEEGSKATEVKRYPEAIR 50
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
F + + + Y Q + +
Sbjct: 51 LFERSLALCGYD---VDCRWANLNGLGVVYDALDQNERARSYYEQALQLSRQRNNPEDLA 107
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
+ + + L ++ ++ Y + +
Sbjct: 108 NDLLNLGALLYKGLEQHQRALPFLEESLKLYRQIRKADETALLL--------FHTGTVKT 159
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
+ E + + + + A+A L +A ++A
Sbjct: 160 VLGRYPEAIRDLQESLGINRRLRNNAGISNALATLGQASNMSGNYNQAAGYYE 212
>gi|91201683|emb|CAJ74743.1| unknown protein [Candidatus Kuenenia stuttgartiensis]
Length = 237
Score = 40.5 bits (92), Expect = 0.25, Method: Composition-based stats.
Identities = 32/246 (13%), Positives = 74/246 (30%), Gaps = 27/246 (10%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
++ L+ + ++G ++ +K + F +++ + +A +
Sbjct: 1 MFIRKLSYLSLLFCILIIGCGNKADSFN---------------KKGLSFFEQKKYDEAID 45
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
F + A L ++ + + + E + P+ + Y+
Sbjct: 46 AFKKALEINKNHYDAHYGLGVAYYTKGMIDESLTELKRAIELNPEEPKVRYNIAFAYMAK 105
Query: 139 MSYAQMIRDVPYDQRATK---------LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
+ I++ Y+S N A +L
Sbjct: 106 QMTMEAIQEYKTAIDLFSSKKDVKKEAEAHLYLSVAYSLMENHDEALLACKKAIALNPEL 165
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
+G Y K Y AI + + AE+A + L Y L +++EA
Sbjct: 166 EDGHYFLGVCYYKNNMYDEAIAALKKTIMLNPK---AEKAHSVLHVIYDKLGMVEEATSE 222
Query: 250 VSLIQE 255
++Q+
Sbjct: 223 RFILQQ 228
>gi|218960841|ref|YP_001740616.1| hypothetical protein; putative signal peptide [Candidatus
Cloacamonas acidaminovorans]
gi|167729498|emb|CAO80409.1| hypothetical protein; putative signal peptide [Candidatus
Cloacamonas acidaminovorans]
Length = 834
Score = 40.5 bits (92), Expect = 0.25, Method: Composition-based stats.
Identities = 21/237 (8%), Positives = 61/237 (25%), Gaps = 24/237 (10%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAV-LFLKEQNFSKAYE 78
KF I + + + E + + + + ++KA +
Sbjct: 1 MKFRDIIICLLCLSGIFACEVNTMFNARNYFKSAQARP--LTSNGRPNAQAIDEYTKAIK 58
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+ ++ + A Y G ++ + +
Sbjct: 59 KCGKIISTDKKGKRVEEAYYLMAKSLYYKGN-------SAFQAKDQFQNLVIRFPDSKYV 111
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
I + + K + + + + A F +
Sbjct: 112 PEAYIYIAKILRETNQPKEAEKLLDEFLRNPKYRKHHPEALFVL--------------AD 157
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
+ +K +++ A + ++ + + EA + Y D++ E +Q+
Sbjct: 158 FAIKDKDFIKAQHYLERIITEFPKTKEYREAYFLFGKNYYEQKDYDKSLEAFKKMQK 214
Score = 40.2 bits (91), Expect = 0.32, Method: Composition-based stats.
Identities = 29/240 (12%), Positives = 64/240 (26%), Gaps = 17/240 (7%)
Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQN-FSKAYEYFNQCSRDFPFAGVARKSL 97
+ + R + Y A + N +A + F FP + ++
Sbjct: 56 AIKKCGKIISTDKKGKRVEEAYYLMAKSLYYKGNSAFQAKDQFQNLVIRFPDSKYVPEAY 115
Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV------------YYLVGMSYAQMI 145
+ A + + ++A L +E++ K+ ++ Y + I
Sbjct: 116 IYIAKILRETNQPKEAEKLLDEFLRNPKYRKHHPEALFVLADFAIKDKDFIKAQHYLERI 175
Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
+ + + + A + R ++E Y
Sbjct: 176 ITEFPKTKEYREAYFLFGKNYYEQKDYDKSLEAFKKMQKARGIDKTIKLEGTYYIGLNEL 235
Query: 206 YVAAIPRFQLVLANYSDAEHAEE----AMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
+ + +E + A AL EAR + I + YP+
Sbjct: 236 ELGQAEKALKTAKGLIKSESRPDKIPFVRLLKARAQFALGDTTEARTEIEFITKNYPRTE 295
Score = 39.4 bits (89), Expect = 0.51, Method: Composition-based stats.
Identities = 24/174 (13%), Positives = 47/174 (27%), Gaps = 4/174 (2%)
Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
V S +T Y + I + +
Sbjct: 19 CEVNTMFNARNYFKSAQARPLTSNGRPNAQAIDEYTKAIKKCGKIISTDKKGKRVEEAYY 78
Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAK----EVEIGRYYLKRGEYVAAIPRFQLV 216
M++ + NS + +F V R + + I + + + A
Sbjct: 79 LMAKSLYYKGNSAFQAKDQFQNLVIRFPDSKYVPEAYIYIAKILRETNQPKEAEKLLDEF 138
Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
L N +H EA+ L + + +A+ + I +P+ R L
Sbjct: 139 LRNPKYRKHHPEALFVLADFAIKDKDFIKAQHYLERIITEFPKTKEYREAYFLF 192
Score = 39.0 bits (88), Expect = 0.71, Method: Composition-based stats.
Identities = 17/125 (13%), Positives = 35/125 (28%)
Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
+ + M A+ + T I E G+ A
Sbjct: 17 FACEVNTMFNARNYFKSAQARPLTSNGRPNAQAIDEYTKAIKKCGKIISTDKKGKRVEEA 76
Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
+ Y K A +FQ ++ + D+++ EA + + EA +++
Sbjct: 77 YYLMAKSLYYKGNSAFQAKDQFQNLVIRFPDSKYVPEAYIYIAKILRETNQPKEAEKLLD 136
Query: 252 LIQER 256
Sbjct: 137 EFLRN 141
>gi|197118045|ref|YP_002138472.1| TPR domain-containing protein [Geobacter bemidjiensis Bem]
gi|197087405|gb|ACH38676.1| TPR domain lipoprotein [Geobacter bemidjiensis Bem]
Length = 250
Score = 40.5 bits (92), Expect = 0.25, Method: Composition-based stats.
Identities = 35/252 (13%), Positives = 68/252 (26%), Gaps = 15/252 (5%)
Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
+ I S + F G Y+ F E N++ A ++
Sbjct: 5 IPIMLSFVLLFAAGCALNQGDKNRSIY---------HYQMGQSFYAENNYTGALLELSEA 55
Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
+ P L ++ + + + ++ ++ +++N V YL +
Sbjct: 56 EKLTPRDPDLLNLLGLTYYRKGRYDLAEAKYLKAIDHKERFSDARNNLGVNYLEMKRWDD 115
Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
I Q Q + + KG K R L
Sbjct: 116 AIEQFKLVQDDIF--YQGQDGVAINLGLAYLGKGEYQQALTVLRNEVGKNGSDPRIRLNL 173
Query: 204 GEYVAAIPRFQLVLANYSDAEHAEE----AMARLVEAYVALALMDEAREVVSLIQERYPQ 259
G A+ + +L + Y A A L A + L D A+ + P
Sbjct: 174 GRVYFALQKNELAVEEYQKALQLNRSYASAYYHLGLAQMKLKDADAAKSAFQDVVRLAPD 233
Query: 260 GYWARYVETLVK 271
+ ++
Sbjct: 234 SEIGQLSREYLE 245
>gi|253999427|ref|YP_003051490.1| type IV pilus biogenesis/stability protein PilW [Methylovorus sp.
SIP3-4]
gi|253986106|gb|ACT50963.1| type IV pilus biogenesis/stability protein PilW [Methylovorus sp.
SIP3-4]
Length = 251
Score = 40.5 bits (92), Expect = 0.25, Method: Composition-based stats.
Identities = 25/243 (10%), Positives = 59/243 (24%), Gaps = 11/243 (4%)
Query: 28 FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87
+ + L G Q ++ + R E + + + A E F + R
Sbjct: 5 LMVVLIGLAGCAEQQAQPYSAGETSARERARVHTELGAGYFAQNQMAIALEEFTEAIR-I 63
Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147
+ + L + + I +Y +L +
Sbjct: 64 DGSYAMAYNGLGLVYGALREDAKADSNFKRALQIEPNNSESRNNYGSFLCSRNRIDESIV 123
Query: 148 VPYD------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
+ + + + +G + L ++
Sbjct: 124 QFTEAVKNPLYATPGVAYMNAGICALKKKDEKSAEGYLEKALQAQPLLQTAAYQLATIQF 183
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
RG+ A + L N + + + L D L++++YP
Sbjct: 184 NRGQVGIARNTLKNALVNNPG----PDTLWLGIRIERILGDRDAEASYALLLRKKYPNSE 239
Query: 262 WAR 264
+
Sbjct: 240 QTK 242
>gi|75760719|ref|ZP_00740743.1| ABC transporter substrate-binding protein [Bacillus thuringiensis
serovar israelensis ATCC 35646]
gi|228903490|ref|ZP_04067615.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
thuringiensis IBL 4222]
gi|74491803|gb|EAO54995.1| ABC transporter substrate-binding protein [Bacillus thuringiensis
serovar israelensis ATCC 35646]
gi|228856175|gb|EEN00710.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
thuringiensis IBL 4222]
Length = 273
Score = 40.5 bits (92), Expect = 0.25, Method: Composition-based stats.
Identities = 13/73 (17%), Positives = 24/73 (32%)
Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
+Q+ K LT S ++ L + + L E+ EKA L+++
Sbjct: 1 MFQMKKLLLTALISTSIFGLAACGGKDKDEKKLVVGASNVPHAEILEKAKPLLEKKGIEL 60
Query: 76 AYEYFNQCSRDFP 88
+ F
Sbjct: 61 EVKKFQDYVLPNK 73
>gi|291190309|ref|NP_001167232.1| intraflagellar transport protein 88 homolog [Salmo salar]
gi|223648786|gb|ACN11151.1| Intraflagellar transport protein 88 homolog [Salmo salar]
Length = 845
Score = 40.5 bits (92), Expect = 0.25, Method: Composition-based stats.
Identities = 20/203 (9%), Positives = 55/203 (27%), Gaps = 7/203 (3%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
KA+ +L++++F +A E + A + L + +
Sbjct: 419 NKAITYLRQRDFKQAVETLKTFEKKDSRVKSAAATNLSFLYFLEKDYDQADRYADLAMTA 478
Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVP----YDQRATKLMLQYMSRIVERYTNSPYVKG 177
+Y + ++ + + + + + L + +R
Sbjct: 479 DRYNPAALINKGNTVFVKKDYEKAAEFYKEALRNDSSCTEALYNLGLTYKRLGRLEESLD 538
Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
+ A ++ + + AI ++ +A+L E Y
Sbjct: 539 CFLKLHAILRNSAQVMWQLANLFEMLEDPHQAIEWLMQLITVTPTDPQV---LAKLGELY 595
Query: 238 VALALMDEAREVVSLIQERYPQG 260
+ +A + +P
Sbjct: 596 DSEGDKSQAFQYYQESFRYFPSN 618
Score = 38.6 bits (87), Expect = 0.84, Method: Composition-based stats.
Identities = 22/213 (10%), Positives = 54/213 (25%), Gaps = 6/213 (2%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
D + K ++++ KA E++ + R+ A +L ++ +
Sbjct: 477 TADRYNPAALINKGNTVFVKKDYEKAAEFYKEALRNDSSCTEALYNLGLTYKRLGRLEES 536
Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY---DQRATKLMLQYMSRIVE 167
+ + + + Q I + +L + + +
Sbjct: 537 LDCFLKLHAILRNSAQVMWQLANLFEMLEDPHQAIEWLMQLITVTPTDPQVLAKLGELYD 596
Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
+ +G YY+ AI F+ +
Sbjct: 597 SEGDKSQAFQYYQESFRYFPSNIDVIEWLGAYYIDTQFCEKAIQYFERATLIQPTQVKWQ 656
Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
+ Y +A E I ++P+
Sbjct: 657 ---LMVASCYRRSGNYQKALETYKDIHRKFPEN 686
>gi|149918453|ref|ZP_01906943.1| Lytic transglycosylase [Plesiocystis pacifica SIR-1]
gi|149820753|gb|EDM80163.1| Lytic transglycosylase [Plesiocystis pacifica SIR-1]
Length = 796
Score = 40.5 bits (92), Expect = 0.25, Method: Composition-based stats.
Identities = 16/83 (19%), Positives = 35/83 (42%)
Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
+ + R G+Y A RF+ + ++ D +A++A + E++ + +EAR
Sbjct: 358 REVKSRYQAARGRYSAGKYSDAGTRFEALAKDHPDHSYADDAWIKAGESWESAGKAEEAR 417
Query: 248 EVVSLIQERYPQGYWARYVETLV 270
+ ++P G A +
Sbjct: 418 KAYESSLAKHPDGDMADEALRRL 440
>gi|15606983|ref|NP_214365.1| hypothetical protein aq_1989 [Aquifex aeolicus VF5]
gi|2984229|gb|AAC07758.1| putative protein [Aquifex aeolicus VF5]
Length = 853
Score = 40.5 bits (92), Expect = 0.25, Method: Composition-based stats.
Identities = 24/227 (10%), Positives = 58/227 (25%), Gaps = 21/227 (9%)
Query: 61 YEKAVLFLKE-QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
Y KA+ + ++ + A + + + + + + +E
Sbjct: 344 YRKALEYFEKAGKWKYAVYAALKLKDYEKAYEILKNVKDRDREYYRLLLEVLYSTDMEDE 403
Query: 120 YITQYPE-----SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
++ E K Y + Y + Y +
Sbjct: 404 FLKTLEEIAGKYPKLYKEYYGWYLFKKGNWLEAEKYFDNPYYKAVAYFNAGDYEKVLELL 463
Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ---------------LVLAN 219
+ V + + A +
Sbjct: 464 KDDNSYEARVLKAKAAISLGKGELARKFLYNETPEEVYLTGLSYFIDGEYEKAIPYFEKL 523
Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
+ E+ +A+ +L ++Y L ++AR + +LI +Y Q A+
Sbjct: 524 TQNEEYRLKALLKLADSYYNLGQKEKARAIYTLILSKYSQNPEAKEA 570
Score = 35.9 bits (80), Expect = 6.4, Method: Composition-based stats.
Identities = 25/196 (12%), Positives = 49/196 (25%), Gaps = 6/196 (3%)
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
Y KAV + ++ K E D + K+ + + + EE
Sbjct: 444 YYKAVAYFNAGDYEKVLEL---LKDDNSYEARVLKAKAAISLGKGELARKFLYNETPEEV 500
Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
+ + + KL Y + + + Y
Sbjct: 501 YLTGLSYFIDGEYEKAIPYFEKLTQNEEYRLKALLKLADSYYNLGQKEKARAIYTLILSK 560
Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
Y + A V E + F+ Y ++ E +L Y
Sbjct: 561 YSQNPEAKEALLGVAQIEIEAPTKELEKIVKDFE---EKYPNSPLLPELKLQLARIYAKE 617
Query: 241 ALMDEAREVVSLIQER 256
EA+ ++ +
Sbjct: 618 GRKVEAQFILRKLVNN 633
>gi|302130602|ref|ZP_07256592.1| tol-pal system protein YbgF [Pseudomonas syringae pv. tomato NCPPB
1108]
Length = 248
Score = 40.5 bits (92), Expect = 0.26, Method: Composition-based stats.
Identities = 16/111 (14%), Positives = 36/111 (32%), Gaps = 1/111 (0%)
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI-GRYYLKRGEYVAAIPRFQLVLANY 220
I + + F + A G L +G+ A F V Y
Sbjct: 136 FDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGDLQGAGQAFAKVSQQY 195
Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+++ +L + L D+ + ++ + +YP A+ + ++
Sbjct: 196 PKHAKVPDSLYKLADVERRLGHTDKVKGILQQVVAQYPGTSAAQLAQRDLQ 246
Score = 38.6 bits (87), Expect = 0.96, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 32/83 (38%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
D ++ YE A +K ++F KA + F R +P + A + V + G
Sbjct: 121 EPPDPAKEKLYYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGD 180
Query: 110 YQQAASLGEEYITQYPESKNVDY 132
Q A + QYP+ V
Sbjct: 181 LQGAGQAFAKVSQQYPKHAKVPD 203
Score = 38.2 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 14/67 (20%), Positives = 28/67 (41%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
E +K ++ A F L Y ++ +A A L E +A + A + +
Sbjct: 131 YYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGDLQGAGQAFAK 190
Query: 253 IQERYPQ 259
+ ++YP+
Sbjct: 191 VSQQYPK 197
>gi|108563643|ref|YP_627959.1| paralysed flagella protein [Helicobacter pylori HPAG1]
gi|107837416|gb|ABF85285.1| paralysed flagella protein [Helicobacter pylori HPAG1]
Length = 801
Score = 40.5 bits (92), Expect = 0.26, Method: Composition-based stats.
Identities = 28/205 (13%), Positives = 55/205 (26%), Gaps = 17/205 (8%)
Query: 70 EQNFSKAYEYFNQ----CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP 125
++++ KA F + L + + I Q
Sbjct: 121 DRDYKKAIPLFVENDPKAKMWQIIGYDQNIPFLSKKDNAQKGLNFPIVIKDAQTPIIQEL 180
Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
+ N + A + D +A L+ +SR + Y + + K +
Sbjct: 181 DVNNKPLLTTKGYDLNAYLEAKKQMDSQAYFDALRTISRAFKNYPQTMFKKDLYLLEIIA 240
Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
QL K+ I + NY + EA+ + +A +
Sbjct: 241 LGQLGIKK-------------SLLIDIGTQWIKNYPTDPNIPEALYYVAKALDENNNYKQ 287
Query: 246 AREVVSLIQERYPQGYWARYVETLV 270
A I Y +A + +
Sbjct: 288 AMRYYKRILLEYKNSRYAPLAQMRL 312
>gi|15606922|ref|NP_214303.1| hypothetical protein aq_1896 [Aquifex aeolicus VF5]
gi|2984175|gb|AAC07708.1| hypothetical protein aq_1896 [Aquifex aeolicus VF5]
Length = 342
Score = 40.5 bits (92), Expect = 0.26, Method: Composition-based stats.
Identities = 22/204 (10%), Positives = 57/204 (27%), Gaps = 8/204 (3%)
Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK-----SLLMSAFVQYSAGKYQQ 112
+ Y+ +N+S+A F++ R P + + + +
Sbjct: 26 KVYYDLGTAAFAARNYSEAIANFHKALRANPDEPRIWNALGLAYMEAKEYKKAEESFKKA 85
Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
+ + + Y++++ E +
Sbjct: 86 LSINPNYSEARKNLGILYYKLGRYEEALKYLQEAANDEYYEKKHEAFYYLAKVYEAKQDL 145
Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232
++E+ + Y G+Y A ++ +L N + + +
Sbjct: 146 KNYVRYLEKAVAYNPNFVQAQLELAQAYENLGKYEEAEKIYKSLLLNGFNKPFLK---YK 202
Query: 233 LVEAYVALALMDEAREVVSLIQER 256
L E Y + ARE++ + +
Sbjct: 203 LAEVYYKKGDYERAREIIKELLYK 226
>gi|317013062|gb|ADU83670.1| paralysed flagella protein [Helicobacter pylori Lithuania75]
Length = 801
Score = 40.5 bits (92), Expect = 0.26, Method: Composition-based stats.
Identities = 9/53 (16%), Positives = 17/53 (32%)
Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
NY + EA+ + +A +A I Y +A + +
Sbjct: 260 KNYPTDPNIPEALYYVAKALDENNNYKQAMRYYKRILLEYKNSRYAPLAQMRL 312
>gi|207744074|ref|YP_002260466.1| hypothetical protein RSIPO_02260 [Ralstonia solanacearum IPO1609]
gi|206595478|emb|CAQ62405.1| conserved hypothetical protein [Ralstonia solanacearum IPO1609]
Length = 257
Score = 40.5 bits (92), Expect = 0.26, Method: Composition-based stats.
Identities = 26/204 (12%), Positives = 55/204 (26%), Gaps = 15/204 (7%)
Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
+N A + + L + K A + ++
Sbjct: 65 NSRNLIDAQNQIETLKSEVARLRGQNEQLQNTVDTLTKQQKDYYADLDARLKRFEPQQAT 124
Query: 129 NVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
G + K S V++Y SPY+ A+F++
Sbjct: 125 VDGRDGMVQPGEKDEYDAALKTFQGGDFKGAGNQFSAFVKKYPQSPYLPLAQFWL----- 179
Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
G + +Y + + + A EA+ ++ AR
Sbjct: 180 ---------GNALYAQRDYKGSTYVLENMARANPQHPKAPEALLQVATNQGESGQKAAAR 230
Query: 248 EVVSLIQERYPQGYWARYVETLVK 271
+ + + +YP A+ + +K
Sbjct: 231 KTLEAVVVQYPGTEQAKTASSRLK 254
>gi|124515767|gb|EAY57276.1| probable cellulose synthase subunit C [Leptospirillum rubarum]
gi|206602272|gb|EDZ38754.1| Probable cellulose synthase subunit C [Leptospirillum sp. Group II
'5-way CG']
Length = 335
Score = 40.5 bits (92), Expect = 0.26, Method: Composition-based stats.
Identities = 16/68 (23%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
+ Y+ K A ++ +L Y + EA+ L++AY+ D AR ++ +
Sbjct: 47 QKALYWEKHHRVDLAAATYRQILFLYPGDK---EALIGLIQAYLLEGKSDRARPLIRTFE 103
Query: 255 ERYPQGYW 262
+RYP+ +
Sbjct: 104 KRYPRSPY 111
>gi|163786667|ref|ZP_02181115.1| hypothetical protein FBALC1_15817 [Flavobacteriales bacterium
ALC-1]
gi|159878527|gb|EDP72583.1| hypothetical protein FBALC1_15817 [Flavobacteriales bacterium
ALC-1]
Length = 594
Score = 40.5 bits (92), Expect = 0.26, Method: Composition-based stats.
Identities = 26/229 (11%), Positives = 82/229 (35%), Gaps = 3/229 (1%)
Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
R ++++ + + A + + ++ F++A +++Q + + +++++ A
Sbjct: 360 RKSLKLNISEFQEAKVKLLLADILVLQEKFNEALIFYSQIQMNLKNSTISQEARFKVAKT 419
Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
Y G + A S + + + D + + +S + + +
Sbjct: 420 SYYKGDFDWAESQLKILKSSTSQLIANDALDLKLLISDNKYEDSTQTALKHYAKA--DLF 477
Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
+ + + G + + + + K+ +Y A + ++ +Y +
Sbjct: 478 AFQNKTDEAISLLDKILTEHKGESITDQTLFKQAKLFEKKKQYNKAEANYLEIIKDYRED 537
Query: 224 EHAEEAMARLVEAYVA-LALMDEAREVVSLIQERYPQGYWARYVETLVK 271
A++A L E Y LA ++A+++ I + + +
Sbjct: 538 ILADDAHYYLAELYNTFLAKPEDAKQLYEKIIFEFEDSIYFIEARKKFR 586
>gi|262374934|ref|ZP_06068168.1| type IV pilus biogenesis/stability protein PilW [Acinetobacter
lwoffii SH145]
gi|262309947|gb|EEY91076.1| type IV pilus biogenesis/stability protein PilW [Acinetobacter
lwoffii SH145]
Length = 266
Score = 40.5 bits (92), Expect = 0.26, Method: Composition-based stats.
Identities = 31/256 (12%), Positives = 73/256 (28%), Gaps = 13/256 (5%)
Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
L I LV + + T VR + AV +L+ + A
Sbjct: 3 NLTSKFALISTVCVSLVLVACQTPDLGQKDPEKATKVRT-----QLAVEYLRTGDLDAAK 57
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
+Q P A + + + S ++A + I+ P++ Y
Sbjct: 58 RALDQALESSPRDSQANMMMGVLLQQEGSKLNLEKADHYFKRAISADPKNAQARNNYGTY 117
Query: 138 GMSYAQMIRDVPYD--------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
+ + L+ M RI + +++ + +
Sbjct: 118 LYQLERYNDAIEQFQIAGATLGYDQRFRALENMGRIYLKLSDTANAEKSFKQALQANRDS 177
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
+E+ + ++ AA +Q + A+ + A + +
Sbjct: 178 YISMLELAEIFYLNQQFPAATQMYQQFVRGVGQKNQGARALWIGIRTARAGGDQLGMQVL 237
Query: 250 VSLIQERYPQGYWARY 265
V+ ++ +P+ +
Sbjct: 238 VNQLRALFPESQEYQR 253
>gi|255292045|dbj|BAH90526.1| TPR repeat protein [uncultured bacterium]
gi|255292513|dbj|BAH89628.1| TPR repeat protein [uncultured bacterium]
gi|255293031|dbj|BAH90126.1| TPR repeat protein [uncultured bacterium]
Length = 272
Score = 40.5 bits (92), Expect = 0.26, Method: Composition-based stats.
Identities = 33/274 (12%), Positives = 68/274 (24%), Gaps = 38/274 (13%)
Query: 24 LTIFFSIAVCFLVGWERQSSR------------------------DVYLDSVTDVRYQRE 59
+ + +A L G Q D R
Sbjct: 3 IHLPILVAALMLAGCASQPREPLLRDAAGGQLAQVDMAVCSQVAADPERKLSKKERLAEL 62
Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
++++ A + + + ++ A + S K QA
Sbjct: 63 RMALGAGYMRKGALDVA---LQELEKSLELNPRSAEAHATMALLMLSLDKPVQAGEHYAR 119
Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYD--------QRATKLMLQYMSRIVERYTN 171
+ P + Y + + + R + + R+ +
Sbjct: 120 ALQLAPSDPEIRNNYGVYLCNQGRAREADAQFRCAIANPLYRTPAMAYTNAAECALRHGD 179
Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231
+ AA + + + RG+ A + + A A+
Sbjct: 180 PSRAEVDLQTAAQLDPSYAAASLLLADLSMDRGDAGVARRHLNRYMRHAGQTP-AGLALG 238
Query: 232 RLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
VE AL +D A L++ R+P A+
Sbjct: 239 IRVET--ALGDLDRAASYRLLLKNRFPDSREAQE 270
>gi|126699669|ref|YP_001088566.1| putative lipoprotein [Clostridium difficile 630]
Length = 225
Score = 40.5 bits (92), Expect = 0.26, Method: Composition-based stats.
Identities = 15/97 (15%), Positives = 31/97 (31%), Gaps = 12/97 (12%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
L + + + SI FLVG ++ L + +L++ N+ KA E
Sbjct: 6 LMRGRVILLISILSIFLVGCSFNKKDEINLVE------------QGKTYLEKHNYKKAME 53
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
+ + AR + + + +
Sbjct: 54 SLSSALEEDSTNENARAMYMQAMRMSNMTEFEELKNY 90
>gi|328542546|ref|YP_004302655.1| Tol-pal system protein YbgF [polymorphum gilvum SL003B-26A1]
gi|326412292|gb|ADZ69355.1| Tol-pal system protein YbgF, putative [Polymorphum gilvum
SL003B-26A1]
Length = 323
Score = 40.5 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 20/108 (18%), Positives = 37/108 (34%), Gaps = 5/108 (4%)
Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL-----KRGEYVAAIP 211
R N Y + + + + V +Y+L +GEY AA
Sbjct: 197 DARTDYDRAYSFALNGDYAQAEQAFRIFIDTYPNDRLVSNAQYWLGESLLAQGEYRAAAD 256
Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
F +Y + A +++ +L + L D A S + ++P
Sbjct: 257 AFLKTYTDYPGDQKAPDSLLKLGLSLNGLGQTDAACATYSELLTKFPG 304
>gi|261332969|emb|CBH15964.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
DAL972]
Length = 555
Score = 40.5 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 25/229 (10%), Positives = 58/229 (25%), Gaps = 16/229 (6%)
Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK-- 95
++ + + VR VY + L + A F + +
Sbjct: 221 CFAKAEKAAQQCNSLLVRQPI-VYNAGLCALFRGEYDSAITCFLSVQELMKSSPLFWVRF 279
Query: 96 --------SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147
+ + Q S P + + + ++ S ++D
Sbjct: 280 AEASIGKLHAQKRVRSREEYERMQDCFSEQLHNGKLLPNYEFLTLPWAVITQSPLVDLKD 339
Query: 148 VPYDQRATKLM----LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
L ++ ++ + + A + + +
Sbjct: 340 NSVGTALEALASCAIQNALALLLPQNHTTISATDAFPHNAQLIHFALFYWCALEIVRKNY 399
Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMA-RLVEAYVALALMDEAREVVS 251
V L+ + + A+ +VEA V L D A +V+
Sbjct: 400 TVVVNVGSDLLLLHDRRPLSPNLHTALLSYMVEALVHLNEPDRALKVLR 448
>gi|296188856|ref|XP_002742533.1| PREDICTED: dnaJ homolog subfamily C member 3 [Callithrix jacchus]
Length = 504
Score = 40.5 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 23/258 (8%), Positives = 68/258 (26%), Gaps = 20/258 (7%)
Query: 34 FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93
L ++ +T + + +A+ + ++ A + ++ +
Sbjct: 131 VLKSNPSENEEKEAQSQLTKSDEMQRLRSQALDAFESGDYITAIAFLDKILEVCVWDAEL 190
Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153
R+ + K + E+ + Y + + +V +
Sbjct: 191 RELRAECFIKEGEPRKAISDLKAASKLKNDNTEAFYKISILYYQLGDHELSLSEVRECLK 250
Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK----------- 202
+ + + + + ++ A + GR A + E
Sbjct: 251 LDQDHKRCFAHYKQVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPSIVEYTVRSKE 310
Query: 203 -----RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA-REVVSLIQER 256
+ + ++ A+ EAY+ + DEA ++ + +
Sbjct: 311 RICHCFSKDEKPVEAIRVCSEVLQMEPDNVNALKDRAEAYLIEEMYDEAIQDYETAQEHN 370
Query: 257 YPQGYWA---RYVETLVK 271
+ L+K
Sbjct: 371 ENDQQIREGLEKAQRLLK 388
>gi|291239488|ref|XP_002739657.1| PREDICTED: OSMotic avoidance abnormal family member (osm-5)-like
[Saccoglossus kowalevskii]
Length = 826
Score = 40.5 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 18/196 (9%), Positives = 49/196 (25%), Gaps = 6/196 (3%)
Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL---LMSAFVQYSAGKYQQAA 114
+Y + K A + F + + L A ++
Sbjct: 514 EALYNLGLTNKKINLLEDALDCFLKLHAILRNSPQVLYHLATLYEMLEDSAQASEWYMQL 573
Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
Y Q + + +++++
Sbjct: 574 IGVVTTDPGILARLGEIYDNEGDKSQAFQYHYESYRYFPSNIEIIEWLGAYYIDSQFCEK 633
Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234
V + + ++ I + + G Y A+ ++ + + + E + LV
Sbjct: 634 AIHYFERAAVIQPTQSKWQLMIASCHRRSGNYQQALETYKHIHKKFPENI---ECLKFLV 690
Query: 235 EAYVALALMDEAREVV 250
+ L +A++
Sbjct: 691 RLCTDMGLTKDAQDYA 706
Score = 39.8 bits (90), Expect = 0.39, Method: Composition-based stats.
Identities = 25/221 (11%), Positives = 55/221 (24%), Gaps = 6/221 (2%)
Query: 43 SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102
+ + D + K + ++ KA EY+ + R A +L ++
Sbjct: 465 DKYAEMAIQADRYNPYAMVNKGNCLFAQGDYEKAREYYQEAGRTDSSCTEALYNLGLTNK 524
Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL---ML 159
+ P+ Y + AQ +L
Sbjct: 525 KINLLEDALDCFLKLHAILRNSPQVLYHLATLYEMLEDSAQASEWYMQLIGVVTTDPGIL 584
Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219
+ I + + + +G YY+ AI F+
Sbjct: 585 ARLGEIYDNEGDKSQAFQYHYESYRYFPSNIEIIEWLGAYYIDSQFCEKAIHYFERAAVI 644
Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
+ + + +A E I +++P+
Sbjct: 645 QPTQSKWQ---LMIASCHRRSGNYQQALETYKHIHKKFPEN 682
>gi|158522865|ref|YP_001530735.1| TPR repeat-containing protein [Desulfococcus oleovorans Hxd3]
gi|158511691|gb|ABW68658.1| Tetratricopeptide TPR_2 repeat protein [Desulfococcus oleovorans
Hxd3]
Length = 222
Score = 40.5 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 9/48 (18%), Positives = 19/48 (39%)
Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
+ H E A+ L Y + +++++ + I YP +A
Sbjct: 171 PVSAHKETALFNLARLYEQVGETEKSQKAFAQIVSEYPDSMYADIARE 218
>gi|34763508|ref|ZP_00144449.1| hypothetical protein [Fusobacterium nucleatum subsp. vincentii ATCC
49256]
gi|27886814|gb|EAA23946.1| hypothetical protein [Fusobacterium nucleatum subsp. vincentii ATCC
49256]
Length = 512
Score = 40.5 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 26/263 (9%), Positives = 71/263 (26%), Gaps = 33/263 (12%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K L IF +++ L + +++ + D E + + +++ K +
Sbjct: 1 MKKIGLVIFLALSFLLLTSCNKDENKNPKIKFSDDTYKLFEEFTE-----NKKDIIKKLK 55
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
N+ + + + K +A + I + +
Sbjct: 56 TLNKDEANKLYEQYVE-------DNENILYKIGEATEKFLDSIYYGSAEEQFTEKDWNDT 108
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
+D + ++ + + + Y+ +
Sbjct: 109 NKILNKYDLELWDIGEGMVTIRELPHLYYDVFKDYVTDDYKEYLKIWAKDHEELYQADAG 168
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY---VALAL------------- 242
+ E I ++ L Y ++ + A L +Y L +
Sbjct: 169 LVISFEELGERIITWENFLNKYPNSILKPKITALL-NSYREDYILGMENTPTIDGGYDNV 227
Query: 243 ----MDEAREVVSLIQERYPQGY 261
+EA++ ++YP
Sbjct: 228 PITIYEEAKKEYDRFMKKYPNSP 250
>gi|319952096|ref|YP_004163363.1| tetratricopeptide tpr_1 repeat-containing protein [Cellulophaga
algicola DSM 14237]
gi|319420756|gb|ADV47865.1| Tetratricopeptide TPR_1 repeat-containing protein [Cellulophaga
algicola DSM 14237]
Length = 1005
Score = 40.5 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 29/238 (12%), Positives = 62/238 (26%), Gaps = 15/238 (6%)
Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS--RDFPFAGVARKSLLMSA 101
+ ++ R Y KA F +A F +
Sbjct: 449 KKSLDNAEDPKFKARASYWKAEAEYNSNLFKEALSSFAEFQKNPHAKSTPDYIDYNYSLG 508
Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL---- 157
+ + +Y AA+ Y + + Y +G SY + P + +
Sbjct: 509 YTNFKLKEYVNAATNFAAYASGSTDVDKKHDAYLRLGDSYFASSKYWPAIEAYNQALEGA 568
Query: 158 ------MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE---VEIGRYYLKRGEYVA 208
+ + + K+ E+G Y++ +
Sbjct: 569 GSEKDYAAFQKALSYGFVDRAATKIEELNAFIGRYPKSTLKDDVLFELGNSYVRGNKEEE 628
Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
+ + +++ Y + +A+ R Y D+A + YP A
Sbjct: 629 GLKVYDKLISEYKGSSLVPQAIVRQGLVYYNSNRSDQALVKFKTVVRDYPDTQEAVQA 686
>gi|294056473|ref|YP_003550131.1| Tetratricopeptide TPR_2 repeat protein [Coraliomargarita
akajimensis DSM 45221]
gi|293615806|gb|ADE55961.1| Tetratricopeptide TPR_2 repeat protein [Coraliomargarita
akajimensis DSM 45221]
Length = 342
Score = 40.5 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 23/233 (9%), Positives = 60/233 (25%), Gaps = 52/233 (22%)
Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
G + + V + T +Y + ++++++ + KAY++ +P +
Sbjct: 70 GGADKQFKKVVKNYPTTESAAEALYMRGRVYMEKKRYVKAYKFLQSTVDTYPNYKDFNRV 129
Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
+ + + + I + +
Sbjct: 130 IGAQFECATALMEGARG------------------------------RIFGIIPGFKQYG 159
Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
++ ++ S Y ++I KR + AI +
Sbjct: 160 ESIKQFEGVISNAPYSDYSP--------------LALMDIALVAEKRNDDEVAIDALDRL 205
Query: 217 LANYSDAEHAEEAMARLVEAY--------VALALMDEAREVVSLIQERYPQGY 261
+ Y + A +A L + Y +A +P+
Sbjct: 206 INFYPQSMLAPDAYYTLAKTYGGLVQNAEYDQGSTRQAISYYEDYLVLFPESQ 258
Score = 37.1 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 17/81 (20%), Positives = 31/81 (38%), Gaps = 3/81 (3%)
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
A + + G G Y A +F+ V+ NY E A EA+ Y+ +A +
Sbjct: 53 ADRILNKGLSKFSAGSYGGADKQFKKVVKNYPTTESAAEALYMRGRVYMEKKRYVKAYKF 112
Query: 250 VSLIQERYPQGYWARYVETLV 270
+ + YP + ++
Sbjct: 113 LQSTVDTYPN---YKDFNRVI 130
>gi|119617791|gb|EAW97385.1| transmembrane and tetratricopeptide repeat containing 2, isoform
CRA_b [Homo sapiens]
Length = 830
Score = 40.5 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 16/226 (7%), Positives = 47/226 (20%), Gaps = 10/226 (4%)
Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
++ +Y L+ ++ ++ +A + + + P +
Sbjct: 581 CSEIPDENLKDPHAHKSSVTSCLYNLGKLYHEQGHYEEALSVYKEAIQKMPRQFAPQSLY 640
Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL------VGMSYAQMIRDVPYD 151
M K +A E + + Y ++
Sbjct: 641 NMMGEAYMRLSKLPEAEHWYMESLRSKTDHIPAHLTYGKLLALTGRKSEAEKLFLKAIEL 700
Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
+ + + + + AA
Sbjct: 701 DPTKGNCYMHYGQFLLEEARLIEAAEMAKKAAELDSTEFDVVFNAAHMLRQASLNEAAEK 760
Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR-EVVSLIQER 256
+ L + A+ L + +A + +Q +
Sbjct: 761 YYDLAARLRPNYPA---ALMNLGAILHLNGRLQKAEANYLRALQLK 803
>gi|228988227|ref|ZP_04148324.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
thuringiensis serovar tochigiensis BGSC 4Y1]
gi|228771524|gb|EEM19993.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
thuringiensis serovar tochigiensis BGSC 4Y1]
Length = 273
Score = 40.5 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 13/73 (17%), Positives = 24/73 (32%)
Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
+Q+ K LT S ++ L + + L E+ EKA L+++
Sbjct: 1 MFQMKKLLLTALISTSIFGLAACGGKDKDEKKLVVGASNVPHAEILEKAKPLLEKKGIEL 60
Query: 76 AYEYFNQCSRDFP 88
+ F
Sbjct: 61 EVKKFQDYVLPNK 73
>gi|196000432|ref|XP_002110084.1| hypothetical protein TRIADDRAFT_53679 [Trichoplax adhaerens]
gi|190588208|gb|EDV28250.1| hypothetical protein TRIADDRAFT_53679 [Trichoplax adhaerens]
Length = 1330
Score = 40.5 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 18/208 (8%), Positives = 50/208 (24%), Gaps = 14/208 (6%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL--GEE 119
+L + + +A + + + + ++ Q
Sbjct: 408 NLGNAYLDQGKYEEAISMYEKSLKIRLSVLDHNHPDIAVSYNNMGEAYRHQGKHEEAISM 467
Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
Y +V + + + Q + + + + + T
Sbjct: 468 YEQSLKIRLSVLGHNHPDVAMSYNNLGNAYRHQSKHEEAISMYEKSL-KITLPVLGHNHP 526
Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
N A + + R ++ N+ D + + E Y
Sbjct: 527 DVAGSYSNMGAVYSNQGKYEEAISMNKKSLKIRLSVLGHNHPD---VAASYNNMGEVYRH 583
Query: 240 LALMDEA--------REVVSLIQERYPQ 259
+EA + +S++ +P
Sbjct: 584 QGKHEEAISMYEKSLKITLSVLGHNHPD 611
>gi|329121953|ref|ZP_08250566.1| hypothetical protein HMPREF9083_1028 [Dialister micraerophilus
DSM 19965]
gi|327467399|gb|EGF12898.1| hypothetical protein HMPREF9083_1028 [Dialister micraerophilus
DSM 19965]
Length = 213
Score = 40.2 bits (91), Expect = 0.28, Method: Composition-based stats.
Identities = 11/76 (14%), Positives = 25/76 (32%), Gaps = 5/76 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQ-----SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNF 73
+ +F I V G ++ +++ + ++YEKA K+ +F
Sbjct: 9 MKNIIKYLFIFICVFAFTGCSDNVSQVKNNDISSTETIVLDKKSEDLYEKANNLYKQNDF 68
Query: 74 SKAYEYFNQCSRDFPF 89
A ++
Sbjct: 69 DAALTVADEAVSYNKN 84
>gi|325286671|ref|YP_004262461.1| hypothetical protein Celly_1766 [Cellulophaga lytica DSM 7489]
gi|324322125|gb|ADY29590.1| Tetratricopeptide TPR_1 repeat-containing protein [Cellulophaga
lytica DSM 7489]
Length = 595
Score = 40.2 bits (91), Expect = 0.28, Method: Composition-based stats.
Identities = 36/267 (13%), Positives = 87/267 (32%), Gaps = 14/267 (5%)
Query: 10 CIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLK 69
+ E + Y+ + L + ++ + F ++ + + + Q YE+A + +
Sbjct: 324 VLLETYGYKPHSIMLQLRYANFLAF----KKDETEEATFVLKKTLELQLNRYEEAKIKMA 379
Query: 70 -------EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
+ F++A Y+ Q ++ +A+ + A + G + A + + +
Sbjct: 380 LADILVYNKRFNEALIYYTQIQKNLKNDVLAQNARFKVAKASFYKGDFDWALAQLKVLRS 439
Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
+ D + + +S + + + + T +
Sbjct: 440 STSQLIANDAMQLSLLISDNSLQDSTQTALKKYATA--DLLAYQNKTTEAIAALDDILEN 497
Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV-ALA 241
G ++ +K+ EY A + ++ Y A++A L E Y L
Sbjct: 498 HKGEKIEDEALLKQAELLIKQQEYEKAELNYLKIIEFYKSGILADDAHYALGELYRTILY 557
Query: 242 LMDEAREVVSLIQERYPQGYWARYVET 268
+EA+ I Y Y+
Sbjct: 558 KPEEAKYHYEKIIYGYQDSYFFPLARK 584
>gi|115389426|ref|XP_001212218.1| hypothetical protein ATEG_03040 [Aspergillus terreus NIH2624]
gi|114194614|gb|EAU36314.1| hypothetical protein ATEG_03040 [Aspergillus terreus NIH2624]
Length = 712
Score = 40.2 bits (91), Expect = 0.28, Method: Composition-based stats.
Identities = 25/194 (12%), Positives = 51/194 (26%), Gaps = 17/194 (8%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFA-GVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
E+ K +++ KA E + + P + K L A + +Y A + E
Sbjct: 439 EEGNAAFKAKDYRKAIELYGEALAVDPNNKDMNSKILQNRAQAYINLKEYDNAVNDCTEA 498
Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
+ P +M + ++ + E ++
Sbjct: 499 LRLDPSYTKA-----------QKMRAKAHGGAGNWEEAVRDYKAVAEANPTESNIQEDIR 547
Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY-SDAEHAEEA----MARLVE 235
+ K+ K ++ + Y D EA + E
Sbjct: 548 KAEFELKKAQRKDYYKILGVDKDASEQDIKKAYRKMAIKYHPDKNQDGEAGDEKFKEIGE 607
Query: 236 AYVALALMDEAREV 249
AY L+ +
Sbjct: 608 AYETLSDPQKRAAY 621
>gi|57525441|ref|NP_001006250.1| peptidyl-prolyl cis-trans isomerase FKBP4 [Gallus gallus]
gi|53133360|emb|CAG32009.1| hypothetical protein RCJMB04_15n8 [Gallus gallus]
Length = 442
Score = 40.2 bits (91), Expect = 0.28, Method: Composition-based stats.
Identities = 21/191 (10%), Positives = 48/191 (25%), Gaps = 5/191 (2%)
Query: 74 SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
KA + + + + + + + ES ++
Sbjct: 198 EKAIQKMEKSEESIFYLKPNYGFGSTGKEKFQIPPDAELQYEVKLKSFEKAKESWEMNTE 257
Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
L + + + K +IV + + A
Sbjct: 258 EKLEQSCMVKERGTQYFKEGKYKRAALQYKKIVLWLEHESGLSDEEDTKAKSLRLAAHLN 317
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+ + LK + E+ + R EA++A+ + AR +
Sbjct: 318 LAMCHLKLKEYS-----QALENCNKALELDSSNEKGLFRRGEAHLAVNDFELARGDFQKV 372
Query: 254 QERYPQGYWAR 264
+ YP A+
Sbjct: 373 IQLYPSNKAAK 383
>gi|116621227|ref|YP_823383.1| TPR repeat-containing protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116224389|gb|ABJ83098.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter
usitatus Ellin6076]
Length = 365
Score = 40.2 bits (91), Expect = 0.28, Method: Composition-based stats.
Identities = 24/206 (11%), Positives = 56/206 (27%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
S Q + A +L + +S+A F P + L + +
Sbjct: 141 SEAQPDNQELRFTLAQSYLWSEQYSEALREFQFLLSKDPDSAPVHILLGQAFDASHRTEA 200
Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
+ T P + Y Y R+ + + Q ++ + +
Sbjct: 201 AIAEFEAAVKASTVPPNAHFGLGYLYWKQRRYEAAGREFEMELASQPQHSQSLTYLGDAE 260
Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
++ A ++ A + + + + +A
Sbjct: 261 MHTDKDGPAETHLRRALALDAGIRLAHLDLGILLAAKNGSDEAARHFREAIRLDPSRPDA 320
Query: 230 MARLVEAYVALALMDEAREVVSLIQE 255
RL + +L EA++ +Q+
Sbjct: 321 HYRLGRLWTSLGREHEAQDEFDKVQK 346
>gi|117618152|ref|YP_858092.1| TPR domain-containing protein [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|117559559|gb|ABK36507.1| TPR domain protein [Aeromonas hydrophila subsp. hydrophila ATCC
7966]
Length = 270
Score = 40.2 bits (91), Expect = 0.28, Method: Composition-based stats.
Identities = 24/189 (12%), Positives = 58/189 (30%), Gaps = 14/189 (7%)
Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
Q + +++ Q AA+ + +Y L
Sbjct: 93 QLEQQTYQMEQSQERQRQLYQELDKVANSQPAATPAAPAAAAASATPAANYSTNLNENQA 152
Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
++ ++ + +++Y +S YV A +++ G+
Sbjct: 153 YDAAVNMVLKEKNYDKAIPAFEGFIKQYPSSSYVPNAHYWL--------------GQLLF 198
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
+G+ A +F V +S + +A+ +L EA+ + + YP
Sbjct: 199 NKGDRTGAAAQFTTVATKFSKSPKRADALLKLGMLAQLDGKKAEAKNFYEQVIKGYPNTS 258
Query: 262 WARYVETLV 270
A+ + +
Sbjct: 259 PAQLAKQSL 267
Score = 38.2 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 13/87 (14%), Positives = 26/87 (29%), Gaps = 2/87 (2%)
Query: 185 GRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244
LK Y AIP F+ + Y + + A L +
Sbjct: 145 TNLNENQAYDAAVNMVLKEKNYDKAIPAFEGFIKQYPSSSYVPNAHYWLGQLLFNKGDRT 204
Query: 245 EAREVVSLIQERYPQGYWARYVETLVK 271
A + + ++ + + + L+K
Sbjct: 205 GAAAQFTTVATKFSKSP--KRADALLK 229
>gi|78222447|ref|YP_384194.1| intermediate filament protein [Geobacter metallireducens GS-15]
gi|78193702|gb|ABB31469.1| Intermediate filament protein [Geobacter metallireducens GS-15]
Length = 573
Score = 40.2 bits (91), Expect = 0.28, Method: Composition-based stats.
Identities = 27/247 (10%), Positives = 63/247 (25%), Gaps = 14/247 (5%)
Query: 20 YKFALTIFFSIAVCFLVGWERQ------SSRDVYLDSVTDVRYQREVYEKAVLFLKE--Q 71
K + + +A+ FL G + + ++ R +Y ++ L+E
Sbjct: 1 MKKRIVVALFLALSFLPGCATNGAGKPLPANEHSFQPTVNIAGSRALYIYSLSRLRELDG 60
Query: 72 NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY---ITQYPESK 128
+F A N P + + +A
Sbjct: 61 DFEGALTLLNGAIEADPNSAFLHTAAAEIYLKSGKLDDALRACENAIRVDPGFRPARIIA 120
Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
+ + +++ R + + +
Sbjct: 121 GTILANLKRDKEAIVHLSKAIELDPTKEDAYLHLAISYVRTFDYEQAVNTLKSLIKINPE 180
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
+ +G+ Y + A ++ + D E+A+ L + L L D+A
Sbjct: 181 SSLGYYYLGKTYDQMKLQKEAANYYKKAIEIKPDF---EQAIIDLGISQEGLGLYDDAIA 237
Query: 249 VVSLIQE 255
+ E
Sbjct: 238 TYKRLLE 244
Score = 39.8 bits (90), Expect = 0.41, Method: Composition-based stats.
Identities = 24/197 (12%), Positives = 53/197 (26%), Gaps = 1/197 (0%)
Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
+++++ + + +A F Q P A R + + + K + S
Sbjct: 291 GLIYMELERYDEAIAEFEQILAREPKAHQIRFYIASAYEEKEEFDKAIEEFSKIPPGTAN 350
Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
Y E+ Y + I+ + A L + Y + +
Sbjct: 351 YVEALGHIAFMYRDQEKPEKGIQILTDAITANPDKLDLYLYLAGLYESMDKFSEGLAVLK 410
Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243
+ A R + + + +A+ L Y + +
Sbjct: 411 GVEGKFAEDPRLHFRMGTILDKMGNKEESIARMKRVIAITPDDAQALNYLGYTYAEMGIK 470
Query: 244 -DEAREVVSLIQERYPQ 259
DEA + + P
Sbjct: 471 LDEALQYLKKAVALRPN 487
>gi|119356693|ref|YP_911337.1| membrane lipoprotein lipid attachment site [Chlorobium
phaeobacteroides DSM 266]
gi|119354042|gb|ABL64913.1| membrane lipoprotein lipid attachment site [Chlorobium
phaeobacteroides DSM 266]
Length = 256
Score = 40.2 bits (91), Expect = 0.28, Method: Composition-based stats.
Identities = 32/257 (12%), Positives = 75/257 (29%), Gaps = 7/257 (2%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVY--EKAVLFLKEQNFSKAY 77
K ++ + + L G +S + D + ++ + E + AV + Q
Sbjct: 1 MKKSIRLLLFLPTIVLAGCASKSDLVLVADDINKLKTESETIKSQSAVTYADIQQVRDEI 60
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
Q + +K + K + S + +
Sbjct: 61 AR-QQGRVEEIAHNNEQKFGRLGLEDSLLVHKVDELDSRLLRIEQKLGLVAERPGIEKAT 119
Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA----AKE 193
+ ++ V I + +N+ F + + + +
Sbjct: 120 LSAKESQVQPVSPLASVMTDKALLDDGIKKLASNNASGARGSFSLLMKNYPKSELVDDAQ 179
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+ YL Y A+ +Q+V+A Y+ + A+ + A+ L A+ +
Sbjct: 180 FYVAESYLSEKWYEKAVLEYQVVIAKYTKSNKRAVALYKQGLAFELLGDAVNAKARFRDV 239
Query: 254 QERYPQGYWARYVETLV 270
YP A+ + +
Sbjct: 240 INIYPASAEAKLAKQKL 256
>gi|294495545|ref|YP_003542038.1| hypothetical protein Mmah_0870 [Methanohalophilus mahii DSM 5219]
gi|292666544|gb|ADE36393.1| Tetratricopeptide TPR_2 repeat protein [Methanohalophilus mahii DSM
5219]
Length = 288
Score = 40.2 bits (91), Expect = 0.28, Method: Composition-based stats.
Identities = 24/206 (11%), Positives = 55/206 (26%), Gaps = 12/206 (5%)
Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
+Y + + K +A E + D P K ++ S +
Sbjct: 83 LYSRCFVLYKMGKHEEALEVIDSFLEDDPQDADKWFGHGFVMQSIGQHQKAVESFSKCLD 142
Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
+ ++ + Q + + + V+ + Y
Sbjct: 143 LNPAFSDAWYCKATLLYHNDEFTQALECYEMAAQHSD---------VKDFAFPRYSFLNI 193
Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
+ A G K + AI F+ L ++ + + Y+
Sbjct: 194 DPKPKLKKDAAGILYGKGNTLFKLERFEEAIEAFKGALDIEPESPKIWQGL---ANTYLK 250
Query: 240 LALMDEAREVVSLIQERYPQGYWARY 265
+ D A + + + E P+ A+
Sbjct: 251 IGNDDRANKAFAKLLELDPENSQAKE 276
>gi|229141702|ref|ZP_04270232.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
cereus BDRD-ST26]
gi|229158581|ref|ZP_04286640.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
cereus ATCC 4342]
gi|228624895|gb|EEK81663.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
cereus ATCC 4342]
gi|228641770|gb|EEK98071.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
cereus BDRD-ST26]
Length = 273
Score = 40.2 bits (91), Expect = 0.28, Method: Composition-based stats.
Identities = 13/73 (17%), Positives = 24/73 (32%)
Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
+Q+ K LT S ++ L + + L E+ EKA L+++
Sbjct: 1 MFQMKKLLLTALISTSIFGLAACGGKDKDEKKLVVGASNVPHAEILEKAKPLLEKKGIEL 60
Query: 76 AYEYFNQCSRDFP 88
+ F
Sbjct: 61 EVKKFQDYVLPNK 73
>gi|193216173|ref|YP_001997372.1| tetratricopeptide domain-containing protein [Chloroherpeton
thalassium ATCC 35110]
gi|193089650|gb|ACF14925.1| Tetratricopeptide TPR_2 repeat protein [Chloroherpeton thalassium
ATCC 35110]
Length = 294
Score = 40.2 bits (91), Expect = 0.28, Method: Composition-based stats.
Identities = 17/234 (7%), Positives = 56/234 (23%), Gaps = 2/234 (0%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + +F + FL+ + S + + +++Y + + + + + A
Sbjct: 1 MMMKIVALFSIRMILFLLCLVQVSECVAQSAEDAESQAYQKIY-EGNILMDKGLYEPAIA 59
Query: 79 YFNQCSRDFPFAGVARKSLLM-SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
+ + + P + A + + + + + +Y
Sbjct: 60 AYQEATTLVPNDPKPYYYMSFLYAELGRLSEAKIFVEKALQIWPLYPEAHALLGAIYLQN 119
Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
+ + + + + A ++ +A
Sbjct: 120 QAFERAFSELNFAITQKYEQPSALNNLGGYYLLHKNNMDSAIYFFCETVRLDSAFSDAYI 179
Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
A + + L AY +EA ++
Sbjct: 180 NLSNAYLHKKAVADAMIAAQKALQLSPENPDVYFSLANAYFLDGKYEEAEKLYR 233
>gi|46447180|ref|YP_008545.1| hypothetical protein pc1546 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400821|emb|CAF24270.1| unknown protein [Candidatus Protochlamydia amoebophila UWE25]
Length = 896
Score = 40.2 bits (91), Expect = 0.28, Method: Composition-based stats.
Identities = 12/66 (18%), Positives = 22/66 (33%)
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
K ++ AA F Y + E + + + L +E + + YPQ
Sbjct: 504 KENDWKAAYNHFSDFFKYYPHSIEIGEILFWMADCCSHLNNEQVRQEHLRTLYLNYPQSP 563
Query: 262 WARYVE 267
+A
Sbjct: 564 FAAPAY 569
>gi|147905472|ref|NP_001087168.1| transmembrane and TPR repeat-containing protein 2 [Xenopus laevis]
gi|82235676|sp|Q6DCD5|TMTC2_XENLA RecName: Full=Transmembrane and TPR repeat-containing protein 2
gi|50416348|gb|AAH78113.1| MGC83626 protein [Xenopus laevis]
Length = 836
Score = 40.2 bits (91), Expect = 0.29, Method: Composition-based stats.
Identities = 16/226 (7%), Positives = 46/226 (20%), Gaps = 10/226 (4%)
Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
++ + +Y L+ ++ + A + + + P +
Sbjct: 587 CSEIPDENLKDPNAHKSSVTSCLYNLGKLYHEQGQYEDALIVYKEAIQKMPRQFSPQSLY 646
Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL------VGMSYAQMIRDVPYD 151
M +A E + P+ Y +
Sbjct: 647 NMMGEAYMRLNVVSEAEHWYTESLKSKPDHIPAHLTYGKLLTLTGRKNEAERYFLKAIQL 706
Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
+ + + + + A
Sbjct: 707 DPNKGNCYMHYGQFLLEEGRILEAAEMAKKAAELDSSEFDVVFNAAHMLRQASLNEEAEK 766
Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR-EVVSLIQER 256
++L + A+ L ++EA + +Q +
Sbjct: 767 FYKLAAGLRQNYPA---ALMNLGAILHLNGKLEEAEYNYLRALQLK 809
>gi|71748084|ref|XP_823097.1| hypothetical protein [Trypanosoma brucei TREU927]
gi|70832765|gb|EAN78269.1| hypothetical protein, conserved [Trypanosoma brucei]
Length = 555
Score = 40.2 bits (91), Expect = 0.29, Method: Composition-based stats.
Identities = 25/229 (10%), Positives = 58/229 (25%), Gaps = 16/229 (6%)
Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK-- 95
++ + + VR VY + L + A F + +
Sbjct: 221 CFAKAEKAAQQCNSLLVRQPI-VYNAGLCALFRGEYDSAITCFLSVQELMKSSPLFWVRF 279
Query: 96 --------SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147
+ + Q S P + + + ++ S ++D
Sbjct: 280 AEASIGKLHAQKRVRSREEYERMQDCFSEQLHNGKLLPNYEFLTLPWAVITQSPLVDLKD 339
Query: 148 VPYDQRATKLM----LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
L ++ ++ + + A + + +
Sbjct: 340 NSVGTALEALASCAIQNALALLLPQNHTTISATDAFPHNAQLIHFALFYWCALEIVRKNY 399
Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMA-RLVEAYVALALMDEAREVVS 251
V L+ + + A+ +VEA V L D A +V+
Sbjct: 400 TVVVNVGSDLLLLHDRRPLSPNLHTALLSYMVEALVHLNEPDRALKVLR 448
>gi|296136888|ref|YP_003644130.1| tol-pal system protein YbgF [Thiomonas intermedia K12]
gi|295797010|gb|ADG31800.1| tol-pal system protein YbgF [Thiomonas intermedia K12]
Length = 271
Score = 40.2 bits (91), Expect = 0.29, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 34/89 (38%)
Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
A + + + +Y AI FQ ++ + + EAM L + +
Sbjct: 179 QYPSSPYDADAQYWLANAQYAQKQYKDAITTFQGLIQSSPNNPRLPEAMLGLANCQIEVR 238
Query: 242 LMDEAREVVSLIQERYPQGYWARYVETLV 270
+ AR+ ++ + + YPQ A+ +
Sbjct: 239 QIVAARKTLNELVKTYPQSEAAQAGRDRL 267
Score = 38.6 bits (87), Expect = 0.82, Method: Composition-based stats.
Identities = 11/73 (15%), Positives = 23/73 (31%)
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
E + G++ + + + LA Y + + +A L A A +A +
Sbjct: 154 FEQALATFRNGDFAGSATQLKAFLAQYPSSPYDADAQYWLANAQYAQKQYKDAITTFQGL 213
Query: 254 QERYPQGYWARYV 266
+ P
Sbjct: 214 IQSSPNNPRLPEA 226
>gi|149192089|ref|ZP_01870313.1| hypothetical protein VSAK1_00450 [Vibrio shilonii AK1]
gi|148834075|gb|EDL51088.1| hypothetical protein VSAK1_00450 [Vibrio shilonii AK1]
Length = 262
Score = 40.2 bits (91), Expect = 0.29, Method: Composition-based stats.
Identities = 9/93 (9%), Positives = 28/93 (30%)
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
+F + + + + + ++ +A+ +L +
Sbjct: 170 QFQKDYPNSTFMPNTHYWLGQLYFAKRQDSEAEKSFKAVLGFKESNKRADALVKLGDLAK 229
Query: 239 ALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
EA++ + YP A+ ++ +K
Sbjct: 230 RGNKAAEAKKYYEQVIAEYPGSSSAKVAQSNLK 262
>gi|119477237|ref|ZP_01617473.1| hypothetical protein GP2143_02904 [marine gamma proteobacterium
HTCC2143]
gi|119449600|gb|EAW30838.1| hypothetical protein GP2143_02904 [marine gamma proteobacterium
HTCC2143]
Length = 267
Score = 40.2 bits (91), Expect = 0.29, Method: Composition-based stats.
Identities = 14/127 (11%), Positives = 36/127 (28%), Gaps = 12/127 (9%)
Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
+ A R L+ + V Y Y + ++
Sbjct: 133 PVIMVQPEEKTAYDRAYALVTSRRFDDALEAFKQFVIDYPEGKYAPNSFYW--------- 183
Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
+ + + +A F ++ Y +AM +L + Y ++++++
Sbjct: 184 ---MGELYQVITPQDLESARQVFTQLIDQYPGHAKIPDAMYKLGKVYFLKGNRSKSQDLL 240
Query: 251 SLIQERY 257
+ Y
Sbjct: 241 DQVIADY 247
>gi|116748479|ref|YP_845166.1| extracellular ligand-binding receptor [Syntrophobacter fumaroxidans
MPOB]
gi|116697543|gb|ABK16731.1| Extracellular ligand-binding receptor [Syntrophobacter fumaroxidans
MPOB]
Length = 643
Score = 40.2 bits (91), Expect = 0.29, Method: Composition-based stats.
Identities = 16/71 (22%), Positives = 25/71 (35%)
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
A K V+ K G AI ++ V+ Y A + + Y+A D A +
Sbjct: 46 DAEKMVQQAEQARKSGNIPKAISLWEKVIQKYPGHAVAARGFSVVGNLYLAQGQPDRALQ 105
Query: 249 VVSLIQERYPQ 259
+ YP
Sbjct: 106 YFDYLLYTYPN 116
Score = 39.8 bits (90), Expect = 0.36, Method: Composition-based stats.
Identities = 18/114 (15%), Positives = 41/114 (35%), Gaps = 5/114 (4%)
Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDS-----VTDVRYQREVYEKAVLFLKEQN 72
++ +++ + + V FL G S T ++ ++A K N
Sbjct: 3 RISRYSRILLLVVTVAFLAGCPGSQQPAEQAPSRPSLTGTTPPDAEKMVQQAEQARKSGN 62
Query: 73 FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126
KA + + + +P VA + + + + G+ +A + + YP
Sbjct: 63 IPKAISLWEKVIQKYPGHAVAARGFSVVGNLYLAQGQPDRALQYFDYLLYTYPN 116
>gi|326790564|ref|YP_004308385.1| Tetratricopeptide repeat-containing protein [Clostridium
lentocellum DSM 5427]
gi|326541328|gb|ADZ83187.1| Tetratricopeptide repeat-containing protein [Clostridium
lentocellum DSM 5427]
Length = 457
Score = 40.2 bits (91), Expect = 0.29, Method: Composition-based stats.
Identities = 19/146 (13%), Positives = 46/146 (31%)
Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
+++ + + ++R + + I +
Sbjct: 312 QTQEYEKQLGAYVQKDKLVTAKTHIEERMYVEAAEALYNIAPSLLDEESKMTYEALKEAC 371
Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
+ AA+ G L +Y A + + L ++ A ++ L E L + E
Sbjct: 372 YEKAAAELYNEGYQLLSGEDYAGAKGKLEAALIYDGTSQTARRSLYYLGETEEKLGNITE 431
Query: 246 AREVVSLIQERYPQGYWARYVETLVK 271
A+ + + +P Y AR + ++
Sbjct: 432 AQNYYNKVITEFPDTYEARRAKERIQ 457
>gi|15606205|ref|NP_213582.1| hypothetical protein aq_854 [Aquifex aeolicus VF5]
gi|2983399|gb|AAC06984.1| hypothetical protein aq_854 [Aquifex aeolicus VF5]
Length = 545
Score = 40.2 bits (91), Expect = 0.29, Method: Composition-based stats.
Identities = 30/222 (13%), Positives = 74/222 (33%), Gaps = 7/222 (3%)
Query: 53 DVRYQREVYEKAVL-FLKEQNFSKA---YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
+ E+Y+ + L+ + + KA + F + D P A + ++ A
Sbjct: 44 EKIPSPELYKDTIKVLLRNKEYEKAKELAKEFLETYPDEPQAYIYLYTIYKFLKEDKKAF 103
Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
+ + A + +Y+ +++ + L + RI
Sbjct: 104 EVIKEAYKSFPFNENVVLFLANEYINKGKLREAEKVLLEYMETDPDNPLPYYLLGRIYLA 163
Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
+ + A + +G YL+ ++ A ++ VL Y ++
Sbjct: 164 KGDIQKGMEYFLKALEKKKYYAPAVLSLGNLYLQEKKFKEAEELYKSVLEKYPNSPKI-- 221
Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
+ +L + Y A ++EA ++ + P+ + L+
Sbjct: 222 -LEKLAKLYTASGRIEEAIKIYEKLINLKPRNVNYKTEYALL 262
>gi|291279941|ref|YP_003496776.1| hypothetical protein DEFDS_1561 [Deferribacter desulfuricans SSM1]
gi|290754643|dbj|BAI81020.1| hypothetical protein [Deferribacter desulfuricans SSM1]
Length = 249
Score = 40.2 bits (91), Expect = 0.29, Method: Composition-based stats.
Identities = 28/251 (11%), Positives = 68/251 (27%), Gaps = 11/251 (4%)
Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
+ I V ++G ++ + Y+ + +L +N +A F +
Sbjct: 2 KKIVSLIIFVSLILGCAQRVDKSKI---------AESHYKLGLAYLSSENDFRALGEFEE 52
Query: 83 CSRDFPFAGVARKSL--LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
+ P ++ + +L + + +
Sbjct: 53 ALKYNPKDDRIYYAISAFYLKKNMIGKAEQYIIKALSISPNNSEYLNTYASILAAKGDLE 112
Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
A + + + I Y N + A+ Y Y
Sbjct: 113 NAILNWKKILNDPTYPNIPLVYYNIGLAYYNMNDYEEAKKYFKSSIRANRFFVNSYLMLY 172
Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
+ + +++ + + M +L E Y ++A V I ++P+
Sbjct: 173 EIYNKEMNMAEAEKILKKAVDNNPASRVLMLKLGEHYYNEKKYNDAASVFEDIIIKFPKS 232
Query: 261 YWARYVETLVK 271
A+ T +K
Sbjct: 233 EEAKKAATYLK 243
>gi|210135433|ref|YP_002301872.1| paralysed flagella protein [Helicobacter pylori P12]
gi|210133401|gb|ACJ08392.1| paralysed flagella protein [Helicobacter pylori P12]
Length = 801
Score = 40.2 bits (91), Expect = 0.29, Method: Composition-based stats.
Identities = 9/53 (16%), Positives = 17/53 (32%)
Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
NY + EA+ + +A +A I Y +A + +
Sbjct: 260 KNYPTDPNIPEALYYVAKALDENNNYKQAMRYYKRILLEYKNSRYAPLAQMRL 312
Score = 37.9 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 34/278 (12%), Positives = 77/278 (27%), Gaps = 20/278 (7%)
Query: 12 FEAWAYQLYKFALTIFFSIAVCFLV---GWERQSSRDVYLDSVTDVRYQREVYEKAVLFL 68
F+ + ++K L + IA+ L + TD +Y A
Sbjct: 221 FKNYPQTMFKKDLYLLEIIALGQLGIKKSLLIDIGTKWIKNYPTDPNIPEALYYVAKALD 280
Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
+ N+ +A Y+ + ++ + A + + A A L +E + + +
Sbjct: 281 ENNNYKQAMRYYKRILLEYKNSRYAPLAQMRLAIEAAEGSDLSNANMLFKEAFSNAKDKE 340
Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI----------------VERYTNS 172
+ + + K+ I + ++
Sbjct: 341 SASEIALNWAEAEINYQNFNNAKYLIDKVAQSNPDYISTHSESALDLLKLLKKNQMNESA 400
Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232
+ ++G Y + ++ A L +Y++ + A AR
Sbjct: 401 IEIAHLLLNQDDDLKAKEQALYDLGALYARIKDFKNAHLYNLQYLQDYAELDKASVVRAR 460
Query: 233 LVEAYVAL-ALMDEAREVVSLIQERYPQGYWARYVETL 269
+A ++ E I +P A L
Sbjct: 461 DEKALFSMEGNTQEKIAHYDKIIHNFPNSNEALKALEL 498
>gi|78222589|ref|YP_384336.1| lytic transglycosylase, catalytic [Geobacter metallireducens GS-15]
gi|78193844|gb|ABB31611.1| Lytic transglycosylase, catalytic [Geobacter metallireducens GS-15]
Length = 719
Score = 40.2 bits (91), Expect = 0.29, Method: Composition-based stats.
Identities = 24/228 (10%), Positives = 55/228 (24%), Gaps = 12/228 (5%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
E++ +A F +A + F+ A + S Y A +
Sbjct: 219 PAAPYTPDELFRRASTLYSLGRFQQAVKTFDAIPLANQSADFIARVTFKSGQALYKARQR 278
Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY--------- 161
+ A + + + + + + + + K+
Sbjct: 279 KDAERTFARLLEKELKPSLAEETRFWHAKALEGIGKSDDAVNAYLKIAEASPRGELANEA 338
Query: 162 -MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220
+ R Y + + K + + Y R
Sbjct: 339 LLEAAFIRKFQGRYQEELPLLDRLLVAATDVKLRQRATWEAAWARYGTKDFRGAADAFKA 398
Query: 221 SDAE--HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
+ E A+ A + A ++ +QE P ++ R
Sbjct: 399 LQTIPEYRERALYWHGRALEGAGDKEGAAASLARVQEESPLSFYGRRA 446
Score = 35.9 bits (80), Expect = 6.0, Method: Composition-based stats.
Identities = 28/205 (13%), Positives = 58/205 (28%), Gaps = 3/205 (1%)
Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE-YI 121
+A + + +A + + +P + ++ +A + G +A ++
Sbjct: 136 QADILFARGDLKEAQAVYIRFVESYPSGRDSLTAIYQAARCREGLGDKAKAVQELRNLWL 195
Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
D L + + S + R+ + A
Sbjct: 196 AYPASPVAEDAEEALRQLERQGFPAAPYTPDELFRRASTLYS--LGRFQQAVKTFDAIPL 253
Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
+ +A + G+ K + A F +L AEE +A +
Sbjct: 254 ANQSADFIARVTFKSGQALYKARQRKDAERTFARLLEKELKPSLAEETRFWHAKALEGIG 313
Query: 242 LMDEAREVVSLIQERYPQGYWARYV 266
D+A I E P+G A
Sbjct: 314 KSDDAVNAYLKIAEASPRGELANEA 338
Score = 35.2 bits (78), Expect = 9.0, Method: Composition-based stats.
Identities = 9/64 (14%), Positives = 21/64 (32%)
Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
A + + +Y + A+ + L +A + + + YP A E
Sbjct: 148 EAQAVYIRFVESYPSGRDSLTAIYQAARCREGLGDKAKAVQELRNLWLAYPASPVAEDAE 207
Query: 268 TLVK 271
++
Sbjct: 208 EALR 211
>gi|332829535|gb|EGK02184.1| hypothetical protein HMPREF9455_01818 [Dysgonomonas gadei ATCC
BAA-286]
Length = 283
Score = 40.2 bits (91), Expect = 0.30, Method: Composition-based stats.
Identities = 36/237 (15%), Positives = 76/237 (32%), Gaps = 15/237 (6%)
Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106
+ + R Y A + E+ + + ++ + + ++ L + A +
Sbjct: 20 EYNKILKSRDAELKYTYAKKYFDEKKYGRTTTLLDEILSTYTGSSKEQEILFLMAQAYFY 79
Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
Y A Y ++P+ + + D DQ +T +Q +
Sbjct: 80 DKDYTTATQYYTRYYNKFPKGDYTELARFNAAYGLYLDSPDARLDQTSTIRGIQEFQNFL 139
Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEV-----EIGRYYLKRGEYVAAIPRFQLVLANYS 221
E + S A+ + + +L+ KE Y + I + L NY
Sbjct: 140 EYFPQSEKAPEAQDLMFKLQEKLSYKEFLAARLYFNLGLYMGNNYESCIVTSREALKNYP 199
Query: 222 DAEHAEEAMARLVEAYVALALMDEARE----VVSLI------QERYPQGYWARYVET 268
+E +EE +V + LA + L+ + +P G + + E
Sbjct: 200 FSEFSEEFQILIVRSRYELAYYSIEEKKPTRYRELMDEHFNYKNMFPSGKYLKESER 256
>gi|262370232|ref|ZP_06063558.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
gi|262314574|gb|EEY95615.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
Length = 281
Score = 40.2 bits (91), Expect = 0.30, Method: Composition-based stats.
Identities = 18/114 (15%), Positives = 42/114 (36%), Gaps = 13/114 (11%)
Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
K + M ++ NS Y+ A F++ ++ Y A + +
Sbjct: 180 KKAIAPMQNFIKNNPNSVYISNAYFWLAEFNL------------AIEPTNYAEAKKNYGI 227
Query: 216 VLANYSDAEHAEEAMARLVEAYVALALM-DEAREVVSLIQERYPQGYWARYVET 268
V Y ++ A A+ +L + +A + + + ++YP+ A + +
Sbjct: 228 VANQYPNSSRAPRAVYQLYNIAKEVDKNTTQANQYKAKLLKQYPKSEEATFFKK 281
>gi|228968103|ref|ZP_04129108.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
thuringiensis serovar sotto str. T04001]
gi|228791594|gb|EEM39191.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
thuringiensis serovar sotto str. T04001]
Length = 273
Score = 40.2 bits (91), Expect = 0.30, Method: Composition-based stats.
Identities = 13/73 (17%), Positives = 24/73 (32%)
Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
+Q+ K LT S ++ L + + L E+ EKA L+++
Sbjct: 1 MFQMKKLLLTALISTSIFGLAACGGKDKDEKKLVVGASNVPHAEILEKAKPLLEKKGIEL 60
Query: 76 AYEYFNQCSRDFP 88
+ F
Sbjct: 61 EVKKFQDYVLPNK 73
>gi|257095754|ref|YP_003169395.1| tol-pal system protein YbgF [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
gi|257048278|gb|ACV37466.1| tol-pal system protein YbgF [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
Length = 264
Score = 40.2 bits (91), Expect = 0.30, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 29/79 (36%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+G + + AI ++V+A + A +A+ + LA A+ +
Sbjct: 185 YYWLGNAHYALRDCKKAIDAHRVVVAKWPANPKAPDALLNVATCQQELADAKGAKGTLEA 244
Query: 253 IQERYPQGYWARYVETLVK 271
+ +YP A +K
Sbjct: 245 LVAKYPDSTAATTARQRLK 263
>gi|222086971|ref|YP_002545505.1| tol-pal system protein YbgF [Agrobacterium radiobacter K84]
gi|221724419|gb|ACM27575.1| tol-pal system protein YbgF [Agrobacterium radiobacter K84]
Length = 356
Score = 40.2 bits (91), Expect = 0.30, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 33/79 (41%), Gaps = 2/79 (2%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
E + ++ G+Y A F+ + +Y + + +A L EA + ++A +
Sbjct: 235 EYKAAYGHVLSGDYSVAEQEFRQYIDSYPSSSRSADANFWLGEALYSQGKYNDAAKTFLN 294
Query: 253 IQERYPQGYWARYVETLVK 271
++Y + E L+K
Sbjct: 295 AHQKYSTSE--KAPEMLLK 311
Score = 39.8 bits (90), Expect = 0.37, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 32/76 (42%)
Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243
++ A +G +G+Y A F YS +E A E + +L + AL
Sbjct: 263 PSSSRSADANFWLGEALYSQGKYNDAAKTFLNAHQKYSTSEKAPEMLLKLGMSLAALDNK 322
Query: 244 DEAREVVSLIQERYPQ 259
D A + + +RYP+
Sbjct: 323 DTACATLREVTKRYPK 338
>gi|229829586|ref|ZP_04455655.1| hypothetical protein GCWU000342_01683 [Shuttleworthia satelles DSM
14600]
gi|229791575|gb|EEP27689.1| hypothetical protein GCWU000342_01683 [Shuttleworthia satelles DSM
14600]
Length = 494
Score = 40.2 bits (91), Expect = 0.30, Method: Composition-based stats.
Identities = 15/115 (13%), Positives = 34/115 (29%), Gaps = 1/115 (0%)
Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
Q S + + G G + A+ ++ ++
Sbjct: 341 AYQAFSSVNRDLLGDTGKADYDELNNKLADFKKKSAYTAGNTAYSAGNWQEAVNQYLPLV 400
Query: 218 ANYSDAEHAE-EAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+ + A + + A+ RL AY L D A + + ++ + +K
Sbjct: 401 QDKASAGYEDGAALYRLASAYNKLGDRDNAVKYYEQLLTDLTGSHYRTSAKKDLK 455
>gi|153006229|ref|YP_001380554.1| hypothetical protein Anae109_3386 [Anaeromyxobacter sp. Fw109-5]
gi|152029802|gb|ABS27570.1| TPR repeat-containing protein [Anaeromyxobacter sp. Fw109-5]
Length = 1162
Score = 40.2 bits (91), Expect = 0.30, Method: Composition-based stats.
Identities = 16/76 (21%), Positives = 27/76 (35%), Gaps = 1/76 (1%)
Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD-EAREVV 250
K + R V A+ ++ ++A Y +E + L E D EA +
Sbjct: 144 KSEKADLEDQSRKLQVQAVALYKAIIAKYPKYPRLDEVLYFLAENLSQRDRFDPEALKAY 203
Query: 251 SLIQERYPQGYWARYV 266
+ ERYP +
Sbjct: 204 RALIERYPSSRYVPDA 219
Score = 39.8 bits (90), Expect = 0.38, Method: Composition-based stats.
Identities = 30/235 (12%), Positives = 68/235 (28%), Gaps = 23/235 (9%)
Query: 34 FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93
L ++ Y+ A + + F++A + F + + D P +A
Sbjct: 565 LLASC-----ERYLEYQPKGEKWVEIAYKAANIHYRHNAFAEATDLFTRIALDHPSHELA 619
Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153
S + G ++ + + K + + Q + ++
Sbjct: 620 GYSTNLVLDAYNLLGDWRNVNGWAKRFYANAALVKAHPALKDDLARVIEQSAFKIIEERE 679
Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL-KRGEYVAAIPR 212
+ + + F +++LA + + A+
Sbjct: 680 KARD------------YEAAAEEYIAFSRDWPQSRLAPTALYNASVDYGRAHRLDRAMEV 727
Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
+ LA Y E A +++ EA+ A+A A ++ W R E
Sbjct: 728 REQFLARYPGHELAPKSLYDNAEAFEAIADFSRAADLYERYFR-----EWKRGAE 777
>gi|323697805|ref|ZP_08109717.1| tol-pal system protein YbgF [Desulfovibrio sp. ND132]
gi|323457737|gb|EGB13602.1| tol-pal system protein YbgF [Desulfovibrio desulfuricans ND132]
Length = 319
Score = 40.2 bits (91), Expect = 0.31, Method: Composition-based stats.
Identities = 15/118 (12%), Positives = 38/118 (32%), Gaps = 5/118 (4%)
Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE-----VEIGRYYLKRGEYVAAIPR 212
+ Y Y + ++ G+ Y +Y A+
Sbjct: 198 AKALYDKAYALYKEGNYERARSYWAEFTDTFKGHAFTPSAVFWQGQCYYMLKDYARAVIL 257
Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
++ V+ Y + + A+ R ++ L + A+ I +++P+ A + +
Sbjct: 258 YEDVIEKYQKSSKYKAALLRAGYSWERLGKPELAKMRFEEIIKKFPKTVEATQAKRSL 315
Score = 38.2 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 23/134 (17%), Positives = 50/134 (37%), Gaps = 8/134 (5%)
Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
D + +Y+KA KE N+ +A Y+ + + F ++ Y Y +
Sbjct: 194 DTDPAKALYDKAYALYKEGNYERARSYWAEFTDTFKGHAFTPSAVFWQGQCYYMLKDYAR 253
Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
A L E+ I +Y +S G S+ ++ + +L I++++ +
Sbjct: 254 AVILYEDVIEKYQKSSKYKAALLRAGYSWERLGKP--------ELAKMRFEEIIKKFPKT 305
Query: 173 PYVKGARFYVTVGR 186
A+ + +
Sbjct: 306 VEATQAKRSLDKMK 319
>gi|322435204|ref|YP_004217416.1| Tetratricopeptide repeat [Acidobacterium sp. MP5ACTX9]
gi|321162931|gb|ADW68636.1| Tetratricopeptide repeat [Acidobacterium sp. MP5ACTX9]
Length = 315
Score = 40.2 bits (91), Expect = 0.31, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 26/78 (33%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+G + G+Y A + VL + D A +A + L D +
Sbjct: 227 YYYLGEIDYRAGKYATAARSYDRVLEQFPDNNKIPAAYLHKGQALIELKQTDAGVRELRA 286
Query: 253 IQERYPQGYWARYVETLV 270
+ +R+P A +
Sbjct: 287 LIQRFPSSPEATQARAKL 304
Score = 36.7 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 12/72 (16%), Positives = 21/72 (29%)
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
A + + +Y A F ++ Y + A A L E A
Sbjct: 186 TAQELYKSAYGDYMAAKYPVASSEFGDIIKAYPNDTLAGNAYYYLGEIDYRAGKYATAAR 245
Query: 249 VVSLIQERYPQG 260
+ E++P
Sbjct: 246 SYDRVLEQFPDN 257
>gi|238026335|ref|YP_002910566.1| hypothetical protein bglu_1g06690 [Burkholderia glumae BGR1]
gi|237875529|gb|ACR27862.1| Hypothetical protein bglu_1g06690 [Burkholderia glumae BGR1]
Length = 249
Score = 40.2 bits (91), Expect = 0.31, Method: Composition-based stats.
Identities = 16/111 (14%), Positives = 30/111 (27%)
Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
+ + + R + V + G++ A F+
Sbjct: 94 RQQRDAYTDLDARLKKFEPQQTTVDGVEGTVQPGETDAFNAASQQFRSGDFKGAAASFRA 153
Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
+A Y + + A L A AL + + + YPQ A
Sbjct: 154 FIAKYPQSPYQPVAQYWLGNAQYALRDYKGSTATWQALVKAYPQHPRAGDA 204
>gi|187466320|emb|CAQ51812.1| transmembrane and tetratricopeptide repeat containing 1 [Mus
musculus]
Length = 631
Score = 40.2 bits (91), Expect = 0.31, Method: Composition-based stats.
Identities = 23/230 (10%), Positives = 59/230 (25%), Gaps = 11/230 (4%)
Query: 30 IAVCFLVGWERQSSRDVYLDSVTDVRY--------QREVYEKAVLFLKEQNFSKAYEYFN 81
+ + L W+ +++L + R + Y A + +A ++
Sbjct: 197 VLLLLLFSWKTVKQNEIWLSRESLFRSGVQTLPHNAKVHYNYANFLKDQGRNKEAIYHYR 256
Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
+ +P A +L A Y Q A + +
Sbjct: 257 TALKLYPRHASALNNLGTLTKDMAEAKMYYQKALQLHPQHNRALFNLGNLLKSQEKTEEA 316
Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
++++ ++ ++ + + + +
Sbjct: 317 IMLLKESIKYGPDFADAYSSLASLLAEQERFKEAEDIYQAGIKNCPDSSDLHNNYAVFLV 376
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
G A+ +Q + + A+ L Y +L +A E
Sbjct: 377 DSGFPEKAVAHYQQAIQL---SPSHHVAVVNLGRLYRSLGENSKAEEWYR 423
>gi|149372385|ref|ZP_01891573.1| hypothetical protein SCB49_01247 [unidentified eubacterium SCB49]
gi|149354775|gb|EDM43338.1| hypothetical protein SCB49_01247 [unidentified eubacterium SCB49]
Length = 987
Score = 40.2 bits (91), Expect = 0.31, Method: Composition-based stats.
Identities = 29/227 (12%), Positives = 62/227 (27%), Gaps = 15/227 (6%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYE------------YFNQCSRDFPFAGVARKSLL 98
+ YQ+ + + + E ++ ++ E F + + + +
Sbjct: 400 ENKLAYQKVAFYRGLELYNEGDYKQSREFLNLSLKEPREPVFTARATYWVAENDFQLNNF 459
Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
A V Y AS EY T + + + + T+
Sbjct: 460 EEALVGYKQFLQLPNASSTPEYATSSYNLAYNHFKLKQYPEAISNFKKYTTGTTETTREK 519
Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE---IGRYYLKRGEYVAAIPRFQL 215
Y+ + S Y K Y K+ Y + I
Sbjct: 520 DAYLRLGDSYFVTSDYWKAMENYNKAVELNSPDKDYAAFQKAISYGFVDRTDSKITELSA 579
Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
+ Y + + ++A+ L +Y + +EA + P +
Sbjct: 580 FGSKYPKSFYRDDALYELGNSYASQNKNNEAISAYDKLITSLPNSSY 626
Score = 37.9 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 28/219 (12%), Positives = 59/219 (26%), Gaps = 4/219 (1%)
Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
+ R+ V D++ ++ + F + + F++A +YFN+ S + A+
Sbjct: 101 SYARKWYDKVDGDNLPPSEREKYYFNNGYAFFQNKRFNEAKKYFNRVSDSKEYGSQAKYY 160
Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
L A+ + E+ E + + I +
Sbjct: 161 LGFIAYEGDDYQEANDLFEGVEQTEETDKELSYFKADMNFKLGKFQEAIDLGLEQYDRSS 220
Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
+ + + K A + + + YY Y +
Sbjct: 221 PAEKSELSKIIGESYFNQEKYAEAIPYLKAYKGKKGKWNNTDYYQLGYAYYKQAQYANAI 280
Query: 217 LANYS----DAEHAEEAMARLVEAYVALALMDEAREVVS 251
A+ A L E+YV +A
Sbjct: 281 GEFNKIIDGRNAVAQNAYYHLAESYVKTEKKQQALNAFK 319
>gi|153832523|ref|ZP_01985190.1| Tol system periplasmic component YbgF [Vibrio harveyi HY01]
gi|148871318|gb|EDL70190.1| Tol system periplasmic component YbgF [Vibrio harveyi HY01]
Length = 251
Score = 40.2 bits (91), Expect = 0.31, Method: Composition-based stats.
Identities = 11/93 (11%), Positives = 31/93 (33%)
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
+F + +A + + + +Y D+ +A+ +L +
Sbjct: 159 QFQKDYPDSTYSANSHYWLGQLYFAKKQDKEAVKSFAAVVSYKDSNKRADALVKLGDIAE 218
Query: 239 ALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+A++ + + YP A+ + +K
Sbjct: 219 RNKNDAQAKKYYQQVVDEYPGSASAKVAASKLK 251
>gi|119485063|ref|ZP_01619448.1| TPR repeat protein [Lyngbya sp. PCC 8106]
gi|119457291|gb|EAW38416.1| TPR repeat protein [Lyngbya sp. PCC 8106]
Length = 612
Score = 40.2 bits (91), Expect = 0.31, Method: Composition-based stats.
Identities = 35/210 (16%), Positives = 67/210 (31%), Gaps = 8/210 (3%)
Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
R +Y++A+++L +Q F +A Q P +A ++L ++ +Q + +Q
Sbjct: 10 TARNLYQQAIVYLHQQQFQQAIVSCQQALEHQPQFALAYQTLGIALQLQGQEEEAKQYYL 69
Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
E ES Y ++ + I + Y I + T
Sbjct: 70 KAVEIQPDLAESYANLGSIYTKQKNWQKAIETYKKVVKIQPNAATYYRNIAQILTQLNQQ 129
Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA----EHAEEAMA 231
+ A Y + + +L G + + + Y + EA
Sbjct: 130 EEATQY--WYQALKLEPDWATPEEHLTLGNMLLKFEKPLPAITCYQRTIKLKPASFEAAH 187
Query: 232 RLVEAYVALALMDEA-REVVSLIQERYPQG 260
L EA+ L EA ++ P
Sbjct: 188 NLGEAFSQLERWQEAIENYKKALELN-PSS 216
>gi|330968883|gb|EGH68949.1| tol-pal system protein YbgF [Pseudomonas syringae pv. aceris str.
M302273PT]
Length = 208
Score = 40.2 bits (91), Expect = 0.31, Method: Composition-based stats.
Identities = 16/111 (14%), Positives = 36/111 (32%), Gaps = 1/111 (0%)
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI-GRYYLKRGEYVAAIPRFQLVLANY 220
I + + F + A G L +G+ A F V Y
Sbjct: 96 FDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGDLQGAGQAFAKVSQQY 155
Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+++ +L + L D+ + ++ + +YP A+ + ++
Sbjct: 156 PKHAKVPDSLYKLADVERRLGHTDKVKGILQQVVAQYPGTSAAQLAQRDLQ 206
Score = 38.2 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 32/83 (38%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
D ++ YE A +K ++F KA + F R +P + A + V + G
Sbjct: 81 EPPDPAKEKLYYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGD 140
Query: 110 YQQAASLGEEYITQYPESKNVDY 132
Q A + QYP+ V
Sbjct: 141 LQGAGQAFAKVSQQYPKHAKVPD 163
Score = 38.2 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 14/67 (20%), Positives = 28/67 (41%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
E +K ++ A F L Y ++ +A A L E +A + A + +
Sbjct: 91 YYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGDLQGAGQAFAK 150
Query: 253 IQERYPQ 259
+ ++YP+
Sbjct: 151 VSQQYPK 157
>gi|288929510|ref|ZP_06423354.1| putative TPR domain protein [Prevotella sp. oral taxon 317 str.
F0108]
gi|288329015|gb|EFC67602.1| putative TPR domain protein [Prevotella sp. oral taxon 317 str.
F0108]
Length = 1135
Score = 40.2 bits (91), Expect = 0.31, Method: Composition-based stats.
Identities = 9/72 (12%), Positives = 23/72 (31%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ K + + + NY + +A L Y+ A+ +
Sbjct: 600 FHSGVIFKDKLDNLALSEKALRRLTDNYPQFDKMPQAYYHLFLLYMRKGDKVTAQRYADM 659
Query: 253 IQERYPQGYWAR 264
++++YP+
Sbjct: 660 LKQQYPKHELTE 671
>gi|39996798|ref|NP_952749.1| TPR domain protein [Geobacter sulfurreducens PCA]
gi|39983686|gb|AAR35076.1| TPR domain protein [Geobacter sulfurreducens PCA]
Length = 626
Score = 40.2 bits (91), Expect = 0.31, Method: Composition-based stats.
Identities = 21/202 (10%), Positives = 45/202 (22%), Gaps = 6/202 (2%)
Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
+ F KA + Q + P +L Q G ++ +
Sbjct: 75 GKFYADNGFFLKAIAVYKQIQKIDPSNSGTSLTLATLNEKQGLVGNALAEYKAVYDFYEK 134
Query: 124 YPESKN------VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
+ + + ++ + D T Q + +
Sbjct: 135 SGQLREGVKVLERMHSLDRENITIRLKLADTRNKIGQTDEAYQEFTVLAREIRAKGDAAA 194
Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
+ + L+ +D A+ L +A
Sbjct: 195 YGRICERIGQLFPERREFLLVVAEDELAAGNHAAALPLLKQFANDERFNPRALYLLADAS 254
Query: 238 VALALMDEAREVVSLIQERYPQ 259
A + A + + I YP
Sbjct: 255 RAAGDLKTASDAYNRIVLNYPG 276
>gi|226288700|gb|EEH44212.1| DnaJ domain-containing protein [Paracoccidioides brasiliensis Pb18]
Length = 747
Score = 40.2 bits (91), Expect = 0.31, Method: Composition-based stats.
Identities = 26/228 (11%), Positives = 60/228 (26%), Gaps = 19/228 (8%)
Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL---LMSAFVQYSAGKYQQAASLGEE 119
F K ++ KA + + + P + + +SA A + + A E
Sbjct: 251 AGNKFFKAGDYQKAIQEYTKAVEAQPSSSTYLSNRAAAYISAHQYLEALEDAKLADELEP 310
Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
+ Y + + + A +
Sbjct: 311 GNQKIMHRLARIYTSLGRPVEALDIYSKIQPPVSAKDKGPSEAMLHHITQAEESLREDKG 370
Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY------------SDAEHAE 227
+T+ A K + G ++ + + ++ N D
Sbjct: 371 GSMTLYCLDQAVKGLGAGIQQPRKWKLMRVEAYLKMGSVNALGDAQNIVMSILRDNNQDP 430
Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQG----YWARYVETLVK 271
+A+ + A ++A + L P + R V+ L++
Sbjct: 431 DALFLRGRLFYAQGENEQAIKHFKLALSLDPDSSQAIKYLRMVQKLLR 478
>gi|225620098|ref|YP_002721355.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
gi|225214917|gb|ACN83651.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
Length = 346
Score = 40.2 bits (91), Expect = 0.31, Method: Composition-based stats.
Identities = 14/122 (11%), Positives = 39/122 (31%), Gaps = 10/122 (8%)
Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
++ + ++ S Y + +A K G Y
Sbjct: 185 YFNMNEYDRAFETYEDFLKYNKTSIYYDEVVRTYLIQVPAMAHKTFIEGNYI-------K 237
Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
+ + + + E+ E+A+ R+ ++Y ++A + + ++ + E
Sbjct: 238 SRMYYTKIAELFPRTEYGEDALFRIAQSYYNEKNYNKALDYYNRVRLN---NVYTLDAEA 294
Query: 269 LV 270
L+
Sbjct: 295 LL 296
>gi|330959273|gb|EGH59533.1| tol-pal system protein YbgF [Pseudomonas syringae pv. maculicola
str. ES4326]
Length = 207
Score = 40.2 bits (91), Expect = 0.31, Method: Composition-based stats.
Identities = 20/205 (9%), Positives = 50/205 (24%), Gaps = 1/205 (0%)
Query: 68 LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127
++ Q K + + + A+ +
Sbjct: 1 MQLQQMQDEIARLRGVVEVQQNDIQRMKQEALERYQELDQRIASGTAAPATNNSQPSGGA 60
Query: 128 KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
+ + P + I + + F +
Sbjct: 61 IDASGAPSASAAQAPAAGTEPPDPAKEKLYYEAAFDLIKAKDFDKASQAFTAFLRKYPNS 120
Query: 188 QLAAKEVEI-GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
A G L +G+ A F V Y +++ +L + L D+
Sbjct: 121 SYAGNAQYWLGEVNLAKGDLQGAGQAFAKVSQQYPKHAKVPDSLYKLADVERRLGHTDKV 180
Query: 247 REVVSLIQERYPQGYWARYVETLVK 271
+ ++ + +YP A+ + ++
Sbjct: 181 KGILQQVVAQYPGTSAAQLAQRDLQ 205
Score = 37.5 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 32/83 (38%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
D ++ YE A +K ++F KA + F R +P + A + V + G
Sbjct: 80 EPPDPAKEKLYYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGD 139
Query: 110 YQQAASLGEEYITQYPESKNVDY 132
Q A + QYP+ V
Sbjct: 140 LQGAGQAFAKVSQQYPKHAKVPD 162
>gi|302187149|ref|ZP_07263822.1| tol-pal system protein YbgF [Pseudomonas syringae pv. syringae 642]
Length = 208
Score = 40.2 bits (91), Expect = 0.31, Method: Composition-based stats.
Identities = 16/111 (14%), Positives = 36/111 (32%), Gaps = 1/111 (0%)
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI-GRYYLKRGEYVAAIPRFQLVLANY 220
I + + F + A G L +G+ A F V Y
Sbjct: 96 FDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGDLQGAGQAFAKVSQQY 155
Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+++ +L + L D+ + ++ + +YP A+ + ++
Sbjct: 156 PKHAKVPDSLYKLADVERRLGHTDKVKGILQQVVAQYPGTSAAQLAQRDLQ 206
Score = 38.2 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 32/83 (38%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
D ++ YE A +K ++F KA + F R +P + A + V + G
Sbjct: 81 EPPDPAKEKLYYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGD 140
Query: 110 YQQAASLGEEYITQYPESKNVDY 132
Q A + QYP+ V
Sbjct: 141 LQGAGQAFAKVSQQYPKHAKVPD 163
Score = 38.2 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 14/67 (20%), Positives = 28/67 (41%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
E +K ++ A F L Y ++ +A A L E +A + A + +
Sbjct: 91 YYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGDLQGAGQAFAK 150
Query: 253 IQERYPQ 259
+ ++YP+
Sbjct: 151 VSQQYPK 157
>gi|332528332|ref|ZP_08404332.1| hypothetical protein HGR_00485 [Hylemonella gracilis ATCC 19624]
gi|332042203|gb|EGI78529.1| hypothetical protein HGR_00485 [Hylemonella gracilis ATCC 19624]
Length = 291
Score = 40.2 bits (91), Expect = 0.32, Method: Composition-based stats.
Identities = 23/113 (20%), Positives = 43/113 (38%), Gaps = 14/113 (12%)
Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
+ ++RY +S Y A F++ G +Y AI F+++L
Sbjct: 174 AQNAFAEFIKRYPSSGYAPSAFFWL--------------GNAQYATQDYKEAIENFRILL 219
Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
+ D A EA+ + V L AR+ + + + YP+ A + +
Sbjct: 220 SQSQDHARAPEAVLAIANCQVELKDTKGARKTLEELIKAYPKSDAAATAKQRL 272
Score = 37.5 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 14/72 (19%), Positives = 26/72 (36%)
Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
+ ++ E G ++G++ A F + Y + +A A L A A
Sbjct: 147 REFLAERAERRDFETGLGLFRKGDFPGAQNAFAEFIKRYPSSGYAPSAFFWLGNAQYATQ 206
Query: 242 LMDEAREVVSLI 253
EA E ++
Sbjct: 207 DYKEAIENFRIL 218
>gi|330950599|gb|EGH50859.1| tol-pal system protein YbgF [Pseudomonas syringae Cit 7]
Length = 208
Score = 40.2 bits (91), Expect = 0.32, Method: Composition-based stats.
Identities = 16/111 (14%), Positives = 36/111 (32%), Gaps = 1/111 (0%)
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI-GRYYLKRGEYVAAIPRFQLVLANY 220
I + + F + A G L +G+ A F V Y
Sbjct: 96 FDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGDLQGAGQAFAKVSQQY 155
Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+++ +L + L D+ + ++ + +YP A+ + ++
Sbjct: 156 PKHAKVPDSLYKLADVERRLGHTDKVKGILQQVVAQYPGTSAAQLAQRDLQ 206
Score = 38.2 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 32/83 (38%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
D ++ YE A +K ++F KA + F R +P + A + V + G
Sbjct: 81 EPPDPAKEKLYYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGD 140
Query: 110 YQQAASLGEEYITQYPESKNVDY 132
Q A + QYP+ V
Sbjct: 141 LQGAGQAFAKVSQQYPKHAKVPD 163
Score = 38.2 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 14/67 (20%), Positives = 28/67 (41%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
E +K ++ A F L Y ++ +A A L E +A + A + +
Sbjct: 91 YYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGDLQGAGQAFAK 150
Query: 253 IQERYPQ 259
+ ++YP+
Sbjct: 151 VSQQYPK 157
>gi|308185022|ref|YP_003929155.1| paralysed flagella protein [Helicobacter pylori SJM180]
gi|308060942|gb|ADO02838.1| paralysed flagella protein [Helicobacter pylori SJM180]
Length = 801
Score = 40.2 bits (91), Expect = 0.32, Method: Composition-based stats.
Identities = 9/53 (16%), Positives = 17/53 (32%)
Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
NY + EA+ + +A +A I Y +A + +
Sbjct: 260 KNYPTDPNIPEALYYVAKALDENNNYKQAVRYYKRILLEYKNSRYAPLAQMRL 312
>gi|298505811|gb|ADI84534.1| TPR domain protein [Geobacter sulfurreducens KN400]
Length = 617
Score = 40.2 bits (91), Expect = 0.32, Method: Composition-based stats.
Identities = 21/202 (10%), Positives = 45/202 (22%), Gaps = 6/202 (2%)
Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
+ F KA + Q + P +L Q G ++ +
Sbjct: 66 GKFYADNGFFLKAIAVYKQIQKIDPSNSGTSLTLATLNEKQGLVGNALAEYKAVYDFYEK 125
Query: 124 YPESKN------VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
+ + + ++ + D T Q + +
Sbjct: 126 SGQLREGVKVLERMHSLDRENITIRLKLADTRNKIGQTDEAYQEFTVLAREIRAKGDAAA 185
Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
+ + L+ +D A+ L +A
Sbjct: 186 YGRICERIGQLFPERREFLLVVAEDELAAGNHAAALPLLKQFANDERFNPRALYLLADAS 245
Query: 238 VALALMDEAREVVSLIQERYPQ 259
A + A + + I YP
Sbjct: 246 RAAGDLKTASDAYNRIVLNYPG 267
>gi|238897412|ref|YP_002923089.1| putative periplasmic protein contains a protein prenylyltransferase
domain [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
gi|229465167|gb|ACQ66941.1| putative periplasmic protein contains a protein prenylyltransferase
domain [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
Length = 257
Score = 40.2 bits (91), Expect = 0.32, Method: Composition-based stats.
Identities = 11/106 (10%), Positives = 39/106 (36%), Gaps = 2/106 (1%)
Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
+ + + +N + ++ + AI + Q + YS++ +
Sbjct: 110 ITLKNTDNKNRATKVATPESKNNEKKDYDAALFFIFEKKDDDQAIIKLQHFVEEYSESIY 169
Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
A L + + + ++A +++ ++Y + + + ++K
Sbjct: 170 RPNAYYWLGQLFYNKGMKNKASYYYAVLVKKYHKSP--KRPDAMLK 213
Score = 39.4 bits (89), Expect = 0.57, Method: Composition-based stats.
Identities = 16/124 (12%), Positives = 42/124 (33%), Gaps = 14/124 (11%)
Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
++++ + + VE Y+ S Y A +++ K
Sbjct: 142 FFIFEKKDDDQAIIKLQHFVEEYSESIYRPNAYYWLGQLFYNKGMKN------------- 188
Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
A + +++ Y + +AM ++ D+A+++ + E YP +
Sbjct: 189 -KASYYYAVLVKKYHKSPKRPDAMLKVGMIMQETGKTDKAKQIYQRVIEEYPLSAAKKEA 247
Query: 267 ETLV 270
+ +
Sbjct: 248 QKKL 251
>gi|83746169|ref|ZP_00943223.1| Tol system periplasmic component YbgF [Ralstonia solanacearum
UW551]
gi|83727135|gb|EAP74259.1| Tol system periplasmic component YbgF [Ralstonia solanacearum
UW551]
Length = 232
Score = 40.2 bits (91), Expect = 0.32, Method: Composition-based stats.
Identities = 26/204 (12%), Positives = 55/204 (26%), Gaps = 15/204 (7%)
Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
+N A + + L + K A + ++
Sbjct: 40 NSRNLIDAQNQIETLKSEVARLRGQNEQLQNTVDTLTKQQKDYYADLDARLKRFEPQQAT 99
Query: 129 NVDY-VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
G + K S V++Y SPY+ A+F++
Sbjct: 100 VDGRDGMVQPGEKDEYDAALKTFQGGDFKGAGNQFSAFVKKYPQSPYLPLAQFWL----- 154
Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
G + +Y + + + A EA+ ++ AR
Sbjct: 155 ---------GNALYAQRDYKGSTYVLENMARANPQHPKAPEALLQVATNQGESGQKAAAR 205
Query: 248 EVVSLIQERYPQGYWARYVETLVK 271
+ + + +YP A+ + +K
Sbjct: 206 KTLEAVVVQYPGTEQAKTASSRLK 229
>gi|75907232|ref|YP_321528.1| hypothetical protein Ava_1009 [Anabaena variabilis ATCC 29413]
gi|75700957|gb|ABA20633.1| TPR repeat protein [Anabaena variabilis ATCC 29413]
Length = 269
Score = 40.2 bits (91), Expect = 0.32, Method: Composition-based stats.
Identities = 30/241 (12%), Positives = 59/241 (24%), Gaps = 36/241 (14%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQ--REVYEKAVLFLKEQNFSKAYE 78
I +++ L GW S+T + E +A + +F A +
Sbjct: 1 MIIKLISVVLSLLVLFGWGTPVMAQSPQPSITQEQIAQGEEWKNQAFKATNKGDFVTAEK 60
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
Y+ + +FP A + + + + + N
Sbjct: 61 YWTKIIDNFPTNAGAWSNRGN--------------SRVSQNKLQAALTDFNKAIELAPNV 106
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
+ + +++ N A G
Sbjct: 107 TDPYLNRGTALEGLGKWSEAIADYNHVLDLDPN-----------------DAMAYNNRGN 149
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
G++ AI ++ + A A A DEA + I +YP
Sbjct: 150 AKAGLGKWSEAIADYKKSFEIAPNFAF---ARANYAIALYETGQKDEAIREMRNIVRKYP 206
Query: 259 Q 259
Sbjct: 207 N 207
>gi|307637945|gb|ADN80395.1| Paralysed flagellar protein [Helicobacter pylori 908]
gi|325996549|gb|ADZ51954.1| Paralysed flagella protein [Helicobacter pylori 2018]
gi|325998138|gb|ADZ50346.1| Paralysed flagella protein [Helicobacter pylori 2017]
Length = 801
Score = 40.2 bits (91), Expect = 0.32, Method: Composition-based stats.
Identities = 27/202 (13%), Positives = 55/202 (27%), Gaps = 17/202 (8%)
Query: 70 EQNFSKAYEYFNQ----CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP 125
++++ KA F + + L + + I Q
Sbjct: 121 DRDYKKAIPLFVENDAKAKMWQIIGYDQKIPFLSEKDNAQKGLNFPIIIKDAQTPIIQEL 180
Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
+ N + A + D +A L+ +SR + Y + + K +
Sbjct: 181 DVNNKPLLTTKGYDLNAYLEAKKQMDSQAYFDALRTISRAFKNYPQTIFKKDLYLLEIIA 240
Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
+L K+ I + NY + EA+ + +A +
Sbjct: 241 LGKLGIKK-------------SLLIDIGTQWIKNYPTDPNIPEALYYVAKALDENNNYKQ 287
Query: 246 AREVVSLIQERYPQGYWARYVE 267
A I Y +A +
Sbjct: 288 AVRYYKRILLEYKNSRYAPLAQ 309
>gi|261856879|ref|YP_003264162.1| hypothetical protein Hneap_2305 [Halothiobacillus neapolitanus c2]
gi|261837348|gb|ACX97115.1| hypothetical protein Hneap_2305 [Halothiobacillus neapolitanus c2]
Length = 180
Score = 40.2 bits (91), Expect = 0.32, Method: Composition-based stats.
Identities = 13/111 (11%), Positives = 31/111 (27%), Gaps = 8/111 (7%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
KF I I L Q +++ + ++A E + ++A
Sbjct: 5 IKFDTIIPILITSLLLSACATQPHKELS--------EVMRLQQQAQTNYNEGDLTQAQSD 56
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
+ + +R P L + A + + ++ +
Sbjct: 57 YLELTRVLPGDESNWFHLANTYARAGQLELAVNAYRHVLAHDATHAKAWHN 107
>gi|91216109|ref|ZP_01253077.1| tetratricopeptide repeat domain protein [Psychroflexus torquis ATCC
700755]
gi|91185626|gb|EAS72001.1| tetratricopeptide repeat domain protein [Psychroflexus torquis ATCC
700755]
Length = 605
Score = 40.2 bits (91), Expect = 0.32, Method: Composition-based stats.
Identities = 29/210 (13%), Positives = 70/210 (33%), Gaps = 3/210 (1%)
Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
+A L + + F++A + Q + P +AR++ A Y G + A + + +
Sbjct: 390 QADLMVLDSKFNQALLLYTQVEKLIPNTDIAREARFKVAKTSYYRGDFDWALTQLKVLKS 449
Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
+ D + + + + D + + + + +
Sbjct: 450 SASQLTANDAMELALLIKDNSQEDTLRTDLKLVAKA--DLLLFQNQPIQALTILEGVLED 507
Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV-ALA 241
+ + I + +L + A+P Q ++ +SD A+ A L Y+ L
Sbjct: 508 HQSPSIVDEVLFRIAKLHLANQDVEKALPYLQRIVDKHSDEILADNANFLLGTLYMDELK 567
Query: 242 LMDEAREVVSLIQERYPQGYWARYVETLVK 271
D+A+ + +P + +
Sbjct: 568 TPDQAKPYFETLIFNHPDSLYFVDARKRFR 597
>gi|313674445|ref|YP_004052441.1| hypothetical protein [Marivirga tractuosa DSM 4126]
gi|312941143|gb|ADR20333.1| Tetratricopeptide TPR_1 repeat-containing protein [Marivirga
tractuosa DSM 4126]
Length = 1022
Score = 40.2 bits (91), Expect = 0.33, Method: Composition-based stats.
Identities = 31/208 (14%), Positives = 63/208 (30%), Gaps = 22/208 (10%)
Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
QS V D Y +++KA L + + A F+ ++ P + + +
Sbjct: 594 ANQSFDKVIKDYSNSNYYDNAIFQKAQLAFESGQYETAINGFSNLLKNLPQSPLRPYAYS 653
Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
A ++ +Y+ A
Sbjct: 654 KRALAYFNLQQYENAEEDYTLI----------------------LQNYLTHSTANGALAG 691
Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
LQ + I+++ + A ++ E + + +Y AI F+ +
Sbjct: 692 LQELYSIMDKEGDLEQYLIAYKNANPNDGEVTKIEFDAAQSLYFNQKYDRAISSFKAYID 751
Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEA 246
NY D +A L ++Y ++EA
Sbjct: 752 NYPDHSLTADARYYLADSYYRNDQLNEA 779
Score = 39.0 bits (88), Expect = 0.69, Method: Composition-based stats.
Identities = 27/240 (11%), Positives = 66/240 (27%), Gaps = 14/240 (5%)
Query: 43 SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102
YQ+ + + + + N+ +A + F + + ++
Sbjct: 414 ESINNKSIKLKEAYQKVTFYQGAEYFNQANYYRAMQLFKKSVDYPQNKSLLGETYFWMGE 473
Query: 103 VQYSAGKYQQAASLGEEYITQ------YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
+ K++ A S E+ + + + N + + +
Sbjct: 474 SFSTGKKFKDAISSYEKSMRNSNSSDGWYANLNYGLAHAYYNDKQFEKSLQYFKEYLKNG 533
Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA------- 209
Y V R + YV + Y + V +
Sbjct: 534 KSATYYEDAVIRLADCYYVTKNYSLAINYYQKAIDDRNSNSDYAYFQKGVVNSIDGEIKL 593
Query: 210 -IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
F V+ +YS++ + + A+ + + + A S + + PQ Y +
Sbjct: 594 ANQSFDKVIKDYSNSNYYDNAIFQKAQLAFESGQYETAINGFSNLLKNLPQSPLRPYAYS 653
Score = 36.7 bits (82), Expect = 3.9, Method: Composition-based stats.
Identities = 41/218 (18%), Positives = 76/218 (34%), Gaps = 24/218 (11%)
Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99
+ + + +D Y Y A + ++ F K+ +YF + ++ A +++
Sbjct: 486 SSYEKSMRNSNSSDGWYANLNYGLAHAYYNDKQFEKSLQYFKEYLKNGKSATYYEDAVIR 545
Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
A Y Y A + ++ I + + Y V KL
Sbjct: 546 LADCYYVTKNYSLAINYYQKAIDDRNSNSDYAYF----------QKGVVNSIDGEIKLAN 595
Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219
Q ++++ Y+NS Y A F + + G+Y AI F +L N
Sbjct: 596 QSFDKVIKDYSNSNYYDNAIFQK--------------AQLAFESGQYETAINGFSNLLKN 641
Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
+ A ++ AY L + A E +LI + Y
Sbjct: 642 LPQSPLRPYAYSKRALAYFNLQQYENAEEDYTLILQNY 679
>gi|187735734|ref|YP_001877846.1| Tetratricopeptide TPR_2 repeat protein [Akkermansia muciniphila
ATCC BAA-835]
gi|187425786|gb|ACD05065.1| Tetratricopeptide TPR_2 repeat protein [Akkermansia muciniphila
ATCC BAA-835]
Length = 795
Score = 40.2 bits (91), Expect = 0.33, Method: Composition-based stats.
Identities = 28/212 (13%), Positives = 71/212 (33%), Gaps = 7/212 (3%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
++A+ L+++N S A + L +A + ++ I
Sbjct: 582 KEALETLQKENPS-AVARVPDVIPAWLGLQAYGMKDLETADKYMTWATQNDQLQNVKKVI 640
Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV---ERYTNSPYVKGA 178
+ + Y + + + + I+ +Y ++
Sbjct: 641 WRNLAKVRLALRKYDRALVASNNFLKDEDQPYRRADGMLDKASILLGLGKYADARKTAED 700
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY-SDAEHAEEAMARLVEAY 237
+ V +A+ ++ +G ++ A + + + +DAE +A+ + EA
Sbjct: 701 ALALGVEGPLMASLKIVLGDISYAEKKFDEAAKHYGVTAELFVNDAELKPKALFKAAEAL 760
Query: 238 VALALMDEAREVVSLIQERYPQGYWARYVETL 269
EA + + +Q+ +P W + E+L
Sbjct: 761 DKAGRKSEASQYRARLQKEFPD--WKQDGESL 790
Score = 36.3 bits (81), Expect = 5.2, Method: Composition-based stats.
Identities = 24/245 (9%), Positives = 53/245 (21%), Gaps = 33/245 (13%)
Query: 17 YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76
Y + K+ + Q + + T R + K + + KA
Sbjct: 273 YNMGKYREIL-------------SQYEQQKGIKMPTKDGQVRLLMLLGQSAYKLKEYRKA 319
Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
++F + + P+ A ++ + + +
Sbjct: 320 ADFFLEAEKSVPYTQEAMQASFYRLLCYNELKQKDLPQRAQSFLNHYAKAFPTSELHDMV 379
Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196
M+ S R + K
Sbjct: 380 RLMA-----------------AENLFSSNPADAARFYASIDFDKVPPKMRADILYKSAWA 422
Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
+ G A + ++ EA+ + Y EA + R
Sbjct: 423 IA---QAGNRGVAAKLLTDFINDFPKDPRICEALTLRGDMYAKTKKEAEALMDFDRVIAR 479
Query: 257 YPQGY 261
+P+
Sbjct: 480 WPKAE 484
>gi|172037655|ref|YP_001804156.1| hypothetical protein cce_2742 [Cyanothece sp. ATCC 51142]
gi|171699109|gb|ACB52090.1| unknown [Cyanothece sp. ATCC 51142]
Length = 270
Score = 40.2 bits (91), Expect = 0.33, Method: Composition-based stats.
Identities = 27/259 (10%), Positives = 60/259 (23%), Gaps = 14/259 (5%)
Query: 19 LYKFALTIFFSIAV---CFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
+ + L++ + + +G + ++ +KA+ + +F +
Sbjct: 1 MIRCILSVLIILVLWAGVTPIGLAQTQENPTIIEEKVQQGEAIA--QKAIEATENGDFGQ 58
Query: 76 AYEYFNQCSRDFPFAGVARKSL-LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
A Y+ + FP + + N
Sbjct: 59 AEAYWTELVEAFPSNPAVWSNRGNARVSQNKLEAAIADFNEAIKLAPDAPDPYLNRGTAL 118
Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG--ARFYVTVGRNQLAAK 192
G A + + + Y +R + K A
Sbjct: 119 EGQGNYEAAIADYNRVLELNPNDAMAYNNRGNAESGQGDWDKALTDYQKAVEIAPNFAFA 178
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE---V 249
Y + G AI + ++ Y A+ + EA
Sbjct: 179 RANAALVYYQIGNQGEAITEMRNLVRKYPMFPDMRAAL---TAVLWNMGQQGEAESHWVA 235
Query: 250 VSLIQERYPQGYWARYVET 268
+ RY W + +
Sbjct: 236 AVGMDNRYQDLNWVKNIRR 254
>gi|299769711|ref|YP_003731737.1| hypothetical protein AOLE_07365 [Acinetobacter sp. DR1]
gi|298699799|gb|ADI90364.1| hypothetical protein AOLE_07365 [Acinetobacter sp. DR1]
Length = 287
Score = 40.2 bits (91), Expect = 0.33, Method: Composition-based stats.
Identities = 19/114 (16%), Positives = 38/114 (33%), Gaps = 13/114 (11%)
Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
K + M ++ + NS Y A F++ Y A + +
Sbjct: 186 KKAIAPMQNFIKNHPNSVYTGNAYFWLAEFNL------------ATDPVNYNEAKKNYNV 233
Query: 216 VLANYSDAEHAEEAMARLVEAYVALAL-MDEAREVVSLIQERYPQGYWARYVET 268
V Y ++ A A+ +L + A + + I +YP+ A++
Sbjct: 234 VATRYPNSSKAPRALYQLYSIAKDVDKNPASANQYKTKILSQYPKSEEAKFFNK 287
>gi|159030624|emb|CAO88292.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 722
Score = 40.2 bits (91), Expect = 0.33, Method: Composition-based stats.
Identities = 31/232 (13%), Positives = 75/232 (32%), Gaps = 3/232 (1%)
Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
+RD + + + + + + KAY+ + + + A + L ++
Sbjct: 216 NQARDRLVKDYANQLTPADWAMIGAGYWQSGLYEKAYKAYAKATPSPEQAYRYARGLQIA 275
Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
+ + YQ+ + + + + A + R V L+
Sbjct: 276 KKLPEARSAYQKLIKTYPQAPETGLGLLRLAQI-SPNRDAIAYLDRIVKQFPDRAPEALE 334
Query: 161 YMSRIVERYTNS--PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
++++ ++ A + + K G+Y A Q +
Sbjct: 335 AKAKLLNSTNAQAASQTWQTLLNKYPKSDEAADYRWLMAQRAAKSGDYAKAWQWAQPIAV 394
Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
N D++ A +A + + L EA++ + R+P Y+A L+
Sbjct: 395 NNPDSQTAPKAAFWVGKWAQKLGKNQEAKQAFTYTISRHPHSYYAWRSAVLL 446
>gi|123441416|ref|YP_001005403.1| putative fimbrial biogenesis protein [Yersinia enterocolitica
subsp. enterocolitica 8081]
gi|122088377|emb|CAL11168.1| putative fimbrial biogenesis protein [Yersinia enterocolitica
subsp. enterocolitica 8081]
Length = 249
Score = 40.2 bits (91), Expect = 0.33, Method: Composition-based stats.
Identities = 33/252 (13%), Positives = 69/252 (27%), Gaps = 17/252 (6%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
K + L G S V + R + + +L + + + A +
Sbjct: 1 MKLTRLWRVCLIATVLAGCSGSSPEKVSQSAAGQTRL-----QLGLEYLAQGDLTAARQN 55
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
+ P ++ L AF + G+ A ++ + P + V Y
Sbjct: 56 LEKAVAADPQD---YRAQLGMAFYEQRIGENDAAEQRYQQAMKLAPGNGTVLNNYGAFLC 112
Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN------QLAAKE 193
S Q + A ++ + N+ Y R + +
Sbjct: 113 SLGQYVPAQQQFSAAVLS--PDYGQVADSLENAGYCFLRANQNDQARVLLSRALKYDPDK 170
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDA-EHAEEAMARLVEAYVALALMDEAREVVSL 252
E +R + QL+L Y + E++ + D +
Sbjct: 171 GEPLLAEAQRHFGEGNRAQAQLLLDVYQHVLPASAESLWLQIRFAALAGRQDSVQRYGKQ 230
Query: 253 IQERYPQGYWAR 264
+ +PQ +
Sbjct: 231 LARSFPQSKQYQ 242
>gi|297181013|gb|ADI17214.1| soluble lytic murein transglycosylase and related regulatory
proteins (some contain lysm/invasin domains) [uncultured
delta proteobacterium HF0070_10I02]
Length = 693
Score = 40.2 bits (91), Expect = 0.33, Method: Composition-based stats.
Identities = 29/237 (12%), Positives = 70/237 (29%), Gaps = 23/237 (9%)
Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV--Q 104
L DV + + A + L + A + P + + ++ A +
Sbjct: 132 ELPKPDDVDPGQVRWLLAQVALAQGRDEAAQRQWESLWALNPTSAYSDQAEEELADAGLK 191
Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS- 163
K + + + + + + + +R+ A Y
Sbjct: 192 ILPNKQRGIDLITSRIRSLEKLYRYREALSLRQQLPTDHRLREPHRFAAAVFKAKDYARA 251
Query: 164 -RIVERYTNSPYVKG-------------------ARFYVTVGRNQLAAKEVEIGRYYLKR 203
++ +N + R+ + + ++G + +
Sbjct: 252 TNLLGALSNRSADEDILLALAQVRSGDPESSMRTYRYIAKGSGSTAELAKYKLGYMHWDQ 311
Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
G++ AI F L Y +HA+ A+ A + +AR + +Q +P+
Sbjct: 312 GQWSDAIQSFADYLIAYPTGKHADSALWFTAMAQMRFGANAQARNTLERLQSEHPRS 368
>gi|256823063|ref|YP_003147026.1| tol-pal system protein YbgF [Kangiella koreensis DSM 16069]
gi|256796602|gb|ACV27258.1| tol-pal system protein YbgF [Kangiella koreensis DSM 16069]
Length = 243
Score = 40.2 bits (91), Expect = 0.33, Method: Composition-based stats.
Identities = 16/122 (13%), Positives = 34/122 (27%), Gaps = 2/122 (1%)
Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
Q+A + S + Y A + + K
Sbjct: 121 NRAQQAYNQAFTLFNEQKYPQAKSAFKTFVSDYPKDSLASNAHYLLGQLHFSDKEYA--E 178
Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
A +F+ V + D ++AM +L + A+ + + +P R +
Sbjct: 179 AENQFKAVYEQFPDTSIKDKAMLKLAQVQELKGDKAAAKATYQQVSKLFPNTTAGRLAKA 238
Query: 269 LV 270
+
Sbjct: 239 KL 240
Score = 38.2 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 14/154 (9%), Positives = 33/154 (21%)
Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
+ + Q + + + +
Sbjct: 46 IMAELIMQVNQLQQEVRQLRGQVEQQDYRINQLTKQQRELYLDLDRRLQGGATLSTSETE 105
Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232
G + A + +Y A F+ +++Y A A
Sbjct: 106 ELSSDNANTSNNGASNRAQQAYNQAFTLFNEQKYPQAKSAFKTFVSDYPKDSLASNAHYL 165
Query: 233 LVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
L + + + EA + E++P
Sbjct: 166 LGQLHFSDKEYAEAENQFKAVYEQFPDTSIKDKA 199
>gi|312888741|ref|ZP_07748306.1| TPR repeat-containing protein [Mucilaginibacter paludis DSM 18603]
gi|311298785|gb|EFQ75889.1| TPR repeat-containing protein [Mucilaginibacter paludis DSM 18603]
Length = 1020
Score = 40.2 bits (91), Expect = 0.34, Method: Composition-based stats.
Identities = 27/204 (13%), Positives = 60/204 (29%), Gaps = 23/204 (11%)
Query: 68 LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127
++ + KA YF + L + + + + + + Y
Sbjct: 526 FGDEQYKKAATYFERFLAA---------EQLDKNSINDAITRTADSYFVMKNYGKAMDYY 576
Query: 128 KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
+ + + Q A + ++ ++ ++ NS Y + F
Sbjct: 577 DRIINGHEKGEDYALFQRGMIQGLQGALDSKINTLNSVLSQFPNSNYADDSAF------- 629
Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
EI Y +G AI ++A Y + + A+ + D A
Sbjct: 630 -------EIAYAYFMKGNGDKAISDLLAMIAKYPRSSYIPRALVTIGLVNYNAGKDDLAV 682
Query: 248 EVVSLIQERYPQGYWARYVETLVK 271
E + + YP A+ ++
Sbjct: 683 ESFKQVVKDYPSTDEAKQALKQIE 706
Score = 38.2 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 27/234 (11%), Positives = 63/234 (26%), Gaps = 9/234 (3%)
Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF-AGVARKSLLMSAFVQ 104
+ + + +Y A + +++S A F + + + + +
Sbjct: 174 SEVKNKKSPYTEDAIYYFAYIAYLNKDYSIALVNFEKLKNSKKYESSYPYYITAVYFLDK 233
Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
A + + QY + + L ++
Sbjct: 234 RYDDVLNYAIPIIKSTHQQYETELLRLIAASYFAKADFPDAMKYYTRFQDHDLGKTQNNQ 293
Query: 165 --------IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
+ +K V + +G ++K +A F +
Sbjct: 294 DTYQIGYASYKVADYQKAIKELEKLVDQTDIYSQSGSYTLGDVFIKVKNKQSARNAFFVA 353
Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
D + E+A+ + L +A E L + YP+ V+TL+
Sbjct: 354 SKLDFDPQLKEDALYEYSKLSYELDFNSQALESTRLYLKNYPRSAKLNEVKTLL 407
>gi|254515365|ref|ZP_05127426.1| putative PEP-CTERM system TPR-repeat lipoprotein [gamma
proteobacterium NOR5-3]
gi|219677608|gb|EED33973.1| putative PEP-CTERM system TPR-repeat lipoprotein [gamma
proteobacterium NOR5-3]
Length = 926
Score = 40.2 bits (91), Expect = 0.34, Method: Composition-based stats.
Identities = 16/203 (7%), Positives = 54/203 (26%)
Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
+G + +D+ Y + + L+ + ++ A + F+Q P A
Sbjct: 250 LGKAEDADKDLAQLEKLIPNYPEVNFLRGQLYFDDGDYKNAIDAFSQVLTANPNHAGALL 309
Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
+ + + Q+ + + + ++ +
Sbjct: 310 LSANANVREQNLATAQRQYTQFLTLQPGHLPASLQLANLSWQLGDASKTEELARNILKEH 369
Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
++ + + + + + ++ +
Sbjct: 370 EMNIPALGLLAMALSAQGLHAESAQAYQQIATLNPESTQAKVALGSQQMVAGDTEAGIEQ 429
Query: 216 VLANYSDAEHAEEAMARLVEAYV 238
+ A + +A RL+EA++
Sbjct: 430 LQAAVALDPSNAQARERLIEAHL 452
>gi|228949782|ref|ZP_04111992.1| hypothetical protein bthur0007_58710 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228809840|gb|EEM56251.1| hypothetical protein bthur0007_58710 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
Length = 328
Score = 40.2 bits (91), Expect = 0.34, Method: Composition-based stats.
Identities = 26/246 (10%), Positives = 63/246 (25%), Gaps = 22/246 (8%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFL---------- 68
+ + IF + F G Y D Q E KAV +
Sbjct: 1 MLRLKFVIFLLPLILFASGCGNTKEETKY---EKDFLTQVEAISKAVSKMTKIQKGDQSL 57
Query: 69 --KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126
++ + +A + + F K + S +Y+ + S + ++
Sbjct: 58 SSSQKEYKEALMELKEVIKGFKELVPDSKYEYQQKQLIKSMDEYESSISKLLKGMSDTKG 117
Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
S+ +D + + + V++ +
Sbjct: 118 SEWIDGIEQFNKATDMYVDAAGKIVDIRDGKTTGTSEEGVDKLSRQGDTATELETRAEPE 177
Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV-----EA--YVA 239
+ K + + ++ + E++ +L E Y +
Sbjct: 178 TTETQPSEQEKDTATKDTQTQTPEQEVKTEVSGTEEESSVEQSQQQLTVDKVKEIIEYYS 237
Query: 240 LALMDE 245
+ D+
Sbjct: 238 IGKNDK 243
>gi|148262275|ref|YP_001228981.1| hypothetical protein Gura_0192 [Geobacter uraniireducens Rf4]
gi|146395775|gb|ABQ24408.1| hypothetical protein Gura_0192 [Geobacter uraniireducens Rf4]
Length = 150
Score = 40.2 bits (91), Expect = 0.34, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 30/78 (38%), Gaps = 3/78 (3%)
Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE-AREVVSLIQ 254
+G+ ++ AI +L++YS + A EA+ + + +E +
Sbjct: 73 MGKTDFDTEQFNDAILHLDEILSSYSKSAAAPEAVYLRGVCRFKSSHDAKPLKEAYEKLA 132
Query: 255 ERYPQGYWARYV--ETLV 270
YP W + +L+
Sbjct: 133 SDYPDSEWVKRAQPYSLL 150
>gi|301617155|ref|XP_002938005.1| PREDICTED: intraflagellar transport protein 88 homolog [Xenopus
(Silurana) tropicalis]
Length = 826
Score = 40.2 bits (91), Expect = 0.34, Method: Composition-based stats.
Identities = 22/212 (10%), Positives = 46/212 (21%), Gaps = 6/212 (2%)
Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD---FPFAGVARKSLLMSAFVQYSAG 108
D + K + + KA EY+ + R+ A A
Sbjct: 480 ADRYNPAALTNKGNIDFINGEYEKAAEYYKEALRNDSSCTEALYNLGLTYKRLNRLEEAL 539
Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
Q Y + + + L + + +
Sbjct: 540 DCFHKLHAILRNSAQVLSQIAALYEMLEDPNQAIEWLMQLISVVPTDAHTLAKLGELYDN 599
Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
+ + +G YY+ AI F+ +
Sbjct: 600 EGDKSQAFQYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAIQYFERASLIQPTQVKWQ- 658
Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQG 260
+ Y +A + I +++P
Sbjct: 659 --LMVASCYRRSGNYQKALDTYKEIHKKFPDN 688
>gi|307718424|ref|YP_003873956.1| cyclic nucleotide-binding protein [Spirochaeta thermophila DSM
6192]
gi|306532149|gb|ADN01683.1| cyclic nucleotide-binding protein [Spirochaeta thermophila DSM
6192]
Length = 325
Score = 40.2 bits (91), Expect = 0.34, Method: Composition-based stats.
Identities = 26/221 (11%), Positives = 57/221 (25%), Gaps = 24/221 (10%)
Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
+V + ++ ++++Q FS+A + +P + A +
Sbjct: 122 EEVNPEEGLFSICKYYIEKQQFSQAAYALGRYLAYYPDGVHVEEV---------KAALTR 172
Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
A+ L + + Q + L +RI E
Sbjct: 173 VQAAQARGGTGALSIPSPEPRKPSLSSAEKDFYEAESLFGQERYEEALASFTRIAEGSDQ 232
Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231
+ A F +A + I + ++SDA EA+
Sbjct: 233 EDVRRRALFESGRCLMAMARYD--------------EVIQHYSRFARDFSDAPETSEALF 278
Query: 232 RLVEAYVALALMDEA-REVVSLIQERYPQGYWARYVETLVK 271
+ AY A ++ + ++
Sbjct: 279 LIARAYEEKGDGARAGALYRKVLSLPGVSSEVVKKARKALR 319
>gi|229032624|ref|ZP_04188588.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
cereus AH1271]
gi|228728709|gb|EEL79721.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
cereus AH1271]
Length = 273
Score = 40.2 bits (91), Expect = 0.34, Method: Composition-based stats.
Identities = 20/205 (9%), Positives = 46/205 (22%), Gaps = 3/205 (1%)
Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
+Q+ K LT S ++ L + + L + EKA L+++
Sbjct: 1 MFQMKKLLLTALISTSIFGLAACGGKDKDEKKLVVGASNVPHAVILEKAKPLLEKKGIEL 60
Query: 76 AYEYFNQCSRDFP---FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132
+ F + +++ + + + + + Y
Sbjct: 61 EIKKFQDYVLPNKSLADKDLDANYFQHIPYLEKEMKDKKYDFEIAGKIHLEPIGVYSQKY 120
Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
A +I L + I++ V + L K
Sbjct: 121 KSLKELPDGATIIMSNSVTDHGRGLAILQKEGILKIKDGVDPVSATPKDIADNPKHLKFK 180
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVL 217
+
Sbjct: 181 TDIEPGLLPQVYNNKEGDAVLINSN 205
>gi|197122379|ref|YP_002134330.1| lytic transglycosylase catalytic [Anaeromyxobacter sp. K]
gi|196172228|gb|ACG73201.1| Lytic transglycosylase catalytic [Anaeromyxobacter sp. K]
Length = 750
Score = 40.2 bits (91), Expect = 0.34, Method: Composition-based stats.
Identities = 8/58 (13%), Positives = 24/58 (41%)
Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
++ + +++ A++A+ + EARE ++ + +P G + +
Sbjct: 330 YRQLARDFAGHAFADDALFFAADLLARAGKSQEAREALAALVRDHPGGDYREEARFRL 387
>gi|220917161|ref|YP_002492465.1| Lytic transglycosylase catalytic [Anaeromyxobacter dehalogenans
2CP-1]
gi|219955015|gb|ACL65399.1| Lytic transglycosylase catalytic [Anaeromyxobacter dehalogenans
2CP-1]
Length = 750
Score = 40.2 bits (91), Expect = 0.34, Method: Composition-based stats.
Identities = 8/58 (13%), Positives = 24/58 (41%)
Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
++ + +++ A++A+ + EARE ++ + +P G + +
Sbjct: 330 YRQLARDFAGHAFADDALFFAADLLARAGKSQEAREALAALVRDHPGGDYREEARFRL 387
>gi|332221021|ref|XP_003259656.1| PREDICTED: transmembrane and TPR repeat-containing protein 2
[Nomascus leucogenys]
Length = 836
Score = 40.2 bits (91), Expect = 0.35, Method: Composition-based stats.
Identities = 16/226 (7%), Positives = 47/226 (20%), Gaps = 10/226 (4%)
Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
++ +Y L+ ++ ++ +A + + + P +
Sbjct: 587 CSEIPDENLKDPHAHKSSVTSCLYNLGKLYHEQGHYEEALSVYKEAIQKMPRQFAPQSLY 646
Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL------VGMSYAQMIRDVPYD 151
M K +A E + + Y ++
Sbjct: 647 NMMGEAYMRLSKLPEAEHWYMESLRSKTDHIPAHLTYGKLLALTGRKSEAEKLFLKAIEL 706
Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
+ + + + + AA
Sbjct: 707 DPTKGNCYMHYGQFLLEEARLIEAAEMAKKAAELDSTEFDVVFNAAHMLRQASLNEAAEK 766
Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR-EVVSLIQER 256
+ L + A+ L + +A + +Q +
Sbjct: 767 YYDLAARLRPNYPA---ALMNLGAILHLNGRLQKAEANYLRALQLK 809
>gi|317062422|ref|ZP_07926907.1| conserved hypothetical protein [Fusobacterium ulcerans ATCC 49185]
gi|313688098|gb|EFS24933.1| conserved hypothetical protein [Fusobacterium ulcerans ATCC 49185]
Length = 411
Score = 40.2 bits (91), Expect = 0.35, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 31/78 (39%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+G+ L+ AI ++ L + E + AY L +E+R +
Sbjct: 330 YFYMGQSNLQLDNGQKAIENYKKALDLEKSDDKKAEIYYNMGIAYDKLGNKEESRNYFTF 389
Query: 253 IQERYPQGYWARYVETLV 270
++++YP+ W+ +
Sbjct: 390 VRQKYPKSSWSTKSSIYL 407
>gi|318606743|emb|CBY28241.1| type IV pilus biogenesis protein PilF [Yersinia enterocolitica
subsp. palearctica Y11]
Length = 249
Score = 40.2 bits (91), Expect = 0.35, Method: Composition-based stats.
Identities = 33/252 (13%), Positives = 69/252 (27%), Gaps = 17/252 (6%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
K + L G S V + R + + +L + + + A +
Sbjct: 1 MKLTRLWRVCLIATVLAGCSGSSPEKVSQSAAGQTRL-----QLGLEYLAQGDLTAARQN 55
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
+ P ++ L AF + G+ A ++ + P + V Y
Sbjct: 56 LEKAVAADPQD---YRAQLGMAFYEQRIGENDAAEQRYQQAMKLAPGNGTVLNNYGAFLC 112
Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN------QLAAKE 193
S Q + A ++ + N+ Y R + +
Sbjct: 113 SLGQYVPAQQQFSAAVLS--PDYGQVADSLENAGYCFLRANQNDQARVLLSRALKYDPDK 170
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDA-EHAEEAMARLVEAYVALALMDEAREVVSL 252
E +R + QL+L Y + E++ + D +
Sbjct: 171 GEPLLAEAQRHFGEGNRAQAQLLLDVYQHILPASAESLWLQIRFAALAGRQDSVQRYGKQ 230
Query: 253 IQERYPQGYWAR 264
+ +PQ +
Sbjct: 231 LARSFPQSKQYQ 242
>gi|22749211|ref|NP_689801.1| transmembrane and TPR repeat-containing protein 2 [Homo sapiens]
gi|74759843|sp|Q8N394|TMTC2_HUMAN RecName: Full=Transmembrane and TPR repeat-containing protein 2
gi|21740314|emb|CAD39165.1| hypothetical protein [Homo sapiens]
gi|62739786|gb|AAH93852.1| Transmembrane and tetratricopeptide repeat containing 2 [Homo
sapiens]
gi|62740007|gb|AAH93854.1| Transmembrane and tetratricopeptide repeat containing 2 [Homo
sapiens]
gi|117645106|emb|CAL38019.1| hypothetical protein [synthetic construct]
gi|119617790|gb|EAW97384.1| transmembrane and tetratricopeptide repeat containing 2, isoform
CRA_a [Homo sapiens]
gi|189054853|dbj|BAG37694.1| unnamed protein product [Homo sapiens]
gi|208965636|dbj|BAG72832.1| transmembrane and tetratricopeptide repeat containing 2 [synthetic
construct]
Length = 836
Score = 40.2 bits (91), Expect = 0.35, Method: Composition-based stats.
Identities = 16/226 (7%), Positives = 47/226 (20%), Gaps = 10/226 (4%)
Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
++ +Y L+ ++ ++ +A + + + P +
Sbjct: 587 CSEIPDENLKDPHAHKSSVTSCLYNLGKLYHEQGHYEEALSVYKEAIQKMPRQFAPQSLY 646
Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL------VGMSYAQMIRDVPYD 151
M K +A E + + Y ++
Sbjct: 647 NMMGEAYMRLSKLPEAEHWYMESLRSKTDHIPAHLTYGKLLALTGRKSEAEKLFLKAIEL 706
Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
+ + + + + AA
Sbjct: 707 DPTKGNCYMHYGQFLLEEARLIEAAEMAKKAAELDSTEFDVVFNAAHMLRQASLNEAAEK 766
Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR-EVVSLIQER 256
+ L + A+ L + +A + +Q +
Sbjct: 767 YYDLAARLRPNYPA---ALMNLGAILHLNGRLQKAEANYLRALQLK 809
>gi|116625149|ref|YP_827305.1| TPR repeat-containing protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116228311|gb|ABJ87020.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter
usitatus Ellin6076]
Length = 344
Score = 40.2 bits (91), Expect = 0.35, Method: Composition-based stats.
Identities = 22/195 (11%), Positives = 54/195 (27%)
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
Y+ A +L + +A F P + L +
Sbjct: 128 YKLAQSYLWSGQYQEAIGEFRFLLTKDPDSAPVHMLLGDVLDAANQTEPATAEFEAAVKA 187
Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
PE+ Y +A+ R+ + +Q M+ + + ++ K A
Sbjct: 188 SPAEPEAHFSLGYLYWKQKRFAEACREFQAELAQHPKHVQAMTYLGDAEMHAGDEKAAEE 247
Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
++ + + + + + + + +A RL +
Sbjct: 248 HLRRALSLDSNTRLAHLDLGILLAGKDDSAAAARFLSEAIRIDPSKPDAHYRLGRLLRSQ 307
Query: 241 ALMDEAREVVSLIQE 255
EA + + ++E
Sbjct: 308 GRESEAEKEFAKVKE 322
>gi|149202854|ref|ZP_01879825.1| hypothetical protein RTM1035_18966 [Roseovarius sp. TM1035]
gi|149143400|gb|EDM31436.1| hypothetical protein RTM1035_18966 [Roseovarius sp. TM1035]
Length = 280
Score = 40.2 bits (91), Expect = 0.35, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 21/54 (38%)
Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
+ A + + D A EA+ RL A L EA + ++ RYP
Sbjct: 209 QQSEAARAYLDSFSAAPDGSEAPEALFRLGRALGRLGQTQEACVTLGQVEARYP 262
>gi|315638115|ref|ZP_07893298.1| competence lipoprotein ComL [Campylobacter upsaliensis JV21]
gi|315481795|gb|EFU72416.1| competence lipoprotein ComL [Campylobacter upsaliensis JV21]
Length = 215
Score = 40.2 bits (91), Expect = 0.36, Method: Composition-based stats.
Identities = 32/212 (15%), Positives = 73/212 (34%), Gaps = 12/212 (5%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K L + I F ++ ++Y + Y + + L++++ KA
Sbjct: 1 MKKNLLILSLII--TFFTACSTKNKDELY------NLSPSQWYAQIIKDLQDKDLEKADT 52
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+++ + + + +L++ A +YQ A +EY ++ SKNVDY YL
Sbjct: 53 HYSGMASEHIADPLLEPTLIILAQAHMDEEEYQLAEFYLDEYNKKFGNSKNVDYTRYLKI 112
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
+ + +Q Q + ++ Y N+ Y V + +
Sbjct: 113 KAKFEAFAVPNRNQALMLQSQQEIDNFLKEYPNTQYKP----LVQTMLTKFNIAVFYLDS 168
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
+++ +E E ++
Sbjct: 169 TIADLYNRTNRQQSYEIYQEKLQQSEFFERSI 200
>gi|289548835|ref|YP_003473823.1| hypothetical protein Thal_1064 [Thermocrinis albus DSM 14484]
gi|289182452|gb|ADC89696.1| Tetratricopeptide TPR_2 repeat protein [Thermocrinis albus DSM
14484]
Length = 538
Score = 40.2 bits (91), Expect = 0.36, Method: Composition-based stats.
Identities = 32/209 (15%), Positives = 71/209 (33%), Gaps = 7/209 (3%)
Query: 67 FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126
+ ++ + +A + + + +P A +L V+ K A G + P+
Sbjct: 54 AILQKKYDRALQLALEFRKQYPKLPEAYLTLHSVYSVRGEQHKAMSALEEGYRVVPDSPQ 113
Query: 127 SK---NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
+Y+ +++ + L ++R+ +
Sbjct: 114 ILLLLADEYMRRSQYDKATPLLQRLSELNPQNPLPYYLLARLYMAQGDQKKAIEYLEKSL 173
Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243
+ A + +G Y RGE A ++ +L + A+ RL Y +
Sbjct: 174 RVKPTFEAGFITLGGLYESRGELSKAETLYKSILEKDPNNRV---ALERLASLYASSGRW 230
Query: 244 DEAREVVSLIQERYPQGYW-ARYVETLVK 271
+EA+E + + YP + +Y L+K
Sbjct: 231 EEAKETYRKLIDLYPDSGYQYQYALVLIK 259
>gi|147781154|emb|CAN67377.1| hypothetical protein VITISV_017914 [Vitis vinifera]
Length = 788
Score = 40.2 bits (91), Expect = 0.36, Method: Composition-based stats.
Identities = 27/197 (13%), Positives = 60/197 (30%), Gaps = 9/197 (4%)
Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
+ K F KA + F + + P A +L + A ++ +
Sbjct: 204 GLCCYKLGQFEKARKAFQRVLQLDPENVEALVALGIMDLHTNDASGIRKGMEKMQRAFEI 263
Query: 124 YPESKNV-----DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
YP ++ ++ + + + + + R +S
Sbjct: 264 YPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEK 323
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD----AEHAEEAMARLV 234
+ + + K + Y G+ + F+ L+N+ EA+ L
Sbjct: 324 AGLYYMASVKESNKPHDFVLPYYGLGQVQLKLGDFRSSLSNFEKVLEVYPENCEALKALG 383
Query: 235 EAYVALALMDEAREVVS 251
YV L ++A+E +
Sbjct: 384 HIYVQLGQTEKAQEYLR 400
>gi|126662914|ref|ZP_01733913.1| hypothetical protein FBBAL38_06145 [Flavobacteria bacterium BAL38]
gi|126626293|gb|EAZ96982.1| hypothetical protein FBBAL38_06145 [Flavobacteria bacterium BAL38]
Length = 593
Score = 40.2 bits (91), Expect = 0.36, Method: Composition-based stats.
Identities = 28/208 (13%), Positives = 72/208 (34%), Gaps = 3/208 (1%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
E A + + ++ F++A Y+ Q + +A ++ L A + + +
Sbjct: 377 ELADIMVYDEKFNQAILYYAQVEENLKNDVLAHEASLKLAKANFYKKDFDWTLQQVKILK 436
Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
D + + + + +A + + ++ ++
Sbjct: 437 QSPSLLIANDAIELFLLIQDNSAEDSLRVALQAYAKADLQLYQ--KKNEDALQSFLTILE 494
Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA-L 240
G + ++I Y ++ EY A+ +Q +L N+ D + +EA+ E Y L
Sbjct: 495 KHKGESIEDETLLKIADIYFRKKEYQKALNYYQNILDNHKDGIYIDEALFFSAEIYRKYL 554
Query: 241 ALMDEAREVVSLIQERYPQGYWARYVET 268
++A+ + + +P +
Sbjct: 555 LDNEKAKPLYEKMVLEHPDSLYYTESRK 582
>gi|126339390|ref|XP_001364300.1| PREDICTED: similar to transmembrane and tetratricopeptide repeat
containing 2 [Monodelphis domestica]
Length = 836
Score = 40.2 bits (91), Expect = 0.36, Method: Composition-based stats.
Identities = 16/226 (7%), Positives = 46/226 (20%), Gaps = 10/226 (4%)
Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
++ +Y L+ ++ + +A + + + P +
Sbjct: 587 CSEIPDENLKDPHAHKSSVTSCLYNLGKLYHEQGRYEEALTVYKEAIQKMPRQFAPQSLY 646
Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL------VGMSYAQMIRDVPYD 151
M K +A E + + Y +
Sbjct: 647 NMMGEAYLRLSKLPEAEHWYVESLRSKTDHIPAHLTYGKLLALTGRKNEAEKFFLKAIQL 706
Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
+ + + + + AA
Sbjct: 707 DPTRGNCYMHYGQFLLEEARVMEAAEMAQKAAELDSDEFDVVFNAAHMLRQASLNEAAEK 766
Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR-EVVSLIQER 256
++L + A+ L + +A + +Q +
Sbjct: 767 YYELAARLRPNYPA---ALMNLGAILHLNGRLLKAEANYLQALQLK 809
>gi|85858278|ref|YP_460480.1| TPR repeat-containing protein [Syntrophus aciditrophicus SB]
gi|85721369|gb|ABC76312.1| TPR repeat-containing protein [Syntrophus aciditrophicus SB]
Length = 649
Score = 40.2 bits (91), Expect = 0.36, Method: Composition-based stats.
Identities = 28/266 (10%), Positives = 66/266 (24%), Gaps = 23/266 (8%)
Query: 19 LYK-FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQ-----N 72
+ K F+L + F I V + + + Y++ + KA L +
Sbjct: 15 MRKLFSLGMAFLILASLAVACSGPEEKKMKFFNKGKSLYEKGEFVKAGLEFRNAIQIDPK 74
Query: 73 FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132
++ A+ A S + + + Q ++
Sbjct: 75 YADAHYMLGMVELRKGNLKNAYGSFSKAVELNPNLTDAHIQLGNLYLAARQPDKALKKAE 134
Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
+ + A K ++ + + + Q +
Sbjct: 135 TVLQLSPGNEDALLLKAAALIALKDSADALAILRDMRQRGVKRPELFLLLASSHLQNNSI 194
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA---------------MARLVEA- 236
+ + A+ + + Y+ + +EA RL A
Sbjct: 195 KEAQDALNTGIADNPKAVILYLTLADLYTRDKKIDEAAATLQKVIALEPKNSRYRLTLAG 254
Query: 237 -YVALALMDEAREVVSLIQERYPQGY 261
Y + D+A + + P
Sbjct: 255 LYWHVGQNDKAVATLQEVVAAEPANE 280
>gi|85859714|ref|YP_461916.1| putative cytoplasmic protein [Syntrophus aciditrophicus SB]
gi|85722805|gb|ABC77748.1| hypothetical cytosolic protein [Syntrophus aciditrophicus SB]
Length = 152
Score = 40.2 bits (91), Expect = 0.36, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 32/79 (40%), Gaps = 5/79 (6%)
Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR--EVVSLIQ 254
G+ + + + AI F+ + Y ++ A EA+ + + D A ++ ++
Sbjct: 74 GKVFFGQPDRPKAISYFKQITMAYPESFQAPEAVYLKGVSQY-IEDHDVANLFDIYECLK 132
Query: 255 ERYPQGYWARYV--ETLVK 271
RYP W L+K
Sbjct: 133 SRYPDSEWLMRADPYRLLK 151
>gi|213969193|ref|ZP_03397332.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
gi|213926191|gb|EEB59747.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
Length = 203
Score = 40.2 bits (91), Expect = 0.36, Method: Composition-based stats.
Identities = 16/111 (14%), Positives = 36/111 (32%), Gaps = 1/111 (0%)
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI-GRYYLKRGEYVAAIPRFQLVLANY 220
I + + F + A G L +G+ A F V Y
Sbjct: 91 FDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGDLQGAGQAFAKVSQQY 150
Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+++ +L + L D+ + ++ + +YP A+ + ++
Sbjct: 151 PKHAKVPDSLYKLADVERRLGHTDKVKGILQQVVAQYPGTSAAQLAQRDLQ 201
Score = 38.2 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 32/83 (38%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
D ++ YE A +K ++F KA + F R +P + A + V + G
Sbjct: 76 EPPDPAKEKLYYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGD 135
Query: 110 YQQAASLGEEYITQYPESKNVDY 132
Q A + QYP+ V
Sbjct: 136 LQGAGQAFAKVSQQYPKHAKVPD 158
Score = 37.9 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 14/67 (20%), Positives = 28/67 (41%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
E +K ++ A F L Y ++ +A A L E +A + A + +
Sbjct: 86 YYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGDLQGAGQAFAK 145
Query: 253 IQERYPQ 259
+ ++YP+
Sbjct: 146 VSQQYPK 152
>gi|320536427|ref|ZP_08036464.1| tetratricopeptide repeat protein [Treponema phagedenis F0421]
gi|320146737|gb|EFW38316.1| tetratricopeptide repeat protein [Treponema phagedenis F0421]
Length = 865
Score = 40.2 bits (91), Expect = 0.36, Method: Composition-based stats.
Identities = 23/213 (10%), Positives = 56/213 (26%), Gaps = 7/213 (3%)
Query: 47 YLDSVTDVRYQREVYEK-AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
+ + + + E+Y L+L+ + F KA + + +L
Sbjct: 33 ESNKNLEKQDEYEIYSALGQLYLRSEQFQKALSVYKKLQMQNAQDADVLNNLGTVYRRLG 92
Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM---IRDVPYDQRATKLMLQYM 162
+ + Y G Y + + V L ++
Sbjct: 93 KLPESVAILKTALKLGKNRETVLYNLGNTYKEGEVYDRAADCFKQVLELNPNDVLAYNHL 152
Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
I + + + + + K+G+ AA+ + +
Sbjct: 153 GTIQALEKKTELAIETYYKGLLLDPNHPFLHFNLANIFYKQGKLTAALESYLEAVKTMPG 212
Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
EA + + Y+ + D A + +
Sbjct: 213 FI---EAQKNIADIYLKIGKTDLALHSYKTLIQ 242
>gi|118474870|ref|YP_892652.1| TPR repeat-containing protein [Campylobacter fetus subsp. fetus
82-40]
gi|261885574|ref|ZP_06009613.1| TPR repeat-containing protein [Campylobacter fetus subsp.
venerealis str. Azul-94]
gi|118414096|gb|ABK82516.1| TPR repeat-containing protein [Campylobacter fetus subsp. fetus
82-40]
Length = 293
Score = 40.2 bits (91), Expect = 0.36, Method: Composition-based stats.
Identities = 12/100 (12%), Positives = 32/100 (32%)
Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
A ++ +++ A +G Y AIP +Q + +
Sbjct: 190 YNNKEYLKASEAYAFLVKKKHKPAYSNFMLGEIEYTNKNYKDAIPYYQKSVELSQKGTYM 249
Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
+ + ++ + A + + +++ YP A+
Sbjct: 250 PKLLYHTAISFDKIGDTKNANKFYNALRQAYPDSKEAKAS 289
>gi|221119020|ref|XP_002163098.1| PREDICTED: similar to predicted protein [Hydra magnipapillata]
Length = 799
Score = 39.8 bits (90), Expect = 0.36, Method: Composition-based stats.
Identities = 26/227 (11%), Positives = 59/227 (25%), Gaps = 11/227 (4%)
Query: 19 LYKFALTIFFS-IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
+ K + F I +V + ++ L+ ++ E+Y A+ E N+ A
Sbjct: 4 IKKIICHLVFIHIIYLVIVNC---NIENLDLNYTSNKETYDELYTNALKAYNEDNYLLAT 60
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
Y + + + + + K+++ +L Y + +
Sbjct: 61 IYLERAI-----SDYHHANEVKAQCRIQCDLKFKKVQTLYSNYFNGELDYLHYFIKVKSC 115
Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
A+ L L Y G
Sbjct: 116 SELCAEKFLGRRQAVAGEILALFEKREPYNYIQYCYYKIGEIEKAANAAFTYLEVNPNHT 175
Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244
+ I + L + + H + + EA+ + M+
Sbjct: 176 LMQENIEILLKKIGKDNSTLRSQEELPHI--TLYKSAEAFYSSGNME 220
>gi|187251109|ref|YP_001875591.1| type II secretion system [rpteom [Elusimicrobium minutum Pei191]
gi|186971269|gb|ACC98254.1| Putatively involved in type II secretion system [Elusimicrobium
minutum Pei191]
Length = 563
Score = 39.8 bits (90), Expect = 0.36, Method: Composition-based stats.
Identities = 27/244 (11%), Positives = 54/244 (22%), Gaps = 16/244 (6%)
Query: 21 KFALTIFFSIAVCFLVGWE-------RQSSRDVYLDSVTDVRYQREVYE---KAVLFLKE 70
T F F V ++ Y SV D + + K F+
Sbjct: 1 MLKKTFTFIFLCLFCVCCFGQNLIGRKKELNPDYSKSVWDNVMETQSLNDVRKGFYFMSV 60
Query: 71 QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN- 129
+ A F + P L + + E + ++
Sbjct: 61 AKYEDAVTAFAKAVVKNPKEANYYLFLGRALYWSGKVDSAMAEFRTAMEINPKNGDAYQL 120
Query: 130 --VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
+ Y + + + +S +
Sbjct: 121 LGIGYGWKGDIRQAQKNFEKAERLMPNRPDVKMNLSSVYASQNKLELALDYIRMAVALSP 180
Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
+ ++G G +A F+ + Y E++M L Y +A
Sbjct: 181 KDPLLYHQLGLISEMLGRDSSAEEAFKTSIKLYPRY---EDSMLALAATYEKRNDDKDAL 237
Query: 248 EVVS 251
Sbjct: 238 SYYK 241
>gi|78357188|ref|YP_388637.1| TPR domain-containing protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78219593|gb|ABB38942.1| TPR domain protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 335
Score = 39.8 bits (90), Expect = 0.36, Method: Composition-based stats.
Identities = 17/123 (13%), Positives = 40/123 (32%), Gaps = 2/123 (1%)
Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
+ L Y + +A G + + +Y
Sbjct: 212 DPADMLYEQALASFKE--RNYQAAQRQWKEFATAFPAHAMVANAVFWQGECFYQMEDYAR 269
Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
A+ +Q V+ ++D+ AM + + + L + + I +++P A+ T
Sbjct: 270 AVLAYQDVVTKHADSSKYLPAMLKQGISLIRLGKTKAGKIRLEEIIKKHPGTPEAKRAAT 329
Query: 269 LVK 271
++K
Sbjct: 330 VLK 332
Score = 37.5 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 34/86 (39%)
Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
+ + +YE+A+ KE+N+ A + + + FP + ++
Sbjct: 202 NTTAQTAPKADPADMLYEQALASFKERNYQAAQRQWKEFATAFPAHAMVANAVFWQGECF 261
Query: 105 YSAGKYQQAASLGEEYITQYPESKNV 130
Y Y +A ++ +T++ +S
Sbjct: 262 YQMEDYARAVLAYQDVVTKHADSSKY 287
>gi|260060927|ref|YP_003194007.1| tetratricopeptide repeat domain-containing protein [Robiginitalea
biformata HTCC2501]
gi|88785059|gb|EAR16228.1| tetratricopeptide repeat domain protein [Robiginitalea biformata
HTCC2501]
Length = 594
Score = 39.8 bits (90), Expect = 0.36, Method: Composition-based stats.
Identities = 30/240 (12%), Positives = 72/240 (30%), Gaps = 11/240 (4%)
Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQN-------FSKAYEYFNQCSRDFPFAGV 92
+ R + + + E Y + + L + F++A F+Q + +
Sbjct: 350 SKPDRAIRILKNSLDLPLPE-YAEGYVKLSLGDILVFDQRFNEALILFSQIQKLLKNDVM 408
Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
+++ A + G + A + + + D + + +S +
Sbjct: 409 GQQARFKVAQTSFYKGDFDWALTQLKVLRNSTSQLIANDAMQLSLIISDNSLEDSTQTAL 468
Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
R + ++ + G + GR G+Y A+
Sbjct: 469 RKY--ARADLLAYQQKNAEALAALDEILTGHKGEKIEDEALLMHGRLLEAAGDYSGALLS 526
Query: 213 FQLVLANYSDAEHAEEAMARLVEAYV-ALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
++ ++ + A++A + E Y L +A E I R+ Y +
Sbjct: 527 YRKIVEFFGQDILADDAHFAMGELYRTRLEDPAKAMEHYREIIYRFQDSYHFPEARKQFR 586
>gi|317486159|ref|ZP_07945002.1| N-acetylmuramoyl-L-alanine amidase [Bilophila wadsworthia 3_1_6]
gi|316922586|gb|EFV43829.1| N-acetylmuramoyl-L-alanine amidase [Bilophila wadsworthia 3_1_6]
Length = 537
Score = 39.8 bits (90), Expect = 0.37, Method: Composition-based stats.
Identities = 15/113 (13%), Positives = 42/113 (37%), Gaps = 1/113 (0%)
Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
+ ++ E + V+ + + A + R + ++ R+ ++
Sbjct: 174 REPWEKLAETFLTVYRVEKKWKERSAALFRSAEALDHLARCASNAKDARRSVDRYLQLVR 233
Query: 219 NYSDAEHAEEAMARLVEAY-VALALMDEAREVVSLIQERYPQGYWARYVETLV 270
Y + A++++ R L A+E++ I ++YP A+ + +
Sbjct: 234 LYPKSSLADDSLYRAARLRGQILRDKAGAQELLQQILKKYPSSNTAKDASSYL 286
>gi|325109007|ref|YP_004270075.1| Tetratricopeptide TPR_1 repeat-containing protein [Planctomyces
brasiliensis DSM 5305]
gi|324969275|gb|ADY60053.1| Tetratricopeptide TPR_1 repeat-containing protein [Planctomyces
brasiliensis DSM 5305]
Length = 872
Score = 39.8 bits (90), Expect = 0.37, Method: Composition-based stats.
Identities = 15/99 (15%), Positives = 35/99 (35%)
Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231
+ Y+ A+ + Y + AI +++L +Y + EA
Sbjct: 526 NRYIDSNPLTGLPAAYVFKARLLMDLDPYSNQENLDQAIAVLEMLLRDYPKDQFIYEAQI 585
Query: 232 RLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
L + Y+ + ++A E+ + + P A + +
Sbjct: 586 LLGDIYLEMGENEQAIEIWRELLLKSPLTPEATEWQDAL 624
Score = 38.2 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 22/221 (9%), Positives = 51/221 (23%), Gaps = 12/221 (5%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFS----KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106
+Q ++ + +A + +
Sbjct: 615 PEATEWQDALFSLGRTLFLISDARPEILQAATTDEAAEKQAALNYERVDEAIQWLDEFVR 674
Query: 107 AGKYQQAASLGEEYITQYPESK-NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM--- 162
A + + + + + I +
Sbjct: 675 RRPQHPRAFEARWLLAKGLRFRIQKPADHIEHAETENTRIELNNEINSLAARAIAEFERL 734
Query: 163 -SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
+ + ++ + A + +GRY Y AI + +++
Sbjct: 735 GDDLAVLEQQDLLNQVTAQFLRDAYFEPAHIQYRLGRYDSTGDAYRKAIDLYSNAAFHFT 794
Query: 222 DAEHAEEAMARLVEAYVALALMDEAR---EVVSLIQERYPQ 259
+ A R+ E Y L EAR E +I ++ P
Sbjct: 795 GSPTVLIAYYRIAECYRELGAEAEARRQLEQARVILQQLPD 835
>gi|308271252|emb|CBX27861.1| hypothetical protein N47_C19190 [uncultured Desulfobacterium sp.]
Length = 571
Score = 39.8 bits (90), Expect = 0.37, Method: Composition-based stats.
Identities = 15/117 (12%), Positives = 32/117 (27%), Gaps = 7/117 (5%)
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
+ + G R ++ I +FQ V
Sbjct: 4 FFSFILLFQPCLSSAGDAKTGYFRAEGAYKSLRNNPARQKYRQFWLECIDKFQKVYREDP 63
Query: 222 DAEHAEEAMARLVEAYVAL-------ALMDEAREVVSLIQERYPQGYWARYVETLVK 271
A ++ Y+ L + +EA ++ I +R+P +A ++
Sbjct: 64 SGPWASASLYMAGNLYIELHKRSLKSSDKNEAIDIFERITKRFPDSKYAARAREEIE 120
>gi|282896805|ref|ZP_06304811.1| Lytic transglycosylase, catalytic [Raphidiopsis brookii D9]
gi|281198214|gb|EFA73104.1| Lytic transglycosylase, catalytic [Raphidiopsis brookii D9]
Length = 726
Score = 39.8 bits (90), Expect = 0.37, Method: Composition-based stats.
Identities = 15/105 (14%), Positives = 33/105 (31%)
Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
++ ++ + + K +YV A Q + +
Sbjct: 344 LKDNQSANQTWKLLLSKYSSSDAATEYRWQTALTKAKNRDYVGAWEWAQPIPTQNPASIL 403
Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
A A + + L +EAR+ + +PQ Y+A ++
Sbjct: 404 APRASFWVGKWASLLGKNEEARKSYEYVLANFPQSYYAWRSARIL 448
>gi|261820571|ref|YP_003258677.1| type IV pilus biogenesis/stability protein PilW [Pectobacterium
wasabiae WPP163]
gi|261604584|gb|ACX87070.1| type IV pilus biogenesis/stability protein PilW [Pectobacterium
wasabiae WPP163]
Length = 261
Score = 39.8 bits (90), Expect = 0.37, Method: Composition-based stats.
Identities = 24/251 (9%), Positives = 65/251 (25%), Gaps = 18/251 (7%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
+ + A+ LVG VT+ + + + +L N A + F
Sbjct: 15 RALSLLSNLFAILLLVGC------VNSPHEVTNPAVAQTRLQLGLAYLASNNLDSARQNF 68
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
+ P + + + +Q +N +
Sbjct: 69 EKAVAVAPQDYRTQLGMALYEQRIGENRLAEQRYQQVLNMA-----PENGSVMNNYGAFL 123
Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK------GARFYVTVGRNQLAAKEV 194
+ Q + L S++ + N+ Y + + K+
Sbjct: 124 CSLGQYVAAQRQFSAAAQLPDYSQVADALENAGYCFFNAGRVDDARNLLSRALKYDPKKG 183
Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDA-EHAEEAMARLVEAYVALALMDEAREVVSLI 253
+ + +L++ Y + + E++ + + +++
Sbjct: 184 VALLAEANQQFSAGKSEQVRLLIEIYQHSLPASAESLWLQIRFAALAGHDGDKERYGNVL 243
Query: 254 QERYPQGYWAR 264
+PQ +
Sbjct: 244 ARSFPQSKQYQ 254
>gi|196228082|ref|ZP_03126949.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428]
gi|196227485|gb|EDY21988.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428]
Length = 1038
Score = 39.8 bits (90), Expect = 0.37, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 25/79 (31%)
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
A + L + AIP + Y +++ A+ L +A EA
Sbjct: 539 QAEQAHYQVGQMLSETDAKGAIPELESFFKKYPKSQYTPAALFALGKAQAGTNQASEALN 598
Query: 249 VVSLIQERYPQGYWARYVE 267
+ +P+ A +
Sbjct: 599 TFKKVATDFPKSDPAPFSY 617
Score = 39.4 bits (89), Expect = 0.54, Method: Composition-based stats.
Identities = 33/244 (13%), Positives = 70/244 (28%), Gaps = 43/244 (17%)
Query: 27 FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86
F A+ L + + +++ +A + ++ A F + +
Sbjct: 7 FAPTAIVCLASSILGTGPAMAQAPAAPQTLDQQMMAEAQQLFDQGKYADAAAKFEELVKK 66
Query: 87 FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146
FP ++ + + Y AG+Y QA + ++ +
Sbjct: 67 FPQVPTVPQANFSAGYSFYLAGEYDQAIADFKKVLDAKNLPAEYA--------------- 111
Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
+L L ++ + + ++
Sbjct: 112 ------PTAELALSMTAQALSAKAAKMAPED----------------------QRRKTTL 143
Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
A+ F LA Y ++E AE A A L+ DEA + ++ Q +
Sbjct: 144 DDAVKGFDAFLAKYPNSEEAESATYGKSLALFQLSRYDEAITALKANLAKFIQSPTVQDS 203
Query: 267 ETLV 270
E L+
Sbjct: 204 EYLL 207
Score = 35.2 bits (78), Expect = 9.5, Method: Composition-based stats.
Identities = 17/259 (6%), Positives = 53/259 (20%), Gaps = 34/259 (13%)
Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
+D + + ++ K ++A + F + F A ++ +
Sbjct: 491 KDTLSKNPPKDLAVDANFYLGTIYAKTGKVAEAIKQFKEVRDKFSGTPQAEQAHYQVGQM 550
Query: 104 QYSAGKYQQAASLGEEYITQYPESKN--------VDYVYYLVGMSYAQMIRDVPYDQRAT 155
L + + V D +
Sbjct: 551 LSETDAKGAIPELESFFKKYPKSQYTPAALFALGKAQAGTNQASEALNTFKKVATDFPKS 610
Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA-------KEVEIGRYYLKRGEYVA 208
+ + +K+ +
Sbjct: 611 DPAPFSYFERASILQKEQKYDDCVTTMKEFIKNYPNSPALFQAYDFIAQIQTMKKDGGMD 670
Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVE----------AYVALAL---------MDEAREV 249
A+ ++ +A +A+ +L Y+A+ ++++ +
Sbjct: 671 AVATYEEFVAKKPKDPSTPDALLKLAALWKGYTDSQGTYLAIEEAKRTEWKKGIEKSLQA 730
Query: 250 VSLIQERYPQGYWARYVET 268
+ +P
Sbjct: 731 AEKLLTEFPDSPQVAKALN 749
>gi|90022602|ref|YP_528429.1| cellulose binding, type IV [Saccharophagus degradans 2-40]
gi|89952202|gb|ABD82217.1| Tetratricopeptide TPR_2 [Saccharophagus degradans 2-40]
Length = 952
Score = 39.8 bits (90), Expect = 0.37, Method: Composition-based stats.
Identities = 12/115 (10%), Positives = 46/115 (40%), Gaps = 2/115 (1%)
Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
+++ +++ + + +++ + + + + + K+
Sbjct: 38 QEQEIEFEKLDHAQVREEYKELLDLFEDKQLKEQIERRIADVYMMESVHTQHQD--VEKK 95
Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
Y+ AI ++ +L Y ++ E + +L +AY ++A +++ + ++P
Sbjct: 96 SYYLEAIKEYEKILEKYPNSPDNAEVLYQLAKAYDMEGEQEKALRMLTELTSKHP 150
>gi|109121105|ref|XP_001086487.1| PREDICTED: dnaJ homolog subfamily C member 3 isoform 2 [Macaca
mulatta]
Length = 504
Score = 39.8 bits (90), Expect = 0.37, Method: Composition-based stats.
Identities = 22/258 (8%), Positives = 67/258 (25%), Gaps = 20/258 (7%)
Query: 34 FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93
L ++ + + + +A+ + +++ A + ++ +
Sbjct: 131 VLKSNPSENEEKEAQSQLIKSDEMQRLRSQALDAFESGDYAAAIAFLDKILEVCVWDAEL 190
Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153
R+ + K + E+ Y + + +V +
Sbjct: 191 RELRAECFIKEGEPRKAISDLKAASKLKNDNTEAFYKISTLYYQLGDHELSLSEVRECLK 250
Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK----------- 202
+ + + + + ++ A + GR A + E
Sbjct: 251 LDQDHKRCFAHYKQVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPSIAEYTIRSKE 310
Query: 203 -----RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA-REVVSLIQER 256
+ + ++ A+ EAY+ + DEA ++ + +
Sbjct: 311 RICHCFSKDEKPVEAIRVCSEVLQMEPDNVNALKDRAEAYLIEEMYDEAIQDYETAQEHN 370
Query: 257 YPQGYWA---RYVETLVK 271
+ L+K
Sbjct: 371 ENDQQIREGLEKAQRLLK 388
>gi|289674680|ref|ZP_06495570.1| tol-pal system protein YbgF [Pseudomonas syringae pv. syringae FF5]
gi|330936709|gb|EGH40897.1| tol-pal system protein YbgF [Pseudomonas syringae pv. pisi str.
1704B]
gi|330975319|gb|EGH75385.1| tol-pal system protein YbgF [Pseudomonas syringae pv. aptata str.
DSM 50252]
Length = 208
Score = 39.8 bits (90), Expect = 0.37, Method: Composition-based stats.
Identities = 16/111 (14%), Positives = 36/111 (32%), Gaps = 1/111 (0%)
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI-GRYYLKRGEYVAAIPRFQLVLANY 220
I + + F + A G L +G+ A F V Y
Sbjct: 96 FDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGDLQGAGQAFAKVSQQY 155
Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+++ +L + L D+ + ++ + +YP A+ + ++
Sbjct: 156 PKHAKVPDSLYKLADVERRLGHTDKVKGILQQVVAQYPGTSAAQLAQRDLQ 206
Score = 38.2 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 32/83 (38%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
D ++ YE A +K ++F KA + F R +P + A + V + G
Sbjct: 81 EPPDPAKEKLYYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGD 140
Query: 110 YQQAASLGEEYITQYPESKNVDY 132
Q A + QYP+ V
Sbjct: 141 LQGAGQAFAKVSQQYPKHAKVPD 163
Score = 37.9 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 14/67 (20%), Positives = 28/67 (41%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
E +K ++ A F L Y ++ +A A L E +A + A + +
Sbjct: 91 YYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGDLQGAGQAFAK 150
Query: 253 IQERYPQ 259
+ ++YP+
Sbjct: 151 VSQQYPK 157
>gi|228930008|ref|ZP_04093019.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
thuringiensis serovar pondicheriensis BGSC 4BA1]
gi|228829688|gb|EEM75314.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
thuringiensis serovar pondicheriensis BGSC 4BA1]
Length = 273
Score = 39.8 bits (90), Expect = 0.37, Method: Composition-based stats.
Identities = 13/73 (17%), Positives = 25/73 (34%)
Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
+Q+ K LT S ++ L + + + L E+ EKA L+++
Sbjct: 1 MFQMKKLLLTALISTSIFGLAACGGKDNDEKKLVVGASNVPHAEILEKAKPLLEKKGIEL 60
Query: 76 AYEYFNQCSRDFP 88
+ F
Sbjct: 61 EVKKFQDYVLPNK 73
>gi|315185556|gb|EFU19325.1| putative transcriptional regulator, Crp/Fnr family [Spirochaeta
thermophila DSM 6578]
Length = 325
Score = 39.8 bits (90), Expect = 0.38, Method: Composition-based stats.
Identities = 26/221 (11%), Positives = 56/221 (25%), Gaps = 24/221 (10%)
Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
+V + ++ ++++Q FS+A + +P + A +
Sbjct: 122 EEVNPEEGLFSICKYYIEKQQFSQAAYALGRYLAYYPDGVHVEEV---------KAALAR 172
Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
A+ L + + Q + L RI E
Sbjct: 173 VQAAQARGGTGALSVPSPEPRKPSLSSAEKDFYEAESLFGQERYEEALASFMRIAEGSDQ 232
Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231
+ A F +A + I + ++SDA EA+
Sbjct: 233 EDVRRRALFESGRCLMAMARYD--------------EVIQHYSRFARDFSDAPETSEALF 278
Query: 232 RLVEAYVALALMDEA-REVVSLIQERYPQGYWARYVETLVK 271
+ AY A ++ + ++
Sbjct: 279 LIARAYEEKGDGARAGALYRKVLSLPGVSSEVVKKARKALR 319
>gi|262197143|ref|YP_003268352.1| hypothetical protein Hoch_3960 [Haliangium ochraceum DSM 14365]
gi|262080490|gb|ACY16459.1| hypothetical protein Hoch_3960 [Haliangium ochraceum DSM 14365]
Length = 689
Score = 39.8 bits (90), Expect = 0.38, Method: Composition-based stats.
Identities = 18/192 (9%), Positives = 53/192 (27%), Gaps = 6/192 (3%)
Query: 67 FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126
L+ ++++ A + ++ V +S A + + +
Sbjct: 156 ALETRDYAGALTRLERAAQAAADNAVDSESQTPPAEAADARRYLGAHVEYVQGRLDTAEG 215
Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
+ S + + Q + + + + V
Sbjct: 216 LLAEIGERSWLHTSAVYLRGVIRVRQGRFREAAGALCEVAQL------PDDDPMAFVVDG 269
Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
K++ E+ F +D++ EA+ + +D A
Sbjct: 270 RYYTVKDLARLGLGRIAHEHGEYDDAFYHYFQIPNDSDRLPEALFEAAWSMYQKRDLDAA 329
Query: 247 REVVSLIQERYP 258
R++++ + + +P
Sbjct: 330 RDLLAELFQNFP 341
>gi|196232460|ref|ZP_03131313.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
Ellin428]
gi|196223532|gb|EDY18049.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
Ellin428]
Length = 792
Score = 39.8 bits (90), Expect = 0.38, Method: Composition-based stats.
Identities = 19/195 (9%), Positives = 48/195 (24%), Gaps = 6/195 (3%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
V ++ +A + + P +L + + A +
Sbjct: 178 NLGVALSEQGKSDEAIAAYGRALELKPDGNAVHANLGNALRASGRYAEAVVAYRRSLQSS 237
Query: 122 TQYPES---KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
+ V ++ R + ++ +++R
Sbjct: 238 PARLDICQGLGEALVLLGRFDEAGEVFRLIVRCNPDDPEAWASLANVLQRGEKLDDAIAC 297
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
+ + + ++ A VL + EA+ RL E Y
Sbjct: 298 YRQALRLDPEEPFRLCRLAALLQRQRRLDDAAAALLQVLELQPNQT---EALYRLAEIYK 354
Query: 239 ALALMDEAREVVSLI 253
+ A E++ +
Sbjct: 355 DQGRSELALELMRRL 369
>gi|167586271|ref|ZP_02378659.1| tol-pal system protein YbgF [Burkholderia ubonensis Bu]
Length = 249
Score = 39.8 bits (90), Expect = 0.38, Method: Composition-based stats.
Identities = 17/111 (15%), Positives = 32/111 (28%)
Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
+ +Y + + R + V + + G + AA F+
Sbjct: 94 RQQKEYYTDLDTRLKKFEPEQKTVDGVEGTVQPGETDAFNAAQQQFRDGNFKAAAASFRS 153
Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
+ Y + + A L A AL + I ++PQ A
Sbjct: 154 FITKYPQSPYQPSAQYWLGNAQYALRDYRGSTATWQGIVSKFPQHPRAADA 204
Score = 37.5 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 14/125 (11%), Positives = 40/125 (32%), Gaps = 14/125 (11%)
Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
+ K + +Y SPY A++++ G +Y
Sbjct: 136 QQQFRDGNFKAAAASFRSFITKYPQSPYQPSAQYWL--------------GNAQYALRDY 181
Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
+ +Q +++ + A +A+ + + A++ + +Y A+
Sbjct: 182 RGSTATWQGIVSKFPQHPRAADALVAIGTNQLEQGQKAAAKKTFEQVVSQYNGTSAAQTA 241
Query: 267 ETLVK 271
+ ++
Sbjct: 242 QGKLQ 246
>gi|163854961|ref|YP_001629259.1| putative periplasmic protein [Bordetella petrii DSM 12804]
gi|163258689|emb|CAP40988.1| putative periplasmic protein [Bordetella petrii]
Length = 225
Score = 39.8 bits (90), Expect = 0.38, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 31/79 (39%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ +G +Y AI + ++ D A +A+ + + + L A+ +
Sbjct: 144 KFYLGSSRYAAKDYKGAIEQLNQLVQESPDNARAPDALLVIAGSQIELNNRAGAKASLQR 203
Query: 253 IQERYPQGYWARYVETLVK 271
I + YP A ++ ++
Sbjct: 204 IVKDYPSTPAAETAKSRLQ 222
>gi|320323044|gb|EFW79133.1| tol-pal system protein YbgF [Pseudomonas syringae pv. glycinea str.
B076]
gi|320329684|gb|EFW85673.1| tol-pal system protein YbgF [Pseudomonas syringae pv. glycinea str.
race 4]
Length = 208
Score = 39.8 bits (90), Expect = 0.38, Method: Composition-based stats.
Identities = 16/111 (14%), Positives = 36/111 (32%), Gaps = 1/111 (0%)
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI-GRYYLKRGEYVAAIPRFQLVLANY 220
I + + F + A G L +G+ A F V Y
Sbjct: 96 FDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGDLQGAGQAFAKVSQQY 155
Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+++ +L + L D+ + ++ + +YP A+ + ++
Sbjct: 156 PKHAKVPDSLYKLADVERRLGHTDKVKGILQQVVAQYPGTSAAQLAQRDLQ 206
Score = 38.2 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 32/83 (38%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
D ++ YE A +K ++F KA + F R +P + A + V + G
Sbjct: 81 EPPDPTKEKLYYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGD 140
Query: 110 YQQAASLGEEYITQYPESKNVDY 132
Q A + QYP+ V
Sbjct: 141 LQGAGQAFAKVSQQYPKHAKVPD 163
Score = 37.9 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 28/77 (36%)
Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242
E +K ++ A F L Y ++ +A A L E +A
Sbjct: 81 EPPDPTKEKLYYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGD 140
Query: 243 MDEAREVVSLIQERYPQ 259
+ A + + + ++YP+
Sbjct: 141 LQGAGQAFAKVSQQYPK 157
>gi|291549329|emb|CBL25591.1| hypothetical protein RTO_08900 [Ruminococcus torques L2-14]
Length = 487
Score = 39.8 bits (90), Expect = 0.38, Method: Composition-based stats.
Identities = 11/95 (11%), Positives = 28/95 (29%)
Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
K ++ A K E + + ++ + +A+ RL +
Sbjct: 343 KEMYDTLSDSIFPTACKRRYAAGVDSLESEDYDQAIEYLTKVVKMDESYNDGQAIYRLAQ 402
Query: 236 AYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
AY + A+ + + Y + + +
Sbjct: 403 AYQGKGDTENAKTWYQKMVDTYNNSRYIEDAKKQL 437
>gi|242281032|ref|YP_002993161.1| N-acetylmuramoyl-L-alanine amidase [Desulfovibrio salexigens DSM
2638]
gi|242123926|gb|ACS81622.1| N-acetylmuramoyl-L-alanine amidase [Desulfovibrio salexigens DSM
2638]
Length = 587
Score = 39.8 bits (90), Expect = 0.38, Method: Composition-based stats.
Identities = 15/98 (15%), Positives = 32/98 (32%), Gaps = 16/98 (16%)
Query: 190 AAKEVEIGRYYLKRGEYVAAI----PRFQLVLANYSDAEHAEEAMARLVEAYVALA---- 241
A K+ K+ +Y + +F+ V + ++A +++ L Y L
Sbjct: 39 AWKQFHALSKNQKKAKYRSEWEKVGKKFRNVFKRSTRGQYAPKSLYYLGRTYEELGNRSG 98
Query: 242 ---LMDEAREVVSLIQERYPQGYW-----ARYVETLVK 271
A + + +P W R E ++
Sbjct: 99 IKKDFRTAVDYYGRMISNFPSHQWTDDSIYRRAEIRLR 136
Score = 36.3 bits (81), Expect = 4.9, Method: Composition-based stats.
Identities = 16/141 (11%), Positives = 43/141 (30%), Gaps = 8/141 (5%)
Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
D+ + + + + + + +R T Y + +Y+ +L
Sbjct: 35 DFTIAWKQFHALSKNQKKAKYRSEWEKVGKKFRNVFKRSTRGQYAPKSLYYLGRTYEELG 94
Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA-YVALALMDEAREV 249
+ + A+ + +++N+ + ++++ R E L D A
Sbjct: 95 NRSGIKKDFR-------TAVDYYGRMISNFPSHQWTDDSIYRRAEIRLRKLHEKDLAYSD 147
Query: 250 VSLIQERYPQGYWARYVETLV 270
I RY + +
Sbjct: 148 YLTIVHRYAKSDMYSQARKRL 168
>gi|223934944|ref|ZP_03626863.1| TPR repeats containing protein [bacterium Ellin514]
gi|223896397|gb|EEF62839.1| TPR repeats containing protein [bacterium Ellin514]
Length = 335
Score = 39.8 bits (90), Expect = 0.38, Method: Composition-based stats.
Identities = 30/216 (13%), Positives = 68/216 (31%), Gaps = 9/216 (4%)
Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
A ++++ A + + ++P + A K+ ++A + ++A ++ + +
Sbjct: 57 AQQAFDKKDYGLALKAARRVVSNWPLSDFAPKAEYLAARCYEEKTQDEKAFKEYQKLLEK 116
Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
YP++ N + + + + M + VE Y
Sbjct: 117 YPKADNYQEILQRQFAICNRFLGGQWFKLWGYIPFFPNMDKTVEMYEMIIKNGPYSDIAP 176
Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE-HAEEAMARLVEAYVALAL 242
+ + A + R+ Y+ A ++ Y D A +A+ + AY A
Sbjct: 177 QAQMDIGAAREKQTRFLNGNEPYIQAAKAYERAADRYHDQPKFAADALYKAGLAYNKQAR 236
Query: 243 MDE--------AREVVSLIQERYPQGYWARYVETLV 270
E A + YP E +
Sbjct: 237 TAEYDQNTAGQAIATFTDFMTLYPNDPRVSESEKTI 272
>gi|324502359|gb|ADY41039.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
[Ascaris suum]
Length = 1100
Score = 39.8 bits (90), Expect = 0.38, Method: Composition-based stats.
Identities = 18/194 (9%), Positives = 43/194 (22%), Gaps = 6/194 (3%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE-- 119
A + + +A + + P R L + + E
Sbjct: 173 NLAAALVAGGDLEQAVSAYLSALQYNPDLYCVRSDLGNLLKAMGRLEEAKVCYLKAIETQ 232
Query: 120 -YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
+ + + +++ A
Sbjct: 233 PQFAVAWSNLGCVFNAQGEIWLAIHHFEKAVQLDPNFLDAYINLGNVLKEARIFDRAVAA 292
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
A + Y ++G AI ++ + + +A L A
Sbjct: 293 YLRALNLAGNHAVVHGNLACVYYEQGLIDLAIDMYRKAIELQPNFP---DAYCNLANALK 349
Query: 239 ALALMDEAREVVSL 252
L++EA + +
Sbjct: 350 EKGLVEEAEKAYNT 363
>gi|254882716|ref|ZP_05255426.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
gi|254835509|gb|EET15818.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
Length = 666
Score = 39.8 bits (90), Expect = 0.38, Method: Composition-based stats.
Identities = 25/216 (11%), Positives = 61/216 (28%), Gaps = 7/216 (3%)
Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
+ ++ + ++ Y +AV + +F + E F
Sbjct: 434 FSQRFNNRQSIEKALKQAQADVQYVEAVQHFDKGDFERFLEQFFLAIHSRYDIEKPLIKR 493
Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
+ + + L +++ Q + YYL+G D
Sbjct: 494 FIRKKLGIINNLKVENKRLKDQFHVQRKNLEKYAREYYLMGNECIIQAHDSRAAIANYDK 553
Query: 158 ML---QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
+ + R + + + V N+ + + RG+ A+ +
Sbjct: 554 AIELNPSYTDAWIRKGITLHNDKEYYEAEVCLNEAVRLSPALFKAIYNRGKNRLALDNIE 613
Query: 215 LVLANYSDA----EHAEEAMARLVEAYVALALMDEA 246
L ++ A +A +A + + +EA
Sbjct: 614 GALGDFDRAVSLKPEHPKAHEYFGDALMRVGKEEEA 649
>gi|127512458|ref|YP_001093655.1| TPR repeat-containing protein [Shewanella loihica PV-4]
gi|126637753|gb|ABO23396.1| Tetratricopeptide TPR_2 repeat protein [Shewanella loihica PV-4]
Length = 240
Score = 39.8 bits (90), Expect = 0.38, Method: Composition-based stats.
Identities = 16/70 (22%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
K +Y AIP F+ +A Y ++ +A A L + + EA + + + ++ +
Sbjct: 132 KERQYDEAIPAFREFIAQYPNSTYAANANYWLGQLLYNKGELAEAGKAFNTVVNQFKESN 191
Query: 262 WARYVETLVK 271
+ ++LVK
Sbjct: 192 --KRGDSLVK 199
>gi|311748135|ref|ZP_07721920.1| putative soluble lytic murein transglycosylase [Algoriphagus sp.
PR1]
gi|126576621|gb|EAZ80869.1| putative soluble lytic murein transglycosylase [Algoriphagus sp.
PR1]
Length = 359
Score = 39.8 bits (90), Expect = 0.38, Method: Composition-based stats.
Identities = 22/207 (10%), Positives = 38/207 (18%), Gaps = 14/207 (6%)
Query: 24 LTIFFSIAVCFLVGW-ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
+ I FSI L G S ++A + + E+N++ A
Sbjct: 3 ILILFSILAQLLSGCNSSNKKNKTEKLSDVKEMTD----DQATVSVNEENYALAMADMAM 58
Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
A + + G +
Sbjct: 59 QREFEQGANNTNWHHHYDIMELDKQPAPMMNRDTKYSFSILDGGGDVAITLPETDGRYMS 118
Query: 143 QMIRDVPYDQR--------ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
I + + V K Q K
Sbjct: 119 LHIWNHDHVTYKVFYGPGRYVIPASVTSDYFVANVRTQVDSKDPEDVKKSSEFQNQLKIE 178
Query: 195 EIGRYYLKRGEYVA-AIPRFQLVLANY 220
+ Y K + F + Y
Sbjct: 179 YLDGYQPKPFRATKWNMDEFNKIHQKY 205
>gi|238788172|ref|ZP_04631967.1| Type IV pilus bioproteinsis/stability protein PilW [Yersinia
frederiksenii ATCC 33641]
gi|238723759|gb|EEQ15404.1| Type IV pilus bioproteinsis/stability protein PilW [Yersinia
frederiksenii ATCC 33641]
Length = 244
Score = 39.8 bits (90), Expect = 0.38, Method: Composition-based stats.
Identities = 32/242 (13%), Positives = 68/242 (28%), Gaps = 17/242 (7%)
Query: 30 IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89
+ L G S V + R + + +L + + + A + + P
Sbjct: 6 LIATVLAGCSGSSPEKVSQPAAGQTRL-----QLGLEYLAQGDLNAARQNLEKAVAADPQ 60
Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
++ L AF + G+ A ++ + P + V Y S Q +
Sbjct: 61 D---YRAQLGMAFYEQRIGENAAAEQRYQQAMKLAPGNGTVMNNYGAFLCSLGQYVPAQQ 117
Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN------QLAAKEVEIGRYYLKR 203
A ++ + N+ Y R + + E +R
Sbjct: 118 QFSAAVLS--PDYGQVADSLENAGYCFLRANQNDQARVLLSRALKYDPDKGEPLLAEAQR 175
Query: 204 GEYVAAIPRFQLVLANYSDA-EHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
+ QL+L Y + E++ + D + + +PQ
Sbjct: 176 HFGEGNRAQAQLLLDVYQHVLPASAESLWLQIRFAALAGRQDSVQRYGKQLARSFPQSKQ 235
Query: 263 AR 264
+
Sbjct: 236 YQ 237
>gi|330509140|ref|YP_004385568.1| TPR-repeat-containing protein [Methanosaeta concilii GP-6]
gi|328929948|gb|AEB69750.1| TPR-repeat protein [Methanosaeta concilii GP-6]
Length = 293
Score = 39.8 bits (90), Expect = 0.39, Method: Composition-based stats.
Identities = 28/248 (11%), Positives = 75/248 (30%), Gaps = 17/248 (6%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
KFA+ F++ + LV + + +V + Y+K ++ ++ +A + +
Sbjct: 19 KFAVRARFALVMIALV--------ILCVSAVAQEMIAEDWYKKGQELERKGSYEEAVKAY 70
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI---TQYPESKNVDYVYYLV 137
++ P + S + + +A E Q + + +
Sbjct: 71 DKAIELNPKDIMVWLSKGIILSGLEQHNESIEAYETAIEIDPKSIQAWGTMADELYHLGR 130
Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
V I+ + A + + E
Sbjct: 131 YNESLNAYNRVLQMDPHMARAWVEKGDILNKTGRHEEAIKAFNKALEIYDNTIQENPEDI 190
Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAE------HAEEAMARLVEAYVALALMDEAREVVS 251
+ +G + + R++ + +Y +A A + + A+ +E+ + +
Sbjct: 191 IAWQGKGITLEKMGRYEEAIKSYDKVIEMSSPDYALGAWTAKGDIFKAIGKYEESIKAYN 250
Query: 252 LIQERYPQ 259
+ E P+
Sbjct: 251 KVIEIAPK 258
>gi|212703030|ref|ZP_03311158.1| hypothetical protein DESPIG_01068 [Desulfovibrio piger ATCC 29098]
gi|212673618|gb|EEB34101.1| hypothetical protein DESPIG_01068 [Desulfovibrio piger ATCC 29098]
Length = 341
Score = 39.8 bits (90), Expect = 0.39, Method: Composition-based stats.
Identities = 14/64 (21%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
+ R Q +L + +A A L EA + +EA + ++ RYP + +
Sbjct: 238 EGMARMQALLDQHPSGAYAANAEYWLGEALSSQGRNEEALKHFRNVEARYP--KHHKNAD 295
Query: 268 TLVK 271
L++
Sbjct: 296 ALLR 299
Score = 35.2 bits (78), Expect = 9.8, Method: Composition-based stats.
Identities = 16/93 (17%), Positives = 26/93 (27%)
Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
R A A E +G +G A+ F+ V A Y
Sbjct: 235 RLDEGMARMQALLDQHPSGAYAANAEYWLGEALSSQGRNEEALKHFRNVEARYPKHHKNA 294
Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
+A+ R A + + +R+P
Sbjct: 295 DALLRTGMILRQQGDAAGAGKAFRQVVQRFPAS 327
>gi|212693711|ref|ZP_03301839.1| hypothetical protein BACDOR_03231 [Bacteroides dorei DSM 17855]
gi|212663732|gb|EEB24306.1| hypothetical protein BACDOR_03231 [Bacteroides dorei DSM 17855]
Length = 513
Score = 39.8 bits (90), Expect = 0.39, Method: Composition-based stats.
Identities = 33/275 (12%), Positives = 61/275 (22%), Gaps = 27/275 (9%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK--- 75
+ K ++ F++A L DS+ Y A L +
Sbjct: 1 MKKIYKSLVFTMATIALTSCVNDWLDLTPSDSIPSN-SAITNYNDAKTALY-GMYDGLQG 58
Query: 76 --------AYEYFN--QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP 125
A F D A ++Y+ ++ + +
Sbjct: 59 NSTYTQYYAARMFYYGDVRGDDMQARTQGMRSSSCYEMKYTIDDAPNMWNVQYNVLRRAN 118
Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI-VERYTNSPYVKGARFYVTV 184
+ Q + Y Q + L + + V S + V
Sbjct: 119 RLIEAVENNKITDAEKNQANVNNIYAQAKSVRALVHFDLVKVYGMPYSFDYGASMGVPIV 178
Query: 185 GRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA-----------NYSDAEHAEEAMARL 233
I Y + + + A A L
Sbjct: 179 TTPIDPLNASAIPGRNTVAEVYAQIVKDLTEAIDSKALNVSKSAGDNQGFIDEWAAKALL 238
Query: 234 VEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
Y+ + EA ++ I E P W +
Sbjct: 239 TRVYIYMGKNQEALDIAKNIIENSPYSLWTKAQYA 273
>gi|15645888|ref|NP_208066.1| paralysed flagella protein (pflA) [Helicobacter pylori 26695]
gi|2314439|gb|AAD08318.1| paralysed flagella protein (pflA) [Helicobacter pylori 26695]
Length = 801
Score = 39.8 bits (90), Expect = 0.39, Method: Composition-based stats.
Identities = 28/205 (13%), Positives = 55/205 (26%), Gaps = 17/205 (8%)
Query: 70 EQNFSKAYEYFNQ----CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP 125
++++ KA F + L + + I Q
Sbjct: 121 DRDYKKAIPLFVENDPKARMWQIIGYDQNIPFLSKKDNAQKGLNFPIVIKDAQTPIIQEL 180
Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
+ N + A + D +A L+ +SR + Y + + K +
Sbjct: 181 DVNNKPLLTTKGYDLNAYLEAKKQMDSQAYFDALRTISRAFKNYPQTMFKKDLYLLEIIA 240
Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
QL K+ I + NY + EA+ + +A +
Sbjct: 241 LGQLGIKK-------------SLLIDIGTQWIKNYPTDPNIPEALYYVAKALDENNHYKQ 287
Query: 246 AREVVSLIQERYPQGYWARYVETLV 270
A I Y +A + +
Sbjct: 288 AMRYYKRILLEYKNSRYAPLAQMRL 312
>gi|196228294|ref|ZP_03127161.1| hypothetical protein CfE428DRAFT_0325 [Chthoniobacter flavus
Ellin428]
gi|196227697|gb|EDY22200.1| hypothetical protein CfE428DRAFT_0325 [Chthoniobacter flavus
Ellin428]
Length = 812
Score = 39.8 bits (90), Expect = 0.39, Method: Composition-based stats.
Identities = 22/223 (9%), Positives = 49/223 (21%), Gaps = 7/223 (3%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
++R Y + L E F +A + + + F + + +
Sbjct: 379 EIEMRTALVHYRQGESLLAEIFFHRAAQGSEKLRVNATFDAALSALNRRNYESFFKDYRD 438
Query: 111 --QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
A + E ++ R ++ +
Sbjct: 439 LSNLAPNSALRSDLLLEEGFAQARAGDPHAGDTIELYLHNFPKHRRQNEAQVALAELAFA 498
Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL-----KRGEYVAAIPRFQLVLANYSDA 223
+ V I R + L ++ +
Sbjct: 499 DGDKLGAGRYLQVVDSSSPDTDTAARAACLAVFLADAETPPNPAKVIERARKFLHDFPRS 558
Query: 224 EHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
+ E +L + Y + A +LI P G +
Sbjct: 559 AYLPEVRMKLGQTYFSTGDHANAETQFTLIARENPNGPYTETA 601
>gi|148678797|gb|EDL10744.1| cDNA sequence BC023818 [Mus musculus]
Length = 569
Score = 39.8 bits (90), Expect = 0.39, Method: Composition-based stats.
Identities = 23/230 (10%), Positives = 59/230 (25%), Gaps = 11/230 (4%)
Query: 30 IAVCFLVGWERQSSRDVYLDSVTDVRY--------QREVYEKAVLFLKEQNFSKAYEYFN 81
+ + L W+ +++L + R + Y A + +A ++
Sbjct: 135 VLLLLLFSWKTVKQNEIWLSRESLFRSGVQTLPHNAKVHYNYANFLKDQGRNKEAIYHYR 194
Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
+ +P A +L A Y Q A + +
Sbjct: 195 TALKLYPRHASALNNLGTLTKDMAEAKMYYQKALQLHPQHNRALFNLGNLLKSQEKTEEA 254
Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
++++ ++ ++ + + + +
Sbjct: 255 IMLLKESIKYGPDFADAYSSLASLLAEQERFKEAEDIYQAGIKNCPDSSDLHNNYAVFLV 314
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
G A+ +Q + + A+ L Y +L +A E
Sbjct: 315 DSGFPEKAVAHYQQAIQL---SPSHHVAVVNLGRLYRSLGENSKAEEWYR 361
>gi|15606494|ref|NP_213874.1| hypothetical protein aq_1273 [Aquifex aeolicus VF5]
gi|18202108|sp|O67310|Y1273_AQUAE RecName: Full=UPF0169 lipoprotein aq_1273; Flags: Precursor
gi|2983713|gb|AAC07276.1| putative protein [Aquifex aeolicus VF5]
Length = 306
Score = 39.8 bits (90), Expect = 0.39, Method: Composition-based stats.
Identities = 37/182 (20%), Positives = 74/182 (40%), Gaps = 2/182 (1%)
Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRD--FPFAGVARKSLLMSAFVQYSAGKYQQA 113
Y +E YEK + ++ ++ A F + +K + Y Y A
Sbjct: 32 YAKEFYEKGLSEYRKGDYGDAKSNFEKALNYLEHLTPEQIKKVKYLLVKSAYKDKDYVDA 91
Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
E+++ YP SK + V+Y++ S ++ D DQ T ++ + +Y +S
Sbjct: 92 VVYAEDFLANYPGSKEAEEVFYILVDSLVKVAPDPYRDQTYTVEAIRKAKEFLAKYPDSR 151
Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
+ + + +LA E I ++Y + G A R++ VL N+ + E +
Sbjct: 152 FTRKVEEVIEEANKKLAYHEYYIAKFYEEYGYPYNAAIRYREVLINFPEYFSEERLAYKY 211
Query: 234 VE 235
++
Sbjct: 212 IK 213
>gi|148264976|ref|YP_001231682.1| TPR repeat-containing protein [Geobacter uraniireducens Rf4]
gi|146398476|gb|ABQ27109.1| TPR repeat-containing protein [Geobacter uraniireducens Rf4]
Length = 248
Score = 39.8 bits (90), Expect = 0.39, Method: Composition-based stats.
Identities = 30/247 (12%), Positives = 55/247 (22%), Gaps = 17/247 (6%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
K++L A C + Y+ + +L E N + A
Sbjct: 1 MKYSLLGLLLTAACLTSACALSEEARKK---------ESYHYQMGLSYLGENNITGALVE 51
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG-----EEYITQYPESKNVDYVY 134
F + + P L M F + +Q + N +
Sbjct: 52 FTEAEKIVPDDPELLNYLGMVYFRKNKFDVAEQKYLKALKLRPVYSEVRNNLGVNYLEMK 111
Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
I + + + V + +
Sbjct: 112 RWDDAIQQLKIVTEDIFYQNQDAATINLGLAYFGKGDYQQALSVFRSALVSYPRDPRLRM 171
Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
+GR Y + AI ++ D A L AY+ + A +
Sbjct: 172 SLGRVYFALDKIEMAIGEYKRAAEIQKDY---ANAYYYLGLAYLKIKDNSAAVTAFKDVV 228
Query: 255 ERYPQGY 261
P
Sbjct: 229 RIAPDSE 235
>gi|332663033|ref|YP_004445821.1| hypothetical protein Halhy_1049 [Haliscomenobacter hydrossis DSM
1100]
gi|332331847|gb|AEE48948.1| Tetratricopeptide TPR_1 repeat-containing protein
[Haliscomenobacter hydrossis DSM 1100]
Length = 947
Score = 39.8 bits (90), Expect = 0.40, Method: Composition-based stats.
Identities = 22/218 (10%), Positives = 51/218 (23%), Gaps = 5/218 (2%)
Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
Q+ R + R + V N+ KA + +
Sbjct: 106 AAQAIRKKIIHDPAHNDLARSAFMIGVCHKYLGNYDKAAKQVHSALAVSQKGQNHFMLAK 165
Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
+ Y YP + + + + L
Sbjct: 166 EYLELGDIFEFLGDFDHSINCYERAYPHILKSTRDRATLLEDHFKRQAQAYLAKEKHHLA 225
Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
L+ + + ++A + + +Y +A Q L
Sbjct: 226 LEKNRQAI----KVCLDSIRPDLADRFHAEIADCYTNMNISFRATNQYDSAYWCLQQALK 281
Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
Y + + A+ + Y L + A++ + +
Sbjct: 282 YYQKSNLVDIAL-NIGNVYNELGDLYMAKKQYATAIQN 318
>gi|331016447|gb|EGH96503.1| tol-pal system protein YbgF [Pseudomonas syringae pv. lachrymans
str. M302278PT]
Length = 208
Score = 39.8 bits (90), Expect = 0.40, Method: Composition-based stats.
Identities = 16/111 (14%), Positives = 36/111 (32%), Gaps = 1/111 (0%)
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI-GRYYLKRGEYVAAIPRFQLVLANY 220
I + + F + A G L +G+ A F V Y
Sbjct: 96 FDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGDLQGAGQAFAKVSQQY 155
Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+++ +L + L D+ + ++ + +YP A+ + ++
Sbjct: 156 PKHAKVPDSLYKLADVERRLGHTDKVKGILQQVVAQYPGTSAAQLAQRDLQ 206
Score = 38.2 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 32/83 (38%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
D ++ YE A +K ++F KA + F R +P + A + V + G
Sbjct: 81 EPPDPAKEKLYYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGD 140
Query: 110 YQQAASLGEEYITQYPESKNVDY 132
Q A + QYP+ V
Sbjct: 141 LQGAGQAFAKVSQQYPKHAKVPD 163
Score = 37.9 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 14/67 (20%), Positives = 28/67 (41%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
E +K ++ A F L Y ++ +A A L E +A + A + +
Sbjct: 91 YYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGDLQGAGQAFAK 150
Query: 253 IQERYPQ 259
+ ++YP+
Sbjct: 151 VSQQYPK 157
>gi|330964832|gb|EGH65092.1| tol-pal system protein YbgF [Pseudomonas syringae pv. actinidiae
str. M302091]
Length = 208
Score = 39.8 bits (90), Expect = 0.40, Method: Composition-based stats.
Identities = 16/111 (14%), Positives = 36/111 (32%), Gaps = 1/111 (0%)
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI-GRYYLKRGEYVAAIPRFQLVLANY 220
I + + F + A G L +G+ A F V Y
Sbjct: 96 FDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGDLQGAGQAFAKVSQQY 155
Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+++ +L + L D+ + ++ + +YP A+ + ++
Sbjct: 156 PKHAKVPDSLYKLADVERRLGHTDKVKGILQQVVAQYPGTSAAQLAQRDLQ 206
Score = 37.9 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 32/83 (38%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
D ++ YE A +K ++F KA + F R +P + A + V + G
Sbjct: 81 EPPDPAKEKLYYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGD 140
Query: 110 YQQAASLGEEYITQYPESKNVDY 132
Q A + QYP+ V
Sbjct: 141 LQGAGQAFAKVSQQYPKHAKVPD 163
Score = 37.9 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 14/67 (20%), Positives = 28/67 (41%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
E +K ++ A F L Y ++ +A A L E +A + A + +
Sbjct: 91 YYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGDLQGAGQAFAK 150
Query: 253 IQERYPQ 259
+ ++YP+
Sbjct: 151 VSQQYPK 157
>gi|330872645|gb|EGH06794.1| tol-pal system protein YbgF [Pseudomonas syringae pv. morsprunorum
str. M302280PT]
Length = 208
Score = 39.8 bits (90), Expect = 0.40, Method: Composition-based stats.
Identities = 16/111 (14%), Positives = 36/111 (32%), Gaps = 1/111 (0%)
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI-GRYYLKRGEYVAAIPRFQLVLANY 220
I + + F + A G L +G+ A F V Y
Sbjct: 96 FDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGDLQGAGQAFAKVSQQY 155
Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+++ +L + L D+ + ++ + +YP A+ + ++
Sbjct: 156 PKHAKVPDSLYKLADVERRLGHTDKVKGILQQVVAQYPGTSAAQLAQRDLQ 206
Score = 37.9 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 32/83 (38%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
D ++ YE A +K ++F KA + F R +P + A + V + G
Sbjct: 81 EPPDPAKEKLYYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGD 140
Query: 110 YQQAASLGEEYITQYPESKNVDY 132
Q A + QYP+ V
Sbjct: 141 LQGAGQAFAKVSQQYPKHAKVPD 163
Score = 37.9 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 14/67 (20%), Positives = 28/67 (41%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
E +K ++ A F L Y ++ +A A L E +A + A + +
Sbjct: 91 YYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGDLQGAGQAFAK 150
Query: 253 IQERYPQ 259
+ ++YP+
Sbjct: 151 VSQQYPK 157
>gi|331092380|ref|ZP_08341206.1| hypothetical protein HMPREF9477_01849 [Lachnospiraceae bacterium
2_1_46FAA]
gi|330401404|gb|EGG80990.1| hypothetical protein HMPREF9477_01849 [Lachnospiraceae bacterium
2_1_46FAA]
Length = 449
Score = 39.8 bits (90), Expect = 0.40, Method: Composition-based stats.
Identities = 9/43 (20%), Positives = 18/43 (41%)
Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
+A+ L +AY ++A+ + E YP A + +
Sbjct: 392 KALLNLAKAYEKAGKTEQAKTTYKRVAELYPDSELASQAQQAL 434
>gi|257487002|ref|ZP_05641043.1| hypothetical protein PsyrptA_27255 [Pseudomonas syringae pv. tabaci
ATCC 11528]
gi|330988977|gb|EGH87080.1| tol-pal system protein YbgF [Pseudomonas syringae pv. lachrymans
str. M301315]
gi|331009356|gb|EGH89412.1| tol-pal system protein YbgF [Pseudomonas syringae pv. tabaci ATCC
11528]
Length = 208
Score = 39.8 bits (90), Expect = 0.40, Method: Composition-based stats.
Identities = 16/111 (14%), Positives = 36/111 (32%), Gaps = 1/111 (0%)
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI-GRYYLKRGEYVAAIPRFQLVLANY 220
I + + F + A G L +G+ A F V Y
Sbjct: 96 FDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGDLQGAGQAFAKVSQQY 155
Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+++ +L + L D+ + ++ + +YP A+ + ++
Sbjct: 156 PKHAKVPDSLYKLADVERRLGHTDKVKGILQQVVAQYPGTSAAQLAQRDLQ 206
Score = 37.9 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 32/83 (38%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
D ++ YE A +K ++F KA + F R +P + A + V + G
Sbjct: 81 EPPDPAKEKLYYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGD 140
Query: 110 YQQAASLGEEYITQYPESKNVDY 132
Q A + QYP+ V
Sbjct: 141 LQGAGQAFAKVSQQYPKHAKVPD 163
Score = 37.9 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 14/67 (20%), Positives = 28/67 (41%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
E +K ++ A F L Y ++ +A A L E +A + A + +
Sbjct: 91 YYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGDLQGAGQAFAK 150
Query: 253 IQERYPQ 259
+ ++YP+
Sbjct: 151 VSQQYPK 157
>gi|163758788|ref|ZP_02165875.1| hypothetical protein HPDFL43_15232 [Hoeflea phototrophica DFL-43]
gi|162284078|gb|EDQ34362.1| hypothetical protein HPDFL43_15232 [Hoeflea phototrophica DFL-43]
Length = 320
Score = 39.8 bits (90), Expect = 0.40, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+ G ++ G+Y A F +A Y + A +AM L EA + ++ + +
Sbjct: 200 YQAGYNHMLTGDYALAEQVFGDYIAAYPEGGRAADAMFWLGEAQYSQGRYQDSAKTFLDV 259
Query: 254 QERYPQGYWARYVETLVK 271
++YPQ + ++L+K
Sbjct: 260 HKKYPQAD--KGADSLLK 275
>gi|294341057|emb|CAZ89452.1| putative Tol-Pal system, YbgF protein [Thiomonas sp. 3As]
Length = 271
Score = 39.8 bits (90), Expect = 0.40, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 34/89 (38%)
Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
A + + + +Y AI FQ ++ + + EAM L + +
Sbjct: 179 QYPSSPYDADAQYWLANAQYAQKQYKDAIASFQGLIQSSPNNPRLPEAMLGLANCQIEVR 238
Query: 242 LMDEAREVVSLIQERYPQGYWARYVETLV 270
+ AR+ ++ + + YPQ A+ +
Sbjct: 239 QIVAARKTLNELVKTYPQSEAAQAGRDRL 267
Score = 37.1 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 11/73 (15%), Positives = 23/73 (31%)
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
E + G++ + + + LA Y + + +A L A A +A +
Sbjct: 154 FEQALATFRNGDFAGSATQLKAFLAQYPSSPYDADAQYWLANAQYAQKQYKDAIASFQGL 213
Query: 254 QERYPQGYWARYV 266
+ P
Sbjct: 214 IQSSPNNPRLPEA 226
>gi|332291632|ref|YP_004430241.1| hypothetical protein Krodi_0989 [Krokinobacter diaphorus 4H-3-7-5]
gi|332169718|gb|AEE18973.1| hypothetical protein Krodi_0989 [Krokinobacter diaphorus 4H-3-7-5]
Length = 597
Score = 39.8 bits (90), Expect = 0.40, Method: Composition-based stats.
Identities = 27/243 (11%), Positives = 73/243 (30%), Gaps = 6/243 (2%)
Query: 35 LVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR 94
+ + + + + R+ ++ A L ++ + E FNQ +
Sbjct: 347 FLAFNMEQPDEAIAYLKKGIEIPRDRFDHARLKMELADILVLTEKFNQALIYYSQIQNEI 406
Query: 95 KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
++ ++S ++ K + + +Q K ++ +
Sbjct: 407 QNNVISQEARFKVAKTSYYKADFDWAESQLNVLKAGATQLIANDALELLLVIRDNSMDDS 466
Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE-----IGRYYLKRGEYVAA 209
+ L+ + + + Y + K + + Y ++ + A
Sbjct: 467 LQTALKKYATADLLAFQNKPEEAIALYEDILEKHKGEKIEDEALLSQAKLYERKEAFAKA 526
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVA-LALMDEAREVVSLIQERYPQGYWARYVET 268
+ ++ YSD A++A RL Y L ++A+ I + +
Sbjct: 527 EKNYLTIIEYYSDGVLADDAYYRLARLYEGPLNQPEKAKNNYERIIFDLADSIYYVEAQK 586
Query: 269 LVK 271
+
Sbjct: 587 RFR 589
>gi|121608001|ref|YP_995808.1| hypothetical protein Veis_1013 [Verminephrobacter eiseniae EF01-2]
gi|121552641|gb|ABM56790.1| Tetratricopeptide TPR_2 repeat protein [Verminephrobacter eiseniae
EF01-2]
Length = 265
Score = 39.8 bits (90), Expect = 0.40, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 30/78 (38%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+G EY AI F+ +L++ A EA + + L AR+ +
Sbjct: 184 RFWLGNAQYATREYQEAIVNFRQLLSDTPGHARAPEAALSIANCQMELKDTRSARKTLED 243
Query: 253 IQERYPQGYWARYVETLV 270
+ + YPQ A + +
Sbjct: 244 LLQAYPQSEAALAAKERL 261
>gi|330901398|gb|EGH32817.1| competence lipoprotein ComL, putative [Pseudomonas syringae pv.
japonica str. M301072PT]
Length = 166
Score = 39.8 bits (90), Expect = 0.41, Method: Composition-based stats.
Identities = 31/147 (21%), Positives = 60/147 (40%), Gaps = 10/147 (6%)
Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
+ + + + E+Y++A L +++ A E +PF A ++ L + Y
Sbjct: 19 SSKEVIDENLSEVELYQQAQADLGNNSYNSATEKLKALESRYPFGRYADQAQLELIYSNY 78
Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI----------RDVPYDQRAT 155
G+ + A S E +I +P+ NVDY YY+ G++ D A
Sbjct: 79 KNGEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDVGLLARFLPLDQTKRDPGAA 138
Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYV 182
+ +++ R+ NS Y A+ +
Sbjct: 139 RDSFNEFAQLTSRFPNSRYAPDAKQRM 165
>gi|317051742|ref|YP_004112858.1| hypothetical protein Selin_1572 [Desulfurispirillum indicum S5]
gi|316946826|gb|ADU66302.1| hypothetical protein Selin_1572 [Desulfurispirillum indicum S5]
Length = 319
Score = 39.8 bits (90), Expect = 0.41, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 28/86 (32%)
Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
N+ A G + G+ AI F+ Y A+ + A+ AL
Sbjct: 234 DNERAGIMYWYGSAVQRLGDERNAILIFEEQAKKYPRHWSTAFAILKQGHAFRALGDTGT 293
Query: 246 AREVVSLIQERYPQGYWARYVETLVK 271
A+ + +P A Y ++
Sbjct: 294 AKLFYQRVLSEFPDSDAANYARRALE 319
>gi|238794832|ref|ZP_04638433.1| Type IV pilus bioproteinsis/stability protein PilW [Yersinia
intermedia ATCC 29909]
gi|238725845|gb|EEQ17398.1| Type IV pilus bioproteinsis/stability protein PilW [Yersinia
intermedia ATCC 29909]
Length = 234
Score = 39.8 bits (90), Expect = 0.41, Method: Composition-based stats.
Identities = 26/237 (10%), Positives = 61/237 (25%), Gaps = 17/237 (7%)
Query: 35 LVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR 94
+ G S V + R + + +L + + + A + + P A+
Sbjct: 1 MAGCSGSSPEKVSQPTAGQTRL-----QLGLEYLAQGDLNAARQNLEKAVEADPQDYRAQ 55
Query: 95 KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
+ Y + +A+ N + Q +
Sbjct: 56 LGM-----ALYEQRIGENSAAEQRYQQAMKLAPGNGTVLNNYGAFLCGLGQYVPAQQQFS 110
Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN------QLAAKEVEIGRYYLKRGEYVA 208
+L ++ + N+ Y R + + E +R
Sbjct: 111 AAALLPDYGQVADSLENAGYCFLRANQNDQARILLSRALKYDPDKGEPLLAEAQRHFGEG 170
Query: 209 AIPRFQLVLANYSDA-EHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
+ QL+L Y + E++ + D + + +PQ +
Sbjct: 171 NRAQAQLLLDVYQHTLPASAESLWLQIRFAALAGRQDSVQRYGKQLARSFPQSKQYQ 227
>gi|187250984|ref|YP_001875466.1| hypothetical protein Emin_0574 [Elusimicrobium minutum Pei191]
gi|186971144|gb|ACC98129.1| hypothetical protein Emin_0574 [Elusimicrobium minutum Pei191]
Length = 549
Score = 39.8 bits (90), Expect = 0.41, Method: Composition-based stats.
Identities = 13/87 (14%), Positives = 30/87 (34%), Gaps = 12/87 (13%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K L + +I V L G Q++ +++ E+ + +E N+ A +
Sbjct: 1 MLKKKLVLLMAIFVFILAGCTMQNT-----------SSAKQL-EQGKKYYEEGNYDAARD 48
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQY 105
F A ++ ++
Sbjct: 49 NFIDVMMHGTPQEYAEANMYVNKIHNQ 75
>gi|146184699|ref|XP_001029949.2| SLEI family protein [Tetrahymena thermophila]
gi|146143045|gb|EAR82286.2| SLEI family protein [Tetrahymena thermophila SB210]
Length = 2342
Score = 39.8 bits (90), Expect = 0.41, Method: Composition-based stats.
Identities = 24/198 (12%), Positives = 57/198 (28%), Gaps = 1/198 (0%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
L+ +++ + KA E + + + +L + + + + +
Sbjct: 558 NMGYLYSQQKMYDKAIECYQSALQVNENSLKILNNLGYAYYKSNMHDQAIEIYKRVIQID 617
Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
+ + V Y + + + I + R+ Y + A
Sbjct: 618 PKSFLANYNIGVAYQMKNMFDEAIEFYKKVEEIFPKYFTVFIRLGNVYGEKKMYEEALEN 677
Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
++ K EI + + A + E+ +A L Y
Sbjct: 678 YNKVKDFSMEKLEEISNLENVDKMNLIEEVIGCYIKAIELNPEYV-QAYYYLAIIYQNTN 736
Query: 242 LMDEAREVVSLIQERYPQ 259
+DEA + + + PQ
Sbjct: 737 RVDEAIDYYQKVIQLDPQ 754
>gi|15606474|ref|NP_213854.1| hypothetical protein aq_1247 [Aquifex aeolicus VF5]
gi|2983687|gb|AAC07252.1| putative protein [Aquifex aeolicus VF5]
Length = 217
Score = 39.8 bits (90), Expect = 0.41, Method: Composition-based stats.
Identities = 18/121 (14%), Positives = 43/121 (35%), Gaps = 9/121 (7%)
Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
Y + +++Y NS Y A F++ +L E + + + +
Sbjct: 102 YKMKQLNEARDAFVEFIKKYPNSKYTDNAYFWLGKTFYELGNTERAKQIFNVLIKKCKSG 161
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
D + LV+ + ++EA +S+++E++P + + L
Sbjct: 162 EL---------PDCNKLPDTYFMLVKISLDEGNIEEANRYLSILEEKFPDAEATQRAKEL 212
Query: 270 V 270
+
Sbjct: 213 I 213
Score = 39.0 bits (88), Expect = 0.71, Method: Composition-based stats.
Identities = 10/64 (15%), Positives = 28/64 (43%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
E E K + A F + Y ++++ + A L + + L + A+++ ++
Sbjct: 94 EYENALELYKMKQLNEARDAFVEFIKKYPNSKYTDNAYFWLGKTFYELGNTERAKQIFNV 153
Query: 253 IQER 256
+ ++
Sbjct: 154 LIKK 157
>gi|322378669|ref|ZP_08053102.1| paralysed flagella protein [Helicobacter suis HS1]
gi|321148886|gb|EFX43353.1| paralysed flagella protein [Helicobacter suis HS1]
Length = 765
Score = 39.8 bits (90), Expect = 0.41, Method: Composition-based stats.
Identities = 20/145 (13%), Positives = 44/145 (30%), Gaps = 13/145 (8%)
Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
+ N ++ + D L+ + I++ Y ++ + K FY
Sbjct: 148 DVDNQPIMHAKDQGLGEYLNTKRLIDNGYYMEALESIVNILKLYPDTLFRKDLYFYEITA 207
Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
+ L K+ + + + Y + L AY + M +
Sbjct: 208 LSHLKKKQDLVIQVAS-------------QWIKLYPSDPQVPSVLYALGNAYSQINYMPQ 254
Query: 246 AREVVSLIQERYPQGYWARYVETLV 270
A I E YP+ ++ + +
Sbjct: 255 AASTFKRIIEEYPKSRYSPLSQMRL 279
>gi|260808877|ref|XP_002599233.1| hypothetical protein BRAFLDRAFT_64417 [Branchiostoma floridae]
gi|229284510|gb|EEN55245.1| hypothetical protein BRAFLDRAFT_64417 [Branchiostoma floridae]
Length = 3135
Score = 39.8 bits (90), Expect = 0.41, Method: Composition-based stats.
Identities = 29/219 (13%), Positives = 63/219 (28%), Gaps = 7/219 (3%)
Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99
+ + R + +YE +L ++SKA +F+Q + +K+
Sbjct: 854 SFEAALEEVGDSDRERLAKVIYELGKTWLCRNDYSKAIHFFDQSASMSKTIFGEKKAHGQ 913
Query: 100 SAFVQYSAGKYQQA------ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153
+ + G A A + E +S D + + + D
Sbjct: 914 TVSSLINLGMSYHALGDIKKAIIHYEQAIAMSKSFYGDDITLPTVATAFDNLGTCYKDLG 973
Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE-VEIGRYYLKRGEYVAAIPR 212
+ L Y + + + V Q ++G G + ++
Sbjct: 974 DLRKALTYCEQALAAKKGLSVLYEDDKTEIVITLQNVGNCLCDLGDQKKAIGYFEESLTM 1033
Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
+ + + S H A+ L + L +A
Sbjct: 1034 LKDMYGDSSTHPHIATALQNLGICWNELGDQKKAIGYFE 1072
>gi|42525963|ref|NP_971061.1| TPR domain-containing protein [Treponema denticola ATCC 35405]
gi|41816013|gb|AAS10942.1| TPR domain protein [Treponema denticola ATCC 35405]
Length = 992
Score = 39.8 bits (90), Expect = 0.41, Method: Composition-based stats.
Identities = 24/228 (10%), Positives = 60/228 (26%), Gaps = 12/228 (5%)
Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99
+S + D + + +Y + + ++ A + F P +A L
Sbjct: 94 NESIVILEKAKAIDSKNETTLYNLGNTYKQNGDYKHAIQCFTDVLDIKPDDALAYNHLGS 153
Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNV---DYVYYLVGMSYAQMIRDVPYDQRATK 156
F+ K + +G + +P Y + +
Sbjct: 154 VYFLCKDYPKALETYKIGLKVDPNHPFLNFNLAELYKEEKHYKEAINSYQTAMKTKPNWY 213
Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
L ++ + Q ++ + Y K E A ++
Sbjct: 214 EALAAIADCYVEMEELGKAIETYKMIIGSTGQSEENFTKLAKLYEKIHEDKDAEDFYKKA 273
Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER---YPQGY 261
++ + A A +++A + +++ YP
Sbjct: 274 VSINGNFLPAVLGYANMLKAQKR------YFDAYNILINNKEKYPNNK 315
Score = 39.4 bits (89), Expect = 0.60, Method: Composition-based stats.
Identities = 25/221 (11%), Positives = 61/221 (27%), Gaps = 10/221 (4%)
Query: 41 QSSRDVYLDSVTDVRYQREVYEK----AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
+ + + E Y+ L+++ + K E + + + P +
Sbjct: 23 FAEKILLNQLKKQKNTPDEYYQLKNLLGKLYIRSGDMKKGLEIYKELNSLNPNNSDILNN 82
Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM---IRDVPYDQR 153
+ + + + ++ + Y Y DV +
Sbjct: 83 MGVIYRRLNMFNESIVILEKAKAIDSKNETTLYNLGNTYKQNGDYKHAIQCFTDVLDIKP 142
Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213
L ++ + + P + Y + Y AI +
Sbjct: 143 DDALAYNHLGSVYFLCKDYPKALETYKIGLKVDPNHPFLNFNLAELYKEEKHYKEAINSY 202
Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
Q + + EA+A + + YV + + +A E +I
Sbjct: 203 QTAMKTKPN---WYEALAAIADCYVEMEELGKAIETYKMII 240
>gi|87311645|ref|ZP_01093762.1| Alpha-2-macroglobulin-like [Blastopirellula marina DSM 3645]
gi|87285648|gb|EAQ77565.1| Alpha-2-macroglobulin-like [Blastopirellula marina DSM 3645]
Length = 2753
Score = 39.8 bits (90), Expect = 0.41, Method: Composition-based stats.
Identities = 26/203 (12%), Positives = 52/203 (25%), Gaps = 13/203 (6%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
Y K + + ++ Q ++ +P + RK+ AG Y
Sbjct: 77 ENQGDPAYLTYLKGRAHFFAKQYKESIAVMTQLTKRYPDSAWTRKARFAIGVAYARAGDY 136
Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
+ A + + + + + + +
Sbjct: 137 RAAELAYQAEAEYLISLQRKEEIAAIYLEFADAFFAPPADGKHPDYQRALAFYQ------ 190
Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
+ R +++I R Y + AI +Q + D A
Sbjct: 191 -------KAAEIGPLRETNTRIQLQIARCYKQLNNPGQAIQLYQAFINANDDDVLLLPAR 243
Query: 231 ARLVEAYVALALMDEAREVVSLI 253
L EAY+ EAR +
Sbjct: 244 YELGEAYLQSGNRVEARRSWEDL 266
>gi|325959562|ref|YP_004291028.1| hypothetical protein Metbo_1834 [Methanobacterium sp. AL-21]
gi|325330994|gb|ADZ10056.1| Tetratricopeptide TPR_1 repeat-containing protein [Methanobacterium
sp. AL-21]
Length = 693
Score = 39.8 bits (90), Expect = 0.41, Method: Composition-based stats.
Identities = 20/213 (9%), Positives = 46/213 (21%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
D ++ KA F ++ E + + P A + +S
Sbjct: 398 EIDSNQVAALFLKARTQQNIAKFDESIETLERITSIDPDNDEAWFLIGVSQEYLNKPEDA 457
Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
+ + E + + ++ + ++ +
Sbjct: 458 LVSFNKAIEIEPKNIGAWYFKGRSLMMLGRADEALKSYEMVTLMDPENYEAFHLTGLINM 517
Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
A N + G + EA+
Sbjct: 518 EQGNYDEALKNFDAVLNISPDNIDVLINKGQAYGFMDKPEKALEYFDEALDLESDNVEAL 577
Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
A + D + + + E P+ WA
Sbjct: 578 NYRGVALKHMGDHDASIKTFEAVLEMEPENPWA 610
>gi|313681433|ref|YP_004059171.1| outer membrane assembly lipoprotein yfio [Sulfuricurvum kujiense
DSM 16994]
gi|313154293|gb|ADR32971.1| outer membrane assembly lipoprotein YfiO [Sulfuricurvum kujiense
DSM 16994]
Length = 258
Score = 39.8 bits (90), Expect = 0.41, Method: Composition-based stats.
Identities = 34/211 (16%), Positives = 72/211 (34%), Gaps = 9/211 (4%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + L ++ L G + + + YEK V + N +A
Sbjct: 1 MIRTWLIAITTL--ILLTGCGSKDLEEF-------NKPAEYWYEKMVTAVSNGNLERADS 51
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
YF+ + + ++ ++ A + +Y + +EYI +Y + +Y +L
Sbjct: 52 YFSSLQSEHISSPFLSEATMIMAQAHMAHEEYLLSEHFLDEYIRRYATPEGREYAEFLKI 111
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
+ + + DQ L + Y NS Y+ T + +I
Sbjct: 112 KAKFLALPNPGRDQGLIDETLNSVETFKRSYPNSMYLPLVHSMETQLQLARGVLNEQIAE 171
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
Y + G+ AA + + D+++ A
Sbjct: 172 LYERLGKPKAAGSYRTIAPVTWIDSKNIVRA 202
>gi|256074639|ref|XP_002573631.1| cell division cycle [Schistosoma mansoni]
gi|238658815|emb|CAZ29863.1| cell division cycle, putative [Schistosoma mansoni]
Length = 787
Score = 39.8 bits (90), Expect = 0.42, Method: Composition-based stats.
Identities = 18/199 (9%), Positives = 43/199 (21%), Gaps = 36/199 (18%)
Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
A + ++ A++ FN+ +G + L +
Sbjct: 384 AARAHMDNSDYQTAHKLFNEA---------------RRIEPWQLSGMDFYSTVLWQVQAD 428
Query: 123 QYPESKNVDYVY-YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
Q D + + + Q + +++ R ++ S Y +
Sbjct: 429 QELSQLAHDLLQLDRNAPEPWCVAGNCLSLQGEHEAAIKFFRRALQVSPTSAYAWTLLGH 488
Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
+ + A+ + Y
Sbjct: 489 EQSTLEEFDRALAAFQFALRIDPRHYN--------------------ALFGISNVYYKQE 528
Query: 242 LMDEAREVVSLIQERYPQG 260
D A + +PQ
Sbjct: 529 KFDLAENYLVRAVALFPQS 547
>gi|167590384|ref|ZP_02382772.1| hypothetical protein BuboB_33922 [Burkholderia ubonensis Bu]
Length = 665
Score = 39.8 bits (90), Expect = 0.42, Method: Composition-based stats.
Identities = 16/211 (7%), Positives = 49/211 (23%), Gaps = 4/211 (1%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
+ +L KA + + + + + + +
Sbjct: 157 PPDAEISIDALAGAGDAYLYLGEPGKAAAVYRRALTQASASPTDQATRGYQ-YGARTRPI 215
Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
+ + + + A +R + ++++
Sbjct: 216 ALREGLFWSYIDQGRAQDASKVLDEMGKSLPPAAQVRPHDPATDDYLRYYRLRAQLLLNT 275
Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
+ + + + AI + L ++ D+
Sbjct: 276 GRTEEGIAELEKIEKEVPFNSEISAAHADAISSQSHPRQAIAMYHATLTDHPDSVEN--- 332
Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQG 260
+A L A +A + AR++ +P
Sbjct: 333 LAGLGRASLAADDYETARKIDQTFGNTFPDN 363
>gi|118480069|ref|YP_897220.1| ABC transporter substrate-binding protein [Bacillus thuringiensis
str. Al Hakam]
gi|228936282|ref|ZP_04099081.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
thuringiensis serovar andalousiensis BGSC 4AW1]
gi|228948710|ref|ZP_04110988.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
thuringiensis serovar monterrey BGSC 4AJ1]
gi|229124520|ref|ZP_04253705.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
cereus 95/8201]
gi|118419294|gb|ABK87713.1| ABC transporter, substrate-binding protein [Bacillus
thuringiensis str. Al Hakam]
gi|228658860|gb|EEL14515.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
cereus 95/8201]
gi|228811017|gb|EEM57360.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
thuringiensis serovar monterrey BGSC 4AJ1]
gi|228823398|gb|EEM69231.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
thuringiensis serovar andalousiensis BGSC 4AW1]
Length = 273
Score = 39.8 bits (90), Expect = 0.42, Method: Composition-based stats.
Identities = 13/73 (17%), Positives = 25/73 (34%)
Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
+Q+ K LT S ++ L + + + L E+ EKA L+++
Sbjct: 1 MFQMKKLLLTALISTSIFGLAACGGKDNDEKKLVVGASNVPHAEILEKAKPLLEKKGIEL 60
Query: 76 AYEYFNQCSRDFP 88
+ F
Sbjct: 61 EVKKFQDYVLPNK 73
>gi|326430017|gb|EGD75587.1| mbre TPR repeat protein [Salpingoeca sp. ATCC 50818]
Length = 826
Score = 39.8 bits (90), Expect = 0.42, Method: Composition-based stats.
Identities = 23/222 (10%), Positives = 63/222 (28%), Gaps = 15/222 (6%)
Query: 50 SVTDVRYQREVYE-KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
D R +Y+ + + K + KA E+F + + + +
Sbjct: 309 EGEDGRNVAGLYDSLGIAYTKTGEYDKAIEHFEKALAIKVEVLGEKHPSTAHTYGNFGLP 368
Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMS--YAQMIRDVPYDQRATKLMLQYMSRIV 166
Q+ + + + + + + I ++ ++ + +
Sbjct: 369 YLQKGENDQAIKYFERSLAIKAETLGERHPDTALVYNNIGGAYENKAEYGKAIEQFQKAL 428
Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
+ K T G A + ++ E A + + N+ +
Sbjct: 429 AVKVETLGEKHPSTAQTYGNLGNAYYKQGKHDMAIEHAE-KALQVFVETLGENHPNTAQT 487
Query: 227 EEAMARLVEAYVALALMDEARE--------VVSLIQERYPQG 260
++ + AYV + +A + + E++P
Sbjct: 488 YKS---MGRAYVGKSDYIKAMQCYKKALAITARTLGEKHPDT 526
>gi|319643978|ref|ZP_07998553.1| helicase [Bacteroides sp. 3_1_40A]
gi|317384502|gb|EFV65469.1| helicase [Bacteroides sp. 3_1_40A]
Length = 669
Score = 39.8 bits (90), Expect = 0.42, Method: Composition-based stats.
Identities = 25/216 (11%), Positives = 61/216 (28%), Gaps = 7/216 (3%)
Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
+ ++ + ++ Y +AV + +F + E F
Sbjct: 437 FSQRFNNRQSIEKALKQAQADVQYVEAVQHFDKGDFERFLEQFFLAIHSRYDIEKPLIKR 496
Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
+ + + L +++ Q + YYL+G D
Sbjct: 497 FIRKKLGIINNLKVENKRLKDQFHVQRKNLEKYAREYYLMGNECIIQAHDSRAAIANYDK 556
Query: 158 ML---QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
+ + R + + + V N+ + + RG+ A+ +
Sbjct: 557 AIELNPSYTDAWIRKGITLHNDKEYYEAEVCLNEAVRLSPALFKAIYNRGKNRLALDNIE 616
Query: 215 LVLANYSDA----EHAEEAMARLVEAYVALALMDEA 246
L ++ A +A +A + + +EA
Sbjct: 617 GALGDFDRAVSLKPEHPKAHEYFGDALMRVGKEEEA 652
>gi|258404983|ref|YP_003197725.1| Tetratricopeptide TPR_2 repeat-containing protein [Desulfohalobium
retbaense DSM 5692]
gi|257797210|gb|ACV68147.1| Tetratricopeptide TPR_2 repeat protein [Desulfohalobium retbaense
DSM 5692]
Length = 563
Score = 39.8 bits (90), Expect = 0.42, Method: Composition-based stats.
Identities = 30/269 (11%), Positives = 72/269 (26%), Gaps = 39/269 (14%)
Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQRE---VYEKAVLFLKEQNFS 74
++ +F + VG +S+ D+ + + ++ KA L E N
Sbjct: 3 RMLRF----VLAFLALVCVGCTPRSAPDLTPPAQWQLSPAARTDFLFLKAQALLAEGNAP 58
Query: 75 KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
A + ++ + P + + + E + Q+ N+ +Y
Sbjct: 59 AAAQALSRALEEDPQPTLYLELAETYWRNEERQKAKTILKEATERFPDQFAFVANLAQIY 118
Query: 135 YLVGMSYAQMIRDVPYDQRATK---------------LMLQYMSRIVERYTNSPYVKGAR 179
A Y Q ++
Sbjct: 119 MAGQRPKAAAATLRSYIQDHPDNWTARAKLGEIQVRIQAFADAVDTLQTIPEPEREPEHL 178
Query: 180 FYVTVGR------NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA---------- 223
F++ + + + + + A + + +Y A
Sbjct: 179 FFLGQAQAGLGLLQKASDNLQSAVDKAPQMAKAWAELGYIRERQKDYPAAITAYTRLSEL 238
Query: 224 -EHAEEAMARLVEAYVALALMDEAREVVS 251
+E + RL+E ++ L D+A+ +
Sbjct: 239 QPDNQEVLIRLIELHLELNNPDKAQTLAE 267
>gi|182682233|ref|YP_001830393.1| type IV pilus biogenesis/stability protein PilW [Xylella fastidiosa
M23]
gi|182632343|gb|ACB93119.1| type IV pilus biogenesis/stability protein PilW [Xylella fastidiosa
M23]
gi|307578507|gb|ADN62476.1| fimbrial biogenesis protein [Xylella fastidiosa subsp. fastidiosa
GB514]
Length = 269
Score = 39.8 bits (90), Expect = 0.43, Method: Composition-based stats.
Identities = 23/267 (8%), Positives = 52/267 (19%), Gaps = 29/267 (10%)
Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE--------------- 62
L + + ++ L G S + VY
Sbjct: 1 MLQRDISLVLAFSSLLILSGCLVMSDKRETRIKSVQNLAP--VYNVRDDAKTRRRVALTQ 58
Query: 63 ---KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
+A + A E + + + +L + + + +
Sbjct: 59 KLGRAYNQFNAGD-DVAAEKLLEEVLRQDTSSIDAWTLRGTIYSKRGDVVHSGEYYRKAA 117
Query: 120 YITQYPESKNVDYVYYLVGMSY------AQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
+ +Y +L Y L +
Sbjct: 118 QLAPQRGDVLNNYGAWLCANGYPAEALVWFERAMADPAYGEQPGTLANSGGCALQAGQRD 177
Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
A + R + Y A + LA +
Sbjct: 178 RADHDLRRALELDPTNAYALESMARNEYDKHRYFEARAFSERRLAT--TVPATASVLKLA 235
Query: 234 VEAYVALALMDEAREVVSLIQERYPQG 260
++ L A + + +P+
Sbjct: 236 IQIEQELGDRAAASRYQQRLVKEFPET 262
>gi|313201449|ref|YP_004040107.1| type IV pilus biogenesis/stability protein pilw [Methylovorus sp.
MP688]
gi|312440765|gb|ADQ84871.1| type IV pilus biogenesis/stability protein PilW [Methylovorus sp.
MP688]
Length = 246
Score = 39.8 bits (90), Expect = 0.43, Method: Composition-based stats.
Identities = 26/242 (10%), Positives = 60/242 (24%), Gaps = 11/242 (4%)
Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
+ + L G Q ++ + R E + + + A E F + R
Sbjct: 1 MVVLIGLAGCAEQQAQPYSAGETSARERARVHTELGAGYFAQNQMAIALEEFTEAIRIDG 60
Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
+A L + + + I +Y +L +
Sbjct: 61 NYAMAYNGLGL-VYGALREDAKADSNFKRALQIEPNNSESRNNYGSFLCSRNRIDESIVQ 119
Query: 149 PYD------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
+ + + + +G + L ++
Sbjct: 120 FTEAVKNPLYATPGVAYMNAGICALKKKDEKSAEGYLEKALQAQPLLQTAAYQLATIQFN 179
Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
RG+ A + L N + + + L D L++++YP
Sbjct: 180 RGQVGIARNTLKNALVNNPG----PDTLWLGIRIERILGDRDAEASYALLLRKKYPNSEQ 235
Query: 263 AR 264
+
Sbjct: 236 TK 237
>gi|310793962|gb|EFQ29423.1| kinesin light chain [Glomerella graminicola M1.001]
Length = 794
Score = 39.8 bits (90), Expect = 0.43, Method: Composition-based stats.
Identities = 17/190 (8%), Positives = 49/190 (25%), Gaps = 6/190 (3%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
+ A+ + + + + + + + + + +A Q E
Sbjct: 604 DLAITYYAQGRYGELEKLKTEVQELEQQTPGHTHVESLWSMAKLAATYLAQGRHDEAEKT 663
Query: 122 TQYPESKNVDYVYYLVGMSYAQMI--RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
+ + + M QR + S ++ + +
Sbjct: 664 FSKVLVLHQEDFGETHPQTLMAMHGLAITYSIQRKYDEAEKTFSELLVLQQENFGKTYPQ 723
Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
+ + + K V + + + + D +A +L Y +
Sbjct: 724 TLLVMDDLASTYHDQGRYDKAEKIALEVLVLWQ-ENFGETHPDTV---KAKDKLAAIYHS 779
Query: 240 LALMDEAREV 249
DEA ++
Sbjct: 780 QGRYDEAEKI 789
>gi|116619653|ref|YP_821809.1| TPR repeat-containing protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116222815|gb|ABJ81524.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter
usitatus Ellin6076]
Length = 310
Score = 39.8 bits (90), Expect = 0.43, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 33/84 (39%), Gaps = 2/84 (2%)
Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
A K + R + G+Y A+ F L Y + + A A + + D+A
Sbjct: 166 PMPAQKLYDTARGDYQGGKYDLAVQEFADYLKYYGNTDLAPNAQFYVAMIHYGQKNYDDA 225
Query: 247 REVVSLIQERYPQGYWARYVETLV 270
+ ++ E+YP + E L+
Sbjct: 226 VKEFDMVLEKYPDNN--KTPEALL 247
Score = 38.6 bits (87), Expect = 0.93, Method: Composition-based stats.
Identities = 13/109 (11%), Positives = 35/109 (32%)
Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
+++Y+ A + + A + F + + +A + A + Y Y A
Sbjct: 166 PMPAQKLYDTARGDYQGGKYDLAVQEFADYLKYYGNTDLAPNAQFYVAMIHYGQKNYDDA 225
Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
+ + +YP++ G + +M +++
Sbjct: 226 VKEFDMVLEKYPDNNKTPEALLYKGRALVKMPGHKTDGAAEFMEVIRRF 274
>gi|326432879|gb|EGD78449.1| tetratricopeptide TPR_2 [Salpingoeca sp. ATCC 50818]
Length = 920
Score = 39.8 bits (90), Expect = 0.43, Method: Composition-based stats.
Identities = 17/209 (8%), Positives = 50/209 (23%), Gaps = 14/209 (6%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
++ + ++ +A Y+ +C + + + +
Sbjct: 509 NLGQVYYSKGDYDRAIHYYEKCLQIQLDTLGEKHPHTAGTYNNLGQVYESKGDYDRALAY 568
Query: 122 TQYPESKNVDYVYYLVGM--SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
+ +D + + + V + + Y + ++ ++ K
Sbjct: 569 FEKCLQIQLDTLGEKHPSTATTCGNLGQVYRSKGDYDRAIHYYEKCLQIQLDTLGEKHPH 628
Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
T G K + + + + D L + Y +
Sbjct: 629 TATTYGNLGQVYKSKG-DYDLATHYYQKSLQIKLDTLGEKHPDTATTYN---NLGQVYNS 684
Query: 240 LALMDEAREVVS--------LIQERYPQG 260
D A + E++P
Sbjct: 685 KGEYDRAIHYYEKSLQIKLDTLGEKHPDT 713
Score = 37.5 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 15/207 (7%), Positives = 50/207 (24%), Gaps = 14/207 (6%)
Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
++ + ++ +A Y+ +C + + + + + +
Sbjct: 385 GQVYCNKGDYDRAIHYYEKCLQIQLDTLEEKHPHTATTYNNLGHVYCSKCDYDRAIHYYD 444
Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYD--QRATKLMLQYMSRIVERYTNSPYVKGARFY 181
+D + + L+Y + ++ Y ++ + +
Sbjct: 445 KCLQIQLDTLGEKHAETARTYNNLGGVHCSMGEYDRALEYCQQSLQIYLDT-WGEKHPST 503
Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
T+ N + + + + L + Y +
Sbjct: 504 ATIHNNLGQVYYSKGDYDRAIHYYEKCLQIQLDTLGEKHPHTAGTYN---NLGQVYESKG 560
Query: 242 LMDEAREVVS--------LIQERYPQG 260
D A + E++P
Sbjct: 561 DYDRALAYFEKCLQIQLDTLGEKHPST 587
>gi|315636013|ref|ZP_07891272.1| competence lipoprotein [Arcobacter butzleri JV22]
gi|315479669|gb|EFU70343.1| competence lipoprotein [Arcobacter butzleri JV22]
Length = 223
Score = 39.8 bits (90), Expect = 0.43, Method: Composition-based stats.
Identities = 34/198 (17%), Positives = 72/198 (36%), Gaps = 7/198 (3%)
Query: 30 IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89
A G +S ++ + Y K + + + +A + + +
Sbjct: 21 CATFVFTGCSSKSEQEY-------NKPALYWYNKMMKQIASGDLDEADDTYTSLESEHRN 73
Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
+ ++++ +Y A +EYI ++ SK++DY YL + +
Sbjct: 74 SPYIPTAIMILVNAHIEEEEYALANFYLDEYIKKFGLSKDIDYARYLKIKANFLGFKYQF 133
Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
DQ+ L + E+Y NSPY+ + A+ + EI Y +R + +
Sbjct: 134 RDQQLIDDTLSQIQEFKEKYKNSPYMPLVDTINSRLYMSKASFDQEISELYTRRDKPLGT 193
Query: 210 IPRFQLVLANYSDAEHAE 227
+ V ++ D+ E
Sbjct: 194 EFYEEKVRGSWVDSSEIE 211
>gi|325475688|gb|EGC78864.1| TPR domain-containing protein [Treponema denticola F0402]
Length = 992
Score = 39.8 bits (90), Expect = 0.44, Method: Composition-based stats.
Identities = 24/228 (10%), Positives = 60/228 (26%), Gaps = 12/228 (5%)
Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99
+S + D + + +Y + + ++ A + F P +A L
Sbjct: 94 NESIVILEKAKAIDSKNETTLYNLGNTYKQNGDYKHAIQCFTDVLDIKPDDALAYNHLGS 153
Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNV---DYVYYLVGMSYAQMIRDVPYDQRATK 156
F+ K + +G + +P Y + +
Sbjct: 154 VYFLCKDYPKALETYKIGLKVDPNHPFLNFNLAELYKEEKHYKEAINSYQTAMKTKPNWY 213
Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
L ++ + Q ++ + Y K E A ++
Sbjct: 214 EALAAIADCYVEMEEFGKAIETYKMIIGSTGQSEENFTKLAKLYEKIHEDKDAEDFYKKA 273
Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER---YPQGY 261
++ + A A +++A + +++ YP
Sbjct: 274 VSINGNFLPAVLGYADMLKAQKR------YFDAYNILINNKEKYPDNK 315
Score = 39.4 bits (89), Expect = 0.48, Method: Composition-based stats.
Identities = 25/221 (11%), Positives = 60/221 (27%), Gaps = 10/221 (4%)
Query: 41 QSSRDVYLDSVTDVRYQREVYEK----AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
+ + + E Y+ L+++ + K E + + + P +
Sbjct: 23 FAEKILLNQLKKQKNTPDEYYQLKNLLGKLYIRSGDMKKGLEIYKELNSLNPNNSDILNN 82
Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM---IRDVPYDQR 153
+ + + + ++ + Y Y DV +
Sbjct: 83 MGVIYRRLNMFNESIVILEKAKAIDSKNETTLYNLGNTYKQNGDYKHAIQCFTDVLDIKP 142
Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213
L ++ + + P + Y + Y AI +
Sbjct: 143 DDALAYNHLGSVYFLCKDYPKALETYKIGLKVDPNHPFLNFNLAELYKEEKHYKEAINSY 202
Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
Q + + EA+A + + YV + +A E +I
Sbjct: 203 QTAMKTKPN---WYEALAAIADCYVEMEEFGKAIETYKMII 240
>gi|229199131|ref|ZP_04325814.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
cereus m1293]
gi|228584402|gb|EEK42537.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
cereus m1293]
Length = 273
Score = 39.8 bits (90), Expect = 0.44, Method: Composition-based stats.
Identities = 22/205 (10%), Positives = 49/205 (23%), Gaps = 3/205 (1%)
Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
+Q+ K LT S ++ L + + + L E+ EKA L+++
Sbjct: 1 MFQMKKLLLTALISTSIFGLAACGGKDNDEKKLVVGASNVPHAEILEKAKPLLEKKGIEL 60
Query: 76 AYEYFNQCSRDFP---FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132
+ F + +++ + + + + + Y
Sbjct: 61 EVKKFQDYVLPNKSLADKDLDANYFQHIPYLEKEMKDKKYDFEVAGKIHLEPIGVYSQKY 120
Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
A +I L + I++ VK + L K
Sbjct: 121 KSLKELPDGATIIMSNSVADHGRGLAILQKEGILKIKDGVDPVKATPKDIADNPKNLKFK 180
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVL 217
+
Sbjct: 181 TDIEPGLLPQVYNNKEGDAVLINSN 205
>gi|225166241|ref|ZP_03727945.1| tetratricopeptide TPR_2 repeat protein [Opitutaceae bacterium TAV2]
gi|224799519|gb|EEG18044.1| tetratricopeptide TPR_2 repeat protein [Opitutaceae bacterium TAV2]
Length = 218
Score = 39.8 bits (90), Expect = 0.44, Method: Composition-based stats.
Identities = 20/89 (22%), Positives = 39/89 (43%), Gaps = 2/89 (2%)
Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
Y + + A + + R + G +AI + V +Y + +A EA+ RL Y
Sbjct: 48 YFSSTEGRNALELMNKARADEEAGHESSAIKGYLQVTKSYGTSIYAPEALFRLGGLYNKE 107
Query: 241 ALMDEAREVVSLIQERYPQGYWARYVETL 269
+A + I ++P +A++ ET+
Sbjct: 108 RKFTKAFDAYQEIVSKHPN--YAKFNETI 134
Score = 38.6 bits (87), Expect = 0.98, Method: Composition-based stats.
Identities = 14/113 (12%), Positives = 34/113 (30%), Gaps = 1/113 (0%)
Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGAR-FYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
+R IV ++ N + + I +
Sbjct: 104 YNKERKFTKAFDAYQEIVSKHPNYAKFNETIGAQYRIATGLVDGARGRILGVFPGFKNRG 163
Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
+ + + +L + +E+A A+ + + + D A + + + YPQ
Sbjct: 164 KGVEQLEKILVSAPYSEYAPLALMSIARGHSLMGDPDGAIDALDRMINNYPQN 216
>gi|189463929|ref|ZP_03012714.1| hypothetical protein BACINT_00263 [Bacteroides intestinalis DSM
17393]
gi|189438502|gb|EDV07487.1| hypothetical protein BACINT_00263 [Bacteroides intestinalis DSM
17393]
Length = 666
Score = 39.8 bits (90), Expect = 0.44, Method: Composition-based stats.
Identities = 15/143 (10%), Positives = 30/143 (20%), Gaps = 17/143 (11%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + L +FF A+ FL S +A + A
Sbjct: 1 MKLYKLFLFFLCAILFLTSCGVGRSL-----------------RQAEQSYARGEYFDAAR 43
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
++ P +++ +L + + +YL
Sbjct: 44 HYKTAYTRTPPKDRSQRGVLAYKQGDCYRRINYTLKAKAAYMNAVRYRHPDTLSHFYLAE 103
Query: 139 MSYAQMIRDVPYDQRATKLMLQY 161
M L
Sbjct: 104 MLRKNGEYAAAIPYYENYLAYAQ 126
>gi|86146496|ref|ZP_01064819.1| hypothetical protein MED222_12813 [Vibrio sp. MED222]
gi|85835759|gb|EAQ53894.1| hypothetical protein MED222_12813 [Vibrio sp. MED222]
Length = 260
Score = 39.8 bits (90), Expect = 0.44, Method: Composition-based stats.
Identities = 10/91 (10%), Positives = 27/91 (29%)
Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
F + + + + +Y D+ +A+ +L +
Sbjct: 170 FQKDFPDSTFTPNTHYWLGQLYFAKKQDKEAVKSFAAVVSYKDSNKRSDALVKLGDIATR 229
Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETLV 270
+A++ + YP A+ +T +
Sbjct: 230 NNNATQAKKYYQQVVTEYPNSASAKVAKTHL 260
Score = 36.3 bits (81), Expect = 4.1, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 28/79 (35%), Gaps = 3/79 (3%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
LK+ +Y AI FQ ++ D+ L + Y A EA + +
Sbjct: 147 YQNAVDMILKQRDYTGAIAAFQKFQKDFPDSTFTPNTHYWLGQLYFAKKQDKEAVKSFAA 206
Query: 253 IQERYPQGYWARYVETLVK 271
+ Y + + LVK
Sbjct: 207 VVS-YKDSN--KRSDALVK 222
>gi|323247654|gb|EGA31600.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
Length = 77
Score = 39.8 bits (90), Expect = 0.45, Method: Composition-based stats.
Identities = 15/74 (20%), Positives = 30/74 (40%)
Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
G+ +G+ A F V+ NY + A +AM ++ +A+ V + +
Sbjct: 1 GQLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMYKVGVIMQDKGDTAKAKAVYQQVINK 60
Query: 257 YPQGYWARYVETLV 270
YP A+ + +
Sbjct: 61 YPGTDGAKQAQKRL 74
>gi|294674052|ref|YP_003574668.1| lipoprotein [Prevotella ruminicola 23]
gi|294471674|gb|ADE81063.1| putative lipoprotein [Prevotella ruminicola 23]
Length = 275
Score = 39.8 bits (90), Expect = 0.45, Method: Composition-based stats.
Identities = 46/272 (16%), Positives = 75/272 (27%), Gaps = 28/272 (10%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
I + A L + + YE A F +A
Sbjct: 1 MNKGIITLACAALLLSSCASEFNSVYKYGDTDYK------YEYAKEAFACGKFQQATSLL 54
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
+ + A++ L M QY Y A+ ++Y T YP + Y+ VG S
Sbjct: 55 EELVTIKKGSDEAQECLYMLGMAQYGNLDYDAASETFKKYTTSYPRGTYAELAYFYVGQS 114
Query: 141 YAQMIRDVPYDQRATK---LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA------ 191
Q + DQ T Q + + P + + + Q
Sbjct: 115 LYQSAPEPRLDQSPTNGAITAYQQFMDLYPESSLRPQAQSRLYELHEKLIQKEYLSAELY 174
Query: 192 ---KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD---- 244
+ Y A I Q L NY E+ M +++A LA
Sbjct: 175 YNLGGYFGNINSNEESNYNACIITAQNCLKNYPYCSIREDLMLLIMKAKFELAENSSEEK 234
Query: 245 ------EAREVVSLIQERYPQGYWARYVETLV 270
+A + +P+ A E +
Sbjct: 235 RMDRYRDAEDECYGFLNEFPESKNAAMAEKFI 266
>gi|229094089|ref|ZP_04225173.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
cereus Rock3-42]
gi|229187222|ref|ZP_04314367.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
cereus BGSC 6E1]
gi|228596232|gb|EEK53907.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
cereus BGSC 6E1]
gi|228689301|gb|EEL43120.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
cereus Rock3-42]
Length = 273
Score = 39.8 bits (90), Expect = 0.45, Method: Composition-based stats.
Identities = 14/73 (19%), Positives = 25/73 (34%)
Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
+Q+ K LT S ++ L + + + L E+ EKA L+++
Sbjct: 1 MFQMKKLLLTALISTSIFGLAACGGKDNDEKKLVVGASNVPHAEILEKAKPLLEKKGIEL 60
Query: 76 AYEYFNQCSRDFP 88
E F
Sbjct: 61 KVEKFQDYVLPNK 73
>gi|218847941|ref|YP_002454729.1| hypothetical protein BCG9842_0063 [Bacillus cereus G9842]
gi|218546072|gb|ACK98465.1| hypothetical protein BCG9842_0063 [Bacillus cereus G9842]
Length = 328
Score = 39.8 bits (90), Expect = 0.45, Method: Composition-based stats.
Identities = 27/246 (10%), Positives = 64/246 (26%), Gaps = 22/246 (8%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFL---------- 68
+ + IF + F+ G Y D Q E KAV +
Sbjct: 1 MLRLKFVIFLLPLILFVSGCGNTKDETKY---EKDFLTQVEAISKAVSKMTKIQKGDQSL 57
Query: 69 --KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126
++ + +A + + F K + S +Y+ + S + ++
Sbjct: 58 TSSQKEYKEALMELKEVIKGFKELVPDSKYEYQQKQLIKSMDEYESSISKLLKGMSDTKG 117
Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
S+ D + + + V++ +
Sbjct: 118 SEWKDAIEQFNKATDMYVDAAGKIVDIRDGKTTGTSEEGVDKLSRQGDTATESETRAEPE 177
Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV-----EA--YVA 239
+ K + + + +A + E++ +L E Y +
Sbjct: 178 TTETQPSEQEKDTATKDTQTQTSEQVVKTEVAGTEEESTVEQSQQQLTVDKVKEIIEYYS 237
Query: 240 LALMDE 245
+ D+
Sbjct: 238 IGKDDK 243
>gi|156743163|ref|YP_001433292.1| hypothetical protein Rcas_3220 [Roseiflexus castenholzii DSM 13941]
gi|156234491|gb|ABU59274.1| Tetratricopeptide TPR_2 repeat protein [Roseiflexus castenholzii DSM
13941]
Length = 1178
Score = 39.8 bits (90), Expect = 0.45, Method: Composition-based stats.
Identities = 30/222 (13%), Positives = 63/222 (28%), Gaps = 5/222 (2%)
Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
D + ++ + A + Q + A L + F +
Sbjct: 953 ADPQSPDAFLWLGEARVRVGDVDDAISAYQQALQLRSAFPEALFGLAQAQFGAGRIDEAL 1012
Query: 112 QAASLGEEYITQYPESKNV-DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR--IVER 168
+ + E ++Y E+ + +Y G S + +L + R ++ R
Sbjct: 1013 RNVNRALEQRSRYAEAFLLLGKIYEQQGYSTRALDAYKQAVDANPRLAEPHFRRALLLIR 1072
Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
+ A +GR Y + + AA+ RF+ + + E
Sbjct: 1073 ADRLSEARDDLEIAARLEPNFAEAHYWLGRVYFAQRNFQAAVNRFREAVNRRNGN--YPE 1130
Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
A A L ++ A + + WA +
Sbjct: 1131 ARYYQGRAEEQLGDLNAAIRSFDTVANQNDDALWANEARAAL 1172
>gi|94969466|ref|YP_591514.1| TPR repeat-containing protein [Candidatus Koribacter versatilis
Ellin345]
gi|94551516|gb|ABF41440.1| Tetratricopeptide repeat protein [Candidatus Koribacter versatilis
Ellin345]
Length = 448
Score = 39.8 bits (90), Expect = 0.45, Method: Composition-based stats.
Identities = 21/243 (8%), Positives = 51/243 (20%), Gaps = 11/243 (4%)
Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
+ +F I V L + E+ + L ++++ A
Sbjct: 7 KFVSLPFLLFVLITVFTLA-----------EPKSPNANSAAELNKHGEELLAKRDYRGAV 55
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
+ F + A ++L V + + + + N
Sbjct: 56 KQFKKALTVQSDYEPAVRNLGTVMEVLGKDAESETDLQKAIRLAPEDAVAHNSLGRTLFH 115
Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
Y + + + A ++ +
Sbjct: 116 EGKYEDSAGSYRKAIEIHDDYAEAYNGLGAALLKLGKTDEAIGAFQSAASKDPKNVDALS 175
Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
A + + A + + A L +EA +
Sbjct: 176 NAGAALLHAQKAQDALPYLEKAKALKPDAPDVLENYANALQQLGRTNEAITEYEKALKGD 235
Query: 258 PQG 260
P+
Sbjct: 236 PKS 238
>gi|297692525|ref|XP_002823597.1| PREDICTED: transmembrane and TPR repeat-containing protein 2-like
[Pongo abelii]
Length = 836
Score = 39.8 bits (90), Expect = 0.45, Method: Composition-based stats.
Identities = 16/226 (7%), Positives = 47/226 (20%), Gaps = 10/226 (4%)
Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
++ +Y L+ ++ ++ +A + + + P +
Sbjct: 587 CSEIPDENLKDPHAHKSSVTSCLYNLGKLYHEQGHYEEALSVYKEAIQKMPRQFAPQSLY 646
Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL------VGMSYAQMIRDVPYD 151
M K +A E + + Y ++
Sbjct: 647 NMMGEAYMRLSKLPEAEHWYMESLRSKTDHIPAHLTYGKLLALTGRKSEAEKLFLKAIEL 706
Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
+ + + + + AA
Sbjct: 707 DPTKGNCYMHYGQFLLEEARLIEAAEMAKKAAELDSTEFDVVFNAAHMLRQASLNEAAEK 766
Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR-EVVSLIQER 256
+ L + A+ L + +A + +Q +
Sbjct: 767 YYDLAARLRPNYPA---ALMNLGAILHLNGRLQKAEANYLRALQLK 809
>gi|270263788|ref|ZP_06192057.1| hypothetical protein SOD_e04180 [Serratia odorifera 4Rx13]
gi|270042672|gb|EFA15767.1| hypothetical protein SOD_e04180 [Serratia odorifera 4Rx13]
Length = 74
Score = 39.8 bits (90), Expect = 0.45, Method: Composition-based stats.
Identities = 16/72 (22%), Positives = 34/72 (47%)
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
+ +G+ A F +V+ NY+ + A +AM ++ D+A+ V + ++YP
Sbjct: 1 MFYNKGKKDDAAYYFAVVVKNYAKSPKAPDAMYKVGIIMQEKGQADKAKAVFQQVIKQYP 60
Query: 259 QGYWARYVETLV 270
A+ ++ V
Sbjct: 61 TSAAAKQAKSRV 72
>gi|212703389|ref|ZP_03311517.1| hypothetical protein DESPIG_01432 [Desulfovibrio piger ATCC 29098]
gi|212673235|gb|EEB33718.1| hypothetical protein DESPIG_01432 [Desulfovibrio piger ATCC 29098]
Length = 161
Score = 39.8 bits (90), Expect = 0.45, Method: Composition-based stats.
Identities = 12/105 (11%), Positives = 35/105 (33%)
Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
+Y + + + + Y +R ++ A + V+ +S +
Sbjct: 54 RKYDEAQRSFADFMKNYPTHSMAPDAQYYLAECYFQRNQFPDAALAYDTVITKFSKSNRT 113
Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
A + + + A+ ++ + ++YP A + +K
Sbjct: 114 PGAYLKQGICFSKMNQKAAAKARMNELIKKYPNSPEAARAKNFLK 158
>gi|301384812|ref|ZP_07233230.1| tol-pal system protein YbgF [Pseudomonas syringae pv. tomato Max13]
gi|302063534|ref|ZP_07255075.1| tol-pal system protein YbgF [Pseudomonas syringae pv. tomato K40]
Length = 208
Score = 39.8 bits (90), Expect = 0.46, Method: Composition-based stats.
Identities = 16/111 (14%), Positives = 36/111 (32%), Gaps = 1/111 (0%)
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI-GRYYLKRGEYVAAIPRFQLVLANY 220
I + + F + A G L +G+ A F V Y
Sbjct: 96 FDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGDLQGAGQAFAKVSQQY 155
Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+++ +L + L D+ + ++ + +YP A+ + ++
Sbjct: 156 PKHAKVPDSLYKLADVERRLGHTDKVKGILQQVVAQYPGTSAAQLAQRDLQ 206
Score = 37.9 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 32/83 (38%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
D ++ YE A +K ++F KA + F R +P + A + V + G
Sbjct: 81 EPPDPAKEKLYYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGD 140
Query: 110 YQQAASLGEEYITQYPESKNVDY 132
Q A + QYP+ V
Sbjct: 141 LQGAGQAFAKVSQQYPKHAKVPD 163
Score = 37.5 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 14/67 (20%), Positives = 28/67 (41%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
E +K ++ A F L Y ++ +A A L E +A + A + +
Sbjct: 91 YYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGDLQGAGQAFAK 150
Query: 253 IQERYPQ 259
+ ++YP+
Sbjct: 151 VSQQYPK 157
>gi|298387954|ref|ZP_06997503.1| TPR domain-containing protein [Bacteroides sp. 1_1_14]
gi|298259361|gb|EFI02236.1| TPR domain-containing protein [Bacteroides sp. 1_1_14]
Length = 584
Score = 39.8 bits (90), Expect = 0.46, Method: Composition-based stats.
Identities = 25/255 (9%), Positives = 65/255 (25%), Gaps = 8/255 (3%)
Query: 20 YKFALTIFFSIAVCFLVGWE--RQSSRDVYLDSVTDVRYQRE------VYEKAVLFLKEQ 71
+I+ +AV LV + + + + + +A+ +++
Sbjct: 1 MNKKNSIWLLVAVWTLVSCGTVKSTREKPAVALAQSSLTPEQQRKYDYFFLEAMRLKEKK 60
Query: 72 NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
+++ A+ C P A A + + Q+A
Sbjct: 61 DYASAFGLLQHCLDIHPNAASALYEVSQYYMFLRQVPQGQEALEKAVANAPDNYWYSQGL 120
Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
Y + + + + +++ Y + ++
Sbjct: 121 ASLYQQQNELDKAVTLLEQMVVRFPAKQDPLFNLLDLYGRQEKYDEVISTLNRLEKRMGK 180
Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
E + + FQ + + + L + Y+ EA +V
Sbjct: 181 NEQLSMEKFRIYLQMKDDKKAFQEIESLVQEYPMDMRYQVILGDVYLQNGKKQEAYDVYQ 240
Query: 252 LIQERYPQGYWARYV 266
+ P A +
Sbjct: 241 KVLAAEPDNPMAIFS 255
>gi|294508725|ref|YP_003572784.1| Conserved hypothetical protein containing TPR domain [Salinibacter
ruber M8]
gi|294345055|emb|CBH25833.1| Conserved hypothetical protein containing TPR domain [Salinibacter
ruber M8]
Length = 554
Score = 39.8 bits (90), Expect = 0.46, Method: Composition-based stats.
Identities = 19/199 (9%), Positives = 48/199 (24%)
Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
+ Y + + + A E + + +L ++ Q +
Sbjct: 323 DEFASAYYNRGNAEANQGDLEAAVESYERVLELEGPDAATYYNLALAYEEQGDLRAARTY 382
Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
+ + YPE+ + + + Y + ++ + +
Sbjct: 383 YEKTLDLKSNYPEAWYGLGCCFDTDERPEEALECFRYAVNLDANVPKFWTARADCAYKVG 442
Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
+ A + E Y E + + R
Sbjct: 443 KLDEALESYQHAVRLDESNEHAWTGYAETLLEKEQPEEALEAYRQALELDPKSANTYFRQ 502
Query: 234 VEAYVALALMDEAREVVSL 252
+A +AL DE+ +
Sbjct: 503 AKALLALGRADESIRALKT 521
>gi|253568782|ref|ZP_04846192.1| TPR domain-containing protein [Bacteroides sp. 1_1_6]
gi|251840801|gb|EES68882.1| TPR domain-containing protein [Bacteroides sp. 1_1_6]
Length = 584
Score = 39.8 bits (90), Expect = 0.46, Method: Composition-based stats.
Identities = 25/255 (9%), Positives = 65/255 (25%), Gaps = 8/255 (3%)
Query: 20 YKFALTIFFSIAVCFLVGWE--RQSSRDVYLDSVTDVRYQRE------VYEKAVLFLKEQ 71
+I+ +AV LV + + + + + +A+ +++
Sbjct: 1 MNKKNSIWLLVAVWTLVSCGTVKSTREKPAVALAQSSLTPEQQRKYDYFFLEAMRLKEKK 60
Query: 72 NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
+++ A+ C P A A + + Q+A
Sbjct: 61 DYASAFGLLQHCLDIHPNAASALYEVSQYYMFLRQVPQGQEALEKAVANAPDNYWYSQGL 120
Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
Y + + + + +++ Y + ++
Sbjct: 121 ASLYQQQNELDKAVTLLEQMVVRFPAKQDPLFNLLDLYGRQEKYDEVISTLNRLEKRMGK 180
Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
E + + FQ + + + L + Y+ EA +V
Sbjct: 181 NEQLSMEKFRIYLQMKDDKKAFQEIESLVQEYPMDMRYQVILGDVYLQNGKKQEAYDVYQ 240
Query: 252 LIQERYPQGYWARYV 266
+ P A +
Sbjct: 241 KVLAAEPDNPMAIFS 255
>gi|228917613|ref|ZP_04081156.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
thuringiensis serovar pulsiensis BGSC 4CC1]
gi|228842037|gb|EEM87141.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
thuringiensis serovar pulsiensis BGSC 4CC1]
Length = 273
Score = 39.8 bits (90), Expect = 0.46, Method: Composition-based stats.
Identities = 13/73 (17%), Positives = 25/73 (34%)
Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
+Q+ K LT S ++ L + + + L E+ EKA L+++
Sbjct: 1 MFQMKKLLLTALISTSIFGLAACGGKDNDEKKLVVGASNVPHAEILEKAKPLLEKKGIEL 60
Query: 76 AYEYFNQCSRDFP 88
+ F
Sbjct: 61 EVKKFQDYVLPNK 73
>gi|225024693|ref|ZP_03713885.1| hypothetical protein EIKCOROL_01575 [Eikenella corrodens ATCC
23834]
gi|224942582|gb|EEG23791.1| hypothetical protein EIKCOROL_01575 [Eikenella corrodens ATCC
23834]
Length = 257
Score = 39.8 bits (90), Expect = 0.46, Method: Composition-based stats.
Identities = 19/254 (7%), Positives = 53/254 (20%), Gaps = 13/254 (5%)
Query: 21 KFALTIFFSIAVCFLVGWER---QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
I + L G + + ++ + + A+ ++ ++ A
Sbjct: 1 MKKSLIASLTTLALLAGCGGITIHTGNKEVRNRPEEIAAIKT--QLAIEYMNSHDYRAAV 58
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI------TQYPESKNVD 131
+ + P A K +++ +
Sbjct: 59 SAIEEALQAQPRNENAWLVRAEIYQYLKVPDKAEESFQRALAIKPDSAEINNNYGWFLCN 118
Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
+ ++ R A
Sbjct: 119 SGGRANQALAYFDRALADPTYPSPQVAYMNKGICSARLGQYNLAMAYLERSQAADPSFAP 178
Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
+ E+ R + G A +F+ + + + + A E +
Sbjct: 179 AQKEMARVRMMEGNLGEADRQFRQYQSKVDRLSADD--LLLGWKIARTRGQTQAAYEYEA 236
Query: 252 LIQERYPQGYWARY 265
++ YP +
Sbjct: 237 QLRTNYPYSPELQE 250
>gi|317009958|gb|ADU80538.1| putative paralysed flagella protein PflA; putative signal peptide
[Helicobacter pylori India7]
Length = 803
Score = 39.8 bits (90), Expect = 0.46, Method: Composition-based stats.
Identities = 26/205 (12%), Positives = 54/205 (26%), Gaps = 17/205 (8%)
Query: 70 EQNFSKAYEYFNQ----CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP 125
++++ KA F + L + + I Q
Sbjct: 123 DRDYKKAIPLFVENDPKAKMWQIIGYDQNIPFLSEKDHAQQGLNFPIVIKDAQTPIIQEL 182
Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
+ N + A + +A L+ +SR + Y + + K +
Sbjct: 183 DVDNKPLLTTKGYDLNAYLEAKKQIHSQAYFDALRTISRAFKNYPQTIFKKDLYLLEIIA 242
Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
QL K+ + K + NY + E + + +A +
Sbjct: 243 LGQLGIKKSLLIDIGTK-------------WIKNYPTDPNIPEVLYYVAKALDENNNYKQ 289
Query: 246 AREVVSLIQERYPQGYWARYVETLV 270
A I Y +A + +
Sbjct: 290 AMRYYKRILLEYQNSRYAPLAQMRL 314
>gi|317154824|ref|YP_004122872.1| tetratricopeptide domain-containing protein [Desulfovibrio
aespoeensis Aspo-2]
gi|316945075|gb|ADU64126.1| tetratricopeptide TPR_2 repeat protein [Desulfovibrio aespoeensis
Aspo-2]
Length = 585
Score = 39.8 bits (90), Expect = 0.46, Method: Composition-based stats.
Identities = 23/228 (10%), Positives = 56/228 (24%), Gaps = 4/228 (1%)
Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
D D R +Y A + ++++ A+
Sbjct: 191 DALKKIPADQRSPDALYAMGRAQGNLGMRKAAIATLKKAVAM---DETFTEAMVELAYQY 247
Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
+ A + Q + + + R + + +
Sbjct: 248 ELSKDLVAAEKTYARIMDQGDQFPEARLRVINLNLKLNNPGRALDVALNGPQSKSFVLDA 307
Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
++ + Y +G+ + + E + + + D
Sbjct: 308 VLMFINDGFYAQGSTVLDMLTSDGEVPAEYFFYKAVIANEGENDPKKALTFLDKVNEDDR 367
Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ-GYWARYVETLVK 271
A+ + Y AL DEA + +E +P + L++
Sbjct: 368 LYPHALRFKAQLYNALGKGDEALAITRKGKELFPDATTFYILESALLR 415
>gi|83814061|ref|YP_446792.1| TPR repeat-containing protein [Salinibacter ruber DSM 13855]
gi|83755455|gb|ABC43568.1| TPR repeat protein [Salinibacter ruber DSM 13855]
Length = 554
Score = 39.8 bits (90), Expect = 0.46, Method: Composition-based stats.
Identities = 19/199 (9%), Positives = 48/199 (24%)
Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
+ Y + + + A E + + +L ++ Q +
Sbjct: 323 DEFASAYYNRGNAEANQGDLEAAVESYERVLELEGPDAATYYNLALAYEEQGDLRAARTY 382
Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
+ + YPE+ + + + Y + ++ + +
Sbjct: 383 YEKTLDLKSNYPEAWYGLGCCFDTDERPEEALECFRYAVNLDANVPKFWTARADCAYKVG 442
Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
+ A + E Y E + + R
Sbjct: 443 KLDEALESYQHAVRLDESNEHAWTGYAETLLEKEQPEEALEAYRQALELDPKSANTYFRQ 502
Query: 234 VEAYVALALMDEAREVVSL 252
+A +AL DE+ +
Sbjct: 503 AKALLALGRADESIRALKT 521
>gi|70732081|ref|YP_261837.1| hypothetical protein PFL_4756 [Pseudomonas fluorescens Pf-5]
gi|68346380|gb|AAY93986.1| conserved hypothetical protein [Pseudomonas fluorescens Pf-5]
Length = 270
Score = 39.8 bits (90), Expect = 0.46, Method: Composition-based stats.
Identities = 17/111 (15%), Positives = 37/111 (33%), Gaps = 1/111 (0%)
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI-GRYYLKRGEYVAAIPRFQLVLANY 220
I + + + F +Q A G L +G+ A F V Y
Sbjct: 158 FDLIKAKDFDKASQAFSAFLRKYPNSQYAGNAQYWLGEVNLAKGDLQGAGQAFAKVSQLY 217
Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+++ +L + L D + ++ + +YP A+ + ++
Sbjct: 218 PKHAKVPDSLYKLADVERRLGHTDRVKGILQQVVAQYPGTSAAQLAQRDLQ 268
Score = 37.9 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 32/83 (38%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
D ++ Y+ A +K ++F KA + F+ R +P + A + V + G
Sbjct: 143 EPGDPAKEKLYYDAAFDLIKAKDFDKASQAFSAFLRKYPNSQYAGNAQYWLGEVNLAKGD 202
Query: 110 YQQAASLGEEYITQYPESKNVDY 132
Q A + YP+ V
Sbjct: 203 LQGAGQAFAKVSQLYPKHAKVPD 225
Score = 37.1 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 13/67 (19%), Positives = 28/67 (41%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ +K ++ A F L Y ++++A A L E +A + A + +
Sbjct: 153 YYDAAFDLIKAKDFDKASQAFSAFLRKYPNSQYAGNAQYWLGEVNLAKGDLQGAGQAFAK 212
Query: 253 IQERYPQ 259
+ + YP+
Sbjct: 213 VSQLYPK 219
>gi|322379672|ref|ZP_08053990.1| paralysed flagella protein [Helicobacter suis HS5]
gi|321147908|gb|EFX42490.1| paralysed flagella protein [Helicobacter suis HS5]
Length = 768
Score = 39.8 bits (90), Expect = 0.46, Method: Composition-based stats.
Identities = 20/145 (13%), Positives = 44/145 (30%), Gaps = 13/145 (8%)
Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
+ N ++ + D L+ + I++ Y ++ + K FY
Sbjct: 151 DVDNQPIMHAKDQGLGEYLNTKRLIDNGYYMEALESIVNILKLYPDTLFRKDLYFYEITA 210
Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
+ L K+ + + + Y + L AY + M +
Sbjct: 211 LSHLKKKQDLVIQVAS-------------QWIKLYPSDPQVPSVLYALGNAYSQINYMPQ 257
Query: 246 AREVVSLIQERYPQGYWARYVETLV 270
A I E YP+ ++ + +
Sbjct: 258 AASTFKRIIEEYPKSRYSPLSQMRL 282
>gi|237748797|ref|ZP_04579277.1| tol-Pal cell envelope complex subunit YbgF [Oxalobacter formigenes
OXCC13]
gi|229380159|gb|EEO30250.1| tol-Pal cell envelope complex subunit YbgF [Oxalobacter formigenes
OXCC13]
Length = 244
Score = 39.8 bits (90), Expect = 0.46, Method: Composition-based stats.
Identities = 16/118 (13%), Positives = 31/118 (26%)
Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
+ + + + R + + K G+Y
Sbjct: 83 NQVKTMEERQKDFYLDLDTRLKKLEPREATAAAKESTADSNENAAYATAEDKFKAGDYKG 142
Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
A+ + L Y + A +L AY A + S + +RYP+
Sbjct: 143 AVSAYNSFLKQYPKSNLIASAQYQLGNAYYLQGDYKNALKQQSAVVKRYPKNQVTPDA 200
Score = 39.4 bits (89), Expect = 0.60, Method: Composition-based stats.
Identities = 17/95 (17%), Positives = 42/95 (44%)
Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
+ N +A+ + ++G Y +G+Y A+ + V+ Y + +AM +
Sbjct: 147 YNSFLKQYPKSNLIASAQYQLGNAYYLQGDYKNALKQQSAVVKRYPKNQVTPDAMLNMAS 206
Query: 236 AYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
+ L + A++ +S + +YP+ A+ + +
Sbjct: 207 CQIGLNDIAGAKKTLSELARKYPKSGAAKKAKERL 241
Score = 37.9 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 15/113 (13%), Positives = 36/113 (31%)
Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
T + Y A K ++ A +N + +P + + + Y G
Sbjct: 116 KESTADSNENAAYATAEDKFKAGDYKGAVSAYNSFLKQYPKSNLIASAQYQLGNAYYLQG 175
Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
Y+ A + +YP+++ + + + ++L +Y
Sbjct: 176 DYKNALKQQSAVVKRYPKNQVTPDAMLNMASCQIGLNDIAGAKKTLSELARKY 228
>gi|225620398|ref|YP_002721655.1| hypothetical protein BHWA1_01479 [Brachyspira hyodysenteriae WA1]
gi|225215217|gb|ACN83951.1| hypothetical protein BHWA1_01479 [Brachyspira hyodysenteriae WA1]
Length = 223
Score = 39.8 bits (90), Expect = 0.46, Method: Composition-based stats.
Identities = 20/223 (8%), Positives = 54/223 (24%), Gaps = 22/223 (9%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQ-----------SSRDVYLDSVTDVRYQREVYEKAVLF 67
+ K + F+++ ++ + + + D EV A
Sbjct: 1 MKKNIILFIFAVSSLLIISCSAKDVTLRRIEDVHKAEQKLAKNPDDEETILEVLNAAQNG 60
Query: 68 LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127
+E ++A + D ++ R S+ F +
Sbjct: 61 GREVR-AEAIWVLGKIEADIAYSDFLRASVEDPDFNVRCLA--------VLGLGKLEANN 111
Query: 128 KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
++ + ++ I++ ++ +
Sbjct: 112 PEAIDRIKRAISDTDLQVQIEGLKVAGRINAKELLNSILDSLSSKNKWVRMAAVEALKDY 171
Query: 188 QLAA--KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
A + + + K + I + N + AEE
Sbjct: 172 DDARVDRSLNLLASTDKDYAVRSTINQVIEYRKNKKNTPAAEE 214
>gi|166363119|ref|YP_001655392.1| TPR repeat-containing protein [Microcystis aeruginosa NIES-843]
gi|166085492|dbj|BAG00200.1| tetratricopeptide repeat protein [Microcystis aeruginosa NIES-843]
Length = 1379
Score = 39.8 bits (90), Expect = 0.46, Method: Composition-based stats.
Identities = 31/226 (13%), Positives = 51/226 (22%), Gaps = 7/226 (3%)
Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
D + Y K + + A E Q P + Q
Sbjct: 568 DEAIKQNDPKNVYLAWYGKGLALGYLGKYQTAIEALQQAINTLPKREDLKNFHSSILQKQ 627
Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ--YM 162
+Y + I Q + +Y ++ A +
Sbjct: 628 SVVYRYLENYEQALTVINQAISLFPNNPNHYNEKYVVLSQLKRYDEGLAAITQAIDLAPR 687
Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
+ N Y N+ Y RG + +++L LA+YS
Sbjct: 688 AAWYGNRGNLYYNLQKYDLALSDWNKAIKINPNYANAYNNRGNLYSDQKKYELALADYSK 747
Query: 223 A----EHAEEAMARLVEAYVALALMDEAR-EVVSLIQERYPQGYWA 263
A + A Y L D A + I
Sbjct: 748 AIDINPNDAVAYYNRGNLYYNLQKYDLALSDYSKAIDINPNDAKAY 793
>gi|297474370|ref|XP_002687226.1| PREDICTED: transmembrane and tetratricopeptide repeat containing
2-like [Bos taurus]
gi|296487987|gb|DAA30100.1| transmembrane and tetratricopeptide repeat containing 2-like [Bos
taurus]
Length = 836
Score = 39.8 bits (90), Expect = 0.46, Method: Composition-based stats.
Identities = 20/225 (8%), Positives = 55/225 (24%), Gaps = 8/225 (3%)
Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
++ +Y L+ ++ ++ A + + + P +
Sbjct: 587 CSEIPDENLKDPHAHKSSVTSCLYNLGKLYHEQGHYEDALSVYKEAIQKMPRQFAPQSLY 646
Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
M +A E + + Y + + + +A +
Sbjct: 647 NMMGEAYMRLSMLPEAEHWYMESLRSKTDHIPAHLTYGKLLALTGRKSEAEKFFLKAIE- 705
Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
L + ++ AR + AA+ + ++
Sbjct: 706 -LDPTKGNCYMHYGQFLLEEARLIEAAEMAKKAAELDSTEFDVVFNAAHMLRQASLNEAA 764
Query: 218 ANYSD-----AEHAEEAMARLVEAYVALALMDEAR-EVVSLIQER 256
Y D + A+ L + +A + +Q +
Sbjct: 765 EKYYDLAARLRPNYPAALMNLGAILHLNGRLQKAEANYLRALQLK 809
>gi|326431071|gb|EGD76641.1| tetratricopeptide protein [Salpingoeca sp. ATCC 50818]
Length = 753
Score = 39.8 bits (90), Expect = 0.47, Method: Composition-based stats.
Identities = 17/221 (7%), Positives = 45/221 (20%), Gaps = 13/221 (5%)
Query: 50 SVTDVRYQREVYEK-AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
+Y + + + KA ++ + + + A
Sbjct: 206 EGEKGGNVAALYNNLGIANYSKGKYEKAIAFYEKALAITVEVLGEKHPSTADTYNSLGAA 265
Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM-LQYMSRIVE 167
+ + + + ++ + + +
Sbjct: 266 YHSKGEYAKAIQQYENALAIRLETLGKKHPKTADIYNNLSAAYHSKGEYATAIQQYENAL 325
Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
+ N + E A R + + +S
Sbjct: 326 AIRLETLGEKHPNTADTYNNLGSVYSSEGQYDKAIHFHEKALAIRVETLGEKHSRTAS-- 383
Query: 228 EAMARLVEAYVALALMDEARE--------VVSLIQERYPQG 260
A L AY D+A ++ E++P
Sbjct: 384 -AYLGLGLAYQRKGDYDKAIHFHEKDLAITAEVLGEKHPST 423
>gi|260683652|ref|YP_003214937.1| putative lipoprotein [Clostridium difficile CD196]
gi|260687312|ref|YP_003218446.1| putative lipoprotein [Clostridium difficile R20291]
gi|260209815|emb|CBA63669.1| putative lipoprotein [Clostridium difficile CD196]
gi|260213329|emb|CBE04910.1| putative lipoprotein [Clostridium difficile R20291]
Length = 225
Score = 39.8 bits (90), Expect = 0.47, Method: Composition-based stats.
Identities = 15/97 (15%), Positives = 31/97 (31%), Gaps = 12/97 (12%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
L + + + SI FLVG ++ L + +L++ N+ KA E
Sbjct: 6 LMRGRVILLISILSIFLVGCSFNKKDEINLVE------------QGKTYLEKHNYKKAME 53
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
+ + AR + + + +
Sbjct: 54 SLSSALEEDSTNENARAMYMQAMRMSNMTEFEELKNY 90
>gi|325263638|ref|ZP_08130372.1| putative tetratricopeptide repeat [Clostridium sp. D5]
gi|324031347|gb|EGB92628.1| putative tetratricopeptide repeat [Clostridium sp. D5]
Length = 474
Score = 39.8 bits (90), Expect = 0.47, Method: Composition-based stats.
Identities = 10/42 (23%), Positives = 18/42 (42%)
Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
A+ L AY+ D A + + + E YP A+ + +
Sbjct: 392 ALLNLGIAYMRNGDNDNASKYLKRVIELYPDTERAQEAQNSL 433
>gi|19115532|ref|NP_594620.1| RNA polymerase II associated Paf1 complex subunit Tpr1
[Schizosaccharomyces pombe 972h-]
gi|26400735|sp|O42668|TPR1_SCHPO RecName: Full=Tetratricopeptide repeat protein 1
gi|2664248|emb|CAA15833.1| RNA polymerase II associated Paf1 complex subunit Tpr1
[Schizosaccharomyces pombe]
Length = 1039
Score = 39.8 bits (90), Expect = 0.47, Method: Composition-based stats.
Identities = 25/189 (13%), Positives = 50/189 (26%), Gaps = 19/189 (10%)
Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
KA + + N+ A + + + P + ++ A S
Sbjct: 181 KARILYAKGNYRSALKLYQRALVSNPQ--FKPDPRIGIGLCFWNLDMKTDALSAWTRVQQ 238
Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
P++ VD L A + + LQ++
Sbjct: 239 LDPKNTVVDTYIGLYYYDLAFQNVNNDSFVQNYGKALQHI-----------------QRA 281
Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242
RN + RY + Y I + V+ N + + + AY +
Sbjct: 282 FKTRNNDPVASSILERYVYSKKNYEGCIKLAENVIQNSFSSSLIADGYYWMGRAYHQMGN 341
Query: 243 MDEAREVVS 251
++A
Sbjct: 342 NEKAMASYQ 350
>gi|39996216|ref|NP_952167.1| TPR domain protein [Geobacter sulfurreducens PCA]
gi|39982981|gb|AAR34440.1| TPR domain protein [Geobacter sulfurreducens PCA]
Length = 299
Score = 39.4 bits (89), Expect = 0.48, Method: Composition-based stats.
Identities = 31/255 (12%), Positives = 63/255 (24%), Gaps = 18/255 (7%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
+F + + + Y+ + L E + ++A F
Sbjct: 54 RFTRILP-MVLCFLVAACAAND---------ASRNQASYHYQMGLSHLGENDTTRALIEF 103
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
+ + P + SL ++ F + + Y +++N V YL
Sbjct: 104 IEAEKITPDDPILLNSLGLAYFYKKRFDLAELKFRKAISLKPDYSDARNNLGVNYLEMQR 163
Query: 141 YAQMIRDVPYDQR-----ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
+ I + + + P + V
Sbjct: 164 WDDAISQFKLVMADILFLNQEDARINLGLAYLGKGDLPQALETLRASVSHNPRNLIARVA 223
Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
IGR Y AI ++ + + + A L A+V A +
Sbjct: 224 IGRVYFAMDRAEMAIQEYRKAIEINKNY---QNAHYYLALAHVKQKDYVAAADAFREAIR 280
Query: 256 RYPQGYWARYVETLV 270
P R +
Sbjct: 281 IAPDSEKGRLSREYL 295
>gi|301769227|ref|XP_002920031.1| PREDICTED: transmembrane and TPR repeat-containing protein 2-like
[Ailuropoda melanoleuca]
Length = 836
Score = 39.4 bits (89), Expect = 0.48, Method: Composition-based stats.
Identities = 17/226 (7%), Positives = 50/226 (22%), Gaps = 10/226 (4%)
Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
++ +Y L+ ++ ++ A + + + P +
Sbjct: 587 CSEIPDENLKDPHAHKSSVTSCLYNLGKLYHEQGHYEDALSVYKEAIQKMPRQFAPQSLY 646
Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK- 156
M K +A E + + Y + + + +A +
Sbjct: 647 NMMGEAYMRLSKLPEAEHWYMESLRSKTDHIPAHLTYGKLLALTGRKSEAEKFFLKAIEL 706
Query: 157 -----LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
+ + + + + AA
Sbjct: 707 DPTKGNCYMHYGQFLLEEARLIEAAEMAKKAAELDSTEFDVVFSAAHMLRQASLNEAAEK 766
Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR-EVVSLIQER 256
+ L + A+ L + +A + +Q +
Sbjct: 767 YYDLAARLRPNYPA---ALMNLGAILHLNGRLQKAEANYLRALQLK 809
>gi|283779975|ref|YP_003370730.1| TPR repeat-containing protein [Pirellula staleyi DSM 6068]
gi|283438428|gb|ADB16870.1| TPR repeat-containing protein [Pirellula staleyi DSM 6068]
Length = 324
Score = 39.4 bits (89), Expect = 0.48, Method: Composition-based stats.
Identities = 20/240 (8%), Positives = 56/240 (23%), Gaps = 11/240 (4%)
Query: 28 FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87
+ + ++ + RE+ + + + +A +++ +
Sbjct: 29 LLVTLIAVICCSSGCRALRCRQPDEQISAARELSIRGTDAQRRGQWDRAEQFYASAVQQC 88
Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147
P AR ++ A E + S + + +
Sbjct: 89 PADERAR----CGLAESLWQRGNREQAVAHMEQAVRLSGSDPLRRIQLGQMYLSVGQLPR 144
Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG-------RYY 200
++ + + ++ A + Y
Sbjct: 145 ALEQADLAIEANGSLAAAWALRGDVFKQEARYNEALASYHRALAHQAHYPDVQLAVADVY 204
Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
K+ + A+ Q + Y + + R L +A + + PQ
Sbjct: 205 QKQDRQLRALSTVQQLADQYPPGQTPPLVLYREALVLKDLKRYTDAANSLLAASRQDPQS 264
>gi|302840537|ref|XP_002951824.1| hypothetical protein VOLCADRAFT_81612 [Volvox carteri f.
nagariensis]
gi|300263072|gb|EFJ47275.1| hypothetical protein VOLCADRAFT_81612 [Volvox carteri f.
nagariensis]
Length = 650
Score = 39.4 bits (89), Expect = 0.48, Method: Composition-based stats.
Identities = 13/91 (14%), Positives = 30/91 (32%)
Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
++ R + ++ +K ++ AI Q L + + A++ L Y
Sbjct: 1 MAYFQQPQRPIADGQYTQVIYTLIKDQKFTEAISHLQYQLQARGNIPESRAALSLLGYCY 60
Query: 238 VALALMDEAREVVSLIQERYPQGYWARYVET 268
D A ++ + YP + +
Sbjct: 61 YYTGQYDLASQMYEQLVTLYPNNEDYKLYYS 91
>gi|260808191|ref|XP_002598891.1| hypothetical protein BRAFLDRAFT_90083 [Branchiostoma floridae]
gi|229284166|gb|EEN54903.1| hypothetical protein BRAFLDRAFT_90083 [Branchiostoma floridae]
Length = 1173
Score = 39.4 bits (89), Expect = 0.48, Method: Composition-based stats.
Identities = 23/219 (10%), Positives = 53/219 (24%), Gaps = 6/219 (2%)
Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
+ +Y D+ + K + KA YF Q +
Sbjct: 907 SLSMKKTIYGDNTAHPDIAESLNNLGSSLSKLGDHKKAIGYFQQSLSTRKTIYGDNTAHP 966
Query: 99 MSAFV------QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
A ++ + A + ++ D + +
Sbjct: 967 DIAQSLNNLGSSWTQLGDHRKAISYYQQSLSMKKTIYGDNTAHPDIAESLNNLGSSLSKL 1026
Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
K + Y + + A + N L + E+G Y ++
Sbjct: 1027 GDHKKAIGYFQQSLSTRKTIYGDNTAHPDIAQSLNNLGSSWSELGDNRKAISYYQQSLSM 1086
Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
+ + + + E++ L + L +A
Sbjct: 1087 KKTIYGDNTAHPDIAESLNNLGSSLSKLGDHKKAIGYFE 1125
>gi|170078757|ref|YP_001735395.1| TPR domain-containing protein [Synechococcus sp. PCC 7002]
gi|169886426|gb|ACB00140.1| TPR domain containing protein [Synechococcus sp. PCC 7002]
Length = 288
Score = 39.4 bits (89), Expect = 0.49, Method: Composition-based stats.
Identities = 20/234 (8%), Positives = 45/234 (19%), Gaps = 16/234 (6%)
Query: 28 FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87
+ L+G ++ + + Y V L + NF A F+
Sbjct: 22 ILLGTVLLLGSGTPGLSQTAPETSNNAANAIQRYNAGVDALTQGNFEGAIAEFSAAIN-L 80
Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147
+ ++ + + + Y + +
Sbjct: 81 DESDPDAYYNRGYSYHVLGEYQAAYDDYSQAIQLKPEFADAYGNRCYAAYLLDNYEQAIA 140
Query: 148 VPYDQRATKLMLQYMSRIVERYTN---------------SPYVKGARFYVTVGRNQLAAK 192
K + + Y A
Sbjct: 141 DCDQAIILKNNNPDFFINRGNAYDDLALQARNANQTELANGYHAKAIADYNAALTLRPNY 200
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
L + Q A+ + EA + L +++A
Sbjct: 201 FKAYYNRALAHNRFENHTAALQDYTASITGNPEFAEAYYNRAITHYKLDNLEQA 254
>gi|218961725|ref|YP_001741500.1| hypothetical protein; putative signal peptide [Candidatus
Cloacamonas acidaminovorans]
gi|167730382|emb|CAO81294.1| hypothetical protein; putative signal peptide [Candidatus
Cloacamonas acidaminovorans]
Length = 552
Score = 39.4 bits (89), Expect = 0.49, Method: Composition-based stats.
Identities = 22/218 (10%), Positives = 54/218 (24%), Gaps = 6/218 (2%)
Query: 55 RYQREVYEKAVLFLKEQNFSKAYE--YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
++Y A+ N+++A + F + +
Sbjct: 173 NEVNKIYNIALNNYANGNYAEAEKNLVFALGLNPDLKDAYYYLGSVYYKQGKLEQAIQNL 232
Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
+L + + +D + + + + ++ + N
Sbjct: 233 ELNLEKNPQHTQTLAILIDIYEKTNQTNKRLNAMEKLATINENEELWLTIANLYSEQNNI 292
Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232
+ A + + + AIP + + Y + E R
Sbjct: 293 AKAEEALQKALELNPNYIEAKTRLAFLLYDHNRFEEAIPYLEAIFDKYPENELVST---R 349
Query: 233 LVEAYVALALMDEA-REVVSLIQERYPQGYWARYVETL 269
L AY +D+A + + I+ L
Sbjct: 350 LANAYQKANRLDDAIAKYENTIKNNPQNTMAYLSAVNL 387
>gi|110636602|ref|YP_676809.1| TPR repeat-containing gliding mobility protein [Cytophaga
hutchinsonii ATCC 33406]
gi|110279283|gb|ABG57469.1| gliding motility-related protein; TPR repeat-containing protein
[Cytophaga hutchinsonii ATCC 33406]
Length = 794
Score = 39.4 bits (89), Expect = 0.49, Method: Composition-based stats.
Identities = 12/72 (16%), Positives = 27/72 (37%), Gaps = 1/72 (1%)
Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
Y K E AI ++ +L Y ++++ E + L Y + + +
Sbjct: 587 SIYNHKLDEPQRAIRTYENILKRYPESKYVPEVLYNLYLIYKEQDNNKQ-EVYKARLLNE 645
Query: 257 YPQGYWARYVET 268
+P +A+ +
Sbjct: 646 HPNSIFAKLIRN 657
>gi|118362625|ref|XP_001014539.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89296306|gb|EAR94294.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 606
Score = 39.4 bits (89), Expect = 0.49, Method: Composition-based stats.
Identities = 29/215 (13%), Positives = 58/215 (26%), Gaps = 4/215 (1%)
Query: 41 QSSRDVYLDSVTDVRYQREVYEK-AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99
+ ++ + + YE+ ++L+ F A F P + A L +
Sbjct: 27 KQKEQAFVKILQTNPQSYQTYEELGNVYLEMGQFENAKNSFYSALEINPQSARAYCGLGI 86
Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM---IRDVPYDQRATK 156
Q + +Q E + + + + Y ++ Q + +
Sbjct: 87 ICSEQNMIKESEQYFQKSLELNPKSAITLSNLGILYDKCVTIDQRIFCYKQAIESDPSIH 146
Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
+ K Q + Y Y I +
Sbjct: 147 QSYNGLGLAYLDKQMYGNAKQLFQKCLEVNPQNINAHFNLATIYRSENNYQDCINCLETC 206
Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
L Y + L EAY L +M+EA + +
Sbjct: 207 LKIYPQNDAPFSIYYNLGEAYQQLGMMEEAIKYLK 241
>gi|71281931|ref|YP_268471.1| TPR domain-containing protein [Colwellia psychrerythraea 34H]
gi|71147671|gb|AAZ28144.1| TPR domain protein [Colwellia psychrerythraea 34H]
Length = 263
Score = 39.4 bits (89), Expect = 0.49, Method: Composition-based stats.
Identities = 17/120 (14%), Positives = 41/120 (34%), Gaps = 14/120 (11%)
Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
+ + + + + NS Y A +++ G+ +GE A
Sbjct: 153 KDKRYQQAIVEFRAFNKSFPNSSYAPNAHYWL--------------GQLLFNQGELAQAE 198
Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
F +V+ + D+ +A+ +L +A + + YP+ A+ + +
Sbjct: 199 QEFLIVVNKHKDSTKRPDALLKLAMVAQKQNNAKKAISTYQQLIKEYPESTAAKLGKPRL 258
Score = 39.4 bits (89), Expect = 0.60, Method: Composition-based stats.
Identities = 12/79 (15%), Positives = 29/79 (36%), Gaps = 2/79 (2%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
LK Y AI F+ ++ ++ +A A L + + +A + +
Sbjct: 144 YDHALNLVLKDKRYQQAIVEFRAFNKSFPNSSYAPNAHYWLGQLLFNQGELAQAEQEFLI 203
Query: 253 IQERYPQGYWARYVETLVK 271
+ ++ + + L+K
Sbjct: 204 VVNKHKDS--TKRPDALLK 220
>gi|332140114|ref|YP_004425852.1| TPR domain protein [Alteromonas macleodii str. 'Deep ecotype']
gi|327550136|gb|AEA96854.1| TPR domain protein [Alteromonas macleodii str. 'Deep ecotype']
Length = 924
Score = 39.4 bits (89), Expect = 0.49, Method: Composition-based stats.
Identities = 28/255 (10%), Positives = 67/255 (26%), Gaps = 18/255 (7%)
Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
+L K T+ + L G +S D A ++ +Q A
Sbjct: 8 KLIKRT-TLAVMLTSALLSGCSEKSMESHLAD--------------ARNYVSQQQVDAAI 52
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
+ + P A R L + + ++ + E + + V Y
Sbjct: 53 VEYKNAIQKGPNAAEPRFELGKLYLQKNNFAAAEKELNKAMELGYPVSQVIPLLSVAYQQ 112
Query: 138 GMSYAQMIRDVPYDQRAT--KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
+ + + T + ++ + A+ + + +
Sbjct: 113 SGAENALAEVDYRAEGMTAVESAEVGFYKLQALMQ-LGKTEEAQTLIADLSTLDTSSVYK 171
Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
A A ++ + +L + Y+ +A EV +
Sbjct: 172 GLIDSYTFVLDNDMEGALAATEALREQAPTNKDVLQQLAKIYLQSGEPAKAAEVYGVYVS 231
Query: 256 RYPQGYWARYVETLV 270
YP +++ +
Sbjct: 232 HYPDDVTSKFAYASL 246
>gi|296212478|ref|XP_002752849.1| PREDICTED: transmembrane and TPR repeat-containing protein 2
[Callithrix jacchus]
Length = 591
Score = 39.4 bits (89), Expect = 0.49, Method: Composition-based stats.
Identities = 16/226 (7%), Positives = 47/226 (20%), Gaps = 10/226 (4%)
Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
++ +Y L+ ++ ++ +A + + + P +
Sbjct: 342 CSEIPDENLKDPHAHKSSVTSCLYNLGKLYHEQGHYEEALSVYKEAIQKMPRQFAPQSLY 401
Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL------VGMSYAQMIRDVPYD 151
M K +A E + + Y ++
Sbjct: 402 NMMGEAYMRLSKLPEAEHWYMESLRSKTDHIPAHLTYGKLLALTGRKTEAEKLFLKAIEL 461
Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
+ + + + + AA
Sbjct: 462 DPTKGNCYMHYGQFLLEEARLIEAAEMAKKAAELDSMEFDVVFNAAHMLRQASLNEAAEK 521
Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR-EVVSLIQER 256
+ L + A+ L + +A + +Q +
Sbjct: 522 YYDLAARLRPNYPA---ALMNLGAILHLNGRLQKAEANYLRALQLK 564
>gi|258574197|ref|XP_002541280.1| protein bimA [Uncinocarpus reesii 1704]
gi|237901546|gb|EEP75947.1| protein bimA [Uncinocarpus reesii 1704]
Length = 794
Score = 39.4 bits (89), Expect = 0.49, Method: Composition-based stats.
Identities = 22/217 (10%), Positives = 53/217 (24%), Gaps = 6/217 (2%)
Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
Q R ++++ + L +A + FN + L
Sbjct: 449 SAQPDRSKEIEALGWTLELFSKFASGFNALSNYRCQEAIQIFNSLPQSQRETPWVLSHLG 508
Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK-- 156
+ + Q + ++ + V + ++ +
Sbjct: 509 RAYYEQAQYSEAEKFFVRVRTIAPYNLKDMEVYSTVLWHLKNAVELAYLAHELMEIDRLS 568
Query: 157 -LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
+ + T + A G YL E+ A+ ++
Sbjct: 569 PQAWCAIGNSFSLEGDHDQALKCFQRATQVEPRFAYAFTLQGHEYLSNEEHDKAMDAYRH 628
Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ +D+ H A L + Y + A +
Sbjct: 629 AIG--ADSRHY-NAWYGLGKVYEKMGKFKFAEQHYRT 662
>gi|148642321|ref|YP_001272834.1| hypothetical protein Msm_0261 [Methanobrevibacter smithii ATCC
35061]
gi|222444499|ref|ZP_03607014.1| hypothetical protein METSMIALI_00111 [Methanobrevibacter smithii
DSM 2375]
gi|148551338|gb|ABQ86466.1| conserved hypothetical protein Msm_0261 [Methanobrevibacter smithii
ATCC 35061]
gi|222434064|gb|EEE41229.1| hypothetical protein METSMIALI_00111 [Methanobrevibacter smithii
DSM 2375]
Length = 165
Score = 39.4 bits (89), Expect = 0.49, Method: Composition-based stats.
Identities = 23/140 (16%), Positives = 44/140 (31%)
Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
F + VG+ S + + ++ + Y AV + +N+ +A E
Sbjct: 10 FIFLLVIIAIAIVYVGFSMNSLDNSMAEISDNISNGDKEYNDAVNLINNKNYDEALEKAL 69
Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
S DF + + ++ K A ++ E + Q S V +YY
Sbjct: 70 YASDDFNKSSRDLSDIQNGSYNFNEVHKEYLATAIDEVELKQDAASNLVHAIYYFKNNDN 129
Query: 142 AQMIRDVPYDQRATKLMLQY 161
+ +QY
Sbjct: 130 STGSSYGNKANSLMDEAIQY 149
>gi|77920563|ref|YP_358378.1| TPR domain-containing protein [Pelobacter carbinolicus DSM 2380]
gi|77546646|gb|ABA90208.1| TPR domain protein [Pelobacter carbinolicus DSM 2380]
Length = 266
Score = 39.4 bits (89), Expect = 0.49, Method: Composition-based stats.
Identities = 21/105 (20%), Positives = 35/105 (33%)
Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
+ Y G + IG Y EY AI +F+ V+ Y D A
Sbjct: 158 KHYAEGRKQLEEFLQKNPGHSLAPNAAYWIGESYAGEKEYEKAILQFEDVIQKYGDHPKA 217
Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
A + + L AR ++ + + +P A + +K
Sbjct: 218 AAAYLKQGLTFDQLGDRQSARAILEKLVKSFPLSGEAGIAKERLK 262
>gi|289650950|ref|ZP_06482293.1| tol-pal system protein YbgF [Pseudomonas syringae pv. aesculi str.
2250]
Length = 208
Score = 39.4 bits (89), Expect = 0.51, Method: Composition-based stats.
Identities = 16/111 (14%), Positives = 36/111 (32%), Gaps = 1/111 (0%)
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI-GRYYLKRGEYVAAIPRFQLVLANY 220
I + + F + A G L +G+ A F V Y
Sbjct: 96 FDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGDLQGAGQAFAKVSQQY 155
Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+++ +L + L D+ + ++ + +YP A+ + ++
Sbjct: 156 PKHAKVPDSLYKLADVERRLGHTDKVKGILQQVVAQYPGTSAAQLAQRDLQ 206
Score = 37.9 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 32/83 (38%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
D ++ YE A +K ++F KA + F R +P + A + V + G
Sbjct: 81 EPPDPAKEKLYYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGD 140
Query: 110 YQQAASLGEEYITQYPESKNVDY 132
Q A + QYP+ V
Sbjct: 141 LQGAGQAFAKVSQQYPKHAKVPD 163
Score = 37.5 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 14/67 (20%), Positives = 28/67 (41%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
E +K ++ A F L Y ++ +A A L E +A + A + +
Sbjct: 91 YYEAAFDLIKAKDFDKASQAFTAFLRKYPNSSYAGNAQYWLGEVNLAKGDLQGAGQAFAK 150
Query: 253 IQERYPQ 259
+ ++YP+
Sbjct: 151 VSQQYPK 157
>gi|253701165|ref|YP_003022354.1| hypothetical protein GM21_2555 [Geobacter sp. M21]
gi|251776015|gb|ACT18596.1| Tetratricopeptide TPR_2 repeat protein [Geobacter sp. M21]
Length = 250
Score = 39.4 bits (89), Expect = 0.51, Method: Composition-based stats.
Identities = 30/253 (11%), Positives = 62/253 (24%), Gaps = 17/253 (6%)
Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
+ I S + F G Y+ F E N++ A +
Sbjct: 5 IPIMLSFILLFSAGCALSQGDKNRSIY---------HYQMGQSFYAENNYTGALLELTEA 55
Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
+ P L ++ + + + + ++ +++N V YL +
Sbjct: 56 EKLTPNDPDLLNLLGLTYYRKERYDLAEAKYLKAIDRKERFSDARNNLGVNYLEMKRWDD 115
Query: 144 MIRDV-----PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
I + + + + +GR
Sbjct: 116 AIEQFKLVQDDIFYQGQDGAAINLGLAYLGKGEYQQALSVLRNAVGKNSSDPRIRLNLGR 175
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
Y + AI +Q L A L A + L D A+ + P
Sbjct: 176 VYFALEKNELAIEEYQKALQL---NRFYASAYYHLGLAQMKLKDADAAKSAFQDVVRLAP 232
Query: 259 QGYWARYVETLVK 271
+ ++
Sbjct: 233 DSEIGQLSREYLE 245
>gi|39996268|ref|NP_952219.1| TPR domain protein [Geobacter sulfurreducens PCA]
gi|39983148|gb|AAR34542.1| TPR domain protein [Geobacter sulfurreducens PCA]
gi|298505281|gb|ADI84004.1| TPR domain protein [Geobacter sulfurreducens KN400]
Length = 266
Score = 39.4 bits (89), Expect = 0.51, Method: Composition-based stats.
Identities = 24/197 (12%), Positives = 48/197 (24%), Gaps = 6/197 (3%)
Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
E+ K + + +F+ A F C P L + + + +Q
Sbjct: 3 ETNNELLAKGISLAEGGDFTAAEAMFRTCVERAPDDPEGYFYLGEALVEEGKLAEARQQY 62
Query: 115 SL-GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM--LQYMSRIVERYTN 171
+ + + A + + + + +
Sbjct: 63 EKGLALAPGDVDGQIALGDICLELAEHEAALAAYRRAVELDPRNADGYVNIGLVYNSLEE 122
Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231
+ A +G + GE AI F+ + A
Sbjct: 123 TSKAIEAFEKALEIDPANVFAYNGLGDAWYGLGEREKAIDAFRKGIELDPTDAA---AHF 179
Query: 232 RLVEAYVALALMDEARE 248
L E Y L +EA +
Sbjct: 180 NLGELYYDLGETEEAEK 196
>gi|255565583|ref|XP_002523781.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536869|gb|EEF38507.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 661
Score = 39.4 bits (89), Expect = 0.52, Method: Composition-based stats.
Identities = 27/233 (11%), Positives = 64/233 (27%), Gaps = 4/233 (1%)
Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
F TIF ++ + + R ++ + +A E F
Sbjct: 229 FEATIFVCNSLINMYSKSGMVKNAKAVFDNMVTRDAISWNSMVAGYVANGLYLEAIEMFY 288
Query: 82 QC-SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
S++ S G +Q + +Y + +
Sbjct: 289 HLRLAGVKLTNFIFSSVIKSCANIKELGFARQLHGQVLKGGFEYDHNIRTALMVAYNKGR 348
Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
+ + ++ + + I N + + + R + +
Sbjct: 349 EIDDAFKIFSMMYGIRNVVSWTAIISGHLQNGLAEQAVNLFCEMSREGVRPNDYTFSTIL 408
Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+ Q++ ++Y + A+ +AYV L ++EA +V I
Sbjct: 409 AAQPVVSPFEVHAQVIKSDYEKSPSVGTALL---DAYVKLGNLNEASKVFERI 458
>gi|94263068|ref|ZP_01286887.1| N-acetylmuramoyl-L-alanine amidase [delta proteobacterium MLMS-1]
gi|93456611|gb|EAT06719.1| N-acetylmuramoyl-L-alanine amidase [delta proteobacterium MLMS-1]
Length = 569
Score = 39.4 bits (89), Expect = 0.52, Method: Composition-based stats.
Identities = 21/141 (14%), Positives = 43/141 (30%), Gaps = 8/141 (5%)
Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
+ + Y Q + + Q + R+ + + + ++L
Sbjct: 30 AEQFERISEYYQQQLLAGEQPRENWLRASQALQRLQRENPEHAIAPLSLYLLGNLHHRLH 89
Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA-LALMDEAREV 249
R + AAI F+ + A Y A++A+ L + + A
Sbjct: 90 -------RQEQNPLDLAAAITFFEDMQATYPRHRLADDALFYLANIFRHDRDEPERAGRT 142
Query: 250 VSLIQERYPQGYWARYVETLV 270
++ I YP G A +
Sbjct: 143 LARIIALYPDGELAAEARRQL 163
>gi|94266423|ref|ZP_01290118.1| N-acetylmuramoyl-L-alanine amidase [delta proteobacterium MLMS-1]
gi|93452965|gb|EAT03464.1| N-acetylmuramoyl-L-alanine amidase [delta proteobacterium MLMS-1]
Length = 569
Score = 39.4 bits (89), Expect = 0.52, Method: Composition-based stats.
Identities = 21/141 (14%), Positives = 43/141 (30%), Gaps = 8/141 (5%)
Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
+ + Y Q + + Q + R+ + + + ++L
Sbjct: 30 AEQFERISEYYQQQLLAGEQPRENWLRASQALQRLQRENPEHAIAPLSLYLLGNLHHRLH 89
Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA-LALMDEAREV 249
R + AAI F+ + A Y A++A+ L + + A
Sbjct: 90 -------RQEQNPLDLAAAITFFEDMQATYPRHRLADDALFYLANIFRHDRDEPERAGRT 142
Query: 250 VSLIQERYPQGYWARYVETLV 270
++ I YP G A +
Sbjct: 143 LARIIALYPDGELAAEARRQL 163
>gi|225681558|gb|EEH19842.1| DnaJ and TPR domain-containing protein [Paracoccidioides
brasiliensis Pb03]
Length = 675
Score = 39.4 bits (89), Expect = 0.52, Method: Composition-based stats.
Identities = 26/228 (11%), Positives = 59/228 (25%), Gaps = 19/228 (8%)
Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL---LMSAFVQYSAGKYQQAASLGEE 119
F K ++ KA + + + P + + +SA A + + A E
Sbjct: 252 AGNKFFKAGDYQKAIQEYTKAVEAQPSSSTYLSNRAAAYISAHQYLEALEDAKLADELEP 311
Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
+ Y + + + A +
Sbjct: 312 GNQKIMHRLARIYTSLGRPVEALDIYSKIQPPVSAKDKGPSEAMLHHITRAEESLREDKG 371
Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY------------SDAEHAE 227
+T+ A K + G ++ + + ++ N D
Sbjct: 372 GSMTLYCLDQAVKGLGAGIQQPRKWKLMRVEAYLKMGSVNALGDAQNIVMSILRDNNQDP 431
Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQG----YWARYVETLVK 271
+A+ + A ++A L P + R V+ L++
Sbjct: 432 DALFLRGRLFYAQGENEQAINHFKLALSLDPDSSQAIKYLRMVQKLLR 479
>gi|149280394|ref|ZP_01886514.1| putative outer membrane protein [Pedobacter sp. BAL39]
gi|149228808|gb|EDM34207.1| putative outer membrane protein [Pedobacter sp. BAL39]
Length = 556
Score = 39.4 bits (89), Expect = 0.53, Method: Composition-based stats.
Identities = 22/248 (8%), Positives = 51/248 (20%), Gaps = 21/248 (8%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
K I F +A + + D Y + ++F +
Sbjct: 1 MKKINIIIFCLATILFASC----KKSFLNEEPLDFLSTTNAY------ITNKDFEASVNN 50
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
R + ++ A P S + +++
Sbjct: 51 LYTRIRAEFYTSGEQRPFDYVFGCDIVFDGQPSATRHTNMTAAYSPLSTEIPLIHWTNLY 110
Query: 140 SYAQMIRDVPYDQR--ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
+ + + ++ + + L +
Sbjct: 111 KIVAETNTIIDRIPGSEMTDAEKTLMEARAKFFRGMAYRTLTYLYGAVPLNLTEVKSPKT 170
Query: 198 RYY--LKRGEYVAAIPRFQLVLANYSDAEHAEE-------AMARLVEAYVALALMDEARE 248
Y K I + N ++ A L E Y+A A +
Sbjct: 171 DYVRAPKAEVLAQVINDLKFAATNLPAINAVQDGQINNLAAYHLLSEVYLAAGQFQNAAD 230
Query: 249 VVSLIQER 256
+ +
Sbjct: 231 AATAVISN 238
>gi|332839951|ref|XP_003313880.1| PREDICTED: LOW QUALITY PROTEIN: transmembrane and TPR
repeat-containing protein 2-like [Pan troglodytes]
Length = 836
Score = 39.4 bits (89), Expect = 0.54, Method: Composition-based stats.
Identities = 16/226 (7%), Positives = 48/226 (21%), Gaps = 10/226 (4%)
Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
++ +Y L+ ++ ++ +A + + + P +
Sbjct: 587 CSEIPDENLKDPHAHKSSVTSCLYNLGKLYHEQGHYEEALTVYKEAIQKMPRQFAPQSLY 646
Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL------VGMSYAQMIRDVPYD 151
M K +A E + + Y + ++
Sbjct: 647 NMMGEAYMRLSKLPEAEHWYMESLRSKTDHIPAHLTYGKLLALTGRYIEAEKLFLKAIEL 706
Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
+ + + + + AA
Sbjct: 707 DPTKGNCYMHYGQFLLEEARLIEAAEMAKKAAELDSTEFDVVFNAAHMLRQASLNEAAEK 766
Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR-EVVSLIQER 256
+ L + A+ L + +A + +Q +
Sbjct: 767 YYDLAARLRPNYPA---ALMNLGAILHLNGRLQKAEANYLRALQLK 809
>gi|327272197|ref|XP_003220872.1| PREDICTED: LOW QUALITY PROTEIN: transmembrane and TPR
repeat-containing protein 1-like [Anolis carolinensis]
Length = 1054
Score = 39.4 bits (89), Expect = 0.54, Method: Composition-based stats.
Identities = 27/234 (11%), Positives = 60/234 (25%), Gaps = 11/234 (4%)
Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRY--------QREVYEKAVLFLKEQNFSKAY 77
+ S + L W+ +++L + R + Y A + +A
Sbjct: 618 VTISALLLLLFSWKTVKQNEIWLSRESLFRSGVQTLPHNAKVHYNYANFLKDQGRDREAI 677
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
++ +P A +L A +Y + A + +
Sbjct: 678 YHYKTALELYPRHASALNNLGTLTKDLAEAKEYYKRALQLNPQHNRALFNLGNLLKSQGK 737
Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
++RD ++ ++ + + G
Sbjct: 738 KGEAVLLLRDSIRYGPEFADAYSSLASLLAEQEQLKEAEEVYQAGIENCPDSSDLHNNYG 797
Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
+ + G A+ +Q + + AM L Y +L EA
Sbjct: 798 VFLVDTGSPETAVSHYQKAIQLSPNHHV---AMVNLGRLYRSLGQNKEAEMWYK 848
>gi|120437826|ref|YP_863512.1| TPR repeat-containing protein [Gramella forsetii KT0803]
gi|117579976|emb|CAL68445.1| secreted protein containing tetratricopeptide repeats [Gramella
forsetii KT0803]
Length = 594
Score = 39.4 bits (89), Expect = 0.54, Method: Composition-based stats.
Identities = 26/226 (11%), Positives = 74/226 (32%), Gaps = 3/226 (1%)
Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
+ + + A + + ++ F++A Y++Q +++ + A
Sbjct: 360 KSSAEITPGKFDLAKVKMAMADILVVQEKFNEALIYYSQIQNLVKNDVISQDARFKVAKT 419
Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
Y G ++ A + + + + D + + +S + + +
Sbjct: 420 SYYKGDFKWAKTQLDILKSSTSQLIANDAMELSLLISDNSLEDSTQTALKKFAQA--DLL 477
Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
++ + + G + + Y K ++ +A +Q+++ N++D
Sbjct: 478 AFQKKNGEAIKALDSILINHKGEKIEDEALLSQAKLYEKEEDFKSAEKNYQIIIHNFNDD 537
Query: 224 EHAEEAMARLVEAY-VALALMDEAREVVSLIQERYPQGYWARYVET 268
A+ A L E Y L + A+ + I + +
Sbjct: 538 ILADNAHYFLAELYANQLQDPERAKSLYEQIIFNFADSIYFVEARK 583
>gi|319954266|ref|YP_004165533.1| cellulase [Cellulophaga algicola DSM 14237]
gi|319422926|gb|ADV50035.1| Cellulase [Cellulophaga algicola DSM 14237]
Length = 366
Score = 39.4 bits (89), Expect = 0.54, Method: Composition-based stats.
Identities = 22/221 (9%), Positives = 49/221 (22%), Gaps = 12/221 (5%)
Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLK-------- 69
+ + L +++ F+V + ++ T+ E A +
Sbjct: 1 MMMRIPLFKTVFLSLFFIVSCSSDAEPEIIDPVDTEETSDATDEEPATPEPENTPEPETD 60
Query: 70 ---EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126
N +AY + L + + T +
Sbjct: 61 TATATNVVEAYGQLSVSGNKIVDKNNNPIQLRGMSLFWSQWMGQYYTTGTVDWLQTDWNA 120
Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
+ + Y A V +S + +
Sbjct: 121 TVVRAAMGVEDADGYISNPATEKAKVFAVIDAAINAGIYVIVDWHSHHAEDHIPEAKAFF 180
Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
++A K + + + VL Y + AE
Sbjct: 181 AEVAQKYGDQPNIIYETYN-EPLDVSWTGVLKPYHETIIAE 220
>gi|322387989|ref|ZP_08061596.1| tetratricopeptide (TPR) domain protein [Streptococcus infantis ATCC
700779]
gi|321141262|gb|EFX36760.1| tetratricopeptide (TPR) domain protein [Streptococcus infantis ATCC
700779]
Length = 410
Score = 39.4 bits (89), Expect = 0.54, Method: Composition-based stats.
Identities = 33/233 (14%), Positives = 70/233 (30%), Gaps = 5/233 (2%)
Query: 39 ERQSSRDVYLDSVTDVRYQRE-VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
+ S +L+ ++ Y + +E A L+ ++++ KA YF Q P
Sbjct: 181 GKFESAIEFLEKALELEYDDQTAFELASLYFDQEDYQKAVLYFKQLDTISPDFEGYEYGY 240
Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
+ ++ + + A G + Q + Q
Sbjct: 241 SQALHKEHQTEEALKIAQQGLSKNPFETRLLLLASQLSYELHQPEQAEAYLIQAQENADD 300
Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
+ + R+ Y + L K + Y VA +LV
Sbjct: 301 QEEILLRLATIYQEQERYEDILALAVYEPENLLTKWMIARSYQETEELDVAYEHYKELVT 360
Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
+ E E+ + L E L ++EA++ + + P + + +
Sbjct: 361 ELKDNPEFLEQFIYLLRE----LGKLEEAKDYIQSYLQLVPDDLQMQDLYDYL 409
>gi|330996269|ref|ZP_08320154.1| outer membrane assembly lipoprotein YfiO [Paraprevotella
xylaniphila YIT 11841]
gi|329573461|gb|EGG55068.1| outer membrane assembly lipoprotein YfiO [Paraprevotella
xylaniphila YIT 11841]
Length = 289
Score = 39.4 bits (89), Expect = 0.55, Method: Composition-based stats.
Identities = 43/283 (15%), Positives = 95/283 (33%), Gaps = 32/283 (11%)
Query: 11 IFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKE 70
F Y + + + ++ S A+ L + ++ D YE A + +
Sbjct: 5 NFAVQLYNMKR--IFLWLSGAMLLLASCNQYNNVMKTADYDYK-------YEAAKEYFVK 55
Query: 71 QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
+S++ + + L M A ++ G + A S ++Y YP+ V
Sbjct: 56 GQYSRSSVLLGELVTLMKGTSRGEECLYMLAMSEFCDGNFDVAHSYFKKYYQSYPKGVYV 115
Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
+Y + G + + + D DQ +T ++ ++ Y + + + ++++
Sbjct: 116 EYARFYAGRALYESVPDTRLDQSSTMAAVKEFQDFLDYYPYTSLKDRTQEMIFALQDKMV 175
Query: 191 AKEV-----------EIGRYYLKRGEYVAAIPRFQLVLANYSDAE--HAEEAMARLVEAY 237
KE + Y A I + L +Y A EE ++ A
Sbjct: 176 EKEFQAAKLYYDLGSYMYNCSYGGSNYEACIVTARNALLDYPYASPERREEFSIMILRAK 235
Query: 238 VALALMDEAREVVSLIQ----------ERYPQGYWARYVETLV 270
LAL + + + YP+ + + + +
Sbjct: 236 YQLALQSVEEKRLDRYRDTIDEYYGFMNEYPESKYLKDAQRIF 278
>gi|196228877|ref|ZP_03127743.1| Tetratricopeptide domain protein [Chthoniobacter flavus Ellin428]
gi|196227158|gb|EDY21662.1| Tetratricopeptide domain protein [Chthoniobacter flavus Ellin428]
Length = 313
Score = 39.4 bits (89), Expect = 0.55, Method: Composition-based stats.
Identities = 27/240 (11%), Positives = 62/240 (25%), Gaps = 10/240 (4%)
Query: 19 LYKFALTIFFSIAV---CFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
+ +F FF ++ C + ++ + D + +V ++A+ F +E F +
Sbjct: 1 MLRFWKKRFFVLSFGCVCTIGSAHVVAAEKAEKPAKADDGHAIKV-QQAMQFFQENKFKE 59
Query: 76 AYEYFNQC--SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
A F + +L + G V
Sbjct: 60 AEAAFRALLAEDEKAHGLDHPDTLQDRKNLAIIMGVEGDYIGAENVLQEGIDLESGVLGP 119
Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
+ + ++ + ++ +I+ + A +
Sbjct: 120 ENKDVIEFRELFASTLAREGRNTEAVREFRKILALRERVFGLDDATTARARSNLGSTLND 179
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+ R + I +L LV+ +AL EA + I
Sbjct: 180 IGEYREAEQLLRAAQPILDKKLS----PRDPAVLLNRTNLVKTLIALGRFAEAEKEQRTI 235
>gi|291613879|ref|YP_003524036.1| type IV pilus biogenesis/stability protein PilW [Sideroxydans
lithotrophicus ES-1]
gi|291583991|gb|ADE11649.1| type IV pilus biogenesis/stability protein PilW [Sideroxydans
lithotrophicus ES-1]
Length = 254
Score = 39.4 bits (89), Expect = 0.55, Method: Composition-based stats.
Identities = 24/249 (9%), Positives = 59/249 (23%), Gaps = 10/249 (4%)
Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
L+K L + F G + + + R E+ A + + + A
Sbjct: 2 NLFKLFLIVSFLTGCASAGGGSEGTPQQDTTRAQAIARIHTEL---AASYFERSQYGVAL 58
Query: 78 EYFNQCSRDFPFAGVARKS-----LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132
+ + A + + + G T +
Sbjct: 59 QEVGVALQANSDFAPAYNMRALIRMALHEDDKADEDFQHSLKLDGTSSDTHNNYGWFLCQ 118
Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
+ +L M ++ + + V +
Sbjct: 119 RGHTKEAIKQYQAALDNPLYATPELAYANMGMCYKKAGSMKEAESNLQRALVLHPDMPNA 178
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ +G++ AA F+ SD E + V + ++
Sbjct: 179 LYGLADLSYSKGDFAAAKSYFRRFSQGASD--LNAEQLWLAVRIERKMHDLNSEASYALQ 236
Query: 253 IQERYPQGY 261
+++ +P
Sbjct: 237 LRKNFPDSR 245
>gi|260641889|ref|ZP_05413890.2| endo-beta-N-acetylglucosaminidase F2 [Bacteroides finegoldii DSM
17565]
gi|260624234|gb|EEX47105.1| endo-beta-N-acetylglucosaminidase F2 [Bacteroides finegoldii DSM
17565]
Length = 372
Score = 39.4 bits (89), Expect = 0.55, Method: Composition-based stats.
Identities = 26/224 (11%), Positives = 59/224 (26%), Gaps = 11/224 (4%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + IF S+AV V + + ++ + Y +A+ K+ + +
Sbjct: 1 MRRLIYFIFASVAVLVFVQCSDWTEMENKFTEPVNINSED--YYRALREYKKTDHPICFG 58
Query: 79 YFNQCSRDFPF---------AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129
+++ S + SL AF A K ++
Sbjct: 59 WYSDWSGTGDDMNNQLRGIPDSMDLVSLWGGAFNLTEAQKSDLKEVREKKGTRILYCQHI 118
Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
+D + S + + + +S Y G
Sbjct: 119 MDIGRSMTPASVENDHIVDGVQYNSYEEAMAAYWGWYATGNHSTYNNHYGDGSPEGIEAA 178
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
K ++ + + +Y ++ + E M L
Sbjct: 179 IRKYAQVIADSVNKYDYDGFDIDYEPSWGYPGNISSHPERMHIL 222
>gi|220918558|ref|YP_002493862.1| TPR repeat-containing protein [Anaeromyxobacter dehalogenans 2CP-1]
gi|219956412|gb|ACL66796.1| TPR repeat-containing protein [Anaeromyxobacter dehalogenans 2CP-1]
Length = 1191
Score = 39.4 bits (89), Expect = 0.55, Method: Composition-based stats.
Identities = 9/116 (7%), Positives = 32/116 (27%), Gaps = 3/116 (2%)
Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR- 212
+L + + + + E + ++ +
Sbjct: 105 YFRLAELLWEESQYFFFEANRRDDCIIEIGTSNPGEVGRLQEEKKGLDQQSRRLQEQAVA 164
Query: 213 -FQLVLANYSDAEHAEEAMARLVEAYVALALMD-EAREVVSLIQERYPQGYWARYV 266
++ +++ Y +E + L E D +A + + +++P +
Sbjct: 165 LYKAIISRYPSYPRLDEVLYFLGENLSRRDRNDPDALKAYRALIQKFPSSRYVPDA 220
Score = 37.9 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 26/203 (12%), Positives = 58/203 (28%), Gaps = 13/203 (6%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
++ Y+ A L + F +A + F + + D P +A S + G
Sbjct: 582 QPRGEKWVEVAYKLANLHYRHNAFGEASDLFTRIALDHPQHELAGYSANLVLDAYNLLGD 641
Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
++ + + + + Q V ++ + + + +
Sbjct: 642 WRNVNGWAKRFYDNRALIAAHPQLKDDLSRVIEQSAFKVIEEKEKAQDFVGAAEQYLA-- 699
Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL-KRGEYVAAIPRFQLVLANYSDAEHAEE 228
F ++LA + A+ + L Y A +
Sbjct: 700 ----------FARDWPTSRLAPTAYYNASVDYVRAHRLDRAMEIREQFLQRYPTHTLAPK 749
Query: 229 AMARLVEAYVALALMDEAREVVS 251
++ EAY A+A A +
Sbjct: 750 SLYDNAEAYEAVADFGRAADHYE 772
>gi|268316245|ref|YP_003289964.1| Extracellular ligand-binding receptor [Rhodothermus marinus DSM
4252]
gi|262333779|gb|ACY47576.1| Extracellular ligand-binding receptor [Rhodothermus marinus DSM
4252]
Length = 476
Score = 39.4 bits (89), Expect = 0.56, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 28/90 (31%)
Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
+ R + A E +RG+Y A +F+ V+ Y A +A
Sbjct: 25 QPAEIPRIEAAETEFVQALQAFERGDYGLAYRQFRRVIDAYPAHRRTTAAWIMAAKALYR 84
Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETL 269
+ D RYP + E L
Sbjct: 85 MGEYDHVIRWADEFVARYPTSRYRSEAERL 114
>gi|150009146|ref|YP_001303889.1| hypothetical protein BDI_2548 [Parabacteroides distasonis ATCC
8503]
gi|149937570|gb|ABR44267.1| putative outer membrane protein, probably involved in nutrient
binding [Parabacteroides distasonis ATCC 8503]
Length = 608
Score = 39.4 bits (89), Expect = 0.56, Method: Composition-based stats.
Identities = 25/200 (12%), Positives = 50/200 (25%), Gaps = 8/200 (4%)
Query: 71 QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
N + Y + F + ++Y+ E V
Sbjct: 338 GNPFEKYAKCDYRVIPFHTTDANGGYEGFFLQGMQMQYDKSKQYGFTDQYVNGSEEYAGV 397
Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
V+ +++ D + + ++ Y V ++Q+
Sbjct: 398 PLVFVDQVGRFSEQAELKKKDGESDEAYKARFITYMKEVAERGYFICNDADVIAKKSQVT 457
Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA--EEAMARLVEAYVALALMDEARE 248
E G + K F+ E L E Y +A E
Sbjct: 458 TGEENSGIRFNKFPYLPDHDGLFRS-----QSTPEMRLAEIYYSLAECYYREGNKAKAAE 512
Query: 249 VVSLI-QERYPQGYWARYVE 267
++ + YP W++Y
Sbjct: 513 LLDYVRIRNYPTEEWSKYSY 532
>gi|150020214|ref|YP_001305568.1| TPR repeat-containing protein [Thermosipho melanesiensis BI429]
gi|149792735|gb|ABR30183.1| Tetratricopeptide TPR_2 repeat protein [Thermosipho melanesiensis
BI429]
Length = 513
Score = 39.4 bits (89), Expect = 0.56, Method: Composition-based stats.
Identities = 29/209 (13%), Positives = 61/209 (29%), Gaps = 9/209 (4%)
Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
YEK L QN+ A E + L+ + + +
Sbjct: 62 YYEKFKEHLNAQNYEDAREILEKAKNVLYDYRYHFYYGLLFSKLGDYENAEVELKRSLAM 121
Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
Y + + YL + + + + L + Y + +
Sbjct: 122 NPNFYLGYYELGNLLYLKKEYDDAIQMYLKAFEINKEFSLPLLKM------GDAYFENGQ 175
Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA---EHAEEAMARLVEA 236
F + A K ++ + YL+ G +I +F+ + + E+ E L
Sbjct: 176 FKDAEIAYKTALKVEKLSQIYLRLGVLYNSIQKFEKAEKIFREGLSVEYKPEIAYNLAYT 235
Query: 237 YVALALMDEAREVVSLIQERYPQGYWARY 265
L +A +V+ + + +P
Sbjct: 236 LSRLGKHFQALQVLKELSKNFPSTEVYNE 264
>gi|34541550|ref|NP_906029.1| TPR domain-containing protein [Porphyromonas gingivalis W83]
gi|34397867|gb|AAQ66928.1| TPR domain protein [Porphyromonas gingivalis W83]
Length = 1160
Score = 39.4 bits (89), Expect = 0.56, Method: Composition-based stats.
Identities = 13/68 (19%), Positives = 29/68 (42%)
Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
+ + ++ + ++ +L Y + E + + RL Y + EA +LI +
Sbjct: 612 AVFNERMEKFDESADTYETLLRRYPNYEKKMDVLYRLFMLYTRMNNKPEAERCRALILQY 671
Query: 257 YPQGYWAR 264
YP+ A+
Sbjct: 672 YPEDNLAK 679
>gi|281340147|gb|EFB15731.1| hypothetical protein PANDA_008707 [Ailuropoda melanoleuca]
Length = 818
Score = 39.4 bits (89), Expect = 0.56, Method: Composition-based stats.
Identities = 17/226 (7%), Positives = 50/226 (22%), Gaps = 10/226 (4%)
Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
++ +Y L+ ++ ++ A + + + P +
Sbjct: 569 CSEIPDENLKDPHAHKSSVTSCLYNLGKLYHEQGHYEDALSVYKEAIQKMPRQFAPQSLY 628
Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK- 156
M K +A E + + Y + + + +A +
Sbjct: 629 NMMGEAYMRLSKLPEAEHWYMESLRSKTDHIPAHLTYGKLLALTGRKSEAEKFFLKAIEL 688
Query: 157 -----LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
+ + + + + AA
Sbjct: 689 DPTKGNCYMHYGQFLLEEARLIEAAEMAKKAAELDSTEFDVVFSAAHMLRQASLNEAAEK 748
Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR-EVVSLIQER 256
+ L + A+ L + +A + +Q +
Sbjct: 749 YYDLAARLRPNYPA---ALMNLGAILHLNGRLQKAEANYLRALQLK 791
>gi|225848002|ref|YP_002728165.1| tetratricopeptide repeat domain protein [Sulfurihydrogenibium
azorense Az-Fu1]
gi|225644404|gb|ACN99454.1| tetratricopeptide repeat domain protein [Sulfurihydrogenibium
azorense Az-Fu1]
Length = 921
Score = 39.4 bits (89), Expect = 0.56, Method: Composition-based stats.
Identities = 21/240 (8%), Positives = 55/240 (22%), Gaps = 12/240 (5%)
Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFL----KEQNFSK---AYEYFNQCSRDFPFAG 91
++ + + Y ++Y+KA L + ++ + A Y +
Sbjct: 388 AKEKNDEETYFYCGLSAYAAKLYKKAQECLFNIIESKDLERKKTALTYLAEIYYITDDEE 447
Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151
+ + + + D V + ++
Sbjct: 448 NYINIVSLLKDIDEDLAYNYLGWYFFKNKDYLNAYKSFKDPYMKAVSLFNYGDVQKAKEL 507
Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
+ + + Y
Sbjct: 508 INGRNDRKSLFLSAYIDIKQGDLESARSKLKEIAQQYNDELAKKAMYLYAYLYFSEGNFQ 567
Query: 212 RFQLVLANYSDA-----EHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
+ N+ + + ++A+ R+ ++Y L D AR + E+Y A
Sbjct: 568 QAIKEFENFRNTFKEDDVYNQKALLRIADSYYNLGEKDLARSIYKEFIEKYKDRKEAVDA 627
>gi|315587165|gb|ADU41546.1| paralysed flagella protein [Helicobacter pylori 35A]
Length = 803
Score = 39.4 bits (89), Expect = 0.57, Method: Composition-based stats.
Identities = 8/53 (15%), Positives = 15/53 (28%)
Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
NY E + + +A +A I Y +A + +
Sbjct: 262 KNYPTDPSIPEVLYYVAKALDENNNYKQAMRYYKRILLEYKDSRYAPLAQMRL 314
>gi|158422150|ref|YP_001523442.1| TPR repeat-containing protein [Azorhizobium caulinodans ORS 571]
gi|158329039|dbj|BAF86524.1| TPR repeat precursor [Azorhizobium caulinodans ORS 571]
Length = 306
Score = 39.4 bits (89), Expect = 0.57, Method: Composition-based stats.
Identities = 19/112 (16%), Positives = 36/112 (32%), Gaps = 14/112 (12%)
Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
++ Q + ++ Y A F + G R Y
Sbjct: 190 YSYVQRQDYPQAEQTFKQFLQTYPTDRLTPDATFML--------------GETLYLRQTY 235
Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
A +F V Y + A +A+ RL ++ AL + A + + ++P
Sbjct: 236 KEAAEQFLQVSTKYPNFTRAPDALLRLGQSLAALNEREAACATFAEVDRKFP 287
Score = 38.6 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 31/78 (39%), Gaps = 2/78 (2%)
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
++G Y++R +Y A F+ L Y +A L E EA E +
Sbjct: 186 YDLGYSYVQRQDYPQAEQTFKQFLQTYPTDRLTPDATFMLGETLYLRQTYKEAAEQFLQV 245
Query: 254 QERYPQGYWARYVETLVK 271
+YP + R + L++
Sbjct: 246 STKYPN--FTRAPDALLR 261
>gi|15835449|ref|NP_297208.1| hypothetical protein TC0835 [Chlamydia muridarum Nigg]
gi|270285630|ref|ZP_06195024.1| hypothetical protein CmurN_04308 [Chlamydia muridarum Nigg]
gi|270289639|ref|ZP_06195941.1| hypothetical protein CmurW_04358 [Chlamydia muridarum Weiss]
gi|301337026|ref|ZP_07225228.1| hypothetical protein CmurM_04310 [Chlamydia muridarum MopnTet14]
gi|7190863|gb|AAF39635.1| conserved hypothetical protein [Chlamydia muridarum Nigg]
Length = 318
Score = 39.4 bits (89), Expect = 0.57, Method: Composition-based stats.
Identities = 26/220 (11%), Positives = 67/220 (30%), Gaps = 13/220 (5%)
Query: 48 LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107
T +EK + + + F +A F + FP + K+ ++
Sbjct: 34 PKKYTPKYSPELYFEKGDHYFQAKKFKQALLCFGMITHHFPEHALRPKAQFLTGICYLEM 93
Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
G A +Y + ++ + L+ ++++
Sbjct: 94 GHPDLADKALTQYQELSDTEYSEQLFSIKYSIAQSFANGKRKNIV-----ALEGFPKLLK 148
Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
T++ + + + A G + EY AI + V + +
Sbjct: 149 ADTDALRIFDEIVTASSDVDLKADALYSKGALLFAQKEYSEAIKTLKKVSLQFPSHSLSP 208
Query: 228 EAMARLVEAY--------VALALMDEAREVVSLIQERYPQ 259
+A + + + Y + +AR + +++++P
Sbjct: 209 KAFSLIAKIYCLQALQEPYNEQYLQDARANAAALRKQHPN 248
>gi|237724896|ref|ZP_04555377.1| TPR domain-containing protein [Bacteroides sp. D4]
gi|229436634|gb|EEO46711.1| TPR domain-containing protein [Bacteroides dorei 5_1_36/D4]
Length = 602
Score = 39.4 bits (89), Expect = 0.57, Method: Composition-based stats.
Identities = 26/244 (10%), Positives = 67/244 (27%), Gaps = 11/244 (4%)
Query: 27 FFSIAVCFLVGW------ERQSSRDVYLDSVTDVRYQRE-----VYEKAVLFLKEQNFSK 75
+ LV S ++ + ++ + +A+ ++ +
Sbjct: 11 LCVCLIGMLVSCGTVKRTSGVSGNKTVVEEKDPLTPEQRRKYDYFFLEALRMKEKGDLDA 70
Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
A+E ++ C +P + K ++A + + K YY
Sbjct: 71 AFEMYSHCLDIYPQGAATLFEISRFHMFLNQPEKGEEALKKAVDADPKSFWYKQTLAAYY 130
Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
+Y + I L+ + +++ YT + + + E
Sbjct: 131 QGKGNYPKAIYVYEDMASQFPSRLEPLMALIDLYTRTKDYQQVVNTLNRLEALDGKSEQI 190
Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
+ F + + + + L + Y+ +EA E + +
Sbjct: 191 SMEKFRMYLAMNNDQQAFTEIENLAKEYPYDMRYLTILGDVYLNNGKEEEAYETYQKVLK 250
Query: 256 RYPQ 259
P
Sbjct: 251 EEPG 254
>gi|255101184|ref|ZP_05330161.1| putative lipoprotein [Clostridium difficile QCD-63q42]
gi|255307058|ref|ZP_05351229.1| putative lipoprotein [Clostridium difficile ATCC 43255]
gi|328887656|emb|CAJ68937.2| putative lipoprotein [Clostridium difficile]
Length = 219
Score = 39.4 bits (89), Expect = 0.57, Method: Composition-based stats.
Identities = 14/96 (14%), Positives = 30/96 (31%), Gaps = 12/96 (12%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
+ + + SI FLVG ++ L + +L++ N+ KA E
Sbjct: 1 MRGRVILLISILSIFLVGCSFNKKDEINLVE------------QGKTYLEKHNYKKAMES 48
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
+ + AR + + + +
Sbjct: 49 LSSALEEDSTNENARAMYMQAMRMSNMTEFEELKNY 84
>gi|168008775|ref|XP_001757082.1| Paf1 complex protein [Physcomitrella patens subsp. patens]
gi|162691953|gb|EDQ78313.1| Paf1 complex protein [Physcomitrella patens subsp. patens]
Length = 999
Score = 39.4 bits (89), Expect = 0.57, Method: Composition-based stats.
Identities = 22/218 (10%), Positives = 53/218 (24%), Gaps = 10/218 (4%)
Query: 43 SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102
+ + +A + F +A + + + + P + ++
Sbjct: 148 QEVFKIVLDGQRDNVAALLGQACVQFNSGRFQEALKLYKKALQIHPQCPASAFDRVLQLD 207
Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
++ + Y M + L
Sbjct: 208 GNNVEALVGSGIIDLNSGDENRVQAGLEKMLAAFEIYPYCSMALNH----------LACH 257
Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
++++ + A T A + R Y R +Y A ++ A +
Sbjct: 258 YFFLDQHPMVEQLTEAALAATDHVLIKAQSYYNLARSYHTREDYDMAARYYRASTAELKN 317
Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
+ L + ++ L A + E YP
Sbjct: 318 PKDFILPYYGLGQVHLKLGDWKAALASFEKVLELYPDN 355
>gi|331268455|ref|YP_004394947.1| TPR-repeat-containing protein [Clostridium botulinum BKT015925]
gi|329125005|gb|AEB74950.1| TPR-repeat-containing protein [Clostridium botulinum BKT015925]
Length = 413
Score = 39.4 bits (89), Expect = 0.58, Method: Composition-based stats.
Identities = 12/84 (14%), Positives = 30/84 (35%), Gaps = 1/84 (1%)
Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
+ +G Y + + A+ + Y + + +E + R Y
Sbjct: 321 YDYGKDSYLYGHILFMLGVSYQNKQDVKEALKYYTEYDEKYPNENYIQEVLYRTAILYKN 380
Query: 240 LALMDEAREVVSLIQERYPQGYWA 263
+ L ++A+E + + YP ++
Sbjct: 381 VDL-NKAKEYGQKLLKNYPDCEYS 403
>gi|209519570|ref|ZP_03268362.1| cellulose synthase operon C domain protein [Burkholderia sp. H160]
gi|209499987|gb|EEA00051.1| cellulose synthase operon C domain protein [Burkholderia sp. H160]
Length = 1295
Score = 39.4 bits (89), Expect = 0.58, Method: Composition-based stats.
Identities = 8/51 (15%), Positives = 20/51 (39%), Gaps = 3/51 (5%)
Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVSLIQE---RYPQGYWARYVETLV 270
+ EA+A + E + + +A + + +++ +P LV
Sbjct: 93 SPQQPEALAMMGEIELKSNRIKDAAKYLQQLRQIAPNHPATQELADAYRLV 143
>gi|307154716|ref|YP_003890100.1| serine/threonine protein kinase [Cyanothece sp. PCC 7822]
gi|306984944|gb|ADN16825.1| serine/threonine protein kinase [Cyanothece sp. PCC 7822]
Length = 708
Score = 39.4 bits (89), Expect = 0.58, Method: Composition-based stats.
Identities = 18/205 (8%), Positives = 44/205 (21%)
Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
++Y K + Q + A + ++ P A + + + +
Sbjct: 330 NNATKMYNKGNTLYQLQRYEDALQAYDTSLNINPNNANAWQGKGDTLQALKRYQQALDSY 389
Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
+ ++ + I + S + E
Sbjct: 390 DEAIQIQPDSWQAWMGRGKVLEKLGRNLEAINSYEKVIIFKDNSWEAWSNLGELKVKLAQ 449
Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234
A + E + + +A +
Sbjct: 450 YSEAIKDLEKSLKLNPDNEEAWYQKGWSLQNLKKYEDAIKSYDETVKVNSSFSQAWYQKG 509
Query: 235 EAYVALALMDEAREVVSLIQERYPQ 259
Y+ L +EA E + + P
Sbjct: 510 NIYMNLEKYNEASENYAKAVQFQPD 534
Score = 35.9 bits (80), Expect = 5.4, Method: Composition-based stats.
Identities = 26/239 (10%), Positives = 69/239 (28%), Gaps = 10/239 (4%)
Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99
++ +D+ + + Y+K + + A + +++ + A
Sbjct: 451 SEAIKDLEKSLKLNPDNEEAWYQKGWSLQNLKKYEDAIKSYDETVKVNSSFSQAWYQKGN 510
Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
+ + + ++ ++ + Y + ++ + L
Sbjct: 511 IYMNLEKYNEASENYAKAVQFQPDLYQAWYSQGIALNRLNRYEEALKTFEKATQVQSLSF 570
Query: 160 Q-YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI--GRYYLKRGEYVAAIPRFQLV 216
+ + + + Y + Y T R + ++ GEY A ++ V
Sbjct: 571 EAWYQKAWTLHILKRYAEAVSAYTTAIRLRPRDQQAWYNKANSLYNFGEYEEATAAYKQV 630
Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW----ARYVETLVK 271
+A D A L + + L EA + P + E L++
Sbjct: 631 IALQKDY---YPAWKSLGNSLLKLERYQEAINAYNQALRYKPDQPEVQASKKQAEQLLE 686
>gi|307718362|ref|YP_003873894.1| TPR domain-containing protein [Spirochaeta thermophila DSM 6192]
gi|306532087|gb|ADN01621.1| TPR domain protein [Spirochaeta thermophila DSM 6192]
Length = 653
Score = 39.4 bits (89), Expect = 0.58, Method: Composition-based stats.
Identities = 25/226 (11%), Positives = 67/226 (29%)
Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
L + Y A++ ++E +A Y + P + +L ++A+
Sbjct: 425 KEALSTEEGSNDPISAYNLALVLIEEDKAQEALSYAQKAVDLAPRVPEYQYTLGLAAYKL 484
Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
+ + A E Y + + + + + + + + + +
Sbjct: 485 GAYTVAEAAFGKAIELKPDYVKPRVQLGLLHQDKGEDDKALSLLLEAYKLDPTSFEVNNN 544
Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
+ Y + + + L + ++
Sbjct: 545 LGNLYARKKLYSESIKHYRAAIEADPKDTLVRYNLALSYLDAKEYDEAVRVFQELLKIDP 604
Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
+A +L + + L + A++V+S + E+ P VE L+
Sbjct: 605 SYWDAYYQLGKLLITLEDAEGAKKVLSTLLEKKPDYSRRAEVEKLL 650
>gi|288869801|ref|ZP_05976370.2| conserved hypothetical protein [Methanobrevibacter smithii DSM
2374]
gi|288860293|gb|EFC92591.1| conserved hypothetical protein [Methanobrevibacter smithii DSM
2374]
Length = 165
Score = 39.4 bits (89), Expect = 0.58, Method: Composition-based stats.
Identities = 23/140 (16%), Positives = 44/140 (31%)
Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
F + VG+ S + + ++ + Y AV + +N+ +A E
Sbjct: 10 FIFLLVIIAIAIVYVGFSMNSLDNSMAEISDNISNGDKEYNDAVNLINNKNYDEALEKAL 69
Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
S DF + + ++ K A ++ E + Q S V +YY
Sbjct: 70 YASDDFNKSSRDLSDIQNGSYNFNEVHKEYLATAIDEVELKQDAASNLVHAIYYFKNNDN 129
Query: 142 AQMIRDVPYDQRATKLMLQY 161
+ +QY
Sbjct: 130 STGSSYGNKANSLMDEAIQY 149
>gi|160878633|ref|YP_001557601.1| TPR repeat-containing protein [Clostridium phytofermentans ISDg]
gi|160427299|gb|ABX40862.1| Tetratricopeptide TPR_2 repeat protein [Clostridium phytofermentans
ISDg]
Length = 469
Score = 39.4 bits (89), Expect = 0.58, Method: Composition-based stats.
Identities = 9/44 (20%), Positives = 19/44 (43%)
Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
+ + L + L +EA+ + + E +P A+Y + V
Sbjct: 422 DNTLYYLGKTEQELGQYEEAKAYYNQMLESFPNSSLAKYAKQRV 465
>gi|118384080|ref|XP_001025193.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89306960|gb|EAS04948.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 658
Score = 39.4 bits (89), Expect = 0.58, Method: Composition-based stats.
Identities = 25/192 (13%), Positives = 48/192 (25%)
Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
Y + F +A +N+ + P + ++L + + + E
Sbjct: 118 YYNLGLALHDSGKFQEAISSYNKAIQLKPNYEMCYEALGNLQQDMGLIQEAIFSYNKILE 177
Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
+Y N Y + I + Y + A
Sbjct: 178 VNPKYENGYNCLANIYYKIGKVDEAISIFKQCIEVNPKHENTYINLGLTYKRKGMSEEAL 237
Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
+ EV L+ + L + EE + L AY
Sbjct: 238 ILFKRCLEINSRNEVAHYNIGLEYIHQGRVDEAILVFLKSLDLNPSYEECLNSLASAYEE 297
Query: 240 LALMDEAREVVS 251
+M++A E
Sbjct: 298 KGMMEDAIETYQ 309
Score = 37.1 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 22/225 (9%), Positives = 58/225 (25%), Gaps = 1/225 (0%)
Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
G ++S+ + + + +Y + + + KA F Q P +
Sbjct: 401 GCFLEASQYFSKSLEINPKDSQTLYHYGLCCYELEQLDKAVSAFVQSLEYDPKNENTYYN 460
Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
L + + Q + Q + E N + + + I
Sbjct: 461 LGQAYYDQNKIEESIQCFKICLEINPNNSLYYNSLGLCFCQKGQLDEGIACFKKSLDINP 520
Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
++ + Y ++ + V ++ + + Q
Sbjct: 521 SDENTLNNLGNTYRLKGNIEDSIKCYKVCLEINPRNDICHCNLGIAYFQKGIIEGAIQSY 580
Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEA-REVVSLIQERYPQG 260
+ E ++ L A+ D+A ++ +
Sbjct: 581 KKSLEINPKNEYSLYYLGLAFYEKGKFDDAILSYRQCLELNPQEN 625
>gi|313679221|ref|YP_004056960.1| tpr repeat-containing protein [Oceanithermus profundus DSM 14977]
gi|313151936|gb|ADR35787.1| TPR repeat-containing protein [Oceanithermus profundus DSM 14977]
Length = 236
Score = 39.4 bits (89), Expect = 0.59, Method: Composition-based stats.
Identities = 27/205 (13%), Positives = 54/205 (26%), Gaps = 5/205 (2%)
Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQ--CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
E A ++ ++ A + A + L + + ++A
Sbjct: 22 AEEPLSYAEQLIRSGEYALAEIALEKQIADHPVAAARLLSDVYLFEGDLDRAQHWLERAR 81
Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
G + Y + ++ ++A + V R + V
Sbjct: 82 EAGLDDAAYYWQKGRIESARANWPAAWAALRSAVALSPRPE---YALLWGAVGLAQGDAE 138
Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234
F A+ G L A + L S++ +A+
Sbjct: 139 RARLGFGKAERSGSGASALFLQGLTLLATSPEQALALLRRAQLELGSESPLKPQAIYWQA 198
Query: 235 EAYVALALMDEAREVVSLIQERYPQ 259
A L + EAR + + YP
Sbjct: 199 RALERLGRVKEARSTLRFLLRSYPG 223
>gi|307178712|gb|EFN67326.1| RNA polymerase-associated protein CTR9-like protein [Camponotus
floridanus]
Length = 1264
Score = 39.4 bits (89), Expect = 0.59, Method: Composition-based stats.
Identities = 29/199 (14%), Positives = 64/199 (32%), Gaps = 18/199 (9%)
Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
+ +A ++F R A L + G Q+ + T ++
Sbjct: 542 DKGQIYEASDWFKDALRINNEHPDAWSLLGNLHLAKMEWGPGQKKFERILKNPTTSTDAY 601
Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY-------------- 174
++ + + + Q +D ++R L +++ + +
Sbjct: 602 SLIALGNIWLQTLHQSGKDKEREKRHQDRALAMYKQVLRNDPKNIWAANGIGAVLAHKGC 661
Query: 175 VKGARFYVTVGRNQLAAKEVEI---GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231
V AR R A Y+++ ++V+AI ++ L + H E +
Sbjct: 662 VNEARDIFAQVREATAEFCDVWLNIAHIYVEQKQFVSAIQMYENCLRKFYRYHHV-EVLQ 720
Query: 232 RLVEAYVALALMDEAREVV 250
L AY + EA+ +
Sbjct: 721 YLGRAYFKAGKLKEAKLTL 739
>gi|260494205|ref|ZP_05814336.1| OfeT family oxidase-dependent iron transporter [Fusobacterium sp.
3_1_33]
gi|260198351|gb|EEW95867.1| OfeT family oxidase-dependent iron transporter [Fusobacterium sp.
3_1_33]
Length = 445
Score = 39.4 bits (89), Expect = 0.59, Method: Composition-based stats.
Identities = 11/77 (14%), Positives = 26/77 (33%), Gaps = 5/77 (6%)
Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV-----YEKAVLFLKEQN 72
++ K+ ++F I L + D ++ A +++E N
Sbjct: 7 KMKKYFKSLFAFIFAFGLFISFSSVDVEAAQKKKYDTWQDVAKDMNVEFQAAKKYIEEGN 66
Query: 73 FSKAYEYFNQCSRDFPF 89
+ +AY N+ +
Sbjct: 67 YDEAYNAMNKAYFGYYE 83
>gi|254880777|ref|ZP_05253487.1| TPR domain-containing protein [Bacteroides sp. 4_3_47FAA]
gi|254833570|gb|EET13879.1| TPR domain-containing protein [Bacteroides sp. 4_3_47FAA]
Length = 602
Score = 39.4 bits (89), Expect = 0.59, Method: Composition-based stats.
Identities = 26/244 (10%), Positives = 67/244 (27%), Gaps = 11/244 (4%)
Query: 27 FFSIAVCFLVGW------ERQSSRDVYLDSVTDVRYQRE-----VYEKAVLFLKEQNFSK 75
+ LV S ++ + ++ + +A+ ++ +
Sbjct: 11 LCVCLIGMLVSCGTVKRASGLSGNKAVVEEKDPLTPEQRRKYDYFFLEALRMKEKGDLDA 70
Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
A+E ++ C +P + K ++A + + K YY
Sbjct: 71 AFEMYSHCLDIYPQGAATLFEISRFHMFLNQPEKGEEALKKAVDADPKSFWYKQTLAAYY 130
Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
+Y + I L+ + +++ YT + + + E
Sbjct: 131 QGKGNYPKAIYVYEDMASQFPSRLEPLMALIDLYTRTKDYQQVVNTLNRLEALDGKSEQI 190
Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
+ F + + + + L + Y+ +EA E + +
Sbjct: 191 SMEEFRMYLAMNNDQQAFTEIENLAKEYPYDMRYLTILGDVYLNNGKEEEAYETYQKVLK 250
Query: 256 RYPQ 259
P
Sbjct: 251 EEPG 254
>gi|149198876|ref|ZP_01875918.1| hypothetical protein LNTAR_05904 [Lentisphaera araneosa HTCC2155]
gi|149138074|gb|EDM26485.1| hypothetical protein LNTAR_05904 [Lentisphaera araneosa HTCC2155]
Length = 1013
Score = 39.4 bits (89), Expect = 0.59, Method: Composition-based stats.
Identities = 22/224 (9%), Positives = 58/224 (25%), Gaps = 6/224 (2%)
Query: 33 CFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV 92
L ++ R+ +D+ + Y A LK A N +
Sbjct: 571 IALESYQEFLKRESGIDTKGKYKRAEAFYHIAYNLLKLDQIEGANGMLNAVETYKNYIAK 630
Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
S + + + + + + + +
Sbjct: 631 NDFSDASDKQQKNLNDFNAGLDIWKIDIDYNKIKEVKTAFNESDKKLKASPDDKSLQTTH 690
Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
Q + ++ + + +++A ++G Y +
Sbjct: 691 ------KQQLEKLQKMSSKVADSYLDWTKRNKTNSKIATILAKVGGIYQDAKMDRESQKI 744
Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
F + + D+ E+ RLV +Y+ + A + + +
Sbjct: 745 FSEISERFPDSPVLEQIQMRLVISYINNKDIGAAAKEAAKLDYE 788
>gi|300871531|ref|YP_003786404.1| putative hemolysin [Brachyspira pilosicoli 95/1000]
gi|300689232|gb|ADK31903.1| putative hemolysin [Brachyspira pilosicoli 95/1000]
Length = 346
Score = 39.4 bits (89), Expect = 0.60, Method: Composition-based stats.
Identities = 15/122 (12%), Positives = 39/122 (31%), Gaps = 10/122 (8%)
Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
+ + ++ Y S Y + +A + + YV
Sbjct: 185 YFAMNEYDRAFEIYEDFLKYYNTSIYYNEVSRTYLIQVPAIAHR-------MYVQKNYVK 237
Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
A + + + ++ EEA+ ++ E+Y + A + + ++ + E
Sbjct: 238 ARMYYNKIATLFPRTKYQEEALFKIGESYYNEKNYNSAVDYFNRVRLN---NVYTLDAEA 294
Query: 269 LV 270
L+
Sbjct: 295 LL 296
>gi|305666185|ref|YP_003862472.1| hypothetical protein FB2170_07904 [Maribacter sp. HTCC2170]
gi|88707683|gb|EAQ99924.1| hypothetical protein FB2170_07904 [Maribacter sp. HTCC2170]
Length = 757
Score = 39.4 bits (89), Expect = 0.60, Method: Composition-based stats.
Identities = 16/215 (7%), Positives = 45/215 (20%), Gaps = 10/215 (4%)
Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
++ F+ FS+ L+ + + V A +
Sbjct: 3 FIKMRSFSKLFSFSLLFSVLLSCG--DDKKAEYEKVPQKNPNAIFASTAQIADANFLGDD 60
Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
A + +Q K++ ++ A + + Y + +
Sbjct: 61 ACKQCHQAEFKDWEGSHHDKAMQLAKRETILADFDGEKFNSQGITSKFYSKGDDFFVNTE 120
Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYM----SRIVERYTNSPYVKGARFYVTVGRNQLAA 191
+Y + + + + + ++ K Y
Sbjct: 121 GPDGNYHDYKIIYTFGITPLQQYIVEFPDGRFQCLRTAWDTEKNKWFDLYPDFKVVHSEW 180
Query: 192 KEVEIGRYYLKRG----EYVAAIPRFQLVLANYSD 222
G ++ Y+
Sbjct: 181 LHWSRGGLNWNTMCSDCHSTNVRKNYKEETNGYNT 215
>gi|257463163|ref|ZP_05627563.1| hypothetical protein FuD12_04856 [Fusobacterium sp. D12]
Length = 407
Score = 39.4 bits (89), Expect = 0.60, Method: Composition-based stats.
Identities = 26/216 (12%), Positives = 62/216 (28%), Gaps = 6/216 (2%)
Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
+Y A +++ F + + ++SL + +Q + ++A
Sbjct: 188 EEAVALYRMA---FSNGKYTRKSMLFLLELANKKKEKKTIQESLQYWSKIQSLHTEERKA 244
Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
G + + S+ + + + L + R N+
Sbjct: 245 IEEGNKILGLSKASEKIIAEETREVGETEHSKQVRGNYEEYKSLYQSANRKATLRLYNAA 304
Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD--AEHAEEAMA 231
+ + A + + + + AE E
Sbjct: 305 IKDYQKALSIGKNFKETANIYDGLGNSYYGLGNYQQSIEYFQKVLTHKGVSAEKRAEVYY 364
Query: 232 RLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
+L AY + E ++ +SL++ERY W + +
Sbjct: 365 KLASAYNKVGEKREYKKYLSLLKERYANTLWGKKAQ 400
>gi|320537415|ref|ZP_08037365.1| cyclic nucleotide-binding domain protein [Treponema phagedenis
F0421]
gi|320145741|gb|EFW37407.1| cyclic nucleotide-binding domain protein [Treponema phagedenis
F0421]
Length = 332
Score = 39.4 bits (89), Expect = 0.61, Method: Composition-based stats.
Identities = 24/206 (11%), Positives = 58/206 (28%), Gaps = 16/206 (7%)
Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
+ LDS + ++ A F ++ A + + +P ++ + +
Sbjct: 115 ETLLDSEEETDSIEGLFTVASAFYNSHHYQAAGQVAKRYQELYPHGKHSQDIAQILKSSR 174
Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
G+ A + +N ++ D Q+ K
Sbjct: 175 EMVGRSFGGAEAEAKSDVLPQNFQNRPASSDSTASLTFKLAED-LAAQKNWKDAYIQYHS 233
Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
++E + A + G ++ EYV + + + +
Sbjct: 234 VIET---------------GTDENIEASYIGAGHCLYEQREYVRCLQLLTNFITQHPKSL 278
Query: 225 HAEEAMARLVEAYVALALMDEAREVV 250
EA+ + Y + D+A +
Sbjct: 279 KLAEALMYIGLCYRDMKRPDKALQFF 304
>gi|317060755|ref|ZP_07925240.1| predicted protein [Fusobacterium sp. D12]
gi|313686431|gb|EFS23266.1| predicted protein [Fusobacterium sp. D12]
Length = 409
Score = 39.4 bits (89), Expect = 0.61, Method: Composition-based stats.
Identities = 26/216 (12%), Positives = 62/216 (28%), Gaps = 6/216 (2%)
Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFN-QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
+Y A +++ F + + ++SL + +Q + ++A
Sbjct: 190 EEAVALYRMA---FSNGKYTRKSMLFLLELANKKKEKKTIQESLQYWSKIQSLHTEERKA 246
Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
G + + S+ + + + L + R N+
Sbjct: 247 IEEGNKILGLSKASEKIIAEETREVGETEHSKQVRGNYEEYKSLYQSANRKATLRLYNAA 306
Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD--AEHAEEAMA 231
+ + A + + + + AE E
Sbjct: 307 IKDYQKALSIGKNFKETANIYDGLGNSYYGLGNYQQSIEYFQKVLTHKGVSAEKRAEVYY 366
Query: 232 RLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
+L AY + E ++ +SL++ERY W + +
Sbjct: 367 KLASAYNKVGEKREYKKYLSLLKERYANTLWGKKAQ 402
>gi|313225956|emb|CBY21099.1| unnamed protein product [Oikopleura dioica]
Length = 803
Score = 39.4 bits (89), Expect = 0.61, Method: Composition-based stats.
Identities = 19/200 (9%), Positives = 50/200 (25%), Gaps = 6/200 (3%)
Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL--LMSAFVQYSAGKYQQAAS 115
+Y + + A E F + + + + SA +
Sbjct: 483 EALYNLGIACKRVDRKEDALESFIKLHQIQRTNPQVMFMIADVYRLMGDNSAAVEWLQQA 542
Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK-LMLQYMSRIVERYTNSPY 174
L + + S A Y +++++
Sbjct: 543 LSVSHNDPKLLQELGAIFDNEGDKSSAFQHNYDSYKLYPGDIRTIEWLASYYIESQFPEK 602
Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234
+V + K G A+ +++ + ++ E + LV
Sbjct: 603 AANYFARASVIDPHEVKWHLMNAACLRKVGNVHQALEKYRETHKKFPESR---EVLEYLV 659
Query: 235 EAYVALALMDEAREVVSLIQ 254
+ + EA++ ++
Sbjct: 660 RLCTDMKMDKEAKDFAHKLK 679
>gi|312963789|ref|ZP_07778260.1| hypothetical protein PFWH6_5707 [Pseudomonas fluorescens WH6]
gi|311281824|gb|EFQ60434.1| hypothetical protein PFWH6_5707 [Pseudomonas fluorescens WH6]
Length = 465
Score = 39.4 bits (89), Expect = 0.61, Method: Composition-based stats.
Identities = 35/256 (13%), Positives = 67/256 (26%), Gaps = 14/256 (5%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQN------ 72
+ ALT V L G S D L + + + A+ L++ N
Sbjct: 1 MAFRALTPLALATVTLLSGCSMFRSYDTELQATNQQLATGNI-DGALTLLEKNNTSQDKD 59
Query: 73 --FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
+ + D + A +S + + + K+ A L + +
Sbjct: 60 LLYFFEKGELLRAKGDLAGSQTAWRSADLQVYKWEESVKFDSAKYLAQFGSFLANDKVRR 119
Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
Y + + I + + + R + R A
Sbjct: 120 YEGYDYEKVMLTTQMALNLLALNDFDGART---EIKKTHEREAVIADLRDKEYLKREDEA 176
Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
+E + G V A+ ++V ++ + + Y AL D A
Sbjct: 177 QREGVTTQMKDLSGYPVQALNAPEVVGLK--NSYQSAFSHYLAGFIYEALGEKDLAAPGY 234
Query: 251 SLIQERYPQGYWARYV 266
E P
Sbjct: 235 RKAAELRPNTPLLEKA 250
>gi|290988442|ref|XP_002676930.1| predicted protein [Naegleria gruberi]
gi|284090535|gb|EFC44186.1| predicted protein [Naegleria gruberi]
Length = 249
Score = 39.4 bits (89), Expect = 0.61, Method: Composition-based stats.
Identities = 24/223 (10%), Positives = 61/223 (27%), Gaps = 4/223 (1%)
Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
+ Y + + + N+S+A + + + F+ V ++
Sbjct: 23 NPNDPIHYYNRGNISRRRGNYSEALKDYDRALELNANFSQVLTMRGATYFEIEEFEKAIA 82
Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK--LMLQYMSRIVERY 169
+ Y+ G A + Y + L Y+ ++ +
Sbjct: 83 DCERSIALDPSDNCNLLVRGKSYFKSGNLIAAFADLMDYLKTEQNNSDALSYLVKLYKIM 142
Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
++ E + Y AI + ++ N E
Sbjct: 143 KQFDTAYEFLLHIGEIEGLSFENVYERAECLEEMKNYPLAIKHWTAIMDNEPQNPRIMEI 202
Query: 230 MARLVEAYVALALMDEA-REVVSLIQERYPQGYWARYVETLVK 271
+ R + Y+ A ++ S+I+ + + L++
Sbjct: 203 LLRRGQCYMENKEFSNAIKDFQSVIESTSSENELKESAKQLIQ 245
>gi|148977415|ref|ZP_01814015.1| hypothetical protein VSWAT3_22847 [Vibrionales bacterium SWAT-3]
gi|145963367|gb|EDK28632.1| hypothetical protein VSWAT3_22847 [Vibrionales bacterium SWAT-3]
Length = 261
Score = 39.4 bits (89), Expect = 0.61, Method: Composition-based stats.
Identities = 10/91 (10%), Positives = 27/91 (29%)
Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
F + + + + +Y D+ +A+ +L +
Sbjct: 171 FQKDFPDSTFTPNSHYWLGQLYFAKKQDKEAVKSFAAVVSYKDSNKRADALVKLGDIAAR 230
Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETLV 270
+A++ + YP A+ +T +
Sbjct: 231 NNNAPQAKKYYQQVVTEYPNSASAKVAQTHL 261
Score = 36.7 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 29/79 (36%), Gaps = 3/79 (3%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
LK+ +Y AI FQ ++ D+ + L + Y A EA + +
Sbjct: 148 YQNAVDMILKQRDYTGAIAAFQKFQKDFPDSTFTPNSHYWLGQLYFAKKQDKEAVKSFAA 207
Query: 253 IQERYPQGYWARYVETLVK 271
+ Y + + LVK
Sbjct: 208 VVS-YKDSN--KRADALVK 223
>gi|298490929|ref|YP_003721106.1| TPR repeat-containing protein ['Nostoc azollae' 0708]
gi|298232847|gb|ADI63983.1| TPR repeat-containing protein ['Nostoc azollae' 0708]
Length = 266
Score = 39.4 bits (89), Expect = 0.62, Method: Composition-based stats.
Identities = 31/243 (12%), Positives = 55/243 (22%), Gaps = 3/243 (1%)
Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
+ +++ + G+ + +++ E+ KA +F A +Y+ Q
Sbjct: 2 IKIVGIFLSLLLMFGFCIPVMAQSQPIATQELQLGDELANKAFAATNRGDFVAAEDYWTQ 61
Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
FP A + S Q + E + +
Sbjct: 62 IIEKFPINAGAWINRGNSRVSQNKLEAALTDYNKAIELAPNLTDPYLNRGTALEGLGKWE 121
Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
I D Y + T + A Y L
Sbjct: 122 DAIADYNYVLALDPNDAMAYNNRGNAKTGLGKWEDAISDYQKATAIAPNFAFARANYALA 181
Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE---VVSLIQERYPQ 259
E + + + A L AY EA + RY
Sbjct: 182 LYETGQTDKAIREMRNIVRKYPKFADMRAALTAAYWVGGQKGEAESNWVAAYGLDTRYKD 241
Query: 260 GYW 262
W
Sbjct: 242 MDW 244
>gi|94263356|ref|ZP_01287171.1| hypothetical protein MldDRAFT_1322 [delta proteobacterium MLMS-1]
gi|94268863|ref|ZP_01291305.1| hypothetical protein MldDRAFT_2566 [delta proteobacterium MLMS-1]
gi|93451437|gb|EAT02281.1| hypothetical protein MldDRAFT_2566 [delta proteobacterium MLMS-1]
gi|93456311|gb|EAT06441.1| hypothetical protein MldDRAFT_1322 [delta proteobacterium MLMS-1]
Length = 150
Score = 39.4 bits (89), Expect = 0.62, Method: Composition-based stats.
Identities = 11/72 (15%), Positives = 24/72 (33%), Gaps = 1/72 (1%)
Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA-YVALALMDEAREVVSLIQE 255
+Y+ + A R + +LA Y +++ EA+ Y + +
Sbjct: 74 AKYHFDHDRFAEATARLEQLLAEYGRSDNTPEAIFLSGVCGYKQSHDPKPLKAAYERLSA 133
Query: 256 RYPQGYWARYVE 267
+P W +
Sbjct: 134 DFPASEWTKRAY 145
>gi|326435668|gb|EGD81238.1| tetratricopeptide protein [Salpingoeca sp. ATCC 50818]
Length = 863
Score = 39.0 bits (88), Expect = 0.62, Method: Composition-based stats.
Identities = 12/230 (5%), Positives = 49/230 (21%), Gaps = 14/230 (6%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
++ + ++ +A E F++ + + +
Sbjct: 433 EKHPNTADTYNNIGSVYYSKGDYDRAIECFDKALAVRVETLGEKHPSTAQTYNNLGGAYH 492
Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR--DVPYDQRATKLMLQYMSRIVER 168
+ + + + V+ + + + + + +
Sbjct: 493 DKGDYDKAIALYEKALAITVEALGEKHPSTATSYNNLGGAYARKGEYDKAIACYEKALAI 552
Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
Y + + N AA + A + + + +
Sbjct: 553 YAETL-GEKHPSTADTYNNLGAAYVDKGQYGKAIHHYEQALAIKVETLGEKHPSTAMT-- 609
Query: 229 AMARLVEAYVALALMDEAREV--------VSLIQERYPQGYWARYVETLV 270
+ + ++A + + +P A +
Sbjct: 610 -YFNIGLLHDTRGDKEQACAYVQQALDVFATTLGPDHPNTRKAERSLRRI 658
>gi|166365168|ref|YP_001657441.1| periplasmic protein [Microcystis aeruginosa NIES-843]
gi|166087541|dbj|BAG02249.1| periplasmic protein [Microcystis aeruginosa NIES-843]
Length = 260
Score = 39.0 bits (88), Expect = 0.62, Method: Composition-based stats.
Identities = 24/194 (12%), Positives = 50/194 (25%), Gaps = 6/194 (3%)
Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
E Y + V L ++S A F Q + P A + + V + +
Sbjct: 34 AVEFYNRGVDRLTAGDYSGAIADFTQALQLEPKDADAYYNRGYAELVLGQYERAIADYTQ 93
Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
+ Y + + + Y + D + I +
Sbjct: 94 ALTINSNYVNALGNRCYVHYLTKKYEAAVEDCTKAIALNGNFADFF--IYRGNAKDDLGR 151
Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA----EEAMAR 232
+ R + R + ++ L +Y+++ EA
Sbjct: 152 HLEAIEDYTKALSLQGTRGQDRIFYNRALAHNRAGQQEMALRDYNESLKINANFAEAYHN 211
Query: 233 LVEAYVALALMDEA 246
Y L ++A
Sbjct: 212 RGLTYYKLGNREKA 225
>gi|146298826|ref|YP_001193417.1| TPR repeat-containing protein [Flavobacterium johnsoniae UW101]
gi|146153244|gb|ABQ04098.1| Tetratricopeptide TPR_2 repeat protein [Flavobacterium johnsoniae
UW101]
Length = 449
Score = 39.0 bits (88), Expect = 0.62, Method: Composition-based stats.
Identities = 30/244 (12%), Positives = 67/244 (27%), Gaps = 6/244 (2%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K L I F + Q+ + + + ++ + +++ +N+ KA
Sbjct: 1 MKKRVLIILFFALLSNAASVFAQTEPEDIALAPDEY---QDAFYESLKQKGIENYDKAIA 57
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+C + P VA + + Q A + + Y
Sbjct: 58 SLEKCIKLKPSDAVAYFEVGKNYLALKEYQNAQTAFEKATQLNPKNKWYWLGIYDVSYET 117
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
+Y I + + + + A + + + +EV +
Sbjct: 118 KNYPLAIETIQKIIVFDEEYKDDLISLYMITNQYDKALIAINEMNDKFGKSSDREVYKSQ 177
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
+ A I + E L+ Y D+A +V + + P
Sbjct: 178 ILSQGKYQNAEISNLIEQIKKNPKEESN---YVNLIFLYSKSDETDKAVDVAKQLAKELP 234
Query: 259 QGYW 262
W
Sbjct: 235 NSEW 238
>gi|149742883|ref|XP_001490839.1| PREDICTED: transmembrane and tetratricopeptide repeat containing 2
[Equus caballus]
Length = 836
Score = 39.0 bits (88), Expect = 0.63, Method: Composition-based stats.
Identities = 21/225 (9%), Positives = 57/225 (25%), Gaps = 8/225 (3%)
Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
S ++ +Y L+ ++ ++ A + + + P +
Sbjct: 587 CSEISDENLKDPHAHKSSVTSCLYNLGKLYHEQGHYEDALSVYKEAIQKMPRQFAPQSLY 646
Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
M K +A E + + Y + + + +A +
Sbjct: 647 NMMGEAYMRLSKLPEAEHWYMESLRSKTDHIPAHLTYGKLLALTGRKSEAEKFFLKAIE- 705
Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
L + ++ AR + AA+ + ++
Sbjct: 706 -LDPTKGNCYMHYGQFLLEEARLIEAAEMAKKAAELDSTEFDVVFNAAHMLRQASLNEAA 764
Query: 218 ANYSD-----AEHAEEAMARLVEAYVALALMDEAR-EVVSLIQER 256
Y D + A+ L + +A + ++ +
Sbjct: 765 EKYYDLAAKLRPNYPAALMNLGAILHLNGRLQKAETNYLRALRLK 809
>gi|24215272|ref|NP_712753.1| TPR-repeat-containing protein [Leptospira interrogans serovar Lai
str. 56601]
gi|45657285|ref|YP_001371.1| hypothetical protein LIC11408 [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|24196364|gb|AAN49771.1|AE011424_9 TPR-repeat-containing protein [Leptospira interrogans serovar Lai
str. 56601]
gi|45600523|gb|AAS70008.1| conserved hypothetical protein [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
Length = 369
Score = 39.0 bits (88), Expect = 0.63, Method: Composition-based stats.
Identities = 22/198 (11%), Positives = 50/198 (25%)
Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
LF K++++ A EY+++C ++ P + L+ + + A
Sbjct: 59 GDLFFKKKDYKNAIEYYHKCIQEDPSNKFSLMGLMNCYREMNLLSRVIEVAEEYRHITIT 118
Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
+ + ++ + + + + Y K A +
Sbjct: 119 DASILSRVADAHRKLKNFKESEIYYMQALQINPKDQYVIVGLGHLYFACQKYKDAIHWWE 178
Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243
+ + Q A+ L E+Y
Sbjct: 179 KLLLIQPDNIKILTEIGNSYRKIKDYDEAIQYYHRAAELDRKNFFALYGLAESYRGKKDF 238
Query: 244 DEAREVVSLIQERYPQGY 261
+A + I E P
Sbjct: 239 HKANQYWERILEFDPDNK 256
>gi|163787843|ref|ZP_02182290.1| hypothetical protein FBALC1_04852 [Flavobacteriales bacterium
ALC-1]
gi|159877731|gb|EDP71788.1| hypothetical protein FBALC1_04852 [Flavobacteriales bacterium
ALC-1]
Length = 1007
Score = 39.0 bits (88), Expect = 0.63, Method: Composition-based stats.
Identities = 29/249 (11%), Positives = 69/249 (27%), Gaps = 21/249 (8%)
Query: 39 ERQSSRDVYLDSVTDVRYQREVYEK-----AVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93
+ + L + + Y+K + E + +A + FN ++
Sbjct: 402 SKNYKEAIELLKGKNSFENKVAYQKVAFFRGIELYNETKYREALDLFNSSLKEPREPIFV 461
Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153
K+ A +Y+ Y A +++ S + + Y +
Sbjct: 462 AKATFWKAETEYNLSNYNDALIGFKQFNGLAESSDLPERDNLDYNLGYTYFKLKDYSNAS 521
Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP-- 211
+ N Y++ A + + Q A + + A+
Sbjct: 522 KYFQKFIDKNSSDRLRRNDAYLRVADGHFVSSKYQSAISAYDKAIQINEIETDYASFQVA 581
Query: 212 --------------RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
+ + Y + ++AM L +YV D+A ++ + Y
Sbjct: 582 MSHGYLGKSSTKTSELKTFIEGYPKSALRDDAMYELANSYVKSNDTDKAMQMYDRLNSEY 641
Query: 258 PQGYWARYV 266
+ +
Sbjct: 642 RRSAFTSKA 650
Score = 36.7 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 28/241 (11%), Positives = 64/241 (26%), Gaps = 20/241 (8%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
L + L IF ++ + + Y+KA+ + + A
Sbjct: 4 LKRQVLIIFLLVSSHAIA------------QKSAIYTSDLQDYQKALTLYNNKQYKAAQS 51
Query: 79 YFNQCSRDFPF----AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
F+ + + A + + + A + E + + +D
Sbjct: 52 LFDDIKYNTSDVTIKSDCAYYIANCAVRLNQNNADDLIAEFVEEYPTSTKRNTAFLDVAD 111
Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
Y S R + R Y S Y G++ T N++ +
Sbjct: 112 YYFENSKYAYARKWYDKVEERSIARSERDRFNFNYGYSFYATGSKNQATKYLNRVVNSQE 171
Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANY----SDAEHAEEAMARLVEAYVALALMDEAREVV 250
+ G + + + ++ E+ + L ++A E+
Sbjct: 172 YGSQAKYYIGYMAYEGDDYDTANEYFDQVSDNEKYKEKLSYYQADLNFKLGKFEKAIELA 231
Query: 251 S 251
Sbjct: 232 E 232
Score = 36.7 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 23/206 (11%), Positives = 56/206 (27%), Gaps = 23/206 (11%)
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
Y + K +++S A +YF + + R + + +Y
Sbjct: 505 YNLGYTYFKLKDYSNASKYFQKFIDKNSSDRLRRNDAYLRV---------ADGHFVSSKY 555
Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
+ + + + + + + +E Y S A +
Sbjct: 556 QSAISAYDKAIQINEIETDYASFQVAMSHGYLGKSSTKTSELKTFIEGYPKSALRDDAMY 615
Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
E+ Y+K + A+ + + + Y + +A+ R Y
Sbjct: 616 --------------ELANSYVKSNDTDKAMQMYDRLNSEYRRSAFTSKALLRQGLVYYNS 661
Query: 241 ALMDEAREVVSLIQERYPQGYWARYV 266
+ A + + +P A
Sbjct: 662 NENERALSKFKKVAKDFPASGEAVQA 687
>gi|156740544|ref|YP_001430673.1| TPR repeat-containing serine/threonine protein kinase [Roseiflexus
castenholzii DSM 13941]
gi|156231872|gb|ABU56655.1| serine/threonine protein kinase with TPR repeats [Roseiflexus
castenholzii DSM 13941]
Length = 880
Score = 39.0 bits (88), Expect = 0.63, Method: Composition-based stats.
Identities = 19/224 (8%), Positives = 49/224 (21%), Gaps = 22/224 (9%)
Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
+++ A F++ P A + A+L +
Sbjct: 660 GWNLYYLDDYAGAVAEFDKALSINPQDTDAHLGKSYALLAFSPPDYDGAIATLEQAIAIT 719
Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT------------- 170
+ + + + ++R
Sbjct: 720 PYRPDLFARLGWTHMSKGFSLPSGSSEQTSTYQRAEDRFREALDRNDRFVSALTGLGWAQ 779
Query: 171 ----NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
++ A +G Y +G + A F+ + +
Sbjct: 780 SALGQYEQALDTLQQSLAIKDDQADAHFGVGWTYYNQGRFNDAEVSFRRAIEIAPNDGGN 839
Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
L L ++EA++ E+ +A+ +
Sbjct: 840 ---YYWLGLTLEQLGRVEEAKQAYRTAVEK--GSRFAQQELDRL 878
>gi|332674077|gb|AEE70894.1| paralysed flagella protein [Helicobacter pylori 83]
Length = 803
Score = 39.0 bits (88), Expect = 0.64, Method: Composition-based stats.
Identities = 8/53 (15%), Positives = 15/53 (28%)
Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
NY E + + +A +A I Y +A + +
Sbjct: 262 KNYPTDPSIPEVLYYVAKALDENNNYKQAMRYYKRILLEYKDSRYAPLAQMRL 314
>gi|330815666|ref|YP_004359371.1| hypothetical protein bgla_1g07230 [Burkholderia gladioli BSR3]
gi|327368059|gb|AEA59415.1| hypothetical protein bgla_1g07230 [Burkholderia gladioli BSR3]
Length = 249
Score = 39.0 bits (88), Expect = 0.64, Method: Composition-based stats.
Identities = 16/111 (14%), Positives = 30/111 (27%)
Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
+ S + R + V + G++ A F+
Sbjct: 94 RQQRDGYSDLDTRLKKFEPQQTTVDGVEGTVQPGETDAFNAASQQFRAGDFKGAAASFRA 153
Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
+A Y + + A L A AL + + + +PQ A
Sbjct: 154 FIAKYPQSPYQPVAQYWLGNAQYALRDYKGSTATWQALVKAFPQHPRAGDA 204
>gi|310779067|ref|YP_003967400.1| TPR repeat-containing protein [Ilyobacter polytropus DSM 2926]
gi|309748390|gb|ADO83052.1| TPR repeat-containing protein [Ilyobacter polytropus DSM 2926]
Length = 948
Score = 39.0 bits (88), Expect = 0.64, Method: Composition-based stats.
Identities = 27/211 (12%), Positives = 63/211 (29%), Gaps = 4/211 (1%)
Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
A + ++F A + + + S + Y + A ++ +
Sbjct: 697 ADANMASEDFQGAIATYKELYDTIEDENLKENSASKLTEIYYQSNNLDDALLWADKIPVK 756
Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
S Y G + + + Y + ++Y
Sbjct: 757 NKSSYWKAITYDKKGEVDLAHTEYKKLLEDEKYRDRAAFNLANYYFKKENYAESKKYYEI 816
Query: 184 VGRNQLAAKEVEIGRY----YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
V ++ + + Y K +Y A+ F V Y D+ E ++ ++ Y A
Sbjct: 817 VDKSSESQYKDTAAFQLGVIYEKEEDYNNALRMFTKVNLLYKDSPLKESSVIKIAVVYEA 876
Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETLV 270
L EA++ + + Y + + + +
Sbjct: 877 LGDEKEAKKSYNDFLDEYKESKFKDFALEKL 907
Score = 38.2 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 26/258 (10%), Positives = 67/258 (25%), Gaps = 27/258 (10%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
K LTI + V V + + Y+D K +N+ A
Sbjct: 1 MKKKLTIMAFLIVLNTVSFAGEKEDIKYIDE----------------LYKSKNYKVAVLE 44
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
+++P + + A + ++++ + + Y + +Y
Sbjct: 45 LEGFLKNYPKSKYVKTIQERLAKTYFLEKNHEKSKKYFDILLANYRLKRKEKNEFYYYQT 104
Query: 140 SYA-----------QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
+ K + + + + ++ N
Sbjct: 105 INCAYLRNFEDAIVYQKNLDVKSEYYDKAIYELGKEYYKSGEYNKAQTELSKLLSSKGNY 164
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
+ + G+YV +I + ++ Y + + +A
Sbjct: 165 YDEGILYLALSSYNNGQYVKSIVYLDEYYNGTEEDKNYPLMNYIYGSCYYKMDDIAKAEG 224
Query: 249 VVSLIQERYPQGYWARYV 266
+ YP+ +A+
Sbjct: 225 YFKEVAANYPENTYAQRS 242
>gi|308064052|gb|ADO05939.1| paralysed flagella protein [Helicobacter pylori Sat464]
Length = 803
Score = 39.0 bits (88), Expect = 0.64, Method: Composition-based stats.
Identities = 8/53 (15%), Positives = 15/53 (28%)
Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
NY E + + +A +A I Y +A + +
Sbjct: 262 KNYPTDPSIPEVLYYVAKALDENNNYKQAMRYYKRILLEYKNSRYAPLAQMRL 314
>gi|242279843|ref|YP_002991972.1| SpoIID/LytB domain protein [Desulfovibrio salexigens DSM 2638]
gi|242122737|gb|ACS80433.1| SpoIID/LytB domain protein [Desulfovibrio salexigens DSM 2638]
Length = 538
Score = 39.0 bits (88), Expect = 0.64, Method: Composition-based stats.
Identities = 16/65 (24%), Positives = 28/65 (43%), Gaps = 2/65 (3%)
Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
A +++V NY D +A+ A+ RL Y + D A V +P+G +
Sbjct: 96 PEKAADVYRMVGRNYPD--YADTALYRLGFLYYQMDRYDRANSVFRQYLRYFPKGKFKYQ 153
Query: 266 VETLV 270
E ++
Sbjct: 154 AEAVI 158
>gi|157736844|ref|YP_001489527.1| hypothetical protein Abu_0591 [Arcobacter butzleri RM4018]
gi|157698698|gb|ABV66858.1| conserved hypothetical membrane protein [Arcobacter butzleri
RM4018]
Length = 226
Score = 39.0 bits (88), Expect = 0.64, Method: Composition-based stats.
Identities = 34/198 (17%), Positives = 72/198 (36%), Gaps = 7/198 (3%)
Query: 30 IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89
A G +S ++ + Y K + + + +A + + +
Sbjct: 24 CATFVFTGCSSKSEQEY-------NKPALYWYNKMMKQIASGDLDEADDTYTSLESEHRN 76
Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
+ ++++ +Y A +EYI ++ SK++DY YL + +
Sbjct: 77 SPYIPTAIMILVNAHIEEEEYALANFYLDEYIKKFGLSKDIDYARYLKIKANFLGFKYQF 136
Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
DQ+ L + E+Y NSPY+ + A+ + EI Y +R + +
Sbjct: 137 RDQQLIDDTLSQIQEFKEKYKNSPYMPLVDTINSRLYMSKASFDQEISELYTRRDKPLGT 196
Query: 210 IPRFQLVLANYSDAEHAE 227
+ V ++ D+ E
Sbjct: 197 EFYEEKVRGSWVDSSEIE 214
>gi|154484615|ref|ZP_02027063.1| hypothetical protein EUBVEN_02331 [Eubacterium ventriosum ATCC
27560]
gi|149734463|gb|EDM50380.1| hypothetical protein EUBVEN_02331 [Eubacterium ventriosum ATCC
27560]
Length = 476
Score = 39.0 bits (88), Expect = 0.64, Method: Composition-based stats.
Identities = 11/99 (11%), Positives = 28/99 (28%), Gaps = 4/99 (4%)
Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE----EAMA 231
+ + TV + + I G + + + A+ +A+
Sbjct: 348 MDSEDFTTVYKWLSSKLSKRISEEAYNAGMTARDKADYDTAIKQFKKCIEADSGNVDAIY 407
Query: 232 RLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
L +Y A + I + +P ++ +
Sbjct: 408 YLAWSYKNKGDSKNANKYFKEIYDNFPNSSHYDTAKSQL 446
>gi|330969298|gb|EGH69364.1| peptidase aspartic, active site protein [Pseudomonas syringae pv.
aceris str. M302273PT]
Length = 654
Score = 39.0 bits (88), Expect = 0.64, Method: Composition-based stats.
Identities = 32/251 (12%), Positives = 65/251 (25%), Gaps = 21/251 (8%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
K + + L Q+ + + +A + +++ A
Sbjct: 1 MKRPFILSLLVTGLSLSSPFSQAET----LPLPLTGPAYAIANEAYMAYNRKDYDLAIAK 56
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
N+ R A R + ++ +Y Q+A + Y
Sbjct: 57 ANEALRQRGDAQQLRDLITLAERDKYRRDHPQRAYKTRPQPGYLEGNQALRAYANRDYDG 116
Query: 140 SYAQ------MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA-------RFYVTVGR 186
S + + LQ + E + A +
Sbjct: 117 SASHARKAIAQAPKNLDYRMMLIEALQRQQHLDEAQAAINDAEQALGPQQVLTRRRQAIQ 176
Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
Q+A + G L RG+ A+ + + ++ + LV A +A EA
Sbjct: 177 EQVAVDKAATGYKALARGDNDTAVSEAREAVRSFPKQMAYRK---LLVSALIAQGQYAEA 233
Query: 247 REVV-SLIQER 256
R +
Sbjct: 234 RSAATEALALN 244
>gi|189218837|ref|YP_001939478.1| TPR repeats containing protein [Methylacidiphilum infernorum V4]
gi|189185695|gb|ACD82880.1| TPR repeats containing protein [Methylacidiphilum infernorum V4]
Length = 771
Score = 39.0 bits (88), Expect = 0.64, Method: Composition-based stats.
Identities = 30/221 (13%), Positives = 58/221 (26%), Gaps = 21/221 (9%)
Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
S + S + Y A LK++ +A YF + +
Sbjct: 566 CSYVQSYEDNYKSGAETIPTELYYWIASQLLKKEKREQAALYFKKVVQS----------- 614
Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
+ ++ E K +++ Q L
Sbjct: 615 ----------ANPKDKYYSSSLWLLAETERKLMNWKEANTYYLEFQKSDPNSASNSPVLL 664
Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
L + ++ + A + IG YL + Y A + +
Sbjct: 665 GLAETQIALGQFAEAQKNLEEVMLKEPEGENNAKARMLIGDSYLAQKNYREAAKAYTTLS 724
Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
Y D AM + ++ D+A ++E+YP
Sbjct: 725 LIYQDDHITPRAMQKAALSFSKAGDNDQAAFWEKKLKEKYP 765
Score = 37.1 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 26/245 (10%), Positives = 67/245 (27%), Gaps = 17/245 (6%)
Query: 43 SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102
+ + TD + + VL + S A E + ++P + + +
Sbjct: 459 KEVLQALNKTDPERETCLEHVGVLAFDLKEESLAAETMLKVLNEYPHSPYRGIAAWIVGQ 518
Query: 103 VQYSAGKYQQAASLGEEYI-------------TQYPESKNVDYVYYLVGMSYAQMIRDVP 149
+Y +Y+ A + + V L +
Sbjct: 519 HKYEEKQYEAAKEYFSLAREAEPEKLYLAATLMLAWIAYHQGDVEKLCSYVQSYEDNYKS 578
Query: 150 YDQRATKLMLQYMSRIVERYTNSP----YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
+ + +++ + + Y K ++ + K
Sbjct: 579 GAETIPTELYYWIASQLLKKEKREQAALYFKKVVQSANPKDKYYSSSLWLLAETERKLMN 638
Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
+ A + + ++ + L E +AL EA++ + + + P+G
Sbjct: 639 WKEANTYYLEFQKSDPNSASNSPVLLGLAETQIALGQFAEAQKNLEEVMLKEPEGENNAK 698
Query: 266 VETLV 270
L+
Sbjct: 699 ARMLI 703
Score = 36.3 bits (81), Expect = 5.0, Method: Composition-based stats.
Identities = 7/40 (17%), Positives = 15/40 (37%)
Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
EA+ + + Y + EA + L+ + P +
Sbjct: 71 EALFSMADCYRLIGKKAEAIRIYQLLIQNDPSSAFVPTAY 110
>gi|77460621|ref|YP_350128.1| hypothetical protein Pfl01_4400 [Pseudomonas fluorescens Pf0-1]
gi|77384624|gb|ABA76137.1| putative exported protein [Pseudomonas fluorescens Pf0-1]
Length = 279
Score = 39.0 bits (88), Expect = 0.64, Method: Composition-based stats.
Identities = 18/111 (16%), Positives = 38/111 (34%), Gaps = 1/111 (0%)
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI-GRYYLKRGEYVAAIPRFQLVLANY 220
I + + A F +Q A G L +G+ A F V Y
Sbjct: 167 FDLIKAKDFDKASQAFAAFLRKYPNSQYAGNAQYWLGEVNLAKGDLQGAGQAFAKVSQLY 226
Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+++ +L + L D+ + ++ + +YP A+ + ++
Sbjct: 227 PKHAKVPDSLYKLADVERRLGHTDKVKGILQQVVAQYPGTSAAQLAQRDLQ 277
Score = 37.1 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 31/83 (37%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
D ++ Y+ A +K ++F KA + F R +P + A + V + G
Sbjct: 152 EPADPAKEKLYYDAAFDLIKAKDFDKASQAFAAFLRKYPNSQYAGNAQYWLGEVNLAKGD 211
Query: 110 YQQAASLGEEYITQYPESKNVDY 132
Q A + YP+ V
Sbjct: 212 LQGAGQAFAKVSQLYPKHAKVPD 234
Score = 35.5 bits (79), Expect = 8.6, Method: Composition-based stats.
Identities = 13/67 (19%), Positives = 28/67 (41%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ +K ++ A F L Y ++++A A L E +A + A + +
Sbjct: 162 YYDAAFDLIKAKDFDKASQAFAAFLRKYPNSQYAGNAQYWLGEVNLAKGDLQGAGQAFAK 221
Query: 253 IQERYPQ 259
+ + YP+
Sbjct: 222 VSQLYPK 228
>gi|78223606|ref|YP_385353.1| tetratricopeptide TPR_4 [Geobacter metallireducens GS-15]
gi|78194861|gb|ABB32628.1| Tetratricopeptide TPR_4 [Geobacter metallireducens GS-15]
Length = 267
Score = 39.0 bits (88), Expect = 0.64, Method: Composition-based stats.
Identities = 25/193 (12%), Positives = 47/193 (24%), Gaps = 6/193 (3%)
Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
E+ K + + +++ A F +C P L + + + G
Sbjct: 6 DELLAKGISLAEAGDYTGAAAQFRECVEREPDNAEGYFYLGEALSEEGKLQDALKEYEKG 65
Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD---QRATKLMLQYMSRIVERYTNSPY 174
+ ++ Y + + + + +
Sbjct: 66 LKLAPDDLDALTAVGDIKFELGQYKEALAAYQRVVALDPDNSDAHVNIGLVYNSLERTQK 125
Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234
A +G + E+ AI FQ + D A L
Sbjct: 126 AIKAFEKALEIDPANVFAYNGLGDAWYGLDEHEKAIAAFQKGIELDPDDAA---AHFNLG 182
Query: 235 EAYVALALMDEAR 247
E Y L DEA
Sbjct: 183 ELYYDLGEHDEAE 195
>gi|298207339|ref|YP_003715518.1| hypothetical protein CA2559_03770 [Croceibacter atlanticus
HTCC2559]
gi|83849975|gb|EAP87843.1| hypothetical protein CA2559_03770 [Croceibacter atlanticus
HTCC2559]
Length = 593
Score = 39.0 bits (88), Expect = 0.65, Method: Composition-based stats.
Identities = 26/257 (10%), Positives = 80/257 (31%), Gaps = 10/257 (3%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLK-------EQNF 73
K T+ IA + ++++ + + + +++A + + ++ F
Sbjct: 329 KSIETMSLQIAYANFLAFKKEQTASAISTLKNLLDQDKNRFQEATIKMALADILVLDEKF 388
Query: 74 SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
++A Y++Q +++++ A Y G + + + + + D +
Sbjct: 389 NQALIYYSQIQNIVKNNTLSQEARFKVAKTSYYKGDFSWSETQLDVLKASASQLIANDAM 448
Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
+ + + K + + + V G
Sbjct: 449 ELSLLIKDNSLED--STQTALKKFAKADLLTFKGKNEAAIAVLEEILIQHKGEKIEDEAL 506
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY-VALALMDEAREVVSL 252
+ +++ E+ A ++ ++ Y ++A L + Y LA ++A+
Sbjct: 507 LRQANLFIEAKEFEKAEANYKKIITFYPTDILGDDAYYGLAKLYDEHLARPEDAKANYEK 566
Query: 253 IQERYPQGYWARYVETL 269
+ Y +
Sbjct: 567 VIFDYADSIFYVDARKR 583
>gi|257456228|ref|ZP_05621425.1| TPR domain protein [Treponema vincentii ATCC 35580]
gi|257446314|gb|EEV21360.1| TPR domain protein [Treponema vincentii ATCC 35580]
Length = 1124
Score = 39.0 bits (88), Expect = 0.65, Method: Composition-based stats.
Identities = 22/220 (10%), Positives = 61/220 (27%), Gaps = 6/220 (2%)
Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
Y A + L+ ++A + + + ++ + +
Sbjct: 905 DTDPVTYYNLASVQLELNKTAEALQNAQKALASNDKDARFLYTYGLALEKSNRLHEAEDY 964
Query: 114 ASLGEEYITQYPESKNV---DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
+ +Y + + + S Q + + + + + ++
Sbjct: 965 YTRAIAADGKYGKPRINLGRIQLEAGHLDSAEQHLLAGYRAESSNFEVNMNLGKLYGLKK 1024
Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
+ + YL G A +Q ++ A ++
Sbjct: 1025 QYGKAIDYYTNAIKIMPKDVDARQNLAAVYLSAGLKENARDTYQALIKMNP---QAWDSY 1081
Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
L + Y++L EA+ + + ++ P A V L+
Sbjct: 1082 YELGKVYISLDNKAEAKAIFEQLLKQRPNYRNAAEVRKLL 1121
>gi|237756217|ref|ZP_04584781.1| Tetratricopeptide repeat family protein [Sulfurihydrogenibium
yellowstonense SS-5]
gi|237691627|gb|EEP60671.1| Tetratricopeptide repeat family protein [Sulfurihydrogenibium
yellowstonense SS-5]
Length = 964
Score = 39.0 bits (88), Expect = 0.65, Method: Composition-based stats.
Identities = 28/216 (12%), Positives = 53/216 (24%), Gaps = 5/216 (2%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
V D KA+ + KA Y + + +
Sbjct: 451 VKDFVKAERFLNKALESKDSEIKKKALMYLAEIYLMNKDDENFVNTASQLKEFDKTYAYD 510
Query: 111 QQAASLGEEYITQYPESKNVD--YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
Q D + R + + + +
Sbjct: 511 LLGWYFYLNGDYQNAFKAFKDPYMKAVSAFNAGDLEAVKNIIQNRNDRKSKFLLVYVYIK 570
Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVE-IGRYYLKRGEYVAAIPRFQLVLANYS--DAEH 225
+ + + G + +A K + G++V A F L Y D +
Sbjct: 571 ENDLEKAREVLRELLNGDDLIAKKAYYLYAYTFFSSGDFVRASQEFSKFLEKYKNDDDIY 630
Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
+A+ RL ++Y L D A + +Y
Sbjct: 631 TRKALLRLADSYYNLGERDLAVNIYKDFITKYSGTK 666
>gi|147676599|ref|YP_001210814.1| hypothetical protein PTH_0264 [Pelotomaculum thermopropionicum SI]
gi|146272696|dbj|BAF58445.1| hypothetical membrane protein [Pelotomaculum thermopropionicum SI]
Length = 927
Score = 39.0 bits (88), Expect = 0.65, Method: Composition-based stats.
Identities = 12/96 (12%), Positives = 29/96 (30%)
Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
+ + + Y + + ++ Y ++ + IP ++
Sbjct: 407 QEAGEKYPQSYLARGIKAYEEVRGEPYFEMERRKQQGNWDVYFYGDEQYDPEREIPGWEK 466
Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
LA + A++A RL Y +A +
Sbjct: 467 FLAEFPGHPGADDAAYRLARCYEIEGRWTDALNTLR 502
Score = 37.5 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 25/202 (12%), Positives = 54/202 (26%), Gaps = 13/202 (6%)
Query: 71 QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
+ A E + +G + +A + Q +
Sbjct: 610 KKQQAAVEELAALEVQWKKSGNPAD-----LYRLAAAIFHDQTLYYNHLWSGWRQSYNWQ 664
Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER-YTNSPYVKGARFYVTVGRNQL 189
Y+ + + L Y ++ ++ A + + L
Sbjct: 665 GYINATGRGRAPVEMASFAREMINYNHCLPYFQQVYRDPSSSPELKARALYSAGLCYTGL 724
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
V+ + I +Q + Y + A++A+ +AL
Sbjct: 725 DEWGVDAYLAFTPSEIREKIISIYQQFIREYPGSSMADDAL-------LALGAYTGDAGY 777
Query: 250 VSLIQERYPQGYWARYVETLVK 271
+ I E YPQG + L++
Sbjct: 778 LQKIVEDYPQGDMLEKAKNLME 799
>gi|66044282|ref|YP_234123.1| peptidase aspartic, active site [Pseudomonas syringae pv. syringae
B728a]
gi|63254989|gb|AAY36085.1| Peptidase aspartic, active site [Pseudomonas syringae pv. syringae
B728a]
Length = 654
Score = 39.0 bits (88), Expect = 0.65, Method: Composition-based stats.
Identities = 32/251 (12%), Positives = 66/251 (26%), Gaps = 21/251 (8%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
K + + L Q+ + + +A + +++ A
Sbjct: 1 MKRPFILSLLVTGLSLSSPFSQAET----LPLPLTGPAYAIANEAYMAYNRKDYDLAIAK 56
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
N+ R A R + ++ +Y Q+A + Y
Sbjct: 57 ANEALRQRGDAQQLRDLITLAERDKYRRDHPQRAYKTRPQPGYLEGNRALRAYANRDYDG 116
Query: 140 SYAQ------MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA-------RFYVTVGR 186
S + + LQ R+ + + A +
Sbjct: 117 SASHARKAIAQAPKNLDYRMMLIEALQRQQRLDQAQAAINDAEQALGPQQVLTRRRQAIQ 176
Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
Q+A + G L RG+ A+ + + ++ + LV A +A EA
Sbjct: 177 EQVAVDKAATGYKALARGDNDTAVSEAREAVRSFPKQMAYRK---LLVSALIAQGQYAEA 233
Query: 247 REVV-SLIQER 256
R +
Sbjct: 234 RSAATEALALN 244
>gi|33865807|ref|NP_897366.1| TPR domain containing protein [Synechococcus sp. WH 8102]
gi|33632977|emb|CAE07788.1| possible-TPR Domain containing protein [Synechococcus sp. WH 8102]
Length = 781
Score = 39.0 bits (88), Expect = 0.65, Method: Composition-based stats.
Identities = 23/210 (10%), Positives = 53/210 (25%), Gaps = 6/210 (2%)
Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99
++ + +A+ N KA + + + + +L
Sbjct: 6 SDKRNKANKSRAKIIKQGEALAREAIKHHVNGNLKKAEMAYKEIINSGLQSPIIFSNLGA 65
Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD---QRATK 156
+ + ++ ++ + Y Y Q + +
Sbjct: 66 ICQTNGRTEEAIAFYKNAIKIDQRHHDAFSNLGALYKDLGQYNQALDATVKSLKLKPDNP 125
Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
+ L + I + A A + +G Y++ G A+
Sbjct: 126 IALLNLGSIYKDLGKLDQALTATVKSIEQNPNSADSFINLGSIYIELGNLDQALASTLKS 185
Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEA 246
L A+ L Y L +D+A
Sbjct: 186 LELNPGNPI---ALMNLGSIYRDLGNLDQA 212
>gi|325475183|gb|EGC78368.1| hypothetical protein HMPREF9353_00382 [Treponema denticola F0402]
Length = 441
Score = 39.0 bits (88), Expect = 0.66, Method: Composition-based stats.
Identities = 21/251 (8%), Positives = 61/251 (24%), Gaps = 14/251 (5%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDV---YLDSVTDVRYQREVYEKAVLFLKEQ---- 71
+ K + + + + G +S ++ + + +++EKA +
Sbjct: 1 MKKIISVLSIAALLLAISGCGGKSEKNNTVLKVIKEAEGMTLDQLFEKAYQESNGKVLKG 60
Query: 72 -----NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126
A E F + + + ++ E+ +
Sbjct: 61 LGNSSRGKTAGETFVEAMKAKYPDYTGKIDWSQPKNNTIFDQLTNDNKNVNPEFSMTLIQ 120
Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
+ + + T + ++ +
Sbjct: 121 DGAQIKAKMIDTGILHNFVPKEWKESAGTDMKENGNPLALQTLSKVFMYNNVEASNKFLN 180
Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD-AEHAEEAMARLVEAYVALALMDE 245
KE + + E + L YS + A +A+ ++Y ++D
Sbjct: 181 VWDFVKEGQSPLFMGLESEPIGKNFLLMLTHEKYSKVVKAAYDALPEADKSYFKP-IVDG 239
Query: 246 AREVVSLIQER 256
+ +
Sbjct: 240 LEKTAKELGLN 250
>gi|296124041|ref|YP_003631819.1| hypothetical protein Plim_3808 [Planctomyces limnophilus DSM 3776]
gi|296016381|gb|ADG69620.1| hypothetical protein Plim_3808 [Planctomyces limnophilus DSM 3776]
Length = 361
Score = 39.0 bits (88), Expect = 0.66, Method: Composition-based stats.
Identities = 27/233 (11%), Positives = 59/233 (25%), Gaps = 25/233 (10%)
Query: 41 QSSRDVYLDSVTDVRYQREVYE-------KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93
D + + Y+ A L + + +F +A + +
Sbjct: 142 SKVDDAIKELKGIQASDPDFYQFFPSVILLADLLVNKGSFDEAAKVLESFEGVTDSS--- 198
Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153
K Q + +G + Q + V ++ S
Sbjct: 199 --------------LKLQGRSYVGRVLLAQGKIPQAVTAFDEVISASGDDQTLAPRKLDA 244
Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213
+ + A ++ G + + A+ +
Sbjct: 245 MVGKAKAAIQQNKYAEALPLLDDVMLNMTEASAATGAECKLLQGNCLQALNKPMEAVLAY 304
Query: 214 QLVLANYSD-AEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
V NY + + EA+ L + + D E + ++ YP WA+
Sbjct: 305 LYVDLNYPNESGARAEALYHLAGLWRVIQHPDRGLEARARLEADYPASPWAKK 357
>gi|225707240|gb|ACO09466.1| FK506-binding protein 4 [Osmerus mordax]
Length = 448
Score = 39.0 bits (88), Expect = 0.66, Method: Composition-based stats.
Identities = 28/234 (11%), Positives = 59/234 (25%), Gaps = 14/234 (5%)
Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQN---------FSKAYEYFNQCSRDFPFA 90
+ + ++ + Y+ V+++ L + KA Q
Sbjct: 159 SKPNEGAAVEVTLEGSYEGRVFDQRELKFEVGERESLGLPIGVEKALMAMEQGEESLFTI 218
Query: 91 GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150
+ G + + ES ++ L + + +
Sbjct: 219 KPKYGYGNTGSTKFDIPGGATLQYKIKLTNFEKAKESWEMNTSEKLEQSAIVKDKGTQYF 278
Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
+ + RIV N + A + + +
Sbjct: 279 KEGKYRQASVQYKRIVSWLENESNLVDGEEQKAKALRLAAHLNLAMCFL-----KLQEPS 333
Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
+ E E+A+ R EA A+ D AR + + YP A+
Sbjct: 334 HTLENCDKAMELDEANEKALFRRGEALFAMKEFDRARGDFQRVTQLYPGNKAAK 387
>gi|83645407|ref|YP_433842.1| hypothetical protein HCH_02627 [Hahella chejuensis KCTC 2396]
gi|83633450|gb|ABC29417.1| uncharacterized protein conserved in bacteria [Hahella chejuensis
KCTC 2396]
Length = 933
Score = 39.0 bits (88), Expect = 0.66, Method: Composition-based stats.
Identities = 19/196 (9%), Positives = 48/196 (24%), Gaps = 14/196 (7%)
Query: 65 VLFLKEQNF-SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
+ ++ S A + + + + + + + + + I
Sbjct: 272 KAAIALGDYRSLAPKLYAALYNYYLQRERYQDASASAQAYIAAYPAATDRSDFHDRIIAA 331
Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
Y + + ++ Y + + + + + Y+
Sbjct: 332 YEQGGLPSLAWEEKARFTRELGLASNYWRSQQETAKTRLRPSLYQ-----YLDDLGQREY 386
Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243
+ A +R A+ F + + EA+ EAY L
Sbjct: 387 ALGLKAA--------GVERRTHLQNAVAYFDGMEEIFPSEGKTAEALYLQGEAYFLLEEW 438
Query: 244 DEAREVVSLIQERYPQ 259
+ A YP
Sbjct: 439 ELAVRAYDKAGYFYPD 454
Score = 37.5 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 11/74 (14%), Positives = 27/74 (36%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ + + AI ++ +L + + + +L A L D+A +
Sbjct: 95 YDAKPQGLIDDDIWNIAIESYEALLQRQPGDKGNDRVLYQLARANGMLGQTDKALISLER 154
Query: 253 IQERYPQGYWARYV 266
+ +YP+ +A
Sbjct: 155 LVGQYPRSGYATEA 168
>gi|317181000|dbj|BAJ58786.1| paralysed flagella protein [Helicobacter pylori F32]
Length = 803
Score = 39.0 bits (88), Expect = 0.67, Method: Composition-based stats.
Identities = 8/53 (15%), Positives = 15/53 (28%)
Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
NY E + + +A +A I Y +A + +
Sbjct: 262 KNYPTDPSIPEVLYYVAKALDENNNYKQAMRYYKRILLEYKNSRYAPLAQMRL 314
>gi|295131940|ref|YP_003582616.1| hypothetical protein ZPR_0057 [Zunongwangia profunda SM-A87]
gi|294979955|gb|ADF50420.1| protein containing tetratricopeptide region [Zunongwangia profunda
SM-A87]
Length = 844
Score = 39.0 bits (88), Expect = 0.67, Method: Composition-based stats.
Identities = 30/228 (13%), Positives = 69/228 (30%), Gaps = 1/228 (0%)
Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
D LD V R ++ + A ++ + K E + +
Sbjct: 404 DKNDSILDLVKLPREEQIAFYTAYTDKLKEGYQKEIEAGEAQAALALNTAGPGVPNIGVP 463
Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
+ ++ Y + + ++ + D+ +
Sbjct: 464 VEENASKFYFYSENRINRGEREFLRIWGNRELADNWRWMATGNTGINTQDEDSIAEFDFS 523
Query: 162 MS-RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220
R + ++ ++ A Y K GEY A+ R + VLA+
Sbjct: 524 SDPRFDPLTYVEKLPTDNKVIDSLYEDRNYAYYQLGLIYNEKFGEYQLAVDRLEQVLASN 583
Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
+ + L +AY L ++++ + + I YP +A +++
Sbjct: 584 PEDRLILPSKYNLYKAYGRLNMLNQQDRMKNDIISNYPNSQYAVFIQN 631
Score = 37.1 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 27/252 (10%), Positives = 66/252 (26%), Gaps = 7/252 (2%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ +F F I + ++ R+ + + +Y L L+ +
Sbjct: 1 MRRFTQAFFIFILLGAIISCSRKKDTFISRSWHSVTAEYNTLYN-GNLALETGR--EELN 57
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+ + + + A Q
Sbjct: 58 QNYRDNYWDVLPIERMQIDEEILLPDSIRNQNFGVAEQKAVKAIQRHSMLIAGEEKNPQI 117
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
++ Y + L+ + I++RY S ++ A+ + +L V I
Sbjct: 118 DEAYMLLGKARYFDQRFIPALEAFNYILQRYPASNSIRNAQIWREKTNIRLENNRVAIKN 177
Query: 199 YYLKRGEYVAAIPRF----QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
+ + Y + ++ + A+A L A +E ++
Sbjct: 178 LKRIIENSQFEDQEYADAKAAIAQAYINLKYPDSALAPLTTAANFTKKNEEKGRYFFILG 237
Query: 255 ERYPQGYWARYV 266
+ Y Q +
Sbjct: 238 QLYNQLNQPKNA 249
>gi|317052770|ref|YP_004113886.1| tetratricopeptide repeat-containing protein [Desulfurispirillum
indicum S5]
gi|316947854|gb|ADU67330.1| Tetratricopeptide TPR_1 repeat-containing protein
[Desulfurispirillum indicum S5]
Length = 1018
Score = 39.0 bits (88), Expect = 0.67, Method: Composition-based stats.
Identities = 25/203 (12%), Positives = 57/203 (28%), Gaps = 14/203 (6%)
Query: 72 NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
F A + + +P + +++ + G A E +
Sbjct: 264 QFRDAITVYEKAIDLYPGSRFVPRAIYGIGQSYEALGNPAAAKFHYEMIPSPIVNEYIGP 323
Query: 132 --------------YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
+ M + + A + + + + ++ Y
Sbjct: 324 ALLAVARLELEQDSVRGAIEAMETLLQYDEDHWRMEALRQLTRLEFKADHYQRSADYFTR 383
Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
+ + +E + Y + GE A Q V+ Y + A +A L +
Sbjct: 384 LQNEYSELFTFDPQLLLEAAQSYHQVGELRKAAWNLQRVINVYPHFDGAAKAFLELATIH 443
Query: 238 VALALMDEAREVVSLIQERYPQG 260
+ D A+ +S + +YP
Sbjct: 444 HTVGNTDLAQMFISELTGKYPDT 466
Score = 38.2 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 16/110 (14%), Positives = 37/110 (33%), Gaps = 8/110 (7%)
Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
+ + L + I+ + SP V+ A F + + +
Sbjct: 211 RQAYSYFGEGNDLQALDELLYIIREHPESPLVEEATFLLGDAYHNIPQ--------EPPG 262
Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
++ AI ++ + Y + A+ + ++Y AL A+ +I
Sbjct: 263 VQFRDAITVYEKAIDLYPGSRFVPRAIYGIGQSYEALGNPAAAKFHYEMI 312
>gi|218133792|ref|ZP_03462596.1| hypothetical protein BACPEC_01681 [Bacteroides pectinophilus ATCC
43243]
gi|217991167|gb|EEC57173.1| hypothetical protein BACPEC_01681 [Bacteroides pectinophilus ATCC
43243]
Length = 464
Score = 39.0 bits (88), Expect = 0.67, Method: Composition-based stats.
Identities = 11/51 (21%), Positives = 18/51 (35%)
Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
Y +A + YVAL + A++ I +P + T V
Sbjct: 411 YKLDSTKADAAYYSAKCYVALDQTENAKKYYQYIVTNFPTSRYISEATTYV 461
>gi|209525366|ref|ZP_03273907.1| Lytic transglycosylase catalytic [Arthrospira maxima CS-328]
gi|209494217|gb|EDZ94531.1| Lytic transglycosylase catalytic [Arthrospira maxima CS-328]
Length = 730
Score = 39.0 bits (88), Expect = 0.67, Method: Composition-based stats.
Identities = 24/221 (10%), Positives = 67/221 (30%), Gaps = 7/221 (3%)
Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
+ A + ++ ++++ +++ + + L +S + S YQ+
Sbjct: 224 QQLTPEDWENIAFGYWEKMDYAQGAIAYSKAPKTPRNMYRHARGLWLSGKIPESRRAYQE 283
Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQ----MIRDVPYDQRATKLMLQYMSRIVER 168
+ E + + + + + + V L + ++++
Sbjct: 284 LIAAFPTQTDPGGEDAGLGRIRLARLVEPREALPLLNQVVDNFPNHAAEALLERANVLDK 343
Query: 169 YTNSPYVKGARF---YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
++ +R A + + G A + ++ D+E
Sbjct: 344 LRSTETASQSRQLLLSQYSDSEPAAQLRWTLAQQGATAGRLDLASEWARQLITKNPDSEL 403
Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
A +A L +A + + RYP+ Y+A
Sbjct: 404 APQATFMLGRWARQQGNSQDATKAFEYLLARYPESYYAWRA 444
>gi|157821925|ref|NP_001100736.1| intraflagellar transport protein 88 homolog [Rattus norvegicus]
gi|149064079|gb|EDM14349.1| intraflagellar transport 88 homolog (Chlamydomonas) (predicted)
[Rattus norvegicus]
Length = 815
Score = 39.0 bits (88), Expect = 0.67, Method: Composition-based stats.
Identities = 18/214 (8%), Positives = 50/214 (23%), Gaps = 10/214 (4%)
Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
+D + K ++ KA E++ + R + + + +
Sbjct: 480 SDRYNPSALTNKGNTVFANGDYEKAAEFYKEALR--NDSSCTEALYNIGLTYKKLNRLDE 537
Query: 112 QAASLGEEYITQYPE-----SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
S + + Y + + + L + +
Sbjct: 538 ALDSFLKLHAILRNSAQVLCQIANVYELMEDPNQAIEWLMQLISVVPTDSQALSKLGELY 597
Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
+ + + +G YY+ AI F+
Sbjct: 598 DSEGDKSQAFQYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAIQYFERASLIQPTQVKW 657
Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
+ + + +A + I ++P+
Sbjct: 658 Q---LMVASCFRRSGNYQKALDTYKEIHRKFPEN 688
Score = 36.7 bits (82), Expect = 3.9, Method: Composition-based stats.
Identities = 21/203 (10%), Positives = 61/203 (30%), Gaps = 7/203 (3%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
KA+ +L++++F++A + + A + L + + + +
Sbjct: 421 NKAITYLRQKDFNQAVDTLKMFEKKDSRVKSAAATNLSFLYYLENEFAQASSYADLAVSS 480
Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVP----YDQRATKLMLQYMSRIVERYTNSPYVKG 177
+Y S + + + + + + L + ++
Sbjct: 481 DRYNPSALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYKKLNRLDEALD 540
Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
+ + A +I Y + AI +++ +A+++L E Y
Sbjct: 541 SFLKLHAILRNSAQVLCQIANVYELMEDPNQAIEWLMQLISVVPTDS---QALSKLGELY 597
Query: 238 VALALMDEAREVVSLIQERYPQG 260
+ +A + +P
Sbjct: 598 DSEGDKSQAFQYYYESYRYFPSN 620
>gi|94986989|ref|YP_594922.1| hypothetical protein LI0547 [Lawsonia intracellularis PHE/MN1-00]
gi|94731238|emb|CAJ54601.1| NA [Lawsonia intracellularis PHE/MN1-00]
Length = 113
Score = 39.0 bits (88), Expect = 0.67, Method: Composition-based stats.
Identities = 8/48 (16%), Positives = 18/48 (37%)
Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
+ + L Y+ + L D A + I +P+ W+ ++
Sbjct: 4 TSEQRQTLYILGYLYIRMGLNDSAERLFKTILSLFPEDKWSHRSLAVI 51
>gi|262372263|ref|ZP_06065542.1| conserved hypothetical protein [Acinetobacter junii SH205]
gi|262312288|gb|EEY93373.1| conserved hypothetical protein [Acinetobacter junii SH205]
Length = 287
Score = 39.0 bits (88), Expect = 0.67, Method: Composition-based stats.
Identities = 21/114 (18%), Positives = 45/114 (39%), Gaps = 13/114 (11%)
Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
K +Q M ++ + N YV A F++ ++ +Y AA + +
Sbjct: 185 KKAIQPMQNFIKNHPNGIYVGNAYFWLAEFYL------------AVEPVDYKAAKQNYNI 232
Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMD-EAREVVSLIQERYPQGYWARYVET 268
V Y ++ A A+ +L + A + + + +YPQ A++++
Sbjct: 233 VATRYPNSAKAPRAIYQLYSIAKEVDKNTALANQYKNKLISQYPQTEEAKFIQK 286
>gi|229112430|ref|ZP_04241968.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
cereus Rock1-15]
gi|228671078|gb|EEL26384.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
cereus Rock1-15]
Length = 273
Score = 39.0 bits (88), Expect = 0.67, Method: Composition-based stats.
Identities = 12/73 (16%), Positives = 23/73 (31%)
Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
+Q+ K LT S ++ L + + L + EKA L+++
Sbjct: 1 MFQMKKLLLTALISTSIFGLAACGGKDKDEKKLVVGASNVPHAVILEKAKPLLEKKGIEL 60
Query: 76 AYEYFNQCSRDFP 88
+ F
Sbjct: 61 EIKKFQDYVLPNK 73
>gi|119489134|ref|ZP_01622040.1| hypothetical protein L8106_22566 [Lyngbya sp. PCC 8106]
gi|119454883|gb|EAW36027.1| hypothetical protein L8106_22566 [Lyngbya sp. PCC 8106]
Length = 1122
Score = 39.0 bits (88), Expect = 0.67, Method: Composition-based stats.
Identities = 26/241 (10%), Positives = 67/241 (27%), Gaps = 12/241 (4%)
Query: 29 SIAVCFLVGWERQSSRDVYL-DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87
+ L+G+ ++ + E Y+ + + ++++ F
Sbjct: 144 LLLSAGLIGFSFLLNQIIQPGQKKKMTNLMNEAYDLGNYYYNLGQYDRSFKLFG--ISLG 201
Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147
+ + + +++ Q ++ + + + + + + I
Sbjct: 202 AASELEKDLIIIRTLNQRASIANDLKFYDVALSLYAQTLNISQEKSDGIESGNSLNKIGQ 261
Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
+ ++ K+ L+ +E + QL K VE +
Sbjct: 262 IFKEKSEYKVALKTFQSALEAVREPNQTRITPEEDEDKNLQLNEKVVEGEIINNLGELHN 321
Query: 208 AAIPRFQLVLANYSDAEHAEEA---------MARLVEAYVALALMDEAREVVSLIQERYP 258
Q + + A+EA + L AY + EA E Y
Sbjct: 322 QIEKYNQAIDYSRQAIALAQEASDGKIEAKALNNLGVAYKNIGKFTEALEAHKQALNIYQ 381
Query: 259 Q 259
+
Sbjct: 382 E 382
>gi|77735597|ref|NP_001029494.1| peptidyl-prolyl cis-trans isomerase FKBP4 [Bos taurus]
gi|108935840|sp|Q9TRY0|FKBP4_BOVIN RecName: Full=Peptidyl-prolyl cis-trans isomerase FKBP4;
Short=PPIase FKBP4; AltName: Full=52 kDa FK506-binding
protein; Short=52 kDa FKBP; Short=FKBP-52; AltName:
Full=FK506-binding protein 4; Short=FKBP-4; AltName:
Full=HSP-binding immunophilin; Short=HBI; AltName:
Full=Immunophilin FKBP52; AltName: Full=Rotamase;
Contains: RecName: Full=Peptidyl-prolyl cis-trans
isomerase FKBP4, N-terminally processed
gi|74354621|gb|AAI02457.1| FK506 binding protein 4, 59kDa [Bos taurus]
gi|146231792|gb|ABQ12971.1| FK506-binding protein 4 [Bos taurus]
Length = 459
Score = 39.0 bits (88), Expect = 0.67, Method: Composition-based stats.
Identities = 28/191 (14%), Positives = 56/191 (29%), Gaps = 5/191 (2%)
Query: 74 SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
KA + + + + + + + ES +
Sbjct: 205 EKAIQRMEKGEHSIVYLKPRYAFGSAGKEKFQIPPNAELKYEIHLKSFEKAKESWEMSSE 264
Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
L + + V + + K + +IV + A
Sbjct: 265 EKLEQSTIVKERGTVYFKEGKYKQAVLQYKKIVSWLEYESSFSD--EDAEKAQALRLASH 322
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+ + +LK + AAI L S+ E+ + R EA++A+ D AR +
Sbjct: 323 LNLAMCHLKLQAFSAAIENCNKALELDSN---NEKGLFRRGEAHLAVNDFDLARADFQKV 379
Query: 254 QERYPQGYWAR 264
+ YP A+
Sbjct: 380 LQLYPSNKAAK 390
>gi|222823243|ref|YP_002574816.1| hypothetical protein Cla_0202 [Campylobacter lari RM2100]
gi|222538464|gb|ACM63565.1| conserved hypothetical protein [Campylobacter lari RM2100]
Length = 329
Score = 39.0 bits (88), Expect = 0.67, Method: Composition-based stats.
Identities = 19/232 (8%), Positives = 66/232 (28%), Gaps = 4/232 (1%)
Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
+ + + ++T Y + ++E+N + + ++ + S
Sbjct: 94 SLEETYQNFDANITQEIQNLRAYVEENRQIQEKNHQEIQKVLSEITTLINKINDDYISKE 153
Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL- 157
+ P + + ++ + + K
Sbjct: 154 DMNKTISFFQSEIARVQSQTKITPVVPIVSDDNKTEEVIQDVNETQDEVIEVKDDSWKKL 213
Query: 158 -MLQYMSRIVERYTNSPYV--KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
+ + + +E + + K ++ + A +G K+ +Y A+ ++
Sbjct: 214 QSSEILKKAIEETNKNQFEVAKEKFEHLISIHYKPARSTFWLGEIRYKQQDYAGALGFYK 273
Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
A + ++ + + + + A + ++ YP A+
Sbjct: 274 KSSAISTKGDYVPKLLYHTAISLDKVGDPKSANKFYKALKTAYPDSPEAKAS 325
>gi|309791088|ref|ZP_07685623.1| serine/threonine protein kinase with TPR repeats [Oscillochloris
trichoides DG6]
gi|308226872|gb|EFO80565.1| serine/threonine protein kinase with TPR repeats [Oscillochloris
trichoides DG6]
Length = 858
Score = 39.0 bits (88), Expect = 0.68, Method: Composition-based stats.
Identities = 26/232 (11%), Positives = 52/232 (22%), Gaps = 23/232 (9%)
Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
++ + Y K + + A YF + ++ P + +L
Sbjct: 648 GTKADEAFDTALSMNPNNPNTHYAKGRIAFDNDEYRNAINYFERANQLNPRS---TYTLA 704
Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
A G + + ++ + + V Q +
Sbjct: 705 WLARAYQFEGFFADNDATRKDLYAKAESIYRQALDIRPNFAFATSGLGWVLQYQEKYEES 764
Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
+ R +E N + ++L E + Y +
Sbjct: 765 ISIFERAIELNPNDDEAYNGLGWSLFNLDRLGDAETAFRQSTQLAPNYASPQ-------- 816
Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
L L +DEAR E P A +
Sbjct: 817 ------------YGLGRTLEELGRLDEARAAFKTTLEIDPTYTQAEEALKRL 856
>gi|302391517|ref|YP_003827337.1| hypothetical protein Acear_0732 [Acetohalobium arabaticum DSM 5501]
gi|302203594|gb|ADL12272.1| Tetratricopeptide TPR_2 repeat protein [Acetohalobium arabaticum
DSM 5501]
Length = 251
Score = 39.0 bits (88), Expect = 0.68, Method: Composition-based stats.
Identities = 22/237 (9%), Positives = 65/237 (27%), Gaps = 13/237 (5%)
Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
+ + + I S+ V L+ ++ V++ Y+ + + ++ A
Sbjct: 1 MINRRSKFIIISLIVINLLCTGFVATASSSNKEVSN-------YKLGLKHFRAGDYQSAV 53
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV---DYVY 134
+ P L ++ + + E ++ Y+
Sbjct: 54 PKLAAAISENPDLMYPHYILGLTYYRLDKYKFAETQLKKAHEIKPEHYRVMVNLGRVYLK 113
Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
++ + + + R + + ++
Sbjct: 114 QDKIDQAIEITKQAIETNQKIDDAYNVLGRAYRKAEKIKEAIDSFKKAVELNDENYYVLN 173
Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
+G Y++ +Y AI + +A + L AY + + +A++
Sbjct: 174 NLGYTYIQTNQYKEAISVLKQAVALNPGIPYLYN---NLGFAYENVDELKKAKKAYE 227
>gi|241998476|ref|XP_002433881.1| O-linked N-acetylglucosamine transferase, OGT, putative [Ixodes
scapularis]
gi|215495640|gb|EEC05281.1| O-linked N-acetylglucosamine transferase, OGT, putative [Ixodes
scapularis]
Length = 832
Score = 39.0 bits (88), Expect = 0.68, Method: Composition-based stats.
Identities = 17/191 (8%), Positives = 44/191 (23%), Gaps = 6/191 (3%)
Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
+ S + + ++ L+ E + +A + + P +
Sbjct: 579 CAQLDSAGLKDPKTHESTKISALFNLGRLYADEGKYKEAIRVYQEAVAKMPDHYQPQSLY 638
Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
M + G+Y +A +E + + Y + + + + RA L
Sbjct: 639 NMMGEAYFKLGEYTEAERWYKEALRAKNDHIPAHLTYAKLLSKWNRPSEAEQWFLRAKGL 698
Query: 158 M------LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
Q+ + + + G A
Sbjct: 699 APNDSSVYQHYGQFLSESDRHTEAAELYLRAAELAPDEYEIIFNAANTLRQAGRNAEAEA 758
Query: 212 RFQLVLANYSD 222
+ +
Sbjct: 759 FYYTAVKLRPR 769
>gi|186684525|ref|YP_001867721.1| hypothetical protein Npun_F4407 [Nostoc punctiforme PCC 73102]
gi|186466977|gb|ACC82778.1| TPR repeat-containing protein [Nostoc punctiforme PCC 73102]
Length = 267
Score = 39.0 bits (88), Expect = 0.68, Method: Composition-based stats.
Identities = 32/250 (12%), Positives = 56/250 (22%), Gaps = 4/250 (1%)
Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQ-REVYEKAVLFLKEQNFSKAYEYFN 81
I +++ + GW + Q E +A + +F+ A Y+
Sbjct: 2 IKLIGIFLSLLLVFGWATPVMAQSQPPITQEQLKQGDEWANQAFAATNQGDFATAETYWT 61
Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
+ FP A + S Q + + E + +
Sbjct: 62 KIIEQFPTNAGAWSNRGNSRVSQNKLQEAIADYNKAIELAPNVTDPYLNRGAALEGLGKW 121
Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
I D Y + T + A Y L
Sbjct: 122 DDAIADYNYVLELDPNDAMAYNNRGNAKTGLGKWEDAIADYKKSNEIAPNFAFARANYAL 181
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE---VVSLIQERYP 258
E + + + A L AY EA + RY
Sbjct: 182 ALYETGQKEQAIREMRNIARKYSKFADVRAALTAAYWVNGEQGEAESNWVAAYGLDSRYK 241
Query: 259 QGYWARYVET 268
W + +
Sbjct: 242 DIDWVKNIRR 251
>gi|329770197|ref|ZP_08261587.1| hypothetical protein HMPREF0433_01351 [Gemella sanguinis M325]
gi|328837003|gb|EGF86647.1| hypothetical protein HMPREF0433_01351 [Gemella sanguinis M325]
Length = 107
Score = 39.0 bits (88), Expect = 0.68, Method: Composition-based stats.
Identities = 9/72 (12%), Positives = 21/72 (29%), Gaps = 7/72 (9%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDV-----RYQREVYEKAVLFLKEQN- 72
+ KF LT + L ++ + D + E ++A +
Sbjct: 1 MKKFLLTFIALLTTISLAACSSKTKEEKVTDDTNKQVEETKKQVDEASKQAKEATESGEK 60
Query: 73 -FSKAYEYFNQC 83
+A + +
Sbjct: 61 VVDEATKNVQKA 72
>gi|189219588|ref|YP_001940229.1| TPR repeats containing protein [Methylacidiphilum infernorum V4]
gi|189186446|gb|ACD83631.1| TPR repeats containing protein [Methylacidiphilum infernorum V4]
Length = 350
Score = 39.0 bits (88), Expect = 0.68, Method: Composition-based stats.
Identities = 10/67 (14%), Positives = 27/67 (40%)
Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
+ + +Y A+ +++++ + A A EA R+ + A + + ++YP
Sbjct: 60 FEEAKDYENALKAYRILIRKWPYAVFAPEAQFRIGQCLEKKGDFLGANKAYDRMIQKYPS 119
Query: 260 GYWARYV 266
+
Sbjct: 120 SSFFEQA 126
>gi|321252159|ref|XP_003192308.1| peroxisome targeting sequence binding protein [Cryptococcus gattii
WM276]
gi|317458776|gb|ADV20521.1| Peroxisome targeting sequence binding protein, putative
[Cryptococcus gattii WM276]
Length = 799
Score = 39.0 bits (88), Expect = 0.69, Method: Composition-based stats.
Identities = 22/229 (9%), Positives = 55/229 (24%), Gaps = 8/229 (3%)
Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
++ + D Y + + + +A ++ + P A +L +S +
Sbjct: 525 ELEAEVQKDPTSHEAWYALGLKQQENEREDQAILALSKVIQLDPQYRPAYLALAVSYTNE 584
Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
+I +Q
Sbjct: 585 GENEAACTMLENWIRMKDSKDAIGADGQKGRGRDKLIESLIEIARQTPHEIDADVQVALG 644
Query: 165 IVERY---TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
++ + + R + +G G AI + L +
Sbjct: 645 VLFNMSGGEDYSKAEDCFLAALAVRPEDWLLYNRLGATLANSGRSSEAIQYYHQALTLHP 704
Query: 222 DAEHAEEAMARLVEAYVALALMD-EAREVVSLIQERYPQ-GYWARYVET 268
A+ L AY+ L A+ ++ ++ ++ Y +
Sbjct: 705 SFV---RALFNLGIAYMNLGQYQAAAQSILDALRLQHSGASEAYAYGQN 750
>gi|229148579|ref|ZP_04276833.1| hypothetical protein bcere0011_1550 [Bacillus cereus m1550]
gi|228634837|gb|EEK91412.1| hypothetical protein bcere0011_1550 [Bacillus cereus m1550]
Length = 254
Score = 39.0 bits (88), Expect = 0.69, Method: Composition-based stats.
Identities = 12/59 (20%), Positives = 23/59 (38%), Gaps = 5/59 (8%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV-----YEKAVLFLKEQN 72
+ KF L +AV VG + ++ V+ ++E+ + KA K +
Sbjct: 1 MKKFILISSLVLAVGLGVGCSNEKTKKTDEPKKEAVQKEKELTAKDVFNKANEAFKNEE 59
>gi|333029885|ref|ZP_08457946.1| Tetratricopeptide TPR_1 repeat-containing protein [Bacteroides
coprosuis DSM 18011]
gi|332740482|gb|EGJ70964.1| Tetratricopeptide TPR_1 repeat-containing protein [Bacteroides
coprosuis DSM 18011]
Length = 666
Score = 39.0 bits (88), Expect = 0.69, Method: Composition-based stats.
Identities = 22/217 (10%), Positives = 53/217 (24%), Gaps = 7/217 (3%)
Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
+ + + + + + + Y +A+ + NFS +F +
Sbjct: 437 FAKNFNNEQAIQTALKEAQADDEYTQAIKDFDQGNFSSFLSHFFKAIHARYDIEKPLFQR 496
Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
+ + ++ L E Q + YY +G + +D
Sbjct: 497 FIRHKLGIITKLKEENKQLKETLSLQQKNLRKYAKEYYHMGNTCITDAKDSKAAIANYNK 556
Query: 158 MLQYMSRIVERYTNS----PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213
++ + +K + E Y + +A
Sbjct: 557 AIELYPEYTNAWVRKGVTLYNLKEYDEADICLNKAVQLNPYEFKTVYNRGKLRLAMHDDN 616
Query: 214 QLVLANYSDAEHAEE---AMARLVEAYVALALMDEAR 247
+ + E A +A + EA
Sbjct: 617 GALADLDKATTYKPEHAKAHELFGDALFRIGKESEAE 653
>gi|227823306|ref|YP_002827278.1| hypothetical protein contains tetratricopeptide-like helical domain
[Sinorhizobium fredii NGR234]
gi|227342307|gb|ACP26525.1| hypothetical protein contains tetratricopeptide-like helical domain
[Sinorhizobium fredii NGR234]
Length = 340
Score = 39.0 bits (88), Expect = 0.69, Method: Composition-based stats.
Identities = 17/81 (20%), Positives = 31/81 (38%)
Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
+ A +G +G+Y A F Y + A E + +L + AL + A
Sbjct: 250 EKAADASFWMGEAQYSQGKYSDAAKTFLNAHQAYGKSPKAPEMLLKLGMSLGALDNKETA 309
Query: 247 REVVSLIQERYPQGYWARYVE 267
+ + +RYP+ A +
Sbjct: 310 CATLREVDKRYPKASAAVRAK 330
>gi|209886400|ref|YP_002290257.1| TPR repeat protein [Oligotropha carboxidovorans OM5]
gi|209874596|gb|ACI94392.1| TPR repeat protein [Oligotropha carboxidovorans OM5]
Length = 339
Score = 39.0 bits (88), Expect = 0.69, Method: Composition-based stats.
Identities = 18/66 (27%), Positives = 29/66 (43%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ +G +R +Y A F V + Y + A +A+ RL E+ AL D A
Sbjct: 255 QYWLGESLYQRKQYREAAEAFLAVTSKYDKSAKAPDALLRLGESLAALKEKDAACAAFGE 314
Query: 253 IQERYP 258
+ +YP
Sbjct: 315 VARKYP 320
>gi|115378507|ref|ZP_01465664.1| tetratricopeptide repeat family [Stigmatella aurantiaca DW4/3-1]
gi|310819976|ref|YP_003952334.1| tetratricopeptide repeat-containing protein [Stigmatella aurantiaca
DW4/3-1]
gi|115364476|gb|EAU63554.1| tetratricopeptide repeat family [Stigmatella aurantiaca DW4/3-1]
gi|309393048|gb|ADO70507.1| tetratricopeptide repeat protein [Stigmatella aurantiaca DW4/3-1]
Length = 1369
Score = 39.0 bits (88), Expect = 0.69, Method: Composition-based stats.
Identities = 31/231 (13%), Positives = 64/231 (27%), Gaps = 8/231 (3%)
Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
+ +++ L + +Y A++ K ++ A +
Sbjct: 1137 AEKNLMLALNREPSNHEALYYVAMVKAKRAEYTGAIDQMKSAVEKA---PHRADYHYALG 1193
Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
+ A + +A + +E I + P + Y + + +
Sbjct: 1194 VIYRDAERLPEAIAEWKETIKRDPNHADT-YEQLGKAYLETNKMDEAIPAFESALAADPK 1252
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
R++ + + +G + + E+ Y K G + + + Y
Sbjct: 1253 RKRVLGAIGDVFFSEGRWDEAIRRYEKALKEAPELTYIYYKIGRAWSEREQPGRAIDWYK 1312
Query: 222 DAEHAEE----AMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
A AE A L AY A EA P R +E
Sbjct: 1313 KAVTAEPNNAMAQYYLGFAYKAKGRRKEATAAFQQYLSLKPNAEDKRDIED 1363
>gi|147921707|ref|YP_684473.1| thioredoxin-like protein [uncultured methanogenic archaeon RC-I]
gi|110619869|emb|CAJ35147.1| thioredoxin-like protein [uncultured methanogenic archaeon RC-I]
Length = 195
Score = 39.0 bits (88), Expect = 0.69, Method: Composition-based stats.
Identities = 17/86 (19%), Positives = 32/86 (37%), Gaps = 1/86 (1%)
Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA-YVALAL 242
++ A + G+ ++ +Y AI F+ + Y + E A EA A Y
Sbjct: 106 PPKDFRAQLILGEGKVSMRNEDYDKAISCFETIDKKYPETEAAPEAAYYTGVAQYKKTND 165
Query: 243 MDEAREVVSLIQERYPQGYWARYVET 268
+ + +YP+ WA+
Sbjct: 166 AKMLKNAHIYLSRKYPESDWAKKAFA 191
>gi|15126637|gb|AAH12250.1| Intraflagellar transport 88 homolog (Chlamydomonas) [Mus musculus]
Length = 824
Score = 39.0 bits (88), Expect = 0.69, Method: Composition-based stats.
Identities = 18/214 (8%), Positives = 50/214 (23%), Gaps = 10/214 (4%)
Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
+D + K ++ KA E++ + R + + + +
Sbjct: 479 SDRYNPSALTNKGNTVFANGDYEKAAEFYKEALR--NDSSCTEALYNIGLTYKKLNRLDE 536
Query: 112 QAASLGEEYITQYPE-----SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
S + + Y + + + L + +
Sbjct: 537 ALDSFLKLHAILRNSAQVLCQIANIYELMEDPNQAIEWLMQLISVVPTDSQALSKLGELY 596
Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
+ + + +G YY+ AI F+
Sbjct: 597 DSEGDKSQAFQYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAIQYFERASLIQPTQVKW 656
Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
+ + + +A + I ++P+
Sbjct: 657 Q---LMVASCFRRSGNYQKALDTYKEIHRKFPEN 687
Score = 35.9 bits (80), Expect = 6.6, Method: Composition-based stats.
Identities = 21/203 (10%), Positives = 61/203 (30%), Gaps = 7/203 (3%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
KA+ +L++++F++A + + A + L + + + +
Sbjct: 420 NKAITYLRQKDFNQAVDTLKMFEKKDSRVKSAAATNLSFLYYLENEFAQASSYADLAVNS 479
Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVP----YDQRATKLMLQYMSRIVERYTNSPYVKG 177
+Y S + + + + + + L + ++
Sbjct: 480 DRYNPSALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYKKLNRLDEALD 539
Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
+ + A +I Y + AI +++ +A+++L E Y
Sbjct: 540 SFLKLHAILRNSAQVLCQIANIYELMEDPNQAIEWLMQLISVVPTDS---QALSKLGELY 596
Query: 238 VALALMDEAREVVSLIQERYPQG 260
+ +A + +P
Sbjct: 597 DSEGDKSQAFQYYYESYRYFPSN 619
>gi|163846558|ref|YP_001634602.1| lytic transglycosylase catalytic [Chloroflexus aurantiacus J-10-fl]
gi|222524349|ref|YP_002568820.1| Lytic transglycosylase catalytic [Chloroflexus sp. Y-400-fl]
gi|163667847|gb|ABY34213.1| Lytic transglycosylase catalytic [Chloroflexus aurantiacus J-10-fl]
gi|222448228|gb|ACM52494.1| Lytic transglycosylase catalytic [Chloroflexus sp. Y-400-fl]
Length = 778
Score = 39.0 bits (88), Expect = 0.70, Method: Composition-based stats.
Identities = 13/64 (20%), Positives = 23/64 (35%)
Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
+ + Y + G A ++ + D A A+ R + Y L A +
Sbjct: 360 DWIQTYGQSGATAEAAALYRQYADDQPDDPRAPIALDRAAQLYDRLGDSAAATATRLELG 419
Query: 255 ERYP 258
+RYP
Sbjct: 420 QRYP 423
>gi|228961231|ref|ZP_04122851.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
thuringiensis serovar pakistani str. T13001]
gi|228798437|gb|EEM45430.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
thuringiensis serovar pakistani str. T13001]
Length = 278
Score = 39.0 bits (88), Expect = 0.71, Method: Composition-based stats.
Identities = 12/73 (16%), Positives = 23/73 (31%)
Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
+Q+ K LT S ++ L + + L + EKA L+++
Sbjct: 6 MFQMKKLLLTALISTSIFGLAACGGKDKDEKKLVVGASNVPHAVILEKAKPLLEKKGIEL 65
Query: 76 AYEYFNQCSRDFP 88
+ F
Sbjct: 66 EIKKFQDYVLPNK 78
>gi|218782228|ref|YP_002433546.1| hypothetical protein Dalk_4399 [Desulfatibacillum alkenivorans
AK-01]
gi|218763612|gb|ACL06078.1| Tetratricopeptide TPR_2 repeat protein [Desulfatibacillum
alkenivorans AK-01]
Length = 268
Score = 39.0 bits (88), Expect = 0.71, Method: Composition-based stats.
Identities = 25/254 (9%), Positives = 63/254 (24%), Gaps = 17/254 (6%)
Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
L + + + + G +D + + + V+ + E A F +
Sbjct: 20 LAVLCILILVSVPGCG--PKKDPNVRKQVEATQE-----LGVVLMNENRARAALREFLKA 72
Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI------TQYPESKNVDYVYYLV 137
P + L + + + + ++ +
Sbjct: 73 EALDPQDVEVQDYLGLVLLTLGRPQEAVEHFQRAVDLNPGYLNAQNNLGCAYLELAEWDK 132
Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
+ + + K + A +G
Sbjct: 133 AIEVFKDLLANLTYPTPWKPAANLGWA-YFNKGDMDAALEYYLMSVDQSPNYAIGWRGLG 191
Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
+ Y++ G A+ + L EA L EAY+ L +A+ + +
Sbjct: 192 QVYMETGNPQKAVISLEKALVAAPQF---AEAYYDLGEAYLRTGLRTKAKGAWEKVCDLA 248
Query: 258 PQGYWARYVETLVK 271
P+ + ++
Sbjct: 249 PETNVCARAASKIR 262
>gi|118082459|ref|XP_416123.2| PREDICTED: hypothetical protein [Gallus gallus]
Length = 896
Score = 39.0 bits (88), Expect = 0.71, Method: Composition-based stats.
Identities = 16/219 (7%), Positives = 43/219 (19%), Gaps = 9/219 (4%)
Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
++ +Y LF ++ ++ A + + + P +
Sbjct: 647 CSEIPDENLKDPHAHKSSVTSCLYNLGKLFHEQGHYEDALTVYKEAIQKMPRQFAPQSLY 706
Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL------VGMSYAQMIRDVPYD 151
M + +A E + + Y +
Sbjct: 707 NMMGEAYMRMSRLPEAERWYVESLRSKSDHIPAHLTYGKLLALTGRKSEAEKYFVKAIQL 766
Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
+ + + + N + A
Sbjct: 767 DPTKGNCYMHYGQFLLEESRLIEAAEMAKKAAELDNTEFDVVFNAAHMLRQASLNEEAEK 826
Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
+++ + A+ L + EA E
Sbjct: 827 YYEMAAGLRPNYPA---ALMNLGAILHLNGKLKEAEENY 862
>gi|255037553|ref|YP_003088174.1| hypothetical protein Dfer_3805 [Dyadobacter fermentans DSM 18053]
gi|254950309|gb|ACT95009.1| Tetratricopeptide domain protein [Dyadobacter fermentans DSM 18053]
Length = 595
Score = 39.0 bits (88), Expect = 0.71, Method: Composition-based stats.
Identities = 22/211 (10%), Positives = 70/211 (33%), Gaps = 3/211 (1%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
+ ++L + +A ++Q + + ++ L +A + Y G+++ A ++ +
Sbjct: 379 DLGDIYLLQGEPWEATLVYSQVEKSQKDDVLGYEAKLRNAKLHYFKGEFELAKAVLDILK 438
Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
D + + + +A + + + +
Sbjct: 439 KATTREIANDANELSLLIMDNTGLDSNETAMKAY--SSVELQLFQNKKFEAIDTLKQLYK 496
Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY-VAL 240
+ + Y+K A+ +L+ + + + ++A+ + + Y L
Sbjct: 497 RYESHSLADEILWLTAKTYIKLDSNQQAMTDLKLLYSKFGHDLYGDDALFAMAKLYQEKL 556
Query: 241 ALMDEAREVVSLIQERYPQGYWARYVETLVK 271
D+A ++ + E+YP + +
Sbjct: 557 NDKDQAMKMYQELMEKYPGSIFVAESRKRFR 587
>gi|226953080|ref|ZP_03823544.1| tol-pal system protein YbgF [Acinetobacter sp. ATCC 27244]
gi|294650669|ref|ZP_06728023.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
19194]
gi|226836172|gb|EEH68555.1| tol-pal system protein YbgF [Acinetobacter sp. ATCC 27244]
gi|292823460|gb|EFF82309.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
19194]
Length = 269
Score = 39.0 bits (88), Expect = 0.71, Method: Composition-based stats.
Identities = 20/114 (17%), Positives = 45/114 (39%), Gaps = 13/114 (11%)
Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
K +Q M ++ + N Y+ A F++ ++ Y AA +
Sbjct: 167 KQAIQPMQNFIKNHPNGIYIGNAYFWLAEFYL------------AVEPVNYTAAKQNYTT 214
Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMD-EAREVVSLIQERYPQGYWARYVET 268
V+ Y ++ A A+ +L + +A + + + +YPQ A++++
Sbjct: 215 VVNQYPNSARASRALYQLYSIAKEVDKNTAQANQYRTKLLAQYPQSEEAKFIQK 268
>gi|158520052|ref|YP_001527922.1| SpoIID/LytB domain-containing protein [Desulfococcus oleovorans
Hxd3]
gi|158508878|gb|ABW65845.1| SpoIID/LytB domain [Desulfococcus oleovorans Hxd3]
Length = 508
Score = 39.0 bits (88), Expect = 0.71, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 29/78 (37%), Gaps = 7/78 (8%)
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
+ ++ A+ F +L N+ + AEEA+ R +A + + QERYP
Sbjct: 64 HAQYLDQHDKALLYFDYILTNWPGSAAAEEALYRKGMVLYETERYAKAYQAFTAYQERYP 123
Query: 259 QG-------YWARYVETL 269
WA L
Sbjct: 124 HTGRRYTAGVWAESAANL 141
>gi|85859052|ref|YP_461254.1| TPR repeat-containing protein [Syntrophus aciditrophicus SB]
gi|85722143|gb|ABC77086.1| tetratricopeptide repeat family protein [Syntrophus aciditrophicus
SB]
Length = 569
Score = 39.0 bits (88), Expect = 0.71, Method: Composition-based stats.
Identities = 25/184 (13%), Positives = 43/184 (23%), Gaps = 1/184 (0%)
Query: 68 LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127
KE+ + A + + Q +R P +L A+ +
Sbjct: 356 FKERRYGAAVKKYEQLARSSPPRPSIYANLG-YAYTELKNYAESAKNYEKALKAGAKDPQ 414
Query: 128 KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
+ + + + K LQ + E Y + A
Sbjct: 415 IYYNLGFAYEKLGREKDAIGAYEKYEKDKPSLQVTQTLAELYLSEKRYDQAIQAYRKLIR 474
Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
K G + +E RL EAY + +EA
Sbjct: 475 NNPKKAAWYASLGYVYGRKNDINNEIENYRTALRYDPEDDETCYRLAEAYERKGMYEEAI 534
Query: 248 EVVS 251
S
Sbjct: 535 SAYS 538
>gi|29839839|ref|NP_828945.1| TPR domain-containing protein [Chlamydophila caviae GPIC]
gi|29834186|gb|AAP04823.1| TPR domain protein [Chlamydophila caviae GPIC]
Length = 318
Score = 39.0 bits (88), Expect = 0.72, Method: Composition-based stats.
Identities = 27/228 (11%), Positives = 73/228 (32%), Gaps = 13/228 (5%)
Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
+ + + +L++Q++ KA F + FP + +++ ++
Sbjct: 31 KLSPQKFVPKYSPEQYLSEGKNYLEQQSYRKALLCFGMITHHFPKDPLYTEAVYLTGVCY 90
Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
+ G+ A Y+ + + ++ + L+ +
Sbjct: 91 FKNGQPDLAEKAFAAYMQLPDADYSEELFLMKYSIAQSFAQGKRKRLFL-----LEGFPK 145
Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
+V ++ + ++ A G + ++ AI F+ + +S
Sbjct: 146 LVNADADALRIYDEILTAFPDKDLGAQALYLKGDLLVITKDFSEAIKIFKKLTLQFSAHA 205
Query: 225 HAEEAMARLVEAYVALALMD--------EAREVVSLIQERYPQGYWAR 264
+ +A RL E Y+ A + A+ I++++P
Sbjct: 206 LSPKAFVRLSEIYLMQAQKEPHNVQYLNLAKINEEAIKKQHPNHPLTE 253
>gi|228956613|ref|ZP_04118406.1| hypothetical protein bthur0005_1570 [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|228803039|gb|EEM49864.1| hypothetical protein bthur0005_1570 [Bacillus thuringiensis
serovar pakistani str. T13001]
Length = 254
Score = 39.0 bits (88), Expect = 0.72, Method: Composition-based stats.
Identities = 12/59 (20%), Positives = 23/59 (38%), Gaps = 5/59 (8%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV-----YEKAVLFLKEQN 72
+ KF L +AV VG + ++ V+ ++E+ + KA K +
Sbjct: 1 MKKFILISSLVLAVGLGVGCSNEKTKKTDEPKKEAVQKEKELTAKDVFNKANEAFKNEE 59
>gi|296127341|ref|YP_003634593.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563]
gi|296019157|gb|ADG72394.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563]
Length = 750
Score = 39.0 bits (88), Expect = 0.72, Method: Composition-based stats.
Identities = 25/211 (11%), Positives = 53/211 (25%)
Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
E+ KA + +++ KA EY ++ + + ++
Sbjct: 3 NSNNSIEELLNKAKESFENKDYEKAIEYIDKVIFYNGDSYDLYHNRGLAKLNLRLYEGAI 62
Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
+ E + +Y+ A + + + + I N
Sbjct: 63 KDFDRAIELGDYNSYYERGLAKFYMAFYKEAIEDFNKVVELDKSSAASFAYNTIGLCKYN 122
Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231
A Y + L + + + E
Sbjct: 123 LNEFDEALKYYNKAIETNPNLIIAYHNIALLKHSMGLDDEALSYLNKALEIDTNNIETYL 182
Query: 232 RLVEAYVALALMDEAREVVSLIQERYPQGYW 262
++ + L L EA E + I E YP +
Sbjct: 183 KIYSIKLGLGLEREANEYLDKIMEMYPDDLY 213
>gi|254411497|ref|ZP_05025274.1| Tetratricopeptide repeat family [Microcoleus chthonoplastes PCC
7420]
gi|196181998|gb|EDX76985.1| Tetratricopeptide repeat family [Microcoleus chthonoplastes PCC
7420]
Length = 703
Score = 39.0 bits (88), Expect = 0.72, Method: Composition-based stats.
Identities = 32/248 (12%), Positives = 65/248 (26%), Gaps = 39/248 (15%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
+ L + IA+ + G + V + + + + Y + L+ + + A
Sbjct: 298 KRKKLIVVLLIAMAVIAGGGGAT---VAIINWINSTNATQSYNRGETLLELRRYEDALSA 354
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
+N+ P A + + A + +YPE+
Sbjct: 355 YNRAVELQPDYAEAWLGQGDALLALGQSEAALDAYDQAIQIQREYPEAWKG--------- 405
Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
+ + + + ++ + G
Sbjct: 406 -----RGEALAALQRYEAAISAFDQVTKLQPEDVETWER-----------------RGMV 443
Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
+K Y AAI + L + A R A L +EA + E P
Sbjct: 444 QMKLQRYSAAIASYDKALEIQPNYSS---AWYRRGWALHNLQQYEEAIKSYDKAVEHKPD 500
Query: 260 G--YWARY 265
YW +
Sbjct: 501 SAEYWYQR 508
Score = 36.7 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 23/218 (10%), Positives = 48/218 (22%), Gaps = 8/218 (3%)
Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
Y + Q + A F+Q ++ P + M
Sbjct: 396 QREYPEAWKGRGEALAALQRYEAAISAFDQVTKLQPEDVETWERRGMVQMKLQRYSAAIA 455
Query: 113 AASLGEEYITQYPESKN-VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
+ E Y + + + + + + + R
Sbjct: 456 SYDKALEIQPNYSSAWYRRGWALHNLQQYEEAIKSYDKAVEHKPDSAEYWYQRGNAFVNL 515
Query: 172 SPYVK--GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
+ + + + G +Y A+ F+ + ++ EA
Sbjct: 516 NKHRDAVDSYQKAVQFQPDFYRAWYSQGSILNNLNQYQEALAAFEQAVKLQPNS---YEA 572
Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGY--WARY 265
A L DEA + P W
Sbjct: 573 WYGRAWALHQLQRYDEALMAYEKAVKLRPNSEQAWYNR 610
Score = 35.5 bits (79), Expect = 7.5, Method: Composition-based stats.
Identities = 20/221 (9%), Positives = 54/221 (24%), Gaps = 13/221 (5%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
Y Y + Q + +A + +++ P + +
Sbjct: 462 EIQPNYSSAWYRRGWALHNLQQYEEAIKSYDKAVEHKPDSAEYWYQRGNAFVNLNKHRDA 521
Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ-YMSRIVERY 169
+ ++ + + Y + + + + + R +
Sbjct: 522 VDSYQKAVQFQPDFYRAWYSQGSILNNLNQYQEALAAFEQAVKLQPNSYEAWYGRAWALH 581
Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
Y + Y + + + + RG + ++Q +A Y A + +
Sbjct: 582 QLQRYDEALMAYEKAVKLRP-----NSEQAWYNRGNVFYTLEQYQDAIAAYDQAVAHKRS 636
Query: 230 MARL----VEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
+ A L +EA P +
Sbjct: 637 HYQAWNSRANALFNLKRYNEALTSYENALTYQPN---YKEA 674
>gi|118588323|ref|ZP_01545732.1| hypothetical protein SIAM614_23617 [Stappia aggregata IAM 12614]
gi|118439029|gb|EAV45661.1| hypothetical protein SIAM614_23617 [Stappia aggregata IAM 12614]
Length = 315
Score = 39.0 bits (88), Expect = 0.72, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 34/95 (35%), Gaps = 2/95 (2%)
Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
V + + + + G+Y AA F+ L Y D A A L E+
Sbjct: 177 DDDQIANVIGSGDPSSDYNQAYSFAVNGDYAAAERGFRNFLETYPDDAQAANAQYWLGES 236
Query: 237 YVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+A EA + +P A+ ++L+K
Sbjct: 237 LLAQQNYREAADAFLKTYTDHPGN--AKSPDSLLK 269
Score = 37.5 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 14/82 (17%), Positives = 27/82 (32%)
Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
Q A + +G L + Y A F ++ + +++ +L +
Sbjct: 215 NFLETYPDDAQAANAQYWLGESLLAQQNYREAADAFLKTYTDHPGNAKSPDSLLKLGVSL 274
Query: 238 VALALMDEAREVVSLIQERYPQ 259
L D A S + +YP
Sbjct: 275 RGLGEADAACATFSELLSKYPN 296
>gi|313243715|emb|CBY42350.1| unnamed protein product [Oikopleura dioica]
Length = 747
Score = 39.0 bits (88), Expect = 0.73, Method: Composition-based stats.
Identities = 19/200 (9%), Positives = 50/200 (25%), Gaps = 6/200 (3%)
Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL--LMSAFVQYSAGKYQQAAS 115
+Y + + A E F + + + + SA +
Sbjct: 427 EALYNLGIACKRVDRKEDALESFIKLHQIQRTNPQVMFMIADVYRLMGDNSAAVEWLQQA 486
Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK-LMLQYMSRIVERYTNSPY 174
L + + S A Y +++++
Sbjct: 487 LSVSHNDPKLLQELGAIFDNEGDKSSAFQHNYDSYKLYPGDIRTIEWLASYYIESQFPEK 546
Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234
+V + K G A+ +++ + ++ E + LV
Sbjct: 547 AANYFARASVIDPHEVKWHLMNAACLRKVGNVHQALEKYRETHKKFPESR---EVLEYLV 603
Query: 235 EAYVALALMDEAREVVSLIQ 254
+ + EA++ ++
Sbjct: 604 RLCTDMKMDKEAKDFAHKLK 623
>gi|218439885|ref|YP_002378214.1| hypothetical protein PCC7424_2942 [Cyanothece sp. PCC 7424]
gi|218172613|gb|ACK71346.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7424]
Length = 632
Score = 39.0 bits (88), Expect = 0.73, Method: Composition-based stats.
Identities = 29/218 (13%), Positives = 56/218 (25%)
Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
+ + +++E+ E NF++A F Q + P A + L ++ Q
Sbjct: 15 NVPPNPILAQNIDQLFEQGNAAQNEGNFTEAERIFRQVIKINPNNADAYRYLGIALRNQG 74
Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
+ A + E Y E N V + I + S +
Sbjct: 75 KLEEAIAAYNTAIEINPNYAEVYNNLGVALYYQGKLEEAIAAYNTAIEINPNYAEVYSNL 134
Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
+N ++ A + +
Sbjct: 135 GFALSNQGKLEEAIAAYNKAIEINPNYAFAYIGLGIALYNQGKLEEAIAAYNKAIEINPN 194
Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
E + L A ++EA + E P +A
Sbjct: 195 YAEVYSNLGFALYNQGKLEEAIAAYNTAIEINPNDAFA 232
>gi|197118979|ref|YP_002139406.1| lytic transglycosylase domain-containing protein [Geobacter
bemidjiensis Bem]
gi|197088339|gb|ACH39610.1| lytic transglycosylase domain protein [Geobacter bemidjiensis Bem]
Length = 709
Score = 39.0 bits (88), Expect = 0.73, Method: Composition-based stats.
Identities = 26/212 (12%), Positives = 59/212 (27%), Gaps = 4/212 (1%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
D E++++ + +A E + + A K L Y A Y
Sbjct: 219 KVDPYTSAELFKRCGTLYGLGRYLQAAEAYAEIPLSGESADFVAKLKLKKGQALYKARHY 278
Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
QQA + ES Q + + ++E
Sbjct: 279 QQAQATFSNISGARHESDLWLARTLDKTGEQDQAFKLYMQLAQDRDSGNAGQEALLEAAY 338
Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE-- 228
+ + + + + L A + + + ++ A + E+
Sbjct: 339 LKRFQRKWSEALPLFKQYLTAVQQKPSNVLWESAWASYQSRNYEDAAAQFKKLTEREDLR 398
Query: 229 --AMARLVEAYVALALMDEAREVVSLIQERYP 258
++ L + A A++ +S + +P
Sbjct: 399 DKSLYWLGKTLAATGDAKGAQQALSTLAAEFP 430
Score = 37.1 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 26/253 (10%), Positives = 64/253 (25%), Gaps = 42/253 (16%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
++ ++ C + + + E A ++ +++ A E
Sbjct: 1 MFNRTAIAAAAVLFCTALPASALTFK-----------PADEALASAASRMQAKDYRTAKE 49
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
++ + + AA+ E++ + Y ++
Sbjct: 50 AASKVNDKGVRS-----------------FMVGMAAARLEQWEEAAAQLPAAAEGYPILA 92
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
L + R+++ Y S V+ A +
Sbjct: 93 DYALYYQGLSLAKLERHDQALTPLYRLLKHYPESRLVR--------------AALILYAD 138
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
G Y A + + Y + A+ L A +V+ I YP
Sbjct: 139 TLAAAGHYNEAQQSYATFVERYPSGSDSISALYGSALCKEKLGDPIAAAKVLRGIYLNYP 198
Query: 259 QGYWARYVETLVK 271
++ ++
Sbjct: 199 ASSFSDKSARDLQ 211
>gi|158521141|ref|YP_001529011.1| N-acetylmuramoyl-L-alanine amidase [Desulfococcus oleovorans Hxd3]
gi|158509967|gb|ABW66934.1| N-acetylmuramoyl-L-alanine amidase [Desulfococcus oleovorans Hxd3]
Length = 667
Score = 39.0 bits (88), Expect = 0.73, Method: Composition-based stats.
Identities = 13/83 (15%), Positives = 26/83 (31%), Gaps = 7/83 (8%)
Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL-------ALMDEAR 247
+ R + I F V A + R Y + A + EA
Sbjct: 46 QNPSRQQYRSYWQRCINAFLDVYEQDPAGPWAAAGLYRAGLLYTEMYKHSYRSADLQEAA 105
Query: 248 EVVSLIQERYPQGYWARYVETLV 270
++ + I R+P ++ + +
Sbjct: 106 DLFNRIVHRFPDSAYSARAKEQL 128
Score = 38.2 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 20/197 (10%), Positives = 55/197 (27%), Gaps = 15/197 (7%)
Query: 45 DVYLDSVTDVRYQREVYEKAVLF-------LKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
DVY +Y +L+ + + +A + FN+ FP + + ++
Sbjct: 66 DVYEQDPAGPWAAAGLYRAGLLYTEMYKHSYRSADLQEAADLFNRIVHRFPDSAYSARA- 124
Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
+ + + + Y S + +
Sbjct: 125 KEQLAGLSGKTTVVKTPATAPPSPSPSEDKIKARYFEAEGCYSDLANAPRRQKYRSYWQT 184
Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
+ + + P+ + + +L ++ + + Q V+
Sbjct: 185 CIDGFYDVYKSDPTGPWAAAGLYMAGKLQTELYKHSY-------RQADQDRGVELLQQVV 237
Query: 218 ANYSDAEHAEEAMARLV 234
+ + + E+A+A L
Sbjct: 238 REFPQSAYNEKAVAVLG 254
>gi|269838451|ref|YP_003320679.1| hypothetical protein Sthe_2442 [Sphaerobacter thermophilus DSM
20745]
gi|269787714|gb|ACZ39857.1| conserved hypothetical protein [Sphaerobacter thermophilus DSM
20745]
Length = 144
Score = 39.0 bits (88), Expect = 0.74, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 33/102 (32%), Gaps = 4/102 (3%)
Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
+R Y + L E + ++ + AI + D
Sbjct: 44 FADRRGTVHYRSLNFLPPDLFLTLLDLGEAWVDLHWSRTDH---AIELLRGAYERDPDGA 100
Query: 225 HAEEAMARLVEA-YVALALMDEAREVVSLIQERYPQGYWARY 265
A E + RL A Y+ E +V +++ R+P WA
Sbjct: 101 LAPEVLYRLGIAVYLKTRSDPEMYKVWDILRARFPDSIWAAR 142
>gi|312962751|ref|ZP_07777239.1| hypothetical protein PFWH6_4672 [Pseudomonas fluorescens WH6]
gi|311282968|gb|EFQ61561.1| hypothetical protein PFWH6_4672 [Pseudomonas fluorescens WH6]
Length = 68
Score = 39.0 bits (88), Expect = 0.74, Method: Composition-based stats.
Identities = 10/66 (15%), Positives = 25/66 (37%)
Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
A F V Y +++ +L + L D+ + ++ + +YP A+
Sbjct: 1 MQGAGQAFAKVSQLYPKHAKVPDSLYKLADVERRLGHTDKVKGILQQVVAQYPGTSAAQL 60
Query: 266 VETLVK 271
+ ++
Sbjct: 61 AQRDLQ 66
>gi|291392959|ref|XP_002712851.1| PREDICTED: intraflagellar transport 88 homolog [Oryctolagus
cuniculus]
Length = 831
Score = 39.0 bits (88), Expect = 0.74, Method: Composition-based stats.
Identities = 20/219 (9%), Positives = 49/219 (22%), Gaps = 6/219 (2%)
Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD---FPFAGVARKSLLMSAFVQYSAG 108
+D + K ++ KA E++ + R+ A A
Sbjct: 480 SDRYNPSALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLSYKKLNRLSEAL 539
Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
Q Y + + + L + + +
Sbjct: 540 DCFLKLHAILRNSAQVLYQIANVYELMEDPNQAIEWLMQLISVVPTDSRALSKLGELHDS 599
Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
+ + +G YY+ AI F+ +
Sbjct: 600 EGDKSQAFQYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAIQYFERASLIQPTQVKWQ- 658
Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
+ + +A + I +++P+ +
Sbjct: 659 --LMVASCFRRSGNYQKALDTYKDIHKKFPENVECKXYY 695
>gi|269119516|ref|YP_003307693.1| hypothetical protein Sterm_0892 [Sebaldella termitidis ATCC 33386]
gi|268613394|gb|ACZ07762.1| Tetratricopeptide TPR_2 repeat protein [Sebaldella termitidis ATCC
33386]
Length = 330
Score = 39.0 bits (88), Expect = 0.74, Method: Composition-based stats.
Identities = 24/245 (9%), Positives = 58/245 (23%), Gaps = 13/245 (5%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFL----KEQNFSKA 76
+ I + L + + ++ ++E YE A+ + ++ A
Sbjct: 1 MKKNLLVLFIIIISLFSCSKDTIKEKTNFKTAVEYEEKEDYENAIKYYKLAIEKDKNKDA 60
Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
++ + A G E+ + E
Sbjct: 61 MYNLALLYKEQKRFTDLISYYKVLADSGEVEGARLLGIMYYEQGDYKEAEKYYRIAADKG 120
Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196
S + ++ +Y V++ FY+ A K ++I
Sbjct: 121 ETDSMCNLGLLYDEEKNDIVKAEKYYKMSVDKGNVECTSYLGYFYLKNKNFNEAEKYLKI 180
Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR---------LVEAYVALALMDEAR 247
+ + ++ + A + L Y EA
Sbjct: 181 AADEGNENSIHNLAILYFQTGNSKDAIKYLKIAAEKHNSIIAIESLGNFYYEEKNYKEAE 240
Query: 248 EVVSL 252
+ +
Sbjct: 241 KYYKI 245
>gi|297380454|gb|ADI35341.1| paralysed flagella protein [Helicobacter pylori v225d]
Length = 789
Score = 39.0 bits (88), Expect = 0.75, Method: Composition-based stats.
Identities = 8/53 (15%), Positives = 15/53 (28%)
Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
NY E + + +A +A I Y +A + +
Sbjct: 248 KNYPTDPSIPEVLYYVAKALDENNNYKQAMRYYKRILLEYKNSRYAPLAQMRL 300
>gi|193214013|ref|YP_001995212.1| TPR repeat-containing protein [Chloroherpeton thalassium ATCC
35110]
gi|193087490|gb|ACF12765.1| TPR repeat-containing protein [Chloroherpeton thalassium ATCC
35110]
Length = 740
Score = 39.0 bits (88), Expect = 0.75, Method: Composition-based stats.
Identities = 14/115 (12%), Positives = 41/115 (35%), Gaps = 6/115 (5%)
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKE-----VEIGRYYLKRGEYVAAIPRFQLV 216
++ + S Y+ R + + + + L+ + ++ + +
Sbjct: 549 YKVLLADFPESAYINRVREHFNLPKLRRGENAPEQILYTNAIQTLENSQADTSLAMLKTL 608
Query: 217 LANYSDAEHAEEAMARLVEAYVA-LALMDEAREVVSLIQERYPQGYWARYVETLV 270
L+ Y ++ + + + Y L+ D A + YP+ A++V+ +
Sbjct: 609 LSRYPNSALIPKVLLGIGFIYENNLSEPDSAILAYQKLAADYPKSEEAKHVKNKL 663
Score = 39.0 bits (88), Expect = 0.76, Method: Composition-based stats.
Identities = 12/107 (11%), Positives = 25/107 (23%), Gaps = 1/107 (0%)
Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG-EYVAAIPRFQLVLAN 219
Y + A + I + +L +
Sbjct: 39 YFNAYYNASIEFEKGISAMREAQTFSASDNLHIFSKTENNTAGKANFEKVITKTSEILKS 98
Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
+ ++ A+ A+ + +AY + A I YP
Sbjct: 99 HPVSDLADNALLLMGKAYFYTNELQPAERKFKEILTNYPDSDIFDEA 145
>gi|253702185|ref|YP_003023374.1| hypothetical protein GM21_3595 [Geobacter sp. M21]
gi|251777035|gb|ACT19616.1| conserved hypothetical protein [Geobacter sp. M21]
Length = 186
Score = 39.0 bits (88), Expect = 0.75, Method: Composition-based stats.
Identities = 21/147 (14%), Positives = 44/147 (29%), Gaps = 1/147 (0%)
Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
Q E D + +R + T + +
Sbjct: 34 CKQMEEVTFADPAVINFVSDHVVPLRIPVTNAAHTSDYRVMWTPTIITMDYYGREHQRTV 93
Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
+ + + +G+ L G++ A+ +F +L D A EA+ A
Sbjct: 94 GYLPADEMVGSTLLGMGKVSLDYGQFSEAVIQFNTLLNGCPDCASAPEAVYLRGVARYKT 153
Query: 241 ALMDEA-REVVSLIQERYPQGYWARYV 266
+ A +E+ + +YP+ W +
Sbjct: 154 SHAPSALKEIYQQLLAQYPESEWTKRA 180
>gi|188528063|ref|YP_001910750.1| paralysed flagella protein [Helicobacter pylori Shi470]
gi|188144303|gb|ACD48720.1| paralysed flagella protein [Helicobacter pylori Shi470]
Length = 803
Score = 39.0 bits (88), Expect = 0.75, Method: Composition-based stats.
Identities = 8/53 (15%), Positives = 15/53 (28%)
Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
NY E + + +A +A I Y +A + +
Sbjct: 262 KNYPTDPSIPEVLYYVAKALDENNNYKQAMRYYKRILLEYKNSRYAPLAQMRL 314
>gi|296123749|ref|YP_003631527.1| hypothetical protein Plim_3515 [Planctomyces limnophilus DSM 3776]
gi|296016089|gb|ADG69328.1| Tetratricopeptide TPR_4 [Planctomyces limnophilus DSM 3776]
Length = 1009
Score = 39.0 bits (88), Expect = 0.75, Method: Composition-based stats.
Identities = 17/113 (15%), Positives = 39/113 (34%), Gaps = 5/113 (4%)
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
+ +V+ T+ LA ++G + AI + + Y
Sbjct: 880 LDNLVKLRDTLNKQANQTGLNTLHEAILANTAFDVGHQLFELRRDKDAIMAYNTAINRYR 939
Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVS----LIQERY-PQGYWARYVETL 269
+ A ++ EAY + EAR ++ +++++ P + +L
Sbjct: 940 NNPQVLSAFLQMAEAYRRMGKPAEARSMLEQGRVILRQKQIPDSAFDNLGSSL 992
>gi|261405204|ref|YP_003241445.1| TPR repeat-containing protein [Paenibacillus sp. Y412MC10]
gi|261281667|gb|ACX63638.1| TPR repeat-containing protein [Paenibacillus sp. Y412MC10]
Length = 656
Score = 39.0 bits (88), Expect = 0.75, Method: Composition-based stats.
Identities = 33/220 (15%), Positives = 62/220 (28%), Gaps = 7/220 (3%)
Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
+ D YE + + + +N ++A YF + S P + ++S +
Sbjct: 129 KESIKREDDSTVISTYYELGMAYYESRNPAEAARYF-RLSIQKPERAIPMYYYMLSVSLD 187
Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY--- 161
+ L E D Y L S QR + +
Sbjct: 188 LMDHVQEAVGVLQEGIQLADRYEAEADGGYALFAGSTNYSYGAFQTFQRQAREAYSFRKP 247
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
M+ + + + + ++ + G AA + +
Sbjct: 248 MADLYVQLGDLGQAEHYLSEAIERYPDSYELYLKRAEVLNRSGSKAAAKADLEWAIEAEP 307
Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
D A L Y A +EA E++S + R P
Sbjct: 308 DD---YRAYFDLARIYREDAREEEAFELISKLYARQPDSP 344
>gi|18202593|sp|Q61371|IFT88_MOUSE RecName: Full=Intraflagellar transport protein 88 homolog; AltName:
Full=Recessive polycystic kidney disease protein Tg737;
AltName: Full=Tetratricopeptide repeat protein 10;
Short=TPR repeat protein 10; AltName:
Full=TgN(Imorpk)737Rpw
gi|499647|gb|AAB59705.1| unknown [Mus musculus]
Length = 824
Score = 39.0 bits (88), Expect = 0.75, Method: Composition-based stats.
Identities = 18/214 (8%), Positives = 50/214 (23%), Gaps = 10/214 (4%)
Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
+D + K ++ KA E++ + R + + + +
Sbjct: 479 SDRYNPSALTNKGNTVFANGDYEKAAEFYKEALR--NDSSCTEALYNIGLTYKKLNRLDE 536
Query: 112 QAASLGEEYITQYPE-----SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
S + + Y + + + L + +
Sbjct: 537 ALDSFLKLHAILRNSAQVLCQIANIYELMEDPNQAIEWLMQLISVVPTDSQALSKLGELY 596
Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
+ + + +G YY+ AI F+
Sbjct: 597 DSEGDKSQAFQYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAIQYFERASLIQPTQVKW 656
Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
+ + + +A + I ++P+
Sbjct: 657 Q---LMVASCFRRSGNYQKALDTYKEIHRKFPEN 687
Score = 35.5 bits (79), Expect = 7.1, Method: Composition-based stats.
Identities = 21/203 (10%), Positives = 61/203 (30%), Gaps = 7/203 (3%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
KA+ +L++++F++A + + A + L + + + +
Sbjct: 420 NKAITYLRQKDFNQAVDTLKMFEKKDSRVKSAAATNLSFLYYLENEFAQASSYADLAVNS 479
Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVP----YDQRATKLMLQYMSRIVERYTNSPYVKG 177
+Y S + + + + + + L + ++
Sbjct: 480 DRYNPSALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYKKLNRLDEALD 539
Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
+ + A +I Y + AI +++ +A+++L E Y
Sbjct: 540 SFLKLHAILRNSAQVLCQIANIYELMEDPNQAIEWLMQLISVVPTDS---QALSKLGELY 596
Query: 238 VALALMDEAREVVSLIQERYPQG 260
+ +A + +P
Sbjct: 597 DSEGDKSQAFQYYYESYRYFPSN 619
>gi|326431903|gb|EGD77473.1| tetratricopeptide protein [Salpingoeca sp. ATCC 50818]
Length = 983
Score = 39.0 bits (88), Expect = 0.76, Method: Composition-based stats.
Identities = 17/221 (7%), Positives = 55/221 (24%), Gaps = 13/221 (5%)
Query: 50 SVTDVRYQREVYEK-AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
+ + +Y + + + + +A Y+ + F A + ++ A
Sbjct: 308 EGEEGKNVAVLYNNLGITYSGKGEYDRAIGYYEKAEEVFVEALGEKHPSTAQTYMGMGAT 367
Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
+ + + V+ + + + +
Sbjct: 368 YNSKGEYDKAIGYYEKAKEVFVEALGDKHTSTADSYNNLGNAYADKGDIDKAIHYYEKDL 427
Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP-RFQLVLANYSDAEHAE 227
+ + + L + G + + + R + + +
Sbjct: 428 AITAELLGDKHPSTATSYSNLGNAYADKGEHDKAIHYFERSCEIRVETLGEKHPST---A 484
Query: 228 EAMARLVEAYVALALMDEAREVV--------SLIQERYPQG 260
++ L AY D+A + + E++P
Sbjct: 485 DSYHNLGNAYADEGEHDKAIQYYEKSLDIKVETLGEKHPST 525
>gi|322392081|ref|ZP_08065543.1| tetratricopeptide (TPR) domain protein [Streptococcus peroris ATCC
700780]
gi|321144981|gb|EFX40380.1| tetratricopeptide (TPR) domain protein [Streptococcus peroris ATCC
700780]
Length = 410
Score = 39.0 bits (88), Expect = 0.76, Method: Composition-based stats.
Identities = 23/226 (10%), Positives = 69/226 (30%), Gaps = 4/226 (1%)
Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
+ S+ + +E A ++ ++++ KA YF Q + +
Sbjct: 188 EFLEKSLELEYDDQTAFELASIYFDQEDYQKATLYFKQLDTI---SPDFEGYEYGYSQAL 244
Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
+ + ++A + ++ +++ P + + + Q + Y +A +
Sbjct: 245 HKEHQTEEALKIAQQGLSKNPFETRLLLLASQLSYELHQPEQAEAYLLQAQENADDQ-EE 303
Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
I+ R + + + E + L + +
Sbjct: 304 ILLRLATIYQEQERYEDILALETYEPENLLTKWIIARSYQETEELDAAYDLYEKLVPELK 363
Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
E + + + L ++EA+E + + P + + +
Sbjct: 364 DNPEFLEQFIYLLRELGKLEEAKEYIQIYLHLVPDDMQMQELYDHL 409
>gi|308062558|gb|ADO04446.1| paralysed flagella protein [Helicobacter pylori Cuz20]
Length = 803
Score = 39.0 bits (88), Expect = 0.76, Method: Composition-based stats.
Identities = 8/53 (15%), Positives = 15/53 (28%)
Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
NY E + + +A +A I Y +A + +
Sbjct: 262 KNYPTDPSIPEVLYYVAKALDENNNYKQAMRYYKRILLEYKNSRYAPLAQMRL 314
>gi|300114393|ref|YP_003760968.1| PEP-CTERM system TPR-repeat lipoprotein [Nitrosococcus watsonii
C-113]
gi|299540330|gb|ADJ28647.1| PEP-CTERM system TPR-repeat lipoprotein [Nitrosococcus watsonii
C-113]
Length = 931
Score = 39.0 bits (88), Expect = 0.76, Method: Composition-based stats.
Identities = 23/201 (11%), Positives = 56/201 (27%)
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
Y + +L+ ++Q ++ A F + P A ++ + Q + ++ Y
Sbjct: 276 YAQGLLYFQQQQYADALTDFQKTLNQNPKYMPAVFYAGIAHYQQGQMEQAERLLQQFLAY 335
Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
Q + V V Y + ++ + + +
Sbjct: 336 FPQSEAAAKVLAVVRFHKGDYKGAESVLKPLLARYPNDTHILTLMGDIALRQGKAREGTG 395
Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
Y Q + L Q++ +A ++ +++
Sbjct: 396 YFQQVTIQEPESAAAYMKLGLGLEFSGEHQQGIQMLEKALKLEPQMPQADLLVILSHLQA 455
Query: 241 ALMDEAREVVSLIQERYPQGY 261
D+A E + +YP
Sbjct: 456 RNFDKAIEAAQQMHRKYPDSP 476
Score = 38.6 bits (87), Expect = 0.96, Method: Composition-based stats.
Identities = 28/227 (12%), Positives = 60/227 (26%), Gaps = 2/227 (0%)
Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA-FVQ 104
++ + + +L Q KA + + P A A
Sbjct: 125 TDYPTLPKEEQAELLALRGHAYLGLQELEKAEKSYESALSINPDTPEAGFGKARIAALQD 184
Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
+ Q + + + P + + G A ++R
Sbjct: 185 HLEETRQWLEKVLQTTPSFAPAWSLLGDLDRYQGNGEAAEQAYGKAIAHRFNNASDLLNR 244
Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
+ R Y A T+ + V + L + A + +
Sbjct: 245 ALVRIYLKDYEGAASDLETLSKRAPNHPGVTYAQGLLYFQQQQYADALTDFQKTLNQNPK 304
Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+ A+ A+ M++A ++ +PQ A V +V+
Sbjct: 305 YMP-AVFYAGIAHYQQGQMEQAERLLQQFLAYFPQSEAAAKVLAVVR 350
>gi|256113614|ref|ZP_05454434.1| Methyltransferase type 12 [Brucella melitensis bv. 3 str. Ether]
gi|265994981|ref|ZP_06107538.1| methyltransferase [Brucella melitensis bv. 3 str. Ether]
gi|262766094|gb|EEZ11883.1| methyltransferase [Brucella melitensis bv. 3 str. Ether]
Length = 276
Score = 39.0 bits (88), Expect = 0.76, Method: Composition-based stats.
Identities = 18/190 (9%), Positives = 46/190 (24%), Gaps = 3/190 (1%)
Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
D D E Y +A+ K +F A + + + + +
Sbjct: 3 QSDDKPLDQETLAEAYNRALALEKAGDFDAAAKAYEEVLQI---DPDDHGGAAVRLASMG 59
Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
+A + + +G +R++ + + +
Sbjct: 60 RGAVPLKAPEAYVATLFDQHAEMFDTILVDQLGYDVPLQLREMLLEMDDAFNAERMLDLG 119
Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
++ + + T EV + A+ + D
Sbjct: 120 CGTGLSADALDDMAAHKTGVDISENMIEVAYEKGDYDALFVGEAVRFLESTEEENWDLIV 179
Query: 226 AEEAMARLVE 235
A + + + E
Sbjct: 180 ATDVLPYMGE 189
>gi|217033595|ref|ZP_03439023.1| hypothetical protein HP9810_899g31 [Helicobacter pylori 98-10]
gi|216943941|gb|EEC23375.1| hypothetical protein HP9810_899g31 [Helicobacter pylori 98-10]
Length = 793
Score = 39.0 bits (88), Expect = 0.76, Method: Composition-based stats.
Identities = 8/53 (15%), Positives = 15/53 (28%)
Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
NY E + + +A +A I Y +A + +
Sbjct: 252 KNYPTDPSIPEVLYYVAKALDENNNYKQAMRYYKRILLEYKNSRYAPLAQMRL 304
>gi|239915965|ref|NP_033402.2| intraflagellar transport protein 88 homolog [Mus musculus]
gi|148704224|gb|EDL36171.1| intraflagellar transport 88 homolog (Chlamydomonas) [Mus musculus]
Length = 825
Score = 39.0 bits (88), Expect = 0.76, Method: Composition-based stats.
Identities = 18/214 (8%), Positives = 50/214 (23%), Gaps = 10/214 (4%)
Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
+D + K ++ KA E++ + R + + + +
Sbjct: 480 SDRYNPSALTNKGNTVFANGDYEKAAEFYKEALR--NDSSCTEALYNIGLTYKKLNRLDE 537
Query: 112 QAASLGEEYITQYPE-----SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
S + + Y + + + L + +
Sbjct: 538 ALDSFLKLHAILRNSAQVLCQIANIYELMEDPNQAIEWLMQLISVVPTDSQALSKLGELY 597
Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
+ + + +G YY+ AI F+
Sbjct: 598 DSEGDKSQAFQYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAIQYFERASLIQPTQVKW 657
Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
+ + + +A + I ++P+
Sbjct: 658 Q---LMVASCFRRSGNYQKALDTYKEIHRKFPEN 688
Score = 35.5 bits (79), Expect = 7.2, Method: Composition-based stats.
Identities = 21/203 (10%), Positives = 61/203 (30%), Gaps = 7/203 (3%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
KA+ +L++++F++A + + A + L + + + +
Sbjct: 421 NKAITYLRQKDFNQAVDTLKMFEKKDSRVKSAAATNLSFLYYLENEFAQASSYADLAVNS 480
Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVP----YDQRATKLMLQYMSRIVERYTNSPYVKG 177
+Y S + + + + + + L + ++
Sbjct: 481 DRYNPSALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYKKLNRLDEALD 540
Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
+ + A +I Y + AI +++ +A+++L E Y
Sbjct: 541 SFLKLHAILRNSAQVLCQIANIYELMEDPNQAIEWLMQLISVVPTDS---QALSKLGELY 597
Query: 238 VALALMDEAREVVSLIQERYPQG 260
+ +A + +P
Sbjct: 598 DSEGDKSQAFQYYYESYRYFPSN 620
>gi|56605882|ref|NP_001008437.1| dnaJ homolog subfamily C member 3 precursor [Gallus gallus]
gi|73620805|sp|Q5ZI13|DNJC3_CHICK RecName: Full=DnaJ homolog subfamily C member 3; Flags: Precursor
gi|53136602|emb|CAG32630.1| hypothetical protein RCJMB04_31h14 [Gallus gallus]
Length = 503
Score = 39.0 bits (88), Expect = 0.76, Method: Composition-based stats.
Identities = 23/258 (8%), Positives = 59/258 (22%), Gaps = 20/258 (7%)
Query: 34 FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93
L + +T + +Y +A+ +++++ A ++ +
Sbjct: 130 VLKSNPSNNEEKEAQTQLTKSDELQRLYSQALSAYRQEDYEAAIPLLDEILAVCVWDAEL 189
Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA---QMIRDVPY 150
R+ + K + + E+ Y + +R+
Sbjct: 190 RELRAECYIKEGEPSKAISDLKAAAKLKSDNTEAFYKISRIYYQLGDHELSLSEVRECLK 249
Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
+ K ++ + + V + A
Sbjct: 250 LDQDHKQCFSLYKQVKKLNKQIESAEEFIREGRYEDAISKYDSVMKTEPDVPVYATRAKE 309
Query: 211 PRFQLVLANYSDA-------------EHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
+ N A+ EAY+ L +EA + Q
Sbjct: 310 RICHCLSKNQQATEAITVCTQVLQLEPTNVNALKDRAEAYLLEDLYEEAIKDYETAQANS 369
Query: 258 PQGYW----ARYVETLVK 271
+ ++K
Sbjct: 370 ENDQQIREGLERAQRMLK 387
>gi|87310532|ref|ZP_01092661.1| hypothetical protein DSM3645_07695 [Blastopirellula marina DSM
3645]
gi|87286753|gb|EAQ78658.1| hypothetical protein DSM3645_07695 [Blastopirellula marina DSM
3645]
Length = 390
Score = 39.0 bits (88), Expect = 0.76, Method: Composition-based stats.
Identities = 30/167 (17%), Positives = 68/167 (40%), Gaps = 2/167 (1%)
Query: 72 NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
F A + ++ D P +A + L +A + GKY+ A + +P S++
Sbjct: 180 RFGNAIKLYDMIRLDDPTGKLADDATLAAANANFKRGKYEAADRFYTDLRQNFPSSEHQF 239
Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS--PYVKGARFYVTVGRNQL 189
+YL +M + YD ++ + + R+ ++ + + + R +
Sbjct: 240 IGHYLGMFCKLKMYQGPSYDGQSLEEAGKLAERMERQFPDRVVEHREAIDAAKKEVRAKQ 299
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
A + + ++ R +Y A + V+ + ++ A+ A R+VE
Sbjct: 300 AERLWHLATFFEGRQQYGGARFYYDQVIQEFPNSNMADAARQRMVEI 346
>gi|307354733|ref|YP_003895784.1| tetratricopeptide repeat-containing protein [Methanoplanus
petrolearius DSM 11571]
gi|307157966|gb|ADN37346.1| Tetratricopeptide TPR_2 repeat protein [Methanoplanus petrolearius
DSM 11571]
Length = 1070
Score = 39.0 bits (88), Expect = 0.77, Method: Composition-based stats.
Identities = 29/241 (12%), Positives = 68/241 (28%), Gaps = 16/241 (6%)
Query: 40 RQSSRDVYLDSVTDVRYQR---EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
++ + + +Y +A L K +S+A E F + + + P
Sbjct: 198 GKNEEALEIYETALKHDPSCIPALYNRAYLLEKVGRYSEAAEAFREINTNNPND------ 251
Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
L++AF + + + A I + D + + +++ +
Sbjct: 252 -LIAAFRRATDLFWTGAYGECAHTIEMILKKTPDDIKAWQMMGVALELLGEYERAVACYD 310
Query: 157 ---LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP-R 212
S G + + G ++ ++
Sbjct: 311 NVLKAAPAHSETWYHRGICLSGLGRYTEALNCYEHVTEQTGGTGVSWINNNVDLSLFDKD 370
Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY--WARYVETLV 270
+ + +AY+ L +A + S I E +P+ W E L+
Sbjct: 371 TAETQKGTKASIKKTNLLQMKGDAYMHLGRFHDAYDCYSKILETHPENIAVWRNISECLI 430
Query: 271 K 271
+
Sbjct: 431 R 431
>gi|296487046|gb|DAA29159.1| peptidyl-prolyl cis-trans isomerase FKBP4 [Bos taurus]
Length = 459
Score = 39.0 bits (88), Expect = 0.77, Method: Composition-based stats.
Identities = 28/191 (14%), Positives = 56/191 (29%), Gaps = 5/191 (2%)
Query: 74 SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
KA + + + + + + + ES +
Sbjct: 205 EKAIQRMEKGEHSIVYLKPRYAFGSAGKEKFQIPPNAELKYEIHLKSFEKAKESWEMSSE 264
Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
L + + V + + K + +IV + A
Sbjct: 265 EKLEQSTIVKERGTVYFKEGKYKQAVLQYKKIVSWLEYESSFSD--EDAEKAQALRLASH 322
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+ + +LK + AAI L S+ E+ + R EA++A+ D AR +
Sbjct: 323 LNLAMCHLKLQAFSAAIENCNKALELDSN---NEKGLFRRGEAHLAVNDFDLARADFQKV 379
Query: 254 QERYPQGYWAR 264
+ YP A+
Sbjct: 380 LQLYPSNKAAK 390
>gi|240281542|gb|EER45045.1| DnaJ domain-containing protein [Ajellomyces capsulatus H143]
Length = 730
Score = 39.0 bits (88), Expect = 0.77, Method: Composition-based stats.
Identities = 26/228 (11%), Positives = 59/228 (25%), Gaps = 19/228 (8%)
Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL---LMSAFVQYSAGKYQQAASLGEE 119
F K ++ KA + + + P + + +SA + + A + + A E
Sbjct: 250 AGNKFFKAGDYQKAIQEYTKAVEAQPSSSTYLSNRAAAYISAHLYHEALEDAKLADELEP 309
Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
+ Y + + A
Sbjct: 310 GNQKIMHRLARIYTSLGRPTEALSIYSQIQPPVTAKDKGPAETMLHHVTQAEGSLRDDRG 369
Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY------------SDAEHAE 227
+T+ A K + G ++ + ++ N D
Sbjct: 370 GSMTLYCLDQAVKGLGFGVTQPRKWRLMRVEAYLKMGNVNSLGDAQNIVMSMLRDNNQDP 429
Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQG----YWARYVETLVK 271
+A+ + A ++A + L P + R V+ L++
Sbjct: 430 DALLLRGRLFYAQGENEQAIKHFKLALSLDPDSAQAIRYLRMVQKLLR 477
>gi|239908044|ref|YP_002954785.1| hypothetical protein DMR_34080 [Desulfovibrio magneticus RS-1]
gi|239797910|dbj|BAH76899.1| hypothetical protein [Desulfovibrio magneticus RS-1]
Length = 435
Score = 39.0 bits (88), Expect = 0.77, Method: Composition-based stats.
Identities = 15/95 (15%), Positives = 29/95 (30%)
Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
+G +G+Y+ AI F V + A +++ ++ A
Sbjct: 337 DQFLANHPSSPLTPNALYWVGEGAFAQGDYMTAIADFDKVAKGWPGHHKAADSLYKMAMA 396
Query: 237 YVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
M AR + + YP A ++
Sbjct: 397 QEKAGNMAAARASLERYLKDYPNAELAAVARQKLQ 431
Score = 37.9 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 16/88 (18%), Positives = 31/88 (35%)
Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
+ + + + +Y + ++ A F++ ++ +P A SL
Sbjct: 332 AKTAFDQFLANHPSSPLTPNALYWVGEGAFAQGDYMTAIADFDKVAKGWPGHHKAADSLY 391
Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPE 126
A Q AG A + E Y+ YP
Sbjct: 392 KMAMAQEKAGNMAAARASLERYLKDYPN 419
>gi|302671508|ref|YP_003831468.1| TPR domain-containing protein [Butyrivibrio proteoclasticus B316]
gi|302395981|gb|ADL34886.1| TPR domain-containing protein [Butyrivibrio proteoclasticus B316]
Length = 472
Score = 39.0 bits (88), Expect = 0.78, Method: Composition-based stats.
Identities = 7/56 (12%), Positives = 15/56 (26%)
Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
Y + L +Y + A+ + +P A +T +
Sbjct: 409 NYSKAYQFDNTNVNTLYYLGNSYYESGDFENAKTTYDAVITNFPDTQSAAAAQTKL 464
>gi|282891689|ref|ZP_06300175.1| hypothetical protein pah_c189o010 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281498424|gb|EFB40757.1| hypothetical protein pah_c189o010 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 655
Score = 39.0 bits (88), Expect = 0.78, Method: Composition-based stats.
Identities = 19/248 (7%), Positives = 61/248 (24%), Gaps = 6/248 (2%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV-YEKAVLFLKEQNFSKAY 77
+ K+ ++I I + ++G +V + + + A F+++ F++A
Sbjct: 1 MRKWVVSILSLIGIAAVIGGSFYWLNQEETLAVPKTHMEEALEMQVATRFVEDGRFAEAL 60
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
Q + + K L Q + ++ +
Sbjct: 61 AIIRQYEPEMERYSASGKQWLRLMIDASEKQGNIQQLLILHRSFPDAFDANEKAALTIAD 120
Query: 138 GMSYAQMIRDVP-----YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
Q ++ ++ + + + ++
Sbjct: 121 KCVLDQKTKEYQCIRSLWEGQEGQKEKWLFLDVEMLARAGRLSDAITLLKFQPLGDQKSE 180
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ L + + + + + H E + + + A
Sbjct: 181 LKRLSHLALLHLKDQNPRMAWDYLNQAHKLSPHDPEIRSYRGKVLETIGKKQLAFSEYLA 240
Query: 253 IQERYPQG 260
+ +P
Sbjct: 241 ALQEHPDN 248
>gi|224538028|ref|ZP_03678567.1| hypothetical protein BACCELL_02917 [Bacteroides cellulosilyticus
DSM 14838]
gi|224520375|gb|EEF89480.1| hypothetical protein BACCELL_02917 [Bacteroides cellulosilyticus
DSM 14838]
Length = 991
Score = 39.0 bits (88), Expect = 0.78, Method: Composition-based stats.
Identities = 12/68 (17%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE----AREVVSLIQER 256
+ ++ A F+ ++ + D A+EA +L +A+ ++ A + + + R
Sbjct: 613 DRMHDFQRAEAMFERLIRQFPDFAQADEAYYQLFLTELAIEYYEKKGSSAEKYKAELIAR 672
Query: 257 YPQGYWAR 264
+P+ +A+
Sbjct: 673 FPESRYAK 680
>gi|126339121|ref|XP_001372916.1| PREDICTED: hypothetical protein [Monodelphis domestica]
Length = 1000
Score = 39.0 bits (88), Expect = 0.78, Method: Composition-based stats.
Identities = 26/244 (10%), Positives = 61/244 (25%), Gaps = 24/244 (9%)
Query: 36 VGWERQSSRDVYLDSVTDVRY--------QREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87
+ +++L + R + Y A + +A ++ + +
Sbjct: 568 FSCKTVKQNEIWLSRESLFRSGVETLPHNAKVHYNYANFLKDQGRNGEAIFHYKTALKLY 627
Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147
P A +L A +Y Q A + + +RD
Sbjct: 628 PHHASALNNLGTLTKDTTEAKEYYQRALQLNPQHNRALFNLGNLLKSQGKKEEAIIFLRD 687
Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
++ ++ + + G + + G
Sbjct: 688 SIKFGPEFADAYSSLASLLAEQELFEEAEEVYQSGIKNCPESPDLHNNYGVFLVDAGAPE 747
Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
+A+ +Q + + AM L Y +L EA + W +
Sbjct: 748 SAMYHYQQAIRL---SPSHHVAMVNLGRLYRSLGENKEAEK-------------WYKRAL 791
Query: 268 TLVK 271
+ +
Sbjct: 792 DITQ 795
>gi|222823961|ref|YP_002575535.1| conserved hypothetical lipoprotein [Campylobacter lari RM2100]
gi|222539183|gb|ACM64284.1| conserved hypothetical lipoprotein [Campylobacter lari RM2100]
Length = 218
Score = 39.0 bits (88), Expect = 0.79, Method: Composition-based stats.
Identities = 33/200 (16%), Positives = 72/200 (36%), Gaps = 7/200 (3%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
K IA FL + + D+Y E Y++ + L+E+N A ++
Sbjct: 1 MKKLFIFSLIIAGLFLGACSSKKAEDLY------NLSSMEWYQQIIKDLQEKNLEAADKH 54
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
+ + + + ++LL+ A S +Y+ A +EY+ ++ +S+NV Y+ YL
Sbjct: 55 YTSMAAEHIADPLLEQTLLILAQAHISEEEYEMANFYLDEYLNKFGDSQNVAYIRYLKIK 114
Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
+ +Q ++ + + Y N Y + N
Sbjct: 115 AKFDSFAVPNRNQALMLKTIEEIKEYNQSYPNVQY-NDLIDTMLTKFNLAVFYLDTSIAE 173
Query: 200 YLKRGEYVAAIPRFQLVLAN 219
++ + ++ + N
Sbjct: 174 LYQKKNREQSYEIYKQKIEN 193
>gi|332709548|ref|ZP_08429509.1| murein transglycosylase family protein [Lyngbya majuscula 3L]
gi|332351807|gb|EGJ31386.1| murein transglycosylase family protein [Lyngbya majuscula 3L]
Length = 731
Score = 39.0 bits (88), Expect = 0.79, Method: Composition-based stats.
Identities = 32/249 (12%), Positives = 74/249 (29%), Gaps = 2/249 (0%)
Query: 24 LTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
L + +A Q RD +D + + + + + KA + + Q
Sbjct: 201 LPLLLILAKHTPKALGMQEIRDRIVDKYPEQLTPEDWEMIGTGYWETWKYGKAGKAYAQA 260
Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
R A + L + Y+Q S + + +
Sbjct: 261 PRTPRNLYRAGRGLHLDTKASKGKIFYEQLISAYPNAKETGLALRRLASISKRTEALAYL 320
Query: 144 MIRDVPYDQRATKLMLQYMSRI--VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
Y A + +L + + ++ + + + A ++ +
Sbjct: 321 DQVIQNYPDEAPQALLDKAKILEKLNSKVSAGQARKSVLTQYGSSDAAANYRWQMAQKKA 380
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
+G+ A Q + D++ A +A + L ++A+ + RYP+ Y
Sbjct: 381 AKGKLQEAWQWAQPITTKNPDSDIAAQAGFWVGRWASQLGRPNDAKAAFEHVIARYPESY 440
Query: 262 WARYVETLV 270
+A +
Sbjct: 441 YAWRSANYL 449
>gi|296413480|ref|XP_002836440.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295630261|emb|CAZ80631.1| unnamed protein product [Tuber melanosporum]
Length = 763
Score = 39.0 bits (88), Expect = 0.79, Method: Composition-based stats.
Identities = 23/186 (12%), Positives = 54/186 (29%)
Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
+G+ ++ D + Q+ +Y A+ K+ ++ A + + FP A++
Sbjct: 259 LGYNEKALIDADKVLSYEPLNQKALYRSALACYKDGDYESAKSRLVKLLKKFPENKNAKE 318
Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
LL + + + ++ E + VG AT
Sbjct: 319 RLLRTFQRLREQRTGKYEFLKMRNQVKEWGEKRGKLDCAEYVGPVRVGKAGGKGRGLFAT 378
Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
+ + + + + + A + + N A K L + +
Sbjct: 379 RDVKFGELLLCSKAFKVCHKEAANARLEILFNLKARKGQAGTHSQLVQELIQELYHNPKK 438
Query: 216 VLANYS 221
Y
Sbjct: 439 AKRFYD 444
Score = 35.5 bits (79), Expect = 6.9, Method: Composition-based stats.
Identities = 8/48 (16%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Query: 224 EHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
++A+ R A + A+ + + +++P+ A+ E L++
Sbjct: 277 PLNQKALYRSALACYKDGDYESAKSRLVKLLKKFPENKNAK--ERLLR 322
>gi|229153177|ref|ZP_04281356.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
cereus m1550]
gi|228630276|gb|EEK86926.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
cereus m1550]
Length = 278
Score = 39.0 bits (88), Expect = 0.79, Method: Composition-based stats.
Identities = 12/73 (16%), Positives = 23/73 (31%)
Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
+Q+ K LT S ++ L + + L + EKA L+++
Sbjct: 6 MFQMKKLLLTALISTSIFGLAACGGKDKDEKKLVVGASNVPHAVILEKAKPLLEKKGIEL 65
Query: 76 AYEYFNQCSRDFP 88
+ F
Sbjct: 66 EIKKFQDYVLPNK 78
>gi|240146185|ref|ZP_04744786.1| putative tetratricopeptide repeat-containing domain protein
[Roseburia intestinalis L1-82]
gi|257201719|gb|EEV00004.1| putative tetratricopeptide repeat-containing domain protein
[Roseburia intestinalis L1-82]
Length = 454
Score = 39.0 bits (88), Expect = 0.79, Method: Composition-based stats.
Identities = 16/114 (14%), Positives = 34/114 (29%), Gaps = 4/114 (3%)
Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
L ++ + + V + + K E + ++ + +
Sbjct: 341 NALGNVNEEYLSDSAKSVYETINAQVNADYLESLYNQGYSDYNSQKFEESITSLQKVVDM 400
Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
Y D A+ L +AY ++ A+ I E YP A + +
Sbjct: 401 EETYKDG----YALYYLAQAYRKNNDLETAKTYYQKIVELYPGTERAANAQNYI 450
>gi|296481738|gb|DAA23853.1| intraflagellar transport 88 homolog [Bos taurus]
Length = 825
Score = 39.0 bits (88), Expect = 0.80, Method: Composition-based stats.
Identities = 20/212 (9%), Positives = 47/212 (22%), Gaps = 6/212 (2%)
Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD---FPFAGVARKSLLMSAFVQYSAG 108
+D + K ++ KA E++ + R+ A A
Sbjct: 480 SDRYNPSALTNKGNTVFANGDYEKAAEFYKEALRNDCSCTEALYNIGLTYKKLNRLDEAL 539
Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
Q Y + + + L + + +
Sbjct: 540 DCFLKLHAILRNSAQVLYQIANVYELMEDPSQAMEWLMQLISVVPTDSRALSKLGGLYDS 599
Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
+ + +G YY+ AI F+ +
Sbjct: 600 EGDKSQAFQYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAIQYFERASLIQPTQVKWQ- 658
Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQG 260
+ + +A + I ++P+
Sbjct: 659 --LMVASCFRRSGNYQKALDTYKDIHRKFPEN 688
>gi|118359319|ref|XP_001012899.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89294666|gb|EAR92654.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 1122
Score = 39.0 bits (88), Expect = 0.80, Method: Composition-based stats.
Identities = 27/220 (12%), Positives = 64/220 (29%)
Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99
++S + Y + + Q + +A + + + A +L +
Sbjct: 580 KESIEQYQIAIDVKPSSYDAYYNMGIAYHSLQQYDEAIQSYKNAIKIKANYNNAIYNLGV 639
Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
+ + + + S + + + + Y Y + + + L +
Sbjct: 640 TYYDLGQYEESLKYYSQAYDLNPDFVDICYSTGLSYEKLNKYPEALDWYKRAIKLDPLYM 699
Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219
R+++ Y + A ++T G EV+ + + + + Q
Sbjct: 700 DPFKRLIDIYVKEGRQEEAIEFLTKGIGLAEKNEVQYFYLGVIKFKELKLDEAMQFFKQA 759
Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
E+A L Y DEA + E P
Sbjct: 760 IEKNPSLEDAHFNLGLCYYKQKNYDEAIREYLIADELKPN 799
Score = 36.3 bits (81), Expect = 4.5, Method: Composition-based stats.
Identities = 24/209 (11%), Positives = 52/209 (24%), Gaps = 3/209 (1%)
Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
++ ++ ++ A YF Q + P+ A + Q
Sbjct: 427 ADSHFKIGYIYYEKGEDDIAINYFKQAIKINPYYEQAYNMIGNIYNYQQKQEDAIIWYDK 486
Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
+ + ++ N + Y + Q + +K ++ Y N
Sbjct: 487 AIQLNPNFGDNYNNLGLQYYNQKQFDQALWYFQKSAEKSKNLVNAYVNQGLCYQNLNQQD 546
Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
A L + + + +A + A
Sbjct: 547 EAIQQYQKAIEVDPNFSDAHYNLALIYYDKKLMKESIEQYQIAIDVKPSSYDAYYNMGIA 606
Query: 237 YVALALMDEAREVVS---LIQERYPQGYW 262
Y +L DEA + I+ Y +
Sbjct: 607 YHSLQQYDEAIQSYKNAIKIKANYNNAIY 635
>gi|15639360|ref|NP_218809.1| hypothetical protein TP0369 [Treponema pallidum subsp. pallidum
str. Nichols]
gi|189025602|ref|YP_001933374.1| hypothetical protein TPASS_0369 [Treponema pallidum subsp. pallidum
SS14]
gi|14285869|sp|O83384|Y369_TREPA RecName: Full=Uncharacterized protein TP_0369; Flags: Precursor
gi|3322653|gb|AAC65360.1| predicted coding region TP0369 [Treponema pallidum subsp. pallidum
str. Nichols]
gi|189018177|gb|ACD70795.1| hypothetical protein TPASS_0369 [Treponema pallidum subsp. pallidum
SS14]
Length = 516
Score = 39.0 bits (88), Expect = 0.80, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 28/89 (31%), Gaps = 3/89 (3%)
Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA-- 241
Q + R + +G A+ A + E +EA +AY
Sbjct: 416 HKEGQEKRDHLAEARQFCAQGNARDALASLGDFFAQFPSHERMDEAWFLRGQAYEINGAQ 475
Query: 242 -LMDEAREVVSLIQERYPQGYWARYVETL 269
+ A E I ER+P + + +
Sbjct: 476 RNVRLALEAYKTILERFPHSPYWKKADER 504
>gi|229130243|ref|ZP_04259202.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
cereus BDRD-Cer4]
gi|228653176|gb|EEL09055.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
cereus BDRD-Cer4]
Length = 278
Score = 39.0 bits (88), Expect = 0.81, Method: Composition-based stats.
Identities = 12/73 (16%), Positives = 23/73 (31%)
Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
+Q+ K LT S ++ L + + L + EKA L+++
Sbjct: 6 MFQMKKLLLTALISTSIFGLAACGGKDKDEKKLVVGASNVPHAVILEKAKPLLEKKGIEL 65
Query: 76 AYEYFNQCSRDFP 88
+ F
Sbjct: 66 EIKKFQDYVLPNK 78
>gi|254428182|ref|ZP_05041889.1| type IV pilus biogenesis/stability protein PilW [Alcanivorax sp.
DG881]
gi|196194351|gb|EDX89310.1| type IV pilus biogenesis/stability protein PilW [Alcanivorax sp.
DG881]
Length = 261
Score = 39.0 bits (88), Expect = 0.81, Method: Composition-based stats.
Identities = 24/255 (9%), Positives = 65/255 (25%), Gaps = 10/255 (3%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ +F IF FL + V + + +L++ + S+A
Sbjct: 1 MRRFFQVIFILSFAGFLAAGCVTVDDGPKVKVDDAVNSRVAA---GLQYLQQGSPSEARR 57
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYS-----AGKYQQAASLGEEYITQYPESKNVDYV 133
+F++ + VA ++ + + + + +
Sbjct: 58 HFSRALSLDDDSAVAHNAMALLYKYEQDPANEEYHYRKALDANRHYSPALNNYGTLLYGR 117
Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
+ M R ++ N + A +
Sbjct: 118 GEYKEALKHFKKAANDPSYEGRGSAWENMGRCYQKLGNDDDARNAYVKALRLNPRSVQPS 177
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+E+ + Y A +Q + + A+ ++ +L ++ +
Sbjct: 178 LELAQLYFDEDRSRLAWDYYQQYVQR--TGRQSARALWLGIQLSNSLGYRNQQSSYELAL 235
Query: 254 QERYPQGYWARYVET 268
Y + R +
Sbjct: 236 DNLYRRSGEYRQWQE 250
>gi|150003976|ref|YP_001298720.1| TPR domain-containing protein [Bacteroides vulgatus ATCC 8482]
gi|294778011|ref|ZP_06743445.1| tetratricopeptide repeat protein [Bacteroides vulgatus PC510]
gi|319639787|ref|ZP_07994517.1| TPR domain-containing protein [Bacteroides sp. 3_1_40A]
gi|149932400|gb|ABR39098.1| TPR domain protein [Bacteroides vulgatus ATCC 8482]
gi|294448069|gb|EFG16635.1| tetratricopeptide repeat protein [Bacteroides vulgatus PC510]
gi|317388604|gb|EFV69453.1| TPR domain-containing protein [Bacteroides sp. 3_1_40A]
Length = 602
Score = 39.0 bits (88), Expect = 0.81, Method: Composition-based stats.
Identities = 26/244 (10%), Positives = 67/244 (27%), Gaps = 11/244 (4%)
Query: 27 FFSIAVCFLVGW------ERQSSRDVYLDSVTDVRYQRE-----VYEKAVLFLKEQNFSK 75
+ LV S ++ + ++ + +A+ ++ +
Sbjct: 11 LCVCLIGMLVSCGTVKRASGLSGNKAVVEEKDPLTPEQRRKYDYFFLEALRMKEKGDLDA 70
Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
A+E ++ C +P + K ++A + + K YY
Sbjct: 71 AFEMYSHCLDIYPQGAATLFEISRFHMFLNQPEKGEEALKKAVDADPKSFWYKQTLAAYY 130
Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
+Y + I L+ + +++ YT + + + E
Sbjct: 131 QGKGNYPKAIYVYEDMASQFPSRLEPLMALIDLYTRTKDYQQVVNTLNRLEALDGKSEQI 190
Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
+ F + + + + L + Y+ +EA E + +
Sbjct: 191 SMEKFRMYLAMNNDQQAFTEIENLAKEYPYDMRYLTILGDVYLNNGKEEEAYETYQKVLK 250
Query: 256 RYPQ 259
P
Sbjct: 251 EEPG 254
>gi|197119891|ref|YP_002140318.1| hypothetical protein Gbem_3529 [Geobacter bemidjiensis Bem]
gi|197089251|gb|ACH40522.1| conserved hypothetical protein [Geobacter bemidjiensis Bem]
Length = 186
Score = 39.0 bits (88), Expect = 0.81, Method: Composition-based stats.
Identities = 15/102 (14%), Positives = 35/102 (34%), Gaps = 1/102 (0%)
Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
+ + + + +G+ L G++ A+ +F +L D
Sbjct: 79 IITMDYYGREHQRTVGFLTAEEMVGSALLGMGKVSLDYGQFSEAVIQFNTLLNGCPDCAS 138
Query: 226 AEEAMARLVEAYVALALMDEA-REVVSLIQERYPQGYWARYV 266
A EA+ A + A +++ + +YP+ W +
Sbjct: 139 APEAVYLRGVARYKTSHAPSALKDIYQQLLAQYPESEWTKRA 180
>gi|326912625|ref|XP_003202649.1| PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP4-like
[Meleagris gallopavo]
Length = 442
Score = 38.6 bits (87), Expect = 0.81, Method: Composition-based stats.
Identities = 21/191 (10%), Positives = 48/191 (25%), Gaps = 5/191 (2%)
Query: 74 SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
KA + + + + + + + ES ++
Sbjct: 198 EKAIQKMEKSEESIFYLKPNYGFGSTGKEKFQIPPDAELQYEVKLKGFEKAKESWEMNTE 257
Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
L + + + K +IV + + A
Sbjct: 258 EKLEQSCMVKERGTQYFKEGKYKRAALQYKKIVSWLEHESGLSNEEDTKARSLRLAAHLN 317
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+ + LK + E+ + R EA++A+ + AR +
Sbjct: 318 LAMCHLKLKEYS-----QALENCNKALELDSSNEKGLFRRGEAHLAVNDFELARGDFQKV 372
Query: 254 QERYPQGYWAR 264
+ YP A+
Sbjct: 373 IQLYPSNKAAK 383
>gi|330929325|ref|XP_003302599.1| hypothetical protein PTT_14477 [Pyrenophora teres f. teres 0-1]
gi|311321932|gb|EFQ89300.1| hypothetical protein PTT_14477 [Pyrenophora teres f. teres 0-1]
Length = 1055
Score = 38.6 bits (87), Expect = 0.81, Method: Composition-based stats.
Identities = 14/156 (8%), Positives = 38/156 (24%), Gaps = 13/156 (8%)
Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
+ + +++ D+++ ++ + + ++ M I + K
Sbjct: 283 HVMHRVLHTVTQDEDFIWDWFVQTFDDLNSLNLRTSACYEYAIKQMLEIPRYQQYTNKRK 342
Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN-------------YSDA 223
R + + ++ A Y
Sbjct: 343 IWHKLYRDYRQRYLDGMKHGSEQRPSENLVRNLVRQYTEHHATGNTEEFINDLRLFYPKR 402
Query: 224 EHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
+ RL+ Y + AR+ + YP
Sbjct: 403 PLRPGLLRRLIMYYARTGDAESARKYIKEFASTYPN 438
>gi|297694295|ref|XP_002824422.1| PREDICTED: dnaJ homolog subfamily C member 3-like [Pongo abelii]
Length = 496
Score = 38.6 bits (87), Expect = 0.81, Method: Composition-based stats.
Identities = 22/260 (8%), Positives = 66/260 (25%), Gaps = 20/260 (7%)
Query: 32 VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91
L ++ + + + +A+ +++ A + ++ +
Sbjct: 121 FTALKSNPSENEEKEAQSQLIKSDEMQRLRSQALNAFGSGDYTAAIAFLDKILEVCVWDA 180
Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151
R+ + K + E+ Y + + +V
Sbjct: 181 ELRELRAECFIKEGEPRKAISDLKAASKLKNDNTEAFYKISTLYYQLGDHELSLSEVREC 240
Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK--------- 202
+ + + + + + ++ A + GR A + E
Sbjct: 241 LKLDQDHKRCFAHYKQVKKLNKLIESAEGLIRDGRYTDATSKYESVMKTEPNIAEYTIRS 300
Query: 203 -------RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA-REVVSLIQ 254
+ + ++ A+ EAY+ + DEA ++ + +
Sbjct: 301 KERICHCFSKDEKPVEAIRVCSEVLQMEPDNVNALKDRAEAYLIEEMYDEAIQDYETAQE 360
Query: 255 ERYPQGYWA---RYVETLVK 271
+ L+K
Sbjct: 361 HNENDQQIREGLEKAQRLLK 380
>gi|226486966|emb|CAX75348.1| O-glycosyltransferase [Schistosoma japonicum]
Length = 1063
Score = 38.6 bits (87), Expect = 0.81, Method: Composition-based stats.
Identities = 17/194 (8%), Positives = 39/194 (20%), Gaps = 6/194 (3%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
A + + A + + P R L + + E
Sbjct: 138 NLAAALVAAGDMESAVNAYATALQYNPDLYCVRSDLGNLLKALGRLDEAKSCYLKAIETC 197
Query: 122 ---TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
+ + + +++ A
Sbjct: 198 PTFAVAWSNLGCVFNAQNEIWLAIHHFEKAVTLDPTFLDAYVNLGNVLKEARIFDRAVAA 257
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
A + Y ++ AI ++ + + +A L A
Sbjct: 258 YLRALTLSPNNAVVHGNLACVYYEQNLIDLAIDTYKRAIELQPNFP---DAYCNLANALK 314
Query: 239 ALALMDEAREVVSL 252
+ EA E +
Sbjct: 315 EKGKVSEAEEYYNT 328
>gi|212704558|ref|ZP_03312686.1| hypothetical protein DESPIG_02618 [Desulfovibrio piger ATCC 29098]
gi|212671957|gb|EEB32440.1| hypothetical protein DESPIG_02618 [Desulfovibrio piger ATCC 29098]
Length = 611
Score = 38.6 bits (87), Expect = 0.81, Method: Composition-based stats.
Identities = 24/231 (10%), Positives = 66/231 (28%), Gaps = 7/231 (3%)
Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKE-QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102
+V + + A + ++ A E ++ RD+P + ++ +
Sbjct: 112 EEVARQHDSSRLADDALLRAARIRADRLKDTRGALELLDRLCRDYPRGDMYAEARRLQQE 171
Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
+ + + A + P + + + +
Sbjct: 172 LAPAKTAARPAVQPARQISDTPPADDARQALQRYENAKKTMELLRADKRRSCWRE----P 227
Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLA-AKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
++ Y V+ A + +Y A V +
Sbjct: 228 WENLQGDFMQVYQSRPNATVSAAALFRAGVSARSLADCSHLAADYRTARTLLLRVPEEFP 287
Query: 222 DAEHAEEAMARLVE-AYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+ A++A+ + + + L EA +++ +++ YP+G L +
Sbjct: 288 GSALADDALLQAAQISAEELKDRAEAMRLLARLEKEYPRGDMRPQATALRQ 338
>gi|209528250|ref|ZP_03276715.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira maxima CS-328]
gi|209491322|gb|EDZ91712.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira maxima CS-328]
Length = 594
Score = 38.6 bits (87), Expect = 0.81, Method: Composition-based stats.
Identities = 28/216 (12%), Positives = 59/216 (27%), Gaps = 9/216 (4%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
+ + + ++A +L++ A + Q + P + V K L +
Sbjct: 13 KEILQKSVQFLQQQAEAYLQQGQVDDARKACEQLLKIQPTSAVGLKILGDVSLRGGDLEG 72
Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
+Q + E + E Y + Q + + +
Sbjct: 73 AKQNYTKALELQPNWAEVYANLGSLYARSQQWEQAQAAYQKAISIKPEFAGAYRNLAKVW 132
Query: 170 TNSPYVKG-----ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
T + Y A + + +G +++G A +Q + +
Sbjct: 133 TQLNRPLDAIRTQYKAYTLEPHTVSAQEHLALGDGLMQQGMAAEAQACYQNAINLNPN-- 190
Query: 225 HAEEAMARLVEAYVALALMDEAREVVSL-IQERYPQ 259
A L EA + EA I+ P
Sbjct: 191 -LAAAYQNLGEALKQQGKLQEAATYFRKAIELNNPS 225
>gi|171915546|ref|ZP_02931016.1| hypothetical protein VspiD_30275 [Verrucomicrobium spinosum DSM
4136]
Length = 986
Score = 38.6 bits (87), Expect = 0.81, Method: Composition-based stats.
Identities = 28/243 (11%), Positives = 59/243 (24%), Gaps = 23/243 (9%)
Query: 48 LDSVTDVRYQREVYEKAVLFLKE-------QNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
+ + D ++ YEKA ++F KA F + R
Sbjct: 245 IVKLGDSLADKDQYEKASKVYLNVMPPDQVKSFQKARIEFLERRIAANVGAAQRNPAQAL 304
Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK---- 156
+ +A + + + + +
Sbjct: 305 TYQGQNADFQWVLDQAKALLAEFEKLPDYMPSLMLRNARCWYGREKKWESVLVNNRLMAL 364
Query: 157 ---------LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK---EVEIGRYYLKRG 204
+ + + A + A G ++ G
Sbjct: 365 YPEAKTEVEAAMFSNVVALADLLQVKTCQKACQEYLQAFPKGANAGTVAYIQGAVAMQAG 424
Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
E A F +++ N + E+ AY +L + EA V ++P+G
Sbjct: 425 ELREAANLFGVLVENQPNGTFTEQMYMMQGSAYFSLGELAEALRVYKRYIAKFPKGASFE 484
Query: 265 YVE 267
+
Sbjct: 485 EAQ 487
>gi|326433829|gb|EGD79399.1| tetratricopeptide repeat domain-containing protein [Salpingoeca sp.
ATCC 50818]
Length = 903
Score = 38.6 bits (87), Expect = 0.82, Method: Composition-based stats.
Identities = 15/190 (7%), Positives = 47/190 (24%), Gaps = 6/190 (3%)
Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL--GEEYI 121
A ++ + + +A E + + + + Y Q+ + +
Sbjct: 337 ARAYVNKGKYDRAIELLQEVLKIKESTFGHDHPSTANTYHGLGKAWYHQSKYDEAIKNFE 396
Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
T + + + + + +D+ Y + + +
Sbjct: 397 TAFEIQRRTLGEEHTDTATTYHSLGLAHHDKGDCDTADSYYQKALSIRVREL-GENHPDT 455
Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
+ N ++ + + + +++D E L Y
Sbjct: 456 ASTYNNLGQMYNSRGNYVQAEKYFKKSLNIKADKLSDDHADTAATE---HNLGHLYDNKG 512
Query: 242 LMDEAREVVS 251
D A +
Sbjct: 513 EHDRAIKHYK 522
>gi|226486968|emb|CAX75349.1| O-glycosyltransferase [Schistosoma japonicum]
Length = 1045
Score = 38.6 bits (87), Expect = 0.82, Method: Composition-based stats.
Identities = 17/194 (8%), Positives = 39/194 (20%), Gaps = 6/194 (3%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
A + + A + + P R L + + E
Sbjct: 120 NLAAALVAAGDMESAVNAYATALQYNPDLYCVRSDLGNLLKALGRLDEAKSCYLKAIETC 179
Query: 122 ---TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
+ + + +++ A
Sbjct: 180 PTFAVAWSNLGCVFNAQNEIWLAIHHFEKAVTLDPTFLDAYVNLGNVLKEARIFDRAVAA 239
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
A + Y ++ AI ++ + + +A L A
Sbjct: 240 YLRALTLSPNNAVVHGNLACVYYEQNLIDLAIDTYKRAIELQPNFP---DAYCNLANALK 296
Query: 239 ALALMDEAREVVSL 252
+ EA E +
Sbjct: 297 EKGKVSEAEEYYNT 310
>gi|149375013|ref|ZP_01892786.1| type IV pilus biogenesis protein PilF [Marinobacter algicola DG893]
gi|149360902|gb|EDM49353.1| type IV pilus biogenesis protein PilF [Marinobacter algicola DG893]
Length = 260
Score = 38.6 bits (87), Expect = 0.82, Method: Composition-based stats.
Identities = 26/249 (10%), Positives = 69/249 (27%), Gaps = 11/249 (4%)
Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVY-EKAVLFLKEQNFSKAYEYFNQCS 84
+ + F+ G + D D Y + ++ + N +A + +
Sbjct: 5 LVVVLLAMFVAGCVTNT--DSRFAREADRDKAIRNYVQLGTAYIGQNNLERARHHLERAL 62
Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL---VGMSY 141
A ++ + + +++ E Y + +
Sbjct: 63 ELDSDDPGALAAMGLIYNAEGEPELAERSFKESLESDQGYTRGRVYYGAFLYGAGRFEDS 122
Query: 142 AQMIRDVPYDQRATKLMLQYMSRIV--ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
+ D + + + ER N A A + + R
Sbjct: 123 REQFLAASRDTSYNDRASVFFNLGLTEERIGNLEGATTAYRRAVDLSRGDAKSLLALSRT 182
Query: 200 YLKRGEYVAAIPRFQ---LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
++ GE+ AA + ++ + H+ E++ + L + + L++
Sbjct: 183 LVESGEHQAASRHYSRLMTLMQRNQNLRHSPESLYTGIRIARHLGDRNRESSLALLLKNN 242
Query: 257 YPQGYWARY 265
+P +
Sbjct: 243 FPNSVEYQQ 251
>gi|160707933|ref|NP_001104256.1| intraflagellar transport protein 88 homolog [Bos taurus]
Length = 825
Score = 38.6 bits (87), Expect = 0.82, Method: Composition-based stats.
Identities = 20/212 (9%), Positives = 47/212 (22%), Gaps = 6/212 (2%)
Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD---FPFAGVARKSLLMSAFVQYSAG 108
+D + K ++ KA E++ + R+ A A
Sbjct: 480 SDRYNPSALTNKGNTVFANGDYEKAAEFYKEALRNDCSCTEALYNIGLTYKKLNRLDEAL 539
Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
Q Y + + + L + + +
Sbjct: 540 DCFLKLHAILRNSAQVLYQIANVYELMEDPSQAMEWLMQLISVVPTDSRALSKLGGLYDS 599
Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
+ + +G YY+ AI F+ +
Sbjct: 600 EGDKSQAFQYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAIQYFERASLIQPTQVKWQ- 658
Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQG 260
+ + +A + I ++P+
Sbjct: 659 --LMVASCFRRSGNYQKALDTYKDIHRKFPEN 688
>gi|118594695|ref|ZP_01552042.1| hypothetical protein MB2181_03465 [Methylophilales bacterium
HTCC2181]
gi|118440473|gb|EAV47100.1| hypothetical protein MB2181_03465 [Methylophilales bacterium
HTCC2181]
Length = 392
Score = 38.6 bits (87), Expect = 0.82, Method: Composition-based stats.
Identities = 27/241 (11%), Positives = 68/241 (28%), Gaps = 12/241 (4%)
Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
+ + F G ++R +++ Y K V +L + KA + F +
Sbjct: 9 ILVIPFFFGLGWIAARIDIKQIISESTDFPAAYFKGVHYLITNQYDKATDSFTAAVKAND 68
Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
+ +L + ++ + + + E + + V + Y +
Sbjct: 69 NSMETHFALG--SLLRRTGQIDKAISLHLELLENREMSIGQQESVKAELAQDYFKAGLYD 126
Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK----------EVEIGR 198
++ L + YV + V + K
Sbjct: 127 RSEELLLSLTKDSYEQFKHNTLLEIYVTEREWKKAVSMAEQLEKISGVSLRKEISHYYCE 186
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
+ + +L + ++ A L + + ++DEA I+ + P
Sbjct: 187 MAVSMILSKNMNDASKFLLRAIDEHKNCVRANILLGDIHEGKGMIDEAVSYWRKIEYQKP 246
Query: 259 Q 259
+
Sbjct: 247 E 247
>gi|86159741|ref|YP_466526.1| hypothetical protein Adeh_3322 [Anaeromyxobacter dehalogenans
2CP-C]
gi|85776252|gb|ABC83089.1| tetratricopeptide repeat protein [Anaeromyxobacter dehalogenans
2CP-C]
Length = 1193
Score = 38.6 bits (87), Expect = 0.82, Method: Composition-based stats.
Identities = 9/68 (13%), Positives = 24/68 (35%), Gaps = 1/68 (1%)
Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD-EAREVVSLIQERYP 258
R A+ ++ +++ Y +E + L E D +A + + +++P
Sbjct: 153 QQSRRLQEQAVALYKAIISRYPSYPRLDEVLYFLGENLSRRDRNDPDALKAYRALIQKFP 212
Query: 259 QGYWARYV 266
+
Sbjct: 213 SSRYVPDA 220
Score = 37.9 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 26/203 (12%), Positives = 59/203 (29%), Gaps = 13/203 (6%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
++ Y+ A L + F +A + F + + D P +A S + G
Sbjct: 582 QPRGEKWVEIAYKLANLHYRHNAFGEASDLFTRIALDHPQHELAGYSANLVLDAYNLLGD 641
Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
++ + + + + Q V ++ + + + +
Sbjct: 642 WRNVNGWAKRFYDNRALIAAHPQLKDDLSRVIEQSAFKVIEEKEKAQDFVGAAEQYLA-- 699
Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL-KRGEYVAAIPRFQLVLANYSDAEHAEE 228
F ++LA + A+ + L Y + A +
Sbjct: 700 ----------FARDWPASRLAPTAYYNASVDYVRAHRLDRAMEIREQFLQRYPTHQLAPK 749
Query: 229 AMARLVEAYVALALMDEAREVVS 251
++ EAY A+A A +
Sbjct: 750 SLYDNAEAYEAVADFGRAADHYE 772
>gi|332162638|ref|YP_004299215.1| putative fimbrial biogenesis protein [Yersinia enterocolitica
subsp. palearctica 105.5R(r)]
gi|325666868|gb|ADZ43512.1| putative fimbrial biogenesis protein [Yersinia enterocolitica
subsp. palearctica 105.5R(r)]
Length = 249
Score = 38.6 bits (87), Expect = 0.83, Method: Composition-based stats.
Identities = 33/252 (13%), Positives = 69/252 (27%), Gaps = 17/252 (6%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
K + L G S V + R + + +L + + + A +
Sbjct: 1 MKLTRLWRVCLIATVLAGCSGSSPEKVSQSAAGQTRL-----QLGLEYLTQGDLTAARQN 55
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
+ P ++ L AF + G+ A ++ + P + V Y
Sbjct: 56 LEKAVAADPQD---YRAQLGMAFYEQRIGENDAAEQRYQQAMKLAPGNGTVLNNYGAFLC 112
Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN------QLAAKE 193
S Q + A ++ + N+ Y R + +
Sbjct: 113 SLGQYVLAQQQFSAAVLS--PDYGQVADSLENAGYCFLRANQNDQARVLLSRALKYDPDK 170
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDA-EHAEEAMARLVEAYVALALMDEAREVVSL 252
E +R + QL+L Y + E++ + D +
Sbjct: 171 GEPLLAEAQRHFGEGNRAQAQLLLDVYQHILPASAESLWLQIRFAALAGRQDSVQRYGKQ 230
Query: 253 IQERYPQGYWAR 264
+ +PQ +
Sbjct: 231 LARSFPQSKQYQ 242
>gi|298249263|ref|ZP_06973067.1| ATP-dependent transcriptional regulator, MalT-like, LuxR family
[Ktedonobacter racemifer DSM 44963]
gi|297547267|gb|EFH81134.1| ATP-dependent transcriptional regulator, MalT-like, LuxR family
[Ktedonobacter racemifer DSM 44963]
Length = 889
Score = 38.6 bits (87), Expect = 0.83, Method: Composition-based stats.
Identities = 25/236 (10%), Positives = 59/236 (25%), Gaps = 11/236 (4%)
Query: 19 LYKFALTIFFSIAVCFLVGWER-QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
L + +++ IA F G ++ D+ + + ++ +A
Sbjct: 499 LMRSLISLCLGIAFRFQNGLAARKALEQAIRDAESPHVSLLSLEHLGYQLQEQGQLHQAL 558
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
E + Q R P + + + ++ + + + K D +
Sbjct: 559 EIYQQALRLQPEGKMTASMWMAYLGIANVHLEWNELEHAEQALLQALKLGKERDVPAAFL 618
Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
++ + +Q L L +V
Sbjct: 619 EITVLLALIKQAQEQIDESLALLRREEMVGHQKQFAPAIQVTRAYQALLEVRRGHVQAAI 678
Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+ F+ +Y E L +A EA V++ +
Sbjct: 679 PWMRD----------FEQQTVSYPLTSRNEREYHILARVQLAAGNDAEAERVLAQM 724
>gi|291536706|emb|CBL09818.1| Tetratricopeptide repeat [Roseburia intestinalis M50/1]
gi|291537989|emb|CBL11100.1| Tetratricopeptide repeat [Roseburia intestinalis XB6B4]
Length = 454
Score = 38.6 bits (87), Expect = 0.83, Method: Composition-based stats.
Identities = 16/114 (14%), Positives = 34/114 (29%), Gaps = 4/114 (3%)
Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
L ++ + + V + + K E + ++ + +
Sbjct: 341 NALGNVNEEYLSDSAKSVYETINAQVNADYLESLYNQGYSDYNSQKFEESITSLQKVVDM 400
Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
Y D A+ L +AY ++ A+ I E YP A + +
Sbjct: 401 EETYKDG----YALYYLAQAYRKNNDLETAKTYYQKIVELYPGTERAANAQNYI 450
>gi|237709510|ref|ZP_04539991.1| TPR domain-containing protein [Bacteroides sp. 9_1_42FAA]
gi|229456566|gb|EEO62287.1| TPR domain-containing protein [Bacteroides sp. 9_1_42FAA]
Length = 598
Score = 38.6 bits (87), Expect = 0.83, Method: Composition-based stats.
Identities = 27/250 (10%), Positives = 68/250 (27%), Gaps = 11/250 (4%)
Query: 21 KFALTIFFSIAVCFLVGWE-----RQSSRDVYLDSVTDVRYQRE------VYEKAVLFLK 69
+ + + LV S + + D + + +A+ +
Sbjct: 1 MKYVPMLCVCLIGMLVSCGTVKRTSGVSGNKAVVEEKDPLTPEQRRKYDYFFLEALRMKE 60
Query: 70 EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129
+ + A+E ++ C +P + K ++A + + K
Sbjct: 61 KGDLDAAFEMYSHCLDIYPQGAATLFEISRFHMFLNQPEKGEEALKKAVDADPKSFWYKQ 120
Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
YY +Y + I L+ + +++ YT + + +
Sbjct: 121 TLAAYYQGKGNYPKAIYVYEDMASQFPSRLEPLMALIDLYTRTKDYQQVVNTLNRLEALD 180
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
E + F + + + + L + Y+ +EA E
Sbjct: 181 GKSEQISMEKFRMYLAMNNDQQAFTEIENLAKEYPYDMRYLTILGDVYLNNGKEEEAYET 240
Query: 250 VSLIQERYPQ 259
+ + P
Sbjct: 241 YQKVLKEEPG 250
>gi|213585273|ref|ZP_03367099.1| outer membrane protein assembly complex subunit YfiO [Salmonella
enterica subsp. enterica serovar Typhi str. E98-0664]
Length = 99
Score = 38.6 bits (87), Expect = 0.83, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 40/85 (47%)
Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
D + + S++V Y NS Y A + +++LA E + YY RG +VA
Sbjct: 13 DRDPQHARAAFNDFSKLVRSYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTARGAWVA 72
Query: 209 AIPRFQLVLANYSDAEHAEEAMARL 233
+ R + +L NY D + +A+ +
Sbjct: 73 VVNRVEGMLRNYPDTQATRDALPLM 97
>gi|327273355|ref|XP_003221446.1| PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP4-like [Anolis
carolinensis]
Length = 433
Score = 38.6 bits (87), Expect = 0.83, Method: Composition-based stats.
Identities = 24/191 (12%), Positives = 53/191 (27%), Gaps = 5/191 (2%)
Query: 74 SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
KA + + + + + + + + ES ++
Sbjct: 183 DKALQKMEKLEECVIYLKPSYGFGSAGKQKFQIPPDAELQYEIKLKSFEKAKESWEMNTD 242
Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
L S A+ + + K +IV + + A
Sbjct: 243 EKLEQGSIAKEKGTQYFKEGKYKRATLQYKKIVSWLEHETGLSDEEESKAKSLRLAAHLN 302
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+ + LK + + E+ + R EA++A+ + ARE +
Sbjct: 303 LAMCHLKLKEYSH-----VLENCNKALELDNSNEKGLFRRGEAHLAVNDFELAREDFQKV 357
Query: 254 QERYPQGYWAR 264
+ YP A+
Sbjct: 358 LQLYPSNKAAK 368
>gi|313150064|ref|ZP_07812257.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|313138831|gb|EFR56191.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
Length = 499
Score = 38.6 bits (87), Expect = 0.83, Method: Composition-based stats.
Identities = 27/266 (10%), Positives = 57/266 (21%), Gaps = 20/266 (7%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQ----------SSRDVYLDSVTDVRYQREVYEKAVLFL 68
+ K +I + L S D + + + +Y+
Sbjct: 1 MKKIYKSITLVATILSLSSCGNDWLDRKPADGIPSEDAITNYNDALTARTGMYDGIQGNS 60
Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
++ A ++ R + S + + +
Sbjct: 61 NSTSYYGARMFYYGDVRAEDMQARTQGMRSSSCYEMRYTVDDAPNMWNIPYNVVRRANRL 120
Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
V + I + + + L + + R PY + V
Sbjct: 121 IQAINEKKVTDATEAQIGKIYSEALVVR-ALVHFDLV--RIYGMPYTADNGASLGVPVIL 177
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQL-------VLANYSDAEHAEEAMARLVEAYVALA 241
+ ++ Y I + A A L Y+
Sbjct: 178 KPLERNDLPSRNTVAEVYTQVIRDLTDAINSGYLAKDKTQGYINEWAAKALLTRVYLTKG 237
Query: 242 LMDEAREVVSLIQERYPQGYWARYVE 267
+ A +V I P W
Sbjct: 238 DNENALKVAEDIITNSPYKLWTNEEY 263
>gi|226486964|emb|CAX75347.1| O-glycosyltransferase [Schistosoma japonicum]
Length = 1045
Score = 38.6 bits (87), Expect = 0.83, Method: Composition-based stats.
Identities = 17/194 (8%), Positives = 39/194 (20%), Gaps = 6/194 (3%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
A + + A + + P R L + + E
Sbjct: 120 NLAAALVAAGDMESAVNAYATALQYNPDLYCVRSDLGNLLKALGRLDEAKSCYLKAIETC 179
Query: 122 ---TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
+ + + +++ A
Sbjct: 180 PTFAVAWSNLGCVFNAQNEIWLAIHHFEKAVTLDPTFLDAYVNLGNVLKEARIFDRAVAA 239
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
A + Y ++ AI ++ + + +A L A
Sbjct: 240 YLRALTLSPNNAVVHGNLACVYYEQNLIDLAIDTYKRAIELQPNFP---DAYCNLANALK 296
Query: 239 ALALMDEAREVVSL 252
+ EA E +
Sbjct: 297 EKGKVSEAEEYYNT 310
>gi|255532994|ref|YP_003093366.1| hypothetical protein Phep_3107 [Pedobacter heparinus DSM 2366]
gi|255345978|gb|ACU05304.1| hypothetical protein Phep_3107 [Pedobacter heparinus DSM 2366]
Length = 924
Score = 38.6 bits (87), Expect = 0.83, Method: Composition-based stats.
Identities = 11/93 (11%), Positives = 29/93 (31%), Gaps = 8/93 (8%)
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
+ A A + + A+ + ++A+ L + +
Sbjct: 205 YLKAAYYYDLGAWSRSAKTSGINFTFRMYLAADMLEQIAAS-ENDPLYDKAIYLLAKIHY 263
Query: 239 ALALMD-------EAREVVSLIQERYPQGYWAR 264
L D EA++ ++++ +YP +
Sbjct: 264 WLNREDYDPYHDAEAKKYFTILKTKYPDADLIK 296
>gi|254423059|ref|ZP_05036777.1| Transglycosylase SLT domain protein [Synechococcus sp. PCC 7335]
gi|196190548|gb|EDX85512.1| Transglycosylase SLT domain protein [Synechococcus sp. PCC 7335]
Length = 771
Score = 38.6 bits (87), Expect = 0.84, Method: Composition-based stats.
Identities = 26/221 (11%), Positives = 60/221 (27%), Gaps = 6/221 (2%)
Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
D + + + QN+++A + + + R A + + +
Sbjct: 272 SEYNDELTAEDWAAIGFGYWETQNYAEAGDAYAKAPRTPLNLYRAARGKERGDKDKEAIV 331
Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM------LQYM 162
YQ N+ + + +
Sbjct: 332 LYQMLDKAFPAEPETADGLLNLAGLQKGQSALATLDEVVGRFSNSFPDKAAEAIADRATL 391
Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
+ + + + G A ++ + K AI Q ++
Sbjct: 392 LESLGSAEVAKQAQDSILSEYSGSKAAAQIRLKRAKENAKANNLTGAISWAQQLVDAAPS 451
Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
E A EA L + + +D+AR+ + +P+ Y+A
Sbjct: 452 GERAAEAGFWLGKWHSQQDQVDQARKAFENVIVNHPESYYA 492
>gi|171915620|ref|ZP_02931090.1| hypothetical protein VspiD_30655 [Verrucomicrobium spinosum DSM
4136]
Length = 962
Score = 38.6 bits (87), Expect = 0.84, Method: Composition-based stats.
Identities = 18/198 (9%), Positives = 45/198 (22%), Gaps = 4/198 (2%)
Query: 57 QREVYEKAVLFLKE--QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
++++ +A+ E + F A + K + K
Sbjct: 453 EQDLNREALDAFAEVPKRFPAATAVVEDAWYWGGMSLSLDKQHAAARSRMEDYLKRYTEK 512
Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV--ERYTNS 172
+ + ++ + + + E +
Sbjct: 513 GAHAAEARFRIAFSSFGLSEHARAINELGAFLKREPGTLMAEEAKLLLGDALGAEGRIDE 572
Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232
A + G Y + F + + N+ + EA+
Sbjct: 573 ALRAYAEVNPKLNARFAEEAVFRTGNIYKLAERFDEMQDHFSVFVRNHPRSARVAEAVYW 632
Query: 233 LVEAYVALALMDEAREVV 250
L + +EAR+
Sbjct: 633 LSWIHDTTGHREEARKAA 650
Score = 36.3 bits (81), Expect = 5.2, Method: Composition-based stats.
Identities = 22/212 (10%), Positives = 56/212 (26%), Gaps = 21/212 (9%)
Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
+ ++ + + L++ +A + F + + FP A + G
Sbjct: 433 KHPQHALAPQCLFMEGICLLEQDLNREALDAFAEVPKRFPAATAVVEDAWYWG------G 486
Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
++ + I + + + ++R
Sbjct: 487 MSLSLDKQHAAARSRMEDYLKRYTEKGAHAAEARFRIAFSSFGLSEHARAINELGAFLKR 546
Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
+ + A+ + + + Y + +A AEE
Sbjct: 547 EPGTLMAEEAKLLLGDALGAEGRIDEALRAYAEVNPKL---------------NARFAEE 591
Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQG 260
A+ R Y DE ++ S+ +P+
Sbjct: 592 AVFRTGNIYKLAERFDEMQDHFSVFVRNHPRS 623
Score = 35.9 bits (80), Expect = 6.2, Method: Composition-based stats.
Identities = 7/69 (10%), Positives = 19/69 (27%), Gaps = 5/69 (7%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K + + Q++ E++ A +++KA
Sbjct: 1 MLKPTTSFILLLLWWLSFALSHQAT-----AQDATELTPTELFNVARTAFDSGDWAKAET 55
Query: 79 YFNQCSRDF 87
F + +
Sbjct: 56 LFAKFIDTY 64
>gi|164688410|ref|ZP_02212438.1| hypothetical protein CLOBAR_02055 [Clostridium bartlettii DSM
16795]
gi|164602823|gb|EDQ96288.1| hypothetical protein CLOBAR_02055 [Clostridium bartlettii DSM
16795]
Length = 478
Score = 38.6 bits (87), Expect = 0.84, Method: Composition-based stats.
Identities = 14/81 (17%), Positives = 26/81 (32%), Gaps = 1/81 (1%)
Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
+ A Y + G+Y AI ++ L + E+A+ + +Y L D A
Sbjct: 354 KGAENLYFSANKYKQAGDYKTAIKYYEYSLKANDTYKFREDAIYNMALSYQKLGDDDNAI 413
Query: 248 EVVSLIQERYP-QGYWARYVE 267
+ Y +
Sbjct: 414 KYYKKFVNTYKASSNFYDDSY 434
>gi|157414221|ref|YP_001485087.1| TPR-repeat pilus assembly protein TadD [Prochlorococcus marinus
str. MIT 9215]
gi|157388796|gb|ABV51501.1| Flp pilus assembly protein TadD, contains TPR repeats
[Prochlorococcus marinus str. MIT 9215]
Length = 262
Score = 38.6 bits (87), Expect = 0.84, Method: Composition-based stats.
Identities = 25/256 (9%), Positives = 66/256 (25%), Gaps = 16/256 (6%)
Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
+L L IF + + ++ S + ++++ A+ F+
Sbjct: 4 FKKLKVCFLLIFIFLNIFYIAPCYSLSLK-------------EDLFKNALDLSSGGKFNL 50
Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
A + +NQ +P A + V + + +
Sbjct: 51 ALQEWNQYLDSYPDDAAALSNRGNVRLVIGDVKGSIDDQNKAISLNPSEIDPYINRGIAE 110
Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK---GARFYVTVGRNQLAAK 192
++Q +D + + ++ + + A
Sbjct: 111 EALGQWSQAKKDYMLVISQDSKNFSALYNLANVEGSTSHWDKARDLFAKAALYNPGFAMA 170
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ + G + + ++ Y A A+ L + + V+
Sbjct: 171 RSSLALADFQLGNIDKSEKELKNLIRRYPTFADARAALTALNWSKGEAGKAESNWIAVTE 230
Query: 253 IQERYPQGYWARYVET 268
+ RY W + +
Sbjct: 231 LDPRYSDEEWLKKIRR 246
>gi|118346323|ref|XP_977150.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89288407|gb|EAR86395.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 1766
Score = 38.6 bits (87), Expect = 0.84, Method: Composition-based stats.
Identities = 25/211 (11%), Positives = 60/211 (28%), Gaps = 3/211 (1%)
Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
+L+ +++ + EYF + + P A K L S + E +
Sbjct: 1490 GSQYLEIKSYEECNEYFLKAIQIHPQNSFAYKCLGHSFLNLKKLDEAVIHLHKSIEINPE 1549
Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
+ N+ V Y + + + + + Y + + +++
Sbjct: 1550 ISHAHNLLGVCYERMLLEDKAEQQYKIAHNLHPQQWLPLRNLGLLYLRKKNFQESEYWLK 1609
Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243
N + K+ + + EE + + + Y L
Sbjct: 1610 KSMNIIPNKQDPLIKLSFLYFNQSKYEEALVYCKKALEIDPLKEEPIQNIAKIYYHLGQY 1669
Query: 244 DEA---REVVSLIQERYPQGYWARYVETLVK 271
DEA ++ + E + + +K
Sbjct: 1670 DEAINRQKKAIQMNENMEKNMYFTLAYAYLK 1700
>gi|89900878|ref|YP_523349.1| hypothetical protein Rfer_2094 [Rhodoferax ferrireducens T118]
gi|89345615|gb|ABD69818.1| Tetratricopeptide TPR_2 [Rhodoferax ferrireducens T118]
Length = 259
Score = 38.6 bits (87), Expect = 0.84, Method: Composition-based stats.
Identities = 20/113 (17%), Positives = 40/113 (35%), Gaps = 14/113 (12%)
Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
++RY + Y A F++ G +Y A+ F+ ++
Sbjct: 157 AQSVFLEFLKRYPATGYGPSALFWL--------------GNAQYATRDYKEAMINFRSLI 202
Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
A + A EA+ + + L AR+ + + + YPQ A + +
Sbjct: 203 AREPEHVRAPEAVLSIANCQIELKDTRGARKTLEDLIKAYPQSEAAIAAKERL 255
>gi|77461692|ref|YP_351199.1| hypothetical protein Pfl01_5471 [Pseudomonas fluorescens Pf0-1]
gi|77385695|gb|ABA77208.1| conserved hypothetical protein [Pseudomonas fluorescens Pf0-1]
Length = 457
Score = 38.6 bits (87), Expect = 0.84, Method: Composition-based stats.
Identities = 27/257 (10%), Positives = 59/257 (22%), Gaps = 12/257 (4%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + L + L G + D+ + D R Y+ A+ L+ N + +
Sbjct: 1 MRQRLLLPVLISTILQLSGCAAYRNYDLEMQQTND-RLMLGDYQGALDVLEWHNPWEDKD 59
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+ + + A+ +Q+ ++ + +
Sbjct: 60 LLYYFEKGSILSFANARPQSQKAWRSADRMVFQREEAVPSAPMKLLNRFAYEMGTLLVND 119
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
D ++ L + + + + ++ E
Sbjct: 120 KLSRYEGYDYEKVMLTIQMALNQLGE--SDFDGARADIKKTHEREALIARQRERQYEELE 177
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEE---------AMARLVEAYVALALMDEAREV 249
K V + DA E + Y AL D A
Sbjct: 178 EQAKAQGIVVQYKDLRGYPVTTLDAPAVTELKNGYQSAFSHYLAGFTYEALGERDLAAPG 237
Query: 250 VSLIQERYPQGYWARYV 266
E P +
Sbjct: 238 YRQAIELRPNTPFLEQA 254
>gi|88800187|ref|ZP_01115755.1| hypothetical protein MED297_13857 [Reinekea sp. MED297]
gi|88777033|gb|EAR08240.1| hypothetical protein MED297_13857 [Reinekea sp. MED297]
Length = 248
Score = 38.6 bits (87), Expect = 0.84, Method: Composition-based stats.
Identities = 16/108 (14%), Positives = 41/108 (37%), Gaps = 1/108 (0%)
Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG-RYYLKRGEYVAAIPRFQLVLANYSDA 223
++++ + K A F + L YL + A FQ ++++YS+
Sbjct: 139 MLDKKFDESISKLAIFAKKHPDHPLTPNAWYWIGEIYLVQRNNEEAQNAFQRIVSDYSEH 198
Query: 224 EHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+ +++ +L + +A + + YP A+ + ++
Sbjct: 199 DKVPDSLYKLGVIAQQSSQTQQASAYFERVIQNYPNTQSAKLAKARLE 246
>gi|238752477|ref|ZP_04613953.1| Type IV pilus bioproteinsis/stability protein PilW [Yersinia rohdei
ATCC 43380]
gi|238709326|gb|EEQ01568.1| Type IV pilus bioproteinsis/stability protein PilW [Yersinia rohdei
ATCC 43380]
Length = 249
Score = 38.6 bits (87), Expect = 0.85, Method: Composition-based stats.
Identities = 32/252 (12%), Positives = 68/252 (26%), Gaps = 17/252 (6%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
K + L G S + + R + + +L + + A +
Sbjct: 1 MKLTKLWRVCLIATVLAGCSGSSPENASQPAAGQTRL-----QLGLEYLAQGDLKAARQN 55
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
+ P ++ L AF + G+ A ++ + P + V Y
Sbjct: 56 LEKAVAADPQD---YRAQLGMAFYEQRIGENDAAEQRYQQAMKLAPGNGTVLNNYGAFLC 112
Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN------QLAAKE 193
S Q + A ++ + N+ Y R + +
Sbjct: 113 SLGQYVPAQQQFSAALLS--PDYGQVADSLENAGYCFLRANQNDQARVLLSRALKYDPDK 170
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDA-EHAEEAMARLVEAYVALALMDEAREVVSL 252
E +R + QL+L Y + E++ + D +
Sbjct: 171 GEPLLAEAQRHFGEGNRAQAQLLLDVYQHVLPASAESLWLQIRFAALAGRQDSVQRYGKQ 230
Query: 253 IQERYPQGYWAR 264
+ +PQ +
Sbjct: 231 LARSFPQSKQYQ 242
>gi|225420478|ref|ZP_03762781.1| hypothetical protein CLOSTASPAR_06823 [Clostridium asparagiforme
DSM 15981]
gi|225040881|gb|EEG51127.1| hypothetical protein CLOSTASPAR_06823 [Clostridium asparagiforme
DSM 15981]
Length = 432
Score = 38.6 bits (87), Expect = 0.85, Method: Composition-based stats.
Identities = 14/68 (20%), Positives = 21/68 (30%), Gaps = 3/68 (4%)
Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
G A+ +Q L D EAM + Y D A + + YP
Sbjct: 364 WNAGNTSEAMEYYQASLKIKPD---NPEAMFYVGRLYQIAGDTDNANAMFDQVVGNYPDS 420
Query: 261 YWARYVET 268
+A +
Sbjct: 421 DYASRAQN 428
>gi|72382931|ref|YP_292286.1| TPR repeat-containing protein [Prochlorococcus marinus str. NATL2A]
gi|72002781|gb|AAZ58583.1| TPR repeat [Prochlorococcus marinus str. NATL2A]
Length = 681
Score = 38.6 bits (87), Expect = 0.85, Method: Composition-based stats.
Identities = 22/222 (9%), Positives = 54/222 (24%), Gaps = 6/222 (2%)
Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
+ + + ++ +A+ F + N +A +Y+ A + +
Sbjct: 42 KKENITINTNTPSQPSKEQIINQAIEFHSQGNIPEAAKYYKNFINKGFKDERAFSNYGVI 101
Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV---GMSYAQMIRDVPYDQRATKL 157
+ + + E + ++ R +
Sbjct: 102 LKSLGKLKEAEISTRKAIEIKPDFAKAHYNLGNILNDLGKLKEAEISTRKAIEIKPDYAD 161
Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
+ I+ + + + A +G + G+ A ++ +
Sbjct: 162 AYSNLGNILNDLGKLQEAELSYRKAIEIKPDYAEAHYNLGNLLKELGKLQEAELSYRKAI 221
Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
D EA L L + EA E P
Sbjct: 222 EIKPDF---AEAHYNLGNILNDLGKLQEAELSYRKAIEIKPD 260
>gi|74149301|dbj|BAE22424.1| unnamed protein product [Mus musculus]
Length = 825
Score = 38.6 bits (87), Expect = 0.85, Method: Composition-based stats.
Identities = 18/214 (8%), Positives = 50/214 (23%), Gaps = 10/214 (4%)
Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
+D + K ++ KA E++ + R + + + +
Sbjct: 480 SDRYNPSALTNKGNTVFANGDYEKAAEFYKEALR--NDSSCTEALYNIGLTYKKLNRLDE 537
Query: 112 QAASLGEEYITQYPE-----SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
S + + Y + + + L + +
Sbjct: 538 ALDSFLKLHAILRNSAQVLCQIANIYELMEDPNQAIEWLMQLISVVPTDSQALSKLGELY 597
Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
+ + + +G YY+ AI F+
Sbjct: 598 DSEGDKSQAFQYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAIQYFERASLIQPTQVKW 657
Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
+ + + +A + I ++P+
Sbjct: 658 Q---LMVASCFRRSGNYQKALDTYKEIHRKFPEN 688
Score = 35.9 bits (80), Expect = 5.4, Method: Composition-based stats.
Identities = 21/203 (10%), Positives = 61/203 (30%), Gaps = 7/203 (3%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
KA+ +L++++F++A + + A + L + + + +
Sbjct: 421 NKAITYLRQKDFNQAVDTLKMFEKKDSRVKSAAATNLSFMYYLENEFAQASSYADLAVNS 480
Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVP----YDQRATKLMLQYMSRIVERYTNSPYVKG 177
+Y S + + + + + + L + ++
Sbjct: 481 DRYNPSALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYKKLNRLDEALD 540
Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
+ + A +I Y + AI +++ +A+++L E Y
Sbjct: 541 SFLKLHAILRNSAQVLCQIANIYELMEDPNQAIEWLMQLISVVPTDS---QALSKLGELY 597
Query: 238 VALALMDEAREVVSLIQERYPQG 260
+ +A + +P
Sbjct: 598 DSEGDKSQAFQYYYESYRYFPSN 620
>gi|304317603|ref|YP_003852748.1| glycosyl transferase family 2 [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302779105|gb|ADL69664.1| glycosyl transferase family 2 [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 1807
Score = 38.6 bits (87), Expect = 0.85, Method: Composition-based stats.
Identities = 19/205 (9%), Positives = 53/205 (25%), Gaps = 4/205 (1%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC----SRDFPFAGVARKSLLMSAFVQY 105
Y + ++ ++ + KA E F +C F + + ++
Sbjct: 1434 KKYYEDIPDYKYLEGTIYFNQKRYEKALEIFKECALMGEYKGQFVTMGGTGSYRAKYMIG 1493
Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
+ + + + + ++ + + I
Sbjct: 1494 QCYEKLGKLNDAVKEYMEILKQHPNYQDVFIKVFDMFVRNEKPEDVYEFFRKHVNTKVPI 1553
Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
Y+ R+ + ++E + +
Sbjct: 1554 NYIAIARLYINIGRYDIAKQYIDSIDIDLEGLNNLRGIIYMGLKDYENAIKHFEMEYGKA 1613
Query: 226 AEEAMARLVEAYVALALMDEAREVV 250
EEA R Y+ L +D+A++++
Sbjct: 1614 KEEANYREALCYIILKDIDKAKDLL 1638
>gi|225556678|gb|EEH04966.1| DnaJ domain-containing protein [Ajellomyces capsulatus G186AR]
Length = 745
Score = 38.6 bits (87), Expect = 0.85, Method: Composition-based stats.
Identities = 26/228 (11%), Positives = 59/228 (25%), Gaps = 19/228 (8%)
Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL---LMSAFVQYSAGKYQQAASLGEE 119
F K ++ KA + + + P + + +SA + + A + + A E
Sbjct: 251 AGNKFFKAGDYQKAIQEYTKAVEAQPSSSTYLSNRAAAYISAHLYHEALEDAKLADELEP 310
Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
+ Y + + A
Sbjct: 311 GNQKIMHRLARIYTSLGRPTEALSIYSQIQPPVTAKDKGPAETMLHHVTQAEGSLRDDRG 370
Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY------------SDAEHAE 227
+T+ A K + G ++ + ++ N D
Sbjct: 371 GSMTLYCLDQAVKGLGFGVTQPRKWRLMRVEAYLKMGNVNSLGDAQNIVMSMLRDNNQDP 430
Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQG----YWARYVETLVK 271
+A+ + A ++A + L P + R V+ L++
Sbjct: 431 DALLLRGRLFYAQGENEQAIKHFKLALSLDPDSTQAIRYLRMVQKLLR 478
>gi|152985060|ref|YP_001346693.1| type 4 fimbrial biogenesis protein PilF [Pseudomonas aeruginosa
PA7]
gi|150960218|gb|ABR82243.1| type IV pilus biogenesis/stability protein PilW [Pseudomonas
aeruginosa PA7]
Length = 252
Score = 38.6 bits (87), Expect = 0.85, Method: Composition-based stats.
Identities = 21/247 (8%), Positives = 57/247 (23%), Gaps = 8/247 (3%)
Query: 27 FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86
+ L G ++ + + + +L+ + +A +
Sbjct: 7 LVFLLAIGLTGCVTSGDQNPLKTDKGRDEARDAYIQLGLGYLQRGSTEQAKVPLRKALEI 66
Query: 87 FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146
P + A +L + + + ++ N + Y + R
Sbjct: 67 DPSSVDAHAALAVVFQTEMEPRLADEEYRKALAGDSRNARILNNYGGFLYEQKRYEEAYR 126
Query: 147 DV-----PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
+ + + + + K +E+
Sbjct: 127 RFVEASQDNLYPERSRVFENLGLVSLQLKRPAQAKEYFEKSLRLNRNQPRVALEMADLLY 186
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
+ EYV A + L ++ + D A ++ YP
Sbjct: 187 REREYVPARQYYDLFA---QGGGQNARSLLLGIRLAKVFEDRDTAASYGLQLKRLYPGSP 243
Query: 262 WARYVET 268
+ +
Sbjct: 244 EYKEFQA 250
>gi|110635498|ref|YP_675706.1| tetratricopeptide TPR_2 [Mesorhizobium sp. BNC1]
gi|110286482|gb|ABG64541.1| Tetratricopeptide TPR_2 [Chelativorans sp. BNC1]
Length = 334
Score = 38.6 bits (87), Expect = 0.85, Method: Composition-based stats.
Identities = 18/126 (14%), Positives = 35/126 (27%), Gaps = 14/126 (11%)
Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
+ K + ++ + + A F++
Sbjct: 205 PHSNNPEEIYQSSYQFILSGDYKTAEAGFRQYLDMFPEGEHAADANFWL----------- 253
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
G L + Y A F + +A + E + +L + A+ D A + I
Sbjct: 254 ---GEAMLGQDRYREAAEVFLNANRQFPNASKSPEMLLKLGVSLAAMQQRDVACATYTEI 310
Query: 254 QERYPQ 259
RYP
Sbjct: 311 GHRYPD 316
>gi|317063377|ref|ZP_07927862.1| tetratricopeptide repeat family protein [Fusobacterium ulcerans
ATCC 49185]
gi|313689053|gb|EFS25888.1| tetratricopeptide repeat family protein [Fusobacterium ulcerans
ATCC 49185]
Length = 945
Score = 38.6 bits (87), Expect = 0.86, Method: Composition-based stats.
Identities = 27/246 (10%), Positives = 65/246 (26%), Gaps = 6/246 (2%)
Query: 27 FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86
F+ + +G + S + Y+R +Y+ + +L ++N+ KA E F + +
Sbjct: 96 FYLMRSYTALGDAKNSDFFMESLDKNGDFYERALYDSGMTYLAKENYKKAEELFQRVIQL 155
Query: 87 FPFAGVARKSLLMSAFVQYSAGKYQQA----ASLGEEYITQYPESKNVDYVYYLVGMSYA 142
+ + + K S G++ + Y S
Sbjct: 156 NKKYYSEAVLSMAMSAYNQADYKRTLLFLNEYSNGKDKNKNQSLFNYLYGSAYYKLNSTD 215
Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
I K ++ KE +
Sbjct: 216 DAITYFQKVTSKDKTSSYGKKSVLSLIEIYSNRGDVNSMQKYLAMLENTKEYGEAMRMIG 275
Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER--YPQG 260
+ + ++ + + M + L + EA++ ++ Y Q
Sbjct: 276 DLYATRGEYEKAVSYYSKTNTPNDPKLMYGYGFSLYKLNRLKEAQKYFEGLRNTTYYNQS 335
Query: 261 YWARYV 266
+ +
Sbjct: 336 IYYIFA 341
>gi|305855148|ref|NP_001182266.1| peptidyl-prolyl cis-trans isomerase FKBP4 [Sus scrofa]
gi|285818414|gb|ADC38880.1| FK506 binding protein 4 [Sus scrofa]
Length = 456
Score = 38.6 bits (87), Expect = 0.86, Method: Composition-based stats.
Identities = 24/191 (12%), Positives = 54/191 (28%), Gaps = 5/191 (2%)
Query: 74 SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
KA + + + + + + + + + ES +
Sbjct: 205 EKAIQRMEKGEHSIVYLKPSYAFGSAGKEKFHIPPNAELKYEVHLKSFEKAKESWEMSSE 264
Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
L S + V + + K L +IV + F + A +
Sbjct: 265 EKLEQSSIVKERGTVYFKEGKYKQALVQYKKIVSWLEY-----ESSFSNEDAQKAQALRL 319
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+ + + + + E+ + R EA++A+ D AR +
Sbjct: 320 ASHLNLAMCYLKLQSFSAAIENCNKALELDSNNEKGLFRRGEAHLAVNDFDLARADFQKV 379
Query: 254 QERYPQGYWAR 264
+ YP A+
Sbjct: 380 LQLYPSNKAAK 390
>gi|257469130|ref|ZP_05633224.1| TPR repeat-containing protein [Fusobacterium ulcerans ATCC 49185]
Length = 950
Score = 38.6 bits (87), Expect = 0.86, Method: Composition-based stats.
Identities = 27/246 (10%), Positives = 65/246 (26%), Gaps = 6/246 (2%)
Query: 27 FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86
F+ + +G + S + Y+R +Y+ + +L ++N+ KA E F + +
Sbjct: 101 FYLMRSYTALGDAKNSDFFMESLDKNGDFYERALYDSGMTYLAKENYKKAEELFQRVIQL 160
Query: 87 FPFAGVARKSLLMSAFVQYSAGKYQQA----ASLGEEYITQYPESKNVDYVYYLVGMSYA 142
+ + + K S G++ + Y S
Sbjct: 161 NKKYYSEAVLSMAMSAYNQADYKRTLLFLNEYSNGKDKNKNQSLFNYLYGSAYYKLNSTD 220
Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
I K ++ KE +
Sbjct: 221 DAITYFQKVTSKDKTSSYGKKSVLSLIEIYSNRGDVNSMQKYLAMLENTKEYGEAMRMIG 280
Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER--YPQG 260
+ + ++ + + M + L + EA++ ++ Y Q
Sbjct: 281 DLYATRGEYEKAVSYYSKTNTPNDPKLMYGYGFSLYKLNRLKEAQKYFEGLRNTTYYNQS 340
Query: 261 YWARYV 266
+ +
Sbjct: 341 IYYIFA 346
>gi|209694316|ref|YP_002262244.1| putative type 4 fimbrial biogenesis protein PilF [Aliivibrio
salmonicida LFI1238]
gi|208008267|emb|CAQ78412.1| putative type 4 fimbrial biogenesis protein PilF [Aliivibrio
salmonicida LFI1238]
Length = 253
Score = 38.6 bits (87), Expect = 0.86, Method: Composition-based stats.
Identities = 24/242 (9%), Positives = 62/242 (25%), Gaps = 9/242 (3%)
Query: 28 FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87
+I + G + D D + + + +L N KA E ++
Sbjct: 9 LAIGLLTSAGCVTVNEADEMTDDEIIRASEARI-TLGLGYLNAGNMMKARENLELAAQYA 67
Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY-----YLVGMSYA 142
P ++ SL ++A Y ++ N V+
Sbjct: 68 PDYYRSQTSLAYYYQQVEENELAEKAYKRALRYSSKNGNVLNDYGVFLCRKGRYEEAQQK 127
Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
+ + + ++ K +++ + +
Sbjct: 128 FTLAIEQPYYYLVSASYENAAMCALSSGDNVTAKTYFERSLAHDPHRVRSTLQLAKLNID 187
Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
G Y Y + +++ L+E + +++ ++YP
Sbjct: 188 EGNYSEPRISLFKFNKKY---GYKPVSLSLLIELEKKAGNAHLVTKYANILGQKYPDSKE 244
Query: 263 AR 264
+
Sbjct: 245 YQ 246
>gi|168187019|ref|ZP_02621654.1| putative lipoprotein [Clostridium botulinum C str. Eklund]
gi|169295025|gb|EDS77158.1| putative lipoprotein [Clostridium botulinum C str. Eklund]
Length = 364
Score = 38.6 bits (87), Expect = 0.86, Method: Composition-based stats.
Identities = 17/179 (9%), Positives = 51/179 (28%)
Query: 15 WAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFS 74
+ K+ I I + VG + +V V D++ ++ E + + +
Sbjct: 1 MIKNIKKYTSYILIFITIFMFVGCNKNQYENVKEKDVFDMKTATKIVESYFNYTQADKYD 60
Query: 75 KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
+A + + ++ + + + + + + + + Y
Sbjct: 61 EAGKLLEEKAKTDTKNLKPSELKIKGYRISEVTESGGEGDFKVDVIKSGLSKPETQLIEY 120
Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
+ + + K Q ++I R N+ + + A +
Sbjct: 121 RIKVAKKGMDYKITEVETSLFKEAFQKNNQIRFRRENNVETFLITDMDGIPKYGYAKND 179
>gi|197123793|ref|YP_002135744.1| hypothetical protein AnaeK_3402 [Anaeromyxobacter sp. K]
gi|196173642|gb|ACG74615.1| Tetratricopeptide TPR_2 repeat protein [Anaeromyxobacter sp. K]
Length = 1192
Score = 38.6 bits (87), Expect = 0.86, Method: Composition-based stats.
Identities = 9/68 (13%), Positives = 24/68 (35%), Gaps = 1/68 (1%)
Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD-EAREVVSLIQERYP 258
R A+ ++ +++ Y +E + L E D +A + + +++P
Sbjct: 153 QQSRRLQEQAVALYKAIISRYPSYPRLDEVLYFLGENLSRRDRNDPDALKAYRALIQKFP 212
Query: 259 QGYWARYV 266
+
Sbjct: 213 SSRYVPDA 220
Score = 37.5 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 26/203 (12%), Positives = 58/203 (28%), Gaps = 13/203 (6%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
++ Y+ A L + F +A + F + + D P +A S + G
Sbjct: 582 QPRGEKWVEVAYKLANLHYRHNAFGEASDLFTRIALDHPQHELAGYSANLVLDAYNLLGD 641
Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
++ + + + + Q V ++ + + + +
Sbjct: 642 WRNVNGWAKRFYDNRALIAAHPQLKDDLSRVIEQSAFKVIEEKEKAQDFVGAAEQYLA-- 699
Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL-KRGEYVAAIPRFQLVLANYSDAEHAEE 228
F ++LA + A+ + L Y A +
Sbjct: 700 ----------FARDWPTSRLAPTAYYNASVDYVRAHRLDRAMEIREQFLQRYPTHTLAPK 749
Query: 229 AMARLVEAYVALALMDEAREVVS 251
++ EAY A+A A +
Sbjct: 750 SLYDNAEAYEAVADFGRAADHYE 772
>gi|154148931|ref|YP_001406138.1| competence lipoprotein [Campylobacter hominis ATCC BAA-381]
gi|153804940|gb|ABS51947.1| competence lipoprotein [Campylobacter hominis ATCC BAA-381]
Length = 212
Score = 38.6 bits (87), Expect = 0.86, Method: Composition-based stats.
Identities = 30/198 (15%), Positives = 69/198 (34%), Gaps = 9/198 (4%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ KF + F++ + + G + ++Y + + + +K+ N A E
Sbjct: 1 MKKF---LIFAVFIAIISGCSAKKGDEIY------NLAPQAWFNLIIKDIKDSNLKAADE 51
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
++ S + + + L+ A Y A + +EYI +Y + Y +L
Sbjct: 52 HYVSFSSEHIGSPLLESMTLILAQAHTMEEDYTLANTYLDEYIRRYGTDDKIQYAKFLKI 111
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
S +Q+ ++ + + + +Y ++ Y + R I
Sbjct: 112 KSNFDSFNKPNRNQKLVQISIVEIQNFLMQYPDTKYKPLLETMLIKFRLAENELNKSIKN 171
Query: 199 YYLKRGEYVAAIPRFQLV 216
Y K G +A + +
Sbjct: 172 LYEKTGRDESAQIYKERI 189
>gi|328789632|ref|XP_396581.4| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Apis
mellifera]
Length = 1255
Score = 38.6 bits (87), Expect = 0.87, Method: Composition-based stats.
Identities = 32/231 (13%), Positives = 73/231 (31%), Gaps = 19/231 (8%)
Query: 38 WERQSSRDVYLDSVTDVRYQREVY-EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
+ +Y D + + + Y + + +A ++F R A
Sbjct: 510 CIFDKAEKLYKDILKEHPNYVDCYLRLGCMARDKGQIYEASDWFKDALRINNEHPDAWSL 569
Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
L + G Q+ + T ++ ++ + + + Q +D ++R
Sbjct: 570 LGNLHLAKMEWGPGQKKFERILKNPTTSTDAYSLIALGNIWLQTLHQSGKDKDREKRHQD 629
Query: 157 LMLQYMSRIVERYTNSPY--------------VKGARFYVTVGRNQLAAKEVEI---GRY 199
L +++ + + V AR R A
Sbjct: 630 RALAMYKQVLRNDPKNIWAANGIGAVLAHKGCVNEARDIFAQVREATAEFCDVWLNIAHI 689
Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
Y+++ ++V+AI ++ L + H E + L AY + EA+ +
Sbjct: 690 YVEQKQFVSAIQMYENCLRKFYKYHHV-EVLQYLGRAYFKAGKLKEAKLTL 739
>gi|323256482|gb|EGA40214.1| tol-pal system protein YbgF [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
Length = 75
Score = 38.6 bits (87), Expect = 0.87, Method: Composition-based stats.
Identities = 14/72 (19%), Positives = 28/72 (38%)
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
+G+ A F V+ NY + A +AM ++ +A+ V + +YP
Sbjct: 1 MNYNKGKKDDAAYYFASVVKNYPKSPKAADAMYKVGVIMQDKGDTAKAKAVYQQVINKYP 60
Query: 259 QGYWARYVETLV 270
A+ + +
Sbjct: 61 GTDGAKQAQKRL 72
>gi|296450548|ref|ZP_06892302.1| probable lipoprotein [Clostridium difficile NAP08]
gi|296879330|ref|ZP_06903325.1| probable lipoprotein [Clostridium difficile NAP07]
gi|296260623|gb|EFH07464.1| probable lipoprotein [Clostridium difficile NAP08]
gi|296429873|gb|EFH15725.1| probable lipoprotein [Clostridium difficile NAP07]
Length = 224
Score = 38.6 bits (87), Expect = 0.87, Method: Composition-based stats.
Identities = 15/97 (15%), Positives = 31/97 (31%), Gaps = 12/97 (12%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
L + + + SI FLVG ++ L + +L++ N+ KA E
Sbjct: 6 LMRGRVILLISILSIFLVGCSFNKKDEINLVE------------QGKTYLEKHNYKKAME 53
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
+ + AR + + + +
Sbjct: 54 SLSSALEEDSTNENARAMYMQAMRMSNMTEFEELKNY 90
>gi|293651727|pdb|2WQH|A Chain A, Crystal Structure Of Ctpr3y3
Length = 125
Score = 38.6 bits (87), Expect = 0.87, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 35/116 (30%), Gaps = 3/116 (2%)
Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
D + + + + A +G Y K+G+Y A
Sbjct: 3 MDPGNSAEAWYNLGNAYYKQGDYDEAIEYYQKALELYPNNAEAWYNLGNAYYKQGDYDEA 62
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
I +Q L Y + EA L AY DEA E E YP A+
Sbjct: 63 IEYYQKALELYPN---NAEAWYNLGNAYYKQGDYDEAIEYYQKALELYPNNAEAKQ 115
>gi|300726849|ref|ZP_07060279.1| putative tetratricopeptide repeat domain protein [Prevotella
bryantii B14]
gi|299775962|gb|EFI72542.1| putative tetratricopeptide repeat domain protein [Prevotella
bryantii B14]
Length = 1086
Score = 38.6 bits (87), Expect = 0.88, Method: Composition-based stats.
Identities = 14/63 (22%), Positives = 24/63 (38%)
Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
K + + + NYSD EH ++ L Y + A + +++ YPQ
Sbjct: 589 DKLDNLTLSEKALRRITDNYSDYEHLDDVYYHLFLLYSREGQANRANTYIEKLKDDYPQS 648
Query: 261 YWA 263
W
Sbjct: 649 QWT 651
>gi|254784361|ref|YP_003071789.1| tetratricopeptide repeat domain-containing protein [Teredinibacter
turnerae T7901]
gi|237687029|gb|ACR14293.1| tetratricopeptide repeat domain protein [Teredinibacter turnerae
T7901]
Length = 733
Score = 38.6 bits (87), Expect = 0.88, Method: Composition-based stats.
Identities = 25/221 (11%), Positives = 58/221 (26%), Gaps = 25/221 (11%)
Query: 50 SVTDVRYQREVYEKAVLFLK----EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
T E Y + + +L + N +A +YF A +L
Sbjct: 344 DTTSDILAYEYYMRGMDYLSRPYTQSNNDEAIKYFTTALVHDNQYVDAEAALCE------ 397
Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
A K + + + + + + ++ +Q + ++
Sbjct: 398 -AYKTKYGNLGDVSWFNSAKQHCELALKLDPTHTGAIRTMAEIHRQSGEYDQAIQLIDQV 456
Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG----------EYVAAIPRFQL 215
+ R ++ +N+ A + + +
Sbjct: 457 LAREPDNTPAARLLALTYHDKNESAKGVRILEDCIQRHPKDFVNYKDLARIYLDNGNLEK 516
Query: 216 VLANYSD----AEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ NY A+ L +Y L + +AR+ L
Sbjct: 517 AITNYKKVLEITPQNNAALNNLGISYYFLGELKQARKYFEL 557
>gi|32472482|ref|NP_865476.1| hypothetical protein RB3379 [Rhodopirellula baltica SH 1]
gi|32443718|emb|CAD73160.1| conserved hypothetical protein [Rhodopirellula baltica SH 1]
Length = 1032
Score = 38.6 bits (87), Expect = 0.88, Method: Composition-based stats.
Identities = 25/252 (9%), Positives = 73/252 (28%), Gaps = 12/252 (4%)
Query: 17 YQLYKFALTIFFSIAVCF-LVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
++ Y+ ++ F IA+C + G + S + + + +E + ++ +
Sbjct: 5 FRYYRQSINAIFLIALCVQVAGCTSEPSD---FEKLRKQQQLKEAARQTTELGLDEQIAL 61
Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
A + + + L+ Q + ++ ++ +
Sbjct: 62 AKKEL-ELGSVVRANEIIGPLLISDPDNQDVLRLKAEIQHRLGDHEAAAALLASIPFESE 120
Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA----- 190
S + D + A + ++++ ++ + V+ +
Sbjct: 121 DRATSACLVAADWYVEADAYETAIEFLQSRLQTRPDDTRVRHRLVEILNQSGHRVAASRV 180
Query: 191 --AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
+ + + F D + AM L + EA E
Sbjct: 181 LRPMIRDGKASERELFSMITLGNAFVDESLPAPDFSNTTLAMLSLARRQRDQGELTEASE 240
Query: 249 VVSLIQERYPQG 260
+ ++++YP
Sbjct: 241 SLQKLRQKYPSS 252
>gi|265754716|ref|ZP_06089768.1| TPR domain-containing protein [Bacteroides sp. 3_1_33FAA]
gi|263234830|gb|EEZ20398.1| TPR domain-containing protein [Bacteroides sp. 3_1_33FAA]
Length = 602
Score = 38.6 bits (87), Expect = 0.89, Method: Composition-based stats.
Identities = 27/244 (11%), Positives = 66/244 (27%), Gaps = 11/244 (4%)
Query: 27 FFSIAVCFLVGWE-----RQSSRDVYLDSVTDVRYQRE------VYEKAVLFLKEQNFSK 75
+ LV S + + D + + +A+ ++ +
Sbjct: 11 LCVCLIGMLVSCGTVKRTSGVSGNKAVVEEKDPLTPEQRRKYDYFFLEALRMKEKGDLDA 70
Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
A+E ++ C +P + K ++A + + K YY
Sbjct: 71 AFEMYSHCLDIYPQGAATLFEISRFHMFLNQPEKGEEALKKAVDADPKSFWYKQTLAAYY 130
Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
+Y + I L+ + +++ YT + + + E
Sbjct: 131 QGKGNYPKAIYVYEDMASQFPSRLEPLMALIDLYTRTKDYQQVVNTLNRLEALDGKSEQI 190
Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
+ F + + + + L + Y+ +EA E + +
Sbjct: 191 SMEKFRMYLAMNNDQQAFTEIENLAKEYPYDMRYLTILGDVYLNNGKEEEAYETYQKVLK 250
Query: 256 RYPQ 259
P
Sbjct: 251 EEPG 254
>gi|159028862|emb|CAO90667.1| mom72 [Microcystis aeruginosa PCC 7806]
Length = 268
Score = 38.6 bits (87), Expect = 0.89, Method: Composition-based stats.
Identities = 24/194 (12%), Positives = 46/194 (23%), Gaps = 6/194 (3%)
Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
E Y + V L ++S A F Q + P A + + A
Sbjct: 42 AVEFYNRGVDRLTAGDYSGAIADFTQALQLEPK-DADAYYNRGYAELVLGQYERAIADYT 100
Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
I + + Y + + A I +
Sbjct: 101 QALTINPNYVNALGNRCYVHYLTKKYEAAVEDCTKAIALNGNFADFF-IYRGNAKDDLGR 159
Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA----EEAMAR 232
+ R + R + ++ L +Y+++ EA
Sbjct: 160 HLEAIEDYTKALSLQGTRGQDRIFYNRALAYNRAGQQEMALRDYNESLKINANFAEAYHN 219
Query: 233 LVEAYVALALMDEA 246
Y L ++A
Sbjct: 220 RGLTYYKLGNREKA 233
>gi|327540023|gb|EGF26619.1| ASPIC/UnbV domain-containing protein [Rhodopirellula baltica WH47]
Length = 1032
Score = 38.6 bits (87), Expect = 0.90, Method: Composition-based stats.
Identities = 25/252 (9%), Positives = 72/252 (28%), Gaps = 12/252 (4%)
Query: 17 YQLYKFALTIFFSIAVCF-LVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
+ Y+ ++ F IA+C +VG + S + + + +E + ++ +
Sbjct: 5 LKRYRQSINAIFLIALCVQVVGCTSEPSD---FEKLRKQQQLKEAARQTTELGLDEQIAL 61
Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
A + + + L+ Q + ++ ++ +
Sbjct: 62 AKKEL-ELGSVVRANEIIGPLLISDPDNQDVLRLKAEIQHRLGDHEAAAALLASIPFESE 120
Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA----- 190
S + D + A + ++ + ++ + V+ +
Sbjct: 121 DRATSACLVAADWYVEADAYETAIELLQSRLQTRPDDARVRHRLVEILNQSGHRVGASRV 180
Query: 191 --AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
+ + + F D + A+ L + EA E
Sbjct: 181 LRPMIRDGKASERELFSMITLGNAFVDESLPAPDFSNTTLALLSLARRQRDQGELTEASE 240
Query: 249 VVSLIQERYPQG 260
+ ++++YP
Sbjct: 241 SLQKLRQKYPSS 252
>gi|302038655|ref|YP_003798977.1| putative extracellular ligand-binding receptor [Candidatus
Nitrospira defluvii]
gi|300606719|emb|CBK43052.1| putative Extracellular ligand-binding receptor [Candidatus
Nitrospira defluvii]
Length = 664
Score = 38.6 bits (87), Expect = 0.90, Method: Composition-based stats.
Identities = 27/250 (10%), Positives = 72/250 (28%), Gaps = 18/250 (7%)
Query: 36 VGWERQSSRDVYLDSVTDVRYQ----REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91
+G + ++ + + + ++A + A + P
Sbjct: 30 LGEAAPAKKNPAPPRTEQSKPPTAAGQSILDQAKRLIDSDQPEAAAVTLRRFIESGPVPD 89
Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV--- 148
+ + L+ A + ++ + + + ++P S VD L+ ++A+
Sbjct: 90 LLDDAYLLMAAAMFGMKEHAETVRYVNQLLGEFPSSDLVDRAKLLLAKTHARAGNLDLAL 149
Query: 149 ---------PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
D + L+ + Y++ + ++ + +
Sbjct: 150 PLLSEVRSLSADPAIKRDALRLTGEF--QAQKKDYLRAIQAWLDEIPLDAGDQAHDTEGQ 207
Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
+ P V Y + + A +L+E + A + L R+P
Sbjct: 208 IRQLVNEQLDAPALVRVREAYPKSFPGDLASIKLIELHTAAGEDHLVERDLRLFLSRFPN 267
Query: 260 GYWARYVETL 269
+A L
Sbjct: 268 HPYATKAADL 277
>gi|262195711|ref|YP_003266920.1| hypothetical protein Hoch_2491 [Haliangium ochraceum DSM 14365]
gi|262079058|gb|ACY15027.1| Tetratricopeptide repeat protein [Haliangium ochraceum DSM 14365]
Length = 1155
Score = 38.6 bits (87), Expect = 0.90, Method: Composition-based stats.
Identities = 8/46 (17%), Positives = 15/46 (32%)
Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
+ +EA+ EAR+V + + YP +
Sbjct: 174 NYPRMDEALYYYAYTLQNAEYAKEARQVFHKLIKDYPNSKYIPDAY 219
>gi|317010057|gb|ADU80637.1| hypothetical protein HPIN_07240 [Helicobacter pylori India7]
Length = 220
Score = 38.6 bits (87), Expect = 0.91, Method: Composition-based stats.
Identities = 33/204 (16%), Positives = 68/204 (33%), Gaps = 6/204 (2%)
Query: 15 WAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFS 74
+ +K L I +I V G + + + Y+ + + N
Sbjct: 1 MRLKHFKTFLFITMAIIVIG-TGCANKKKKKDEYNKPAIFW-----YQGILREILFANLE 54
Query: 75 KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
A Y++ + + + +++L +Y A+ +EYI ++ NVDY+
Sbjct: 55 TADNYYSSLQSEHINSPLVPEAMLALGQAHMKKKEYVLASFYFDEYIKRFGTKDNVDYLT 114
Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
+L S+ ++ DQ + + +E+Y NS Y +
Sbjct: 115 FLKLQSHYYAFKNHSKDQEFISNAIVSLGEFIEKYPNSRYRPYVEYMQIKFILGQNELNR 174
Query: 195 EIGRYYLKRGEYVAAIPRFQLVLA 218
I Y KR + + +
Sbjct: 175 AIANVYKKRHKPEGVKRYLERIDE 198
>gi|239908968|ref|YP_002955710.1| putative N-acetylmuramoyl-L-alanine amidase [Desulfovibrio
magneticus RS-1]
gi|239798835|dbj|BAH77824.1| putative N-acetylmuramoyl-L-alanine amidase [Desulfovibrio
magneticus RS-1]
Length = 642
Score = 38.6 bits (87), Expect = 0.91, Method: Composition-based stats.
Identities = 15/85 (17%), Positives = 32/85 (37%), Gaps = 1/85 (1%)
Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY-VALALMDE 245
A E+ + + +Y AA + + ++ A++A+ R L E
Sbjct: 100 YYQAWTNAELAKRSVLDADYEAAASLYGRLAQSFPTHAWADDALLRRAVILAENLKRPLE 159
Query: 246 AREVVSLIQERYPQGYWARYVETLV 270
A+ + + +YP+G A +
Sbjct: 160 AKADLETLVRKYPKGDMAAQARKFL 184
>gi|326913950|ref|XP_003203294.1| PREDICTED: dnaJ homolog subfamily C member 3-like [Meleagris
gallopavo]
Length = 499
Score = 38.6 bits (87), Expect = 0.91, Method: Composition-based stats.
Identities = 22/239 (9%), Positives = 55/239 (23%), Gaps = 16/239 (6%)
Query: 34 FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93
L + +T + +Y +A+ +++++ A ++ +
Sbjct: 126 VLKSNPSNNEEKEAQTQLTKSDELQRLYSQALSAYQQEDYEAAIPLLDEILAVCVWDADL 185
Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA---QMIRDVPY 150
R+ + K + + E+ Y + +R+
Sbjct: 186 RELRAECYIKEGEPSKAISDLKAAAKLKSDNTEAFYKISRIYYQLGDHELSLSEVRECLK 245
Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
+ K ++ + + V + A
Sbjct: 246 LDQDHKQCFSLYKQVKKLNKQIESAEEFIREGRYEDAISKYDSVMKTEPDVPVYATRAKE 305
Query: 211 PRFQLVLANYSDA-------------EHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
+ N A+ EAY+ L +EA + Q
Sbjct: 306 RICHCLSKNQQATEAITVCTQVLQLEPTNVNALKDRAEAYLLEDLYEEAIKDYETAQAN 364
>gi|283779529|ref|YP_003370284.1| hypothetical protein Psta_1749 [Pirellula staleyi DSM 6068]
gi|283437982|gb|ADB16424.1| hypothetical protein Psta_1749 [Pirellula staleyi DSM 6068]
Length = 443
Score = 38.6 bits (87), Expect = 0.91, Method: Composition-based stats.
Identities = 35/164 (21%), Positives = 67/164 (40%), Gaps = 2/164 (1%)
Query: 75 KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
+A ++ D P +A + L +A +++GK+ +A + YP S++ +
Sbjct: 225 QALRVLDKIRIDDPTGRLADDATLAAANEHFASGKWTKADDWYTDLRQAYPTSEHQFLAH 284
Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT--VGRNQLAAK 192
YL + Y + + + +I ++ N + R + A K
Sbjct: 285 YLGLKAKLNSYMGPDYSANSLDEAEKLIKQIRRQFPNEAAKESDFLDRAAAEIRYKKAEK 344
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
+ YY KRGEY AA ++ + A++SD + + RL E
Sbjct: 345 VWNVASYYDKRGEYRAAAHHYRRIAADFSDTPFSSRSDQRLAEI 388
>gi|209523073|ref|ZP_03271630.1| sulfotransferase [Arthrospira maxima CS-328]
gi|209496660|gb|EDZ96958.1| sulfotransferase [Arthrospira maxima CS-328]
Length = 598
Score = 38.6 bits (87), Expect = 0.91, Method: Composition-based stats.
Identities = 20/212 (9%), Positives = 50/212 (23%), Gaps = 2/212 (0%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
+K+ ++S A E + + +L + K A +
Sbjct: 83 NLGNTLIKQGDWSAAIEVYQKAISLDTNFPWCYYNLGNAYSSIGEWEKSIDAYLTACQLD 142
Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
P+ + L + ++ + Y A
Sbjct: 143 DNLPDLDEKLGDALAGYCQGNLDNIIEHLTILPSFLDITIYQKLADNLARKYYWLAAIIL 202
Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
+ + + + + +A RL A +
Sbjct: 203 YQKVLAIEPKNPEILPKLNQAWERQRELEHQLNIHNQIVKQHPDSYDAYYRLGNALFKVG 262
Query: 242 LMDEA-REVVSLIQERYPQGYW-ARYVETLVK 271
+A + ++ + W + + TL+K
Sbjct: 263 KWHQAIEAYLRSMELKPNLPPWLYKDLWTLIK 294
>gi|167764185|ref|ZP_02436312.1| hypothetical protein BACSTE_02569 [Bacteroides stercoris ATCC
43183]
gi|167698301|gb|EDS14880.1| hypothetical protein BACSTE_02569 [Bacteroides stercoris ATCC
43183]
Length = 587
Score = 38.6 bits (87), Expect = 0.91, Method: Composition-based stats.
Identities = 27/252 (10%), Positives = 64/252 (25%), Gaps = 7/252 (2%)
Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLD-SVTDVRYQRE------VYEKAVLFLKEQNFS 74
+ +F +A LV + L + + +A ++++
Sbjct: 7 KKIGLFLLVAGFLLVSCGTSRKQAKALSAKPVAELTPEQQRKYDYFFLEAARLKIQKDYD 66
Query: 75 KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
A++ C P A A L + Q A E
Sbjct: 67 AAFDLLQHCLTINPNASSALYELAQYYLFLKQVPQGQAALEKAVENDPDNYWYSQGLANL 126
Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
Y + ++ + L + +++ Y + ++ E
Sbjct: 127 YQQQDEKEKAMKLLEDMSIRFTDKLDPLYALLDIYNRQEQYDKVIATLNRIEEKMGKSEQ 186
Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
+ + F + + ++ L + Y+ +EA + +
Sbjct: 187 LSMEKFRIYLQMKDNKNAFHEIESLVAEYPMDSRYQVVLGDVYMQNGKKEEAYNMYRKVL 246
Query: 255 ERYPQGYWARYV 266
+ P A Y
Sbjct: 247 DAEPDNAMAMYS 258
>gi|57106584|ref|XP_534923.1| PREDICTED: similar to FK506-binding protein 4 (Peptidyl-prolyl
cis-trans isomerase) (PPIase) (Rotamase) (p59 protein)
(HSP binding immunophilin) (HBI) (FKBP52 protein) (52
kDa FK506 binding protein) (FKBP59) [Canis familiaris]
Length = 459
Score = 38.6 bits (87), Expect = 0.91, Method: Composition-based stats.
Identities = 26/232 (11%), Positives = 68/232 (29%), Gaps = 14/232 (6%)
Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQN---------FSKAYEYFNQCSRDFPFAGV 92
+ +D + Y+ +++++ L + KA + + +
Sbjct: 164 PNEGAIVDVTLEGYYKDQMFDQRELRFEVGEGESLDLPCGLEKAIQRMEKGEHSIVYLKP 223
Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
+ + + + + + ES ++ L + + V + +
Sbjct: 224 SYAFGSVGKDKFQIPPNAELKYEIHLKSFEKAKESWEMNSEEKLEQSTIVKERGTVYFKE 283
Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
K L +I+ + F + A + + + A
Sbjct: 284 GKYKQALLQYKKIISWLEY-----ESSFSNEDAQKAQALRLASHLNLAMCHLKLQAFSAA 338
Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
+ + E+ + R EA++A+ D AR + + YP A+
Sbjct: 339 VESCNKALELDSNNEKGLFRRGEAHLAVNDFDLARADFQKVLQLYPSNKAAK 390
>gi|297170599|gb|ADI21625.1| hypothetical protein [uncultured myxobacterium HF0130_06F04]
Length = 1249
Score = 38.6 bits (87), Expect = 0.92, Method: Composition-based stats.
Identities = 23/211 (10%), Positives = 64/211 (30%), Gaps = 11/211 (5%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
+ D +Y A + + +A + F++ ++P + S Y +
Sbjct: 592 NPADENLPNFLYTTAQTYQGFDHLDEALKRFHRVLENYPTNEETAGFSVESLVDLYQTKR 651
Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
+ + + I P + + + V + + + V
Sbjct: 652 DYRTVAEFTKKIMDDPNFAANTDLLSSLQLYRTGAQFLVASELATADKHDEASALYVALV 711
Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
+P + + K + +A+ +Q ++ +Y + A+ +
Sbjct: 712 DENPTYANCDAALNNA-----------AVSFEKSQRFDSAMKMYQRIVDDYPQSPRADGS 760
Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQG 260
+ R+ ++A S + + YP+
Sbjct: 761 LFRVGVNAQNFFDFEKALATYSKLVKEYPKS 791
Score = 37.9 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 29/213 (13%), Positives = 68/213 (31%), Gaps = 18/213 (8%)
Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106
++ T + AV F K Q F A + + + D+P + A SL +
Sbjct: 711 VDENPTYANCDAALNNAAVSFEKSQRFDSAMKMYQRIVDDYPQSPRADGSLFRVGVNAQN 770
Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
+++A + + + +YP+S + +Y + + Q+ + K +
Sbjct: 771 FFDFEKALATYSKLVKEYPKSTSRPDAFYNIAFALEQL--------QQYKKAAKQYLAYC 822
Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
+ + F ++ + Y Y
Sbjct: 823 DVFPKRDDAPEVCFRAGEVYEKMDDPRLVRKTYLNFIKRYWQNEKHRDR----------V 872
Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
EA R+ ++Y + + R+ ++ + Y +
Sbjct: 873 VEAHLRVAKSYEKQGNLKQMRKRFQIVLDEYNK 905
>gi|218131863|ref|ZP_03460667.1| hypothetical protein BACEGG_03485 [Bacteroides eggerthii DSM 20697]
gi|317474523|ref|ZP_07933797.1| TPR domain-containing protein [Bacteroides eggerthii 1_2_48FAA]
gi|217986166|gb|EEC52505.1| hypothetical protein BACEGG_03485 [Bacteroides eggerthii DSM 20697]
gi|316909204|gb|EFV30884.1| TPR domain-containing protein [Bacteroides eggerthii 1_2_48FAA]
Length = 587
Score = 38.6 bits (87), Expect = 0.92, Method: Composition-based stats.
Identities = 32/256 (12%), Positives = 68/256 (26%), Gaps = 8/256 (3%)
Query: 19 LYKFALT-IFFSIAVCFLVGWERQSSRDVYLD-SVTDVRYQRE------VYEKAVLFLKE 70
++K T +F +A LV + L + + +A +
Sbjct: 3 IFKNKKTGLFLLVAGFLLVSCGTSRKQAKALSAKPVAELTPEQQRKYDYFFLEASRLKIQ 62
Query: 71 QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
+++ A++ C P A A L A + Q A E
Sbjct: 63 KDYDAAFDLLQHCLTINPNASSALYELAQYYLFLKQAPQGQAALEKAVENDPDNYWYSQG 122
Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
Y + +R + L + +++ Y + ++
Sbjct: 123 LANLYQQQDEKEKAVRLLEDMSVRFTDKLDPLYALLDIYNRQEQYDKVIATLNRIEGKMG 182
Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
E + + F + + ++ L + Y+ DEA +
Sbjct: 183 KSEQLSMEKFRIYLQMKDNKNAFHEIESLVAEYPMDTRYQVVLGDVYMQNGKKDEAYGIY 242
Query: 251 SLIQERYPQGYWARYV 266
+ + P A Y
Sbjct: 243 RKVLDAEPDNAMAMYS 258
>gi|219116100|ref|XP_002178845.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409612|gb|EEC49543.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 500
Score = 38.6 bits (87), Expect = 0.92, Method: Composition-based stats.
Identities = 22/205 (10%), Positives = 51/205 (24%), Gaps = 7/205 (3%)
Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
D+ T ++ A + +++ A +Y + P + V L +
Sbjct: 34 DTGTVGLSAGKLRSNAEEAMAVGDYTTAVQYLQEAITLEPESAVNHYKLYRIRHRKRHYL 93
Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ----YMSR 164
+ + S E + K + +G +
Sbjct: 94 EALRDISQAVELESSASYRKLKAKLLVTLGQCDRAVAELDLLAPNDQDNAQYETAKMCHE 153
Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY---S 221
++ + + ++ E+ + K + ++
Sbjct: 154 TIQLAEYHFLNQEYELAAEYFQQAMSFVEIASDLVWPKAKSLFETGDYYGVISDTGMLLK 213
Query: 222 DAEHAEEAMARLVEAYVALALMDEA 246
H EA AY L D+A
Sbjct: 214 QHPHHVEAYCLRGSAYHRLGEHDQA 238
>gi|192289725|ref|YP_001990330.1| tol-pal system protein YbgF [Rhodopseudomonas palustris TIE-1]
gi|192283474|gb|ACE99854.1| tol-pal system protein YbgF [Rhodopseudomonas palustris TIE-1]
Length = 345
Score = 38.6 bits (87), Expect = 0.92, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 32/84 (38%)
Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
A + +G + +R Y A F V + + + A +A+ RL +
Sbjct: 244 MRNFAQKYPDNPLTADAQYWLGESFFQRQMYRDAAEAFLAVTSKHEKSGKAPDALLRLGQ 303
Query: 236 AYVALALMDEAREVVSLIQERYPQ 259
+ AL + A + I +YPQ
Sbjct: 304 SLSALKEKEAACAALGEIGRKYPQ 327
>gi|42525704|ref|NP_970802.1| hypothetical protein TDE0186 [Treponema denticola ATCC 35405]
gi|41815715|gb|AAS10683.1| hypothetical protein TDE_0186 [Treponema denticola ATCC 35405]
Length = 441
Score = 38.6 bits (87), Expect = 0.92, Method: Composition-based stats.
Identities = 21/251 (8%), Positives = 60/251 (23%), Gaps = 14/251 (5%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDV---YLDSVTDVRYQREVYEKAVLFLKEQ---- 71
+ K + + + + +S ++ + + +++EKA +
Sbjct: 1 MKKIISVLSIAALLFAISSCGGKSEKNNAVLKVIKEAEGMTLDQLFEKAYQESNGKVLKG 60
Query: 72 -----NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126
A E F + + + ++ E+ +
Sbjct: 61 LGNSSRGKTAGETFVEAMKAKYPDYTGKIDWSQPKNNTIFDQLTNDNKNVNPEFSMTLIQ 120
Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
+ + + T + ++ +
Sbjct: 121 DGAQIKAKMIDTGILHNFVPKEWKESAGTDMKENGNPLALQTLSKVFMYNNVEASNKFLN 180
Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD-AEHAEEAMARLVEAYVALALMDE 245
KE + + E + L YS + A +A+ +AY ++D
Sbjct: 181 VWDFVKEGQSPLFMGLESEPIGKNFLLMLTHEKYSKVVKAAYDALPEADKAYFKP-IVDG 239
Query: 246 AREVVSLIQER 256
+ +
Sbjct: 240 LEKTAKELGLN 250
>gi|39934199|ref|NP_946475.1| hypothetical protein RPA1124 [Rhodopseudomonas palustris CGA009]
gi|39648047|emb|CAE26567.1| conserved hypothetical protein [Rhodopseudomonas palustris CGA009]
Length = 345
Score = 38.6 bits (87), Expect = 0.92, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 32/84 (38%)
Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
A + +G + +R Y A F V + + + A +A+ RL +
Sbjct: 244 MRNFAQKYPDNPLTADAQYWLGESFFQRQMYRDAAEAFLAVTSKHEKSGKAPDALLRLGQ 303
Query: 236 AYVALALMDEAREVVSLIQERYPQ 259
+ AL + A + I +YPQ
Sbjct: 304 SLSALKEKEAACAALGEIGRKYPQ 327
>gi|42525163|ref|NP_970543.1| O-linked GlcNAc transferase [Bdellovibrio bacteriovorus HD100]
gi|39577374|emb|CAE81197.1| probable O-linked GlcNAc transferase [Bdellovibrio bacteriovorus
HD100]
Length = 443
Score = 38.6 bits (87), Expect = 0.92, Method: Composition-based stats.
Identities = 14/152 (9%), Positives = 37/152 (24%), Gaps = 2/152 (1%)
Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
+ + + + + + + E+ +
Sbjct: 205 DFEAYNLMGNAHTLQRKTKDAMEAYKKSIELNAKYEPAYDGLISLYEKRDTPNLYELRIL 264
Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
+ +N + + + P Q +A L +Y AL
Sbjct: 265 LQDMVQNIGPRPQYLRKLCEINTRD-GTYEPAVQSCKEAIQKDPKIADAYVYLGLSYKAL 323
Query: 241 ALMDEAREVVSLIQERYPQGYWARYVE-TLVK 271
A + + +P+ A+Y L++
Sbjct: 324 GEDAIAVKTLKKAAGDFPKSELAQYHYGALLE 355
>gi|33594230|ref|NP_881874.1| putative periplasmic protein [Bordetella pertussis Tohama I]
gi|33598304|ref|NP_885947.1| putative periplasmic protein [Bordetella parapertussis 12822]
gi|33603214|ref|NP_890774.1| putative periplasmic protein [Bordetella bronchiseptica RB50]
gi|33564305|emb|CAE43606.1| putative periplasmic protein [Bordetella pertussis Tohama I]
gi|33566862|emb|CAE39077.1| putative periplasmic protein [Bordetella parapertussis]
gi|33568845|emb|CAE34603.1| putative periplasmic protein [Bordetella bronchiseptica RB50]
gi|332383644|gb|AEE68491.1| putative periplasmic protein [Bordetella pertussis CS]
Length = 229
Score = 38.6 bits (87), Expect = 0.92, Method: Composition-based stats.
Identities = 12/79 (15%), Positives = 30/79 (37%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ +G ++ AI + ++ N A +A+ + + + L A+ +
Sbjct: 148 QFYLGSSRYAMKDFKGAIEQLNNLVQNAPTNARAPDALLVIAGSQIELNNRAGAKATLQR 207
Query: 253 IQERYPQGYWARYVETLVK 271
I YP A ++ ++
Sbjct: 208 IVRDYPTTPAANTAKSRLQ 226
Score = 37.5 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 9/79 (11%), Positives = 27/79 (34%)
Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
+ ++ Y+ A+ ++ + A E +P + +A + +Y+ ++ A
Sbjct: 105 DQQEQAAYDGAIDLFRKGQYKDAAESLAAFIALYPNSQLAPTAQFYLGSSRYAMKDFKGA 164
Query: 114 ASLGEEYITQYPESKNVDY 132
+ P +
Sbjct: 165 IEQLNNLVQNAPTNARAPD 183
>gi|302038038|ref|YP_003798360.1| hypothetical protein NIDE2729 [Candidatus Nitrospira defluvii]
gi|300606102|emb|CBK42435.1| protein of unknown function [Candidatus Nitrospira defluvii]
Length = 489
Score = 38.6 bits (87), Expect = 0.93, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 22/60 (36%)
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
G Y AAI ++ L Y + A EA L +AY + + A + +
Sbjct: 34 WYQASTAFSDGRYSAAIHLYERYLTTYPKSRRALEAHWDLGQAYEQMGEVTAAIKEYRTL 93
>gi|254804658|ref|YP_003082879.1| HemY protein [Neisseria meningitidis alpha14]
gi|254668200|emb|CBA04941.1| HemY protein [Neisseria meningitidis alpha14]
gi|325203866|gb|ADY99319.1| conserved hypothetical protein [Neisseria meningitidis M01-240355]
Length = 405
Score = 38.6 bits (87), Expect = 0.93, Method: Composition-based stats.
Identities = 41/279 (14%), Positives = 81/279 (29%), Gaps = 11/279 (3%)
Query: 1 MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV 60
+ VLG+ + A+ L + + F++G + S R
Sbjct: 28 VYIVLGQTMLRINLHAFVLGSLIAVVVWYFLFKFIIGVFNIPEKMQRFGSARKGRKAALA 87
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
KA L E F KA ++ + +L++ A + E
Sbjct: 88 LNKAGLAYFEGRFEKAELEASRVLGNKEAGDNRTLALMLGAHAAGQMENIELRDRYLAEI 147
Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
+ + Y+ + + A M ++R+V + +G
Sbjct: 148 AKLPEKQQLSRYLLLAESALNRRDYEAAEANLHAAAKMNANLTRLVRLQLRYAFDRGDAL 207
Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEY--------VAAIPRFQLVLANYSDAEHAEEAMAR 232
V +L+ + + A + L D+ E
Sbjct: 208 QVLAKTEKLSKAGALGKSEMERYQNWAYRRQLADAADAAALKTCLKRIPDSLKNGELSVS 267
Query: 233 LVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+ E Y L L +A + +++ YPQ +E V+
Sbjct: 268 VAEKYERLGLYADAVKW---VKQHYPQSRRPELLEAFVE 303
>gi|226530716|ref|NP_001141458.1| hypothetical protein LOC100273568 [Zea mays]
gi|300797999|ref|NP_001178792.1| peptidyl-prolyl cis-trans isomerase FKBP4 [Rattus norvegicus]
gi|293347093|ref|XP_001066628.2| PREDICTED: FK506 binding protein 4 [Rattus norvegicus]
gi|261260096|sp|Q9QVC8|FKBP4_RAT RecName: Full=Peptidyl-prolyl cis-trans isomerase FKBP4;
Short=PPIase FKBP4; AltName: Full=52 kDa FK506-binding
protein; Short=52 kDa FKBP; Short=FKBP-52; AltName:
Full=59 kDa immunophilin; Short=p59; AltName:
Full=FK506-binding protein 4; Short=FKBP-4; AltName:
Full=FKBP59; AltName: Full=HSP-binding immunophilin;
Short=HBI; AltName: Full=Immunophilin FKBP52; AltName:
Full=Rotamase; Contains: RecName: Full=Peptidyl-prolyl
cis-trans isomerase FKBP4, N-terminally processed
gi|149049321|gb|EDM01775.1| FK506 binding protein 4 [Rattus norvegicus]
gi|194704654|gb|ACF86411.1| unknown [Zea mays]
Length = 458
Score = 38.6 bits (87), Expect = 0.93, Method: Composition-based stats.
Identities = 29/191 (15%), Positives = 61/191 (31%), Gaps = 5/191 (2%)
Query: 74 SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
+A + + + + + + + + + S ++
Sbjct: 205 EEAIQRMEKGEHSIVYLKPSYAFGSVGKERFQIPPHAELRYEVHLKSFEKAKASWEMNSE 264
Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
L + + V + + K L +IV + V +LA+
Sbjct: 265 EKLEQSNIVKERGTVYFKEGKYKQALLQYKKIV-SWLEYESSFSGEEMQKVHALRLASHL 323
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+ +LK + AAI L S+ E+ + R EA++A+ D AR +
Sbjct: 324 N-LAMCHLKLQAFSAAIESCNKALELDSN---NEKGLFRRGEAHLAVNDFDLARADFQKV 379
Query: 254 QERYPQGYWAR 264
+ YP A+
Sbjct: 380 LQLYPSNKAAK 390
>gi|126179086|ref|YP_001047051.1| transglutaminase domain-containing protein [Methanoculleus
marisnigri JR1]
gi|125861880|gb|ABN57069.1| transglutaminase domain protein [Methanoculleus marisnigri JR1]
Length = 507
Score = 38.6 bits (87), Expect = 0.93, Method: Composition-based stats.
Identities = 21/210 (10%), Positives = 45/210 (21%), Gaps = 12/210 (5%)
Query: 19 LYKFALTI---FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
+ A+TI F++ + F G + E Y + + N+
Sbjct: 1 MRSTAITISAAVFALLLIFAAGCTAATEEKA---GSAASSPADEAYARGLAEYGAANYRV 57
Query: 76 AYEYFNQ--CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
A E F + ++ + F + E + D
Sbjct: 58 AEERFAEACALYADAGDPDKARTARNAMFRANRTYMEYSLDTAAAEAALREKVPGITDAA 117
Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
+ AQ I + + + + R + A
Sbjct: 118 ITDWLENRAQKIVSENETLYFYDVA----GDYLYAHPGEMQKQNERSLDFDYVARYAWSG 173
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
+ R ++
Sbjct: 174 NRSEHGPYVNPVRYEGVERLEIPFEALPST 203
>gi|83648812|ref|YP_437247.1| TPR repeat-containing protein [Hahella chejuensis KCTC 2396]
gi|83636855|gb|ABC32822.1| protein containing tetratricopeptide repeat [Hahella chejuensis
KCTC 2396]
Length = 418
Score = 38.6 bits (87), Expect = 0.93, Method: Composition-based stats.
Identities = 28/253 (11%), Positives = 72/253 (28%), Gaps = 17/253 (6%)
Query: 5 LGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKA 64
+G A+ +F + I I + L ++ + + A
Sbjct: 159 IGAAVILFMMTLSKARLRFYPIALLILITPLA------------LTLYPPMQAAKYKQDA 206
Query: 65 VLFLKEQNFSKAYEYF---NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
L + N + A+ + ++ A + + + A +
Sbjct: 207 QWRLTQGNPASAFGAMVIAFKLDPLLTYSEQASRLFSQLNAMVFKPENPASALYQSAQLE 266
Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
T + +D ++ + +L + I Y + + + R
Sbjct: 267 TAGNRQEALDTLHSALQHRREDEFFPYVAHHTKRRLAILTDRVISRSYRHEQWDEALRAL 326
Query: 182 VTVGRNQLAAK--EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
+ R + Y+++G + + L + + +A E +
Sbjct: 327 QEMLRVYPESDTLRAMASLAYMRQGVPESCLSSVSASLERIQGSSLRADLLATQGECLMM 386
Query: 240 LALMDEAREVVSL 252
+ +D+AR+ L
Sbjct: 387 MGKVDQARQSFQL 399
>gi|325087689|gb|EGC40999.1| DnaJ domain-containing protein [Ajellomyces capsulatus H88]
Length = 744
Score = 38.6 bits (87), Expect = 0.94, Method: Composition-based stats.
Identities = 26/228 (11%), Positives = 59/228 (25%), Gaps = 19/228 (8%)
Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL---LMSAFVQYSAGKYQQAASLGEE 119
F K ++ KA + + + P + + +SA + + A + + A E
Sbjct: 250 AGNKFFKAGDYQKAIQEYTKAVEAQPSSSTYLSNRAAAYISAHLYHEALEDAKLADELEP 309
Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
+ Y + + A
Sbjct: 310 GNQKIMHRLARIYTSLGRPTEALSIYSQIQPPVTAKDKGPAETMLHHVTQAEGSLRDDRG 369
Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY------------SDAEHAE 227
+T+ A K + G ++ + ++ N D
Sbjct: 370 GSMTLYCLDQAVKGLGFGVTQPRKWRLMRVEAYLKMGNVNSLGDAQNIVMSMLRDNNQDP 429
Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQG----YWARYVETLVK 271
+A+ + A ++A + L P + R V+ L++
Sbjct: 430 DALLLRGRLFYAQGENEQAIKHFKLALSLDPDSAQAIRYLRMVQKLLR 477
>gi|315186031|gb|EFU19794.1| Tetratricopeptide TPR_1 repeat-containing protein [Spirochaeta
thermophila DSM 6578]
Length = 649
Score = 38.6 bits (87), Expect = 0.94, Method: Composition-based stats.
Identities = 25/226 (11%), Positives = 67/226 (29%)
Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
L + Y A++ ++E +A Y + P + +L ++A+
Sbjct: 421 KEALSTEKGSDDPVSAYNLALVLIEEDKAQEALSYAQKAVDLAPRVPEYQYTLGLAAYKL 480
Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
+ + A E Y + + + + + + + + + +
Sbjct: 481 GAYTVAETAFGKAIELKPDYVKPRVQLGLLHQDKGEDDKALSLLLEAYKLEPTSFEVNNN 540
Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
+ Y + + + L + ++
Sbjct: 541 LGNLYARKKLYSESIKHYRAAIEADPKDTLVRYNLALSYLDAKEYDEAVRVFQELLKIDP 600
Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
+A +L + + L + A++V+S + E+ P VE L+
Sbjct: 601 SYWDAYYQLGKLLITLEDSEGAKKVLSTLLEKKPDYSRRAEVEKLL 646
>gi|308388966|gb|ADO31286.1| hypothetical protein NMBB_0881 [Neisseria meningitidis alpha710]
gi|325129907|gb|EGC52708.1| hypothetical protein NMBOX9930304_1289 [Neisseria meningitidis
OX99.30304]
gi|325135997|gb|EGC58607.1| hypothetical protein NMBM0579_1331 [Neisseria meningitidis M0579]
Length = 405
Score = 38.6 bits (87), Expect = 0.94, Method: Composition-based stats.
Identities = 41/279 (14%), Positives = 81/279 (29%), Gaps = 11/279 (3%)
Query: 1 MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV 60
+ VLG+ + A+ L + + F++G + S R
Sbjct: 28 VYIVLGQTMLRINLHAFVLGSLIAVVVWYFLFKFIIGVFNIPEKMQRFGSARKGRKAALA 87
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
KA L E F KA ++ + +L++ A + E
Sbjct: 88 LNKAGLAYFEGRFEKAELEASRVLGNKEAGDNRTLALMLGAHAAGQMENIELRDRYLAEI 147
Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
+ + Y+ + + A M ++R+V + +G
Sbjct: 148 AKLPEKQQLSRYLLLAESALNRRDYEAAEANLHAAAKMNANLTRLVRLQLRYAFDRGDAL 207
Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEY--------VAAIPRFQLVLANYSDAEHAEEAMAR 232
V +L+ + + A + L D+ E
Sbjct: 208 QVLAKTEKLSKAGALGKSEMERYQNWAYRRQLADAADAAALKTCLKRIPDSLKNGELSVS 267
Query: 233 LVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+ E Y L L +A + +++ YPQ +E V+
Sbjct: 268 VAEKYERLGLYADAVKW---VKQHYPQSRRPELLEAFVE 303
>gi|209965093|ref|YP_002298008.1| hypothetical protein RC1_1798 [Rhodospirillum centenum SW]
gi|209958559|gb|ACI99195.1| conserved hypothetical protein [Rhodospirillum centenum SW]
Length = 318
Score = 38.6 bits (87), Expect = 0.94, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 33/82 (40%), Gaps = 2/82 (2%)
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
A ++ + ++G+Y A F LA + + A A L E E+
Sbjct: 193 AQEQYDYAFNLTRQGDYAGAERAFTQFLAQHPTHQLAPNAQYWLGETLYVRNKYKESARA 252
Query: 250 VSLIQERYPQGYWARYVETLVK 271
+ ++YP+ + ++L+K
Sbjct: 253 FAEGYKKYPKSN--KAPDSLLK 272
>gi|50119740|ref|YP_048907.1| hypothetical protein ECA0795 [Pectobacterium atrosepticum SCRI1043]
gi|49610266|emb|CAG73709.1| putative membrane protein [Pectobacterium atrosepticum SCRI1043]
Length = 283
Score = 38.6 bits (87), Expect = 0.94, Method: Composition-based stats.
Identities = 27/241 (11%), Positives = 57/241 (23%), Gaps = 9/241 (3%)
Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDS---VTDVRYQREVYEKAVLFLKEQNFS 74
+L + A + I L G ++ D + + + E A +
Sbjct: 7 KLKRGAPMLALLIVSTVLAGCSSSTAIKGSKDEGLRLARLLRDQGRVEAATEVYARLDSR 66
Query: 75 KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
A + A + + + + +
Sbjct: 67 DALKGAEMLEYASVAALARSPQQTLELYGRARQALGGDTNKMTPGEALAVCLGMGRTQLA 126
Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
Q L M +++ + A
Sbjct: 127 LGRNAMAQTDFACALKAQPNDAGALNGMGVVMDASGKHAEARQLFEKALQVNPADVAALN 186
Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
+ +L G AI + V + + + L AY++ DEAR ++ I
Sbjct: 187 NLALSWLASGNTDKAISLLRSVDESNATSRLN------LALAYLSGGRDDEARSALATIA 240
Query: 255 E 255
+
Sbjct: 241 Q 241
>gi|114319402|ref|YP_741085.1| hypothetical protein Mlg_0240 [Alkalilimnicola ehrlichii MLHE-1]
gi|114225796|gb|ABI55595.1| conserved hypothetical protein [Alkalilimnicola ehrlichii MLHE-1]
Length = 278
Score = 38.6 bits (87), Expect = 0.94, Method: Composition-based stats.
Identities = 16/96 (16%), Positives = 31/96 (32%), Gaps = 2/96 (2%)
Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
+ A + + G + A F+ +L ++ D E + A L E
Sbjct: 139 DETPTTPADTDARSEADRYQAAFQLITEGRFRRAGQAFEALLDDHPDGEFSANARYWLAE 198
Query: 236 AYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+ A D A E + +P + + +K
Sbjct: 199 TWYAEREFDRAGEEFERLLADHPDSN--KAADAKLK 232
>gi|328779761|ref|XP_394520.3| PREDICTED: intraflagellar transport protein 88 homolog isoform 1
[Apis mellifera]
Length = 797
Score = 38.6 bits (87), Expect = 0.95, Method: Composition-based stats.
Identities = 26/230 (11%), Positives = 56/230 (24%), Gaps = 15/230 (6%)
Query: 35 LVGWERQSSRDVYLDS------VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
L + TD + + +Y +++ K+ + +A E F +
Sbjct: 479 LSACAIKKGELNIARELLLCALDTDASHIQALYNLGLVYKKQNMYEEALECFWKVRNIVR 538
Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
+ + I Q
Sbjct: 539 HDPQT-VYQIGQLYQLMDDIDQATDWYNQLLGIIPCDPGVLQKIGEMYDAAGDKQQAYQF 597
Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI----GRYYLKRG 204
D + + Y S + +LA E + G
Sbjct: 598 YSDSYRFFPANFEVIDWLGSYFVSMQIAEKALVYFKKAVELAPDEPRWRLLVAACLRRIG 657
Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
++ A+ +Q + + + E + LV L L EA+ + ++
Sbjct: 658 QFHKAVLEYQDIHNKFPENI---ECLKFLVRLCSDLGLK-EAQLYATELK 703
>gi|294669631|ref|ZP_06734698.1| hypothetical protein NEIELOOT_01532 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291308544|gb|EFE49787.1| hypothetical protein NEIELOOT_01532 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 225
Score = 38.6 bits (87), Expect = 0.95, Method: Composition-based stats.
Identities = 10/65 (15%), Positives = 25/65 (38%)
Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
+ + + G + I ++ + ++ A +AM + + + D AR+ + Y
Sbjct: 150 QSHQRLGNCESVINIGNRYISRFRNSPEAADAMFSIGQCQWNMQQRDVARDTWRKLMLIY 209
Query: 258 PQGYW 262
P
Sbjct: 210 PDSAA 214
>gi|27382259|ref|NP_773788.1| hypothetical protein bll7148 [Bradyrhizobium japonicum USDA 110]
gi|27355430|dbj|BAC52413.1| bll7148 [Bradyrhizobium japonicum USDA 110]
Length = 398
Score = 38.6 bits (87), Expect = 0.95, Method: Composition-based stats.
Identities = 17/83 (20%), Positives = 30/83 (36%)
Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
L + +G Y +R +Y + F V Y + A +A+ RL +
Sbjct: 297 MKNFAQKYPSDPLLGDAQYWLGESYFQRQQYRDSAEAFLAVTTKYEKSAKAPDALLRLGQ 356
Query: 236 AYVALALMDEAREVVSLIQERYP 258
+ AL + A + +YP
Sbjct: 357 SLAALKEKEAACAAFGEVGRKYP 379
>gi|109899433|ref|YP_662688.1| type IV pilus biogenesis/stability protein PilW [Pseudoalteromonas
atlantica T6c]
gi|109701714|gb|ABG41634.1| type IV pilus biogenesis/stability protein PilW [Pseudoalteromonas
atlantica T6c]
Length = 332
Score = 38.6 bits (87), Expect = 0.96, Method: Composition-based stats.
Identities = 18/244 (7%), Positives = 58/244 (23%), Gaps = 3/244 (1%)
Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
+ I + L + D + + + +L+ NFS+A
Sbjct: 1 MIPMNFFRAMSVIFILALSACAS-QNAGTGSDDFDKQKAAKTRLSLGLTYLENGNFSQAK 59
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY--ITQYPESKNVDYVYY 135
++ P + G + + ++
Sbjct: 60 FNLDKALSFAPEMADVHYGMAYYFQNVEEYGSASTSYKKAMALAPKNADIANSYGAFLCA 119
Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
A++ + + + + + A ++ N +
Sbjct: 120 QGDYEQAKVYFFKALNSDIYNSSAETYENLALCSQSQNALDDAIGFLEDALNHQPGRAKS 179
Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
+ + + + A + +++ V+ + A + +++
Sbjct: 180 LFLLAQMQLQANRFAAARDSLRRYEKVASVSADSLWLAVKIEQGAGSPNRASDYANMLLS 239
Query: 256 RYPQ 259
YP
Sbjct: 240 LYPD 243
>gi|113477349|ref|YP_723410.1| hypothetical protein Tery_3903 [Trichodesmium erythraeum IMS101]
gi|110168397|gb|ABG52937.1| Tetratricopeptide TPR_2 [Trichodesmium erythraeum IMS101]
Length = 809
Score = 38.6 bits (87), Expect = 0.96, Method: Composition-based stats.
Identities = 26/261 (9%), Positives = 59/261 (22%), Gaps = 28/261 (10%)
Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQR----------------EVY 61
+ L + SI +V + ++S + + ++
Sbjct: 1 MIIWKNLRLVISIVCLLIVPPSMIVDKKANINSQALTKPTKNESYYISQNNLKTEIQKLE 60
Query: 62 EKAVLFLKEQNFSKAYEYFNQ-CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
++A F A E F Q + + + + +L
Sbjct: 61 QQATEEFNNGKFEVALEQFKQVLEIYTQQSDRFGIIQTLDKIAVVYDAQGKYLKALEFYQ 120
Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY-MSRIVERYTNSPYVKGAR 179
T + +S ++ Q +++ G
Sbjct: 121 KTLEKTQQEKSSEDISAILSKIGLVYSQLGQYEKAIDFYQQSLNKNYPEQAIILNKIGTI 180
Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
+Y ++ K + + Y + E EA+
Sbjct: 181 YYHLKQFSKALEYYQRALEVNRKNKDNTGIAKTLDNIGVTYREQEKYSEALKY------- 233
Query: 240 LALMDEAREVVSLIQERYPQG 260
EA + I + Y
Sbjct: 234 ---HQEALAIKEKIGDNYNNS 251
>gi|304414046|ref|ZP_07395414.1| tetratricopeptide repeat-containing putative fimbrial biogenesis
protein [Candidatus Regiella insecticola LSR1]
gi|304283260|gb|EFL91656.1| tetratricopeptide repeat-containing putative fimbrial biogenesis
protein [Candidatus Regiella insecticola LSR1]
Length = 247
Score = 38.6 bits (87), Expect = 0.97, Method: Composition-based stats.
Identities = 26/251 (10%), Positives = 66/251 (26%), Gaps = 18/251 (7%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
L + + L G V + + V + + ++ +L + + A +
Sbjct: 1 MKLLLLVMYLTTSILTGCS------VAPEITSQVTAGQARLQLSLEYLARGDLNDARQNI 54
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
+ R P A ++ + + N +
Sbjct: 55 IKVLRAHPQNYRAHLAMALYEQRIGENNA-----AQLRYQQAMKLAPNNGIILNNYGAFL 109
Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV------KGARFYVTVGRNQLAAKEV 194
+ Q T ++L +++ N+ Y + + +
Sbjct: 110 CSLGQYMSAQQQFNTAVLLPDYGQVINSIENAGYCFLQADQNDKARIMLSRALKYDPDKS 169
Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDA-EHAEEAMARLVEAYVALALMDEAREVVSLI 253
+ +R + + QL+L Y D ++ + D + +
Sbjct: 170 AVLLTEAERQFRLKNYVKAQLLLNIYQDILPKNARSLWLQIRFAALAGSQDSVQRYGQQL 229
Query: 254 QERYPQGYWAR 264
+ +PQ R
Sbjct: 230 AQNFPQSEQYR 240
>gi|166365876|ref|YP_001658149.1| lytic transglycosylase catalytic precursor [Microcystis aeruginosa
NIES-843]
gi|166088249|dbj|BAG02957.1| lytic transglycosylase catalytic precursor [Microcystis aeruginosa
NIES-843]
Length = 722
Score = 38.6 bits (87), Expect = 0.97, Method: Composition-based stats.
Identities = 32/232 (13%), Positives = 76/232 (32%), Gaps = 3/232 (1%)
Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
+RD + + + + + + KAY+ + + + A + L ++
Sbjct: 216 NQARDRLVKDYAEQLTPADWAMIGAGYWQSGLYEKAYKAYAKATPSPEQAYRYARGLQIA 275
Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
+ + YQ+ + + + + A + R V L+
Sbjct: 276 KKLPEARSAYQKLIKTYPQASETGLGLLRLAQI-SPNRDAIAYLDRIVKQFPDRAPEALE 334
Query: 161 YMSRIVERYTNS--PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
++++ ++ A + + K G+Y A Q +
Sbjct: 335 AKAKLLNSTNAQAASQTWQTLLNKYPKSDEAADYRWLMAQRAAKSGDYAKAWQWAQPIAV 394
Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
N SD++ A +A + + L EA++ + R+P Y+A L+
Sbjct: 395 NNSDSQTAPKAAFWVGKWAQKLGKNQEAKQAFTYTISRHPHSYYAWRSAVLL 446
>gi|77919141|ref|YP_356956.1| TPR repeat-containing protein [Pelobacter carbinolicus DSM 2380]
gi|77545224|gb|ABA88786.1| TPR-repeat-containing hypothetical protein [Pelobacter carbinolicus
DSM 2380]
Length = 769
Score = 38.6 bits (87), Expect = 0.98, Method: Composition-based stats.
Identities = 22/215 (10%), Positives = 57/215 (26%), Gaps = 7/215 (3%)
Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
R +Y F N A P + + + +
Sbjct: 558 RSLYGLGQYFFNAGNSVVAENLILAALDSDPSSREFQSGYVEQLVNTQKQTEALSLIRGF 617
Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
+ ++ G+ + +P R+ Y+ + + +
Sbjct: 618 --IESSPEDTLFWVQQVINYGIDGSHRSEILPDLSRSHHDYGLYLMQHGDINKADGAFRK 675
Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
A + + + + ++ + Y A+ + + Y + Y
Sbjct: 676 ALALARQEQYPDKSIFLPMAHFFERYQGYDDALDTLMVASSKYPQDL---NFLLAKGRIY 732
Query: 238 VALALMDEAREVVS-LIQERYPQGYWARYVETLVK 271
+ + +AR+V ++ P AR L++
Sbjct: 733 QEMGITFKARKVYQDVLILN-PTNQEARQRLNLLE 766
>gi|255012223|ref|ZP_05284349.1| hypothetical protein Bfra3_23987 [Bacteroides fragilis 3_1_12]
Length = 504
Score = 38.6 bits (87), Expect = 0.99, Method: Composition-based stats.
Identities = 27/266 (10%), Positives = 57/266 (21%), Gaps = 20/266 (7%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQ----------SSRDVYLDSVTDVRYQREVYEKAVLFL 68
+ K +I + L S D + + + +Y+
Sbjct: 6 MKKIYKSITLVATILSLSSCGNDWLDRKPADGIPSEDAITNYNDALTARTGMYDGIQGNS 65
Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
++ A ++ R + S + + +
Sbjct: 66 NSTSYYGARMFYYGDVRAEDMQARTQGMRSSSCYEMRYTVDDAPNMWNIPYNVVRRANRL 125
Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
V + I + + + L + + R PY + V
Sbjct: 126 IQAINEKKVTDATEAQIGKIYSEALVVR-ALVHFDLV--RIYGMPYTADNGASLGVPVIL 182
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQL-------VLANYSDAEHAEEAMARLVEAYVALA 241
+ ++ Y I + A A L Y+
Sbjct: 183 KPLERNDLPSRNTVAEVYTQVIRDLTDAINSGYLAKDKTQGYINEWAAKALLTRVYLTKG 242
Query: 242 LMDEAREVVSLIQERYPQGYWARYVE 267
+ A +V I P W
Sbjct: 243 DNENALKVAEDIITNSPYKLWTNEEY 268
>gi|29348871|ref|NP_812374.1| TPR domain-containing protein [Bacteroides thetaiotaomicron
VPI-5482]
gi|29340777|gb|AAO78568.1| TPR domain protein [Bacteroides thetaiotaomicron VPI-5482]
Length = 584
Score = 38.6 bits (87), Expect = 0.99, Method: Composition-based stats.
Identities = 30/255 (11%), Positives = 67/255 (26%), Gaps = 8/255 (3%)
Query: 20 YKFALTIFFSIAVCFLVGW----ERQSSRDVYLDSVTDVRYQREVYE----KAVLFLKEQ 71
+I+ +AV LV + V L + Q+ Y+ +A+ +++
Sbjct: 1 MNKKNSIWLLVAVWTLVSCGTVKSTREKPAVALAQSSLTSEQQRKYDYFFLEAMRLKEKK 60
Query: 72 NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
+++ A+ C P A A + + Q+A
Sbjct: 61 DYASAFGLLQHCLDIHPNAASALYEVSQYYMFLRQVPQGQEALEKAVANAPDNYWYSQGL 120
Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
Y + I + + +++ Y + +
Sbjct: 121 ASLYQQQNELDKAITLLEQMVVRFPAKQDPLFNLLDLYGRQEKYDKVISTLNRLEKHMGK 180
Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
E + + FQ + + + L + Y+ EA +V
Sbjct: 181 NEQLSMEKFRIYLQMKDDKKAFQEIESLVQEYPMDMRYQVILGDVYLQNGKKQEAYDVYQ 240
Query: 252 LIQERYPQGYWARYV 266
+ P A +
Sbjct: 241 KVLAAEPDNPMAIFS 255
>gi|67541318|ref|XP_664433.1| hypothetical protein AN6829.2 [Aspergillus nidulans FGSC A4]
gi|40739038|gb|EAA58228.1| hypothetical protein AN6829.2 [Aspergillus nidulans FGSC A4]
gi|259480425|tpe|CBF71545.1| TPA: TPR domain protein (AFU_orthologue; AFUA_5G12710) [Aspergillus
nidulans FGSC A4]
Length = 710
Score = 38.6 bits (87), Expect = 0.99, Method: Composition-based stats.
Identities = 11/99 (11%), Positives = 28/99 (28%)
Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
+ L + + + +D +
Sbjct: 214 WFEKESYHLAIDCYSRALESSPSAEEAITIRLNRALSSLKAHEFEAALRDLDLQPTDPKS 273
Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
E+A+ R +A L E+ E ++ +++P+ A+
Sbjct: 274 LEKALFRKAQALYHLGRFRESCETHEILAKQFPENTIAK 312
>gi|307718883|ref|YP_003874415.1| hypothetical protein STHERM_c12010 [Spirochaeta thermophila DSM
6192]
gi|306532608|gb|ADN02142.1| hypothetical protein STHERM_c12010 [Spirochaeta thermophila DSM
6192]
Length = 305
Score = 38.6 bits (87), Expect = 0.99, Method: Composition-based stats.
Identities = 26/232 (11%), Positives = 61/232 (26%), Gaps = 13/232 (5%)
Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-------FAGVARKSLLMSAFVQY 105
+V + YE LF +E F+ A + + F +A + +
Sbjct: 62 EVTFPEAEYELGRLFFREGEFTLAERHLLKALAQRQYLAVEASFYPIAYTLAELYLAERK 121
Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
+ + Y +N + + + R + +
Sbjct: 122 YHEFEETLFTYILSEDESYIGERNRKNREVWTTTLKEKGLDRLLVLYRCPENASYRAHLL 181
Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF------QLVLAN 219
+ + + + +++ + + +
Sbjct: 182 LSEFYGENGRMDKALEHATIGVMMVVTTLVDTIREEDYLYIFSSMEALWREIQREDLFLS 241
Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
Y + + L A LA +EA + S + R P+G W + +K
Sbjct: 242 YLEDREVYRLLYWLANALYGLAHREEAVKWWSFVAARAPEGRWKYLAFSQLK 293
>gi|303238806|ref|ZP_07325338.1| copper amine oxidase domain protein [Acetivibrio cellulolyticus
CD2]
gi|302593685|gb|EFL63401.1| copper amine oxidase domain protein [Acetivibrio cellulolyticus
CD2]
Length = 489
Score = 38.6 bits (87), Expect = 0.99, Method: Composition-based stats.
Identities = 24/243 (9%), Positives = 52/243 (21%), Gaps = 39/243 (16%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
K + TI + + + T E +A + E+NF A EY
Sbjct: 11 KLSTTILAVLCIIMSIFCSGL----TVYADDTKSNEASEYITEAYAAINEKNFDLALEYC 66
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
N+ + + + +
Sbjct: 67 NKAIGVVSQPIFYSLKSQILIYQEKYDEALNTLDQAIALFPQYT---------------- 110
Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
+ I + + ++
Sbjct: 111 ----------------NAYSEKASIYSQLEKYDEAVKCYKLGIKDNPKDLTLYTQLSYIL 154
Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
+ G+ + + ++ + EEA+ L Y + DEA + P+
Sbjct: 155 FETGDNTEILECLEKLIEQ---DPYHEEALYNLACTYSLINKPDEALSCLKKAIVLSPKN 211
Query: 261 YWA 263
Sbjct: 212 KIY 214
>gi|269103277|ref|ZP_06155974.1| hypothetical fimbrial biogenesis and twitching motility protein
[Photobacterium damselae subsp. damselae CIP 102761]
gi|268163175|gb|EEZ41671.1| hypothetical fimbrial biogenesis and twitching motility protein
[Photobacterium damselae subsp. damselae CIP 102761]
Length = 251
Score = 38.6 bits (87), Expect = 0.99, Method: Composition-based stats.
Identities = 14/240 (5%), Positives = 52/240 (21%), Gaps = 8/240 (3%)
Query: 30 IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS----- 84
+ L+G + + +L+ + +A E +
Sbjct: 9 LLCGLLMGCVTVNENGGTTQEFNSTEAAEARITLGLGYLQAGQWQRAKENLDLALKYAPK 68
Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
+A + + A + + + A
Sbjct: 69 YYRAQNAMAFYYQKVDENAKAEAMYKKALQDSPKNGDVLNNYGVFLCSEARYDEAINAFE 128
Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204
T + + + + +++ + +
Sbjct: 129 QAIKQPYYYLTSASYENAGLCSVKKGDLKQARFFFEKSLTHDPNRPKSMLQLAQLDIDAH 188
Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
A + Y + +++ L++ + + L+++ +P +
Sbjct: 189 HLSDARVQLFKFNKRY---GYQPDSLWLLIQLERKAGKTTQVAKYAGLLKKEFPDSQQYQ 245
>gi|225851488|ref|YP_002731722.1| tetratricopeptide repeat domain protein [Persephonella marina
EX-H1]
gi|225645952|gb|ACO04138.1| tetratricopeptide repeat domain protein [Persephonella marina
EX-H1]
Length = 934
Score = 38.6 bits (87), Expect = 0.99, Method: Composition-based stats.
Identities = 29/212 (13%), Positives = 61/212 (28%), Gaps = 4/212 (1%)
Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM---SAFVQYSAGKYQQAAS 115
+ +EKAV F + K + + +YS
Sbjct: 427 DYFEKAVDFSVSDDLKKKALIYLTYIYLKLNKDQKFLESVRKLKDLDPEYSKNMLGWFFF 486
Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
Y Y + + + + ++ I R +
Sbjct: 487 KKRNYQKAYEAFTDEYMKAVSAFNAGDLDKAYSLVKGKKDRKSRFLLAYIFMRKGDIDKA 546
Query: 176 KGARFYVTVGRNQLAAKEVE-IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234
+ ++ G +++A + Y G+Y+ AI F+ Y E A+ R+
Sbjct: 547 RDILRELSKGDDKIAQQAGYLYAYSYFSEGKYIEAIKAFRDYAEKYRGTELGNLAVLRMA 606
Query: 235 EAYVALALMDEAREVVSLIQERYPQGYWARYV 266
++Y ++AR++ E + A
Sbjct: 607 DSYYNAGQKEKARKIYQQFIEEHANTPEAIDA 638
Score = 37.5 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 32/224 (14%), Positives = 79/224 (35%), Gaps = 25/224 (11%)
Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106
L D Q+ Y A + E + +A + F + + + ++L A Y+
Sbjct: 552 ELSKGDDKIAQQAGYLYAYSYFSEGKYIEAIKAFRDYAEKYRGTELGNLAVLRMADSYYN 611
Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
AG+ ++A + +++I ++ + Y + + + Q + + +
Sbjct: 612 AGQKEKARKIYQQFIEEHANTPEAIDAAYQLTVLEMEESGADVASQ---------IEKFI 662
Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
E+Y P+V + + + + Y D + +
Sbjct: 663 EKYPQYPFVSLLKLQLGDLYTEKQEYDKAEKIYRELIEA----------------DIKES 706
Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
E A+ +L D+A ++++ + YP+G + + L+
Sbjct: 707 EYALYKLGYLKYISGDKDQAVKILTRYIKIYPRGEFNVQAKELL 750
>gi|253698929|ref|YP_003020118.1| hypothetical protein GM21_0276 [Geobacter sp. M21]
gi|251773779|gb|ACT16360.1| Tetratricopeptide TPR_2 repeat protein [Geobacter sp. M21]
Length = 624
Score = 38.6 bits (87), Expect = 0.99, Method: Composition-based stats.
Identities = 28/207 (13%), Positives = 57/207 (27%), Gaps = 11/207 (5%)
Query: 61 YEKAVLFLKE-----QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
Y A L E + + A + + ++ L A S
Sbjct: 372 YGDARRRLAEIHSVRGDLNAAIAQYRELVSRHGDNPLSYYKLARLYEQGRQYADAIAAYS 431
Query: 116 LGEEYITQY---PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
E + Y+ + + +V + + + +
Sbjct: 432 KAIELDQDSEVAHQGIARLYLKRKQAEEAEKHLLEVLRLDPKHAEARELLISLYVKARRY 491
Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232
+ A + +G Y RG A ++Q L D A+
Sbjct: 492 DDTEKLLKASAELNPDSANDQYRLGVIYAFRGNNDGAREQYQKALELKPD---HARALNA 548
Query: 233 LVEAYVALALMDEAREVVSLIQERYPQ 259
L + Y+ L ++ARE ++ ++ P
Sbjct: 549 LGKLYLRLGQKEKAREALAAARKADPD 575
Score = 37.1 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 27/203 (13%), Positives = 57/203 (28%), Gaps = 6/203 (2%)
Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFP-FAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
+Y L+ ++ + +A F++ R P + R+ + + Q L
Sbjct: 342 LYNLGTLYERKGDLDQAMRRFSEAIRLDPEYGDARRRLAEIHSVRGDLNAAIAQYRELVS 401
Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL--MLQYMSRIVERYTNSPYVK 176
+ + +Y + + Q ++R+ + + +
Sbjct: 402 RHGDNPLSYYKLARLYEQGRQYADAIAAYSKAIELDQDSEVAHQGIARLYLKRKQAEEAE 461
Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
V + A + Y+K Y + D+ + + RL
Sbjct: 462 KHLLEVLRLDPKHAEARELLISLYVKARRYDDTEKLLKASAELNPDSANDQ---YRLGVI 518
Query: 237 YVALALMDEAREVVSLIQERYPQ 259
Y D ARE E P
Sbjct: 519 YAFRGNNDGAREQYQKALELKPD 541
>gi|154174683|ref|YP_001408802.1| TPR repeat-containing protein [Campylobacter curvus 525.92]
gi|112803721|gb|EAU01065.1| TPR repeat-containing protein [Campylobacter curvus 525.92]
Length = 286
Score = 38.6 bits (87), Expect = 0.99, Method: Composition-based stats.
Identities = 14/101 (13%), Positives = 32/101 (31%)
Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
+ + Y+ + AA +G K+ Y AI +Q + A++
Sbjct: 182 LLNSGKTSEAAEYFEYLNKKGYKPAASNFYLGEIAYKQKSYSTAIQYYQKSIQGSDKADY 241
Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
+ + ++ + A ++ YP A+
Sbjct: 242 TSKLLYHTAISFDKIGDTQSANRFYKALKVGYPDSKEAQAA 282
>gi|32491159|ref|NP_871413.1| hypothetical protein WGLp410 [Wigglesworthia glossinidia
endosymbiont of Glossina brevipalpis]
gi|25166366|dbj|BAC24556.1| ybgF [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 251
Score = 38.6 bits (87), Expect = 0.99, Method: Composition-based stats.
Identities = 16/199 (8%), Positives = 50/199 (25%), Gaps = 2/199 (1%)
Query: 73 FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132
F A + + + Q + + I +
Sbjct: 14 FLIAVASLKTATAKIQVKKAIPAIEDRITKINRLFKSHSQLLNQIQNKIHENQNDLENIR 73
Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
+ + + + ++ + + +
Sbjct: 74 SQVQFNQHELHKLIKNQNEFQDKLKIFINNYEKLKLSYVKNNNNFKKNSSINENYEDKLE 133
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ + L + AI +F+ + Y + + A L + Y D++ +
Sbjct: 134 YNKHIKLVLGNKNHDKAIEKFKNFIKKYPKSIYTPNAKYWLGQLYYIKGKSDDSIYYFAS 193
Query: 253 IQERYPQGYWARYVETLVK 271
+ + +P + + + L+K
Sbjct: 194 MIKEFPN--FQKTPDALLK 210
>gi|291279654|ref|YP_003496489.1| hypothetical protein DEFDS_1266 [Deferribacter desulfuricans SSM1]
gi|290754356|dbj|BAI80733.1| hypothetical protein [Deferribacter desulfuricans SSM1]
Length = 900
Score = 38.6 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 19/208 (9%), Positives = 63/208 (30%)
Query: 48 LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSA 107
+ +A + K + + + + ++
Sbjct: 690 KKYPNSKYQSEALLLRANFYEKNKLYQNCVIDADTAYKKSKNNEALFVKAKCLKYIDNKK 749
Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
L + +Y K + + + D L+ +++
Sbjct: 750 AYEIFKMLLEKSSGYEYVSRKEIIDLSNDAEEVLTNSLFFKDKDINLYYHGLERYLNLLK 809
Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
Y + ++ + A G Y + +Y+ A+ F V + D+++ +
Sbjct: 810 TIGEDSYQYIMELLESGDKDFVPAGLYFKGVYLFNKKDYIYALKHFLKVYYLFKDSKYVK 869
Query: 228 EAMARLVEAYVALALMDEAREVVSLIQE 255
+++ + Y+ + D+A ++ ++++
Sbjct: 870 KSLEYAKDCYLKMGKKDKAEKIEKILKK 897
>gi|254779817|ref|YP_003057923.1| putative paralysed flagella protein PflA; putative signal peptide
[Helicobacter pylori B38]
gi|254001729|emb|CAX29960.1| Putative paralysed flagella protein PflA; putative signal peptide
[Helicobacter pylori B38]
Length = 801
Score = 38.6 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 27/205 (13%), Positives = 55/205 (26%), Gaps = 17/205 (8%)
Query: 70 EQNFSKAYEYFNQ----CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP 125
++++ KA F + L + + I Q
Sbjct: 121 DRDYKKAIPLFVENDPKAKTWQIIGYDQNIPFLSGKDNAQKGLNFPIVIKDAQTPIIQEL 180
Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
+ N + A + D +A L+ +SR + Y + + K +
Sbjct: 181 DVNNKPLLTTKGYDLNAYLEAKKQMDSQAYFDALRTISRTFKNYPQTMFKKDLYLLEIIA 240
Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
QL K+ + K + NY + E + + +A +
Sbjct: 241 LGQLGIKKSLLIDIGTK-------------WIKNYPTDPNIPEVLYYVAKALDENNNYKQ 287
Query: 246 AREVVSLIQERYPQGYWARYVETLV 270
A I Y +A + +
Sbjct: 288 AMRYYKRILLEYKNSRYAPLAQMRL 312
>gi|221042896|dbj|BAH13125.1| unnamed protein product [Homo sapiens]
Length = 591
Score = 38.6 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 16/226 (7%), Positives = 47/226 (20%), Gaps = 10/226 (4%)
Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
++ +Y L+ ++ ++ +A + + + P +
Sbjct: 342 CSEIPDENLKGPHAHKSSVTSCLYNLGKLYHEQGHYEEALSVYKEAIQKMPRQFAPQSLY 401
Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL------VGMSYAQMIRDVPYD 151
M K +A E + + Y ++
Sbjct: 402 NMMGEAYMRLSKLPEAEHWYMESLRSKTDHIPAHLTYGKLLALTGRKSEAEKLFLKAIEL 461
Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
+ + + + + AA
Sbjct: 462 DPTKGNCYMHYGQFLLEEARLIEAAEMAKKAAELDSTEFDVVFNAAHMLRQASLNEAAEK 521
Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR-EVVSLIQER 256
+ L + A+ L + +A + +Q +
Sbjct: 522 YYDLAARLRPNYPA---ALMNLGAILHLNGRLQKAEANYLRALQLK 564
>gi|224534083|ref|ZP_03674666.1| hypothetical protein BBUCA112A_0219 [Borrelia burgdorferi CA-11.2a]
gi|224512782|gb|EEF83150.1| hypothetical protein BBUCA112A_0219 [Borrelia burgdorferi CA-11.2a]
Length = 1065
Score = 38.6 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 23/219 (10%), Positives = 61/219 (27%)
Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
+ + Y + Q + Y+ ++ K + + + E F+Q + P A + ++
Sbjct: 706 KAENAYEKIIKLTNTQEDHYKLGIIRFKLKKYEHSIESFDQTIKLDPKHKKALHNKGIAL 765
Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
+ K ++ + Y + + Q K
Sbjct: 766 MMLNKNKKAIESFEKAIQIDKNYSTAYYQKGIAEEKNGDMQQAFESFKNAYNLDKKPNYA 825
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
+ + + + ++ N E+ I + + E + +
Sbjct: 826 LKAGIVSNNLGNFKQSEKYLNFFNANAKKPNEIAIYNLSIAKFENNKLEESLETINKAID 885
Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
E + + A + SL+ E+ P+
Sbjct: 886 LNPEKSEYLYLKASINLKKGNYQNAISLYSLVIEKNPEN 924
>gi|115377579|ref|ZP_01464777.1| TPR repeat, putative [Stigmatella aurantiaca DW4/3-1]
gi|115365427|gb|EAU64464.1| TPR repeat, putative [Stigmatella aurantiaca DW4/3-1]
Length = 543
Score = 38.6 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 26/245 (10%), Positives = 74/245 (30%), Gaps = 12/245 (4%)
Query: 32 VCFLVGWERQSSRDVYLDSVTDVRYQREVY-EKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90
+ L +++ ++ ++ ++ + Q + Y ++L+E + KA++ F + + P
Sbjct: 263 LISLQAGKKEEAKKHFIKALRFNQEQAQAYQNLGFIYLEEGAYGKAHDNFQRALKVNPDY 322
Query: 91 GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150
AR +L ++ + ++ + + + + + + +
Sbjct: 323 LEARYNLGLTLMKMEKGEEAKKEFRTILAVNPNIANAHHNLGIIAYSEGKFEEAVEHIGQ 382
Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
+ + + AR + A +
Sbjct: 383 AAQLAPDVSNVWNDYGVALMELSRFADAREAFSTCVRLEAKN----PQCLNNLAIAQRKA 438
Query: 211 PRFQLVLANYSDAEHAE---EAMARLVEAYVALALM-DEAREVVSLIQERYPQGYWARYV 266
+ AE +A+ + Y L+ +E R ++ G +A+
Sbjct: 439 ALIDSAGKEERETLAAENTADALYTMAVHYNEKGLVAEEERTYKKCLRL---DGKYAKCH 495
Query: 267 ETLVK 271
L K
Sbjct: 496 YGLFK 500
>gi|260554754|ref|ZP_05826975.1| conserved hypothetical protein [Acinetobacter baumannii ATCC 19606]
gi|260411296|gb|EEX04593.1| conserved hypothetical protein [Acinetobacter baumannii ATCC 19606]
Length = 294
Score = 38.6 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 17/114 (14%), Positives = 37/114 (32%), Gaps = 13/114 (11%)
Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
K + M ++ + NS Y A F++ Y A + +
Sbjct: 193 KKAIAPMQNFIKNHPNSIYTGNAYFWLAEF------------HLATDPVNYNEAKKNYNV 240
Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMD-EAREVVSLIQERYPQGYWARYVET 268
V Y ++ A A+ +L + A + + + +Y + A++
Sbjct: 241 VANQYPNSSKAPRALYQLYSIAKDVDKNTVSANQYKNKLLSQYSKSEEAKFFNK 294
Score = 36.7 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA--LMDEAREVVSLIQERYP 258
K+G AI Q + N+ ++ + A L E ++A +EA++ +++ +YP
Sbjct: 187 YKQGGAKKAIAPMQNFIKNHPNSIYTGNAYFWLAEFHLATDPVNYNEAKKNYNVVANQYP 246
Query: 259 QG 260
Sbjct: 247 NS 248
>gi|194578859|ref|NP_001124075.1| transmembrane and TPR repeat-containing protein 2 [Danio rerio]
gi|190339924|gb|AAI63512.1| Si:ch211-161n3.1 [Danio rerio]
Length = 844
Score = 38.6 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 21/226 (9%), Positives = 48/226 (21%), Gaps = 10/226 (4%)
Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
++ +Y L + +A + + R P +
Sbjct: 595 CADIPDENLKDPHAHKSSVTSCLYNLGKLLHDQGQHEEALSVYKEAVRKMPRQFAPQSLY 654
Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK- 156
M ++A E + P+ Y + Q Y +A +
Sbjct: 655 NMMGEAYMRLNILEEAGHWYRESLKAKPDHIPAHLTYGKLLSIMGQKSEAERYFLKAIEL 714
Query: 157 -----LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
+ + + + N+ + A
Sbjct: 715 DPARGNCYMHYGQFLLEESRLAEAAAMAQKAAELDNEEFDVVFSAAHMLRQASLNEEAET 774
Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR-EVVSLIQER 256
+ D A+ L + EA + +Q +
Sbjct: 775 YYGKAADLRPDHPA---ALMNLGAILHLNGKLKEAESNYLRALQLK 817
>gi|2896142|gb|AAC03120.1| Tpr1 [Schizosaccharomyces pombe]
Length = 1039
Score = 38.6 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 25/189 (13%), Positives = 50/189 (26%), Gaps = 19/189 (10%)
Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
KA + + N+ A+ + + P + ++ A S
Sbjct: 181 KARILYAKGNYRSAFRLYQRALVSNPQ--FKPDPRIGIGLCFWNLDMKTDALSAWTRVQQ 238
Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
P++ VD L A + + LQ++
Sbjct: 239 LDPKNTVVDTYIGLYYYDLAFQNVNNDSFVQNYGKALQHI-----------------QRA 281
Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242
RN + RY + Y I + V+ N + + + AY +
Sbjct: 282 FKTRNNDPVASSILERYVYSKKNYEGCIKLAENVIQNSFSSSLIADGYYWMGRAYHQMGN 341
Query: 243 MDEAREVVS 251
++A
Sbjct: 342 NEKAMASYQ 350
>gi|145219355|ref|YP_001130064.1| TPR repeat-containing protein [Prosthecochloris vibrioformis DSM
265]
gi|145205519|gb|ABP36562.1| Tetratricopeptide TPR_2 repeat protein [Chlorobium phaeovibrioides
DSM 265]
Length = 465
Score = 38.6 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 22/212 (10%), Positives = 49/212 (23%), Gaps = 6/212 (2%)
Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
D + YE A F ++ + + + + P+ A + + + +
Sbjct: 166 DADFAEAWYELAYCKDLLDKFDESVQCYRRALDEEPYNINAWYNNGLVLSKMKRYDEALE 225
Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY---DQRATKLMLQYMSRIVERY 169
+ + + + A+ + L + E
Sbjct: 226 CYDMALAIADDFTSAWYNRANVLAITGRIAEAAESYRETLKHEPDDLNALYNLGIACEEL 285
Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
+ EY A + L + D+ E
Sbjct: 286 ELYREAIDCYRNCIQLSGDFPDAWFALACCQEAIDEYDDAFASIKAALDSVPDSI---EF 342
Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGY 261
+ E L +D A +I + P
Sbjct: 343 LLLRAEIEYNLNQLDSAISTYQIIIDLEPDSP 374
>gi|254725329|ref|ZP_05187112.1| putative ABC transporter, substrate-binding protein [Bacillus
anthracis str. A1055]
Length = 270
Score = 38.6 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 25/221 (11%), Positives = 54/221 (24%), Gaps = 4/221 (1%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K LT S ++ L + + + L E+ EKA L+++ +
Sbjct: 1 MKKLLLTALISTSIFGLAACGGKDNDEKKLVVGASNVPHAEILEKAKPLLEKKGIELEVK 60
Query: 79 YFNQCSRDFP---FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
F + +++ + + + + + Y
Sbjct: 61 KFQDYVLPNKSLADKDLDANYFQHIPYLEKEIKDKKYEFEVAGKIHLEPIGVYSQKYKSL 120
Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
A +I L + I++ VK + L K
Sbjct: 121 KELPDGATIIMSNSVADHGRGLAILQKEGILKIKDGVDPVKATPKDIADNPKNLKFKMDI 180
Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
+ D + E A +E+
Sbjct: 181 EPGLLPQVYNNKEGDAVLINSNYAI-DTKLNPEKDAIAIES 220
>gi|158338601|ref|YP_001519778.1| TPR domain-containing protein [Acaryochloris marina MBIC11017]
gi|158308842|gb|ABW30459.1| TPR domain protein [Acaryochloris marina MBIC11017]
Length = 287
Score = 38.6 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 26/206 (12%), Positives = 54/206 (26%), Gaps = 34/206 (16%)
Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
++ A+ + NF+KA +Y+ + P + S Q
Sbjct: 47 ETQVENLFNAAMEATNKGNFAKAEQYWTEALDFLPNNPAIWSNRGNSKISQGKFEAALV- 105
Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
+ V + + ++++E
Sbjct: 106 -------------DYDRSVELAPEQPDAYLNRGAVQEGLANWEAAIADYNKVIELDP--- 149
Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
+ AA G +G++ AA+ F+ + A
Sbjct: 150 --------------KEAAAYNNRGNAKAGQGDWNAALTDFETAMELSPQFAF---ARGNY 192
Query: 234 VEAYVALALMDEAREVVSLIQERYPQ 259
A + DEA + + + +YPQ
Sbjct: 193 ALALYQVGERDEAIKTMRNLVRKYPQ 218
>gi|149280033|ref|ZP_01886158.1| hypothetical protein PBAL39_24123 [Pedobacter sp. BAL39]
gi|149229230|gb|EDM34624.1| hypothetical protein PBAL39_24123 [Pedobacter sp. BAL39]
Length = 473
Score = 38.6 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 28/272 (10%), Positives = 64/272 (23%), Gaps = 27/272 (9%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVY--EKAVLFLKEQNFSKAY 77
K+ I I+ G + V LD D + VY + + + +
Sbjct: 1 MKYLHFIITIISFTLASGC----KKFVELDPPDDRLTESTVYATNETATSVLNGLYIRIA 56
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV--DYVYY 135
E N + L + ++ + Q + Y +
Sbjct: 57 ETNNVLTSYATTYMGFASDELKNHYLNAVSPYTQLYQNNVNIDTEIYWGTTYTLIYNCNV 116
Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQ----YMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
+ + + +V Y P V + + + +
Sbjct: 117 AIEGIENSTKLNSQLKLQLVGEAKFMRALCYYYLVNTYGRVPLVIKSDYRSYLMAKRAEV 176
Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE--------AMARLVEAYVALALM 243
++ + + A + E A A L Y+
Sbjct: 177 SDIYAQMIADLQDAQGKLSKNYLNGDALTPYSPGNAERVRPTYWAATALLARIYLYDKQW 236
Query: 244 DEAREVVSLIQER-------YPQGYWARYVET 268
+A S++ + P + + +
Sbjct: 237 AQAEAAASILIDNTSMFSLVAPSSVFLKNTQE 268
>gi|294778305|ref|ZP_06743731.1| tetratricopeptide repeat protein [Bacteroides vulgatus PC510]
gi|294447933|gb|EFG16507.1| tetratricopeptide repeat protein [Bacteroides vulgatus PC510]
Length = 285
Score = 38.6 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 25/216 (11%), Positives = 61/216 (28%), Gaps = 7/216 (3%)
Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
+ ++ + ++ Y +AV + +F + E F
Sbjct: 53 FSQRFNNRQSIEKALKQAQADVQYVEAVQHFDKGDFERFLEQFFLAIHSRYDIEKPLIKR 112
Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
+ + + L +++ Q + YYL+G D
Sbjct: 113 FIRKKLGIINNLKVENKRLKDQFHVQRKNLEKYAREYYLMGNECIIQAHDSRAAIANYDK 172
Query: 158 ML---QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
+ + R + + + V N+ + + RG+ A+ +
Sbjct: 173 AIELNPSYTDAWVRKGITLHNDKEYYEAEVCLNEAVRLSPALFKAIYNRGKNRLALDNIE 232
Query: 215 LVLANYSDA----EHAEEAMARLVEAYVALALMDEA 246
L ++ A +A +A + + +EA
Sbjct: 233 GALGDFDRAVSLKPEHPKAHEYFGDALMRVGKEEEA 268
>gi|297569747|ref|YP_003691091.1| hypothetical protein DaAHT2_1781 [Desulfurivibrio alkaliphilus
AHT2]
gi|296925662|gb|ADH86472.1| hypothetical protein DaAHT2_1781 [Desulfurivibrio alkaliphilus
AHT2]
Length = 239
Score = 38.6 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 10/47 (21%), Positives = 16/47 (34%), Gaps = 4/47 (8%)
Query: 224 EHAEEAMARLVEAYVALA----LMDEAREVVSLIQERYPQGYWARYV 266
A+EA+ L Y +AR+ + I +P A
Sbjct: 164 PPADEALYNLGLIYAHGDNPARDYQQARDYFARIAGEFPDSRLAEEA 210
>gi|281358385|ref|ZP_06244867.1| DNA uptake lipoprotein-like protein [Victivallis vadensis ATCC
BAA-548]
gi|281315212|gb|EFA99243.1| DNA uptake lipoprotein-like protein [Victivallis vadensis ATCC
BAA-548]
Length = 359
Score = 38.6 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 25/207 (12%), Positives = 49/207 (23%), Gaps = 41/207 (19%)
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
Y + + + +++ A + F
Sbjct: 30 YREGLALYQAKDYKAAGDKFEAAE-----------------------------------I 54
Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
P K + +++ + + VE + A +
Sbjct: 55 EADSPAIKANSIRAQIGAWRMCRLLYKEFEAIESLMERFPEYADFVELVKREYEIADAYY 114
Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
R+ +I F+ L AE A EA RL +
Sbjct: 115 QGKRDL------AFWSLRWIPWLVGDDKSIEVFEKALDRAPFAESAPEARLRLAYLFDQK 168
Query: 241 ALMDEAREVVSLIQERYPQGYWARYVE 267
+ E+ E + +I +P RY
Sbjct: 169 GKVKESLEQLRIIIRDFPDAKACRYAY 195
Score = 35.5 bits (79), Expect = 8.4, Method: Composition-based stats.
Identities = 35/162 (21%), Positives = 67/162 (41%)
Query: 74 SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
K+ E F + PFA A ++ L A++ GK +++ I +P++K Y
Sbjct: 135 DKSIEVFEKALDRAPFAESAPEARLRLAYLFDQKGKVKESLEQLRIIIRDFPDAKACRYA 194
Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
Y + ++ R D + + +E+Y ++P + + R+ A +
Sbjct: 195 YLALANGLYELSRRGDGDGAYNRESYELFKTFLEKYPDAPEAPWVKVRMVRSRDIQAGRL 254
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
E+ YY + G A+ VL +Y D A+ + LV+
Sbjct: 255 YELAEYYERAGRKEASERYLAQVLKDYPDTTSADASERLLVK 296
>gi|254975640|ref|ZP_05272112.1| putative lipoprotein [Clostridium difficile QCD-66c26]
gi|255093027|ref|ZP_05322505.1| putative lipoprotein [Clostridium difficile CIP 107932]
gi|255314769|ref|ZP_05356352.1| putative lipoprotein [Clostridium difficile QCD-76w55]
gi|255517444|ref|ZP_05385120.1| putative lipoprotein [Clostridium difficile QCD-97b34]
gi|255650554|ref|ZP_05397456.1| putative lipoprotein [Clostridium difficile QCD-37x79]
gi|306520502|ref|ZP_07406849.1| putative lipoprotein [Clostridium difficile QCD-32g58]
Length = 219
Score = 38.6 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 14/96 (14%), Positives = 30/96 (31%), Gaps = 12/96 (12%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
+ + + SI FLVG ++ L + +L++ N+ KA E
Sbjct: 1 MRGRVILLISILSIFLVGCSFNKKDEINLVE------------QGKTYLEKHNYKKAMES 48
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
+ + AR + + + +
Sbjct: 49 LSSALEEDSTNENARAMYMQAMRMSNMTEFEELKNY 84
>gi|303256188|ref|ZP_07342204.1| putative tol-pal system protein YbgF [Burkholderiales bacterium
1_1_47]
gi|331001244|ref|ZP_08324870.1| tol-pal system protein YbgF [Parasutterella excrementihominis YIT
11859]
gi|302860917|gb|EFL83992.1| putative tol-pal system protein YbgF [Burkholderiales bacterium
1_1_47]
gi|329568971|gb|EGG50767.1| tol-pal system protein YbgF [Parasutterella excrementihominis YIT
11859]
Length = 230
Score = 38.6 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 17/105 (16%), Positives = 33/105 (31%), Gaps = 2/105 (1%)
Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
+ N K R A +E++ ++G+ AI F + YS +
Sbjct: 89 LSNRLNEMDPKAKAAAAASDREISAKQELDRCLSVFQKGDANQAIKCFSGMTQKYSKTKV 148
Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
+A+ L +Y + + Y A+ E +
Sbjct: 149 YPDALYWLGSSYYMKGNFAQTIATEQRLISGY--SKHAKVPEAYL 191
>gi|284040356|ref|YP_003390286.1| hypothetical protein Slin_5521 [Spirosoma linguale DSM 74]
gi|283819649|gb|ADB41487.1| Tetratricopeptide repeat protein [Spirosoma linguale DSM 74]
Length = 607
Score = 38.6 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 25/211 (11%), Positives = 64/211 (30%), Gaps = 3/211 (1%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
+K ++L + ++ ++Q + + ++ L +A +QY G A L +
Sbjct: 391 DKGDIYLLKGEPWESTLLYSQVEKSQKEELLGYEAKLKNAKLQYYRGNMAVAKDLLDVLK 450
Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
D + + + R + + +
Sbjct: 451 LATSREIANDAEQLSLLIVDNTGLDSTEAAMRHY--ADIDLMLFQNKTEEAVLELNKMLK 508
Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV-AL 240
+ + +LK+G+ A+ + ++A+Y + ++A + Y L
Sbjct: 509 TYPEHSLVDEILWLRANTFLKQGKNAEALEDLKKIVASYPNDILGDDAQFMQGKIYEDRL 568
Query: 241 ALMDEAREVVSLIQERYPQGYWARYVETLVK 271
A E + +YP + +
Sbjct: 569 KDKQAAMEAYQKVLTQYPGSIYGAEARKRFR 599
>gi|71274607|ref|ZP_00650895.1| TPR repeat [Xylella fastidiosa Dixon]
gi|71900903|ref|ZP_00683018.1| TPR repeat [Xylella fastidiosa Ann-1]
gi|170730869|ref|YP_001776302.1| type IV pilus assembly protein PilF [Xylella fastidiosa M12]
gi|71164339|gb|EAO14053.1| TPR repeat [Xylella fastidiosa Dixon]
gi|71729315|gb|EAO31431.1| TPR repeat [Xylella fastidiosa Ann-1]
gi|167965662|gb|ACA12672.1| type IV pilus assembly protein PilF [Xylella fastidiosa M12]
Length = 269
Score = 38.6 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 23/267 (8%), Positives = 51/267 (19%), Gaps = 29/267 (10%)
Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE--------------- 62
L + ++ L G S + VY
Sbjct: 1 MLQRDISLALAFSSLLILSGCLVMSDKRETRIKSVQNLAP--VYNVRDDAKTRRRVALTQ 58
Query: 63 ---KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
+A + A E + + + +L + + + +
Sbjct: 59 TLGRAYNQFNAGD-DVAAEKLLEEVLRQDTSSIDAWTLRATIYSKRGDVVHSGEYYRKAA 117
Query: 120 YITQYPESKNVDYVYYLVGMSY------AQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
+ +Y +L Y L +
Sbjct: 118 QLAPQRGDVLNNYGAWLCANGYPAEALVWFERAMADPAYGEQPGTLANSGGCALQAGQRD 177
Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
A + R + Y A + LA +
Sbjct: 178 RADHDLRRALELDPSNAYALESMARNEYDKHRYFEARAFSERRLAT--TVPATASVLKLA 235
Query: 234 VEAYVALALMDEAREVVSLIQERYPQG 260
++ L A + + +P+
Sbjct: 236 IQIEQELGDRAAASRYQQRLVKEFPET 262
>gi|283780558|ref|YP_003371313.1| TPR repeat-containing protein [Pirellula staleyi DSM 6068]
gi|283439011|gb|ADB17453.1| TPR repeat-containing protein [Pirellula staleyi DSM 6068]
Length = 548
Score = 38.6 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 16/115 (13%), Positives = 42/115 (36%), Gaps = 1/115 (0%)
Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
+ ++ ++ +Y + + Y K Y A + + L++
Sbjct: 45 WKQLREVERYQLQIAEKYYRDQDYKVAAAEYEKFLSLYEESVGAPHAQLRWSLAQVQLRK 104
Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
A FQ V+ + +++ A A + Y + + EA++ + + + +P
Sbjct: 105 QN-TAIKEGFQSVIDYWPESQQAIAAKFYMGRTYKEIGRVAEAKKTLRALVKDHP 158
>gi|332519201|ref|ZP_08395668.1| hypothetical protein LacalDRAFT_0280 [Lacinutrix algicola 5H-3-7-4]
gi|332045049|gb|EGI81242.1| hypothetical protein LacalDRAFT_0280 [Lacinutrix algicola 5H-3-7-4]
Length = 591
Score = 38.2 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 35/256 (13%), Positives = 87/256 (33%), Gaps = 10/256 (3%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQN-------F 73
K + T+ +A + + SRD + Y+ A L L+ + F
Sbjct: 327 KTSRTVNLRVAYAHFLAFNLDKSRDAVAFLKESLNINYSSYQLAQLKLELGDILVLEEKF 386
Query: 74 SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
++A Y+ Q R +++ + A Y G ++ A S + + D +
Sbjct: 387 NEALIYYTQIQRALKNTKISQLARFKVAKTSYYKGDFKWAESQLKILKKSTSQLTANDAL 446
Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
+ +S + + + + + + + +
Sbjct: 447 DLKLLISDNKQGDSLQTALKKYAKA--DLLAFQNKKNQAITILSNIIQEHKTETIIPQAL 504
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA-LALMDEAREVVSL 252
++ + + + ++ A + +++NY+D ++A+ L E Y L L ++A+E+
Sbjct: 505 LKQAQLFEDKADFEKAKSNYLQIISNYTDGILIDDAIFALAEIYNNQLQLPEKAKELYER 564
Query: 253 IQERYPQGYWARYVET 268
I + +
Sbjct: 565 IIFNHADSIYFVDSRK 580
>gi|295670772|ref|XP_002795933.1| DnaJ domain-containing protein [Paracoccidioides brasiliensis Pb01]
gi|226284066|gb|EEH39632.1| DnaJ domain-containing protein [Paracoccidioides brasiliensis Pb01]
Length = 746
Score = 38.2 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 26/227 (11%), Positives = 59/227 (25%), Gaps = 19/227 (8%)
Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL---LMSAFVQYSAGKYQQAASLGEEY 120
F K ++ KA + + + P + + +SA A + + A E
Sbjct: 257 GNKFFKAGDYQKAIQEYTKAVEAQPSSSTYLSNRAAAYISAHRYLEALEDAKLADELEPG 316
Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
+ Y + + + A +
Sbjct: 317 NQKIMHRLARIYTSLGRPVEALDIYSKIQPPVSAKDKGPSEAMLHHITQAEESLREDKGG 376
Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY------------SDAEHAEE 228
+T+ A K + G ++ + ++ AN D +
Sbjct: 377 SMTLYCLDQAVKGLGAGIQQPRKWRLMRVEAYLKMGSANALGDAQNIVMSILRDNNQDPD 436
Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQG----YWARYVETLVK 271
A+ + ++A + L P + R V+ L++
Sbjct: 437 ALFLRGRLFYVQGENEQAIKHFKLALSLDPDSSQAVKYLRMVQKLLR 483
>gi|110637942|ref|YP_678149.1| TPR repeat-containing protein [Cytophaga hutchinsonii ATCC 33406]
gi|110280623|gb|ABG58809.1| conserved hypothetical protein, with TPR repeat [Cytophaga
hutchinsonii ATCC 33406]
Length = 1012
Score = 38.2 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 29/238 (12%), Positives = 61/238 (25%), Gaps = 10/238 (4%)
Query: 43 SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102
+ Y + K + A + + + + + +
Sbjct: 160 DKFNKCKGAKHQYTPAANYYAGYIEFKNGEYDTAIADLQKAAESKEYKPLVAVLIANIYY 219
Query: 103 VQYSAGK----------YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
Q + + A + ++ Y + +
Sbjct: 220 RQAKYDELIPYAEKVIADKSAGPNTNDVKLILADAYFFKQEYAKATPLFKDYLTATGTKS 279
Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
+ + + V + T + + +G YLK AA+
Sbjct: 280 LTPDMKYRIGFSSYKAADYKQAVDMLQAIATDKDSLGQSSAYILGLSYLKSENKNAALIS 339
Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
F+L + A EEAM + L EA + E+YP+ Y + L+
Sbjct: 340 FELAQRSVFSAVINEEAMFLYAKITSDLGRFTEATPRLKNFIEKYPKSYHMQEAYELL 397
>gi|114567177|ref|YP_754331.1| hypothetical protein Swol_1662 [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
gi|114338112|gb|ABI68960.1| hypothetical protein Swol_1662 [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
Length = 416
Score = 38.2 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 14/69 (20%), Positives = 27/69 (39%)
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+ R Y EY A F ++ + +E++ L Y D+AR+ + +
Sbjct: 335 YYLARVYYINSEYKNAEKYFLDYTRDFPSTNYYDESLFYLGCIYYFDQQEDKARQALEKL 394
Query: 254 QERYPQGYW 262
+E P +
Sbjct: 395 REVVPDSGY 403
>gi|326912587|ref|XP_003202630.1| PREDICTED: transmembrane and TPR repeat-containing protein 2-like,
partial [Meleagris gallopavo]
Length = 808
Score = 38.2 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 19/219 (8%), Positives = 48/219 (21%), Gaps = 9/219 (4%)
Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
++ +Y LF ++ ++ A + + + P +
Sbjct: 559 CSEIPDENLKDPHAHKSSVTSCLYNLGKLFHEQGHYEDALTVYKEAIQKMPRQFAPQSLY 618
Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK- 156
M + +A E + + Y + + Y +A +
Sbjct: 619 NMMGEAYMRMSRLPEAEHWYVESLRSKSDHIPAHLTYGKLLALTGRKSEAEKYFVKAIQL 678
Query: 157 -----LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
+ + + + N + A
Sbjct: 679 DPTKGNCYMHYGQFLLEESRLIEAAEMAKKAAELDNTEFDVVFNAAHMLRQASLNEEAEK 738
Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
++L + A+ L + EA E
Sbjct: 739 YYELAAGLRPNYPA---ALMNLGAILHLNGKLKEAEENY 774
>gi|296127253|ref|YP_003634505.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563]
gi|296019069|gb|ADG72306.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563]
Length = 946
Score = 38.2 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 13/133 (9%), Positives = 30/133 (22%), Gaps = 9/133 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K + I++ L + + RE Y A ++ ++ A E
Sbjct: 1 MKKLLIIFSIFISLSSLFA--------QNVAPNDERNIDREFYN-AEKLFFQKKYNFARE 51
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
F + P + + A + S +
Sbjct: 52 AFLLYLKRRPLSTNDMLYYYIGACYFQDKQYQNAIDYYKLAFDINDSYSYCNNIANSYYQ 111
Query: 139 MSYAQMIRDVPYD 151
+ +
Sbjct: 112 LKNYEDALLWYNR 124
>gi|221109111|ref|XP_002158249.1| PREDICTED: similar to CG6915 CG6915-PA [Hydra magnipapillata]
Length = 1750
Score = 38.2 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 21/213 (9%), Positives = 56/213 (26%), Gaps = 4/213 (1%)
Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF---PFAGVARKSLL 98
+ + + + + + + +A EY+ +C
Sbjct: 894 EKQITINQDQLNPDVAVFLLNLGLSYNAKGQYDQAIEYYKECLDMQKLIYQDQSNSNVAD 953
Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
+ + Q + Y V + ++ + V Y +
Sbjct: 954 TLNNLGSAFYGKGQFDEAIKFYKNSLKMRNLVYHDQTHPSIANSFNNLGVAYRAKGQYDQ 1013
Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
++ + Y + F V + L +Y L + ++ F+++
Sbjct: 1014 AIGYYEKIQEFYKFIYREEPHFDVAASLHNLGTVYNAKEQYDLAINCFKKSLKTFKIIYK 1073
Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
+++ L AY D+A +
Sbjct: 1074 KKPH-PKVSDSLNSLGTAYHLKGYYDQAIKYFK 1105
Score = 37.5 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 23/194 (11%), Positives = 55/194 (28%), Gaps = 6/194 (3%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
V + + + +A Y+ + + F ++A + Y
Sbjct: 1000 NLGVAYRAKGQYDQAIGYYEKIQEFYKFIYREEPHFDVAASLHNLGTVYNAKEQYDLAIN 1059
Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDV----PYDQRATKLMLQYMSRIVERYTNSPYVKG 177
K +Y + + + ++Y + N+ Y
Sbjct: 1060 CFKKSLKTFKIIYKKKPHPKVSDSLNSLGTAYHLKGYYDQAIKYFKESL-EMQNTIYQNQ 1118
Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
+++ L + G+Y Y ++ +L+ + +++ L AY
Sbjct: 1119 PNPRISISLINLGSAFYTKGQYDEAIKYYNDSLKMRKLIYLDKPH-PAIADSLNNLGAAY 1177
Query: 238 VALALMDEAREVVS 251
A DEA +
Sbjct: 1178 NAKGEYDEATKYYK 1191
>gi|119486472|ref|ZP_01620530.1| kinesin light chain-like protein [Lyngbya sp. PCC 8106]
gi|119456374|gb|EAW37505.1| kinesin light chain-like protein [Lyngbya sp. PCC 8106]
Length = 1127
Score = 38.2 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 28/247 (11%), Positives = 65/247 (26%), Gaps = 17/247 (6%)
Query: 17 YQLYKFALTIFFSIAVCFLVGWER-----------QSSRDVYLDSVTDVRYQREVYEKAV 65
Y + + +L F + V VG +S + + ++ + ++AV
Sbjct: 59 YPMKRTSLNPFLWLTVF--VGCSGLLTAIPPVIGQTNSAVLLVQQSDELEEANRLEQQAV 116
Query: 66 LFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP 125
++ +++A + + + + Q E + Q
Sbjct: 117 QLYQQGKYNEAIPILKRVLEIIERLLGENHPDVAQSLNNLAILYRDQGRYSEAEPLFQRS 176
Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
+ + + + + V
Sbjct: 177 LTIYEKALGENHPDVAQSLNNLAQLYYSQGRYSEAEPLHQRSLAIREKALGENHPDVATS 236
Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRF-QLVLANYSDAEHAEEAMARLVEAYVALALMD 244
N LA GRY Y ++ + + N+ D ++ L YV+ D
Sbjct: 237 LNNLAQLYDSQGRYSEAEPLYRRSLAILEKALGENHPD---VATSLNNLATLYVSQGRYD 293
Query: 245 EAREVVS 251
+A +
Sbjct: 294 KAEPLYR 300
>gi|86609922|ref|YP_478684.1| TPR repeat-containing protein [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86558464|gb|ABD03421.1| TPR repeat protein [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 392
Score = 38.2 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 12/194 (6%), Positives = 36/194 (18%)
Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
+ +A + + +A + + P + ++ +
Sbjct: 146 EARFNQANTLRQLGRYEEALRAYERALALSPDSPETWYLHGLTLASLGRWQGSLISYEKA 205
Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
+ + Y + + + +
Sbjct: 206 LAINPVNAQVWQSRGLALFHLERYVDALASYERALQLGSESASLWAGHALAHHRLGNPME 265
Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
A Q + + L + Q EA Y
Sbjct: 266 ALNSYDRALAQDPKRPQIWVQRGLVLMDLNLYELAIQSFDRALQMDPSNAEAHYAKACCY 325
Query: 238 VALALMDEAREVVS 251
+ +A + +
Sbjct: 326 AWEGQVPQALQALE 339
>gi|319793388|ref|YP_004155028.1| toL-pal system protein ybgf [Variovorax paradoxus EPS]
gi|315595851|gb|ADU36917.1| tol-pal system protein YbgF [Variovorax paradoxus EPS]
Length = 249
Score = 38.2 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 18/87 (20%), Positives = 31/87 (35%)
Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243
A+ +G Y AI F+ +L+ D A EA+ + + L
Sbjct: 159 PQSGYNASALFWLGNAQYATRNYNEAIANFRSMLSLAPDHAKAPEAVLSIANCQIELKDT 218
Query: 244 DEAREVVSLIQERYPQGYWARYVETLV 270
AR + + + YPQ A+ +
Sbjct: 219 RSARRTLEDLAKAYPQSEAAQAGRERL 245
>gi|261197553|ref|XP_002625179.1| DnaJ domain-containing protein [Ajellomyces dermatitidis SLH14081]
gi|239595809|gb|EEQ78390.1| DnaJ domain-containing protein [Ajellomyces dermatitidis SLH14081]
Length = 762
Score = 38.2 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 28/228 (12%), Positives = 60/228 (26%), Gaps = 19/228 (8%)
Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL---LMSAFVQYSAGKYQQAASLGEE 119
F K +F KA + + + P + + +SA + A + + A E
Sbjct: 268 AGNKFFKAGDFQKAIQEYTKAVEAQPTSSTYLSNRAAAYISAHRYHEALEDAKLADELEP 327
Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
+ Y + + A +
Sbjct: 328 GNQKIMHRLARIYTSLGRPTEALSIYSRIQPPVTAKDKGPAEAMLHHITQAEGLLREDRG 387
Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY------------SDAEHAE 227
+T+ A K + +G ++ + A ++ N D
Sbjct: 388 GSMTLYCLDQAVKGLGVGVTQPRKWRLMRAEAYLKMGNVNTLGDAQNIVMSMLRDNNQDP 447
Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQG----YWARYVETLVK 271
+A+ + A ++A L P + R V+ L++
Sbjct: 448 DALLIRGRLFYAQGENEQAIRHFKLALNLDPDSTQAVRYLRMVQKLLR 495
>gi|157962383|ref|YP_001502417.1| Tol-Pal system YbgF [Shewanella pealeana ATCC 700345]
gi|157847383|gb|ABV87882.1| Tol-Pal system YbgF [Shewanella pealeana ATCC 700345]
Length = 241
Score = 38.2 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
K +Y AAIP F + Y ++ +A A L + + D A + + + E+Y
Sbjct: 133 KEKKYEAAIPAFAQFIQRYPNSSYAPNANYWLGQLLYNKSEFDGASKAFTTVVEKYTDS- 191
Query: 262 WARYVETLVK 271
++ E+LVK
Sbjct: 192 -SKRGESLVK 200
>gi|30265024|ref|NP_847401.1| ABC transporter, substrate-binding protein, putative [Bacillus
anthracis str. Ames]
gi|47530526|ref|YP_021875.1| ABC transporter substrate-binding protein [Bacillus anthracis str.
'Ames Ancestor']
gi|49187843|ref|YP_031096.1| ABC transporter substrate-binding protein [Bacillus anthracis str.
Sterne]
gi|165870825|ref|ZP_02215477.1| putative ABC transporter, substrate-binding protein [Bacillus
anthracis str. A0488]
gi|167634905|ref|ZP_02393223.1| putative ABC transporter, substrate-binding protein [Bacillus
anthracis str. A0442]
gi|167639949|ref|ZP_02398217.1| putative ABC transporter, substrate-binding protein [Bacillus
anthracis str. A0193]
gi|170685705|ref|ZP_02876928.1| putative ABC transporter, substrate-binding protein [Bacillus
anthracis str. A0465]
gi|170707009|ref|ZP_02897466.1| putative ABC transporter, substrate-binding protein [Bacillus
anthracis str. A0389]
gi|177652276|ref|ZP_02934779.1| putative ABC transporter, substrate-binding protein [Bacillus
anthracis str. A0174]
gi|190567225|ref|ZP_03020140.1| putative ABC transporter, substrate-binding protein [Bacillus
anthracis Tsiankovskii-I]
gi|227817756|ref|YP_002817765.1| putative ABC transporter, substrate-binding protein [Bacillus
anthracis str. CDC 684]
gi|229601277|ref|YP_002869226.1| putative ABC transporter, substrate-binding protein [Bacillus
anthracis str. A0248]
gi|254687317|ref|ZP_05151174.1| putative ABC transporter, substrate-binding protein [Bacillus
anthracis str. CNEVA-9066]
gi|254735346|ref|ZP_05193054.1| putative ABC transporter, substrate-binding protein [Bacillus
anthracis str. Western North America USA6153]
gi|254740613|ref|ZP_05198304.1| putative ABC transporter, substrate-binding protein [Bacillus
anthracis str. Kruger B]
gi|254753125|ref|ZP_05205161.1| putative ABC transporter, substrate-binding protein [Bacillus
anthracis str. Vollum]
gi|254761467|ref|ZP_05213488.1| putative ABC transporter, substrate-binding protein [Bacillus
anthracis str. Australia 94]
gi|30259701|gb|AAP28887.1| putative ABC transporter, substrate-binding protein [Bacillus
anthracis str. Ames]
gi|47505674|gb|AAT34350.1| putative ABC transporter, substrate-binding protein [Bacillus
anthracis str. 'Ames Ancestor']
gi|49181770|gb|AAT57146.1| ABC transporter, substrate-binding protein, putative [Bacillus
anthracis str. Sterne]
gi|164713334|gb|EDR18859.1| putative ABC transporter, substrate-binding protein [Bacillus
anthracis str. A0488]
gi|167512030|gb|EDR87408.1| putative ABC transporter, substrate-binding protein [Bacillus
anthracis str. A0193]
gi|167529655|gb|EDR92404.1| putative ABC transporter, substrate-binding protein [Bacillus
anthracis str. A0442]
gi|170128112|gb|EDS96982.1| putative ABC transporter, substrate-binding protein [Bacillus
anthracis str. A0389]
gi|170670169|gb|EDT20909.1| putative ABC transporter, substrate-binding protein [Bacillus
anthracis str. A0465]
gi|172082282|gb|EDT67348.1| putative ABC transporter, substrate-binding protein [Bacillus
anthracis str. A0174]
gi|190561729|gb|EDV15699.1| putative ABC transporter, substrate-binding protein [Bacillus
anthracis Tsiankovskii-I]
gi|227003290|gb|ACP13033.1| putative ABC transporter, substrate-binding protein [Bacillus
anthracis str. CDC 684]
gi|229265685|gb|ACQ47322.1| putative ABC transporter, substrate-binding protein [Bacillus
anthracis str. A0248]
Length = 270
Score = 38.2 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 25/221 (11%), Positives = 54/221 (24%), Gaps = 4/221 (1%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K LT S ++ L + + + L E+ EKA L+++ +
Sbjct: 1 MKKLLLTALISTSIFGLAACGGKDNDEKKLVVGASNVPHAEILEKAKPLLEKKGIELEVK 60
Query: 79 YFNQCSRDFP---FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
F + +++ + + + + + Y
Sbjct: 61 KFQDYVLPNKSLADKDLDANYFQHIPYLEKEIKDKKYEFEVAGKIHLEPIGVYSQKYKSL 120
Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
A +I L + I++ VK + L K
Sbjct: 121 KELPDGATIIMSNSVADHGRGLAILQKEGILKIKDGVDPVKATPKDIADNPKNLKFKTDI 180
Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
+ D + E A +E+
Sbjct: 181 EPGLLPQVYNNKEGDAVLINSNYAI-DTKLNPEKDAIAIES 220
>gi|83943920|ref|ZP_00956377.1| hypothetical protein EE36_09755 [Sulfitobacter sp. EE-36]
gi|83954493|ref|ZP_00963204.1| hypothetical protein NAS141_14768 [Sulfitobacter sp. NAS-14.1]
gi|83840777|gb|EAP79948.1| hypothetical protein NAS141_14768 [Sulfitobacter sp. NAS-14.1]
gi|83845167|gb|EAP83047.1| hypothetical protein EE36_09755 [Sulfitobacter sp. EE-36]
Length = 283
Score = 38.2 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 10/48 (20%), Positives = 19/48 (39%)
Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
A EA+ +L + AL EA + + R+P + ++
Sbjct: 228 PAGPVAAEALYQLGSSLGALGQTQEACVTLGEVASRFPTSPFVAQAQS 275
>gi|239606806|gb|EEQ83793.1| DnaJ domain-containing protein [Ajellomyces dermatitidis ER-3]
Length = 765
Score = 38.2 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 28/228 (12%), Positives = 60/228 (26%), Gaps = 19/228 (8%)
Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL---LMSAFVQYSAGKYQQAASLGEE 119
F K +F KA + + + P + + +SA + A + + A E
Sbjct: 268 AGNKFFKAGDFQKAIQEYTKAVEAQPTSSTYLSNRAAAYISAHRYHEALEDAKLADELEP 327
Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
+ Y + + A +
Sbjct: 328 GNQKIMHRLARIYTSLGRPTEALSIYSRIQPPVTAKDKGPAEAMLHHITQAEGLLREDRG 387
Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY------------SDAEHAE 227
+T+ A K + +G ++ + A ++ N D
Sbjct: 388 GSMTLYCLDQAVKGLGVGVTQPRKWRLMRAEAYLKMGNVNTLGDAQNIVMSMLRDNNQDP 447
Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQG----YWARYVETLVK 271
+A+ + A ++A L P + R V+ L++
Sbjct: 448 DALLIRGRLFYAQGENEQAIRHFKLALNLDPDSTQAVRYLRMVQKLLR 495
>gi|229076361|ref|ZP_04209326.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
cereus Rock4-18]
gi|229105601|ref|ZP_04236235.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
cereus Rock3-28]
gi|228677871|gb|EEL32114.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
cereus Rock3-28]
gi|228706796|gb|EEL59004.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
cereus Rock4-18]
Length = 270
Score = 38.2 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 12/70 (17%), Positives = 22/70 (31%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K LT S ++ L + + L E+ EKA L+++ +
Sbjct: 1 MKKLLLTALISTSIFGLAACGGKDKDEKKLVVGASNVPHAEILEKAKPLLEKKGIELEIK 60
Query: 79 YFNQCSRDFP 88
F
Sbjct: 61 KFQDYVLPNK 70
>gi|326675996|ref|XP_682966.5| PREDICTED: transmembrane and TPR repeat-containing protein 2-like,
partial [Danio rerio]
Length = 617
Score = 38.2 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 21/229 (9%), Positives = 55/229 (24%), Gaps = 10/229 (4%)
Query: 35 LVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR 94
V S ++ +Y L ++ + +A + + + P +
Sbjct: 365 FVTCAEISDENLKDPHAHKSSVTSCLYNLGKLLHEQGHQEEAISVYKEAIQKMPRQFAPQ 424
Query: 95 KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
M K +A +E + P+ Y + Q + +A
Sbjct: 425 SLYNMMGEAFMRLNKLTEAEHWYKESLRAKPDHIPAHLTYGKLLAMTGQKTEAEKFFLKA 484
Query: 155 TK------LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
+ + + + + + + A
Sbjct: 485 IELDPTKGNCYMHYGQFLLEESRLLEAAEMAEKAAQLDTEEFDVVFSAAHMLRQASLNDA 544
Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR-EVVSLIQER 256
A ++ + + A+ L + EA + +Q +
Sbjct: 545 AEKYYRQAASLRPNYPA---ALMNLGAILHLNGKLQEAEANYLRALQLK 590
>gi|320535947|ref|ZP_08036012.1| hypothetical protein HMPREF9554_00737 [Treponema phagedenis F0421]
gi|320147198|gb|EFW38749.1| hypothetical protein HMPREF9554_00737 [Treponema phagedenis F0421]
Length = 528
Score = 38.2 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 8/49 (16%), Positives = 17/49 (34%), Gaps = 3/49 (6%)
Query: 226 AEEAMARLVEAYVALA---LMDEAREVVSLIQERYPQGYWARYVETLVK 271
+EA +AY + A + + + +PQ W ++
Sbjct: 470 IDEAWFLRGQAYELNGPNRNIRLALDAYQTVTKTFPQSQWWEKSNDRIR 518
>gi|311694763|gb|ADP97636.1| tetratricopeptide TPR_2 repeat protein [marine bacterium HP15]
Length = 923
Score = 38.2 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 12/55 (21%), Positives = 23/55 (41%)
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
++ + + G+ A+ R + ++ Y + EA RL E+ A EA
Sbjct: 117 YQMAKAHALTGQQDASFQRLKQLVGLYPKSPLVPEARFRLAESAFAAGRYTEAET 171
>gi|300867655|ref|ZP_07112302.1| hypothetical protein OSCI_3440027 [Oscillatoria sp. PCC 6506]
gi|300334366|emb|CBN57474.1| hypothetical protein OSCI_3440027 [Oscillatoria sp. PCC 6506]
Length = 1196
Score = 38.2 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 30/214 (14%), Positives = 56/214 (26%), Gaps = 6/214 (2%)
Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
Y + Y++ F +A +++ P A + + K
Sbjct: 524 KPDYHQAWYKRGNALGDLGQFEEALASYDKTIEIKPDHQEAWFNRGWALRKLGRFEKAIT 583
Query: 113 AASLGEEYITQYPESKNV-DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
+ E E+ Y +G + + + R
Sbjct: 584 SYDKAIEIKHDDHEAWFYRGYALDDLGRFEEAIASYDKAIEIKHDDHEAWFYRGYALGEL 643
Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYY--LKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
+ + Y V + R + G++ AI + V+ D EA
Sbjct: 644 GRFEEAIASYDKVIEFKPDDYYAWNNRGWALQNLGQFEEAIASYDKVIEFKPD---KHEA 700
Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
A L +EA + E P Y+A
Sbjct: 701 WYNRGVALFNLGRNEEAIASYEKVIEFKPDDYYA 734
>gi|7496625|pir||T15670 hypothetical protein C27H5.5 - Caenorhabditis elegans
Length = 1332
Score = 38.2 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 23/199 (11%), Positives = 52/199 (26%), Gaps = 4/199 (2%)
Query: 66 LFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP 125
FL Q++ A N + SL + Y + + A+ ++
Sbjct: 516 DFLSNQDYEGAISLLNHKLKAGNLDREEEDSLQLWLAHCYYRLRNYEEAANVYTFLMNKD 575
Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
++ VY Y + + + R++ + +
Sbjct: 576 DAPAELGVYLACCKFYLKQYIEAKSIAEKCPKTPLCI-RLMMNVSLRLNDEKRILTFHSS 634
Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
+ + R Y AI + VL + + Y +
Sbjct: 635 LGDTLEDRLSLAGVNYSRMHYQDAIEVYTSVLQTSPNLIGL---NVNMALCYAKMDYPHV 691
Query: 246 AREVVSLIQERYPQGYWAR 264
A ++ +P +A+
Sbjct: 692 AYNLIKNYLRNFPNSPFAK 710
>gi|327351273|gb|EGE80130.1| hypothetical protein BDDG_03071 [Ajellomyces dermatitidis ATCC
18188]
Length = 765
Score = 38.2 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 28/228 (12%), Positives = 60/228 (26%), Gaps = 19/228 (8%)
Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL---LMSAFVQYSAGKYQQAASLGEE 119
F K +F KA + + + P + + +SA + A + + A E
Sbjct: 268 AGNKFFKAGDFQKAIQEYTKAVEAQPTSSTYLSNRAAAYISAHRYHEALEDAKLADELEP 327
Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
+ Y + + A +
Sbjct: 328 GNQKIMHRLARIYTSLGRPTEALSIYSRIQPPVTAKDKGPAEAMLHHITQAEGLLREDRG 387
Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY------------SDAEHAE 227
+T+ A K + +G ++ + A ++ N D
Sbjct: 388 GSMTLYCLDQAVKGLGVGVTQPRKWRLMRAEAYLKMGNVNTLGDAQNIVMSMLRDNNQDP 447
Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQG----YWARYVETLVK 271
+A+ + A ++A L P + R V+ L++
Sbjct: 448 DALLIRGRLFYAQGENEQAIRHFKLALNLDPDSTQAVRYLRMVQKLLR 495
>gi|297529273|ref|YP_003670548.1| hypothetical protein GC56T3_0929 [Geobacillus sp. C56-T3]
gi|297252525|gb|ADI25971.1| Tetratricopeptide TPR_2 repeat protein [Geobacillus sp. C56-T3]
Length = 220
Score = 38.2 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 22/215 (10%), Positives = 52/215 (24%), Gaps = 10/215 (4%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
E+ + +++E + +A F+ P ++ K +
Sbjct: 6 EQGLAYMREGKYEEAIRCFSAAVEQHPDDPAGYINIGTVLVAAGEEEKALDCFRQALKID 65
Query: 122 TQYPESKN-VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
+ + + V+Y + + +
Sbjct: 66 KKAAAAYYGMGTVHYKREQFTKAKDMFERALGLGLDDADTHFMLGMSLWRL-----EMPR 120
Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA----EHAEEAMARLVEA 236
+ A + G +A + + +A L
Sbjct: 121 LALPYLQRAAELNETDAEALFQLGLCLATLDYVDEAKRYFEKTLELDPRHADAYYNLGVI 180
Query: 237 YVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
Y +D AR + + E P A Y + L++
Sbjct: 181 YAYKDELDAARNMFAAALEAKPDHVLAGYGKKLME 215
>gi|258404440|ref|YP_003197182.1| hypothetical protein Dret_0302 [Desulfohalobium retbaense DSM 5692]
gi|257796667|gb|ACV67604.1| conserved hypothetical protein [Desulfohalobium retbaense DSM 5692]
Length = 705
Score = 38.2 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 10/147 (6%), Positives = 38/147 (25%), Gaps = 13/147 (8%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ L + I + G V T + + E+A + QN++++
Sbjct: 34 MMPQKLCLICLIGFVLISGCA------VKPPLPTQEKPPTALEEQAARMWQAQNYARSLR 87
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+ + + +++ + A
Sbjct: 88 LYQELLQTQDLDQETQRTAWRRVSRSALELGRFERAVQSLRQ-------WAQVDPKTREN 140
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRI 165
++ ++ + + +++ +
Sbjct: 141 WTWHELYTQALGETEGAQKAREHLHTV 167
>gi|26246713|ref|NP_752753.1| hypothetical protein c0823 [Escherichia coli CFT073]
gi|26107112|gb|AAN79296.1|AE016757_200 Putative conserved protein [Escherichia coli CFT073]
Length = 67
Score = 38.2 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 12/61 (19%), Positives = 24/61 (39%)
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
F V+ NY + A +AM ++ +A+ V + +YP A+ +
Sbjct: 4 RYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKYPGTDGAKQAQKR 63
Query: 270 V 270
+
Sbjct: 64 L 64
>gi|218781559|ref|YP_002432877.1| rhomboid family protein [Desulfatibacillum alkenivorans AK-01]
gi|218762943|gb|ACL05409.1| Rhomboid family protein [Desulfatibacillum alkenivorans AK-01]
Length = 484
Score = 38.2 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 10/53 (18%), Positives = 23/53 (43%)
Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
L D A++ L AY + + ++A + +++ +YP+ A +
Sbjct: 428 FLRQKPDEPGVASALSALGHAYKSRGMDEKAAKCFRILERKYPRSQEAVLARS 480
>gi|254447964|ref|ZP_05061428.1| tetratricopeptide repeat domain protein [gamma proteobacterium
HTCC5015]
gi|198262390|gb|EDY86671.1| tetratricopeptide repeat domain protein [gamma proteobacterium
HTCC5015]
Length = 197
Score = 38.2 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 9/68 (13%), Positives = 22/68 (32%), Gaps = 2/68 (2%)
Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
I +V L S +D + + Y A+ L+ +++ +A +
Sbjct: 9 LKLIALLASVSILASCGGSDSVKARVDHQS--MTPDQAYVYALEMLQAEDYEQALPLLQR 66
Query: 83 CSRDFPFA 90
+ +
Sbjct: 67 ANEKVGRS 74
>gi|166364168|ref|YP_001656441.1| periplasmic protein [Microcystis aeruginosa NIES-843]
gi|166086541|dbj|BAG01249.1| periplasmic protein [Microcystis aeruginosa NIES-843]
Length = 363
Score = 38.2 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 28/243 (11%), Positives = 64/243 (26%), Gaps = 35/243 (14%)
Query: 19 LYKFALTIFFS-IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
+ +F I + + + V+ E+ +A +K N+ +A
Sbjct: 1 MKQFTRLILLVGLLAGGCFSASIAIADNPAGAIVSKDSQVNELLRQARQLVKNGNYGEAI 60
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
+ + + + Q QA P+
Sbjct: 61 AIYERAAALDGNNAKIFSGIGFLQTRQGDYNAAAQAYQKALSLDPSNPDF---------- 110
Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
+ + + A +Y + + +G
Sbjct: 111 ---------------------FHALGYSLANIGDYDNAATAYYYAIQIEPKNVQHYLGLG 149
Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
L++ Y A +Q VLA + ++A + +A + EA + + +R+
Sbjct: 150 VVLLRQKNYAKAGEVYQWVLALDPN---NQQAHEIMGKALIEQNKSSEALDFLQKSLQRF 206
Query: 258 PQG 260
P
Sbjct: 207 PNN 209
>gi|315645575|ref|ZP_07898699.1| TPR repeat-containing protein [Paenibacillus vortex V453]
gi|315279053|gb|EFU42363.1| TPR repeat-containing protein [Paenibacillus vortex V453]
Length = 656
Score = 38.2 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 30/220 (13%), Positives = 60/220 (27%), Gaps = 7/220 (3%)
Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
+ D YE + + + N ++A F + S P + ++S +
Sbjct: 129 KESIKREDDSTVISTYYELGMTYYESGNPAEAANCF-RLSIQQPERAIPMYYYMLSVSLD 187
Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY--- 161
+ L E D Y + S QR + +
Sbjct: 188 LMDHVQEAVGVLQEGIQLADRYEAEADGGYAMFAGSTNYSYGAFLTFQRQVREAYSFRKP 247
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
M+ + + + + ++ + + G AA + +
Sbjct: 248 MADLYVQLGDLGQAEFYLSEAIERYPDSYELYLKRAEVFNRSGNKNAAKADLEWAIEAEP 307
Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
D A L Y A + A E++S + R P
Sbjct: 308 DD---YRAYFDLARIYREDAREELAYELISKLYGRQPDSP 344
>gi|225549799|ref|ZP_03770763.1| FF domain protein [Borrelia burgdorferi 118a]
gi|225369607|gb|EEG99056.1| FF domain protein [Borrelia burgdorferi 118a]
Length = 1119
Score = 38.2 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 23/219 (10%), Positives = 61/219 (27%)
Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
+ + Y + Q + Y+ ++ K + + + E F+Q + P A + ++
Sbjct: 760 KAENAYEKIIKLTNTQEDHYKLGIIRFKLKKYEHSIESFDQTIKLDPKHKKALHNKGIAL 819
Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
+ K ++ + Y + + Q K
Sbjct: 820 MMLNKNKKAIESFEKAIQIDKNYSTAYYQKGIAEEKNGDMQQAFESFKNAYNLDKKPNYA 879
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
+ + + + ++ N E+ I + + E + +
Sbjct: 880 LKAGIVSNNLGNFKQSEKYLNFFNANAKKPNEIAIYNLSIAKFENNKLEESLETINKAID 939
Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
E + + A + SL+ E+ P+
Sbjct: 940 LNPEKSEYLYLKASINLKKGNYQNAISLYSLVIEKNPEN 978
>gi|167950636|ref|ZP_02537710.1| hypothetical protein Epers_31176 [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 191
Score = 38.2 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 10/68 (14%), Positives = 23/68 (33%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
D + + Y++A LK+ + + + F + FP + Y + +
Sbjct: 100 PPDPKLEAAAYQRAFNLLKQGRYPDSIKAFRDFLQQFPGGSYGDNAQYWLGEASYVSRDF 159
Query: 111 QQAASLGE 118
A +
Sbjct: 160 DAAIERVQ 167
>gi|312796782|ref|YP_004029704.1| Tol system periplasmic component YbgF [Burkholderia rhizoxinica HKI
454]
gi|312168557|emb|CBW75560.1| Tol system periplasmic component YbgF [Burkholderia rhizoxinica HKI
454]
Length = 249
Score = 38.2 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 20/121 (16%), Positives = 41/121 (33%), Gaps = 14/121 (11%)
Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
+ K V +Y NSPY A++++ G + +Y A+
Sbjct: 139 FKNGDFKGATSGFKAFVSKYPNSPYQPTAQYWL--------------GNALYAQRDYKAS 184
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
+Q V+ Y A EA+ + + A+ + + +Y A ++
Sbjct: 185 TTVWQGVVTKYPTHPRAPEALLAIANNQLEQGQKVSAKRTLGQVLAQYSGSNAAHAAQSR 244
Query: 270 V 270
+
Sbjct: 245 L 245
Score = 37.1 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 17/112 (15%), Positives = 31/112 (27%)
Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
K Y + + R + V K G++ A F+
Sbjct: 93 QKQQRDYYADLDARLKKFEPQQQTIDGVQGEVQPGETDAFNAALQLFKNGDFKGATSGFK 152
Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
++ Y ++ + A L A A + V + +YP A
Sbjct: 153 AFVSKYPNSPYQPTAQYWLGNALYAQRDYKASTTVWQGVVTKYPTHPRAPEA 204
>gi|159185872|ref|NP_356908.2| hypothetical protein Atu3712 [Agrobacterium tumefaciens str. C58]
gi|159141006|gb|AAK89693.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
Length = 329
Score = 38.2 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 15/72 (20%), Positives = 28/72 (38%)
Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
+ A +G +G++ A F Y + A E + +L + AL + A
Sbjct: 240 KAADASFWLGEAQYSQGKFNEAAKTFLNGHQTYGKSPKAPEMLMKLGMSLAALDNTETAC 299
Query: 248 EVVSLIQERYPQ 259
+ + +RYP
Sbjct: 300 ATLREVPKRYPN 311
>gi|20093095|ref|NP_619170.1| TPR domain-containing protein [Methanosarcina acetivorans C2A]
gi|19918428|gb|AAM07650.1| TPR-domain containing protein [Methanosarcina acetivorans C2A]
Length = 1079
Score = 38.2 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 23/214 (10%), Positives = 45/214 (21%), Gaps = 6/214 (2%)
Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
D Y Y KA K ++ +A + + P + + + +
Sbjct: 500 DDNYTLAWYGKAFALAKTGDYEEALVCYEKVLAAAPDSAEIWYNKGLLLDQLERHQEASD 559
Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
S + Y ++ + N
Sbjct: 560 CYSKALQINPGYSVARFRLNKNTEELYGGLTPNSSEGKKTEVSPKSAIS-GGFWSYLLNY 618
Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA----EHAEE 228
Y + E + + + + + L Y A E
Sbjct: 619 KYTLTEESSDISENFDDLSPEFSYDAAWYGKASAYSKLNMHEDALDAYDTALSINPLRTE 678
Query: 229 AMARLVEAYVALALMDEARE-VVSLIQERYPQGY 261
A A L +EA E ++
Sbjct: 679 AWYEKGSALDKLGRSEEALECYKKALEINPQSSD 712
Score = 36.3 bits (81), Expect = 4.1, Method: Composition-based stats.
Identities = 17/203 (8%), Positives = 42/203 (20%), Gaps = 3/203 (1%)
Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
+ Y + Y K K + A + F++ +A + +
Sbjct: 466 NSEYAKVWYRKGYDSSKFGQYKDAAKSFDKAVNLDDNYTLAWYGKAFALAKTGDYEEALV 525
Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQM---IRDVPYDQRATKLMLQYMSRIVERY 169
E + + + + +++ E
Sbjct: 526 CYEKVLAAAPDSAEIWYNKGLLLDQLERHQEASDCYSKALQINPGYSVARFRLNKNTEEL 585
Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
+ T + A + + S + A
Sbjct: 586 YGGLTPNSSEGKKTEVSPKSAISGGFWSYLLNYKYTLTEESSDISENFDDLSPEFSYDAA 645
Query: 230 MARLVEAYVALALMDEAREVVSL 252
AY L + ++A +
Sbjct: 646 WYGKASAYSKLNMHEDALDAYDT 668
>gi|326942804|gb|AEA18700.1| ABC transporter substrate-binding protein [Bacillus thuringiensis
serovar chinensis CT-43]
Length = 270
Score = 38.2 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 12/70 (17%), Positives = 22/70 (31%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K LT S ++ L + + L E+ EKA L+++ +
Sbjct: 1 MKKLLLTALISTSIFGLAACGGKDKDEKKLVVGASNVPHAEILEKAKPLLEKKGIELEIK 60
Query: 79 YFNQCSRDFP 88
F
Sbjct: 61 KFQDYVLPNK 70
>gi|298373604|ref|ZP_06983593.1| lipoprotein [Bacteroidetes oral taxon 274 str. F0058]
gi|298274656|gb|EFI16208.1| lipoprotein [Bacteroidetes oral taxon 274 str. F0058]
Length = 270
Score = 38.2 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 42/258 (16%), Positives = 79/258 (30%), Gaps = 23/258 (8%)
Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
V LV ++ E + A + + + KA N
Sbjct: 1 MTLVLVLVSCSSYQKLLKNGNN-------EERFTAAKSYFLSKKYQKASTLLNDLVVANA 53
Query: 89 FA-GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147
F+ +++ + A Y A+ EYI +P + Y D
Sbjct: 54 FSGKKMEEAMYLLAESYLGDKDYYSASDSYAEYIKSFPRGDYAKDAKFKTAYCYYLDSPD 113
Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK----- 202
DQ +T + + ++ Y + V+ A Y+ +N+LA K + Y
Sbjct: 114 ARLDQTSTVHAINAFTEYIQIYPDGEKVQEAYNYIEELQNKLAYKSYLEAKLYYNLGLYL 173
Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE------- 255
Y +AI Q L Y + ++ E+ +++A A A + E
Sbjct: 174 GNNYRSAIISAQNTLKQYPETKYREDLSFLILKAKYAEAKHSVSELYSERFSEVIDEYYK 233
Query: 256 ---RYPQGYWARYVETLV 270
+ + E +
Sbjct: 234 YSSEFQNSKNIKEAEHIF 251
>gi|229020223|ref|ZP_04176995.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
cereus AH1273]
gi|229026449|ref|ZP_04182806.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
cereus AH1272]
gi|228734912|gb|EEL85550.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
cereus AH1272]
gi|228741063|gb|EEL91289.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
cereus AH1273]
Length = 270
Score = 38.2 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 12/70 (17%), Positives = 22/70 (31%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K LT S ++ L + + L E+ EKA L+++ +
Sbjct: 1 MKKLLLTALISTSIFGLAACGGKDKDEKKLVVGASNVPHAEILEKAKPLLEKKGIELEIK 60
Query: 79 YFNQCSRDFP 88
F
Sbjct: 61 KFQDYVLPNK 70
>gi|225873098|ref|YP_002754557.1| hypothetical protein ACP_1471 [Acidobacterium capsulatum ATCC
51196]
gi|225793468|gb|ACO33558.1| hypothetical protein ACP_1471 [Acidobacterium capsulatum ATCC
51196]
Length = 343
Score = 38.2 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 17/169 (10%), Positives = 42/169 (24%), Gaps = 15/169 (8%)
Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
+ +P+S + Q+ + + YM +++ +
Sbjct: 160 YQRVYQMFPKSPLTPEAMWRAADIRWQLQKADAATLPSAHTQQPYMRELMDENEMRAVMH 219
Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYV-AAIPRFQLVLANYSDAEHAEEAMARLV- 234
A ++ + + + Y D+ A A+
Sbjct: 220 MFPHTQWAYDAAYALLANQLCGDWQGSEKCPEREAQVYLHYADKYPDSPRAARALYEAAW 279
Query: 235 -------------EAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
A A A + + + +YP+ +A L+
Sbjct: 280 REAAAGDMRETDGNAKRAAEDRKYANGIAARLDAKYPKSSYATRAAALL 328
>gi|260827198|ref|XP_002608552.1| hypothetical protein BRAFLDRAFT_236015 [Branchiostoma floridae]
gi|229293903|gb|EEN64562.1| hypothetical protein BRAFLDRAFT_236015 [Branchiostoma floridae]
Length = 1183
Score = 38.2 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 27/199 (13%), Positives = 66/199 (33%), Gaps = 18/199 (9%)
Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
+A ++F + + A + + G Q+ ++ ++
Sbjct: 548 DRGQIYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKHPDTASDAY 607
Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY-------------- 174
++ + + + Q RD ++R L +++ + Y
Sbjct: 608 SMLALGNVWLQTLHQPQRDKEKEKRHQDRALAMYKQVLRNDPKNLYAANGIGAVLAQKNC 667
Query: 175 VKGARFYVTVGRNQLAAKEVEI---GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231
++ AR R A Y+++ +YV+AI ++ L + + + +
Sbjct: 668 IREARDVFAQVREATADMRDVWLNLAHIYVEQRQYVSAIQMYENCLKKFYKCQDT-DVLL 726
Query: 232 RLVEAYVALALMDEAREVV 250
L AY L E R+++
Sbjct: 727 YLARAYYKLGKHKECRQIL 745
>gi|124024101|ref|YP_001018408.1| hypothetical protein P9303_24101 [Prochlorococcus marinus str. MIT
9303]
gi|123964387|gb|ABM79143.1| Hypothetical protein P9303_24101 [Prochlorococcus marinus str. MIT
9303]
Length = 725
Score = 38.2 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 21/212 (9%), Positives = 61/212 (28%), Gaps = 6/212 (2%)
Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106
+ + Y A +E + +A + + P A +L + +
Sbjct: 200 QIALPLAPQSPELHYNFANALKEEGDVEEAIASYRKAIEVKPDFADAYFALGLVMKEEGD 259
Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY---DQRATKLMLQYMS 163
+ + E + ++ + + I + +
Sbjct: 260 VEEAIASYRKAIEVKPDFADAYFALGLVMKEEGDVEEAIASYRKAIEVKPDFADAYFALG 319
Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
+++ + + + A +G + G+ AI ++ + D
Sbjct: 320 LVMKEEGDVEEAIASYRKAIEVKPDFADAYFALGLVMKEEGDVEEAIASYRKAIEVKPDF 379
Query: 224 EHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
+A L +DEAR++++ +++
Sbjct: 380 ---ADAYLNLGNVLKEEGEIDEARQIITTLRQ 408
>gi|118085018|ref|XP_417145.2| PREDICTED: hypothetical protein [Gallus gallus]
Length = 821
Score = 38.2 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 26/223 (11%), Positives = 56/223 (25%), Gaps = 28/223 (12%)
Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
+D + K ++ KA E++ + R+ A
Sbjct: 480 SDRYNPAALTNKGNTVFANGDYEKAAEFYKEALRND--------------CSCTEALYNL 525
Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
I + + + I D+ ++++ +++
Sbjct: 526 GLTYKKLNRIDEALDCFLKLHAILGNSAQVLHQIADIYEIMEDPNQAIEWLMQLISVVPT 585
Query: 172 SPY--VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY--SDAEHAE 227
P+ K + Y G A Y V + + E+ E
Sbjct: 586 DPHVLTKLGKLYDNEGDKSQAFHYYYESYRYFPSNIEVIEWLGAYCIDTQFCEKAIEYFE 645
Query: 228 EAMARL----------VEAYVALALMDEAREVVSLIQERYPQG 260
A L Y +A E +I +++P+
Sbjct: 646 RAALILPTQVKWQLMVASCYRRSGNYQKALEKYKVIHQKFPEN 688
>gi|75858936|ref|XP_868808.1| hypothetical protein AN9426.2 [Aspergillus nidulans FGSC A4]
gi|40747678|gb|EAA66834.1| hypothetical protein AN9426.2 [Aspergillus nidulans FGSC A4]
gi|259486647|tpe|CBF84668.1| TPA: conserved hypothetical protein [Aspergillus nidulans FGSC A4]
Length = 1262
Score = 38.2 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 26/192 (13%), Positives = 51/192 (26%), Gaps = 12/192 (6%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPF-----AGVARKSLLMSAFVQYSAGKYQQAASL 116
A +L + +A E F Q S+ A + G++++A L
Sbjct: 873 NLAATYLDRGRWKEAEELFVQLVETRKQVVGLEHPDTLTSMHNLASTYRNQGRWKEAEEL 932
Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
+ + ++ L M I K + ++ ++E
Sbjct: 933 LTHILEAWKRVMGSEHPSTLTSMHNLASIFWCQGR---WKEAEELLTEVIETRKRVL--- 986
Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
+ + + + K E + A M L A
Sbjct: 987 -GPEHPDTLSSLHNLASRYLDIGHWKEAEGLLAQVMETRKQVLGPAHPSTLTCMHNLASA 1045
Query: 237 YVALALMDEARE 248
Y ++EA E
Sbjct: 1046 YQNQGRLEEAEE 1057
>gi|317182523|dbj|BAJ60307.1| paralysed flagella protein [Helicobacter pylori F57]
Length = 804
Score = 38.2 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 8/53 (15%), Positives = 15/53 (28%)
Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
NY E + + +A +A I Y +A + +
Sbjct: 263 KNYPTDPSIPEVLYYVAKALDENNNYKQAMHYYKRILLEYKDSRYAPLAQMRL 315
>gi|329925145|ref|ZP_08280088.1| tetratricopeptide repeat protein [Paenibacillus sp. HGF5]
gi|328939978|gb|EGG36311.1| tetratricopeptide repeat protein [Paenibacillus sp. HGF5]
Length = 656
Score = 38.2 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 32/220 (14%), Positives = 62/220 (28%), Gaps = 7/220 (3%)
Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
+ D YE + + + +N ++A YF + S P + ++S +
Sbjct: 129 KESIKREDDSTVISTYYELGMAYYESRNPAEAAHYF-RLSIQKPERAIPMYYYMLSVSLD 187
Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY--- 161
+ L E D Y + S QR + +
Sbjct: 188 LMDHVQEAVGVLQEGIQLADRYEAEADGGYAMFAGSTNYSYGAFQTFQRQAREAYSFRKP 247
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
M+ + + + + ++ + G AA + +
Sbjct: 248 MADLYVQLGDLGQAEHYLSEAIERYPDTYELYLKRAEVLNRSGSKAAAKADLEWAIEAEP 307
Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
D A L Y A +EA E++S + R P
Sbjct: 308 DD---YRAYFDLARIYREDAREEEAFELISKLYARQPDSP 344
>gi|220679038|emb|CAX14409.1| novel protein similar to vertebrate transmembrane and
tetratricopeptide repeat containing 2 (TMTC2) [Danio
rerio]
gi|220679587|emb|CAX12712.1| novel protein similar to vertebrate transmembrane and
tetratricopeptide repeat containing 2 (TMTC2) [Danio
rerio]
Length = 593
Score = 38.2 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 21/229 (9%), Positives = 55/229 (24%), Gaps = 10/229 (4%)
Query: 35 LVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR 94
V S ++ +Y L ++ + +A + + + P +
Sbjct: 341 FVTCAEISDENLKDPHAHKSSVTSCLYNLGKLLHEQGHQEEAISVYKEAIQKMPRQFAPQ 400
Query: 95 KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
M K +A +E + P+ Y + Q + +A
Sbjct: 401 SLYNMMGEAFMRLNKLTEAEHWYKESLRAKPDHIPAHLTYGKLLAMTGQKTEAEKFFLKA 460
Query: 155 TK------LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
+ + + + + + + A
Sbjct: 461 IELDPTKGNCYMHYGQFLLEESRLLEAAEMAEKAAQLDTEEFDVVFSAAHMLRQASLNDA 520
Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR-EVVSLIQER 256
A ++ + + A+ L + EA + +Q +
Sbjct: 521 AEKYYRQAASLRPNYPA---ALMNLGAILHLNGKLQEAEANYLRALQLK 566
>gi|189204221|ref|XP_001938446.1| peroxisomal targeting signal receptor [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187985545|gb|EDU51033.1| peroxisomal targeting signal receptor [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 640
Score = 38.2 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 18/197 (9%), Positives = 43/197 (21%), Gaps = 1/197 (0%)
Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
A+ + ++ +S+ + + E
Sbjct: 224 ALDAEANKAMEAELNEMDRSVEKDAVDFDDFESIWKGIQAETEHARQLVNEENYVEGHMG 283
Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
+ + M + D+ K + V+ N + A
Sbjct: 284 DLDQWENFDGLNTQSVRDPAMGDYLFEDENLFKAVTNPFEEGVKIMENGGNLSLAALAFE 343
Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243
+ R + + P + + EA+ L +Y
Sbjct: 344 AAVQKDPNHIAAWVRLGESQAQNEKETPAIRALEHALKQDPSNLEALMGLAVSYTNEGYE 403
Query: 244 DEAREVVSL-IQERYPQ 259
A + + +YP
Sbjct: 404 STAYRTLERWLATKYPS 420
>gi|220922402|ref|YP_002497704.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
nodulans ORS 2060]
gi|219947009|gb|ACL57401.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
nodulans ORS 2060]
Length = 818
Score = 38.2 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 28/206 (13%), Positives = 60/206 (29%), Gaps = 7/206 (3%)
Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
+ Y + F + + +A ++Q R P + VA ++ + + +
Sbjct: 24 LDATDYYNRGDAFRSKGEYDRAIADYDQALRLDPKSAVAYTHRGLAFYRKGEYDRAIADY 83
Query: 115 SLGEEY-ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
+ +Y G + + K Y++R + Y
Sbjct: 84 DQALRLDPKSAVAYTHRGLAFYRKGEYDRAIADYDQALRLDPKYANIYINRGLAFYRKGE 143
Query: 174 YVKGARFYVTVGR--NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231
Y + Y R + A G + +GEY AI + L + A
Sbjct: 144 YDRAIADYDQALRLDLRDAVVYTNRGDAFRSKGEYDRAIADYDQALRFNPKYPY---AYR 200
Query: 232 RLVEAYVALALMDEA-REVVSLIQER 256
+ + + D A + ++
Sbjct: 201 NRGDTFQSKGEYDRAIADYDQALRLN 226
>gi|39996532|ref|NP_952483.1| TPR domain protein [Geobacter sulfurreducens PCA]
gi|39983413|gb|AAR34806.1| TPR domain protein [Geobacter sulfurreducens PCA]
gi|298505548|gb|ADI84271.1| TPR domain protein [Geobacter sulfurreducens KN400]
Length = 573
Score = 38.2 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 23/197 (11%), Positives = 53/197 (26%), Gaps = 1/197 (0%)
Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
+++++ + + +A F P A R L + + + +
Sbjct: 291 GLIYMESERYDEAIAEFRDILEREPNALQVRFYLATAFEEKEEYDRALEEFGRIPPGSFN 350
Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
Y E+ + + + I + A L+ + Y + + +
Sbjct: 351 YFEAVGHMAFIHKDMGNPEKGIAVLKDAIAAYPSHLELHLYLAGLYESLDHYTEGLAVLK 410
Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243
R + + + A +A+ L Y L +
Sbjct: 411 AVEGDFGGDPRLHFRMGTLYDKMGNKDESIARMKKVLTIAPDDAQALNYLGYTYAELGIK 470
Query: 244 -DEAREVVSLIQERYPQ 259
DEA + + E P
Sbjct: 471 LDEALQYLRKAVELRPN 487
Score = 37.9 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 30/237 (12%), Positives = 66/237 (27%), Gaps = 9/237 (3%)
Query: 23 ALTIFFSIAVCFLVGW-ERQSSRDVYLDSVTDVRYQREVY--EKAVLFLKEQNFSKAYEY 79
LT+F I C G + D+ R +Y +A L L E + A
Sbjct: 9 LLTLFLVIPGCATSGAVGALPVNEASFKPTVDIAGSRALYIFARARLQLLEGDVDGALTL 68
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
N P + ++ A +A Y +++ +
Sbjct: 69 LNGAIEADPGSAYLHTAVAEIYMKTGRAEDALKACENAIRLDPSYRQARLLAGAILASLK 128
Query: 140 SYAQMIRDVPYD---QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196
+ + + + +++ + + + + + +
Sbjct: 129 RDRDAVPHLEKAIELDPSREEAYIHLAVSYLKLFEYEKAVNTLKSLVKVKPESSLGYYYL 188
Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
G+ Y + A ++ + D E+A+ L + L DEA +
Sbjct: 189 GKAYDQMKLQKEAANYYKKAIELKPDF---EQAIIELGIVQEGMGLHDEAVATYKSL 242
>gi|330914837|ref|XP_003296805.1| hypothetical protein PTT_06994 [Pyrenophora teres f. teres 0-1]
gi|311330894|gb|EFQ95100.1| hypothetical protein PTT_06994 [Pyrenophora teres f. teres 0-1]
Length = 639
Score = 38.2 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 17/197 (8%), Positives = 42/197 (21%), Gaps = 1/197 (0%)
Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
A+ + ++ +S+ + + E
Sbjct: 223 ALDAEANKAMEAELNEMDRSVEKDAVDFDDFESIWKGIQAETEHARQLVNEENYVEGHMG 282
Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
+ + M + + K + V+ N + A
Sbjct: 283 DLDQWENFDGLNTHSVRDPAMGDYLFEEDNLFKAVTNPFEEGVKIMENGGNLSLAALAFE 342
Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243
+ R + + P + + EA+ L +Y
Sbjct: 343 AAVQKDPNHIAAWVRLGESQAQNEKETPAIRALEYALKQDPSNLEALMGLAVSYTNEGYE 402
Query: 244 DEAREVVSL-IQERYPQ 259
A + + +YP
Sbjct: 403 STAYRTLERWLATKYPS 419
>gi|291279791|ref|YP_003496626.1| hypothetical protein DEFDS_1409 [Deferribacter desulfuricans SSM1]
gi|290754493|dbj|BAI80870.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1]
Length = 522
Score = 38.2 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 14/99 (14%), Positives = 30/99 (30%)
Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219
+Y + + + + A A + + + A ++ +
Sbjct: 42 KYYVEVGKYLDALEFFETALETTNNRYIVSDALLQKATLFAHYMDKPEEAAKIYEEIFRK 101
Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
+ D E A+ +L Y +A E L + YP
Sbjct: 102 FPDLPQGETALYKLALLYNDFGDEKKALEYFKLYLQYYP 140
>gi|91079140|ref|XP_975466.1| PREDICTED: similar to intraflagellar transport 88 homolog
(Chlamydomonas) [Tribolium castaneum]
Length = 843
Score = 38.2 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 15/201 (7%), Positives = 56/201 (27%), Gaps = 7/201 (3%)
Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
+Y ++ ++ ++++A + F + S + ++ +
Sbjct: 534 EAIYNLGLVLKRQGHYAEALQCFQRFSGSLALLPNVVYQVANLLELKGDSEAAADMYQQL 593
Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDV---PYDQRATKLMLQYMSRIVERYTNSPY 174
+ + Y Q A ++ ++
Sbjct: 594 LGLVPTDAGALQKMGELYDHDGDKQQAHHYHIESFRYYPANLSVINWLGSYYIEMQVVER 653
Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234
+ + + + + + G A+ +Q + + + E + LV
Sbjct: 654 ALVYFEKAALMQPNEPKWNMMVAGCHRRSGNMHRALTLYQEIHRKFPE---NVECLRFLV 710
Query: 235 EAYVALALMDEAREVVSLIQE 255
+ + EA++ + +++
Sbjct: 711 RLCNDMGMR-EAQDYILELKK 730
>gi|37520090|ref|NP_923467.1| transglycosylase [Gloeobacter violaceus PCC 7421]
gi|35211082|dbj|BAC88462.1| gll0521 [Gloeobacter violaceus PCC 7421]
Length = 667
Score = 38.2 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 33/217 (15%), Positives = 62/217 (28%), Gaps = 27/217 (12%)
Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
+ E+A L K + A E + R FP + + + A + + +
Sbjct: 209 PATPENLLERARLQRKLGDKPAARELYELVLRRFPESPLVLDAAFERAELLGAGEAFAAL 268
Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
+ A ++ + R+VERY
Sbjct: 269 -------------EPWERASAERGDEVLWARSQIAARRLDAPEMAIPLYRRLVERYPQ-- 313
Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
+ E+ +RG AA + ++ N+ A +A L
Sbjct: 314 ------------SAKAPNAAWELAAQSAERGNTGAARSYARWLVRNHPADPFAPKAAFWL 361
Query: 234 VEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
+ EAR + +RYP+ Y+A +
Sbjct: 362 GKWAEQAGATAEARSQFREVLKRYPRSYYAWRSAARL 398
>gi|325206379|gb|ADZ01832.1| conserved hypothetical protein [Neisseria meningitidis M04-240196]
Length = 407
Score = 38.2 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 41/279 (14%), Positives = 81/279 (29%), Gaps = 11/279 (3%)
Query: 1 MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV 60
+ VLG+ + A+ L + + F++G + S R
Sbjct: 28 VYIVLGQTMLRINLHAFVLGSLIAVVVWYFLFKFIIGVFNIPEKMQRFGSARKGRKAALA 87
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
KA L E F KA ++ + +L++ A + E
Sbjct: 88 LNKAGLAYFEGRFEKAELEASRVLGNKEAGDNRTLALMLGAHAAGQMENIELRDRYLAEI 147
Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
+ + Y+ + + A M ++R+V + +G
Sbjct: 148 AKLPEKQQLSRYLLLAESALNRRDYEAAEANLHAAAKMNANLTRLVRLQLRYAFDRGDAL 207
Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEY--------VAAIPRFQLVLANYSDAEHAEEAMAR 232
V +L+ + + A + L D+ E
Sbjct: 208 QVLAKTEKLSKAGALGKSEMERYQNWAYRRQLADAADAAALKTCLKRIPDSLKNGELSVS 267
Query: 233 LVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+ E Y L L +A + +++ YPQ +E V+
Sbjct: 268 VAEKYERLGLYADAVKW---VKQHYPQSRRPELLEAFVE 303
>gi|325131986|gb|EGC54685.1| hypothetical protein NMBM6190_1290 [Neisseria meningitidis M6190]
Length = 405
Score = 38.2 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 41/279 (14%), Positives = 81/279 (29%), Gaps = 11/279 (3%)
Query: 1 MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV 60
+ VLG+ + A+ L + + F++G + S R
Sbjct: 28 VYIVLGQTMLRINLHAFVLGSLIAVVVWYFLFKFIIGVFNIPEKMQRFGSARKGRKAALA 87
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
KA L E F KA ++ + +L++ A + E
Sbjct: 88 LNKAGLAYFEGRFEKAELEASRVLGNKEAGDNRTLALMLGAHAAGQMENIELRDRYLAEI 147
Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
+ + Y+ + + A M ++R+V + +G
Sbjct: 148 AKLPEKQQLSRYLLLAESALNRRDYEVSEANLHAAAKMNANLTRLVRLQLRYAFDRGDAL 207
Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEY--------VAAIPRFQLVLANYSDAEHAEEAMAR 232
V +L+ + + A + L D+ E
Sbjct: 208 QVLAKTEKLSKAGALGKSEMERYQNWAYRRQLADAADAAALKTCLKRIPDSLKNGELSVS 267
Query: 233 LVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+ E Y L L +A + +++ YPQ +E V+
Sbjct: 268 VAEKYERLGLYADAVKW---VKQHYPQSRRPELLEAFVE 303
>gi|291567438|dbj|BAI89710.1| TPR domain protein [Arthrospira platensis NIES-39]
Length = 260
Score = 38.2 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 28/220 (12%), Positives = 77/220 (35%), Gaps = 9/220 (4%)
Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL---LMSAFVQYSAGKYQQA 113
+++++A++++ +++ A + Q + +P +A K+L A K+ +
Sbjct: 9 ALQLHQQAIIYINNRDWDAAIKAAEQALKLYPDLAIACKTLGIAWQCKGELAEAEKWYKQ 68
Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
A + + + + Y + + ++++ ++
Sbjct: 69 ALKIQPHFAEVYSNLGSLYAKQSQWEPAIIAYQTALKINPNLAGAYRNLAKVWTELEDTD 128
Query: 174 YVKGARFYVTVGRNQL--AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231
++ + A +++G LK ++ AI ++ + Y D EA
Sbjct: 129 NFIKCQYKALKLEPEKGSADDYIKLGNLLLKSRQFTKAIACYRQAIKLYPDTS---EAYH 185
Query: 232 RLVEAYVALALMDEAREVV-SLIQERYPQGYWARYVETLV 270
L E AL +A ++ + R +E ++
Sbjct: 186 NLGEVLKALKRPKQAILYYQKALEVNHQSTMTYRSLEKIL 225
>gi|260826858|ref|XP_002608382.1| hypothetical protein BRAFLDRAFT_95383 [Branchiostoma floridae]
gi|229293733|gb|EEN64392.1| hypothetical protein BRAFLDRAFT_95383 [Branchiostoma floridae]
Length = 1441
Score = 38.2 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 23/191 (12%), Positives = 54/191 (28%), Gaps = 8/191 (4%)
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
Y+ A+ + ++ A E + + L + G + A E+
Sbjct: 835 YKAAIGYFEQ-----ALEMYRAIFGQNASSEDLVSLLSIMGTTWDDMGATETAIRYHEKT 889
Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
+ D + + S + + Q K ++Y ++
Sbjct: 890 LEMERTLYGQDTNHADIVDSLSNIALLWN-KQGNYKKAVRYFEEVLNMQKALSKDGSEEQ 948
Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
+ + L + G+Y+ +I + + + ++ L A+ L
Sbjct: 949 AIATTLHNLGIICHDGGQYHKAISYLKQSIE--KQRVVYGPNHSITTMSLRTLARAHNDL 1006
Query: 241 ALMDEAREVVS 251
L D A
Sbjct: 1007 GLHDSAVSYYE 1017
>gi|156386822|ref|XP_001634110.1| predicted protein [Nematostella vectensis]
gi|156221189|gb|EDO42047.1| predicted protein [Nematostella vectensis]
Length = 1194
Score = 38.2 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 20/214 (9%), Positives = 52/214 (24%), Gaps = 16/214 (7%)
Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS-----AFVQYSAG 108
+ + K +A E + Q + G +
Sbjct: 9 NEQAQVYFRKGNELYDLGKHREALEQYQQALQVCISTGNESDQAGVRQNIGVLQESLGNY 68
Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
+ + + ++N + + + + + + LQ R V +
Sbjct: 69 EEAMKYYQQALQVFESTGNENNQAIVRQNIGVVQRRLGNYEEAMKYYQQALQVFERTVVQ 128
Query: 169 YTNSPYVKGARFYVTVGR-NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
Y + ++Y + + E G ++ ++ + Y A
Sbjct: 129 RRLGNYEEAMKYYQQALQVFERTGNESNQAGVRQNIGVVQESLGNYEEAMKYYQQALQVF 188
Query: 228 E----------AMARLVEAYVALALMDEAREVVS 251
E + +L +EA +
Sbjct: 189 ERTGNESKQAGVRQNIGVVQESLGNYEEAMKYYQ 222
>gi|51246265|ref|YP_066149.1| hypothetical protein DP2413 [Desulfotalea psychrophila LSv54]
gi|50877302|emb|CAG37142.1| hypothetical protein DP2413 [Desulfotalea psychrophila LSv54]
Length = 346
Score = 38.2 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 21/204 (10%), Positives = 55/204 (26%), Gaps = 2/204 (0%)
Query: 67 FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126
+++ A RK++ + Y + ++ ++ E
Sbjct: 143 AIQQARLRDAKRKAANAKNKADIRREQRKNIAQTGKSGYIKAETKKVMKPVKDSSFALRE 202
Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
+ A P R ++ +
Sbjct: 203 PSKRQQKVTSQQKTVAPDKVIAPTGAILIAKANTIFKE--NRLADAYTMFEEISQSNYDS 260
Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
A +G + +Y A+ R+Q ++ Y D + ++ R ++ + +
Sbjct: 261 KITAEALYMMGECRFYQKDYEDAVVRYQDLIRQYPDTPLSASSLLRQGNSFAKSLDKETS 320
Query: 247 REVVSLIQERYPQGYWARYVETLV 270
+ + + E+YP A +
Sbjct: 321 KMIYKKVIEKYPDSSQAIAATKEL 344
>gi|315187155|gb|EFU20912.1| hypothetical protein SpithDRAFT_0520 [Spirochaeta thermophila DSM
6578]
Length = 305
Score = 38.2 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 24/232 (10%), Positives = 61/232 (26%), Gaps = 13/232 (5%)
Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-------FAGVARKSLLMSAFVQY 105
++ + YE LF +E F+ A + + F +A + +
Sbjct: 62 EITFPEAEYELGRLFFREGEFTLAERHLLKALAQRQYLAVEASFYPIAYTLAEVYLEERK 121
Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
+ + Y +N + + + R + +
Sbjct: 122 YHEFEETLFTYILSEDESYIGERNRKNREVWTTTLKEKGLDRLLVLYRCPENASYRAHLL 181
Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF------QLVLAN 219
+ + + + +++ + + +
Sbjct: 182 LSEFYGENGRMDKALEHATVGVMMVVTTLVDTIREEDYLYIFSSMEALWRKIQQEDLFLS 241
Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
Y + + L A LA +EA + S + R P+G W + ++
Sbjct: 242 YLEDREIYRLLYWLANALYGLAHREEAVKWWSFVAARAPEGRWKYLAFSQLR 293
>gi|149922944|ref|ZP_01911364.1| transmembrane sensor, putative [Plesiocystis pacifica SIR-1]
gi|149816195|gb|EDM75702.1| transmembrane sensor, putative [Plesiocystis pacifica SIR-1]
Length = 452
Score = 38.2 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 33/74 (44%)
Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
G+ + G + A F+ L H +A+ RL+ +Y A + AR+V + ER
Sbjct: 377 GKMAAEGGHWPKAATWFEAYLDEQPKGTHRSDALGRLMASYQAAGKQERARDVAADYLER 436
Query: 257 YPQGYWARYVETLV 270
P+G A L+
Sbjct: 437 DPKGAHAAKARELL 450
>gi|124024107|ref|YP_001018414.1| hypothetical protein P9303_24161 [Prochlorococcus marinus str. MIT
9303]
gi|123964393|gb|ABM79149.1| Hypothetical protein P9303_24161 [Prochlorococcus marinus str. MIT
9303]
Length = 661
Score = 38.2 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 24/195 (12%), Positives = 48/195 (24%), Gaps = 6/195 (3%)
Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
Y L + ++ + +A + + + A L ++F + E
Sbjct: 114 YYNLGKLLVADKQYGRAIPVLKEALKRDQKSFSAWNLLSKASFHDEDFAGAVDSGQRACE 173
Query: 120 YITQYPESKNVDYVYYL---VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
PE VY+ + + M I+ +
Sbjct: 174 LSPDNPEVFFDLGVYFNALKQLDKAVNAYQKAIVFKPDYLEAWVNMGNILTKQGKLEGAI 233
Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
V L +G ++ AI ++ + D + L A
Sbjct: 234 RCFQKVIDLNPDLVDAYFNMGNILKDHTKFEEAIGSYRKAIDLKPDF---ADVYFALGMA 290
Query: 237 YVALALMDEAREVVS 251
L +D A
Sbjct: 291 LKELGDIDSASAAFE 305
>gi|148658680|ref|YP_001278885.1| protein kinase [Roseiflexus sp. RS-1]
gi|148570790|gb|ABQ92935.1| protein kinase [Roseiflexus sp. RS-1]
Length = 545
Score = 38.2 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 16/206 (7%), Positives = 53/206 (25%), Gaps = 9/206 (4%)
Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
+ E+ + + + +A F + + + + +
Sbjct: 322 DQRDEAEQWKERGLAHMNMSEYKEAIRCFKRAVELDQDQPDSWDLMARCLLKLWMYHEAL 381
Query: 112 QA------ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
Q+ ++ ++ + + + + + +
Sbjct: 382 QSVEEGLRRAVSRTEFGNLYGARGEIFTAMQKPLEALTAYDKALSYMPSMPALWRGKGAL 441
Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
++ ++ + ++G RG + AA+ + L +
Sbjct: 442 LQHIGDAQSAQECFEKAIALDPSDTIAHRQLGDLLASRGRWKAAVDSYAEALKLDPRSV- 500
Query: 226 AEEAMARLVEAYVALALMDEAREVVS 251
E + E+ + L +EAR
Sbjct: 501 --EGWVKYGESLLRLGRKEEARIAFE 524
>gi|320537737|ref|ZP_08037662.1| tetratricopeptide repeat protein [Treponema phagedenis F0421]
gi|320145416|gb|EFW37107.1| tetratricopeptide repeat protein [Treponema phagedenis F0421]
Length = 223
Score = 38.2 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 22/196 (11%), Positives = 56/196 (28%), Gaps = 4/196 (2%)
Query: 71 QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
+F A F A + ++ ++ + + + E++++ ++
Sbjct: 15 NDFLAAKRRFILIGFLAIIAIIVGVTVYLTITSKMHRTAATKVEEIRNEWVSEKEKNSEN 74
Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER---YTNSPYVKGARFYVTVGRN 187
+ I + A ++ I + N+ +
Sbjct: 75 TGTKENEIIQKLGKIASSNKNSYAGTRAYTTIAEIYFSRKDWENAMKNYELGAESSKKTY 134
Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
+ G+ A+ + + AM + AL+ +EA
Sbjct: 135 LSGVNYFNAAVCADESGKQDLALDYYNKSTGA-PEFPLQPRAMFNIGRLQEALSHTEEAI 193
Query: 248 EVVSLIQERYPQGYWA 263
E + + E++P WA
Sbjct: 194 EAYNKLLEKFPNDNWA 209
>gi|269213584|ref|ZP_05982322.2| type IV pilus biogenesis/stability protein PilW [Neisseria cinerea
ATCC 14685]
gi|269146034|gb|EEZ72452.1| type IV pilus biogenesis/stability protein PilW [Neisseria cinerea
ATCC 14685]
Length = 254
Score = 38.2 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 24/252 (9%), Positives = 62/252 (24%), Gaps = 9/252 (3%)
Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
+ F +A L + + ++ A+ +++ Q++ +A
Sbjct: 1 MMPFHISKKLFFLAALALSACSTSYQPSSAEKANQVSNIKTQL---AMEYMRGQDYRQAT 57
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
+ +A + Q + L + N +Y ++L
Sbjct: 58 ASIEDALKTDSKNELAWLVRAE-IYQYLKVNDKAQESFLHALSLKPDNAEINNNYGWFLC 116
Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
G +D+ +G + A + +
Sbjct: 117 GTLNRPAEAMPHFDKALADPTYPTPFVANLNKGICSAKQGQLGLAEAYLERSLAAQPQFP 176
Query: 198 ---RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV--EAYVALALMDEAREVVSL 252
+ + + Y +A L+ + +L A E +
Sbjct: 177 PAFKELARTKMLAGQLNDADYYFKKYQSKVEVLQADDLLLGWKIAKSLGNSQAAYEYEAQ 236
Query: 253 IQERYPQGYWAR 264
+Q +P +
Sbjct: 237 LQANFPYSEELQ 248
>gi|144897901|emb|CAM74765.1| protein conserved in bacteria [Magnetospirillum gryphiswaldense
MSR-1]
Length = 323
Score = 38.2 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 12/93 (12%), Positives = 32/93 (34%)
Query: 43 SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102
+ + S + + +Y+ A L+ +++ A + F +A +
Sbjct: 184 KKPAPVVSSAAPKDAQGLYDMAYDALQGGDYATAEKGFQDFLAQHGSHQLAGNAQYWLGD 243
Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
+ Y + +A E ++P+ + Y
Sbjct: 244 IAYVRKDFNTSAVTFLEGYKKFPKHSKAADMIY 276
>gi|154252571|ref|YP_001413395.1| Tol-Pal system YbgF [Parvibaculum lavamentivorans DS-1]
gi|154156521|gb|ABS63738.1| Tol-Pal system YbgF [Parvibaculum lavamentivorans DS-1]
Length = 301
Score = 38.2 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 19/81 (23%), Positives = 31/81 (38%), Gaps = 1/81 (1%)
Query: 180 FYVTVGRNQLAAKEVEI-GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
F +++LA G Y Y A F Y+ + A +++ +L +
Sbjct: 203 FLQLHPKHELAGNAQYWLGETYYAENNYKQAGDAFLNGYTTYASSSKAPDSLLKLGMSLS 262
Query: 239 ALALMDEAREVVSLIQERYPQ 259
AL D A V + R+PQ
Sbjct: 263 ALGNTDAACTVWGELGSRFPQ 283
>gi|88602878|ref|YP_503056.1| tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1]
gi|88188340|gb|ABD41337.1| Tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1]
Length = 240
Score = 38.2 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 25/243 (10%), Positives = 67/243 (27%), Gaps = 20/243 (8%)
Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
+ + + + L G T+ ++ E+ F K+ +++
Sbjct: 4 FMKFVSTVVLALSVLMLILLCGC-----------LGTEGWSAQDWIEQGNRFAKDGLYTE 52
Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI------TQYPESKN 129
A + ++ R P ++ + Q S
Sbjct: 53 AVDAYSHSIRLDPINPKVWTYRGIALQHLGRQQEAMNDFDEAIRLNPDESGAWQGKASSY 112
Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
++ Y + + A+ ++ Q + + R +
Sbjct: 113 IESGQYKLAIKSAERSLELAGPQDKKENSWLLIGFAYNRLEQYEEALQRFDKAIEIDPKR 172
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
K G Y+ + ++++ D+ + E ++AL ++EA E
Sbjct: 173 VDLWQHKAYTLTKLGRYMEVLKCYEVMTGLEPDSPELWN---KKGEIHLALGQINEANEA 229
Query: 250 VSL 252
++
Sbjct: 230 FAM 232
>gi|34540729|ref|NP_905208.1| TPR domain-containing protein [Porphyromonas gingivalis W83]
gi|34397043|gb|AAQ66107.1| TPR domain protein [Porphyromonas gingivalis W83]
Length = 750
Score = 38.2 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 31/228 (13%), Positives = 65/228 (28%), Gaps = 7/228 (3%)
Query: 33 CFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV 92
C++VG ++ +D D ++ Y + V + K+ ++ +A + F++
Sbjct: 35 CYIVGSYEEAIKDYSKAIELDGKFIPAYYNRGVAYFKKGSYEEAIKDFSKAIELDDKFVH 94
Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQY---PESKNVDYVYYLVGMSYAQMIRDVP 149
A + + K + S E +Y + V Y +
Sbjct: 95 AYHGRGNAYSKKGWYKKAIKDYSQAIELDDKYILGYNGRGVAYCEKGSYEEAIKDYSKAI 154
Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
+ + A G Y ++G Y A
Sbjct: 155 ELDDKYAPAYHGRGNAYSKKGWYKKAIKDYSQAIELDGKFAHAYYGRGNAYCEKGSYEEA 214
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA-REVVSLIQER 256
I + + D ++A A AY +A ++ I+
Sbjct: 215 IKDYSQAIEL--DDKYAP-AYHGRGNAYSKKGWYKKAIKDYSQAIELD 259
>gi|90426218|ref|YP_534588.1| hypothetical protein RPC_4747 [Rhodopseudomonas palustris BisB18]
gi|90108232|gb|ABD90269.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB18]
Length = 323
Score = 38.2 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 34/105 (32%), Gaps = 5/105 (4%)
Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQL-----AAKEVEIGRYYLKRGEYVAAIPRF 213
+ Y +N A + +G + +R Y A F
Sbjct: 200 KDEFDLGIGYMQRKDYALAEETMRNFVKNHPGDPLTADSQYWLGESFFQRQLYRDAAEAF 259
Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
V Y + A +A+ RL ++ AL + A + + +YP
Sbjct: 260 LAVTTKYDTSAKAPDALLRLGQSLAALKEKEAACAALGEVTRKYP 304
>gi|291167111|gb|EFE29157.1| antioxidant, AhpC/TSA family [Filifactor alocis ATCC 35896]
Length = 300
Score = 38.2 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 7/58 (12%), Positives = 17/58 (29%)
Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
+ K L + + L + S D + ++ +A ++F
Sbjct: 3 MMKKTILIMTVLTMITSLSACGKSDSSSNATDQPASNQQEQAANTEAFPKFTAKDFDG 60
>gi|145553078|ref|XP_001462214.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124430052|emb|CAK94841.1| unnamed protein product [Paramecium tetraurelia]
Length = 434
Score = 38.2 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 23/210 (10%), Positives = 56/210 (26%), Gaps = 6/210 (2%)
Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL-MSAFVQYSAGKY 110
++++ + K QN+ + E F + + A + + +
Sbjct: 180 NQNDSSSVIFDQGMKEFKLQNYKLSIEQFEKAIKLKQNFEQAWIYKILSYGEQKQNKKAI 239
Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
+ + + + + Q K + V +
Sbjct: 240 DECVRAKQYCFNSSNLCFLHGILLQENKQYKEALEQFDVVIQNNNKNIEALYQAGVSSFE 299
Query: 171 NSPYVK-GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
Y K F + + + GR L+ + AI F+ + +A
Sbjct: 300 LELYPKAQEYFQKIILQTHNEKAYLMQGRIALEEAQQENAIFCFEQCIDINQKT----QA 355
Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQ 259
L Y+ L + +A+ + +
Sbjct: 356 HFYLALIYINLNEIKKAQSYNDIYCRNFQD 385
>gi|116074411|ref|ZP_01471673.1| hypothetical protein RS9916_38212 [Synechococcus sp. RS9916]
gi|116069716|gb|EAU75468.1| hypothetical protein RS9916_38212 [Synechococcus sp. RS9916]
Length = 260
Score = 38.2 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 26/212 (12%), Positives = 56/212 (26%), Gaps = 9/212 (4%)
Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
+ ++++A+ + + ++A +N+ P A + V A + S
Sbjct: 29 DQALFDQALQASRNGDIAEALPLWNRYLDAHPGDAAALSNRGNVRLVLGDAEGAIRDQSR 88
Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY---DQRATKLMLQYMSRIVERYTNSP 173
E + + D + A L + + +
Sbjct: 89 SLELSPDEIDPHLNRGTAEEALQQWDAAAADYDWILERDPAEASALYNLGNVRGSQQDWT 148
Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
+ + R A + ++ A + ++ Y +A A L
Sbjct: 149 MAADLYNHAALARPGFAMARSSEAMARYQLEQFEQAERELRNLIRRYPMF---ADARAGL 205
Query: 234 VEAYVALALMDEARE---VVSLIQERYPQGYW 262
EA S + RY Q W
Sbjct: 206 SALLWKQGQGGEAESHWAAASGLDPRYRQADW 237
>gi|237744580|ref|ZP_04575061.1| conserved hypothetical protein [Fusobacterium sp. 7_1]
gi|229431809|gb|EEO42021.1| conserved hypothetical protein [Fusobacterium sp. 7_1]
Length = 289
Score = 38.2 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 16/215 (7%), Positives = 55/215 (25%), Gaps = 2/215 (0%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K L + +++ L + ++ + + + + +E F++ +
Sbjct: 1 MKKIGLIVVLTLSFLLLTNCNKDEKKETVAVKYENKNPKIKFSDDTYKLFEE--FAENKK 58
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+ + + + K + + I + +
Sbjct: 59 EIMEKLKTLNKDEANKLYEQYVEDNENILYKIVEVTEKFLDSIYYGSAEEQFTEKDWNDT 118
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
+D + ++ + + + Y+ +
Sbjct: 119 NKILNKYDLELWDIGEGMVTIRELPHLYYDVFKDYVTDDYKEYLKIWAKDSEELYQADAG 178
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
+ E I R++ L Y ++ + A L
Sbjct: 179 LSISFEELGNRIARWENFLNKYPNSTLKPKVTALL 213
>gi|291287653|ref|YP_003504469.1| Tetratricopeptide TPR_2 repeat protein [Denitrovibrio acetiphilus
DSM 12809]
gi|290884813|gb|ADD68513.1| Tetratricopeptide TPR_2 repeat protein [Denitrovibrio acetiphilus
DSM 12809]
Length = 938
Score = 38.2 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 34/237 (14%), Positives = 75/237 (31%), Gaps = 7/237 (2%)
Query: 35 LVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR 94
L+G ++S D ++ + AV+ ++ ++A +Y Q +D A +
Sbjct: 106 LMGNIKKSEEAFRRSVAEDPTFREALMNLAVVLIQTDKLAEAEKYVEQLLKDDNSAKLLV 165
Query: 95 KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
+ +A Q ++ N Y VG + + +
Sbjct: 166 NMANIHLKRGETAKAAQYFREAMDKGDNSKYVLSNYAYFLMSVGEYKDGIQIIEKLEYKD 225
Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
+ + + + + R + A Y G++ I
Sbjct: 226 YTDYYNLAKAYLNINMDKAALDSVERALRINRTEDALSL--AADAYHALGDFYNEIKSLD 283
Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ-GYWARYVETLV 270
++ D +E M RL AY M +++ + + E YP+ + R ++
Sbjct: 284 FLIGINPD----KEYMFRLARAYYLNGKMTQSQNEIRSLIETYPEIHKYYRLYYEVL 336
>gi|91202534|emb|CAJ72173.1| hypothetical protein kustd1428 [Candidatus Kuenenia
stuttgartiensis]
Length = 611
Score = 38.2 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 10/64 (15%), Positives = 21/64 (32%)
Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
A +Q Y + + +A L Y L A + ++ ++Y +
Sbjct: 226 DYYKDKAAQIYQRAQIKYPNDKMVVKAYYELGNYYYDLGFNFLALQEYQVVVKKYITSLF 285
Query: 263 ARYV 266
A+
Sbjct: 286 AKDA 289
Score = 38.2 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 30/75 (40%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
E+G YY G A+ +Q+V+ Y + A++A+ ++ + Y L + A
Sbjct: 253 YYELGNYYYDLGFNFLALQEYQVVVKKYITSLFAKDALFKIGDCYYRLNDPESAIRAYFQ 312
Query: 253 IQERYPQGYWARYVE 267
YP+
Sbjct: 313 FIYGYPKDPLIADAF 327
Score = 37.5 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 33/215 (15%), Positives = 67/215 (31%), Gaps = 22/215 (10%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
D + + + +A + + + +P A +A K+ L A KY
Sbjct: 318 PKDPLIADAFMGIGDSLMMQGFYVRAKDTYERVLNGYPEAEIAAKAQLNIAKALAKMEKY 377
Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
++A E Y + G+ +I + + + + +
Sbjct: 378 REAIRALMEARELYNSLQV--------GVEIEYLIGKCLFSLKEYEDAKTVLGNFLANAG 429
Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
N Y + A F + G + YV A F+ L Y ++ + M
Sbjct: 430 NERYAEDASFLL--------------GECFYNNENYVEAFQVFKRALETYPNSSNVPRGM 475
Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
L ++ A+ D A + + +P +A
Sbjct: 476 YFLGKSLRAMHFYDSAIKTFREGIQFWPTNEYADK 510
>gi|221217537|ref|ZP_03589007.1| surface-located membrane protein 1 [Borrelia burgdorferi 72a]
gi|13324584|gb|AAK18795.1|AF305603_1 LMP1 [Borrelia burgdorferi]
gi|221192600|gb|EEE18817.1| surface-located membrane protein 1 [Borrelia burgdorferi 72a]
Length = 1011
Score = 38.2 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 23/219 (10%), Positives = 61/219 (27%)
Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
+ + Y + Q + Y+ ++ K + + + E F+Q + P A + ++
Sbjct: 652 KAENAYEKIIKLTNTQEDHYKLGIIRFKLKKYEHSIESFDQTIKLDPKHKKALHNKGIAL 711
Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
+ K ++ + Y + + Q K
Sbjct: 712 MMLNKNKKAIESFEKAIQIDKNYSTAYYQKGIAEEKNGDMQQAFESFKNAYNLDKKPNYA 771
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
+ + + + ++ N E+ I + + E + +
Sbjct: 772 LKAGIVSNNLGNFKQSEKYLNFFNANAKKPNEIAIYNLSIAKFENNKLEESLETINKAID 831
Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
E + + A + SL+ E+ P+
Sbjct: 832 LNPEKSEYLYLKASINLKKGNYQNAISLYSLVIEKNPEN 870
>gi|329120379|ref|ZP_08249046.1| type IV pilus biogenesis/stability protein [Neisseria bacilliformis
ATCC BAA-1200]
gi|327462334|gb|EGF08660.1| type IV pilus biogenesis/stability protein [Neisseria bacilliformis
ATCC BAA-1200]
Length = 252
Score = 38.2 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 21/241 (8%), Positives = 59/241 (24%), Gaps = 7/241 (2%)
Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
++ C L S + T+ + + + A ++ +++ A + +
Sbjct: 8 ALLACVLSACGGTSVKQPSRQERTEEISRIKT-QLAAEYMNAKDYRLAVTTIEEALQADR 66
Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
+A + + A+ + N +Y ++L +
Sbjct: 67 KNSIA-WLMRAQIYQFLKVNDKADASFHEALRLQPDSAEINNNYGWFLCSVMNNPNAAIP 125
Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVK---GARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
+D+ + A + + + +
Sbjct: 126 YFDKALSDPTYPAPQVAYMNKGICSAKMGQYSLAQAYLERGIAAAPDFMPLRKELARTKM 185
Query: 206 YVAAIPRFQLVLANYSDAEHAEEA--MARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
I + Y +A + + A A E + ++ YP
Sbjct: 186 LAGQIKEADKLFRQYQSQVDNLDAGDLLLGWQLARATGSSQAAYEYEAQLRANYPYSEEL 245
Query: 264 R 264
+
Sbjct: 246 Q 246
>gi|188995741|ref|YP_001929993.1| TPR domain protein [Porphyromonas gingivalis ATCC 33277]
gi|188595421|dbj|BAG34396.1| TPR domain protein [Porphyromonas gingivalis ATCC 33277]
Length = 1160
Score = 38.2 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 13/68 (19%), Positives = 28/68 (41%)
Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
+ + ++ + ++ +L Y + E + + RL Y + EA LI +
Sbjct: 612 AVFNERMEKFDESADTYETLLRRYPNYEKKMDVLYRLFMLYTRMNNKPEAERCRVLILQY 671
Query: 257 YPQGYWAR 264
YP+ A+
Sbjct: 672 YPEDNLAK 679
>gi|218247206|ref|YP_002372577.1| lytic transglycosylase catalytic subunit [Cyanothece sp. PCC 8801]
gi|218167684|gb|ACK66421.1| Lytic transglycosylase catalytic [Cyanothece sp. PCC 8801]
Length = 730
Score = 38.2 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 26/230 (11%), Positives = 68/230 (29%), Gaps = 5/230 (2%)
Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
RD + + A + +++ KA + + +
Sbjct: 216 ATNPMRDRLVKDYASQLTPEDWQAIADGYWAVEDYYKAALAYQKAPSTAQNLYRIGRGQQ 275
Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY--LVGMSYAQMIRDVPYDQRATK 156
+ A L + + + + + + + + +
Sbjct: 276 LQPNGNNKATVQAAYQKLLVAFPQAPEAALALQRLAQLSQPETAISYLDQLINKFPEQAG 335
Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ---LAAKEVEIGRYYLKRGEYVAAIPRF 213
L + ++++ R + + A I + +RG+ + A
Sbjct: 336 DALVKKAELLDKLNRQGEATKIRQTLLSKYAKSDATAEYRWLIAQKAAERGDALKAWTWA 395
Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
Q ++ N ++ A +A + + L ++EA + R+PQ Y+A
Sbjct: 396 QPIVVNNPESPLAPKAGFWVGKWAQQLGRLEEAETAFEYVVTRHPQSYYA 445
>gi|228955252|ref|ZP_04117260.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
thuringiensis serovar kurstaki str. T03a001]
gi|229072475|ref|ZP_04205677.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
cereus F65185]
gi|228710451|gb|EEL62424.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
cereus F65185]
gi|228804385|gb|EEM50996.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
thuringiensis serovar kurstaki str. T03a001]
Length = 270
Score = 38.2 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 20/202 (9%), Positives = 45/202 (22%), Gaps = 3/202 (1%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K LT S ++ L + + L E+ EKA L+++ +
Sbjct: 1 MKKLLLTALISTSIFGLAACGGKDKDEKKLVVGASNVPHAEILEKAKPLLEKKGIELEVK 60
Query: 79 YFNQCSRDFP---FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
F + +++ + + + + + Y
Sbjct: 61 KFQDYVLPNKSLADKELDANYFQHIPYLEKEIKDKKYDFEIAGKIHIEPIGVYSQKYKSL 120
Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
A +I L + I++ V + L K
Sbjct: 121 KELPDGATIIMSNSVTDHGRGLAILQKEGILKIKDGVDPVSATPKDIADNPKHLKFKTDI 180
Query: 196 IGRYYLKRGEYVAAIPRFQLVL 217
+
Sbjct: 181 EPGLLPQVYNNKEGDAVLINSN 202
>gi|255944463|ref|XP_002562999.1| Pc20g04550 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211587734|emb|CAP85784.1| Pc20g04550 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 748
Score = 38.2 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 28/54 (51%), Gaps = 5/54 (9%)
Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG-----YWARYVETLVK 271
+E +E+A+ R +A L ++E+ + ++ E+YP +AR LV+
Sbjct: 268 SEMSEKALFRKAQALYQLRRLNESCQTHEILAEKYPDNTLAAHEYARASARLVE 321
>gi|193211913|ref|YP_001997866.1| hypothetical protein Cpar_0239 [Chlorobaculum parvum NCIB 8327]
gi|193085390|gb|ACF10666.1| conserved hypothetical protein [Chlorobaculum parvum NCIB 8327]
Length = 692
Score = 38.2 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 15/63 (23%), Positives = 28/63 (44%), Gaps = 10/63 (15%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
+ F LT+ F+ L ++Q S +YE+A +N+S+A +Y
Sbjct: 6 FSFRLTLLFAFFTLSLAACDQQESEPK----------PSALYEEAQRLEGRKNYSEALDY 55
Query: 80 FNQ 82
+N+
Sbjct: 56 YNR 58
>gi|168041576|ref|XP_001773267.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675462|gb|EDQ61957.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1802
Score = 38.2 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 15/78 (19%), Positives = 29/78 (37%), Gaps = 1/78 (1%)
Query: 8 AICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLF 67
C++ + ++ KF+ + F IA V R S + ++Y +A+
Sbjct: 24 GCCLYLFFCFRFLKFS-VLQFHIAAINDVDTSRDFSEPLAPTKEAQESRLTQMYGEALSH 82
Query: 68 LKEQNFSKAYEYFNQCSR 85
L+ KA F +
Sbjct: 83 LQHGQIEKAQSLFQSILQ 100
>gi|118594346|ref|ZP_01551693.1| TPR repeat [Methylophilales bacterium HTCC2181]
gi|118440124|gb|EAV46751.1| TPR repeat [Methylophilales bacterium HTCC2181]
Length = 293
Score = 38.2 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 18/104 (17%), Positives = 40/104 (38%)
Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
+Y + ++A + +G Y AAI + V+ + D+
Sbjct: 183 KYQEAFIAFDRFISAYPKAEKIAEAKYNLGYAQFALKNYNAAIKTYSKVIELHVDSAIVP 242
Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
E+M + + LA + A++ + + +R+P +T +K
Sbjct: 243 ESMYGIANCEIQLAKIGNAKKTLRDLMQRFPNAEIIPKAKTRLK 286
>gi|313676465|ref|YP_004054461.1| hypothetical protein Ftrac_2375 [Marivirga tractuosa DSM 4126]
gi|312943163|gb|ADR22353.1| hypothetical protein Ftrac_2375 [Marivirga tractuosa DSM 4126]
Length = 603
Score = 38.2 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 20/230 (8%), Positives = 68/230 (29%), Gaps = 3/230 (1%)
Query: 43 SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102
+ + + + +++ ++ + Q + + ++ L +A
Sbjct: 367 NEIINYPNAEPNLIAKAKLNLGDIYIITDEPWESVLLYYQVEKSHKNENLGEEAKLKNAK 426
Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
+ + G+++ A + D + + + ++ RA +
Sbjct: 427 LSFYRGEFELAQEHLDILKNATRREIANDAMDLSILIKNNTILDSTQKALRAY--ADVDL 484
Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
+ + + + L R ++GEY A+ ++ +
Sbjct: 485 MLYQNKTVKANHTLDSLIEEYKEHPILDELLWLKSRLSKEKGEYEIAVELLSQIVFDMPY 544
Query: 223 AEHAEEAMARLVEAYVAL-ALMDEAREVVSLIQERYPQGYWARYVETLVK 271
++A+ + Y L ++A+E + +P + +
Sbjct: 545 GILTDDALFEMALVYEELIENKEKAQEYYQQLLTDFPGSIFVAEARKRFR 594
>gi|253698839|ref|YP_003020028.1| hypothetical protein GM21_0185 [Geobacter sp. M21]
gi|251773689|gb|ACT16270.1| conserved hypothetical protein [Geobacter sp. M21]
Length = 167
Score = 38.2 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 10/48 (20%), Positives = 21/48 (43%), Gaps = 4/48 (8%)
Query: 226 AEEAMARLVEAYVALALM----DEAREVVSLIQERYPQGYWARYVETL 269
++A+ RL + L +A++++ + YP+ W E L
Sbjct: 70 TDQALFRLALLTLKPGLERSVSAQAQQLLKRLAREYPRSPWTAQAEQL 117
>gi|126433545|ref|YP_001069236.1| peptidase S1 and S6, chymotrypsin/Hap [Mycobacterium sp. JLS]
gi|126233345|gb|ABN96745.1| peptidase S1 and S6, chymotrypsin/Hap [Mycobacterium sp. JLS]
Length = 464
Score = 38.2 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 12/113 (10%), Positives = 25/113 (22%)
Query: 34 FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93
F+ + ++ E Y + + + +S+A E F A
Sbjct: 283 FITPVSGFKELLGQANVTPELSPADEAYREGLDNFEAGKYSEAIENFGTALAISGDYPGA 342
Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146
R+ S ++ G + V
Sbjct: 343 REKQRESVKLRAERGDASSGPPTWVLFAAGLGALVVVGGGVLAFLYMRRNREP 395
>gi|317178432|dbj|BAJ56220.1| paralysed flagella protein [Helicobacter pylori F30]
Length = 803
Score = 38.2 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 8/53 (15%), Positives = 16/53 (30%)
Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
NY E + + +A +A I Y ++A + +
Sbjct: 262 KNYPTDPSIPEVLYYVAKALDENNNYKQAMRYYKRILLEYKDSHYAPLAQMRL 314
>gi|301168143|emb|CBW27731.1| conserved hypothetical protein [Bacteriovorax marinus SJ]
Length = 283
Score = 38.2 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 30/257 (11%), Positives = 60/257 (23%), Gaps = 11/257 (4%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
K I + L + L + + Y L ++++ +A +Y
Sbjct: 1 MKLKFNSLLFITLFALTSCATRDK----LTKTPEQKKAELFYSHGTSKLLQKDYREALKY 56
Query: 80 FNQCSRDFPFAGVARKSLLMSAF-----VQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
Q P +L MS + + +
Sbjct: 57 LKQAYEIDPKDTKILNNLGMSYYFLGQTKTAFKYLEESLDIDSKNSDALNNIGSLYFKNK 116
Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
+ R + I K
Sbjct: 117 EYDKSLKSYQEVLSNLTYRHQYRTHYNIGLIYLIKGEKDKAKENFLMANTQNQDYCPASY 176
Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
E+G+ YL Y +A+ F+ E + + L +A+E +
Sbjct: 177 ELGKLYLGEYRYNSALKWFKEASKG--VCYENPEPIYMQAITQLQLENYAQAKEKFQEVI 234
Query: 255 ERYPQGYWARYVETLVK 271
ER+ ++ +K
Sbjct: 235 ERFSSTRYSTLAHLKLK 251
>gi|194017254|ref|ZP_03055866.1| tetratricopeptide repeat protein [Bacillus pumilus ATCC 7061]
gi|194011122|gb|EDW20692.1| tetratricopeptide repeat protein [Bacillus pumilus ATCC 7061]
Length = 217
Score = 38.2 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 27/210 (12%), Positives = 53/210 (25%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
E + L + N KA E F + + P V + + E
Sbjct: 5 EIGIEALNQGNIEKAAEAFTKAIEESPKDPVPYINFANLLSSINEFERALNFFQKAIELD 64
Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
+ Y + + + +A + + K A Y
Sbjct: 65 HAAAAAYYGAGNVYTLKEDFMKAKDYFEQALQAGMENSDLFYMLGQTLIKLEQPKLAMPY 124
Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
+ ++ + + +A L AY L
Sbjct: 125 LQRAIELNEDDNEARFQFGMCLANEQLLEEAVTTFTEVIARDPQHADAFYNLGVAYAYLE 184
Query: 242 LMDEAREVVSLIQERYPQGYWARYVETLVK 271
DEA E++ + P A + + L++
Sbjct: 185 KKDEALEMLGKAIDVQPDHMLALHAQKLIQ 214
>gi|189183138|ref|YP_001936923.1| TPR repeat-containing protein 03 [Orientia tsutsugamushi str.
Ikeda]
gi|189179909|dbj|BAG39689.1| TPR repeat-containing protein 03 [Orientia tsutsugamushi str.
Ikeda]
Length = 502
Score = 38.2 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 24/224 (10%), Positives = 53/224 (23%), Gaps = 7/224 (3%)
Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
+ L + K + + + + +A E F+ + A +
Sbjct: 233 KIFNLAIKYKPNCEEAYLNKGMCLYQLEQYKEAIENFDLAIKYKSNYVGAYLNKGACLSK 292
Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP---YDQRATKLMLQ 160
+ + L +Y P++ Y + + + +
Sbjct: 293 LEQHQEAIENFDLAIKYELCNPDTYYNKGACLYELRQYQEAVENFDLAIKYNPNFEKAYL 352
Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220
+ A G K G++ AA+ + L +
Sbjct: 353 SKGACLYELRQYQEAIECCNLAIKYNPNDAEAYYNKGVCLFKLGQHQAAVENYDLAIKYN 412
Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSL-IQERYPQGYWA 263
+ +A L EA E +L I+
Sbjct: 413 PNYV---DAYYNKGLCLSKLGQAQEAVENFNLAIKYNPNDAEAY 453
>gi|163942700|ref|YP_001647584.1| NLPA lipoprotein [Bacillus weihenstephanensis KBAB4]
gi|229014174|ref|ZP_04171295.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
mycoides DSM 2048]
gi|229135813|ref|ZP_04264583.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
cereus BDRD-ST196]
gi|229169707|ref|ZP_04297407.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
cereus AH621]
gi|163864897|gb|ABY45956.1| NLPA lipoprotein [Bacillus weihenstephanensis KBAB4]
gi|228613746|gb|EEK70871.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
cereus AH621]
gi|228647679|gb|EEL03744.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
cereus BDRD-ST196]
gi|228747128|gb|EEL97010.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
mycoides DSM 2048]
Length = 270
Score = 38.2 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 12/70 (17%), Positives = 22/70 (31%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K LT S ++ L + + L E+ EKA L+++ +
Sbjct: 1 MKKLLLTALISTSIFGLAACGGKDKDEKKLVVGASNVPHAEILEKAKPLLEKKGIELEIK 60
Query: 79 YFNQCSRDFP 88
F
Sbjct: 61 KFQDYVLPNK 70
>gi|85716815|ref|ZP_01047781.1| Tetratricopeptide [Nitrobacter sp. Nb-311A]
gi|85696313|gb|EAQ34205.1| Tetratricopeptide [Nitrobacter sp. Nb-311A]
Length = 736
Score = 38.2 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 23/198 (11%), Positives = 54/198 (27%)
Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
+A + + + A + D P + L + + + ++
Sbjct: 381 RAAISIDKGRIDSAISDLREAMNDQPKSPELLLLLAAAYEKDGKNELADRQYADALKFSN 440
Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
P+ + + LQ +S + + + GA
Sbjct: 441 MIPQVALRYAAFLQRRDDVTHAEHVLIEASGRYPQNLQLLSSLAQIKLSQKNWTGAAAVA 500
Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242
+ + L + + A A + + LV AYV
Sbjct: 501 DAVGKLGEGRVLSDQIRALALAGQGKVDESIAALEDAHQAAPTALQPVVSLVSAYVKQGK 560
Query: 243 MDEAREVVSLIQERYPQG 260
++A ++ I ++YP+
Sbjct: 561 PEKAASLLQEISQKYPEN 578
>gi|85706709|ref|ZP_01037801.1| hypothetical protein ROS217_08159 [Roseovarius sp. 217]
gi|85668767|gb|EAQ23636.1| hypothetical protein ROS217_08159 [Roseovarius sp. 217]
Length = 281
Score = 38.2 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 13/54 (24%), Positives = 21/54 (38%)
Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
+ A + + D A E++ RL A L EA ++ + RYP
Sbjct: 210 QQSEAARAYLDSFSAAPDGAEAPESLFRLGRALGRLGQTQEACVTLAQVAARYP 263
>gi|302344515|ref|YP_003809044.1| hypothetical protein Deba_3097 [Desulfarculus baarsii DSM 2075]
gi|301641128|gb|ADK86450.1| Tetratricopeptide TPR_2 repeat protein [Desulfarculus baarsii DSM
2075]
Length = 803
Score = 38.2 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 18/200 (9%), Positives = 49/200 (24%), Gaps = 6/200 (3%)
Query: 64 AVLFLKEQNFSKAYEYFNQ--CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
A ++K + +A Q + + + ++
Sbjct: 179 AQEYIKLDRYDQALADLAQSVALAPDMLTPRLLTLQVYMKQNKLDQAEKTLREAIAMRPQ 238
Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ-YMSRIVERYTNSPYVKGARF 180
+ V+ + A + + ++R E +
Sbjct: 239 EARLQLMLVELLMRRQKSDEAGKTLREIIARHPENESYRLSLARFYETTGQEKKAEETYL 298
Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
+ +Y RG+ A D+ A + E +
Sbjct: 299 EAVRMAPDSIWPSILTATFYASRGQGHKAQAYLDQAKKIAPDSPVPPTA---MAELNLEQ 355
Query: 241 ALMDEAREVVSLIQERYPQG 260
++ A++ + + R+P+
Sbjct: 356 GRVELAQKQIKQVLARWPKN 375
>gi|262196629|ref|YP_003267838.1| secreted protein [Haliangium ochraceum DSM 14365]
gi|262079976|gb|ACY15945.1| putative secreted protein [Haliangium ochraceum DSM 14365]
Length = 372
Score = 38.2 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 9/49 (18%), Positives = 19/49 (38%)
Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
+Y D+ ++A L L A + ++ + R+P + R
Sbjct: 308 PDDYPDSILIDDARFELARTLAQLDERARACQTLAELARRHPHSRYLRE 356
>gi|89068038|ref|ZP_01155455.1| hypothetical protein OG2516_07652 [Oceanicola granulosus HTCC2516]
gi|89046277|gb|EAR52334.1| hypothetical protein OG2516_07652 [Oceanicola granulosus HTCC2516]
Length = 274
Score = 38.2 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 29/77 (37%)
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
A G + GE AA + + E A +A+ RL L +DEA
Sbjct: 188 AQAHFLRGEAHEALGEPQAAARAYLEAFSGEPRGEIAPDALFRLGGTLGVLGQVDEACVT 247
Query: 250 VSLIQERYPQGYWARYV 266
+S + R+P+ A
Sbjct: 248 LSEVTNRFPESDAALEA 264
>gi|308183384|ref|YP_003927511.1| paralysed flagella protein [Helicobacter pylori PeCan4]
gi|308065569|gb|ADO07461.1| paralysed flagella protein [Helicobacter pylori PeCan4]
Length = 803
Score = 38.2 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 8/53 (15%), Positives = 15/53 (28%)
Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
NY E + + +A +A I Y +A + +
Sbjct: 262 KNYPTDPGIPEVLYYVAKALDENNNYKQAMRYYKRILLEYKNSRYAPLAQMRL 314
>gi|226314107|ref|YP_002774003.1| hypothetical protein BBR47_45220 [Brevibacillus brevis NBRC 100599]
gi|226097057|dbj|BAH45499.1| hypothetical protein [Brevibacillus brevis NBRC 100599]
Length = 841
Score = 38.2 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 19/222 (8%), Positives = 44/222 (19%), Gaps = 5/222 (2%)
Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
DS+ +Y + + ++ KA Y ++ + + + +
Sbjct: 577 KGEQSDGDSIDQYTPVETLYNLGMEAYEAGDYEKAILYDTHAAKKGYAPSMNNLAHMYYS 636
Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL----VGMSYAQMIRDVPYDQRATKL 157
+ + + Y + M + L
Sbjct: 637 LEGFEDADKAFYWYELGAAAGNHHAMNGLGCCYRHGIGTEPDADQAMYWMGKAAEHGHAL 696
Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
+ P + L + E Y +
Sbjct: 697 AHNNLGATYYDGELVPQDLDKALWHYEQGEVLGSPVFEWLGYLHDSKGNYEKALHYYQQD 756
Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVV-SLIQERYP 258
A Y +D A + ++ YP
Sbjct: 757 YEAGSDFSAYNLGIFYSNGYGTAKNIDAAITYFHAALERDYP 798
>gi|124024108|ref|YP_001018415.1| hypothetical protein P9303_24171 [Prochlorococcus marinus str. MIT
9303]
gi|123964394|gb|ABM79150.1| Hypothetical protein P9303_24171 [Prochlorococcus marinus str. MIT
9303]
Length = 733
Score = 38.2 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 29/222 (13%), Positives = 61/222 (27%), Gaps = 8/222 (3%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
+ Y ++L + + A YFN+ A +L ++ +
Sbjct: 212 EIKPEFPEACYNLGFIYLNQGDIETAINYFNKALLLKWNYPEALNNLGIAFKAKGEISPA 271
Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD---QRATKLMLQYMSRIVE 167
+ E T +PE YL + I + L + ++
Sbjct: 272 INSWRKALEIKTDFPEVYYNLGSIYLDQGNIETAINFFKKALILKENYPEALNNLGNSLQ 331
Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
A + + +G Y +G+ +I F+ LA + D
Sbjct: 332 EKGELDAAIAAYKKALNHKPSYREAQNNLGCVYRAQGDLENSIRIFKKALALHPD---HP 388
Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
E ++ L + ++ A + + L
Sbjct: 389 EILSNLGTSLEEKGDLEAAISSFNNAISN--NSNYPTAHYNL 428
>gi|26246712|ref|NP_752752.1| hypothetical protein c0822 [Escherichia coli CFT073]
gi|26107111|gb|AAN79295.1|AE016757_199 Hypothetical protein ybgF precursor [Escherichia coli CFT073]
Length = 221
Score = 38.2 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 10/54 (18%), Positives = 17/54 (31%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
+ A+ FQ + NY D+ + A L + D+A
Sbjct: 146 YNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDDA 199
>gi|325110536|ref|YP_004271604.1| hypothetical protein Plabr_4005 [Planctomyces brasiliensis DSM
5305]
gi|324970804|gb|ADY61582.1| hypothetical protein Plabr_4005 [Planctomyces brasiliensis DSM
5305]
Length = 596
Score = 38.2 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 21/175 (12%), Positives = 51/175 (29%)
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
E F + A ++++ + A+L +E + + +
Sbjct: 402 EIFADFEPAYWPYPRAMYERVVNSDATGDRLRSLYMATLFKEVQSLRSSENQNEERVFTS 461
Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
+ ++ V + ++ + + + Q G
Sbjct: 462 SLEKRMLMARVDQLTGQLSSAISTFVKLRLQQGVAGEGDIVALENLMRYLQAEDALYWSG 521
Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ G++ A + L Y++ + A L E+ MDEA+ + L
Sbjct: 522 VAQFENGDFRTAGNTLKNYLDRYTEGRWVQPARELLAESLAEQDRMDEAKAALKL 576
>gi|253583376|ref|ZP_04860574.1| extracellular solute-binding protein family 1 [Fusobacterium
varium ATCC 27725]
gi|251833948|gb|EES62511.1| extracellular solute-binding protein family 1 [Fusobacterium
varium ATCC 27725]
Length = 361
Score = 38.2 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 9/49 (18%), Positives = 19/49 (38%), Gaps = 3/49 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLF 67
+ K AL I I L+G + ++ + +++E+A
Sbjct: 1 MKKIALGI---IMAALLIGCGSKEKKETLTAEKINSMTAEQIFEEAKKE 46
>gi|147919338|ref|YP_686926.1| hypothetical protein RCIX2537 [uncultured methanogenic archaeon
RC-I]
gi|110622322|emb|CAJ37600.1| hypothetical protein RCIX2537 [uncultured methanogenic archaeon
RC-I]
Length = 310
Score = 38.2 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 20/218 (9%), Positives = 58/218 (26%), Gaps = 3/218 (1%)
Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
+ ++ + + +E + F N+ +A E F + S P A + L + +
Sbjct: 11 EEEKFDLSTDQEIDQHFEAGMDFRDMGNYGRAVEEFRKMSELEPDDAEAHRLLGEALYRN 70
Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
+ + + + Y E++ + Y + ++ + ++ M
Sbjct: 71 GAYEEALKEFDKAIQLDEDYTEARYWKSIVYAKMGREKESSQEYRTAYDSDPEDVELMYE 130
Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
+ + A ++ +
Sbjct: 131 WAKEVAAAGKYYEAIRVYRDILIAHPEYYEARVDLGSALIRAGKENEGYEEYALARASDP 190
Query: 225 HAEEAMARLVEAYVALALMDEAREVVS---LIQERYPQ 259
+ E +++ +DEA + + P
Sbjct: 191 DNPMIPFMIGEFLLSMDRLDEALDAFKSAQELSPNAPD 228
>gi|270004229|gb|EFA00677.1| hypothetical protein TcasGA2_TC003554 [Tribolium castaneum]
Length = 858
Score = 37.9 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 15/201 (7%), Positives = 56/201 (27%), Gaps = 7/201 (3%)
Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
+Y ++ ++ ++++A + F + S + ++ +
Sbjct: 549 EAIYNLGLVLKRQGHYAEALQCFQRFSGSLALLPNVVYQVANLLELKGDSEAAADMYQQL 608
Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDV---PYDQRATKLMLQYMSRIVERYTNSPY 174
+ + Y Q A ++ ++
Sbjct: 609 LGLVPTDAGALQKMGELYDHDGDKQQAHHYHIESFRYYPANLSVINWLGSYYIEMQVVER 668
Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234
+ + + + + + G A+ +Q + + + E + LV
Sbjct: 669 ALVYFEKAALMQPNEPKWNMMVAGCHRRSGNMHRALTLYQEIHRKFPE---NVECLRFLV 725
Query: 235 EAYVALALMDEAREVVSLIQE 255
+ + EA++ + +++
Sbjct: 726 RLCNDMGMR-EAQDYILELKK 745
>gi|254417207|ref|ZP_05030952.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
PCC 7420]
gi|196176013|gb|EDX71032.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
PCC 7420]
Length = 260
Score = 37.9 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 26/259 (10%), Positives = 62/259 (23%), Gaps = 9/259 (3%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ KF I ++ +V + Q + + V + + A + ++ ++ A
Sbjct: 1 MIKFPNHIPAALIGTAIVWVQPQFAVALTNLVVAQQPTVQNLINSARIKAEKGDYQGAIA 60
Query: 79 YFNQCSRDFPF---AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
Q + P + R + A A + ++ + + +
Sbjct: 61 DLTQALQLSPNNAESYHRRANAYYQLENYQGAIADYNQAIQLNPDDVKAYYNRGITHSHL 120
Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
+ A
Sbjct: 121 GDYQGAIADFNQAIQLNPDFAAAYYNRGLARFNLGDDQGAIADYNQAIKLNPDYAIAYNN 180
Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
G G+ AI F + D + AY+ L +A E
Sbjct: 181 RGVARSNLGDDQGAIADFNQAIQRNPDNANV---YYNRGVAYLNLGDQPKALEDFRQAAT 237
Query: 256 RYP---QGYWARYVETLVK 271
+ +Y++ +++
Sbjct: 238 LFQQQGNTEIYQYIQQIIR 256
>gi|33241223|ref|NP_876165.1| TPR repeat-containing protein [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
gi|33238753|gb|AAQ00818.1| Secreted TPR repeats protein [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
Length = 261
Score = 37.9 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 32/240 (13%), Positives = 72/240 (30%), Gaps = 44/240 (18%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K+ L + F LV ++ +++KA+ +E NF +A +
Sbjct: 1 MKKYLLILVFVWVFLSLVSPVDAVNKSSIPP----------LFKKALNESREGNFLQALK 50
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+++ FP VA + + +
Sbjct: 51 TWDEFLVSFPDDAVAISNRGN---------------------VRLALGDAEGAILDQTRA 89
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
+ + D ++ + + + + + +V Q A +G
Sbjct: 90 VELLPLAIDPHVNRGIAEESIGELKKAI----------DDYKWVLEKEPQNALALYNLGN 139
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
+G+++ A F + A + A L DEA + + L+ ++YP
Sbjct: 140 VRGSQGDWLEAKILFNKASFA---SPSLVMARSSRALACYQLREFDEAEKELRLLIKKYP 196
>gi|261416281|ref|YP_003249964.1| TPR repeat-containing protein [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|156072342|gb|ABU45493.1| TPR domain protein [Fibrobacter succinogenes subsp. succinogenes
S85]
gi|261372737|gb|ACX75482.1| TPR repeat-containing protein [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|302325833|gb|ADL25034.1| tetratricopeptide repeat protein [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 746
Score = 37.9 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 24/227 (10%), Positives = 60/227 (26%), Gaps = 4/227 (1%)
Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
+ +++ + + VYE A+ + + +A +F + D+
Sbjct: 378 KAKSFENLRMHKAAKSVYEDAIKRYPQSD-QRAKYHFQLMNIDYKEGKYTEAMTKYQNIA 436
Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
Q +A + ++ + + V L +
Sbjct: 437 QKFGESDVKADADYVAGQIKFEQGLYQESVDLLASILPGNANYFYARYTMGIANSRMGKF 496
Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
N + L + GE Q+ ++
Sbjct: 497 D---EAENCFRDITEQPVSNQSERDLQDAARVKLGHLFFSGEKPDIAAAAQMYGQVQKES 553
Query: 224 EHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
+EAM + +++ + DEA + I P+ + ++
Sbjct: 554 PVFDEAMLGIAWSFLKVNKPDEAIKPAKWIISNLPESFLVSEAYLVI 600
>gi|320535788|ref|ZP_08035869.1| tetratricopeptide repeat protein [Treponema phagedenis F0421]
gi|320147336|gb|EFW38871.1| tetratricopeptide repeat protein [Treponema phagedenis F0421]
Length = 478
Score = 37.9 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 27/241 (11%), Positives = 72/241 (29%)
Query: 30 IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89
++V + + + L + ++ +A L L N K EY ++ + P
Sbjct: 96 LSVLISANKIQDAEKLANLLEKENPENIDILFSQATLALATNNAKKRSEYLHKILKINPK 155
Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
VA + + K ++ + ++ + + + A ++
Sbjct: 156 NIVALTEQGYDLYSMRNYAKAKKVFLKALQEEPKHTGALLGLGQINYIENNLANAEKNYE 215
Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
+ M+ + + + + A + + A + +
Sbjct: 216 LILEKEPQNVMAMAELARIKSETNRMLEALNDMEKVVSLDAKNAEYWIDLGVYCSQAGRK 275
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
+ + + A L +L +EA + + E YP+ Y+A +
Sbjct: 276 ERANEAFKKAVALDPQSYFAYIYLAGINDSLGNKEEAIKYYKKVIELYPKYYFAYESLGV 335
Query: 270 V 270
+
Sbjct: 336 L 336
>gi|308506585|ref|XP_003115475.1| hypothetical protein CRE_18660 [Caenorhabditis remanei]
gi|308256010|gb|EFO99962.1| hypothetical protein CRE_18660 [Caenorhabditis remanei]
Length = 775
Score = 37.9 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 15/260 (5%), Positives = 65/260 (25%), Gaps = 13/260 (5%)
Query: 2 SAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVY 61
++G + + + + F I + + + V D + + ++
Sbjct: 375 CILIGFGVEVARKKFSTCTESKWILSFVILILSIFS-------YKTMQRVDDWKTEESLF 427
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
+ A+L + F + +++L + + S
Sbjct: 428 KSALLVNPTKAHMNLGYVFTTQKKFELAKYHYQEALKSKGNLADAWYNLGILVSKSSNST 487
Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
+ + + + +D + ++ +++ +
Sbjct: 488 QEAIHYYQKALQSRSNFAAAHLNLALLLHDVGLHQKAFSHLDECLQKSGENLKSYRNHQR 547
Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
+ ++ + + + + ++ + + Y +
Sbjct: 548 TQATCAYNKGRLLQKSKEFHVAIDTFKL--ALNIGGKHFEHTSSV---LNSIGTCYNEIG 602
Query: 242 LMDEAREVVS-LIQERYPQG 260
++ A + I E +
Sbjct: 603 DVESAEKYFEAAISENHVNS 622
>gi|291521940|emb|CBK80233.1| hypothetical protein CC1_14520 [Coprococcus catus GD/7]
Length = 522
Score = 37.9 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 6/42 (14%), Positives = 12/42 (28%)
Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
A+ + +Y L A + + YP +
Sbjct: 414 AVFYMGRSYQLLGDTGNAAGYYKRLIQSYPNSDLIDDARKYL 455
>gi|283781318|ref|YP_003372073.1| TPR repeat-containing protein [Pirellula staleyi DSM 6068]
gi|283439771|gb|ADB18213.1| TPR repeat-containing protein [Pirellula staleyi DSM 6068]
Length = 829
Score = 37.9 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 15/113 (13%), Positives = 30/113 (26%), Gaps = 3/113 (2%)
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
SY M D + + + + + + + + +
Sbjct: 446 HSYEAMWTDATAKAPQNLRAERALMVWLASSGRALESVDRARSLLAKNPDMPERHLNLAI 505
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
E A + +L + ++ E+A L AY L EA
Sbjct: 506 ALHLNNEPAEAEVQAKLAIDQLPNS---EDAFYILGCAYDKLGKKREAETAFR 555
>gi|261839992|gb|ACX99757.1| paralysed flagella protein [Helicobacter pylori 52]
Length = 801
Score = 37.9 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 8/53 (15%), Positives = 16/53 (30%)
Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
NY E + + +A +A I Y ++A + +
Sbjct: 260 KNYPTDPSIPEVLYYVAKALDENNNYKQAMRYYKRILLEYKDSHYAPLAQMRL 312
>gi|253582116|ref|ZP_04859340.1| tetratricopeptide repeat family protein [Fusobacterium varium ATCC
27725]
gi|251836465|gb|EES65002.1| tetratricopeptide repeat family protein [Fusobacterium varium ATCC
27725]
Length = 950
Score = 37.9 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 27/233 (11%), Positives = 62/233 (26%), Gaps = 6/233 (2%)
Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99
+ S + Y+R +Y+ + +L ++N+SKA E F + + +
Sbjct: 114 KNSDFYMEALDKNGDFYERALYDSGMTYLAKENYSKAEEMFQRVIQMNKKYYSEAILSMA 173
Query: 100 SAFVQYSAGKYQQA----ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
+ + K S G++ + Y S I
Sbjct: 174 MSSYNKADYKKTLLFLNEYSNGKDKNKNQSLLYYLYGSTYYKLNSTEDAIVYFQKVANKD 233
Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
K+ I+ KE + +
Sbjct: 234 KISSYGKKSILSLIEIYSNRGDVNSMQRYLTMLENTKEYGEAMRMIGDLYATRGEYEKAV 293
Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER--YPQGYWARYV 266
+ ++ + + M + L + EA++ ++ Y Q + +
Sbjct: 294 GYYSKTNTPNDPKLMYGYGFSLYKLNRLKEAQKYFEGLRNTTYYNQSLYYIFA 346
>gi|67920836|ref|ZP_00514355.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501]
gi|67856953|gb|EAM52193.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501]
Length = 380
Score = 37.9 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 30/214 (14%), Positives = 66/214 (30%), Gaps = 9/214 (4%)
Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA-FVQYSAGKYQQAASLGEEYIT 122
V+ L+++++ A E + + P A + S + Q + + +
Sbjct: 168 GVVLLRQEDYEGAAEAYKRVIALDPNNPEAFAIMGSSLLQQKQLDQALQYLGNAVQRFPR 227
Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS--RIVERYTNSPYVKGARF 180
+ Y G ++ + + + RI E N
Sbjct: 228 DVDLRLLLATAYLQQGQLELGKEHLKRAERVDPRNIKVQLKIARIYEVQDNLDEALNIYR 287
Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
V+ + +GR L + +Y+ A +Q ++ E L A+
Sbjct: 288 SVSFFNRKNPEAFAGVGRIQLAQKDYLGATITYQDLIEIIP---QNPEPYYYLGMAFKER 344
Query: 241 ALMDEARE---VVSLIQERYPQGYWARYVETLVK 271
EA++ + + Y + V+ L+K
Sbjct: 345 NRNGEAKKALDYAKKLYQEYDNTEGIKKVDDLLK 378
>gi|332216603|ref|XP_003257442.1| PREDICTED: dnaJ homolog subfamily C member 3 [Nomascus leucogenys]
Length = 504
Score = 37.9 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 22/258 (8%), Positives = 66/258 (25%), Gaps = 20/258 (7%)
Query: 34 FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93
L ++ + + + +A+ +++ A + ++ +
Sbjct: 131 VLKSNPSENEEKEAQSQLIKSDEMQRLRSQALDAFGSGDYTAAIAFLDKILEVCVWDAEL 190
Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153
R+ + K + E+ Y + + +V +
Sbjct: 191 RELRAECFIKEGEPRKAISDLKAASKLKNDNTEAFYKISTLYYQLGDHELSLSEVRECLK 250
Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK----------- 202
+ + + + + ++ A + GR A + E
Sbjct: 251 LDQDHKRCFAHYKQVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPSIAEYTIRSKE 310
Query: 203 -----RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA-REVVSLIQER 256
+ + ++ A+ EAY+ + DEA ++ + +
Sbjct: 311 RICHCFSKDEKPVEAIRVCSEVLQMEPDNVNALKDRAEAYLIEEMYDEAIQDYETAQEHN 370
Query: 257 YPQGYWA---RYVETLVK 271
+ L+K
Sbjct: 371 ENDQQIREGLEKAQRLLK 388
>gi|303328120|ref|ZP_07358559.1| N-acetylmuramoyl-L-alanine amidase [Desulfovibrio sp. 3_1_syn3]
gi|302861946|gb|EFL84881.1| N-acetylmuramoyl-L-alanine amidase [Desulfovibrio sp. 3_1_syn3]
Length = 803
Score = 37.9 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 16/113 (14%), Positives = 35/113 (30%), Gaps = 1/113 (0%)
Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
Q + + + + AA + + G+Y A+ + +
Sbjct: 263 WRQPWEELQAEFQRIYESRKNWAVAPGALFRSAASQEALADCSHLSGDYRRALELYLSLT 322
Query: 218 ANYSDAEHAEEAMARLVEAY-VALALMDEAREVVSLIQERYPQGYWARYVETL 269
+ + A++A+ L E ++ I YP+G A +L
Sbjct: 323 REFPKSALADDALLCAARIQSTRLGKTSEGLALLDEIAANYPRGDMAAEARSL 375
>gi|294810614|ref|ZP_06769264.1| putative lipoprotein [Bacteroides xylanisolvens SD CC 1b]
gi|298483259|ref|ZP_07001438.1| outer membrane protein [Bacteroides sp. D22]
gi|294442156|gb|EFG10973.1| putative lipoprotein [Bacteroides xylanisolvens SD CC 1b]
gi|295085856|emb|CBK67379.1| SusD family. [Bacteroides xylanisolvens XB1A]
gi|298270576|gb|EFI12158.1| outer membrane protein [Bacteroides sp. D22]
Length = 605
Score = 37.9 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 22/216 (10%), Positives = 56/216 (25%), Gaps = 4/216 (1%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K + ++A L + + ++ + AV + A
Sbjct: 1 MMKKIYLLAVALAGTLLTSCSDFLDKVPLVVPSSETFLTN---QSAVTNYVNGLYI-ALP 56
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+++ + + G+ Q++ E+ Y ++V+Y
Sbjct: 57 SAGAYGMGIMGEEKNSDNMVAMVYDRRMNGELQESIGGVTEWQKGYQNLRSVNYFLEYYK 116
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
+ A+ +V + Y + S V + L +
Sbjct: 117 VPAAEETAEVLSLKGEAYFFRAYWHYYLLTKFGSIPVMDKFWDGNATVGGLQIPARDRSA 176
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234
+ + A + Y +EA +
Sbjct: 177 VAQFILDDLKAAKELLYSRSKYQGLRICKEAAMVMA 212
>gi|160886090|ref|ZP_02067093.1| hypothetical protein BACOVA_04097 [Bacteroides ovatus ATCC 8483]
gi|237720837|ref|ZP_04551318.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|156108903|gb|EDO10648.1| hypothetical protein BACOVA_04097 [Bacteroides ovatus ATCC 8483]
gi|229449672|gb|EEO55463.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
Length = 379
Score = 37.9 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 19/211 (9%), Positives = 49/211 (23%), Gaps = 12/211 (5%)
Query: 19 LYKFAL--TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76
+ K L + S+A L+G + + + V + Y A+ K+ + A
Sbjct: 1 MKKIYLLYIVLISLATTSLIGCSDWTESEAKTFPESIVSDE---YYAALRAYKQTDHQVA 57
Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS-------LGEEYITQYPESKN 129
+ +F S + + + + S + G + ++
Sbjct: 58 FGWFGGWSGEGAYMKSSLAGIPDSVDIVSIWGNWSNITEAQKKDLQFCQQVKGTRFTMCF 117
Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
+ + K + +N ++ +
Sbjct: 118 IIRSVGDQITPQNIRENWENMGFSSEKEAVNDFWEWPSDESNKEAIEASIRKYASAIADT 177
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220
K G + +
Sbjct: 178 VNKYGYDGFDIDYEPNFGNPGNIVDEDDRMF 208
>gi|332829766|gb|EGK02412.1| glycosyl hydrolase family 10 [Dysgonomonas gadei ATCC BAA-286]
Length = 387
Score = 37.9 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 29/234 (12%), Positives = 68/234 (29%), Gaps = 6/234 (2%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVY-EKAVLFLKEQNFSKAY 77
+ + S+ + + +++ +V + + Y A+ + Q A
Sbjct: 1 MKRNIYYCLISLLLLPIFACNAKNNGEVKNEPSLKEALHGKFYIGTALNLDQIQGKDTAA 60
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
+ D A KS+ + + + + + +
Sbjct: 61 INIVKTEFDAIVAENCMKSMYLQPKEGEFYFEDADKFVEFGKQNNLFITGHCLIWHSQAP 120
Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV----GRNQLAAKE 193
+ + + M +++ +V RY + R K
Sbjct: 121 AWFFTDDKGKDVSAEVLKQRMKNHITTVVSRYKGQIKGWDVVNEAIMEDGSYRESKFYKI 180
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSD-AEHAEEAMARLVEAYVALALMDEA 246
+ L A P +L +Y++ E EA+ARLV ++ + +A
Sbjct: 181 LGEEFIPLVFQYAHDADPDAELYYNDYNEWYEGKREAIARLVRSFKEKGIRIDA 234
>gi|298246522|ref|ZP_06970328.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter
racemifer DSM 44963]
gi|297554003|gb|EFH87868.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter
racemifer DSM 44963]
Length = 747
Score = 37.9 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 28/216 (12%), Positives = 54/216 (25%), Gaps = 10/216 (4%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
K ++ L+ +AY+ + + + A + + Q ++
Sbjct: 516 SKGLILLEMGRLREAYQAYQEALKRDSRFAPALYGMGNVLYAQQKFKSALDNYDRALQFD 575
Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVP---YDQRATKLMLQYMSRIVERYTNSPYVKGA 178
Y + +Y + + + + ++ R A
Sbjct: 576 PNYVKVWERRGQLLQELGNYRRSLESFERATQIDPSFAPAWLGKATVLSRMERYDMALNA 635
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
L A G + G Y AA+ + L A+
Sbjct: 636 YEEALRRNPSLPAALNGKGNALYRLGNYSAALSAYDNALKVNPRMVS---ALHNKSLILK 692
Query: 239 ALALMDEAREVVS---LIQERYPQGYWARYVETLVK 271
L +EA + P W R E L K
Sbjct: 693 LLGRYNEALAAAESAIRLAPNDPDN-WLRKAEALRK 727
>gi|255078738|ref|XP_002502949.1| intraflagellar transport particle protein IFT88 [Micromonas sp.
RCC299]
gi|226518215|gb|ACO64207.1| intraflagellar transport particle protein IFT88 [Micromonas sp.
RCC299]
Length = 768
Score = 37.9 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 17/197 (8%), Positives = 46/197 (23%)
Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
+Y ++ + + + A F + P A L + + + L
Sbjct: 497 VDAIYNLGLVNKRLEQYQDALVNFRKVISIIPNDPEATWQLADVCELMGNRSMAIKQFDL 556
Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
+ P + A+ ++ R + + + + +
Sbjct: 557 LHARLPTDPGVLARLGALHAEAGDEAKALQCYNESHRVYPPNIPVIEWLGTYHAQQRAYE 616
Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
A + + + + ++ E + +V
Sbjct: 617 KAHEFFAFASEVKPRDTKWPLLAASCQRRAGKLADALETYKSVHARNSDNAECLRHIVNI 676
Query: 237 YVALALMDEAREVVSLI 253
L EA E +
Sbjct: 677 LTDLGRTSEAAEYDEKL 693
>gi|149918743|ref|ZP_01907230.1| hypothetical protein PPSIR1_31713 [Plesiocystis pacifica SIR-1]
gi|149820344|gb|EDM79760.1| hypothetical protein PPSIR1_31713 [Plesiocystis pacifica SIR-1]
Length = 304
Score = 37.9 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 10/98 (10%), Positives = 30/98 (30%), Gaps = 1/98 (1%)
Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106
+ + + +VY + ++ +A + F + FP + V ++ + +
Sbjct: 49 EDEGIDTEKKAMDVYNQGKEAYDSGDYDEALQLFLEAQSLFP-SPVFHYNIGLCHESLEN 107
Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
+ + + D V +S +
Sbjct: 108 FEQAIISYKAYLRSYESAYGEQPDDQVNTENKISRLEQ 145
>gi|77919616|ref|YP_357431.1| TPR repeat-containing protein [Pelobacter carbinolicus DSM 2380]
gi|77545699|gb|ABA89261.1| tetratricopeptide repeat (TPR) protein [Pelobacter carbinolicus DSM
2380]
Length = 243
Score = 37.9 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 33/244 (13%), Positives = 68/244 (27%), Gaps = 11/244 (4%)
Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90
+ G S + + Y V LK N + A F + +
Sbjct: 3 LALVVSGCTPSSG-----SRTKATQNAKVQYTLGVAELKNNNPTMALAKFLEAEKFDKND 57
Query: 91 GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150
++ L + Q + + E + + + L +
Sbjct: 58 SDIQEGLAQA--YQRKGAFAEAEKHYLRAIELRPDEPRYFNNLGALYLDMQRPDDALLHL 115
Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
++ AT L+ + + ++K + +K YL+ GE + +
Sbjct: 116 NKAATNLLFPQPEIPLTGIGMAYFMKQEHQQSIASYREALSKNPRYIEAYLRLGEVLTTL 175
Query: 211 PRFQLVLANYSDA----EHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
+ L Y A + AY+ MD AR+ ++E P+
Sbjct: 176 GQVDRGLIEYKKALLLAPEYGRLHFYMGMAYMKNGQMDPARQAFLKVRELIPESEMGIRA 235
Query: 267 ETLV 270
+
Sbjct: 236 GDYL 239
>gi|56421097|ref|YP_148415.1| hypothetical protein GK2562 [Geobacillus kaustophilus HTA426]
gi|261418421|ref|YP_003252103.1| hypothetical protein GYMC61_0955 [Geobacillus sp. Y412MC61]
gi|319767619|ref|YP_004133120.1| hypothetical protein GYMC52_2597 [Geobacillus sp. Y412MC52]
gi|56380939|dbj|BAD76847.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426]
gi|261374878|gb|ACX77621.1| Tetratricopeptide TPR_2 repeat protein [Geobacillus sp. Y412MC61]
gi|317112485|gb|ADU94977.1| Tetratricopeptide TPR_1 repeat-containing protein [Geobacillus sp.
Y412MC52]
Length = 220
Score = 37.9 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 22/215 (10%), Positives = 52/215 (24%), Gaps = 10/215 (4%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
E+ + +++E + +A F+ P ++ K +
Sbjct: 6 EQGLAYMREGKYEEAIRCFSAAVEQHPDDPAGYINIGTVLVAAGEEEKALDCFRQALKID 65
Query: 122 TQYPESKN-VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
+ + + V+Y + + +
Sbjct: 66 KKAAAAYYGMGTVHYKREQFAKAKDMFERALGLGLDDADTHFMLGMSLWRL-----EMPR 120
Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA----EHAEEAMARLVEA 236
+ A + G +A + + +A L
Sbjct: 121 LALPYLQRAAELNETDAEALFQLGLCLATLDYVDEAKRYFEKTLELDPRHADAYYNLGVI 180
Query: 237 YVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
Y +D AR + + E P A Y + L++
Sbjct: 181 YAYKDELDAARNMFAAALEAKPDHVLAGYGKKLME 215
>gi|54302280|ref|YP_132273.1| hypothetical protein PBPRB0600 [Photobacterium profundum SS9]
gi|46915702|emb|CAG22473.1| hypothetical protein PBPRB0600 [Photobacterium profundum SS9]
Length = 361
Score = 37.9 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 21/289 (7%), Positives = 67/289 (23%), Gaps = 39/289 (13%)
Query: 14 AWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVR-----------------Y 56
++ + + +A L+G + D
Sbjct: 1 MTTFKKKTYQFILLSILAPLILLGCASNEETVDTTNPNFDHELYDGKATLGLNGDFPPAS 60
Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
E + + ++ A + + ++ ++ G Y+ A
Sbjct: 61 AAEAIARGDQAYRSKDTDLALYEYIRALNFPVQ-ENIDQAYYKIGYIHQQRGNYELAQVA 119
Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
+ ++ ++ + + R+ ++ Q + P
Sbjct: 120 YNRAVIIKGDNIQYAAALGIIELKQGEQKNAEKQLLRSIRMDQQRFN----NEKWEPTQP 175
Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
+ + + + + A +Q L + +A+ L +
Sbjct: 176 DFVQQLKINQTSPLNAYIAYAVIKDLNARHTEAQALYQACLRINHKSR---QALTNLGYS 232
Query: 237 YVALALMDEA--------------REVVSLIQERYPQGYWARYVETLVK 271
Y + +A + S + Y + ++
Sbjct: 233 YYLSGDLKQAEMINRRATTIYQTDKRAWSNLGLVYIRSKRYSDALDALQ 281
>gi|332707992|ref|ZP_08427990.1| hypothetical protein LYNGBM3L_02170 [Lyngbya majuscula 3L]
gi|332353217|gb|EGJ32759.1| hypothetical protein LYNGBM3L_02170 [Lyngbya majuscula 3L]
Length = 885
Score = 37.9 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 20/227 (8%), Positives = 60/227 (26%), Gaps = 9/227 (3%)
Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
+G ++ R + + ++A + + +A Q ++ +G
Sbjct: 58 LGGFNKTKRSRIHSKIQQRLIPDSLGQQAQHLYETGQYQQAIPLLEQVISNYRESGDIIG 117
Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
+ + + + E Y + + + + +
Sbjct: 118 EINSLVNLALVYQRLGKLEQAQEILSQSYSKLSQLHNTKESQELQAQILSVEGQVYLSL- 176
Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
Q +S + + +V+ R + + + +
Sbjct: 177 GDAKQALSNWKQTSAIYQDLGDLNRLTE-----SQIYQVQALRSLGLYHQANKTLNKIKE 231
Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS---LIQERYPQ 259
L D++ A+ L + +++E++ I E P
Sbjct: 232 TLQEQPDSKLKSTALQYLGNILRRVGKFQDSQEILQQSLAIAENLPN 278
>gi|221101438|ref|XP_002159912.1| PREDICTED: similar to CG6915 CG6915-PA [Hydra magnipapillata]
Length = 1747
Score = 37.9 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 21/213 (9%), Positives = 56/213 (26%), Gaps = 4/213 (1%)
Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF---PFAGVARKSLL 98
+ + + + + + + +A EY+ +C
Sbjct: 892 EKQITINQDQLNPDVAVFLLNLGLSYNAKGQYDQAIEYYKECLDMQKLIYQDQSNPNVAD 951
Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
+ + Q + Y V + ++ + V Y +
Sbjct: 952 TLNNLGSAFYGKGQFDEAIKFYKNSLKMRNLVYHDQTHPSIANSFNNLSVAYRAKGQFDQ 1011
Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
++ + Y + F V + L +Y L + ++ F+++
Sbjct: 1012 AIGYYEKIQEFYKFIYREEPHFDVAASLHNLGTVYNAKEQYDLAINCFKKSLETFKIIYK 1071
Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
+++ L AY D+A +
Sbjct: 1072 KKPH-PKISDSLNSLGTAYHVKGQYDQAIKYFK 1103
>gi|195423963|gb|ACF96937.1| SPINDLY [Sinningia speciosa]
Length = 934
Score = 37.9 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 27/226 (11%), Positives = 54/226 (23%), Gaps = 15/226 (6%)
Query: 48 LDSVTDVRYQR-EVY-EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV-- 103
+ R E Y V++ + A + +C P +A+ ++ ++
Sbjct: 213 YEKAAIERPMYAEAYCNMGVIYKNRGDLESAIACYERCLAVSPNFEIAKNNMAIALTDLG 272
Query: 104 --------QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
Y + A + + V Y L +
Sbjct: 273 TKVKLEGDINHGVAYYKKALYYNWHYADAMYNLGVAYGEMLKFDMAIVFYELAFHFNPHC 332
Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
+ I + N + + +G Y +G+ AA +
Sbjct: 333 AEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAASMIEK 392
Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
+ EA L Y + A E + P
Sbjct: 393 AIVANPTY---AEAYNNLGVLYRDAGNISLAIEAYEQCLKIDPDSR 435
>gi|157374998|ref|YP_001473598.1| TPR repeat-containing protein [Shewanella sediminis HAW-EB3]
gi|157317372|gb|ABV36470.1| tetratricopeptide TPR_2 repeat protein [Shewanella sediminis
HAW-EB3]
Length = 242
Score = 37.9 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 31/79 (39%), Gaps = 2/79 (2%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
LK+ +Y AIP F + Y ++ +A A L + A++
Sbjct: 125 YEHAVNLVLKQRKYDEAIPAFSDFIKQYPNSTYAANANYWLGQLLYNKGEFVTAKKAFET 184
Query: 253 IQERYPQGYWARYVETLVK 271
+ ++ + + ++LVK
Sbjct: 185 VVNQFSESN--KRGDSLVK 201
>gi|86610308|ref|YP_479070.1| TPR repeat-containing protein [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86558850|gb|ABD03807.1| tetratricopeptide repeat protein [Synechococcus sp.
JA-2-3B'a(2-13)]
Length = 289
Score = 37.9 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 22/202 (10%), Positives = 54/202 (26%), Gaps = 34/202 (16%)
Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
++E+A + +F++A + Q + P + A +
Sbjct: 60 DRLFEEAFAATQRGDFARAEALWTQLLQIQPDNPALWSNRGN--------------ARVS 105
Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
+ + E + + R+++ N
Sbjct: 106 QHQLQAALEDYAEAIRLAPEAPDPYLNRGTALEGLGRWQEAIADYERVLQLDPN------ 159
Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
AA G G++ A+ ++ D A +A L +
Sbjct: 160 -----------DAAAYNNRGNAEAGLGQWQQALADYRRATELAPDYAFA-QANYAL--SL 205
Query: 238 VALALMDEAREVVSLIQERYPQ 259
+ + A ++ + +YP+
Sbjct: 206 YQVGETEAALRLMRALVRKYPK 227
>gi|78223197|ref|YP_384944.1| hypothetical protein Gmet_1990 [Geobacter metallireducens GS-15]
gi|78194452|gb|ABB32219.1| conserved hypothetical protein [Geobacter metallireducens GS-15]
Length = 175
Score = 37.9 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 13/48 (27%), Positives = 21/48 (43%), Gaps = 4/48 (8%)
Query: 226 AEEAMARLVEAYV--ALALMDEAR--EVVSLIQERYPQGYWARYVETL 269
+EA+ RL + L D A + + +Q+ YP WA +L
Sbjct: 70 TDEALFRLALLSMPSDLNREDLANAVKYLERLQKEYPVSPWATQSSSL 117
>gi|292493243|ref|YP_003528682.1| PEP-CTERM system TPR-repeat lipoprotein [Nitrosococcus halophilus
Nc4]
gi|291581838|gb|ADE16295.1| PEP-CTERM system TPR-repeat lipoprotein [Nitrosococcus halophilus
Nc4]
Length = 930
Score = 37.9 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 23/221 (10%), Positives = 60/221 (27%), Gaps = 2/221 (0%)
Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF-AGVARKSLLMS 100
+ +++ + + +L F KA + ++ P A ++
Sbjct: 121 TDASTNYPGLSENERAELLALQGHAYLGLHEFEKAEKLYDSALSLQPNVAEANLGKAEIA 180
Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
A + + + + P + + G + A
Sbjct: 181 AAQKRFDKAREWLDKILQTSPAFAPAWSLLGDLERYQGNAEAAEQAYGEAITHRFNNAED 240
Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220
++R + R Y T+ + + V L + A +
Sbjct: 241 LLNRTLIRIYLKNYEGATDDLGTLKKQGVNHPGVAYTEGLLDFQQNKYADALAAFQKSLR 300
Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
++++ A+ +Y +A + +S R+P
Sbjct: 301 QNSKYMP-AVFYAGLSYYMQGQFKQAEQHLSQFLARFPHSD 340
>gi|194335407|ref|YP_002017201.1| TPR repeat-containing protein [Pelodictyon phaeoclathratiforme
BU-1]
gi|194307884|gb|ACF42584.1| TPR repeat-containing protein [Pelodictyon phaeoclathratiforme
BU-1]
Length = 793
Score = 37.9 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 22/215 (10%), Positives = 60/215 (27%), Gaps = 6/215 (2%)
Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99
+ ++ D + E+++K +K++++ A ++F+ + + S L+
Sbjct: 449 SVTESKKDINEGVDRKAVIELFKKGCQLVKDKDYETAIQFFDHIIKRYKDRTEVEISSLV 508
Query: 100 SAFVQYSAGKYQQA----ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
+ + + ++ S + +S +
Sbjct: 509 VSALFNKGVILHKLARENEAIKTYEELIVTYSNRYEVEIAEWVVSAMFNKVTALWTLNRK 568
Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
++ +V +Y V+ A + NQ + + +
Sbjct: 569 DELIHAYEELVIKYRKRTEVEIAEWIAKALFNQG--FVLSSLNREDEGIHKYEELVGLYG 626
Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
+E A+ + L EA V
Sbjct: 627 TRHEAEISERVVRALFNKGVLLLQLERYQEAEPVF 661
>gi|193212310|ref|YP_001998263.1| tol-pal system protein YbgF [Chlorobaculum parvum NCIB 8327]
gi|193085787|gb|ACF11063.1| tol-pal system protein YbgF [Chlorobaculum parvum NCIB 8327]
Length = 263
Score = 37.9 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 29/263 (11%), Positives = 81/263 (30%), Gaps = 13/263 (4%)
Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEK--AVLFLKEQNFSK 75
+ K + F + L Q+ V+ ++ + + ++ A + + + +
Sbjct: 1 MMKKRS---FLFLPFVLLSACASQNDLSYVQGQVSQLKQESQTIKQQSAGSYSEMTQYRE 57
Query: 76 AYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132
+ + + R + S V + + A + + PE ++
Sbjct: 58 DIARLRGSINELQYNYQSAMKRLDMEDSLQVSKTNELENRIARIEKYIGLASPEGQSNTP 117
Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG-----RN 187
+ +V + + +S + Y +
Sbjct: 118 LPPVVKAPVQPGVPVSKPSASEASMSENLLSEGLLLMEKKDYNSARERFKEFMSKNPNSP 177
Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
+++ + + Y + Y AI +Q+V+A Y+ + A+ + A+ + A+
Sbjct: 178 KVSDAQFYLAESYYEEQWYEKAILEYQVVIAKYTKSAKRPAALYKQGLAFEQIGDKANAK 237
Query: 248 EVVSLIQERYPQGYWARYVETLV 270
+ Y + AR + +
Sbjct: 238 ARYRDVVNLYSKTPEARLAKKKM 260
>gi|325264830|ref|ZP_08131558.1| putative periplasmic binding protein [Clostridium sp. D5]
gi|324029819|gb|EGB91106.1| putative periplasmic binding protein [Clostridium sp. D5]
Length = 363
Score = 37.9 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 27/253 (10%), Positives = 66/253 (26%), Gaps = 20/253 (7%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K + + V L + ++ + + E ++ L E KA +
Sbjct: 1 MKKGIAALLCATMVLGLTACGSDT-KETSGEKKAEASPASE--NQSQLASDEA-VKKASD 56
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+ + + + + +++ + I +++ V+ +
Sbjct: 57 EGWEIAVVPKDSTNPWFVRMDTGVEEFADTTGVNCYQIDTGEIDATHQAQMVEDLIAQGV 116
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
+ + DV K ++ A +
Sbjct: 117 DAICVVPVDVESMDVVLKKAQDAGIVVIAHEGAELKNVDYDIEAFSNAGYGAFIMQNLAE 176
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE------------A 246
+ G Y + N E A+ A+ E Y + L++E A
Sbjct: 177 AMGEEGVYTTMVASLTNGSHN----EWADAAVEYQKENYPKMTLLEENPRVESDDNGDTA 232
Query: 247 REVVSLIQERYPQ 259
+ + YP
Sbjct: 233 YNAAKELIKTYPD 245
>gi|296273862|ref|YP_003656493.1| tetratricopeptide repeat-containing protein [Arcobacter
nitrofigilis DSM 7299]
gi|296098036|gb|ADG93986.1| Tetratricopeptide TPR_2 repeat protein [Arcobacter nitrofigilis DSM
7299]
Length = 331
Score = 37.9 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 13/103 (12%), Positives = 29/103 (28%)
Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
+ + + + A +G + R +Y AI F+ Y A+
Sbjct: 223 LFKIDYFTKAIPMFEGLIAANYKPAESNYYLGEIWYYRKDYDKAISYFKKSALLYDKADW 282
Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
+ ++ A + YP+ A+ +
Sbjct: 283 MPSLLLHSAISFEKTGDFKNAASFYETLMSNYPESKEAKSADK 325
>gi|282897129|ref|ZP_06305131.1| TPR repeat protein [Raphidiopsis brookii D9]
gi|281197781|gb|EFA72675.1| TPR repeat protein [Raphidiopsis brookii D9]
Length = 1279
Score = 37.9 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 26/200 (13%), Positives = 54/200 (27%), Gaps = 8/200 (4%)
Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
+ Y + Y + + + A + + Q ++ + S G Q
Sbjct: 507 NPNYAQAYYGRGIARFNLGDKQGAIDDYTQALNIN---PNYAQAYYNRGIARTSLGDKQG 563
Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
A + + P Y + +V V +A + + R
Sbjct: 564 AVDDYTQALNINPNYDQAYYAWGMVCSELGDKPGAVNNYTQALNINPDDPETYIARGLTR 623
Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD----AEHAEE 228
+ + + L Y RG + I +Q + +Y+ + +
Sbjct: 624 SELGDNQGAIDDYTQALNLNPDY-AYIYNNRGVVRSDIADYQRAIDDYTQALNISPDYAD 682
Query: 229 AMARLVEAYVALALMDEARE 248
A AY L A +
Sbjct: 683 AYYNRGIAYYDLGNYQSAID 702
Score = 37.1 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 22/219 (10%), Positives = 49/219 (22%), Gaps = 11/219 (5%)
Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
Y Y + + + N+ A + + + P + + +
Sbjct: 678 PDYADAYYNRGIAYYDLGNYQSAIDDYTRSIEIKPNCADTYVGRGTALYKLGDSQGAIND 737
Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY---DQRATKLMLQYMSRIVERYT 170
+ Y ++ N + Y I D + +
Sbjct: 738 FHHALDIDASYADAYNNRGIVRYELGDYQGAINDFNHALNINPNYAQAYNNRGIVRYELR 797
Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
++ + + A G + GE AI F + + E+
Sbjct: 798 DNQGAMEDFNHAVNINSNYAQAYNNRGIVRICLGERQLAIEDFSQAIIIAYNYT---ESY 854
Query: 231 ARLVEAYVALALMDEA-REVVSLIQERYPQGYWARYVET 268
A L +A + + P
Sbjct: 855 INRGYARYELGNRQKAIEDFNQALNIN-PN---YAQAYN 889
>gi|94967477|ref|YP_589525.1| TPR repeat-containing protein [Candidatus Koribacter versatilis
Ellin345]
gi|94549527|gb|ABF39451.1| Tetratricopeptide repeat protein [Candidatus Koribacter versatilis
Ellin345]
Length = 377
Score = 37.9 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 19/192 (9%), Positives = 48/192 (25%)
Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
A L +N+ A E F Q S P + + + +
Sbjct: 164 AQSCLSARNYDCALEEFRQISAQNPQSAAVHMLTGEALDGTGHTAAAIEEFKAAVNISPR 223
Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
P + Y + + + + + ++ A ++
Sbjct: 224 EPNLHFGLGYLFWKSHQYDDAKAEFEKELAIDSDHALALGYLGDIAMKQNRLEEASKFLR 283
Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243
+ + E + + +A +L L
Sbjct: 284 KAISAKPDLRMAYVDLGSVLTEQKQYEEAMEALKHAIKLDPSQPDAHFKLGRVLQRLGRS 343
Query: 244 DEAREVVSLIQE 255
+E+R+ ++ ++E
Sbjct: 344 EESRKELAKVRE 355
>gi|5453980|ref|NP_006251.1| dnaJ homolog subfamily C member 3 precursor [Homo sapiens]
gi|73620807|sp|Q13217|DNJC3_HUMAN RecName: Full=DnaJ homolog subfamily C member 3; AltName:
Full=Interferon-induced, double-stranded RNA-activated
protein kinase inhibitor; AltName: Full=Protein kinase
inhibitor of 58 kDa; Short=Protein kinase inhibitor p58;
Flags: Precursor
gi|1353270|gb|AAC50502.1| p58 [Homo sapiens]
gi|37574015|gb|AAH47936.2| DnaJ (Hsp40) homolog, subfamily C, member 3 [Homo sapiens]
gi|54781373|gb|AAV40838.1| DnaJ (Hsp40) homolog, subfamily C, member 3 [Homo sapiens]
gi|55661851|emb|CAH70090.1| DnaJ (Hsp40) homolog, subfamily C, member 3 [Homo sapiens]
gi|119629364|gb|EAX08959.1| DnaJ (Hsp40) homolog, subfamily C, member 3 [Homo sapiens]
gi|158259355|dbj|BAF85636.1| unnamed protein product [Homo sapiens]
gi|168277460|dbj|BAG10708.1| DnaJ homolog, subfamily C, member 3 [synthetic construct]
gi|189053547|dbj|BAG35713.1| unnamed protein product [Homo sapiens]
Length = 504
Score = 37.9 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 22/258 (8%), Positives = 66/258 (25%), Gaps = 20/258 (7%)
Query: 34 FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93
L ++ + + + +A+ +++ A + ++ +
Sbjct: 131 VLKSNPSENEEKEAQSQLIKSDEMQRLRSQALNAFGSGDYTAAIAFLDKILEVCVWDAEL 190
Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153
R+ + K + E+ Y + + +V +
Sbjct: 191 RELRAECFIKEGEPRKAISDLKAASKLKNDNTEAFYKISTLYYQLGDHELSLSEVRECLK 250
Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK----------- 202
+ + + + + ++ A + GR A + E
Sbjct: 251 LDQDHKRCFAHYKQVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPSIAEYTVRSKE 310
Query: 203 -----RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA-REVVSLIQER 256
+ + ++ A+ EAY+ + DEA ++ + +
Sbjct: 311 RICHCFSKDEKPVEAIRVCSEVLQMEPDNVNALKDRAEAYLIEEMYDEAIQDYETAQEHN 370
Query: 257 YPQGYWA---RYVETLVK 271
+ L+K
Sbjct: 371 ENDQQIREGLEKAQRLLK 388
>gi|304321214|ref|YP_003854857.1| hypothetical protein PB2503_08299 [Parvularcula bermudensis
HTCC2503]
gi|303300116|gb|ADM09715.1| hypothetical protein PB2503_08299 [Parvularcula bermudensis
HTCC2503]
Length = 296
Score = 37.9 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 19/72 (26%), Positives = 33/72 (45%)
Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
Q A + +G YL G A F + Y D A EA +L +++ L +EA
Sbjct: 206 QTADAKYLLGDVYLATGANGEAARIFLDHVRTYRDDPKAPEAYLKLGKSFSLLNRPEEAC 265
Query: 248 EVVSLIQERYPQ 259
V++ ++++P
Sbjct: 266 RVLTAGEQKFPD 277
>gi|326336387|ref|ZP_08202558.1| TPR-domain containing protein [Capnocytophaga sp. oral taxon 338
str. F0234]
gi|325691561|gb|EGD33529.1| TPR-domain containing protein [Capnocytophaga sp. oral taxon 338
str. F0234]
Length = 995
Score = 37.9 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 27/214 (12%), Positives = 55/214 (25%), Gaps = 13/214 (6%)
Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF----------AGVARK 95
S + YQ+ + A+ + N+ +A YF + +
Sbjct: 412 EKSTSADEKIYQKVAFFYALQLYADGNYKEALSYFQKAQGKSNELLRARAIYWSGETHYQ 471
Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
+ + EY Y + + + + A+
Sbjct: 472 LQQYAEAQKDFHDFLSLGLKSAPEYPNAYYGLGYALFNQKKYLEATENFSKYIETKPTAS 531
Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA---AKEVEIGRYYLKRGEYVAAIPR 212
+L ++ + Y Y V + + Y I
Sbjct: 532 RLADAHLRLADSYFAIGKYWPAMENYNKVMTINVGDTDYAAFQKAISYGIVDRVPKKIEE 591
Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
+ NY + E+A+ L YVA ++A
Sbjct: 592 LNAFIKNYPKSNLREDAIYELANTYVAQGNNEKA 625
Score = 37.1 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 19/203 (9%), Positives = 47/203 (23%), Gaps = 10/203 (4%)
Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK------ 109
++Y + K++++ KA FN+ L ++ + +
Sbjct: 278 TNTDLYYLGYAYYKQKDYQKAIGQFNRIIDGKNEVAQNAYYHLAECYLNTNQKQQALNAF 337
Query: 110 ----YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
++ + + Y T+ + + +
Sbjct: 338 RNASQMNFVPEIKKDAHLNYARLSYEVGNAYESTPEVIQSYMETYPNDHTQELKELLVDS 397
Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
N T ++ K L + S+
Sbjct: 398 YITSGNFQSAMNLLEKSTSADEKIYQKVAFFYALQLYADGNYKEALSYFQKAQGKSNELL 457
Query: 226 AEEAMARLVEAYVALALMDEARE 248
A+ E + L EA++
Sbjct: 458 RARAIYWSGETHYQLQQYAEAQK 480
Score = 35.9 bits (80), Expect = 5.4, Method: Composition-based stats.
Identities = 30/216 (13%), Positives = 59/216 (27%), Gaps = 24/216 (11%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
+ Y Y ++ + +A E F++ P A + L A ++ GKY
Sbjct: 491 KSAPEYPNAYYGLGYALFNQKKYLEATENFSKYIETKPTASRLADAHLRLADSYFAIGKY 550
Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
A + +T + + + ++ ++ ++ Y
Sbjct: 551 WPAMENYNKVMTINVGDTDYAAFQKAISYGIVDRVP----------KKIEELNAFIKNYP 600
Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
S + A + + E Y + +Y + AM
Sbjct: 601 KSNLREDAIYELANTYVAQGNNEKAAALYQQLQNQYQGGT--------------YTARAM 646
Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
R +A V I E+YP A
Sbjct: 647 LREGLMLYNKNENQKALTVFRKITEKYPNSPEAMQA 682
>gi|317402472|gb|EFV83040.1| periplasmic protein [Achromobacter xylosoxidans C54]
Length = 230
Score = 37.9 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 11/79 (13%), Positives = 30/79 (37%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ +G ++ AI + ++ D A +A+ + + + + A+ +
Sbjct: 149 QFYLGSSRYALKDFKGAIEQLNAMVQKAPDNARAPDALLVIAGSQIEMNNRAGAKTTLQR 208
Query: 253 IQERYPQGYWARYVETLVK 271
I YP A ++ ++
Sbjct: 209 IVRDYPTTPAANTAKSRLQ 227
>gi|206970282|ref|ZP_03231235.1| D-methionine ABC transporter, periplasmic D-methionine-binding
protein [Bacillus cereus AH1134]
gi|229181283|ref|ZP_04308613.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
cereus 172560W]
gi|206734859|gb|EDZ52028.1| D-methionine ABC transporter, periplasmic D-methionine-binding
protein [Bacillus cereus AH1134]
gi|228602176|gb|EEK59667.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
cereus 172560W]
Length = 270
Score = 37.9 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 12/70 (17%), Positives = 22/70 (31%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K LT S ++ L + + L E+ EKA L+++ +
Sbjct: 1 MKKLLLTALISTSIFGLAACGGKDKDEKKLVVGASNVPHAEILEKAKPLLEKKGIELEVK 60
Query: 79 YFNQCSRDFP 88
F
Sbjct: 61 KFQDYVLPNK 70
>gi|325474460|gb|EGC77647.1| TPR domain-containing protein [Treponema denticola F0402]
Length = 242
Score = 37.9 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 11/58 (18%), Positives = 24/58 (41%)
Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
+ + + A+ Y AL+ ++A + + E+YPQ WA ++ +
Sbjct: 176 YYERASKVENFPLIPRALFNTGRLYEALSKKEDAILSYNRLLEKYPQNEWALLAKSRI 233
>gi|163751255|ref|ZP_02158483.1| hypothetical protein KT99_13937 [Shewanella benthica KT99]
gi|161328969|gb|EDQ00043.1| hypothetical protein KT99_13937 [Shewanella benthica KT99]
Length = 231
Score = 37.9 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 32/79 (40%), Gaps = 2/79 (2%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
LK+ +Y AIP F + Y ++ +A A L + + + A++
Sbjct: 114 YEHAVNLVLKQRKYEEAIPAFSGFIKQYPESTYAANANYWLGQLLYNKSDFEPAKQAFET 173
Query: 253 IQERYPQGYWARYVETLVK 271
+ R+ + ++LVK
Sbjct: 174 VVNRFKDSN--KRADSLVK 190
>gi|328952032|ref|YP_004369366.1| Tetratricopeptide TPR_2 repeat-containing protein [Desulfobacca
acetoxidans DSM 11109]
gi|328452356|gb|AEB08185.1| Tetratricopeptide TPR_2 repeat-containing protein [Desulfobacca
acetoxidans DSM 11109]
Length = 599
Score = 37.9 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 28/255 (10%), Positives = 67/255 (26%), Gaps = 15/255 (5%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRD------VYLDSVTDVRYQREVYE---KAVLFLK 69
+ F + + G + D ++ +E Y+ A +L
Sbjct: 22 IQSFKCLLLILATALVMSGCQSLPPADSARIPGKIDRLPPTIQSPKEAYKHYLNAQYYLF 81
Query: 70 EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK---YQQAASLGEEYITQYPE 126
N A + + P + + + + + + A + + +
Sbjct: 82 TGNLEDALRSYEAAIQCDPKSAQLEIEMAALLIRKGDIKEALAHLEKAISLDPNHLEAHQ 141
Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
+ + A + + +++ + + N +
Sbjct: 142 LLAGLHTGMNQLREATTEYEKIITLDPANEEAVIFLATLHAQQGNCAKAVNLLKNLIKKN 201
Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
+G+ Y++ G+ AA FQ L + AM L Y +A
Sbjct: 202 PDQFIALFYLGKCYIELGQLTAAKKEFQQALHKQPEFL---PAMLELGFVYELEKRYSQA 258
Query: 247 REVVSLIQERYPQGY 261
+ + I P
Sbjct: 259 KTMYRRILRHDPDNQ 273
>gi|319792174|ref|YP_004153814.1| hypothetical protein Varpa_1488 [Variovorax paradoxus EPS]
gi|315594637|gb|ADU35703.1| hypothetical protein Varpa_1488 [Variovorax paradoxus EPS]
Length = 436
Score = 37.9 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 17/95 (17%), Positives = 33/95 (34%), Gaps = 1/95 (1%)
Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
R A + + R + G+ A + + E +A A
Sbjct: 336 CREKDKAFSLDDAVMVIAMARAEWRNGDAHATLALLSGFDRRFRGNEAIPQAYELAARAL 395
Query: 238 VA-LALMDEAREVVSLIQERYPQGYWARYVETLVK 271
V L D A+ +++ ++ RYP + V L++
Sbjct: 396 VQGLGRADMAQPILTTMESRYPNSEQTQEVRWLLR 430
>gi|253996237|ref|YP_003048301.1| type IV pilus biogenesis/stability protein PilW [Methylotenera
mobilis JLW8]
gi|253982916|gb|ACT47774.1| type IV pilus biogenesis/stability protein PilW [Methylotenera
mobilis JLW8]
Length = 270
Score = 37.9 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 29/247 (11%), Positives = 67/247 (27%), Gaps = 11/247 (4%)
Query: 27 FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86
F ++ + QS D+ R + ++L+++N A + F ++
Sbjct: 28 FVAVLALLMTACVTQS--QQANDNGASKARARAHSDLGSVYLQQRNLEVALDEFTIATKI 85
Query: 87 FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY-----YLVGMSY 141
P + +A L M + + + ES N + +
Sbjct: 86 DPSSAMAYNGLGMVHSALGQDALAEASFKQAVQIEPNNSESHNNFGNFLCSRGRVDESIK 145
Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
M + R + + L + ++
Sbjct: 146 EFMAAVKNPLYATPAIAYTNAGVCSLRKQDVRNAEVYFQRALQLEPLLHSAAYQLALIQF 205
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
R + A Q + + E + V L D+ ++ +YP
Sbjct: 206 NRNDVANARNTLQNAMLSRPG----PELLWLSVRVARLLGNHDDESSYALELRRQYPDSE 261
Query: 262 WARYVET 268
A+ +++
Sbjct: 262 QAKLLQS 268
>gi|145297816|ref|YP_001140657.1| hypothetical protein ASA_0747 [Aeromonas salmonicida subsp.
salmonicida A449]
gi|142850588|gb|ABO88909.1| conserved hypothetical protein [Aeromonas salmonicida subsp.
salmonicida A449]
Length = 255
Score = 37.9 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 26/79 (32%), Gaps = 2/79 (2%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
LK Y AIP F+ + Y + + A L + A S
Sbjct: 138 YDAAVNMVLKDKNYDKAIPAFEGFIKQYPSSSYVPNAHYWLGQLLFNKGDRTGAAAQFST 197
Query: 253 IQERYPQGYWARYVETLVK 271
+ ++ + + + L+K
Sbjct: 198 VANKFSKSP--KRADGLLK 214
Score = 37.1 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 21/198 (10%), Positives = 55/198 (27%), Gaps = 14/198 (7%)
Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
+A L + + + + + + + A+
Sbjct: 59 QAELQQQVDSLQGEVSELRGQLEQQTYQMEQSQERQRQLYQELDKVANSKPAAAPATPAA 118
Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
+ +Y L ++ + + +++Y +S YV A +++
Sbjct: 119 GASAAPAANYSANLDENQAYDAAVNMVLKDKNYDKAIPAFEGFIKQYPSSSYVPNAHYWL 178
Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242
G+ +G+ A +F V +S + + + +L
Sbjct: 179 --------------GQLLFNKGDRTGAAAQFSTVANKFSKSPKRADGLLKLGMLAQLDGK 224
Query: 243 MDEAREVVSLIQERYPQG 260
EA+ + + YP
Sbjct: 225 KAEAKTFYEQVIKGYPNT 242
>gi|222055474|ref|YP_002537836.1| hypothetical protein Geob_2381 [Geobacter sp. FRC-32]
gi|221564763|gb|ACM20735.1| conserved hypothetical protein [Geobacter sp. FRC-32]
Length = 171
Score = 37.9 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 11/49 (22%), Positives = 22/49 (44%), Gaps = 4/49 (8%)
Query: 226 AEEAMARLVEAYVALALM----DEAREVVSLIQERYPQGYWARYVETLV 270
+EA+ RL + ++ +++ + + +Q YP W R LV
Sbjct: 65 TDEALFRLSLIQLKAGIVREDMEQSLKRLETLQRDYPSSPWTRLSVPLV 113
>gi|229062653|ref|ZP_04199962.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
cereus AH603]
gi|228716623|gb|EEL68320.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
cereus AH603]
Length = 270
Score = 37.9 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 12/70 (17%), Positives = 22/70 (31%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K LT S ++ L + + L E+ EKA L+++ +
Sbjct: 1 MKKLLLTALISTSIFGLAACGGKDKDEKKLVVGASNVPHAEILEKAKPLLEKKGIELEIK 60
Query: 79 YFNQCSRDFP 88
F
Sbjct: 61 KFQDYVLPNK 70
>gi|158522421|ref|YP_001530291.1| TPR repeat-containing protein [Desulfococcus oleovorans Hxd3]
gi|158511247|gb|ABW68214.1| Tetratricopeptide TPR_2 repeat protein [Desulfococcus oleovorans
Hxd3]
Length = 648
Score = 37.9 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 27/184 (14%), Positives = 51/184 (27%), Gaps = 5/184 (2%)
Query: 71 QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI--TQYPESK 128
N+ KA +FN+ +P +A ++ + + +
Sbjct: 436 GNYEKAIAHFNKSLSIYPTNVMAHLNIKGVSKKLTGQTTGPLLYAGEPGRPRLMAWDNRL 495
Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
+ + V +++ER A
Sbjct: 496 ATVMTRLGWDKAANHYYQKVMAVDPRNAEAHYGTGQLLERQGKIDAAITAYETTLDIDPL 555
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
+G+ +L R EY AI RF ++L EA +L +Y ++ A
Sbjct: 556 YTDVYQRLGKIHLTRNEYEKAIDRFFMLLKI---DPFRAEAFEQLGLSYYHTGDLENAIR 612
Query: 249 VVSL 252
L
Sbjct: 613 AYRL 616
>gi|157737822|ref|YP_001490506.1| hypothetical protein Abu_1588 [Arcobacter butzleri RM4018]
gi|157699676|gb|ABV67836.1| conserved hypothetical protein [Arcobacter butzleri RM4018]
Length = 314
Score = 37.9 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 15/92 (16%), Positives = 32/92 (34%)
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
+ + A +G + KR +Y AI F+ A + + ++
Sbjct: 220 YEKLIEVNYKPAENNFYLGEMWYKRKKYDTAISHFKKSAMLNDKAAYMPTLLLHSAISFE 279
Query: 239 ALALMDEAREVVSLIQERYPQGYWARYVETLV 270
+ + A+ + E YP A+ +T +
Sbjct: 280 NVKDKENAKSFYGTLIELYPNSSEAKEAKTKL 311
>gi|328776415|ref|XP_003249162.1| PREDICTED: SET and MYND domain-containing protein 4-like [Apis
mellifera]
Length = 714
Score = 37.9 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 7/50 (14%), Positives = 18/50 (36%)
Query: 34 FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
+ + + VR ++Y + ++++ KA E F +
Sbjct: 626 SIFECSSCRRKIDLRKPLDHVRECEQLYARGFEAMEKEQPEKALEAFFEA 675
>gi|223039415|ref|ZP_03609703.1| tetratricopeptide repeat domain protein [Campylobacter rectus
RM3267]
gi|222879211|gb|EEF14304.1| tetratricopeptide repeat domain protein [Campylobacter rectus
RM3267]
Length = 790
Score = 37.9 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 15/172 (8%), Positives = 43/172 (25%), Gaps = 5/172 (2%)
Query: 95 KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
++L + + + + YD +
Sbjct: 129 QNLSEFKKQTNAGVNFAPIFERMISPSVGPLDLNKAPIENSDSNDINMYLDVKKSYDAKR 188
Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
+ + RY NS + Y +++ +
Sbjct: 189 YDDAIATSQTALRRYANSIFASEFLLYRLRALDKILDSQNSFEGSDAADIASEGRAWM-- 246
Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
+ E+ E + + +AY+ L+ +A + ++ +P + +
Sbjct: 247 ---RRFVSDENYPEVLYLVTKAYLKQELVSDANYTLDILINEHPNSNFTKLA 295
>gi|319650478|ref|ZP_08004618.1| amino acid ABC transporter [Bacillus sp. 2_A_57_CT2]
gi|317397659|gb|EFV78357.1| amino acid ABC transporter [Bacillus sp. 2_A_57_CT2]
Length = 273
Score = 37.9 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 6/49 (12%), Positives = 15/49 (30%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLF 67
+ K T V + G + D ++++++K
Sbjct: 1 MKKTLFTAVLICFVLIISGCGTNKANPDNQDQPASEEQEQDLWKKVQDE 49
>gi|260909574|ref|ZP_05916276.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str.
F0295]
gi|260636310|gb|EEX54298.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str.
F0295]
Length = 1126
Score = 37.9 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 10/72 (13%), Positives = 24/72 (33%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ K + + + + NY + + L Y+ A+ V L
Sbjct: 591 FHSGVIFKDKLDQLGLSEKALRRLTDNYPQFDKMPQVYYHLFLLYMRKGDKATAQRYVDL 650
Query: 253 IQERYPQGYWAR 264
++++YP+
Sbjct: 651 LKQQYPKHELTE 662
>gi|119513238|ref|ZP_01632282.1| TPR repeat protein [Nodularia spumigena CCY9414]
gi|119462105|gb|EAW43098.1| TPR repeat protein [Nodularia spumigena CCY9414]
Length = 727
Score = 37.9 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 22/194 (11%), Positives = 54/194 (27%), Gaps = 18/194 (9%)
Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
D + Y+ + +++ +A + F+Q P + A + + +
Sbjct: 446 KPPEDTLSFADYYKAGHAAYQIRDYDQAVKKFSQAIEQQPTSSRAYVNRGNARYNLRDYE 505
Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
++Y + + G + M R +L + ++ +
Sbjct: 506 G------ALKDYNQALEINPEEVKAFVNRGNARYMMAEYSHDPDREYQLAIADFNQALGI 559
Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
A + R+++A E + Y + + R E
Sbjct: 560 NKQE---IEAYIRRGIVRSKMARYSSESVQVYQQAIVDLTQAIRLNAS---------RAE 607
Query: 229 AMARLVEAYVALAL 242
A + E +A
Sbjct: 608 AYFQRGEIRYKMAQ 621
>gi|281422465|ref|ZP_06253464.1| putative TPR domain protein [Prevotella copri DSM 18205]
gi|281403448|gb|EFB34128.1| putative TPR domain protein [Prevotella copri DSM 18205]
Length = 1037
Score = 37.9 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 16/184 (8%), Positives = 44/184 (23%), Gaps = 2/184 (1%)
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
F + + ++ A + K + + + +
Sbjct: 506 FGNANTWYFYSQSAVAQGKQQFERLWGKRKNIDNWQRSNQTVVADTKGVEEMTDEQRDSL 565
Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
+ + ++ + + P + +
Sbjct: 566 LNEAQKKALEKEKEKNLSAEEDPHQRAYYLAQIPLTEEKMAESNQILDDGLLH--AGIIL 623
Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
K + + Q ++ + EH ++A L Y A + L++ YP+
Sbjct: 624 KDKLNDLDESERMLQRLVKKNAAYEHLDDAYYHLYLLYNIRKQPAIASRYLDLLKANYPE 683
Query: 260 GYWA 263
W
Sbjct: 684 SQWT 687
>gi|196005799|ref|XP_002112766.1| hypothetical protein TRIADDRAFT_56242 [Trichoplax adhaerens]
gi|190584807|gb|EDV24876.1| hypothetical protein TRIADDRAFT_56242 [Trichoplax adhaerens]
Length = 802
Score = 37.9 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 27/224 (12%), Positives = 58/224 (25%), Gaps = 6/224 (2%)
Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99
+ + L +D + K + + KA EY+ + A +L +
Sbjct: 453 SLAEKYSDLAITSDRYNPNAMVNKGNCLFTAKEYEKAQEYYKEALNVEASCVEALYNLGL 512
Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD---QRATK 156
+ + + I P Y + + Q I
Sbjct: 513 TKKMLNCPEESLDCFLKLHGIIRNDPMILVQIAELYEILDDFHQAIDWYTQVLTLAPTDA 572
Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
+L + + + + IG YY++ AI F
Sbjct: 573 SLLAKLGALYDSQGDKSQAFQYYLESYRYYPSNIETISWIGSYYIESQFCEKAISYFDKA 632
Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
+ + + Y + + A + I E++P+
Sbjct: 633 SMIQPNEVKWQ---LMVASCYRIIGNYNRALDKYKQIHEKFPEN 673
>gi|197116602|ref|YP_002137029.1| lipoprotein [Geobacter bemidjiensis Bem]
gi|197085962|gb|ACH37233.1| lipoprotein, putative [Geobacter bemidjiensis Bem]
Length = 167
Score = 37.9 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 9/48 (18%), Positives = 22/48 (45%), Gaps = 4/48 (8%)
Query: 226 AEEAMARLVEAYVALALM----DEAREVVSLIQERYPQGYWARYVETL 269
++A+ RL + L +A++++ + + YP+ W + L
Sbjct: 70 TDQALFRLALLTLKPGLERPASAQAQQLLKRLAKEYPKSPWTAQADHL 117
>gi|150397823|ref|YP_001328290.1| Tol-Pal system YbgF [Sinorhizobium medicae WSM419]
gi|150029338|gb|ABR61455.1| Tol-Pal system YbgF [Sinorhizobium medicae WSM419]
Length = 345
Score = 37.9 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 15/73 (20%), Positives = 31/73 (42%)
Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
++ A +G +G+Y A F ++ + A E + +L + AL + A
Sbjct: 255 DKAADASFWMGEAQYSQGKYSDAAKTFLNAHQSHGKSPKAPEMLLKLGMSLGALDNKETA 314
Query: 247 REVVSLIQERYPQ 259
+ + +RYP+
Sbjct: 315 CATLREVGKRYPK 327
>gi|55963435|emb|CAI11655.1| novel protein similar to H.sapiens TMTC2, transmembrane and
tetratricopeptide repeat containing 2 (TMTC2) [Danio
rerio]
Length = 816
Score = 37.9 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 21/226 (9%), Positives = 48/226 (21%), Gaps = 10/226 (4%)
Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
++ +Y L + +A + + R P +
Sbjct: 567 CADIPDENLKDPHAHKSSVTSCLYNLGKLLHDQGQHEEALSVYKEAVRKMPRQFAPQSLY 626
Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK- 156
M ++A E + P+ Y + Q Y +A +
Sbjct: 627 NMMGEAYMRLNILEEAGHWYRESLKAKPDHIPAHLTYGKLLSIMGQKSEAERYFLKAIEL 686
Query: 157 -----LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
+ + + + N+ + A
Sbjct: 687 DPARGNCYMHYGQFLLEESRLAEAAAMAQKAAELDNEEFDVVFSAAHMLRQASLNEEAET 746
Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR-EVVSLIQER 256
+ D A+ L + EA + +Q +
Sbjct: 747 YYGKAAVLRPDHPA---ALMNLGAILHLNGKLKEAESNYLRALQLK 789
>gi|307944548|ref|ZP_07659888.1| tetratricopeptide TPR2 protein [Roseibium sp. TrichSKD4]
gi|307772297|gb|EFO31518.1| tetratricopeptide TPR2 protein [Roseibium sp. TrichSKD4]
Length = 308
Score = 37.9 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 32/79 (40%), Gaps = 2/79 (2%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ + G+Y A F+ L+NY + + A L E+ +A +A +
Sbjct: 186 DYDSAYGLAVNGDYQGAENGFRAFLSNYPGHQLSSNAQYWLGESLLAQNNYRDAADAFLK 245
Query: 253 IQERYPQGYWARYVETLVK 271
+P ++ ++L+K
Sbjct: 246 TYTDHPNS--SKSADSLLK 262
Score = 35.9 bits (80), Expect = 6.5, Method: Composition-based stats.
Identities = 10/67 (14%), Positives = 28/67 (41%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ +G L + Y A F ++ ++ + +++ +L + L +D A +
Sbjct: 223 QYWLGESLLAQNNYRDAADAFLKTYTDHPNSSKSADSLLKLGVSLRGLGEIDAACATFTE 282
Query: 253 IQERYPQ 259
+ ++P
Sbjct: 283 LLNKFPN 289
>gi|253700248|ref|YP_003021437.1| lytic transglycosylase catalytic [Geobacter sp. M21]
gi|251775098|gb|ACT17679.1| Lytic transglycosylase catalytic [Geobacter sp. M21]
Length = 709
Score = 37.9 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 24/211 (11%), Positives = 60/211 (28%), Gaps = 4/211 (1%)
Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
+ E++++ + + +A E + + A K L Y A +Y+
Sbjct: 220 VEPYTGAELFKRCGTLYGLRRYLQAAEAYAEIPLSGESAEFIAKLKLKKGQALYKARRYK 279
Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
QA + ES + + + + ++E
Sbjct: 280 QAQATFSNISGARHESDLWLARTLDKTGEQTEAFKLYMQLAQDSDSGSTGQEALLEAAYL 339
Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE--- 228
+ + + + + L A + + ++ A + E+
Sbjct: 340 KRFQRKWSEALPLFKQYLTAVHQKPSNVLWESAWASYQSRDYEDAAAQFKKLTEREDLRD 399
Query: 229 -AMARLVEAYVALALMDEAREVVSLIQERYP 258
A+ L + A A++ S + +P
Sbjct: 400 KALYWLGKTLAAAGDAKGAQQAFSTLAAEFP 430
Score = 36.7 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 25/253 (9%), Positives = 64/253 (25%), Gaps = 42/253 (16%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
++ ++ C + + + E A ++ +++ A E
Sbjct: 1 MFNRTAIAAAAVLFCTALPASAVTFK-----------PADEALASAASRMQAKDYRTAKE 49
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
++ + + AA+ E++ + Y ++
Sbjct: 50 AASKVNDKGVRS-----------------FMVGMAAARLEQWEEAAGQLATAADAYPILA 92
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
L + R++++Y S V+ A +
Sbjct: 93 DYALYYQGLSLTKLERHDQALTPLYRLLKQYPESRLVR--------------AALILYSD 138
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
G Y A + + Y + A+ L A + + I YP
Sbjct: 139 TLAAAGHYNEAQQSYSTFVERYPLGNDSISALYGSALCKEKLGDPIAAAKALRGIYLNYP 198
Query: 259 QGYWARYVETLVK 271
++ ++
Sbjct: 199 ASPFSDKSARDLQ 211
>gi|229049677|ref|ZP_04194234.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
cereus AH676]
gi|229147533|ref|ZP_04275880.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
cereus BDRD-ST24]
gi|228635959|gb|EEK92442.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
cereus BDRD-ST24]
gi|228722590|gb|EEL73978.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
cereus AH676]
Length = 273
Score = 37.9 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 12/73 (16%), Positives = 22/73 (30%)
Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
Q+ K LT S ++ L + + L + EKA L+++
Sbjct: 1 MLQMKKLLLTALISTSIFGLAACGGKDKDEKKLVVGASNVPHAVILEKAKPLLEKKGIEL 60
Query: 76 AYEYFNQCSRDFP 88
+ F
Sbjct: 61 EIKKFQDYVLPNK 73
>gi|229163963|ref|ZP_04291903.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
cereus R309803]
gi|228619584|gb|EEK76470.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
cereus R309803]
Length = 270
Score = 37.9 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 12/70 (17%), Positives = 22/70 (31%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K LT S ++ L + + L E+ EKA L+++ +
Sbjct: 1 MKKLLLTALISTSIFGLAACGGKDKDEKKLVVGASNVPHAEILEKAKPLLEKKGIELEVK 60
Query: 79 YFNQCSRDFP 88
F
Sbjct: 61 KFQDYVLPNK 70
>gi|42525153|ref|NP_970533.1| hypothetical protein Bd3829 [Bdellovibrio bacteriovorus HD100]
gi|39577364|emb|CAE81187.1| unknown protein [Bdellovibrio bacteriovorus HD100]
Length = 251
Score = 37.9 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 20/249 (8%), Positives = 62/249 (24%), Gaps = 14/249 (5%)
Query: 27 FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86
++ ++G +S+++ + V ++ + A + +
Sbjct: 5 ILALCALTMLGCASRSAQEKQKAELHLRL--------GVAHIETGAYPYALQELLKAQEL 56
Query: 87 FPFAGVARKSLLMSAF-----VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
P V + +L F Q + + + +
Sbjct: 57 DPKNPVIQNNLGQVYFFRDRLDLAEKHLRQALSLEPRYSDARNNLGRVLIEAGRYADAEK 116
Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
+ + + + + + V + GR +
Sbjct: 117 EIQLVLNDLTYGNPEKAYINLGLVKFNQKEYAAARTSFGKVMDSQTDDCIANTYYGRTFF 176
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
+ +Y A + + +E +Y L ++ + + YP G
Sbjct: 177 EEKDYGRAAEALDRAIGFCQKNLY-DEPHYYSALSYYRLGEKSKSVARFEELIKYYPTGK 235
Query: 262 WARYVETLV 270
+ + ++
Sbjct: 236 YRDKAKGML 244
>gi|317475541|ref|ZP_07934803.1| hypothetical protein HMPREF1016_01785 [Bacteroides eggerthii
1_2_48FAA]
gi|316908245|gb|EFV29937.1| hypothetical protein HMPREF1016_01785 [Bacteroides eggerthii
1_2_48FAA]
Length = 556
Score = 37.9 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 19/237 (8%), Positives = 51/237 (21%), Gaps = 11/237 (4%)
Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFS-KA 76
+ K+ + F ++ + E Y + + Y A + + + A
Sbjct: 1 MMKKYKMITFCALIAAGITSCELDEKPTSYYEKDAYFQT----YNHAKMAV-VGIYDCLA 55
Query: 77 Y-EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
+++ Q P + + + +
Sbjct: 56 IDKHYGQFEMATPASDDTYYIQGTGTDNTRRDIAHYMVKTTNTWIADLWKYKYMGIDRAN 115
Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
+ M + + R + Y F +
Sbjct: 116 YAIANIKNMEGYEEDVELQELVAQACFLRAFLAFDLIKYWGDVPFKTEYTFSYGDIANGR 175
Query: 196 IGRYYLKRGEYVAAIPRFQLVLANY----SDAEHAEEAMARLVEAYVALALMDEARE 248
+ R + + + + A A L+ Y+ A ++
Sbjct: 176 VSREEIYKSIIDDLNFAKNNLQQGNAELSPEVPSQGAAHALLMRVYLQRAGYSLQQD 232
>gi|159026094|emb|CAO86323.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 666
Score = 37.9 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 17/215 (7%), Positives = 59/215 (27%), Gaps = 6/215 (2%)
Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99
+ + + + Y+K +++ A + ++Q +
Sbjct: 411 SAAQKALEKLLTFQQNDAKIWYKKGWSLQNLEDYEGAVKAYDQALAIESDNALIWYQKGN 470
Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA---QMIRDVPYDQRATK 156
S + ++ S ++ Q+ ++ + + +
Sbjct: 471 SLYQLNKINNALESYSKAGQFNPQFSQAHYSQGIILQKLGRNSEALEAFTQATKANSNYY 530
Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
++ + + ++ + + IG + G+Y AI +Q
Sbjct: 531 QAWLNQGALLHQLERFQEAIASYEKARRISSRKSEVFIGIGNACYRLGDYSQAITAYQQA 590
Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
+ D +++ ++ L + A +
Sbjct: 591 IQRQKDNPETWKSL---GNSWFKLGQYERAIQAYQ 622
>gi|156342046|ref|XP_001620860.1| hypothetical protein NEMVEDRAFT_v1g222634 [Nematostella vectensis]
gi|156206260|gb|EDO28760.1| predicted protein [Nematostella vectensis]
Length = 1124
Score = 37.9 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 20/201 (9%), Positives = 55/201 (27%), Gaps = 16/201 (7%)
Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
+S + E+ + + N+ +A + + R + + + +
Sbjct: 263 ESGDERDQAEELMGRGRKYYDMDNYEEAIGHSKEALRLYQKTSDDQGQGKAHLLIGTTHD 322
Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
+ + Y +I + Q + + + +
Sbjct: 323 QQGKYEEAIGHYKEALR--LYQKTSDDQGQGKAHLLIGNTHDQQGKYEEAIGHYKEALRL 380
Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE- 227
Y + + IG + ++G+Y AI ++ L Y +
Sbjct: 381 YQKTS-----------DDQGQGKAHLLIGNTHDQQGKYEEAIGHYKEALRLYQKTSDDQG 429
Query: 228 --EAMARLVEAYVALALMDEA 246
+A + + + +EA
Sbjct: 430 QGKANLLIGKTHYQQGKYEEA 450
Score = 35.5 bits (79), Expect = 8.1, Method: Composition-based stats.
Identities = 19/189 (10%), Positives = 47/189 (24%), Gaps = 23/189 (12%)
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
Y++ ++ +A + + S D Y
Sbjct: 562 YQQGKYEEARGHYKEALRLYQKTSDDQGQGKAHLLIGNTHNQQGKYEEARGHYKEALRLY 621
Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
+ + +I + Y Q + + + + Y +
Sbjct: 622 QKTSDDQGQGEAH---------LLIGNTHYQQGKYEEAIGHYKEALRLYQKTS------- 665
Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE---EAMARLVEAY 237
+ IG + ++G+Y A ++ L Y + +A + +
Sbjct: 666 ----DDQGQGKAHLLIGNTHYQQGKYEEARGHYKEALRLYQKTSDDQGQGKAHLLIGNTH 721
Query: 238 VALALMDEA 246
+EA
Sbjct: 722 YQQGKYEEA 730
>gi|78065361|ref|YP_368130.1| hypothetical protein Bcep18194_A3887 [Burkholderia sp. 383]
gi|77966106|gb|ABB07486.1| conserved hypothetical protein [Burkholderia sp. 383]
Length = 249
Score = 37.9 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 14/125 (11%), Positives = 39/125 (31%), Gaps = 14/125 (11%)
Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
+ K + +Y SPY A+++ G +Y
Sbjct: 136 QQQFRNGNFKAAAASFRAFIAKYPQSPYQPTAQYW--------------YGNAQYALRDY 181
Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
+ +Q +++ + A +A+ + + A++ + +Y A+
Sbjct: 182 RGSTATWQGIVSKFPQHPRAADALVAIGTNQLEQGQKAAAKKTFEQVVSQYAGSNAAQTA 241
Query: 267 ETLVK 271
+ ++
Sbjct: 242 QGKLE 246
Score = 36.7 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 17/111 (15%), Positives = 32/111 (28%)
Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
+ +Y + R + V + + + G + AA F+
Sbjct: 94 RQQKEYYQDLDTRLKKFEPQQATIDGVEGTVQPGETDALSAAQQQFRNGNFKAAAASFRA 153
Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
+A Y + + A A AL + I ++PQ A
Sbjct: 154 FIAKYPQSPYQPTAQYWYGNAQYALRDYRGSTATWQGIVSKFPQHPRAADA 204
>gi|298242645|ref|ZP_06966452.1| TPR repeat-containing protein [Ktedonobacter racemifer DSM 44963]
gi|297555699|gb|EFH89563.1| TPR repeat-containing protein [Ktedonobacter racemifer DSM 44963]
Length = 484
Score = 37.9 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 27/219 (12%), Positives = 58/219 (26%), Gaps = 8/219 (3%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSA 107
D R Y A+ + A + + + + + +L + +
Sbjct: 63 AADPEDARARYNLALAQQYLGDTELAIAGYRRAIDLDPNLIDSYINLGNLYGEIGMYEES 122
Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
+ Q + + S Y + Q R L + + E
Sbjct: 123 LETFQQGLELDPQSDELYLSVGDTYRLQNLYRDAIQAYRQALMLNPDNTLAADNLRDVRE 182
Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
R + + + E+ L Y A+ ++A
Sbjct: 183 RVNDQYRRMMEQERRIDEDPADPTRYAELASIQLDMHRYDEALSLANQMIALDPQGRAGY 242
Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQGY--WAR 264
+ L Y + ++A E+ I +YP+ W +
Sbjct: 243 D---MLAAVYEQMGDAEQAAEIYQRIANQYPEDPDAWEK 278
>gi|255524706|ref|ZP_05391658.1| membrane-associated protein [Clostridium carboxidivorans P7]
gi|296185667|ref|ZP_06854076.1| lipoprotein, putative [Clostridium carboxidivorans P7]
gi|255511600|gb|EET87888.1| membrane-associated protein [Clostridium carboxidivorans P7]
gi|296049795|gb|EFG89220.1| lipoprotein, putative [Clostridium carboxidivorans P7]
Length = 188
Score = 37.9 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 10/58 (17%), Positives = 20/58 (34%), Gaps = 1/58 (1%)
Query: 19 LYK-FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
+ K F+L + + L S ++ ++ + A LK +F K
Sbjct: 1 MKKIFSLLVLVFVFTISLSACGNLSDEGNKTTRLSSKTSPKQTIQIAFEALKNGDFKK 58
>gi|239815675|ref|YP_002944585.1| tol-pal system protein YbgF [Variovorax paradoxus S110]
gi|239802252|gb|ACS19319.1| tol-pal system protein YbgF [Variovorax paradoxus S110]
Length = 249
Score = 37.9 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 38/117 (32%), Gaps = 14/117 (11%)
Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213
+ V+RY S Y A+ +G Y AI F
Sbjct: 143 QFAQAQTAFAEFVKRYPQSGY--------------NASALFWLGNAQYATRNYNEAIANF 188
Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
+ +L+ D A EA+ + + L AR + + + YPQ A+ +
Sbjct: 189 RSMLSLAPDHAKAPEAVLSIANCQIELKDTRAARRTLEDLTKAYPQSEAAQAGRERL 245
>gi|254442097|ref|ZP_05055573.1| tetratricopeptide repeat domain protein [Verrucomicrobiae bacterium
DG1235]
gi|198256405|gb|EDY80713.1| tetratricopeptide repeat domain protein [Verrucomicrobiae bacterium
DG1235]
Length = 506
Score = 37.9 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 10/60 (16%), Positives = 22/60 (36%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
T + +Y+ AV + N+ +A F + + A L + ++Q +
Sbjct: 348 ETTGDELELSLYDSAVAAYEAGNYDEAIPLFWELLGENSNDAQAWFRLSQAYYMQNNWYD 407
>gi|42527581|ref|NP_972679.1| TPR domain-containing protein [Treponema denticola ATCC 35405]
gi|41818166|gb|AAS12590.1| TPR domain protein [Treponema denticola ATCC 35405]
Length = 242
Score = 37.9 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 11/58 (18%), Positives = 24/58 (41%)
Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
+ + + A+ Y AL+ ++A + + E+YPQ WA ++ +
Sbjct: 176 YYERASKVENFPLIPRALFNTGRLYEALSKKEDAILSYNRLLEKYPQNEWALLAKSRI 233
>gi|229099444|ref|ZP_04230373.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
cereus Rock3-29]
gi|229118457|ref|ZP_04247811.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
cereus Rock1-3]
gi|228665027|gb|EEL20515.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
cereus Rock1-3]
gi|228683940|gb|EEL37889.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
cereus Rock3-29]
Length = 270
Score = 37.9 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 12/70 (17%), Positives = 22/70 (31%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K LT S ++ L + + L E+ EKA L+++ +
Sbjct: 1 MKKLLLTALISTSIFGLAACGGKDKDEKKLVVGASNVPHAEILEKAKPLLEKKGIELEVK 60
Query: 79 YFNQCSRDFP 88
F
Sbjct: 61 KFQDYVLPNK 70
>gi|218900140|ref|YP_002448551.1| putative ABC transporter, substrate-binding protein [Bacillus
cereus G9842]
gi|218543123|gb|ACK95517.1| putative ABC transporter, substrate-binding protein [Bacillus
cereus G9842]
Length = 270
Score = 37.9 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 12/70 (17%), Positives = 22/70 (31%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K LT S ++ L + + L E+ EKA L+++ +
Sbjct: 1 MKKLLLTALISTSIFGLAACGGKDKDEKKLVVGASNVPHAEILEKAKPLLEKKGIELEVK 60
Query: 79 YFNQCSRDFP 88
F
Sbjct: 61 KFQDYVLPNK 70
>gi|300869841|ref|YP_003784712.1| putative TPR-repeat-containing protein [Brachyspira pilosicoli
95/1000]
gi|300687540|gb|ADK30211.1| putative TPR-repeat-containing protein [Brachyspira pilosicoli
95/1000]
Length = 406
Score = 37.9 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 26/222 (11%), Positives = 62/222 (27%), Gaps = 25/222 (11%)
Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
D +++ A +++ A +N +P + A + + G
Sbjct: 194 EDNSEVALLFKSAEELKNMKDYDNAISSYNNVISQYPDSKYA-------VYSYFRVGDIY 246
Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
Y ++ + + + V + + ++Y + ++ +Y N
Sbjct: 247 NLKKDYTNAFDTYKKASELKTANNNQKAAALYSMGVVRKVENNNQEAMKYFNDVIAKYPN 306
Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231
+ EI + G+ + + LA+ +AM
Sbjct: 307 T--------------YSYGNAVYEIADSLKQMGKISDGLNMLEKSLASKEKFSKRADAML 352
Query: 232 RLVEAYV----ALALMDEAREVVSLIQERYPQGYWARYVETL 269
L E Y + ++A + YP +Y
Sbjct: 353 LLAEIYETGNNNVRDFNKAYLTYNQYLSEYPNTSKTKYANDR 394
>gi|261749495|ref|YP_003257181.1| hypothetical protein BPLAN_424 [Blattabacterium sp. (Periplaneta
americana) str. BPLAN]
gi|261497588|gb|ACX84038.1| conserved hypothetical protein [Blattabacterium sp. (Periplaneta
americana) str. BPLAN]
Length = 227
Score = 37.9 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 24/188 (12%), Positives = 64/188 (34%), Gaps = 4/188 (2%)
Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
+ ++ F S + ++ ++ ++ + + +
Sbjct: 23 LKNYDSHISPPFFHRNLSNSHFSKNEISILKNVFKNWNFFSKKDLSNSNGPNSEENRLFK 82
Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196
G + + DQ T+ + +++ + +Y NS ++ R + ++ ++ I
Sbjct: 83 RGFNEFIHSLNFDLDQTKTRAAINTLNQFITKYPNSQKIQEIRNIIVKLIKKIEKRDYYI 142
Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR----EVVSL 252
Y +Y AA F+ + Y + + E+A+ ++ +A E E
Sbjct: 143 ANTYFIMRKYKAASIYFKDFIKKYPKSIYKEKALYKICIITYKMADNKEKALDFFEAYQR 202
Query: 253 IQERYPQG 260
+ YP
Sbjct: 203 YVKLYPDS 210
>gi|268317298|ref|YP_003291017.1| TPR repeat-containing protein [Rhodothermus marinus DSM 4252]
gi|262334832|gb|ACY48629.1| TPR repeat-containing protein [Rhodothermus marinus DSM 4252]
Length = 402
Score = 37.9 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 20/236 (8%), Positives = 51/236 (21%), Gaps = 6/236 (2%)
Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
+ S + + + +D R + +A L+ +F++A +
Sbjct: 7 IFYVLLSGVMLMGGACSSRQTERRLVDPR-----VRALLLQAEQALQRYDFAQALALADS 61
Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
+R + + A + + + +
Sbjct: 62 AARYDSDEPAIYFLQGRLYAEMAQFDRAEAAYQEVLQRDPNFRGIWHNLANLKARQHRFR 121
Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
+ I + + + Y V A + +
Sbjct: 122 EAIALYQKELQRYPGA-PTWQAMARAYRELGVVDSAAYAYRQALQLDSTYVPAYIGMTQL 180
Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
+ + E L E + EA + + E +P
Sbjct: 181 LDDEGRFAEALTYAQRAQALDPDNPETNYLLGELLMKNGRFAEALPYLQRVVEAWP 236
>gi|229367138|gb|ACQ58549.1| Mitochondrial fission 1 protein [Anoplopoma fimbria]
Length = 154
Score = 37.9 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 13/83 (15%), Positives = 29/83 (34%)
Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
+ E K E + L + + + + + L A L ++A
Sbjct: 32 RETKFEYAWCLIRSKYTEDIKKGIVLLEELVQKTSNDDSRDFLFYLAVANYRLKEYEKAL 91
Query: 248 EVVSLIQERYPQGYWARYVETLV 270
+ + +Q+ P A+ +E L+
Sbjct: 92 KYIRTLQKNEPGNKQAQELEKLI 114
>gi|227538836|ref|ZP_03968885.1| two component sensor histidine kinase [Sphingobacterium
spiritivorum ATCC 33300]
gi|227241345|gb|EEI91360.1| two component sensor histidine kinase [Sphingobacterium
spiritivorum ATCC 33300]
Length = 637
Score = 37.9 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 23/254 (9%), Positives = 71/254 (27%), Gaps = 15/254 (5%)
Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEK--AVLFLKEQNFSK 75
+ + A IF +++ F+ ++ + + Q++ A+ L + K
Sbjct: 1 MIARKAYFIFLILSLLFVFSCRQKEESRQDEKVIANAIPQKDYLSLIIAMDTLSSLEYKK 60
Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN------ 129
+ A + A E+ + +
Sbjct: 61 VVKREYDLLNHSADTANNPFYHYFKARMYMQDKLRDSALMEYEKMTGKSTDDDIELLKKV 120
Query: 130 ---VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
+ V +S + M + + + + + +++ R + + +
Sbjct: 121 NILDYTINNGVTVSASVMKKILNVLEASERQHSRFIYRFYDLLAKAYFQNDNEKESLGYA 180
Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA----L 242
+ K +++ Y + + + ++A + +LA
Sbjct: 181 ERYYEKHPYKSHPVIEQRYYDISFLLASGLGDYEKMKLYNDKARKLAKSIHDSLAIARTY 240
Query: 243 MDEAREVVSLIQER 256
+EA+ V ++
Sbjct: 241 DNEAQVYVRQMKYD 254
>gi|302340547|ref|YP_003805753.1| hypothetical protein Spirs_4077 [Spirochaeta smaragdinae DSM 11293]
gi|301637732|gb|ADK83159.1| Tetratricopeptide TPR_2 repeat protein [Spirochaeta smaragdinae DSM
11293]
Length = 820
Score = 37.9 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 20/201 (9%), Positives = 45/201 (22%), Gaps = 8/201 (3%)
Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
+ +K F++A F + P A +L ++ E Q
Sbjct: 44 GTIAMKRGRFAEAAGTFERILSFAPDNVEALNNLGVALRSTGDMDSALTYLKRAYETDPQ 103
Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
+ + Y + IR S +
Sbjct: 104 RADVQYNIANCLKSKRIYDEAIRYYRNAISLN----PSFSFAYNNLGTIYESQDQTDRAI 159
Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA----EHAEEAMARLVEAYVA 239
+ + G + + ++ + Y + + L A
Sbjct: 160 TTYEEGLQYDTNHPTLRYNLGISLESQGDYEAAIREYKRSLKSRPGWPSGINNLGVALQK 219
Query: 240 LALMDEAREVVSLIQERYPQG 260
++EA + + P
Sbjct: 220 AGKLEEAERMFRDLVRIAPGS 240
>gi|284052940|ref|ZP_06383150.1| TPR repeat-containing serine/threonin protein kinase [Arthrospira
platensis str. Paraca]
gi|291569118|dbj|BAI91390.1| serine/threonine protein kinase containing TPR domain [Arthrospira
platensis NIES-39]
Length = 706
Score = 37.9 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 32/235 (13%), Positives = 62/235 (26%), Gaps = 27/235 (11%)
Query: 32 VCFLVGW-ERQSSRDVYLDSVTDVRYQREVY---EKAVLFLKEQNFSKAYEYFNQCSRDF 87
+ LV +Q + + ++ + KE N+ KA + Q
Sbjct: 403 ILGLVSCRSQQWKQAIQQLQHGIKLSPKQAWMHTNLGWALGKEGNWQKADQTIQQALNLD 462
Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147
P + A +F QA + G Q P S + +L ++ A + R
Sbjct: 463 PNSSFALGVKAWISFHLRQWKIVVQAGTQGIFKSQQQPSSVAIALKSWLYPLTIAALERV 522
Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
LQ ++ V + ++ +
Sbjct: 523 TSNKSGDITRRLQAFTQQVPNNA----------LALGFKAWYEYRKSDHVSCRQSLKLAS 572
Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
V+ N Y L +A + + I ++ P+ W
Sbjct: 573 QCQEIPDWVMKNG-------------GLIYEHLGDFQKAADWYNKIYQKQPKDAW 614
>gi|238504042|ref|XP_002383253.1| DnaJ and TPR domain protein [Aspergillus flavus NRRL3357]
gi|220690724|gb|EED47073.1| DnaJ and TPR domain protein [Aspergillus flavus NRRL3357]
Length = 727
Score = 37.9 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 23/194 (11%), Positives = 50/194 (25%), Gaps = 17/194 (8%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFP-FAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
E+ K +++ KA + ++Q P + K L A + +Y A E
Sbjct: 455 EEGNNAFKAKDYRKAIDLWSQALEVDPSNKDMNAKILQNRAQAHINLKEYDNAVKDCTEA 514
Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
+ P ++ + ++ + E ++
Sbjct: 515 LRLDPSYVKA-----------QKIRAKAHGAAGNWEEAVRDYKAVAESNPTEKGIQEEIR 563
Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY-----SDAEHAEEAMARLVE 235
+ K+ K ++ + Y D +E + E
Sbjct: 564 KAEFELKKAQRKDYYKILGVSKDASEHEIKKAYRKLAIQYHPDKNRDDPQGDEKFKEIGE 623
Query: 236 AYVALALMDEAREV 249
AY L +
Sbjct: 624 AYETLIDPQKRASY 637
>gi|114650346|ref|XP_001138934.1| PREDICTED: dnaJ homolog subfamily C member 3 isoform 4 [Pan
troglodytes]
Length = 504
Score = 37.9 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 22/258 (8%), Positives = 66/258 (25%), Gaps = 20/258 (7%)
Query: 34 FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93
L ++ + + + +A+ +++ A + ++ +
Sbjct: 131 VLKSNPSENEEKEAQSQLIKSDEMQRLRSQALNAFGSGDYTAAIAFLDKILEVCVWDAEL 190
Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153
R+ + K + E+ Y + + +V +
Sbjct: 191 RELRAECFIKEGEPRKAISDLKAASKLKNDNTEAFYKISTLYYQLGDHELSLSEVRECLK 250
Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK----------- 202
+ + + + + ++ A + GR A + E
Sbjct: 251 LDQDHKRCFAHYKQVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPSIAEYTIRSKE 310
Query: 203 -----RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA-REVVSLIQER 256
+ + ++ A+ EAY+ + DEA ++ + +
Sbjct: 311 RICHCFSKDEKPVEAIRVCSEVLQMEPDNVNALKDRAEAYLIEEMYDEAIQDYETAQEHN 370
Query: 257 YPQGYWA---RYVETLVK 271
+ L+K
Sbjct: 371 ENDQQIREGLEKAQRLLK 388
>gi|229193266|ref|ZP_04320217.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
cereus ATCC 10876]
gi|228590243|gb|EEK48111.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
cereus ATCC 10876]
Length = 270
Score = 37.9 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 12/70 (17%), Positives = 22/70 (31%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K LT S ++ L + + L E+ EKA L+++ +
Sbjct: 1 MKKLLLTALISTSIFGLAACGGKDKDEKKLVVGASNVPHAEILEKAKPLLEKKGIELEVK 60
Query: 79 YFNQCSRDFP 88
F
Sbjct: 61 KFQDYVLPNK 70
>gi|241764617|ref|ZP_04762632.1| tol-pal system protein YbgF [Acidovorax delafieldii 2AN]
gi|241365938|gb|EER60568.1| tol-pal system protein YbgF [Acidovorax delafieldii 2AN]
Length = 256
Score = 37.9 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 25/120 (20%), Positives = 42/120 (35%), Gaps = 2/120 (1%)
Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
++R + L N+ + R Y G A +G EY AI
Sbjct: 135 EKRDFEAALAIFRSGKFAEANAAFAGFVRQYPRSGYVPSA--RFWLGNAQYAAREYKEAI 192
Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
F+L+L+ + A EA + + L AR+ + + YPQ A + +
Sbjct: 193 GNFKLLLSEAPNHARAPEAALSIANCQIELKETRTARKTLEDLLRAYPQSEAAVAAKERL 252
>gi|226944845|ref|YP_002799918.1| glycosyl transferase [Azotobacter vinelandii DJ]
gi|226719772|gb|ACO78943.1| glycosyl transferase,TPR repeat protein [Azotobacter vinelandii DJ]
Length = 1221
Score = 37.9 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 23/197 (11%), Positives = 55/197 (27%), Gaps = 6/197 (3%)
Query: 65 VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY-ITQ 123
+ ++++N+ +A E + +P + +A K ++ + + +
Sbjct: 1 MQLVQKRNYPEAAELAAVLTERYPDSPLAWKVWGLALLESRRPQQAIEVLHRADGIDPED 60
Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
N+ Y G + + R Y
Sbjct: 61 PDTLHNLGIAYLKQGNIQKADHYLGQALEVLPSFAKARLVLAKMRIDTGQYQAALEQIAI 120
Query: 184 VGRNQLAAKEVEIGRYY--LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
+ + + K + + + + Y D ++ L ++Y L
Sbjct: 121 AEEKGANENQCLSLKAFALNKLHRHTETLQVQEEIRRRYPDDLLN---LSNLADSYRMLT 177
Query: 242 LMDEAREVVSLIQERYP 258
DEA + + ER P
Sbjct: 178 RFDEAEKTFLQLLERDP 194
>gi|221122498|ref|XP_002158546.1| PREDICTED: similar to nephrocystin 3 [Hydra magnipapillata]
Length = 1144
Score = 37.9 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 15/214 (7%), Positives = 39/214 (18%), Gaps = 2/214 (0%)
Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99
+ + + + F +A +Y+ + + +
Sbjct: 493 SLEVNKHIHEDQPHPDVASILNNLGTAYRNKGKFDQAIKYYKESLEMNKLIHKDQPHSNL 552
Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
+ + Y + ++ S + K
Sbjct: 553 AGSLNSLGNAYCNKGKYDRAIKYYEESLEMNKLIHKDQPHSDIASSLNNLGTAYKNKGEY 612
Query: 160 QYMSRIVERYTNSPY--VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
+ E K Y + +Y ++
Sbjct: 613 DQAIKYYEESLEIKKLIHKDQLHPDVASSLNNLGNAYSDKGEYERAIKYHQESLEMNKLI 672
Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
++ L AY D A +
Sbjct: 673 HKDQPHPDVARSLNNLGNAYGNKGEYDRAIKYYE 706
>gi|78356417|ref|YP_387866.1| N-acetylmuramoyl-L-alanine amidase [Desulfovibrio desulfuricans
subsp. desulfuricans str. G20]
gi|78218822|gb|ABB38171.1| N-acetylmuramoyl-L-alanine amidase [Desulfovibrio desulfuricans
subsp. desulfuricans str. G20]
Length = 604
Score = 37.9 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 21/137 (15%), Positives = 41/137 (29%), Gaps = 8/137 (5%)
Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
+ + Q + +R P + +Y R+ E
Sbjct: 42 WRQFHSLTKDARKGKYRDNWLRIEQDFMDVYKRSPRGPLAPKSLYYAGRVRS-------E 94
Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY-VALALMDEAREVVSLIQ 254
+G +Y A+ FQ + + ++A+ R Y L AR +++ I
Sbjct: 95 LGARSYLASDYRRAVEYFQRLANRFPSHSWTDDALYRAAAIYKDRLGDHGTARSLLNTIL 154
Query: 255 ERYPQGYWARYVETLVK 271
+ QG L +
Sbjct: 155 RDHQQGDMYYKAIALHR 171
>gi|67920262|ref|ZP_00513782.1| TPR repeat:Sel1-like repeat:Sel1-like repeat [Crocosphaera watsonii
WH 8501]
gi|67857746|gb|EAM52985.1| TPR repeat:Sel1-like repeat:Sel1-like repeat [Crocosphaera watsonii
WH 8501]
Length = 353
Score = 37.9 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 21/217 (9%), Positives = 50/217 (23%), Gaps = 9/217 (4%)
Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
+ +++++ E + +A + Q +A + ++ Q + A
Sbjct: 24 QSIEQLFQQGNQAQNEGRYREAESIWRQIISIDSNNAIAYFYIGLALRKQGKLEEATAAY 83
Query: 115 SLGEEY---ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
E + + + M ++
Sbjct: 84 KKAIELDPNYSFAYNNMGNALRKQGKLEEAIAAYKKAIELDPNDAFAYNNMGLALDDQGK 143
Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231
A A +G ++G+ AI ++ + + A
Sbjct: 144 LEEAIAAYKKAIELDPNYATAYYNMGNALNRQGKLEEAIAAYKKAIELDPNYSF---AYN 200
Query: 232 RLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
+ A DEA E P +
Sbjct: 201 NMGVALRKQGKYDEAIAAYKKAIEINPN---YAFAYN 234
>gi|324328915|gb|ADY24175.1| putative ABC transporter, substrate-binding protein [Bacillus
thuringiensis serovar finitimus YBT-020]
Length = 270
Score = 37.9 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 21/202 (10%), Positives = 46/202 (22%), Gaps = 3/202 (1%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K LT S ++ L + + L E+ EKA L+++ +
Sbjct: 1 MKKLLLTALISTSIFGLAACGGKDKDEKKLVVGASNVPHAEILEKAKPLLEKKGIELEVK 60
Query: 79 YFNQCSRDFP---FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
F + +++ + + + + + Y
Sbjct: 61 KFQDYVLPNKSLADKDLDANYFQHIPYLEKEMKDKKYDFEVAGKIHLEPIGVYSQKYKSL 120
Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
A +I L + I++ VK + L K
Sbjct: 121 KELPDGATIIMSNSVADHGRGLAILQKEGILKIKDGVDPVKATPKDIADNPKNLKFKTDI 180
Query: 196 IGRYYLKRGEYVAAIPRFQLVL 217
+
Sbjct: 181 EPGLLPQVYNNKEGDAVLINSN 202
>gi|311103959|ref|YP_003976812.1| tol-pal system protein YbgF [Achromobacter xylosoxidans A8]
gi|310758648|gb|ADP14097.1| tol-pal system protein YbgF [Achromobacter xylosoxidans A8]
Length = 229
Score = 37.9 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 11/79 (13%), Positives = 30/79 (37%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ +G ++ AI + ++ D A +A+ + + + + A+ +
Sbjct: 148 QFYLGSSRYALKDFKGAIEQLNAMVQKAPDNARAPDALLVIAGSQIEMNNRAGAKTTLQR 207
Query: 253 IQERYPQGYWARYVETLVK 271
I YP A ++ ++
Sbjct: 208 IVRDYPTTPAASTAKSRLQ 226
>gi|317127575|ref|YP_004093857.1| cell surface glycoprotein [Bacillus cellulosilyticus DSM 2522]
gi|315472523|gb|ADU29126.1| cell surface glycoprotein [Bacillus cellulosilyticus DSM 2522]
Length = 398
Score = 37.9 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 7/41 (17%), Positives = 15/41 (36%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQRE 59
+ K ++F I + LV + + ++ Q E
Sbjct: 1 MRKILFSLFLFITIFSLVACGSEDTSQEEVEDENVSTDQEE 41
>gi|229082234|ref|ZP_04214697.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
cereus Rock4-2]
gi|228700666|gb|EEL53189.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
cereus Rock4-2]
Length = 270
Score = 37.9 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 19/202 (9%), Positives = 45/202 (22%), Gaps = 3/202 (1%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + LT S ++ L + + L E+ EKA L+++ +
Sbjct: 1 MKRLLLTALISTSIFGLAACGGKDKDEKKLVVGASNVPHAEILEKAKPLLEKKGIELEVK 60
Query: 79 YFNQCSRDFP---FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
F + +++ + + + + + Y
Sbjct: 61 KFQDYVLPNKSLADKELDANYFQHIPYLEKEIKDKKYDFEIAGKIHIEPIGVYSQKYKSL 120
Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
A +I L + I++ V + L K
Sbjct: 121 KELPDGATIIMSNSVTDHGRGLAILQKEGILKIKDGVDPVSATPKDIADNPKHLKFKTDI 180
Query: 196 IGRYYLKRGEYVAAIPRFQLVL 217
+
Sbjct: 181 EPGLLPQVYNNKEGDAVLINSN 202
>gi|225873213|ref|YP_002754672.1| TPR domain protein [Acidobacterium capsulatum ATCC 51196]
gi|225792497|gb|ACO32587.1| TPR domain protein [Acidobacterium capsulatum ATCC 51196]
Length = 348
Score = 37.9 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 20/191 (10%), Positives = 52/191 (27%), Gaps = 7/191 (3%)
Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK----SLLMSAFVQYSAGKYQQAASLGEE 119
+ F + +A E F + P + + +L + + ++A
Sbjct: 75 GLAFYRTGRLPQAKEAFEKAIAQNPKDIESVQLEGLTLFRMGQPKAAIPYLEKAKQWMPT 134
Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
+ Y+ + + +++++ +
Sbjct: 135 ANADASHVLGLCYMNAQQFDDARRAFAAEYDLPPDSAAAHLILAQMLMLSNLTDQGAAEA 194
Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
+ L IG L + + A+ + Q +RL +AY
Sbjct: 195 QKALALQPGLPMAHFLIGEVDLFKSQVDEAVQQLQAEQKINPTYPPV---YSRLGDAYFR 251
Query: 240 LALMDEAREVV 250
+ D+A + +
Sbjct: 252 IGKYDQAEQAL 262
>gi|91203857|emb|CAJ71510.1| similar to O-linked GlcNAc transferase [Candidatus Kuenenia
stuttgartiensis]
Length = 430
Score = 37.9 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 25/243 (10%), Positives = 56/243 (23%), Gaps = 6/243 (2%)
Query: 23 ALTIFFSIAVCFLVGWE-RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
+ F V F G + V + + + + +A F
Sbjct: 2 KKILIFMCLVVFCAGCSFSHTGETVNQSKARKYQLAMDYNNLGTKYFDKDMIHEAIIQFK 61
Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
+ P + +L SK D + +
Sbjct: 62 RAIALNPDLAESHNNLG--VSYCNIQEYDSAIEEFKLAIKLNPDYSKAHDNLGFAYTKKG 119
Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
+ + ++ + + IG
Sbjct: 120 LFEEAIAEHQRALKINPQDMEAKKNLEIAKREASLEVTKKKFQIETKGISPGYIIGYNQY 179
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
G + A+ F+ +L Y + + L Y ++++A + + + P
Sbjct: 180 ASGLFDDALSSFKNILVGYPNDLM---SCYYLGCTYTMKGMVNDAINLYKNLLAKDPSNI 236
Query: 262 WAR 264
AR
Sbjct: 237 IAR 239
>gi|89890028|ref|ZP_01201539.1| conserved hypothetical protein [Flavobacteria bacterium BBFL7]
gi|89518301|gb|EAS20957.1| conserved hypothetical protein [Flavobacteria bacterium BBFL7]
Length = 596
Score = 37.9 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 30/204 (14%), Positives = 68/204 (33%), Gaps = 3/204 (1%)
Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
A + + ++ F++A ++Q D P +A+++ A Y G + + + + +
Sbjct: 379 ADILVLQEQFNRALILYSQVQTDLPNDELAQEAQYRVARTSYYQGDFPWSLTQLKVLRSA 438
Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
+ D + + +S + +A + S Y
Sbjct: 439 TSKLIANDAMELSLTISDHSLEDTTFVALKAFAKADLKQYQNQRSEAISLY--DQLLQNH 496
Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY-VALAL 242
G + + Y G AA +Q ++ N++D A++A +L Y
Sbjct: 497 KGDPIEDEALLNQAKLYEIEGNLEAAKNNYQTIIDNFADGILADDAFYKLALLYEEKFND 556
Query: 243 MDEAREVVSLIQERYPQGYWARYV 266
+ +A+ + I Y
Sbjct: 557 LSKAQALYERIIYDYADSIHFVDA 580
>gi|73667569|ref|YP_303584.1| hypothetical protein Mbar_A0011 [Methanosarcina barkeri str.
Fusaro]
gi|72394731|gb|AAZ69004.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro]
Length = 1138
Score = 37.9 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 15/216 (6%), Positives = 55/216 (25%), Gaps = 10/216 (4%)
Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
Y K L+ N+ +A ++++ + +++ + +
Sbjct: 137 SPENWYNKGNKHLELNNYVEAINFYDKSFAANTYLSTVWYRKALASEQLGLDQESLNSYD 196
Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
+ + + + + + + + + ++ +
Sbjct: 197 KS----IELNSNSSSSLQMQGMAYLGLEKYPEAIEYLDSALNITPDNAELLYQKGVVLDK 252
Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS----DAEHAEEAMA 231
G ++ + ++ + +G + + + L Y + +
Sbjct: 253 SGDYETAIDCYDKAISFNPDLVNAWHNKGVNLEKMGIYDEALTCYEFVLLSEPENLDVLQ 312
Query: 232 RLVEAYVALALMDEARE-VVSLIQERYPQGY-WARY 265
R L DEA + ++ W
Sbjct: 313 RKGVCLEKLGRNDEALQCYDEVLVYDPGSSEAWYSK 348
Score = 35.5 bits (79), Expect = 7.2, Method: Composition-based stats.
Identities = 18/219 (8%), Positives = 47/219 (21%), Gaps = 6/219 (2%)
Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
D Y + Y K + K +++ A E +++ + +
Sbjct: 474 DSGYAKVWYRKGLDSSKIKDYKDAVESYDKALEIDENYTLTWAGKAFALAKLGEYESSLT 533
Query: 113 AASLG----EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
+ + V + + + D + + + +
Sbjct: 534 CYNKVLGAVPSSAVAWYNKGLVLDELGKHAEASECYNQTLLIDPEYSAARFKLNKNMKQD 593
Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
T + + + L +S +
Sbjct: 594 STEALISEHVKNNSADANPAQMLSGGFWAYLLNYEYASSEDRDEPSEDLNLFSPDISYDA 653
Query: 229 AMARLVEAYVALALMDEA-REVVSLIQERYPQGY-WARY 265
A Y L + D+A ++ + W
Sbjct: 654 AWYGKASIYGKLGMYDDALNSYDMVLAINPARAEAWYEK 692
>gi|47567022|ref|ZP_00237739.1| pheromone cOB1 precursor/lipoprotein, YaeC family [Bacillus
cereus G9241]
gi|47556340|gb|EAL14674.1| pheromone cOB1 precursor/lipoprotein, YaeC family [Bacillus
cereus G9241]
Length = 270
Score = 37.9 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 12/70 (17%), Positives = 22/70 (31%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K LT S ++ L + + L E+ EKA L+++ +
Sbjct: 1 MKKLLLTALISTSIFGLAACGGKDKDEKKLVVGASNVPHAEILEKAKPLLEKKGIELEVK 60
Query: 79 YFNQCSRDFP 88
F
Sbjct: 61 KFQDYVLPNK 70
>gi|332883325|gb|EGK03608.1| hypothetical protein HMPREF9456_01675 [Dysgonomonas mossii DSM
22836]
Length = 1200
Score = 37.9 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 21/188 (11%), Positives = 54/188 (28%), Gaps = 8/188 (4%)
Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
A YF ++ + +++ + +E T +
Sbjct: 500 ATFYFYNEQAVNQGKIAFQQQWGNRKLEDDWRRRNKRSTGIFDEVDTAQQSDSLDTEAHR 559
Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
+ + + P + + ++Y + + + + + L K+
Sbjct: 560 IKELQAQNEELNSPKNAVDDEYSVEYYLQQLPLTPEAIKESNVLIEDALYKMGLIYKD-- 617
Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
K + AI F + + + + EE +L Y+ L + S +
Sbjct: 618 ------KLQDMDLAIDAFNTNIHRFPNTPNLEEIYYQLFLIYMRLGDNNMMATYRSKLMN 671
Query: 256 RYPQGYWA 263
+ G +A
Sbjct: 672 EFASGKYA 679
>gi|307154460|ref|YP_003889844.1| Lytic transglycosylase catalytic [Cyanothece sp. PCC 7822]
gi|306984688|gb|ADN16569.1| Lytic transglycosylase catalytic [Cyanothece sp. PCC 7822]
Length = 724
Score = 37.9 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 31/241 (12%), Positives = 69/241 (28%), Gaps = 2/241 (0%)
Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
+ + + RD + ++ + + ++ KA + + + S
Sbjct: 202 KLMLLLVKYNAFDPSMNAVRDRLVKDYAPELTPQDWEVIGNGYWEFGDYRKATQAYYKAS 261
Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
R + L +S + YQQ + + +
Sbjct: 262 RTPVNLYRYARGLHLSGQKAQAKQAYQQLVRSFPDAPETGEALMRLVGLSGSSEALGYLD 321
Query: 145 IRDVPYDQRATKL--MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
+ +A + ++ + + A +I + Y
Sbjct: 322 YAINKFPLQAPDALLKRAELLDLLNSKQAASKARQQLLVQYPNSEAAAGYRWKIAKSYAD 381
Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
+G+ V A Q + N D A +A + + L +A++ RYPQ Y+
Sbjct: 382 KGDLVKAWEWAQPITINAPDTTVAAKAGFWVGKWAQKLNRPQDAKDAFLHTLARYPQSYY 441
Query: 263 A 263
A
Sbjct: 442 A 442
Score = 37.5 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 20/225 (8%), Positives = 49/225 (21%), Gaps = 11/225 (4%)
Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
+ + +D +Y + + +A F R + K +
Sbjct: 146 KKLIQTYPSDPVVAEALYYLGK--YDPKYWDQAISQFPNHPRTWEIINKRLKDNPKQPKL 203
Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD--VPYDQRATKLMLQY 161
KY + + + + +A +
Sbjct: 204 MLLLVKYNAFDPSMNAVRDRLVKDYAPELTPQDWEVIGNGYWEFGDYRKATQAYYKASRT 263
Query: 162 MSRIVE-----RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
+ + + V A + E + A+
Sbjct: 264 PVNLYRYARGLHLSGQKAQAKQAYQQLVRSFPDAPETGEALMRLVGLSGSSEALGYLDYA 323
Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
+ + A +A+ + E L A + + +YP
Sbjct: 324 INKFP--LQAPDALLKRAELLDLLNSKQAASKARQQLLVQYPNSE 366
>gi|295094812|emb|CBK83903.1| Tetratricopeptide repeat. [Coprococcus sp. ART55/1]
Length = 272
Score = 37.9 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 33/259 (12%), Positives = 72/259 (27%), Gaps = 13/259 (5%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
K + F++ + V S + S D E+Y++ V + K ++ +A +
Sbjct: 13 RKINYKLIFALVILACVAVLLISYAISAIVSQKD-----ELYDQGVKYYKSGSYQEAIDS 67
Query: 80 FNQ--CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
F+ + L A + +Y +AA+ E I NV + L
Sbjct: 68 FDNALAENQLFSKKKDQNIKLYLADAYLKSAQYTEAANTYNELIQDSFTGSNVKDLKELA 127
Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA------ 191
+ + + V + +
Sbjct: 128 TALSDFSQGNYGGALDVLLKQAETYPELYMYIGTCYAVTDESDKMFESYEKYVQTFGFNS 187
Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
+ Y + + + + D + +E + + Y D+A E+
Sbjct: 188 YVYAMYGSYYLNNGDMESAIAYITNGLDSGDKIYRKELLMLEITYYEKNEDYDKAYEIAG 247
Query: 252 LIQERYPQGYWARYVETLV 270
+ YP + T +
Sbjct: 248 QLVSEYPDYEKGQKEYTFL 266
>gi|260832273|ref|XP_002611082.1| hypothetical protein BRAFLDRAFT_70431 [Branchiostoma floridae]
gi|229296452|gb|EEN67092.1| hypothetical protein BRAFLDRAFT_70431 [Branchiostoma floridae]
Length = 1474
Score = 37.9 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 21/203 (10%), Positives = 47/203 (23%), Gaps = 8/203 (3%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
++ KA Y Q + + ++ VA S + + F +Q
Sbjct: 1154 NMGTALQHMGDYRKAINYLEQALQMYKGIYSRVAAHSDIATLFNNLGESWHQLGDHRKAI 1213
Query: 120 YITQYPESKNVDYVYYLVGMSYAQM---IRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
+ D + + + + + + +
Sbjct: 1214 SYHEQALQMTKDIHGESTPHPQIALSLSNLGYAWSDLGDQRAAIDFNNEALQMFKCIFGQ 1273
Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA--MARLV 234
Y K Y ++ + + H + A + L
Sbjct: 1274 STAHPYIANSLNNLGMAWYEVGDYRKAISYHEKALEMRISIHG-QGSAHYDIATSLNNLG 1332
Query: 235 EAYVALALMDEAREVVSLIQERY 257
+AY L +A + Y
Sbjct: 1333 QAYSNLGDQKKAISYLKQALHMY 1355
>gi|169764699|ref|XP_001816821.1| DnaJ and TPR domain protein [Aspergillus oryzae RIB40]
gi|83764675|dbj|BAE54819.1| unnamed protein product [Aspergillus oryzae]
Length = 727
Score = 37.9 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 23/194 (11%), Positives = 50/194 (25%), Gaps = 17/194 (8%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFP-FAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
E+ K +++ KA + ++Q P + K L A + +Y A E
Sbjct: 455 EEGNNAFKAKDYRKAIDLWSQALEVDPSNKDMNAKILQNRAQAHINLKEYDNAVKDCTEA 514
Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
+ P ++ + ++ + E ++
Sbjct: 515 LRLDPSYVKA-----------QKIRAKAHGAAGNWEEAVRDYKAVAESNPTEKGIQEEIR 563
Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY-----SDAEHAEEAMARLVE 235
+ K+ K ++ + Y D +E + E
Sbjct: 564 KAEFELKKAQRKDYYKILGVSKDASEHEIKKAYRKLAIQYHPDKNRDDPQGDEKFKEIGE 623
Query: 236 AYVALALMDEAREV 249
AY L +
Sbjct: 624 AYETLIDPQKRASY 637
>gi|332838298|ref|XP_508927.3| PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP4 [Pan
troglodytes]
Length = 459
Score = 37.5 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 25/233 (10%), Positives = 69/233 (29%), Gaps = 14/233 (6%)
Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQN---------FSKAYEYFNQCSRDFPFAG 91
+ + ++ + Y+ +++++ L + +A + + +
Sbjct: 163 KPNEGAIVEVALEGYYKDQLFDQRELRFEIGEGENLDLPYGLERAIQRMEKGEHSIVYLK 222
Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151
+ + + L + + ES ++ L + + V +
Sbjct: 223 PSYAFGSVGKEKFQIPPNAELKYELHLKSFEKAKESWEMNSEEKLEQSTIVKERGTVYFK 282
Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
+ K L +IV + F + A + + + A
Sbjct: 283 EGKYKQALLQYKKIVSWLEY-----ESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSA 337
Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
+ + E+ + R EA++A+ + AR + + YP A+
Sbjct: 338 AIESCNKALELDSNNEKGLFRRGEAHLAVNDFELARADFQKVLQLYPNNKAAK 390
>gi|163938754|ref|YP_001643638.1| hypothetical protein BcerKBAB4_0749 [Bacillus weihenstephanensis
KBAB4]
gi|163860951|gb|ABY42010.1| protein of unknown function DUF1486 [Bacillus weihenstephanensis
KBAB4]
Length = 179
Score = 37.5 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 10/172 (5%), Positives = 36/172 (20%), Gaps = 2/172 (1%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K + + F + LV + ++ L + + ++ + A +
Sbjct: 3 MKKLFMLLSFFVICIVLVACSGEQKTEIQLLKEMPKPKAMTI-DSSLSKKEATEIVHAAQ 61
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
F + + + + F Q + + + +
Sbjct: 62 RFYAFWDTGKE-ELIPQMVTENFFDNTLPKGRPQGTEGLKLAAQNFRKVVPDIHCEIEDL 120
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
+ + I + + +
Sbjct: 121 LVVGDKVTARLSFTGTHNDKKINFFAIDILHVKDGKITEDWHLEDNLTLKQQ 172
>gi|306841357|ref|ZP_07474061.1| Methyltransferase type 12 [Brucella sp. BO2]
gi|306843936|ref|ZP_07476531.1| Methyltransferase type 12 [Brucella sp. BO1]
gi|306275691|gb|EFM57415.1| Methyltransferase type 12 [Brucella sp. BO1]
gi|306288587|gb|EFM59934.1| Methyltransferase type 12 [Brucella sp. BO2]
Length = 276
Score = 37.5 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 18/190 (9%), Positives = 46/190 (24%), Gaps = 3/190 (1%)
Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
D D E Y +A+ K +F A + + + + +
Sbjct: 3 QSDDKPLDQEALAEAYNRALALEKAGDFDAAAKAYEEVLQI---DPDDHGGAAVRLASMG 59
Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
+A + + +G +R++ + + +
Sbjct: 60 RGAVPLKAPDAYVATLFDQHAEMFDTILVDQLGYDVPLQLREMLLEMDDAFNAERMLDLG 119
Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
++ + + T EV + A+ + D
Sbjct: 120 CGTGLSADALDDMAAHKTGVDISENMIEVAYEKGDYDALFVGEAVRFLESTEEENWDLIV 179
Query: 226 AEEAMARLVE 235
A + + + E
Sbjct: 180 ATDVLPYMGE 189
>gi|113476830|ref|YP_722891.1| hypothetical protein Tery_3314 [Trichodesmium erythraeum IMS101]
gi|110167878|gb|ABG52418.1| Tetratricopeptide TPR_2 [Trichodesmium erythraeum IMS101]
Length = 1240
Score = 37.5 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 30/223 (13%), Positives = 60/223 (26%), Gaps = 21/223 (9%)
Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL-LMSAFVQYSAGKYQQ 112
Y++ +F + +N+ +A F + + P + + + ++ G
Sbjct: 1015 PNQAHIYYQRGEIFFQHKNYQEAKADFTEALQLNPDEAIYFNKRGIARSCLEDYQGGLDD 1074
Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL---MLQYMSRIVERY 169
+ T N Y+YY V Y I D +A Y +
Sbjct: 1075 FTAAITINPTNLDACSNRGYLYYSVIKDYKLAIEDFTTVIQANPKDVDAYNYRGICLYEI 1134
Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE--HAE 227
+ A K G+ AI + +
Sbjct: 1135 QEFYGAIADFTEAIKINPKDANTYYHRAISNYKIGDNQQAIDDCTEAIKLEPTDARYYRN 1194
Query: 228 EAMAR---------------LVEAYVALALMDEAREVVSLIQE 255
AM R + Y D+ +EV+ ++++
Sbjct: 1195 RAMLRYDTEDNQGGLDDLQKAADIYQKQGQNDDYQEVIKMMRK 1237
>gi|319644805|ref|ZP_07999038.1| YrrB protein [Bacillus sp. BT1B_CT2]
gi|317392614|gb|EFV73408.1| YrrB protein [Bacillus sp. BT1B_CT2]
Length = 222
Score = 37.5 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 22/212 (10%), Positives = 51/212 (24%), Gaps = 1/212 (0%)
Query: 61 YEK-AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
Y + + +++ +F KA E F + + V + + +
Sbjct: 9 YNQIGIDAMQKGDFEKAAEAFTKAIDENSGDPVPYINFANLLSAVGELDRALKFYDRAAA 68
Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
+ + Y++ Y + R + K A
Sbjct: 69 LDEKAGAAYYGAGNVYVMKERYQEAKDMFEKAHRTGMENSDLYYMLGTTLVKLEQPKLAM 128
Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
Y+ A Y + +A L AY
Sbjct: 129 PYLQRAAELNDADVEARFHYAMCLANEGMLDEAITEFSNVTERDPSHADAFYNLGVAYAF 188
Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETLVK 271
A ++++ + P + + L++
Sbjct: 189 KEDRKTALDMLNKALDIQPDHMLSIRAKQLLE 220
>gi|325104639|ref|YP_004274293.1| Tetratricopeptide TPR_1 repeat-containing protein [Pedobacter
saltans DSM 12145]
gi|324973487|gb|ADY52471.1| Tetratricopeptide TPR_1 repeat-containing protein [Pedobacter
saltans DSM 12145]
Length = 1008
Score = 37.5 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 25/218 (11%), Positives = 54/218 (24%), Gaps = 23/218 (10%)
Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
Y Y L+ +N+ KA Y ++ + + A
Sbjct: 511 DLYNYANYALGYAALEGENYGKAATYLDKFLKGNEKDQSTINDATLRL---------ADA 561
Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
+ Y + + + + ++ ++ NS
Sbjct: 562 YFGSKNYGAALSYYNRIIASKTSSEDYALFQRGVIEGLMNQPDTKIATLQSLLNKFPNSN 621
Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
Y A F EI Y G+ + ++ Y + + A+ +
Sbjct: 622 YADDAGF--------------EIAYTYFLIGQGEKSRSDLVALIEKYPRSSYVPRALVTI 667
Query: 234 VEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
Y A + + Y A+ L++
Sbjct: 668 GLVYYDQQNDAAALDAFKKVVSEYKSTDEAQQAIKLIE 705
>gi|310822352|ref|YP_003954710.1| hypothetical protein STAUR_5111 [Stigmatella aurantiaca DW4/3-1]
gi|309395424|gb|ADO72883.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
Length = 268
Score = 37.5 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 13/58 (22%), Positives = 27/58 (46%)
Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
F+ ++ NY + + M RL E + L ++AR + + + ++P A E +
Sbjct: 206 FERLINNYPAGDAVLDGMLRLAECRLKLKQPEDARALYTRVITQFPGTAAATQAEQRL 263
>gi|294055046|ref|YP_003548704.1| hypothetical protein Caka_1515 [Coraliomargarita akajimensis DSM
45221]
gi|293614379|gb|ADE54534.1| hypothetical protein Caka_1515 [Coraliomargarita akajimensis DSM
45221]
Length = 565
Score = 37.5 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 36/255 (14%), Positives = 65/255 (25%), Gaps = 13/255 (5%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K F I + G ++ S +Y++A+ L E A
Sbjct: 5 ITKSVPVFFLVILSALISGCVDPETQKANELSAATRLADEGMYDQAMDVLNE----LAAS 60
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
Y N + V +A QQA + Y
Sbjct: 61 YPNDLEVLLTMSKVYEAQGDKTASAFILQTAQQQAPGDQSLLLRTYQAQVAAGQPSVTYL 120
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
A + + L Y+K +IG+
Sbjct: 121 EQIAIQSPENMTPKMWEALGAARAEANQPEAALDAYMKAVATDDFTPSPAS---CAQIGQ 177
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
+L+ A F + S+ A + L+E ++ A V ++ ++P
Sbjct: 178 LFLQLENETQAERWFSTAVE--SEDPSALQGHFGLLEIHLRKKHWPAAEAQVEQLETQFP 235
Query: 259 Q----GYWARYVETL 269
W+ L
Sbjct: 236 GAIAASKWSDVPNEL 250
>gi|229016168|ref|ZP_04173120.1| hypothetical protein bcere0030_7470 [Bacillus cereus AH1273]
gi|229022405|ref|ZP_04178943.1| hypothetical protein bcere0029_7600 [Bacillus cereus AH1272]
gi|228738886|gb|EEL89344.1| hypothetical protein bcere0029_7600 [Bacillus cereus AH1272]
gi|228745122|gb|EEL95172.1| hypothetical protein bcere0030_7470 [Bacillus cereus AH1273]
Length = 179
Score = 37.5 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 10/172 (5%), Positives = 37/172 (21%), Gaps = 2/172 (1%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K + + F + LV + ++ L + + ++ + A +
Sbjct: 3 MKKLFMFLSFFVICIVLVACSGEQKTEIQLLKEMPKPKAMTI-DSSLSKKEATEIVHAAQ 61
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
F + +++ + F Q + + + +
Sbjct: 62 RFYAFWDTGKEG-LIPQTVTENFFDNTLPKGRPQGTEGLKFAAQNFSKVVPDIHCEIEDL 120
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
+ + I + + +
Sbjct: 121 LVAGDKVTARLSFTGTHNDKKINFFAIDILHVKDGKITEDWHLEDNLTLKQQ 172
>gi|260811295|ref|XP_002600358.1| hypothetical protein BRAFLDRAFT_66591 [Branchiostoma floridae]
gi|229285644|gb|EEN56370.1| hypothetical protein BRAFLDRAFT_66591 [Branchiostoma floridae]
Length = 2628
Score = 37.5 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 17/182 (9%), Positives = 44/182 (24%), Gaps = 3/182 (1%)
Query: 71 QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
N+ KA Y + + ++ + Q + Y+ Q E
Sbjct: 2390 GNYQKAISYKDLALNMYRIVYGDTHPVIARSLDNLGTSWIYQDRNQAHIYLQQGLEMTRA 2449
Query: 131 DYVYYLVGMSYAQMIRDVPY-DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
+ +YA + + + + + +
Sbjct: 2450 IFGNAHPNTAYALNNIGHIWWSSDKQDKAISCYQEALMVFRRIHGPSSPHSDIATSLYNV 2509
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
++G + + A+ F+ + + + Y + EAR
Sbjct: 2510 GTVWGKMGDHRKAMSCFEEALQMFKRMFG--PVHPEIANILNNMGATYNEMGNYREARRY 2567
Query: 250 VS 251
+
Sbjct: 2568 LE 2569
>gi|115379501|ref|ZP_01466595.1| tetratricopeptide repeat domain protein [Stigmatella aurantiaca
DW4/3-1]
gi|115363479|gb|EAU62620.1| tetratricopeptide repeat domain protein [Stigmatella aurantiaca
DW4/3-1]
Length = 212
Score = 37.5 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 13/58 (22%), Positives = 27/58 (46%)
Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
F+ ++ NY + + M RL E + L ++AR + + + ++P A E +
Sbjct: 150 FERLINNYPAGDAVLDGMLRLAECRLKLKQPEDARALYTRVITQFPGTAAATQAEQRL 207
>gi|126722973|ref|NP_001075779.1| peptidyl-prolyl cis-trans isomerase FKBP4 [Oryctolagus cuniculus]
gi|122768|sp|P27124|FKBP4_RABIT RecName: Full=Peptidyl-prolyl cis-trans isomerase FKBP4;
Short=PPIase FKBP4; AltName: Full=52 kDa FK506-binding
protein; Short=52 kDa FKBP; Short=FKBP-52; AltName:
Full=59 kDa immunophilin; Short=p59; AltName:
Full=FK506-binding protein 4; Short=FKBP-4; AltName:
Full=FKBP59; AltName: Full=HSP-binding immunophilin;
Short=HBI; AltName: Full=Immunophilin FKBP52; AltName:
Full=Rotamase; Contains: RecName: Full=Peptidyl-prolyl
cis-trans isomerase FKBP4, N-terminally processed
gi|165593|gb|AAA31438.1| p59 protein [Oryctolagus cuniculus]
gi|165595|gb|AAA31439.1| hsp90 binding protein [Oryctolagus cuniculus]
Length = 458
Score = 37.5 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 29/191 (15%), Positives = 60/191 (31%), Gaps = 5/191 (2%)
Query: 74 SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
KA + + + + + + + + ES +
Sbjct: 205 EKAIQRMEKGEHSILYLKPSYAFGNAGKEKFQIPPYAELKYEVHLKSFEKAKESWEMSSE 264
Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
L + + V + + K L +IV + + +LA+
Sbjct: 265 EKLEQSAIVKERGTVYFKEGKYKQALLQYKKIV-SWLEYESSFSSEEVQKAQALRLASHL 323
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+ +LK + AA+ L S+ E+ + R EA++A+ D AR +
Sbjct: 324 -NLAMCHLKLQAFSAAVESCNKALELDSN---NEKGLFRRGEAHLAVNDFDLARADFQKV 379
Query: 254 QERYPQGYWAR 264
+ YP A+
Sbjct: 380 LQLYPSNKAAK 390
>gi|57168717|ref|ZP_00367849.1| probable periplasmic protein Cj0114 [Campylobacter coli RM2228]
gi|305432655|ref|ZP_07401816.1| conserved hypothetical protein [Campylobacter coli JV20]
gi|57019998|gb|EAL56678.1| probable periplasmic protein Cj0114 [Campylobacter coli RM2228]
gi|304444366|gb|EFM37018.1| conserved hypothetical protein [Campylobacter coli JV20]
Length = 317
Score = 37.5 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 12/87 (13%), Positives = 30/87 (34%)
Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
Y+ + + A +G K+ +Y AI ++ A + ++ + + +
Sbjct: 227 NYLISKQYKPARANFWLGEIEYKQKKYNNAIAYYKKSSALSTKGDYFPKLLYHTAISLDK 286
Query: 240 LALMDEAREVVSLIQERYPQGYWARYV 266
+ A ++ YP A+
Sbjct: 287 IGDPKTANGFYKALKTNYPNSPEAKAS 313
>gi|315637612|ref|ZP_07892818.1| conserved hypothetical protein [Arcobacter butzleri JV22]
gi|315478066|gb|EFU68793.1| conserved hypothetical protein [Arcobacter butzleri JV22]
Length = 313
Score = 37.5 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 15/92 (16%), Positives = 32/92 (34%)
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
+ + A +G + KR +Y AI F+ A + + ++
Sbjct: 219 YEKLIEVNYKPAENNFYLGEMWYKRKKYDTAISHFKKSAMLNDKAAYMPTLLLHSAISFE 278
Query: 239 ALALMDEAREVVSLIQERYPQGYWARYVETLV 270
+ + A+ + E YP A+ +T +
Sbjct: 279 NVKDKENAKSFYGTLIELYPNSSEAKEAKTKL 310
>gi|296211098|ref|XP_002752266.1| PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP4 [Callithrix
jacchus]
Length = 459
Score = 37.5 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 32/233 (13%), Positives = 76/233 (32%), Gaps = 14/233 (6%)
Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQN---------FSKAYEYFNQCSRDFPFAG 91
+ + ++ + Y+ +++++ L + +A + + +
Sbjct: 163 KPNEGAIVEVALEGYYKDQLFDQRELRFEIGEGENLDLPYGLERAIQRMEKGEHSIVYLK 222
Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151
+ + + L + + ES ++ L + + V +
Sbjct: 223 PSYAFGKVGKEKLQIPPNAELKYELHLKSFEKAKESWEMNSEEKLEQSTIVKERGTVYFK 282
Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
+ K L +IV + + +LA+ + +LK + AAI
Sbjct: 283 EGKYKQALLQYKKIV-SWLEYESSFSSEEAQKAQALRLASHL-NLAMCHLKLQAFSAAIG 340
Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
L S+ E+ + R EA++A+ D AR + + YP A+
Sbjct: 341 SCNKALELDSN---NEKGLFRRGEAHLAVNDFDLARADFQKVLQLYPNNKAAK 390
>gi|288957827|ref|YP_003448168.1| hypothetical protein AZL_009860 [Azospirillum sp. B510]
gi|288910135|dbj|BAI71624.1| hypothetical protein AZL_009860 [Azospirillum sp. B510]
Length = 307
Score = 37.5 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 18/123 (14%), Positives = 40/123 (32%), Gaps = 8/123 (6%)
Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
T + YE+A L+ ++ +A + A + Y
Sbjct: 173 PPSTAGLSPEKQYEQAFELLRNSDYDRAEKALQDFIAKNKSHAYAGNAQYWLGESYYVRN 232
Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
K+ +AA E +++Y + +GM+ QM R ++++ +
Sbjct: 233 KFPEAAQAFGEVLSKYRTNPKAADSLLKLGMTLQQMNRKS--------DACTAFNQLMSK 284
Query: 169 YTN 171
+
Sbjct: 285 FPE 287
>gi|224418456|ref|ZP_03656462.1| TPR repeat-containing protein [Helicobacter canadensis MIT 98-5491]
gi|253827772|ref|ZP_04870657.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
gi|253511178|gb|EES89837.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
Length = 432
Score = 37.5 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 32/257 (12%), Positives = 75/257 (29%), Gaps = 8/257 (3%)
Query: 18 QLYKFALTIFFS---IAVCFLVGWERQSSRDVYLDSVTDVRYQREVY-EKAVLFLKEQNF 73
L K + I LVG + D ++ ++ ++Y +A L Q++
Sbjct: 1 MLLKNKILIILVSGVCLFLVLVGCLPRIKIDFSNNTYKEIENLEDIYIVQAYAALDSQDY 60
Query: 74 SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN-VDY 132
A E + ++ + + + A + +Y + ++
Sbjct: 61 KVAQENLTKAYELTKNEAYLKEIIGILILKKEWAEAKKIVLEYQRKYPKDREMQQMLIEI 120
Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
+ + A Q L+ S I + +
Sbjct: 121 LGNMGDFKAANQEVQKLLKQDRNAQNLEIASSIYFLQNDYQKAIAYLRESYLLSGNEQIA 180
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
Y L + AI ++ + Y +++ E RL Y+ + +A +
Sbjct: 181 NKLASIYLLFLKDRNKAIGVYEEHIKKYGISQNIGE---RLALVYLEDKKVLDAARIYQN 237
Query: 253 IQERYPQGYWARYVETL 269
+ + +AR+ +
Sbjct: 238 LYKATHDSKYARFALEI 254
>gi|206976376|ref|ZP_03237283.1| putative ABC transporter, substrate-binding protein [Bacillus
cereus H3081.97]
gi|217962448|ref|YP_002341020.1| putative ABC transporter, substrate-binding protein [Bacillus
cereus AH187]
gi|206745300|gb|EDZ56700.1| putative ABC transporter, substrate-binding protein [Bacillus
cereus H3081.97]
gi|217066169|gb|ACJ80419.1| putative ABC transporter, substrate-binding protein [Bacillus
cereus AH187]
Length = 270
Score = 37.5 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 12/70 (17%), Positives = 22/70 (31%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K LT S ++ L + + L E+ EKA L+++ +
Sbjct: 1 MKKLLLTALISTSIFGLAACGGKDKDEKKLVVGASNVPHAEILEKAKPLLEKKGIELEVK 60
Query: 79 YFNQCSRDFP 88
F
Sbjct: 61 KFQDYVLPNK 70
>gi|330506685|ref|YP_004383113.1| TPR-repeat-containing protein [Methanosaeta concilii GP-6]
gi|328927493|gb|AEB67295.1| TPR-repeat protein [Methanosaeta concilii GP-6]
Length = 705
Score = 37.5 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 22/232 (9%), Positives = 56/232 (24%), Gaps = 4/232 (1%)
Query: 29 SIAVCFLVGWER--QSSRDVYLDSVTDVRYQREVY-EKAVLFLKEQNFSKAYEYFNQCSR 85
+++C L+ S + + Y +A+ + + ++ A E N
Sbjct: 15 VLSICLLLTCALILFESAPTSATTGGTSIPNSDFYLREAMNYSQNGSYPLALERINLSLE 74
Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
A F + ++ E+ ++ + Y
Sbjct: 75 IDDELAEAWLLKGRILFGLGYLQEAIRSLDQVLRIDQSLDEAWSLKGEIMMETGRYRMAQ 134
Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
R + +R+ + A + A +
Sbjct: 135 LCFDSALRLDPGNMTLYNRLAQSQLMLEDYDHALRSYKKALSLEANNTEILFNQGDLFLT 194
Query: 206 YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA-REVVSLIQER 256
+ A+ E Y L +D A + +++++
Sbjct: 195 LARYPEALNSFNLLLEQNKSDILALKGRAECYRQLGQVDRAEEDYYTVLEKN 246
>gi|323436017|ref|ZP_01049747.2| conserved hypothetical protein [Dokdonia donghaensis MED134]
gi|321496332|gb|EAQ39719.2| conserved hypothetical protein [Dokdonia donghaensis MED134]
Length = 845
Score = 37.5 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 27/234 (11%), Positives = 57/234 (24%), Gaps = 15/234 (6%)
Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
+ + SI V LV R+ + + +Y + L E
Sbjct: 1 MIILLRRILCTSILVLILVSCSRKKDSFISRNYHAVTTEFNTLYN-GNVALDEGK----- 54
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
N + F + +F + ++ + + + + +
Sbjct: 55 ---NALIQTFDDNYWEVLPIERISFEENTSLGEENRDPNFVRAEEKAIK----AIQRHSM 107
Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
+ + + + + V YV KE
Sbjct: 108 KIDGEERNPQMDEAFLLLGKARYFDQQFVPALEAFNYVLAYYPKSNNIAQAKVWKEKTNI 167
Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
R F++ + +AM L +AY+ L D A +
Sbjct: 168 RLENNEIAIENLNKIFKVEKNLKNQDIADAKAM--LAQAYLNLNKPDSALIYIK 219
Score = 37.1 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 27/210 (12%), Positives = 63/210 (30%), Gaps = 3/210 (1%)
Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
+E + LK + + + ++ + F A A A + G+
Sbjct: 423 AYFENYIAELKAKEAADSIARVDKIRNNEFFNSNASTRKKTQAAPGEFYFYNDVAVAYGK 482
Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
+ + + + + L + Q + + + +
Sbjct: 483 QAFERRWGKRRLADGWRLSSKQTPASNGGPLPVVLQEEEETQKKT---AQDYIATLPRDK 539
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
++ + + A Y K EY A R + +L+ D + A L + Y
Sbjct: 540 TQIDSLIKERDFAYFQLGLIYKEKFKEYPLAASRLEKLLSFKPDEKLVLPATYNLYQVYD 599
Query: 239 ALALMDEAREVVSLIQERYPQGYWARYVET 268
++ +A + I +YP +A +
Sbjct: 600 SMGAFAKAETYKNEITTKYPDSRYATRINN 629
>gi|310818016|ref|YP_003950374.1| tetratricopeptide repeat-containing protein [Stigmatella aurantiaca
DW4/3-1]
gi|309391088|gb|ADO68547.1| Tetratricopeptide repeat family protein [Stigmatella aurantiaca
DW4/3-1]
Length = 1064
Score = 37.5 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 20/237 (8%), Positives = 52/237 (21%), Gaps = 29/237 (12%)
Query: 32 VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91
+ ++ + + + Y++AV + ++ A E
Sbjct: 8 MAVILLCCAAGTVKADEPGNARLLEAQTAYDEAVKLFEAGKYADALE------------- 54
Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151
R + G + A + + L+ + +
Sbjct: 55 --RSKHSLLLREAELGGAHPDVAKCVALLGILHWTQGDYVQAEPLIQRGLEIREAALGKN 112
Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV-EIGRYYLKRGEYVAAI 210
L ++ + + R + K ++ A
Sbjct: 113 HPDVASSLNNLANLYMNQGLFARAESLHERAIAIREEALGKNHPDVASSLNNLANLYRAQ 172
Query: 211 PRFQLVLANYSDAEHAEEA------------MARLVEAYVALALMDEARE-VVSLIQ 254
+ + + +EA + L Y+ L L A +
Sbjct: 173 GLYGRAEPLFQRSIAIKEAAFGKNHPKVASSLNNLANIYMNLELYARAEPLYARALA 229
>gi|115374236|ref|ZP_01461522.1| tetratricopeptide repeat family [Stigmatella aurantiaca DW4/3-1]
gi|115368779|gb|EAU67728.1| tetratricopeptide repeat family [Stigmatella aurantiaca DW4/3-1]
Length = 1057
Score = 37.5 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 20/237 (8%), Positives = 52/237 (21%), Gaps = 29/237 (12%)
Query: 32 VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91
+ ++ + + + Y++AV + ++ A E
Sbjct: 1 MAVILLCCAAGTVKADEPGNARLLEAQTAYDEAVKLFEAGKYADALE------------- 47
Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151
R + G + A + + L+ + +
Sbjct: 48 --RSKHSLLLREAELGGAHPDVAKCVALLGILHWTQGDYVQAEPLIQRGLEIREAALGKN 105
Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV-EIGRYYLKRGEYVAAI 210
L ++ + + R + K ++ A
Sbjct: 106 HPDVASSLNNLANLYMNQGLFARAESLHERAIAIREEALGKNHPDVASSLNNLANLYRAQ 165
Query: 211 PRFQLVLANYSDAEHAEEA------------MARLVEAYVALALMDEARE-VVSLIQ 254
+ + + +EA + L Y+ L L A +
Sbjct: 166 GLYGRAEPLFQRSIAIKEAAFGKNHPKVASSLNNLANIYMNLELYARAEPLYARALA 222
>gi|289522776|ref|ZP_06439630.1| transglycosylase, SLT family [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
gi|289504612|gb|EFD25776.1| transglycosylase, SLT family [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
Length = 640
Score = 37.5 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 27/211 (12%), Positives = 58/211 (27%), Gaps = 5/211 (2%)
Query: 64 AVLFLKEQNFSKAYEYFNQCS---RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
++ KA E+ + + A R L A +
Sbjct: 193 GHAAFLNGDYRKAVEFLKKVDESSPSWKKAYYYRAYALYRLKNYEEAAALWGELAKKGGD 252
Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
+ + + + D + L ++ E ++ K
Sbjct: 253 YSVASVGRLATLARLGNATAIEILKNLAAPDGETARAALYHLISFYEDSGDNATAKALTV 312
Query: 181 YVTVGRNQLAAKEVEIGRYY--LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
+ G++ + ++ + K + + A F DA A + A
Sbjct: 313 RLLSGKDDFYSMKLLWRMGWKFWKEKDNLNAAEFFIRASTYKGDALWASRNLYWAARALE 372
Query: 239 ALALMDEAREVVSLIQERYPQGYWARYVETL 269
+EA ++ I+ YP Y+ VE +
Sbjct: 373 ESGNTEEALKLKDQIKANYPLSYYGLLVENI 403
>gi|254701811|ref|ZP_05163639.1| Methyltransferase type 12 [Brucella suis bv. 5 str. 513]
gi|261752368|ref|ZP_05996077.1| methyltransferase type 12 [Brucella suis bv. 5 str. 513]
gi|261742121|gb|EEY30047.1| methyltransferase type 12 [Brucella suis bv. 5 str. 513]
Length = 276
Score = 37.5 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 18/190 (9%), Positives = 46/190 (24%), Gaps = 3/190 (1%)
Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
D D E Y +A+ K +F A + + + + +
Sbjct: 3 QSDDKPLDQEALAEAYNRALALEKAGDFDAAAKAYEEVLQI---DPDDHGGAAVRLASMG 59
Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
+A + + +G +R++ + + +
Sbjct: 60 RGAVPLKAPDAYVATLFDQHAEMFDTILVDQLGYDVPLQLREMLLEMDDAFNAERMLDLG 119
Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
++ + + T EV + A+ + D
Sbjct: 120 CGTGLSADALDDMAAHKTGVDISENMIEVAYEKGDYDALFVGEAVRFLESTEEENWDLIV 179
Query: 226 AEEAMARLVE 235
A + + + E
Sbjct: 180 ATDVLPYMGE 189
>gi|251772661|gb|EES53225.1| putative TPR-domain containing protein [Leptospirillum
ferrodiazotrophum]
Length = 280
Score = 37.5 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 30/249 (12%), Positives = 60/249 (24%), Gaps = 15/249 (6%)
Query: 27 FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86
+ + L S + E Y + L+ A+ F +
Sbjct: 16 CLIMGLALLSSC-------QRGVSPRNHHMAIEHYNGGLRNLRNHQLQAAFWEFEYANHL 68
Query: 87 FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146
P SL ++ + + ++ + N L Y + +
Sbjct: 69 DPDIPKVHYSLGHVYYLMHDLTDARNEFLRALKHNDDPSSTYNYLGKIALERKQYQEALI 128
Query: 147 DVPYDQRATKLMLQYM-----SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
D T Y ++ K + ++ +G+ ++
Sbjct: 129 DFHKALENTLNKTPYYPLTNIGKVYMLTGKFEKAKEYFAKAILRNDRFLPAYFWLGKVHM 188
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
G Y AI F + L AY+ L A E + P
Sbjct: 189 SEGAYEKAIGDFSETIRLAPGFSS---GYFELGRAYLKLEDQKRATEAFTEAVRLDPTSK 245
Query: 262 WARYVETLV 270
+ +
Sbjct: 246 VGVRAKRYL 254
>gi|188996311|ref|YP_001930562.1| Tetratricopeptide TPR_2 repeat protein [Sulfurihydrogenibium sp.
YO3AOP1]
gi|188931378|gb|ACD66008.1| Tetratricopeptide TPR_2 repeat protein [Sulfurihydrogenibium sp.
YO3AOP1]
Length = 938
Score = 37.5 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 23/216 (10%), Positives = 41/216 (18%), Gaps = 5/216 (2%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
D KA + KA Y + ++
Sbjct: 425 DKDFVKAERFLNKASESKNSEIRKKALIYLAEIYLINKDDENFVNTVSQLKEFDQIYAYD 484
Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
Q D V A + V + +
Sbjct: 485 LLGWYFYLNGDYQNAFKAFKDPYMKAVSAFNAGDLEAVKNIIQNRNDRKSKFLLVYVYIK 544
Query: 171 NSPYVK-----GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
+ K + A + + L D +
Sbjct: 545 ENDLEKAREVLKELLNGDDLIAKKAYYLYAYTFFSSGDFVRASQEFSKFLEKYKNDDDIY 604
Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
+A+ RL ++Y L D A + +Y
Sbjct: 605 TRKALLRLADSYYNLGERDLAVNIYKDFITKYSGTK 640
>gi|317154864|ref|YP_004122912.1| cell wall hydrolase/autolysin [Desulfovibrio aespoeensis Aspo-2]
gi|316945115|gb|ADU64166.1| cell wall hydrolase/autolysin [Desulfovibrio aespoeensis Aspo-2]
Length = 614
Score = 37.5 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 13/68 (19%), Positives = 22/68 (32%), Gaps = 7/68 (10%)
Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA-------LMDEAREVVSLIQERY 257
+ RF L D +A +A+ + + L A + + RY
Sbjct: 60 NWEKVEQRFSQCLRADPDGPNAPKALYYIGRVHEELGVQSGSGADFRRAIDYFGRVVSRY 119
Query: 258 PQGYWARY 265
P+ WA
Sbjct: 120 PRHGWADD 127
Score = 37.5 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 16/130 (12%), Positives = 38/130 (29%), Gaps = 1/130 (0%)
Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
++ +R++ + E+G
Sbjct: 42 HAEFHTLIKDPRKAKYRANWEKVEQRFSQCLRADPDGPNAPKALYYIGRVHEELGVQSGS 101
Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY-VALALMDEAREVVSLIQERYPQGY 261
++ AI F V++ Y A++ + R + L + AR ++ I YP+
Sbjct: 102 GADFRRAIDYFGRVVSRYPRHGWADDCLYRRADINARRLKETEAARLDLARILVEYPRSD 161
Query: 262 WARYVETLVK 271
+ ++
Sbjct: 162 MYAKADAALR 171
>gi|319954563|ref|YP_004165830.1| tetratricopeptide tpr_1 repeat-containing protein [Cellulophaga
algicola DSM 14237]
gi|319423223|gb|ADV50332.1| Tetratricopeptide TPR_1 repeat-containing protein [Cellulophaga
algicola DSM 14237]
Length = 710
Score = 37.5 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 29/251 (11%), Positives = 60/251 (23%), Gaps = 27/251 (10%)
Query: 17 YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76
Y + KF L I L TD L++ +F KA
Sbjct: 20 YSMRKFILIIPILFCQLLLS--------------QTDDMT------NGFKLLEKGDFEKA 59
Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
+F + ++P A+ + + K E + +L
Sbjct: 60 ETFFKEYLGEYPDNKTAKLCYGRAVGLSGDPEKANAMFKSLLVEYPGDFEIQINYNESFL 119
Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196
Y++ + +N A V
Sbjct: 120 WDKKYSEAEPLYEELVSENPENFGAVLGYANTLSNLKKYSKALVMVNRAIALQPENVSAK 179
Query: 197 GRYYLKRGEYVAAIPRFQLVL-------ANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
+ Y + Q ++D +A+ L Y+ + ++A+ +
Sbjct: 180 VSRKYMKLGYANSYVNNQEYQKGINYLNEIFTDFPEDRDALLNLANVYLIIKETEKAKNI 239
Query: 250 VSLIQERYPQG 260
+ +
Sbjct: 240 YTRLAISPKDS 250
>gi|123498307|ref|XP_001327376.1| TPR Domain containing protein [Trichomonas vaginalis G3]
gi|121910304|gb|EAY15153.1| TPR Domain containing protein [Trichomonas vaginalis G3]
Length = 723
Score = 37.5 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 16/199 (8%), Positives = 52/199 (26%), Gaps = 6/199 (3%)
Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
+Y V+ + +A + F + +R P A + +
Sbjct: 433 VEALYNLGVVSKMTGQYDEALQVFEKLNRIIPKAPEVAFEISDCYEKAGMNVNAIEWLHR 492
Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT---KLMLQYMSRIVERYTNSP 173
+ P + + +Q + ++Q++ + +
Sbjct: 493 LINIQPKDPAIWRRIGAIWDRDQNESQAFHCYTESYKFCPSDIDVIQWLGSYFRKKQSYD 552
Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
+ + + + + A+ ++ V+ + + E + +L
Sbjct: 553 QALKFFERAAELAPKQPRYLMMVASCHRNMDQKQEALAAYEKVMQLDPNNKQCLEHLIKL 612
Query: 234 VEAYVALALMDEAREVVSL 252
+ L +A +
Sbjct: 613 T---TEMGLTQKADLYQRM 628
>gi|28211155|ref|NP_782099.1| hypothetical protein CTC01479 [Clostridium tetani E88]
gi|28203595|gb|AAO36036.1| hypothetical protein CTC_01479 [Clostridium tetani E88]
Length = 193
Score = 37.5 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 8/39 (20%), Positives = 14/39 (35%)
Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRY 56
++ K L F I + LVG + +S +
Sbjct: 4 RMKKIILLAVFVITIISLVGCSSDKKDNTSQNSKSIQST 42
>gi|253702403|ref|YP_003023592.1| hypothetical protein GM21_3815 [Geobacter sp. M21]
gi|251777253|gb|ACT19834.1| TPR repeat-containing protein [Geobacter sp. M21]
Length = 399
Score = 37.5 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 28/193 (14%), Positives = 55/193 (28%), Gaps = 6/193 (3%)
Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
+ F +++++++A + P A K L + Q + +
Sbjct: 36 GLAFYQKKDYARATSELKRAISMDPTNTQAYKYLAGAYQAQGKTDEAIKTYKYSLALDPT 95
Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYD---QRATKLMLQYMSRIVERYTNSPYVKGARF 180
YL Y R+ L + ++ + +
Sbjct: 96 QASVHTSLGNVYLQQKKYNLAEREFKDAGKLDPTDTLAPYTLGQLYVQTERYGEAEAQFK 155
Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
V+ +G Y K G+Y A+ + + E A L AY AL
Sbjct: 156 KVSRMAPTDPNPYYSLGAVYNKEGKYADAVKQLTQAVKLRPK---MEAAHFELGVAYAAL 212
Query: 241 ALMDEAREVVSLI 253
A++ V +
Sbjct: 213 GDTTNAQKEVDTL 225
>gi|309388802|gb|ADO76682.1| Tetratricopeptide TPR_1 repeat-containing protein [Halanaerobium
praevalens DSM 2228]
Length = 429
Score = 37.5 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 11/116 (9%), Positives = 29/116 (25%)
Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
+ + + I + + + + + Y R +Y +
Sbjct: 270 MKYQKEENFLTLEDIKKLTQKEKTKEELISANNYLETKTEQQLFNLALDYFSRSDYQNSS 329
Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
F + E++ L +Y + A + YP+ +
Sbjct: 330 DIFNSIYNLSETDYLKRESLFLLARSYEKMEAYQSAEHFYRIYLNEYPESNYYDEA 385
Score = 35.2 bits (78), Expect = 9.3, Method: Composition-based stats.
Identities = 15/75 (20%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
R Y K Y +A +++ L Y ++ + +EA+ L L +++E+++ ++E
Sbjct: 353 ARSYEKMEAYQSAEHFYRIYLNEYPESNYYDEALYNLGLMLEEAGLEKKSKEILTRLREE 412
Query: 257 YPQGYWAR-YVETLV 270
P + V ++
Sbjct: 413 VPYSKYNNSKVYNIL 427
>gi|255321355|ref|ZP_05362515.1| tetratricopeptide repeat domain protein [Campylobacter showae
RM3277]
gi|255301508|gb|EET80765.1| tetratricopeptide repeat domain protein [Campylobacter showae
RM3277]
Length = 790
Score = 37.5 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 10/96 (10%), Positives = 31/96 (32%)
Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231
Y + A ++ + + + + E+ E +
Sbjct: 201 RRYPNSIFASEFLLYRLRALDKILDSQNSFDGLGAADVASEGRAWMRRFVSDENYPEVLY 260
Query: 232 RLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
+ +AY+ L+ +A + +++ +P + + E
Sbjct: 261 LVTKAYLRQELVSDANYTLDILKSEHPNSNFTKLAE 296
>gi|255656023|ref|ZP_05401432.1| putative lipoprotein [Clostridium difficile QCD-23m63]
Length = 218
Score = 37.5 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 14/96 (14%), Positives = 30/96 (31%), Gaps = 12/96 (12%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
+ + + SI FLVG ++ L + +L++ N+ KA E
Sbjct: 1 MRGRVILLISILSIFLVGCSFNKKDEINLVE------------QGKTYLEKHNYKKAMES 48
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
+ + AR + + + +
Sbjct: 49 LSSALEEDSTNENARAMYMQAMRMSNMTEFEELKNY 84
>gi|157149134|ref|YP_001456453.1| cellulose synthase subunit BcsC [Citrobacter koseri ATCC BAA-895]
gi|157086339|gb|ABV16017.1| hypothetical protein CKO_04973 [Citrobacter koseri ATCC BAA-895]
Length = 1194
Score = 37.5 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 36/232 (15%), Positives = 75/232 (32%), Gaps = 14/232 (6%)
Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90
A F+ + +D + + ++A + N+++A E + P +
Sbjct: 471 ASAFIASLSSRQR--QSIDDIERSLENDRLAQQAEALENQGNWAQAAELHRRRLALDPGS 528
Query: 91 GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150
L ++AG+ QA + Q P + Y Y L Q + +
Sbjct: 529 VWVTYRLSRDL---WNAGQRSQADAHMRALARQKPNDPDQVYAYGLYLAGNDQDRAAMAH 585
Query: 151 DQRATK-LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA----AKEVEIGRYYLKRGE 205
+ + + +R N+ ++ A G+ + A ++ R L +
Sbjct: 586 INNLPRSQWNSNIQELADRLQNNQVLETASRLRDSGKEREAETLLRQQPASTRIDLTLAD 645
Query: 206 YVAAIPRFQLVLANYSDAEHAE----EAMARLVEAYVALALMDEAREVVSLI 253
+ + A Y E +A L E Y+A AR ++ +
Sbjct: 646 WAQQRRDYSSARAAYDAVLAREPGNVDARLGLTEVYIAQGDNAAARAELAKL 697
>gi|308175004|ref|YP_003921709.1| methionine ABC transporter binding lipoprotein [Bacillus
amyloliquefaciens DSM 7]
gi|307607868|emb|CBI44239.1| methionine ABC transporter (binding lipoprotein) [Bacillus
amyloliquefaciens DSM 7]
gi|328554972|gb|AEB25464.1| methionine ABC transporter (binding lipoprotein) [Bacillus
amyloliquefaciens TA208]
gi|328913326|gb|AEB64922.1| methionine ABC transporter (binding lipoprotein) [Bacillus
amyloliquefaciens LL3]
Length = 271
Score = 37.5 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 10/70 (14%), Positives = 21/70 (30%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K L+ + L S + E+ ++A LKE+ ++ +
Sbjct: 1 MKKIVLSALLLVFAGVLAACGSNGSNKKEIVVAATKTPHAEILKEAEPLLKEKGYTLTVK 60
Query: 79 YFNQCSRDFP 88
N
Sbjct: 61 VLNDYKMYNK 70
>gi|297833104|ref|XP_002884434.1| hypothetical protein ARALYDRAFT_896453 [Arabidopsis lyrata subsp.
lyrata]
gi|297330274|gb|EFH60693.1| hypothetical protein ARALYDRAFT_896453 [Arabidopsis lyrata subsp.
lyrata]
Length = 977
Score = 37.5 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 28/204 (13%), Positives = 58/204 (28%), Gaps = 9/204 (4%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
A ++++ FS+A + Q P A +L Q +
Sbjct: 160 NLASAYMRKGRFSEATQCCQQALSLNPLLVDAHSNLGNLMKAQGLIHEAYSCYLEAVRIQ 219
Query: 122 ---TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
+ ++ Q ++ + A + + +
Sbjct: 220 PTFAIAWSNLAGLFMESGDLNRALQYYKEAVKLKPAFPDAYLNLGNVYKALGRPTEAIMC 279
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
+ R A I Y ++G+ AI ++ ++ EA L A
Sbjct: 280 YQHALQMRPNCAMAFGNIASIYYEQGQLDLAIRHYKQAISRDPRFL---EAYNNLGNALK 336
Query: 239 ALALMDEAREVVS---LIQERYPQ 259
+ +DEA + +Q +PQ
Sbjct: 337 DIGRVDEAIRCYNQCLALQPNHPQ 360
>gi|293603402|ref|ZP_06685829.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
43553]
gi|292818175|gb|EFF77229.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
43553]
Length = 228
Score = 37.5 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 9/77 (11%), Positives = 28/77 (36%)
Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
++ Y+ A+ ++ + A E + +P + +A + +Y ++ A
Sbjct: 106 QEQAAYDGAMDLFRKGQYKDAAESLAAFTALYPNSQLAPSAQFYLGSSRYGMKDFKGAIE 165
Query: 116 LGEEYITQYPESKNVDY 132
+ + P++
Sbjct: 166 QLTAMVQKSPDNARAPD 182
Score = 37.5 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 12/79 (15%), Positives = 29/79 (36%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ +G ++ AI + ++ D A +A+ + + L A+ +
Sbjct: 147 QFYLGSSRYGMKDFKGAIEQLTAMVQKSPDNARAPDALLIIAGGQIELNNRAGAKATLQR 206
Query: 253 IQERYPQGYWARYVETLVK 271
I YP A ++ ++
Sbjct: 207 IVRDYPNAQAASTAKSRLQ 225
>gi|291566530|dbj|BAI88802.1| TPR domain protein [Arthrospira platensis NIES-39]
Length = 1687
Score = 37.5 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 22/231 (9%), Positives = 49/231 (21%), Gaps = 6/231 (2%)
Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
+ ++ + + L+E+ F +A Q P L
Sbjct: 898 SASQEKLEIPQTIAEPLSDMVA--QVEANLQEKQFQQALSLCQQVLALDPETANIYALLG 955
Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM---IRDVPYDQRAT 155
+ + A + + + Q Q
Sbjct: 956 KALLGMKRLPEAVAAFEKAVQLNPEDATIHTNLGSLAARMQGWEQAIKCYERAIALQPDL 1015
Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
+ + ++ + R+ + + + +
Sbjct: 1016 VAAHRNLGKVWHKLGKPQQAVSCRYQALILQPEEGEVSEFLAVGNSLLQSGRLQEAEVCY 1075
Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
+ H +A L E A L EA E P + +R
Sbjct: 1076 -RQVVRRSPHDSQAYHNLGEVLSAQGLWSEAEAAYRRAVELQPDSFESRNS 1125
>gi|228988916|ref|ZP_04148965.1| hypothetical protein bthur0001_55490 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|228770830|gb|EEM19346.1| hypothetical protein bthur0001_55490 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
Length = 328
Score = 37.5 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 19/137 (13%), Positives = 41/137 (29%), Gaps = 15/137 (10%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFL---------- 68
+ + IF + F+ G Y D Q E KAV +
Sbjct: 1 MLRLKFVIFLLPLILFVSGCGNTKDETKY---EKDFLTQVEAISKAVSKMTKIQKGDQSL 57
Query: 69 --KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126
++ + +A + + F K + S +Y+ + S + ++
Sbjct: 58 TSSQKEYKEALMELKEVIKGFKELVPDSKYEYQQKQLIKSMDEYESSISKLLKGMSDTKG 117
Query: 127 SKNVDYVYYLVGMSYAQ 143
S+ +D + +
Sbjct: 118 SEWIDGIEQFNKATDMY 134
>gi|328948719|ref|YP_004366056.1| hypothetical protein Tresu_1870 [Treponema succinifaciens DSM 2489]
gi|328449043|gb|AEB14759.1| hypothetical protein Tresu_1870 [Treponema succinifaciens DSM 2489]
Length = 299
Score = 37.5 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 13/68 (19%), Positives = 25/68 (36%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
E + GR G+ +A+ Y +++ A+ + E + + AR +
Sbjct: 107 EYQRGRALHSIGQNDSAVMALGSFCNEYPESKMYSSALYWIAECFYEDYDYETARSLYER 166
Query: 253 IQERYPQG 260
I YP
Sbjct: 167 IIYEYPDS 174
>gi|212692821|ref|ZP_03300949.1| hypothetical protein BACDOR_02320 [Bacteroides dorei DSM 17855]
gi|212664610|gb|EEB25182.1| hypothetical protein BACDOR_02320 [Bacteroides dorei DSM 17855]
Length = 585
Score = 37.5 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 24/226 (10%), Positives = 64/226 (28%), Gaps = 5/226 (2%)
Query: 39 ERQSSRDVYLDSVTDVRYQRE-----VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93
S ++ + ++ + +A+ ++ + A+E ++ C +P
Sbjct: 12 SGVSGNKTVVEEKDPLTPEQRRKYDYFFLEALRMKEKGDLDAAFEMYSHCLDIYPQGAAT 71
Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153
+ K ++A + + K YY +Y + I
Sbjct: 72 LFEISRFHMFLNQPEKGEEALKKAVDADPKSFWYKQTLAAYYQGKGNYPKAIYVYEDMAS 131
Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213
L+ + +++ YT + + + E + F
Sbjct: 132 QFPSRLEPLMALIDLYTRTKDYQQVVNTLNRLEALDGKSEQISMEKFRMYLAMNNDQQAF 191
Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
+ + + + L + Y+ +EA E + + P
Sbjct: 192 TEIENLAKEYPYDMRYLTILGDVYLNNGKEEEAYETYQKVLKEEPG 237
>gi|332716441|ref|YP_004443907.1| hypothetical protein AGROH133_12011 [Agrobacterium sp. H13-3]
gi|325063126|gb|ADY66816.1| hypothetical protein AGROH133_12011 [Agrobacterium sp. H13-3]
Length = 330
Score = 37.5 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 15/72 (20%), Positives = 28/72 (38%)
Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
+ A +G +G++ A F Y + A E + +L + AL + A
Sbjct: 241 KAADASFWLGEAQYSQGKFNEAAKTFLNGHQTYGKSPKAPEMLMKLGMSLAALDNTETAC 300
Query: 248 EVVSLIQERYPQ 259
+ + +RYP
Sbjct: 301 ATLREVPKRYPS 312
>gi|189024222|ref|YP_001934990.1| SAM (and some other nucleotide) binding motif [Brucella abortus
S19]
gi|260545270|ref|ZP_05821011.1| SAM binding domain-containing protein [Brucella abortus NCTC 8038]
gi|189019794|gb|ACD72516.1| SAM (and some other nucleotide) binding motif [Brucella abortus
S19]
gi|260096677|gb|EEW80552.1| SAM binding domain-containing protein [Brucella abortus NCTC 8038]
Length = 276
Score = 37.5 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 18/190 (9%), Positives = 46/190 (24%), Gaps = 3/190 (1%)
Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
D D E Y +A+ K +F A + + + + +
Sbjct: 3 QSDDKPLDQEALAEAYNRALALEKAGDFDAAAKAYEEVLQIA---PDDHGGAAVRLASMG 59
Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
+A + + +G +R++ + + +
Sbjct: 60 RGAVPLKAPDAYVATLFDQHAEMFDTILVDQLGYDVPLQLREMLLEMDDAFNAERMLDLG 119
Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
++ + + T EV + A+ + D
Sbjct: 120 CGTGLSADALDDMAAHKTGVDISENMIEVAYEKGDYDALFVGEAVHFLESTEEENWDLIV 179
Query: 226 AEEAMARLVE 235
A + + + E
Sbjct: 180 ATDVLPYMGE 189
>gi|17987206|ref|NP_539840.1| 3-demethylubiquinone-9 3-methyltransferase [Brucella melitensis bv.
1 str. 16M]
gi|161619013|ref|YP_001592900.1| methyltransferase type 12 [Brucella canis ATCC 23365]
gi|163843330|ref|YP_001627734.1| methyltransferase type 12 [Brucella suis ATCC 23445]
gi|225627537|ref|ZP_03785574.1| 3-demethylubiquinone-9 3-methyltransferase [Brucella ceti str.
Cudo]
gi|225852566|ref|YP_002732799.1| methyltransferase type 12 [Brucella melitensis ATCC 23457]
gi|254693772|ref|ZP_05155600.1| Methyltransferase type 12 [Brucella abortus bv. 3 str. Tulya]
gi|254704354|ref|ZP_05166182.1| Methyltransferase type 12 [Brucella suis bv. 3 str. 686]
gi|254710144|ref|ZP_05171955.1| Methyltransferase type 12 [Brucella pinnipedialis B2/94]
gi|254714144|ref|ZP_05175955.1| Methyltransferase type 12 [Brucella ceti M644/93/1]
gi|254716798|ref|ZP_05178609.1| Methyltransferase type 12 [Brucella ceti M13/05/1]
gi|256031639|ref|ZP_05445253.1| Methyltransferase type 12 [Brucella pinnipedialis M292/94/1]
gi|256044723|ref|ZP_05447627.1| Methyltransferase type 12 [Brucella melitensis bv. 1 str. Rev.1]
gi|256159783|ref|ZP_05457526.1| Methyltransferase type 12 [Brucella ceti M490/95/1]
gi|256255041|ref|ZP_05460577.1| Methyltransferase type 12 [Brucella ceti B1/94]
gi|256263943|ref|ZP_05466475.1| SAM binding domain-containing protein [Brucella melitensis bv. 2
str. 63/9]
gi|256369488|ref|YP_003106996.1| hypothetical protein BMI_I1068 [Brucella microti CCM 4915]
gi|260168769|ref|ZP_05755580.1| hypothetical protein BruF5_10453 [Brucella sp. F5/99]
gi|260564065|ref|ZP_05834551.1| SAM binding domain-containing protein [Brucella melitensis bv. 1
str. 16M]
gi|260566400|ref|ZP_05836870.1| SAM binding domain-containing protein [Brucella suis bv. 4 str. 40]
gi|261214051|ref|ZP_05928332.1| methyltransferase type 12 [Brucella abortus bv. 3 str. Tulya]
gi|261218597|ref|ZP_05932878.1| methyltransferase type 12 [Brucella ceti M13/05/1]
gi|261222231|ref|ZP_05936512.1| methyltransferase [Brucella ceti B1/94]
gi|261317698|ref|ZP_05956895.1| methyltransferase type 12 [Brucella pinnipedialis B2/94]
gi|261321906|ref|ZP_05961103.1| methyltransferase type 12 [Brucella ceti M644/93/1]
gi|261755026|ref|ZP_05998735.1| methyltransferase type 12 [Brucella suis bv. 3 str. 686]
gi|261758250|ref|ZP_06001959.1| SAM binding domain-containing protein [Brucella sp. F5/99]
gi|265988731|ref|ZP_06101288.1| methyltransferase [Brucella pinnipedialis M292/94/1]
gi|265991145|ref|ZP_06103702.1| methyltransferase type 12 [Brucella melitensis bv. 1 str. Rev.1]
gi|265998196|ref|ZP_06110753.1| methyltransferase type 12 [Brucella ceti M490/95/1]
gi|17982877|gb|AAL52104.1| 3-demethylubiquinone-9 3-methyltransferase [Brucella melitensis bv.
1 str. 16M]
gi|161335824|gb|ABX62129.1| Methyltransferase type 12 [Brucella canis ATCC 23365]
gi|163674053|gb|ABY38164.1| Methyltransferase type 12 [Brucella suis ATCC 23445]
gi|225617542|gb|EEH14587.1| 3-demethylubiquinone-9 3-methyltransferase [Brucella ceti str.
Cudo]
gi|225640931|gb|ACO00845.1| Methyltransferase type 12 [Brucella melitensis ATCC 23457]
gi|255999648|gb|ACU48047.1| hypothetical protein BMI_I1068 [Brucella microti CCM 4915]
gi|260154081|gb|EEW89173.1| SAM binding domain-containing protein [Brucella melitensis bv. 1
str. 16M]
gi|260155918|gb|EEW90998.1| SAM binding domain-containing protein [Brucella suis bv. 4 str. 40]
gi|260915658|gb|EEX82519.1| methyltransferase type 12 [Brucella abortus bv. 3 str. Tulya]
gi|260920815|gb|EEX87468.1| methyltransferase [Brucella ceti B1/94]
gi|260923686|gb|EEX90254.1| methyltransferase type 12 [Brucella ceti M13/05/1]
gi|261294596|gb|EEX98092.1| methyltransferase type 12 [Brucella ceti M644/93/1]
gi|261296921|gb|EEY00418.1| methyltransferase type 12 [Brucella pinnipedialis B2/94]
gi|261738234|gb|EEY26230.1| SAM binding domain-containing protein [Brucella sp. F5/99]
gi|261744779|gb|EEY32705.1| methyltransferase type 12 [Brucella suis bv. 3 str. 686]
gi|262552664|gb|EEZ08654.1| methyltransferase type 12 [Brucella ceti M490/95/1]
gi|263001929|gb|EEZ14504.1| methyltransferase type 12 [Brucella melitensis bv. 1 str. Rev.1]
gi|263094087|gb|EEZ18009.1| SAM binding domain-containing protein [Brucella melitensis bv. 2
str. 63/9]
gi|264660928|gb|EEZ31189.1| methyltransferase [Brucella pinnipedialis M292/94/1]
gi|326409084|gb|ADZ66149.1| methyltransferase type 12 [Brucella melitensis M28]
gi|326538790|gb|ADZ87005.1| Methyltransferase type 12 [Brucella melitensis M5-90]
Length = 276
Score = 37.5 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 18/190 (9%), Positives = 46/190 (24%), Gaps = 3/190 (1%)
Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
D D E Y +A+ K +F A + + + + +
Sbjct: 3 QSDDKPLDQEALAEAYNRALALEKAGDFDAAAKAYEEVLQI---DPDDHGGAAVRLASMG 59
Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
+A + + +G +R++ + + +
Sbjct: 60 RGAVPLKAPDAYVATLFDQHAEMFDTILVDQLGYDVPLQLREMLLEMDDAFNAERMLDLG 119
Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
++ + + T EV + A+ + D
Sbjct: 120 CGTGLSADALDDMAAHKTGVDISENMIEVAYEKGDYDALFVGEAVRFLESTEEENWDLIV 179
Query: 226 AEEAMARLVE 235
A + + + E
Sbjct: 180 ATDVLPYMGE 189
>gi|261378809|ref|ZP_05983382.1| HemY family protein [Neisseria cinerea ATCC 14685]
gi|269144789|gb|EEZ71207.1| HemY family protein [Neisseria cinerea ATCC 14685]
Length = 405
Score = 37.5 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 42/276 (15%), Positives = 80/276 (28%), Gaps = 11/276 (3%)
Query: 4 VLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEK 63
VLG+ + A+ L + + F++G + R K
Sbjct: 31 VLGQTMLRINLHAFVLGSLIAVVVWYFLFKFIIGVFNIPEKMQRFSLARKGRKAALYLNK 90
Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
A L E F KA ++ + +L++ A G + E
Sbjct: 91 AGLAYFEGRFEKAELEASRVLGNKEAGDNRTLALMLGAHAAGQMGNTELRDRYLAEIAKL 150
Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
+ + Y+ + V + A M ++R+V + +G V
Sbjct: 151 PEKQQLSRYLLLAESALNRRDYETVEANLHAAAKMNAGLTRLVRLQLRYAFERGDALEVL 210
Query: 184 VGRNQLAAKEVEIGRYYLKRGEYV--------AAIPRFQLVLANYSDAEHAEEAMARLVE 235
+L+ + + ++ L D+ E + E
Sbjct: 211 AKTEKLSKAGALGESETEQYQNWAYRRLLADADDAVSLKVCLKRIPDSLKNGELSVSVAE 270
Query: 236 AYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
Y L L EA +++ YPQ +E V+
Sbjct: 271 KYERLGLYAEAVRW---VKQHYPQSRRPELLEAFVE 303
>gi|222475990|ref|YP_002564511.1| hypothetical protein Hlac_3085 [Halorubrum lacusprofundi ATCC
49239]
gi|222454361|gb|ACM58625.1| conserved hypothetical protein [Halorubrum lacusprofundi ATCC
49239]
Length = 362
Score = 37.5 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 14/203 (6%), Positives = 41/203 (20%), Gaps = 7/203 (3%)
Query: 72 NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
+ ++A D A + + A+
Sbjct: 101 DTTEASFRDRAAEVDSAMALADQWEDDHDVDASGYDQDFIWMAAEVFWSRWASDLPYRER 160
Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
+ + + + + + + + +
Sbjct: 161 IYDLVQEGRELREQGNDAEACQQWLTAWETIIAVTPEDITTIEAADDHLPNVLSLEPFLR 220
Query: 192 KEVE--IGRYYLKRGEYVAAIPRFQLVLANYSDAE--HAEEAMARLVEAYVALALMDEAR 247
+ + + V + DA + + + L +DE+R
Sbjct: 221 SVDNDLAALAADDPTYHERRLEFCRGVCTQFPDAPDELLLDFRHFIADLLTELGRLDESR 280
Query: 248 EVVSLIQERYPQGYWARYVETLV 270
+ YP+ W +
Sbjct: 281 NEFETLIRDYPEDSW---AYKKL 300
>gi|159028723|emb|CAO88195.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 565
Score = 37.5 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 27/212 (12%), Positives = 50/212 (23%), Gaps = 12/212 (5%)
Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
+ L + A + + A + Q + QA G
Sbjct: 44 QGDRLLAAGDKESALSAYRTVLSFDENSVQAHIKIAQVLQSQKRYSEALQAYDRGFIVND 103
Query: 123 QYPESKNV--------DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
+ P + D S A + T + + +
Sbjct: 104 KPPMEPSQSNYLVALGDIFAQEEKWSEAIDAYRKAMIIKPTFKAQFQLGKALYSLQRWDE 163
Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234
A +G+ Y ++ + A +Q L + E +L
Sbjct: 164 AAKALQAAVFLDPTQGKAYFYLGKAYSEQQLWPEASYAYQQALELIPN---QGEIYKKLG 220
Query: 235 EAYVALALMDEARE-VVSLIQERYPQGYWARY 265
EA V +EA + + G Y
Sbjct: 221 EALVKQGKWEEAEQIYRQALIYAPKDGDIYNY 252
>gi|159468488|ref|XP_001692406.1| flagellar associated protein [Chlamydomonas reinhardtii]
gi|158278119|gb|EDP03884.1| flagellar associated protein [Chlamydomonas reinhardtii]
Length = 647
Score = 37.5 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 18/96 (18%), Positives = 34/96 (35%), Gaps = 5/96 (5%)
Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
F+ R + + +K ++ AI Q L N ++ A++ L Y
Sbjct: 1 MAFFQQPARPIAEGQYTQTIYTLIKEQKFAEAIQHLQYQLQNVPESRA---ALSLLGYCY 57
Query: 238 VALALMDEAREVVSLIQERYPQGYWAR--YVETLVK 271
D A ++ + YP + Y ++L K
Sbjct: 58 YYTGQYDMASQMYEQLVTLYPSNEDYKLYYAQSLYK 93
>gi|160898837|ref|YP_001564419.1| tol-pal system protein YbgF [Delftia acidovorans SPH-1]
gi|160364421|gb|ABX36034.1| tol-pal system protein YbgF [Delftia acidovorans SPH-1]
Length = 260
Score = 37.5 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 21/114 (18%), Positives = 37/114 (32%), Gaps = 14/114 (12%)
Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
S + ++ S YV ARF++ G Y AI F+ +
Sbjct: 157 EAGTAFSSFLNQWPKSGYVPSARFWL--------------GNAQYANRNYKDAITNFRAL 202
Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
LA A EA + + + AR+ + + + YP + +
Sbjct: 203 LAAAPMHGRAPEAALSIANCQIEMKDTKGARKTLEDLIKAYPNAEATAAAKNRL 256
>gi|118366677|ref|XP_001016554.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89298321|gb|EAR96309.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 564
Score = 37.5 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 23/212 (10%), Positives = 54/212 (25%), Gaps = 2/212 (0%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
+ FLK++ + A +F + + A L S + +
Sbjct: 80 KLGYSFLKKKMYDDAITFFQKAIQLNDKDSWAFGKLGYSFLKKKMYDDAFTFFQKAAQLD 139
Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
Q + + Y I + R+ + A +
Sbjct: 140 PQDSSAFANLGYLFYKKEMYDDAITFFQKAVQLDPKCSWAFGRMGYVFLKREMNDDAISF 199
Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
G+ + + + +A+ +L ++
Sbjct: 200 FQKSVQLDPKDSWAFGQLGYLFLKKEMYDYAIKFLKKAVQLNPKDSQALGKLGYTFLKKQ 259
Query: 242 LMDEAREVVSLIQERYPQGYWA--RYVETLVK 271
+ D A + + YP+ WA + + +K
Sbjct: 260 MYDYAIKFLKKTVLLYPKDSWALGKLGYSFLK 291
>gi|317496534|ref|ZP_07954883.1| hypothetical protein HMPREF0432_01487 [Gemella moribillum M424]
gi|316913337|gb|EFV34834.1| hypothetical protein HMPREF0432_01487 [Gemella moribillum M424]
Length = 202
Score = 37.5 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 9/118 (7%), Positives = 32/118 (27%), Gaps = 4/118 (3%)
Query: 4 VLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSR----DVYLDSVTDVRYQRE 59
+ + + + + L F ++V L G + + + +
Sbjct: 12 ISKKGLYNIIEGDFYMKTKILLSFLLVSVVILNGCSSKKEETKTNSSTTEQTKQETPKEK 71
Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
+Y ++ + + + F+ +++ + + G L
Sbjct: 72 IYGLNDEWVVDGQWKLKITSVTPTAERNQFSEDKPAQVVVINYTYENLGYTSDVQDLF 129
>gi|208435271|ref|YP_002266937.1| competence lipoprotein [Helicobacter pylori G27]
gi|208433200|gb|ACI28071.1| competence lipoprotein [Helicobacter pylori G27]
Length = 220
Score = 37.5 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 33/204 (16%), Positives = 68/204 (33%), Gaps = 6/204 (2%)
Query: 15 WAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFS 74
+ +K L I +I V G + + + Y+ + + N
Sbjct: 1 MRLKHFKTFLFITMAIIVIG-TGCANKKKKKDEYNKPAIFW-----YQGILREILFANLE 54
Query: 75 KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
A Y++ + + + +++L +Y A+ +EYI ++ NVDY+
Sbjct: 55 TADNYYSSLQSEHINSPLVPEAMLALGQAHMKKREYVLASFYFDEYIKRFGTKDNVDYLT 114
Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
+L S+ ++ DQ + + +E+Y NS Y +
Sbjct: 115 FLKLQSHYYAFKNHSKDQEFISNSIVSLGEFIEKYPNSRYRPYVEYMQIKFILGQNELNR 174
Query: 195 EIGRYYLKRGEYVAAIPRFQLVLA 218
I Y KR + + +
Sbjct: 175 AIANVYKKRHKPEGVKRYLERIDE 198
>gi|152993345|ref|YP_001359066.1| hypothetical protein SUN_1762 [Sulfurovum sp. NBC37-1]
gi|151425206|dbj|BAF72709.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1]
Length = 282
Score = 37.5 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 17/106 (16%), Positives = 31/106 (29%)
Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
+ K + AA +G +Y AI F+ Y A +
Sbjct: 175 LFNKKRYNEAKKRFTITDSKGYKPAASNYYLGEIAYYTKKYDDAIFYFKKSAGLYDQASY 234
Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+ + + ++AR I E Y A+ + +K
Sbjct: 235 IDTLLLHTGISLEKTGEKEQARAFYKNIIENYSGKKSAKIAKDRLK 280
>gi|315187027|gb|EFU20784.1| Tetratricopeptide TPR_1 repeat-containing protein [Spirochaeta
thermophila DSM 6578]
Length = 365
Score = 37.5 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 20/220 (9%), Positives = 49/220 (22%), Gaps = 7/220 (3%)
Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
G ++S D + L +++ A Y+ R
Sbjct: 128 TGNFKRSKELYLKVLELDEGNPYALIGLGHLHYDFKDYRTAISYWEAILERDRDRVDIRV 187
Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
+ + + + + + +++
Sbjct: 188 LTAIGNCHRKLKQYERGIPYFLKALEKDPHNFYALFGLADCYRGVGDHRRSLQYWERILE 247
Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
K ++++ T Y A L A ++
Sbjct: 248 KD---PHNKVILTRTGDAYRHLGDLARAEEYYHQALNIEFDSYAILGLAMVHKARKEYRE 304
Query: 216 VLANYSD----AEHAEEAMARLVEAYVALALMDEAREVVS 251
+ + + L + Y+ L +EAR V+
Sbjct: 305 AAESLNTILRLDPENPKIYIELADCYLHLNQKEEARSVLK 344
>gi|260565804|ref|ZP_05836287.1| TPR repeat-containing protein [Brucella melitensis bv. 1 str. 16M]
gi|260151177|gb|EEW86272.1| TPR repeat-containing protein [Brucella melitensis bv. 1 str. 16M]
Length = 151
Score = 37.5 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 17/68 (25%), Positives = 23/68 (33%)
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+ YL G+Y AA F+ + Y EA L E+ EA +
Sbjct: 31 YQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYPEAATLFIDT 90
Query: 254 QERYPQGY 261
Q YP
Sbjct: 91 QRDYPDSK 98
Score = 36.3 bits (81), Expect = 4.4, Method: Composition-based stats.
Identities = 19/81 (23%), Positives = 29/81 (35%)
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
A +G +G Y A F +Y D++ A E M +L A
Sbjct: 53 HVKRYPADPMTAEARFWLGESLYGQGRYPEAATLFIDTQRDYPDSKRAPENMFKLGMALE 112
Query: 239 ALALMDEAREVVSLIQERYPQ 259
+ D A + I +RYP+
Sbjct: 113 KMDNHDVACATFAQIPQRYPK 133
Score = 35.2 bits (78), Expect = 9.6, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 39/94 (41%)
Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
+Y+ A +L ++ A F + + +P + ++ Y G+Y +A
Sbjct: 24 DDNPNSLYQAAYQYLMSGDYKAAEAGFREHVKRYPADPMTAEARFWLGESLYGQGRYPEA 83
Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147
A+L + YP+SK + +GM+ +M
Sbjct: 84 ATLFIDTQRDYPDSKRAPENMFKLGMALEKMDNH 117
>gi|242310653|ref|ZP_04809808.1| flagellar functional protein [Helicobacter pullorum MIT 98-5489]
gi|239523051|gb|EEQ62917.1| flagellar functional protein [Helicobacter pullorum MIT 98-5489]
Length = 788
Score = 37.5 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 15/137 (10%), Positives = 40/137 (29%), Gaps = 11/137 (8%)
Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
+ + + + ++++ + L + +++ Y + + + F
Sbjct: 158 DFRMRPMDNEVGQDKDYFLNIQSLLEKKSYQEALNNIDEMLQNYPETIFKRDILFMKLKA 217
Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
L +E L + L Y H E + + E Y + +E
Sbjct: 218 LQNLQNQEDYEEIMALG-----------KAWLNAYPADIHVPEVLLLMAENYAKMNFFEE 266
Query: 246 AREVVSLIQERYPQGYW 262
A + + Y +
Sbjct: 267 ASYYYDRLFKEYKDDKY 283
>gi|118581067|ref|YP_902317.1| hypothetical protein Ppro_2656 [Pelobacter propionicus DSM 2379]
gi|118503777|gb|ABL00260.1| Tetratricopeptide TPR_2 repeat protein [Pelobacter propionicus DSM
2379]
Length = 568
Score = 37.5 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 21/238 (8%), Positives = 63/238 (26%), Gaps = 15/238 (6%)
Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLK-------EQNFSK 75
+ L + + + + Y +A+ E ++
Sbjct: 2 KYVLSMLFCATMLSSCATFG--EYAPSTPSLSSPAYDAYSRALYLYSRSRLASLEGEYAL 59
Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
A + P + ++ + + + + + + E + V
Sbjct: 60 ALNCLREAIEQDPSSAFLYSAMAENKLKIGQVQEALENINRAIKQDPSFREPYVMAGVLM 119
Query: 136 LVGMSYAQMIRDVP---YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
+ + + + + +++ + R + +
Sbjct: 120 ASAGKDTEAVGYLRTAIQLDPSKEDAYLHLAVSLTRMFEYEEAVTTLKSLVKQNPESVLG 179
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
+GR Y + Y A+ F+ + + +A + +Y AL +A E+
Sbjct: 180 YYYLGRSYSQMKLYRDAVGYFKKSIELRPEFS---QAAIDMAASYEALGDYTKAIEIY 234
>gi|113475342|ref|YP_721403.1| hypothetical protein Tery_1657 [Trichodesmium erythraeum IMS101]
gi|110166390|gb|ABG50930.1| TPR repeat [Trichodesmium erythraeum IMS101]
Length = 594
Score = 37.5 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 26/213 (12%), Positives = 58/213 (27%), Gaps = 8/213 (3%)
Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKSLLMSAFVQYSAGK 109
+ Y++ FL+ +A + +++ R ++L A +
Sbjct: 175 NPNLPLAYYDQGRCFLQLGKKKQAQDCWHEGLKIIPKTSDDYNTRGAILSQLEEHSKALE 234
Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
Q A + + + + + + E+
Sbjct: 235 EFQEALRLNNNNIGAYVHRAMAHSALGNHQAVMDNFDKALSLNSNDADIYGWRGIHFEQT 294
Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
+ E G+ Y G AI F L + +A +A
Sbjct: 295 GELKKAIEEFDKALQINYKYTVVYAERGKCYSWLGNQQEAIKDFNRALEIAPNNSYAYDA 354
Query: 230 MARLVEAYVALALMDEA-REVVSLIQERYPQGY 261
+ AY+ L ++EA ++ ++ P
Sbjct: 355 L---GTAYLYLNDIEEAEQKFKKALKLN-PNNP 383
Score = 35.2 bits (78), Expect = 9.2, Method: Composition-based stats.
Identities = 32/218 (14%), Positives = 62/218 (28%), Gaps = 8/218 (3%)
Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
+ Y ++A + + N+ +A +++ R P +A + Q
Sbjct: 141 EPAYANAYVQRADVDFRLNNYQQAISIYDRGLRLNPNLPLAYYDQGRCFLQLGKKKQAQD 200
Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL---MLQYMSRIVERY 169
G + I + + N +++ + + R + +
Sbjct: 201 CWHEGLKIIPKTSDDYNTRGAILSQLEEHSKALEEFQEALRLNNNNIGAYVHRAMAHSAL 260
Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA-NYSDAEHAEE 228
N V + A G ++ + GE AI F L NY E
Sbjct: 261 GNHQAVMDNFDKALSLNSNDADIYGWRGIHFEQTGELKKAIEEFDKALQINYKYTVVYAE 320
Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
+ Y L EA + + E P +A
Sbjct: 321 ----RGKCYSWLGNQQEAIKDFNRALEIAPNNSYAYDA 354
>gi|332024785|gb|EGI64973.1| RNA polymerase-associated protein CTR9-like protein [Acromyrmex
echinatior]
Length = 1225
Score = 37.5 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 29/199 (14%), Positives = 64/199 (32%), Gaps = 18/199 (9%)
Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
+ +A ++F R A L + G Q+ + T ++
Sbjct: 542 DKGQIYEASDWFKDALRINNEHPDAWSLLGNLHLAKMEWGPGQKKFERILKNPTTSTDAY 601
Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY-------------- 174
++ + + + Q +D ++R L +++ + +
Sbjct: 602 SLIALGNIWLQTLHQSGKDKEREKRHQDRALAMYKQVLRNDPKNIWAANGIGAVLAHKGC 661
Query: 175 VKGARFYVTVGRNQLAAKEVEI---GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231
V AR R A Y+++ ++V+AI ++ L + H E +
Sbjct: 662 VNEARDIFAQVREATAEFCDVWLNIAHIYVEQKQFVSAIQMYENCLRKFYKYHHV-EVLQ 720
Query: 232 RLVEAYVALALMDEAREVV 250
L AY + EA+ +
Sbjct: 721 YLGRAYFKAGKLKEAKLTL 739
>gi|293610294|ref|ZP_06692595.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292827526|gb|EFF85890.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 266
Score = 37.5 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 31/254 (12%), Positives = 74/254 (29%), Gaps = 14/254 (5%)
Query: 21 KFALTIFFSIAVCFL-VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
K + IAV FL G + ++ + VR + A ++ + A
Sbjct: 5 KLKTVLCMGIAVAFLVSGCQTTHTQKKDPEKAVKVRT-----QLAAEHIRSGDLDSAKRA 59
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
+Q A + + + S ++A + I+ P++ Y
Sbjct: 60 LDQALSVDSRDATANMMMGILLQQEGSKPNLEKAEHYFKRAISSEPDNAQAHNNYGTYLY 119
Query: 140 SYAQMIRDVPYD--------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
+ V L+ + RI + + + +
Sbjct: 120 QMERYNDAVEQFRIAGATLGYDQRYQALENLGRIYLKLGDVANAEKTFKQALLANRDSYI 179
Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
+E+ + + + AA ++ + A+ V A A + +V+
Sbjct: 180 SMLELAEIFYLQQQIPAATQMYEQYVRTVGQKNQGARALWIGVRVARANADKMGMQVLVN 239
Query: 252 LIQERYPQGYWARY 265
++ +P+ +
Sbjct: 240 QLRALFPESPEYQR 253
>gi|225175040|ref|ZP_03729037.1| hypothetical protein DealDRAFT_0892 [Dethiobacter alkaliphilus
AHT 1]
gi|225169680|gb|EEG78477.1| hypothetical protein DealDRAFT_0892 [Dethiobacter alkaliphilus
AHT 1]
Length = 129
Score = 37.5 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 27/68 (39%), Gaps = 13/68 (19%)
Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKA---VLFLKEQNFS 74
L +FA+ I V L + DV E+YEKA V L + ++S
Sbjct: 1 MLKRFAVFCLLVIFVFVLASCGQSGESDVN----------EELYEKASEFVSQLVDGDYS 50
Query: 75 KAYEYFNQ 82
A+ F+
Sbjct: 51 SAFASFDD 58
>gi|237830325|ref|XP_002364460.1| TPR domain-containing protein [Toxoplasma gondii ME49]
gi|211962124|gb|EEA97319.1| TPR domain-containing protein [Toxoplasma gondii ME49]
gi|221507329|gb|EEE32933.1| TPR domain-containing protein, putative [Toxoplasma gondii VEG]
Length = 462
Score = 37.5 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 9/46 (19%), Positives = 21/46 (45%)
Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
E+A+ R+ +A+ L +A + + + E P A + ++
Sbjct: 113 NEKALLRMAKAHSELQEYSKAEQTLRRLLELRPDNQEASRLYRQIR 158
>gi|150399217|ref|YP_001322984.1| hypothetical protein Mevan_0465 [Methanococcus vannielii SB]
gi|150011920|gb|ABR54372.1| Tetratricopeptide TPR_2 repeat protein [Methanococcus vannielii SB]
Length = 124
Score = 37.5 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 10/114 (8%), Positives = 19/114 (16%), Gaps = 13/114 (11%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K + I G Y V +++ A
Sbjct: 1 MEKKRIIITLISLFIVFAGCLGNKD-------------PESYYINGVEKYNSGDYNGAIF 47
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132
F+ + P S + + I
Sbjct: 48 AFDSAIQLNPEETKYWLMKGKSLYGLQRYEESADCYGYILTVIKDEYNKDVWAE 101
>gi|256027670|ref|ZP_05441504.1| high-affinity iron permease [Fusobacterium sp. D11]
Length = 438
Score = 37.5 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 11/76 (14%), Positives = 25/76 (32%), Gaps = 5/76 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV-----YEKAVLFLKEQNF 73
+ K+ ++F I L + D ++ A +++E N+
Sbjct: 1 MKKYFKSLFAFIFAFGLFISFSSVDVEAAQKKKYDTWQDVAKDMNVEFQAAKKYIEEGNY 60
Query: 74 SKAYEYFNQCSRDFPF 89
+AY N+ +
Sbjct: 61 DEAYNAMNKAYFGYYE 76
>gi|229176772|ref|ZP_04304174.1| hypothetical protein bcere0005_1570 [Bacillus cereus 172560W]
gi|228606664|gb|EEK64083.1| hypothetical protein bcere0005_1570 [Bacillus cereus 172560W]
Length = 254
Score = 37.5 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 22/59 (37%), Gaps = 5/59 (8%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV-----YEKAVLFLKEQN 72
+ K L +AV VG + ++ V+ ++E+ + KA K +
Sbjct: 1 MKKLILISSLVLAVGLGVGCSNEKTKKTDEPKKEAVQKEKELTAKDVFNKANEAFKNEE 59
>gi|298491174|ref|YP_003721351.1| Lytic transglycosylase catalytic ['Nostoc azollae' 0708]
gi|298233092|gb|ADI64228.1| Lytic transglycosylase catalytic ['Nostoc azollae' 0708]
Length = 729
Score = 37.5 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 15/112 (13%), Positives = 34/112 (30%)
Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
+ ++ ++ + A + K +YV A Q +
Sbjct: 335 KAQLLETLKDNQSANTAWKLLLGKYSNSEEAAEYRWKTALNRSKSRDYVGAWQWAQPIAI 394
Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
+ A A + + L EA + ++PQ Y+A +++
Sbjct: 395 ENPKSILAPRASFWVGKWATMLGKQQEAHNAYKYVLSQFPQSYYAWRSASIL 446
>gi|159027098|emb|CAO89283.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 363
Score = 37.5 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 28/243 (11%), Positives = 64/243 (26%), Gaps = 35/243 (14%)
Query: 19 LYKFALTIFFS-IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
+ +F I + + + V+ E+ +A +K N+ +A
Sbjct: 1 MKQFTRLILLVGLLAGGCFSPSIAIADNPAGAIVSKDSQVNELLRQARQLVKNGNYGEAI 60
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
+ Q + + Q QA P+
Sbjct: 61 AIYEQAAALDGNNARIFSGIGFLQTRQGDYNAAAQAYQKALSLDPSNPDF---------- 110
Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
+ + + A +Y + + +G
Sbjct: 111 ---------------------FHALGYSLANIGDYNNAATAYYYAIQIEPKNVQHYLGLG 149
Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
L++ Y A +Q +LA + ++A + +A + EA + + +R+
Sbjct: 150 VVLLRQKNYAKAGEVYQWILALDPN---NQQAHEIMGKALIEQNKSSEAFDFLQKSLQRF 206
Query: 258 PQG 260
P
Sbjct: 207 PNN 209
>gi|328701581|ref|XP_003241648.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog isoform 2
[Acyrthosiphon pisum]
Length = 975
Score = 37.5 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 30/199 (15%), Positives = 71/199 (35%), Gaps = 18/199 (9%)
Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
+A ++F + R A L + G Q+ + + +S
Sbjct: 340 DRNQIYEASDWFKEALRIDNEHPDAWSLLGNLHLAKMEWGPGQKKFERVLKNPSTLNDSY 399
Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS--------------PY 174
++ + + + Q R+ ++R L LQ+ +++++ + Y
Sbjct: 400 SLIALGNVWLQTLHQPTRNKEQEKRHQDLALQFFTKVLKNDPKNIWAANGIGCVMAHKQY 459
Query: 175 VKGARFYVTVGRNQLAAKEVEI---GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231
+ AR R A Y+++ +Y++AI ++ + + ++ E +
Sbjct: 460 INEARDIFAQVREATADFCDVWLNIAHIYIEQKQYISAIQMYENCIKKFFKHDNV-EILQ 518
Query: 232 RLVEAYVALALMDEAREVV 250
L AY + EA++V
Sbjct: 519 YLGRAYFKAGKLKEAKKVF 537
>gi|307718491|ref|YP_003874023.1| TPR domain-containing protein [Spirochaeta thermophila DSM 6192]
gi|306532216|gb|ADN01750.1| TPR domain protein [Spirochaeta thermophila DSM 6192]
Length = 382
Score = 37.5 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 20/220 (9%), Positives = 49/220 (22%), Gaps = 7/220 (3%)
Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
G ++S D + L +++ A Y+ R
Sbjct: 145 TGNFKRSKELYLKVLELDEGNPYALIGLGHLHYDFKDYRTAISYWEAILERDRDRVDIRV 204
Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
+ + + + + + +++
Sbjct: 205 LTAIGNCHRKLKQYERGIPYFLKALEKDPHNFYALFGLADCYRGVGDHRRSLQYWERILE 264
Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
K ++++ T Y A L A ++
Sbjct: 265 KD---PHNKVILTRTGDAYRHLGDLARAEEYYHQALNIEFDSYAILGLAMVHKARKEYRE 321
Query: 216 VLANYSD----AEHAEEAMARLVEAYVALALMDEAREVVS 251
+ + + L + Y+ L +EAR V+
Sbjct: 322 AAESLNTILRLDPENPKIYIELADCYLHLNQKEEARSVLK 361
>gi|281349619|gb|EFB25203.1| hypothetical protein PANDA_002014 [Ailuropoda melanoleuca]
Length = 434
Score = 37.5 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 23/191 (12%), Positives = 55/191 (28%), Gaps = 5/191 (2%)
Query: 74 SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
KA + + + + + + + + + ES ++
Sbjct: 203 EKAVQRMEKGEHSVVYLKPSYAFGNVGKEKFQIPPNAELKYEIHLKSFEKAKESWEMNSE 262
Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
L + + V + + K + +IV + F + A +
Sbjct: 263 EKLEQSTIVKERGTVYFKEGKYKQAVLQYKKIVSWLEY-----ESSFSNEDAQKAQALRL 317
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+ + A + + E+ + R EA++A+ D AR +
Sbjct: 318 ASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLFRRGEAHLAVNDFDLARADFQKV 377
Query: 254 QERYPQGYWAR 264
+ YP A+
Sbjct: 378 LQLYPSNKAAK 388
>gi|186686707|ref|YP_001869901.1| tetratricopeptide TPR_4 [Nostoc punctiforme PCC 73102]
gi|186469592|gb|ACC85390.1| Tetratricopeptide TPR_4 [Nostoc punctiforme PCC 73102]
Length = 874
Score = 37.5 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 20/238 (8%), Positives = 59/238 (24%), Gaps = 11/238 (4%)
Query: 25 TIFFSIAVCFLVGWERQSS--------RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76
I F++A+ ++ + + +++ E+ + F++A
Sbjct: 18 VILFTLAIFLIIIPSTFAKPIQTNLPDEFHIQTNKPPATTSQQLLEQGEALYQAGRFTEA 77
Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
Q R + + T + L
Sbjct: 78 VTVLQQAVRISQAESNNLAQAAALTNLSLVYQQIGSWKKADATIDTSLNLLGWDEKNQTL 137
Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196
+ + ++ + LQ + + + + ++
Sbjct: 138 NVNNPKSQLWEILAQTLNIQGELQLAQGQTDASVKTSQQAEQIWKKLGDNAGVTRSRIDQ 197
Query: 197 GRYYLKRGEYVAAIPRFQLVLAN---YSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
+ G Y + Q V D+ A+ L L ++ +++++
Sbjct: 198 AQALRVSGFYRRSRDILQEVSEQLKAQPDSLLKVTALRSLGNVLQQLGEIESSQKILQ 255
>gi|228905964|ref|ZP_04069859.1| hypothetical protein bthur0013_1540 [Bacillus thuringiensis IBL
200]
gi|228937472|ref|ZP_04100116.1| hypothetical protein bthur0008_1560 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228970360|ref|ZP_04131017.1| hypothetical protein bthur0003_1560 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228976930|ref|ZP_04137340.1| hypothetical protein bthur0002_1560 [Bacillus thuringiensis
Bt407]
gi|229077535|ref|ZP_04210179.1| hypothetical protein bcere0023_2450 [Bacillus cereus Rock4-2]
gi|228705735|gb|EEL58077.1| hypothetical protein bcere0023_2450 [Bacillus cereus Rock4-2]
gi|228782782|gb|EEM30950.1| hypothetical protein bthur0002_1560 [Bacillus thuringiensis
Bt407]
gi|228789352|gb|EEM37274.1| hypothetical protein bthur0003_1560 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228822191|gb|EEM68175.1| hypothetical protein bthur0008_1560 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228853651|gb|EEM98413.1| hypothetical protein bthur0013_1540 [Bacillus thuringiensis IBL
200]
gi|326937963|gb|AEA13859.1| hypothetical protein CT43_CH0166 [Bacillus thuringiensis serovar
chinensis CT-43]
Length = 254
Score = 37.5 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 22/59 (37%), Gaps = 5/59 (8%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV-----YEKAVLFLKEQN 72
+ K L +AV VG + ++ V+ ++E+ + KA K +
Sbjct: 1 MKKLILISSLVLAVGLGVGCSNEKTKKTDEPKKEAVQKEKELTAKDVFNKANEAFKNEE 59
>gi|257062034|ref|YP_003139922.1| hypothetical protein Cyan8802_4301 [Cyanothece sp. PCC 8802]
gi|256592200|gb|ACV03087.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 8802]
Length = 363
Score = 37.5 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 25/214 (11%), Positives = 62/214 (28%), Gaps = 9/214 (4%)
Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPF-AGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
V+ L++ ++ A E + + P + + Q + + +
Sbjct: 151 GVVLLRQNDYQGAAEAYKRVIALDPNNSEAFAIMGSSLIQQKELDKAIQYLNNAVKRFPN 210
Query: 123 QYPESKNVDYVYYLVGMSY--AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
+ + + ++ + + RI+E+
Sbjct: 211 DLELRLLLATAFLEQDNNELAFNQLKSAERISPGNPKVQLKIGRILEQQNKLDDALKTYQ 270
Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
+T +GR L +Y+ A+ ++ + + + E L AY
Sbjct: 271 RITYLSPSSTEARAGVGRIQLATKDYLGAVITYRELASMLPETP---EPYYYLGLAYKER 327
Query: 241 ALMDEAREVVSLIQERYP---QGYWARYVETLVK 271
EA + + ++ Y V+ L+K
Sbjct: 328 GRKKEATKALEQARQLYQKQDNNKGIEEVDKLLK 361
>gi|297261551|ref|XP_001098079.2| PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP4 isoform 2
[Macaca mulatta]
Length = 459
Score = 37.5 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 31/233 (13%), Positives = 76/233 (32%), Gaps = 14/233 (6%)
Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQN---------FSKAYEYFNQCSRDFPFAG 91
+ + ++ + Y+ +++++ L + +A + + +
Sbjct: 163 KPNEGAIVEVALEGYYKDQLFDQRELRFEIGEGENLDLPYGLERAIQRMEKGEHSIVYLK 222
Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151
+ + + L + + ES ++ L + + V +
Sbjct: 223 PSYAFGSVGKEKFQIPPNAELKYELHLKSFEKAKESWEMNSEEKLEQSTIVKERGTVYFK 282
Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
+ K L +IV + + +LA+ + +LK + AAI
Sbjct: 283 EGKYKQALLQYKKIV-SWLEYESSFSSEEAQKAQALRLASHL-NLAMCHLKLQAFSAAIE 340
Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
L S+ E+ + R EA++A+ + AR + + YP A+
Sbjct: 341 SCNKALELDSN---NEKGLFRRGEAHLAVNDFELARADFQKVLQLYPNNKAAK 390
>gi|288929260|ref|ZP_06423105.1| lipoprotein RagB [Prevotella sp. oral taxon 317 str. F0108]
gi|288329362|gb|EFC67948.1| lipoprotein RagB [Prevotella sp. oral taxon 317 str. F0108]
Length = 521
Score = 37.5 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 15/202 (7%), Positives = 53/202 (26%), Gaps = 3/202 (1%)
Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
+ Y++A + + + Y + + + M + + + +Q +
Sbjct: 219 MDKAYQEAKQLVDKNTYPLIAPYTAKLNSEGKVTPTEDAFAQMWFYDKGTEQIWQPYVAK 278
Query: 117 GEEYITQY--PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
E T + ++ +++ T+ ++ + + +
Sbjct: 279 ENEVPTVTSLYGADLSTTTHWDEAKQPSKVGDYNKPPYVPTREVINDLFANGNDHRAHIH 338
Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA-IPRFQLVLANYSDAEHAEEAMARL 233
+ V V + + + E +
Sbjct: 339 FEFVNTTVNDVNVSTQLYVVSKFKGNPNYATLTSTHWGGYVPNGNQAPKPFRIAEQYLIV 398
Query: 234 VEAYVALALMDEAREVVSLIQE 255
EA L +A+ ++ +++
Sbjct: 399 AEAAYKLGNTADAQSYLNTLRQ 420
>gi|326316640|ref|YP_004234312.1| tol-pal system protein YbgF [Acidovorax avenae subsp. avenae ATCC
19860]
gi|323373476|gb|ADX45745.1| tol-pal system protein YbgF [Acidovorax avenae subsp. avenae ATCC
19860]
Length = 268
Score = 37.5 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 24/114 (21%), Positives = 40/114 (35%), Gaps = 14/114 (12%)
Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
+ + +Y S Y+ ARF++ G +Y AI F+ +
Sbjct: 165 DAVSAFGNFLRQYPRSGYMPSARFWL--------------GNAQYATRDYKEAINNFKAL 210
Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
LA D A EA + + L AR+ + + YPQ A + +
Sbjct: 211 LAASPDHARAPEAALSIANCQIELKDTRAARKTLEDLLRAYPQSEAAAAAKERL 264
>gi|229593286|ref|YP_002875405.1| putative lipoprotein [Pseudomonas fluorescens SBW25]
gi|229365152|emb|CAY53400.1| putative lipoprotein [Pseudomonas fluorescens SBW25]
Length = 464
Score = 37.5 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 36/256 (14%), Positives = 67/256 (26%), Gaps = 14/256 (5%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQN------ 72
+ AL AV L G S D L + V + A+ L++ N
Sbjct: 1 MAFRALPSLALAAVTLLSGCSMFRSYDTELQATNQQLATGNV-DAALTLLEKNNTGDDKD 59
Query: 73 --FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
+ + D + A +S + + + K+ A L + +
Sbjct: 60 LLYFFEKGELLRAKGDLTGSQTAWRSADLQVYKWEESVKFDSARYLAQFGSFLANDKVRR 119
Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
Y + + I + + + R + R A
Sbjct: 120 YEGYDYEKVMLTTQMALNLLALNDFDGART---EIKKTHEREAVIADLRDKEYLKREDEA 176
Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
+E + RG V + ++V ++ + + Y AL D A
Sbjct: 177 QREGVTTQMKDLRGYPVETLDAPEVVGLK--NSYQSAFSHYLAGFVYEALGEKDLAAPGY 234
Query: 251 SLIQERYPQGYWARYV 266
E P
Sbjct: 235 RKAVELRPNTPLLEKA 250
>gi|216264005|ref|ZP_03435999.1| tetratricopeptide repeat domain protein [Borrelia afzelii ACA-1]
gi|215980049|gb|EEC20871.1| tetratricopeptide repeat domain protein [Borrelia afzelii ACA-1]
Length = 1013
Score = 37.5 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 23/219 (10%), Positives = 62/219 (28%)
Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
+ VY + + Y+ ++ K + + + E F+Q R P A + ++
Sbjct: 654 KAESVYDKITKLTNAKEDYYKLGIIRFKLKKYEHSIEAFDQTIRLDPKHKKAHNNKGIAL 713
Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
+ + ++ + Y + + Q K +
Sbjct: 714 ILLNKNKQAIESFEKAIQIDKNYDTAYYQKGIAEEKTGDMQQAFVSFKNAYDLNKKLNYA 773
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
+ + + K + N E+ I + + E +++ +
Sbjct: 774 LKAGIVSNNLGNFKKSEEYLGFFNDNVKKPNEIAIYNLSIAKFENNKLEESLEIINKAIN 833
Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
E + + A + +L+ E+ P+
Sbjct: 834 LNPEKSEYLYLKASINLKNGNYQNAIPLYNLVIEKNPEN 872
>gi|302342946|ref|YP_003807475.1| hypothetical protein Deba_1513 [Desulfarculus baarsii DSM 2075]
gi|301639559|gb|ADK84881.1| hypothetical protein Deba_1513 [Desulfarculus baarsii DSM 2075]
Length = 163
Score = 37.5 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 10/87 (11%), Positives = 25/87 (28%), Gaps = 4/87 (4%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQRE---VYEKAVLFLKEQNFSK 75
+ + + L G ++ E +YE L L + + +
Sbjct: 4 MLRLS-IASLFCLAALLAGCADGTTPITTRAIEERYLGMGEAVRMYEYGELLLADGRYKE 62
Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAF 102
AY F ++ + + + +
Sbjct: 63 AYTAFLSAEQNAYTSDLREAARKRRMW 89
>gi|123975181|ref|XP_001330228.1| TPR Domain containing protein [Trichomonas vaginalis G3]
gi|121896222|gb|EAY01380.1| TPR Domain containing protein [Trichomonas vaginalis G3]
Length = 705
Score = 37.5 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 18/201 (8%), Positives = 55/201 (27%), Gaps = 6/201 (2%)
Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
+Y V+ + +A + F + +R P A + +
Sbjct: 415 VEALYNLGVVSKMMGQYEEALQVFEKLNRIIPKAPEVAFEISDCYEKAGFNTNAIEWLHR 474
Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT---KLMLQYMSRIVERYTNSP 173
+ P + + AQ + + ++Q++ + +
Sbjct: 475 LINIQPKDPAIWRRLGAIWDRDQNEAQAFQCYTESYKYCPSDIDVIQWLGSYFRKKQSYD 534
Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
+ + + + + + A+ ++ V+ + + E + +L
Sbjct: 535 QALKFFERASELAPKQPRYLMMVASCHRNMDQKQEALTTYEKVMQLDPNNKQCLEHLIKL 594
Query: 234 VEAYVALALMDEAREVVSLIQ 254
+ L +A L +
Sbjct: 595 T---TEMGLSAKADYYQRLYK 612
>gi|328701579|ref|XP_001951487.2| PREDICTED: RNA polymerase-associated protein CTR9 homolog isoform 1
[Acyrthosiphon pisum]
Length = 1177
Score = 37.5 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 30/199 (15%), Positives = 71/199 (35%), Gaps = 18/199 (9%)
Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
+A ++F + R A L + G Q+ + + +S
Sbjct: 542 DRNQIYEASDWFKEALRIDNEHPDAWSLLGNLHLAKMEWGPGQKKFERVLKNPSTLNDSY 601
Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS--------------PY 174
++ + + + Q R+ ++R L LQ+ +++++ + Y
Sbjct: 602 SLIALGNVWLQTLHQPTRNKEQEKRHQDLALQFFTKVLKNDPKNIWAANGIGCVMAHKQY 661
Query: 175 VKGARFYVTVGRNQLAAKEVEI---GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231
+ AR R A Y+++ +Y++AI ++ + + ++ E +
Sbjct: 662 INEARDIFAQVREATADFCDVWLNIAHIYIEQKQYISAIQMYENCIKKFFKHDNV-EILQ 720
Query: 232 RLVEAYVALALMDEAREVV 250
L AY + EA++V
Sbjct: 721 YLGRAYFKAGKLKEAKKVF 739
>gi|307152867|ref|YP_003888251.1| tetratricopeptide repeat-containing protein [Cyanothece sp. PCC
7822]
gi|306983095|gb|ADN14976.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7822]
Length = 846
Score = 37.5 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 29/222 (13%), Positives = 60/222 (27%), Gaps = 4/222 (1%)
Query: 41 QSSRDVYLDSVTDVRYQREVYEK-AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99
+ +++ Y K + + + + + KA FN+ P A A +
Sbjct: 420 YQEAIADYNKAIELKPHPWAYNKRGLAYSELEEYQKAIADFNKTIELEPDADYAYNN-RG 478
Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
+ + A N +Y + + + ++ L
Sbjct: 479 NVYKDLKDYDKALADYNKAISYNYVGAYNNRGNLYLDLKEYQKALADFNKGIEIDSENSL 538
Query: 160 QYMSR--IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
Y +R + + + R +Y I + V+
Sbjct: 539 LYGNRGRVYSELKDYKKAFDDYSKAIEINPNQSFYYTLRARVSQDLKDYNTVIKDYTKVI 598
Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
+ E EA A AY L +A + + + E P
Sbjct: 599 ELKPEQEKIVEAYANRAGAYQNLKEFQKALDDANKVIELVPD 640
>gi|112385980|gb|ABI17943.1| Est5S [uncultured bacterium]
Length = 366
Score = 37.5 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 28/229 (12%), Positives = 59/229 (25%), Gaps = 24/229 (10%)
Query: 19 LYK---FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQ-NFS 74
+ K F L + L + S++ S + Y + ++
Sbjct: 3 MKKQNFFVLLASVMLVAMNLASC-KMSNKPAAETSRIGEIPEAAQYIVGIEKYDSVIDYG 61
Query: 75 KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
+A + + +L+ + +A +A + Y T +
Sbjct: 62 QAANWLD-----------VPAALVKDGTLDGTAADSLKAVDVFYIYPTVTGFRPETEVCD 110
Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
M + + + R + A +
Sbjct: 111 MTDTMMISGAKMVRQIQTGVFDESCNVFMPYYRQISMPKPGSDYRAIIDYVSKFDATDAL 170
Query: 195 EIGRYYLKRGE------YVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
+ L +G + +L NY +H EA+ R+V AY
Sbjct: 171 DYYLNNLNQGRPFILAGHSQGASVLIALLENY-MTKH-PEALKRMVAAY 217
>gi|325996655|gb|ADZ52060.1| competence lipoprotein [Helicobacter pylori 2018]
Length = 220
Score = 37.5 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 32/204 (15%), Positives = 68/204 (33%), Gaps = 6/204 (2%)
Query: 15 WAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFS 74
+ +K L I ++ V G + + + Y+ + + N
Sbjct: 1 MRLKHFKIFLFIAMAMIVIG-TGCANKKKKKDEYNKPAIFW-----YQGILREILFANLE 54
Query: 75 KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
A Y++ + + + +++L +Y A+ +EYI ++ NVDY+
Sbjct: 55 TADNYYSSLQSEHINSPLVPEAMLALGQAHMKKKEYVLASFYFDEYIKRFGTKDNVDYLT 114
Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
+L S+ ++ DQ + + +E+Y NS Y +
Sbjct: 115 FLKLQSHYYAFKNHSKDQEFISNAIVSLGEFIEKYPNSRYRPYVEYMQIKFILGQNELNR 174
Query: 195 EIGRYYLKRGEYVAAIPRFQLVLA 218
I Y KR + + +
Sbjct: 175 AIANVYKKRHKPEGVKRYLERIDE 198
>gi|322805005|emb|CBZ02565.1| beta-lactamase class A [Clostridium botulinum H04402 065]
Length = 308
Score = 37.5 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 11/54 (20%), Positives = 20/54 (37%), Gaps = 6/54 (11%)
Query: 17 YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKE 70
+L KF + IF SI + L G ++ ++ Y A ++
Sbjct: 9 LKLNKFKMCIFISILIFSLTGCGNVENK------TSENTKPEIQYNSAFSKIES 56
>gi|260494459|ref|ZP_05814589.1| conserved hypothetical protein [Fusobacterium sp. 3_1_33]
gi|260197621|gb|EEW95138.1| conserved hypothetical protein [Fusobacterium sp. 3_1_33]
Length = 289
Score = 37.5 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 18/229 (7%), Positives = 60/229 (26%), Gaps = 6/229 (2%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K L + +++ L + ++ + + + + +E F++ +
Sbjct: 1 MKKIGLIVVLTLSFLLLTNCNKDEKKETVAVKYENKNPKIKFSDDTCKLFEE--FAENKK 58
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+ + + + K + + I + +
Sbjct: 59 EIMEKLKTLNKDEANKLYEQYVEDNENILYKIVEVTEKFLDSIYYGSAEEQFTEKDWNDT 118
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
+D + ++ + + + Y+ +
Sbjct: 119 NKILNKYDLELWDIGEGMVTIRELPHLYYDIFKDYVTDDYKEYLKIWAKDDEELYQADAG 178
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY---VALALMD 244
+ E I R++ L Y ++ + A L +Y L + +
Sbjct: 179 LSISFEELGDRIARWENFLNKYPNSTLKPKVTALL-NSYREDYLLGMEN 226
>gi|256079484|ref|XP_002576017.1| o-linked n-acetylglucosamine transferase ogt [Schistosoma mansoni]
gi|238661274|emb|CAZ32252.1| o-linked n-acetylglucosamine transferase, ogt, putative
[Schistosoma mansoni]
Length = 1063
Score = 37.5 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 17/194 (8%), Positives = 39/194 (20%), Gaps = 6/194 (3%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
A + + A + + P R L + + E
Sbjct: 138 NLAAALVAAGDMESAVNAYATALQYNPDLYCVRSDLGNLLKALGRLDEAKSCYLKAIETC 197
Query: 122 ---TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
+ + + +++ A
Sbjct: 198 PTFAVAWSNLGCVFNAQNEIWLAIHHFEKAVTLDPTFLDAYVNLGNVLKEARIFDRAVAA 257
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
A + Y ++ AI ++ + + +A L A
Sbjct: 258 YLRALTLSPNNAVVHGNLACVYYEQNLIDLAIDTYKRAIELQPNFP---DAYCNLANALK 314
Query: 239 ALALMDEAREVVSL 252
+ EA E +
Sbjct: 315 EKGKVLEAEEYYNT 328
>gi|224368217|ref|YP_002602380.1| TPR repeat domain protein [Desulfobacterium autotrophicum HRM2]
gi|223690933|gb|ACN14216.1| TPR repeat domain protein [Desulfobacterium autotrophicum HRM2]
Length = 246
Score = 37.5 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 21/232 (9%), Positives = 42/232 (18%), Gaps = 16/232 (6%)
Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
I + L + + L + N++ A +
Sbjct: 4 VIIPILICITLTACATNTIEQRNI--------AEATMALGEAHLNQGNYTAALKELLAAE 55
Query: 85 RDFPFAGVARK-----SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
+ P + F + A + Q
Sbjct: 56 KTLPNDPYLHNDLGITYMGKERFDLAENHFKRAVALKPDYIQAQNNLGAAYLKQKRYDKA 115
Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
M + + +
Sbjct: 116 IECYQQFSKNLLYMTPHFAFSNMGWAYLGKKDYILAEKNFSKALHLEPDFINAIHGLALT 175
Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
+L+ GE A Q L A A L + Y + + A++
Sbjct: 176 FLESGELFQAETLLQKKLKKMPQASIL---YADLAKTYEQMNQPNRAQKAWK 224
>gi|320104835|ref|YP_004180426.1| hypothetical protein Isop_3315 [Isosphaera pallida ATCC 43644]
gi|319752117|gb|ADV63877.1| hypothetical protein Isop_3315 [Isosphaera pallida ATCC 43644]
Length = 986
Score = 37.5 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 27/209 (12%), Positives = 52/209 (24%), Gaps = 6/209 (2%)
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
Y + V K ++ A + N+ P + + L + + +A
Sbjct: 338 YFRIVALGKRGEYALAADEANRWLLSHPAYAMTVEGLGVQLQKAKNMIAQMEAQKDTLAR 397
Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
+ ++ V V Y+ + + + R +K
Sbjct: 398 TERDAATRVVRDTLRNVVRVYSPHKAEALVLLQKYDP------KSALRAEEVAKMKYDEA 451
Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
A E R + + A A L AY A
Sbjct: 452 SSAAEAAIQAGNFPEAINLLKHAINQAFVEGRSNTLEERSKTLDQANRARYLLSYAYYAN 511
Query: 241 ALMDEAREVVSLIQERYPQGYWARYVETL 269
E+ + + RYP+ A +
Sbjct: 512 GDFYESATLAEFLARRYPENGLAAKATEI 540
>gi|13324602|gb|AAK18804.1|AF305612_1 LMP1 [Borrelia burgdorferi]
Length = 1013
Score = 37.5 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 24/219 (10%), Positives = 62/219 (28%)
Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
+ VY + + Y+ ++ K + + + E FNQ R P A + ++
Sbjct: 654 KAESVYDKITKLTNAKEDYYKLGIIRFKLKKYEHSIEAFNQTIRLDPKHKKAHNNKGIAL 713
Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
+ + ++ + Y + + Q K +
Sbjct: 714 ILLNKNKQAIESFEKAIQIDKNYDTAYYQKGIAEEKTGDMQQAFVSFKNAYDLNKKLNYA 773
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
+ + + K + N E+ I + + E +++ +
Sbjct: 774 LKAGIVSNNLGNFKKSEEYLGFFNDNVKKPNEIAIYNLSIAKFENNKLEESLEIINKAIN 833
Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
E + + A + +L+ E+ P+
Sbjct: 834 LNPEKSEYLYLKASINLKNGNYQNAIPLYNLVIEKNPEN 872
>gi|315185616|gb|EFU19384.1| hypothetical protein SpithDRAFT_1907 [Spirochaeta thermophila DSM
6578]
Length = 226
Score = 37.5 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 15/112 (13%), Positives = 37/112 (33%), Gaps = 1/112 (0%)
Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
L +++ E + ++ A ++ G+ A R++ V+
Sbjct: 109 LGHLAFWQEDWDDASIWFDRLAKEFPRSYLAAVALLDAAAARENLGDTSGATTRYEKVIE 168
Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
+ A+ L + + AR++ + + E YP W+ +
Sbjct: 169 A-GFSVLKPRALFSLGRLKESSGDREGARQIYTQLLEDYPSSQWSHLARDRM 219
>gi|190890790|ref|YP_001977332.1| hypothetical protein RHECIAT_CH0001173 [Rhizobium etli CIAT 652]
gi|190696069|gb|ACE90154.1| hypothetical protein RHECIAT_CH0001173 [Rhizobium etli CIAT 652]
Length = 479
Score = 37.5 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 22/200 (11%), Positives = 49/200 (24%), Gaps = 5/200 (2%)
Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ-YSAGKYQQ 112
+Y Y A+L + +A ++ Q + P A L +
Sbjct: 275 PQYPEAHYNFAILLEETGRPDEAAAHYRQALKCRPDHVDALLRLAGLFDEWGDQFEAHHH 334
Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
N G + A Q + + + +
Sbjct: 335 FREALRLRPGFAEAHNNFGVFLEKNGDAQAAESHYRQALQLRSDYAEAHYNYAMLLEGRD 394
Query: 173 PYVKGARFYVTVGR-NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231
+ + + A +G ++G + A + + D +A
Sbjct: 395 VEAAESHYRAALSSLPMYAEAHNNLGVLLHEKGALIEARSHYLTAIRLRPDDPQTYRNLA 454
Query: 232 RLVEAYVALALMDEAREVVS 251
L+ A + ++A
Sbjct: 455 LLLAA---MGEEEQADRYAR 471
>gi|72387708|ref|XP_844278.1| hypothetical protein [Trypanosoma brucei TREU927]
gi|62359430|gb|AAX79867.1| hypothetical protein, conserved [Trypanosoma brucei]
gi|70800811|gb|AAZ10719.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 398
Score = 37.5 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 28/204 (13%), Positives = 58/204 (28%), Gaps = 13/204 (6%)
Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFP-----FAGVARKSLLMSAFVQYSAGKYQQ 112
E+++ + F ++ +F KA + + L A G + +
Sbjct: 44 EELHKSGMEFFEKGDFRKAISAWEAVLTANDGGGGGNSTTLMNCLNNLACAYGETGDHAR 103
Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
L E D+ Y + + ++ + + +LQ + ER N+
Sbjct: 104 KLKLLERSRDMVAHVYGDDHPQYGMVLYNMASAQEEMGQYQEMEDLLQRSLALHERKFNA 163
Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232
V A + A + AN+ A +AR
Sbjct: 164 ----DHPKVGRVLLLLAEAHGYLGKHEAQLQVAERADKIIRRHCGANHIQTTVAMLTLAR 219
Query: 233 L----VEAYVALALMDEAREVVSL 252
++ L L +A ++
Sbjct: 220 AHGANGNSFQRLQLAQQAYDIQET 243
>gi|223936382|ref|ZP_03628294.1| Tetratricopeptide TPR_2 repeat protein [bacterium Ellin514]
gi|223894900|gb|EEF61349.1| Tetratricopeptide TPR_2 repeat protein [bacterium Ellin514]
Length = 614
Score = 37.5 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 26/205 (12%), Positives = 54/205 (26%), Gaps = 8/205 (3%)
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG-EE 119
+ A +L+ + A F R FP +L + + + E
Sbjct: 404 WNLAQSYLEASRYEDALPIFEGLFRSFPERPELGHALFQCQLTLRKLSEATETLEVVLEG 463
Query: 120 YITQYPESKNVDYVYYLVGMSYAQM--IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
+ G + + L+ + ++ R ++
Sbjct: 464 LPAGIWSLLPRAELCLAKGQIQEARALVNEARQLHPTHPDALRRLGLLLLRLREWNALED 523
Query: 178 ARFYVTVGRNQLAAK-EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
+ A K+ A + + NY + EA L A
Sbjct: 524 LARQALKLDDNDALAWAGLAEAQLRKQLAAEATESALKAIQLNY----YLSEAHFVLARA 579
Query: 237 YVALALMDEAREVVSLIQERYPQGY 261
VA +AR+ + ++ + P
Sbjct: 580 LVAKGKWAQARDAMQVLLQLQPNNR 604
>gi|301167768|emb|CBW27352.1| putative exported protein [Bacteriovorax marinus SJ]
Length = 563
Score = 37.5 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 19/253 (7%), Positives = 65/253 (25%), Gaps = 28/253 (11%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + +F+ + + LV + + +K+ +++ A +
Sbjct: 1 MVRVKKLLFYFLCITLLVSCASRGRKISREL---------------RSMVKQGDYANALK 45
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
L+ + + G+Y ++ + EE T + V L
Sbjct: 46 SLEASEFFKKNPESKLLYLMEKGLIYHGLGRYAKSIEVFEEAKTLARKQYTVRISKKLKT 105
Query: 139 MSYAQMIRDVPYDQR-----ATKLMLQYMSRIVERYTNSPY-VKGARFYVTVGRNQLAAK 192
+ ++ L + + + + + + K
Sbjct: 106 YIANESSDIYYGEKYELSTLFYYQALNHFILSYKDEVDHEKLAEKGEIKLEWKKQSDNDK 165
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA-------LMDE 245
+ R + + + + + + ++ A + +
Sbjct: 166 RQSLFRARAELLAWDSFLKDLKNERSGNPVFKNDLSAKILGARIHETIGTSQDREIAYQL 225
Query: 246 AREVVSLIQERYP 258
++ L+ + Y
Sbjct: 226 YKDASILLIKNYN 238
>gi|291570132|dbj|BAI92404.1| probable transglycosylase [Arthrospira platensis NIES-39]
Length = 730
Score = 37.5 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 21/221 (9%), Positives = 65/221 (29%), Gaps = 7/221 (3%)
Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
+ + ++ ++++ +++ + + L + + S YQ+
Sbjct: 224 QQLTPEDWENIGFGYWEKMDYARGAIAYSKAPKTPRNMYRHARGLWLGGKIPESRRAYQE 283
Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQ----MIRDVPYDQRATKLMLQYMSRIVER 168
+ E + + + + + + V + + ++++
Sbjct: 284 LIAAFPTQTDPGGEDAGLGRIRLARLVEPREALPLLNQVVENFPNHAAEAVLDRANVLDK 343
Query: 169 YTNSPYVKGARF---YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
++ +R A + + G A + ++ D+E
Sbjct: 344 LGSTETASQSRQLLLSQYSDSEAAAQLRWTLAQQGATAGRLDIASEWARQLVNKNPDSEL 403
Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
A +A L +A + + RYP+ Y+A
Sbjct: 404 APQATFMLGRWARQQGNSKDATKAFEYLLARYPESYYAWRA 444
>gi|255535225|ref|YP_003095596.1| two-component system sensor histidine kinase [Flavobacteriaceae
bacterium 3519-10]
gi|255341421|gb|ACU07534.1| two-component system sensor histidine kinase [Flavobacteriaceae
bacterium 3519-10]
Length = 547
Score = 37.5 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 12/179 (6%), Positives = 43/179 (24%), Gaps = 14/179 (7%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
+ F + + + +V +Y+KA + +A+ F
Sbjct: 1 MKIIHSPFLCILLLVFACSDKK----------EVSAADTLYKKAERLYDGGEYEQAFPGF 50
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
+ + R + A+ Q ++ + + S
Sbjct: 51 YSAYQAYMTEQKPRDA----AYSLVFLAIIQTEKGDFLGSNENLSKALKLSATDETLLTS 106
Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
+ + + + + + + Y + + + ++ +
Sbjct: 107 VYNQFAINHNLLQNHENAVYWYHKALPLTEHQYYKLSIKNNIGIAYLKMGRYATAESLF 165
>gi|291327115|ref|ZP_06127041.2| lipoprotein NlpI [Providencia rettgeri DSM 1131]
gi|291311605|gb|EFE52058.1| lipoprotein NlpI [Providencia rettgeri DSM 1131]
Length = 288
Score = 37.5 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 37/256 (14%), Positives = 67/256 (26%), Gaps = 26/256 (10%)
Query: 27 FFSIAVCFLVGWERQSSRDVYL------------------------DSVTDVRYQREVYE 62
++ ++G + R + S+TD Y + +YE
Sbjct: 2 LLALIFFVIIGCSSKDWRKNEVFAVPLQPSLQQEVILARMEQILASRSLTDDEYAQLLYE 61
Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
+ VL+ + A F+ P L + + +A E
Sbjct: 62 RGVLYDSLGLRALARNDFSTALAIRPDIPEVFNFLGIYFTQAGNYDAAYEAFDSVLELDP 121
Query: 123 QYPESKNVDYVYYLVGMSYAQMIRD--VPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
Y ++ + G Y D Y +VE+ + +
Sbjct: 122 TYNFARMNRGIALYYGERYKLAQDDLLAYYQIDPNDPFRTLWLYLVEKDIDPRMAQDNLA 181
Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
+ + Y E + N S AEH E L + Y++L
Sbjct: 182 ARYNQAEKGQWGWNIVEFYLGNINENTLMERLKETSTDNTSLAEHLSETNFYLGKHYLSL 241
Query: 241 ALMDEAREVVSLIQER 256
D A + L
Sbjct: 242 GDKDSAVALFKLTVAN 257
>gi|109947176|ref|YP_664404.1| hypothetical protein Hac_0589 [Helicobacter acinonychis str.
Sheeba]
gi|109714397|emb|CAJ99405.1| conserved hypothetical protein [Helicobacter acinonychis str.
Sheeba]
Length = 330
Score = 37.5 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 23/231 (9%), Positives = 74/231 (32%), Gaps = 10/231 (4%)
Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
++ ++ D+R + ++A+ L EQN + ++ VA+ +L+
Sbjct: 100 NNTLKQQSQTLDDLRNEIRANQQAIQQLDEQN-----KQMSELLTKLSQDLVAQIALIQK 154
Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
A + + ++ + +D+ + + L
Sbjct: 155 ALKEQQDKTEKSLKINALANENPPLKAYAKQEGNTEEKPLQVEFNKDLSKQKEVFQEALS 214
Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220
+ + + + ++ +LA +G ++ AI ++
Sbjct: 215 -----LLKDKSYAQARERLLWLEANSYKLAYVRYALGEVAYNEKKHREAIKYYKESALLD 269
Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
A + + + ++ + + ++ +Q YP A+ + +++
Sbjct: 270 QKAPYMPVLLWHVAWSFKKIKDDKNYHKFLNTLQRLYPSSDQAKKAKKILE 320
>gi|86159124|ref|YP_465909.1| hypothetical protein Adeh_2702 [Anaeromyxobacter dehalogenans
2CP-C]
gi|85775635|gb|ABC82472.1| hypothetical protein Adeh_2702 [Anaeromyxobacter dehalogenans
2CP-C]
Length = 285
Score = 37.5 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 16/90 (17%), Positives = 25/90 (27%)
Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
+E Y G AA + Y + A+ RL
Sbjct: 171 EDFTARYPRHPAADNALLESAEAYAAAGRNEAACALVRRTADEYPAGDAMSAALERLAAC 230
Query: 237 YVALALMDEAREVVSLIQERYPQGYWARYV 266
L DE R ++ + + YP A+
Sbjct: 231 AARLGRADEERSLLQRLVDDYPGTPAAQRA 260
>gi|157693154|ref|YP_001487616.1| TPR repeat-containing protein [Bacillus pumilus SAFR-032]
gi|157681912|gb|ABV63056.1| tetratricopeptide repeat protein [Bacillus pumilus SAFR-032]
Length = 217
Score = 37.5 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 27/210 (12%), Positives = 53/210 (25%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
E + L + N KA E F + + P V + + E
Sbjct: 5 EIGIEALNQGNIEKAAEAFTKAIEESPKDPVPYINFANLLSSINEFERALNFFQKAIELD 64
Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
+ Y + + + +A + + K A Y
Sbjct: 65 HAAAAAYYGAGNVYTLKEDFMKAKDYFEQALKAGMENSDLFYMLGQTLIKLEQPKLAMPY 124
Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
+ ++ + + +A L AY L
Sbjct: 125 LQRAIELNEDDNEARFQFGMCLANEQLLEEAVTTFTEVVTRDPQHADAFYNLGVAYAYLE 184
Query: 242 LMDEAREVVSLIQERYPQGYWARYVETLVK 271
DEA E++ + P A + + L++
Sbjct: 185 KKDEALEMLGKAIDVQPNHMLALHAQKLIQ 214
>gi|15645988|ref|NP_208169.1| competence lipoprotein (comL) [Helicobacter pylori 26695]
gi|108563749|ref|YP_628065.1| competence lipoprotein [Helicobacter pylori HPAG1]
gi|188528168|ref|YP_001910855.1| competence lipoprotein [Helicobacter pylori Shi470]
gi|217034451|ref|ZP_03439864.1| hypothetical protein HP9810_11g33 [Helicobacter pylori 98-10]
gi|254779917|ref|YP_003058023.1| hypothetical protein HELPY_1365 [Helicobacter pylori B38]
gi|308183491|ref|YP_003927618.1| hypothetical protein HPPC_06800 [Helicobacter pylori PeCan4]
gi|2314548|gb|AAD08420.1| competence lipoprotein (comL) [Helicobacter pylori 26695]
gi|107837522|gb|ABF85391.1| competence lipoprotein [Helicobacter pylori HPAG1]
gi|188144408|gb|ACD48825.1| competence lipoprotein [Helicobacter pylori Shi470]
gi|216943121|gb|EEC22595.1| hypothetical protein HP9810_11g33 [Helicobacter pylori 98-10]
gi|254001829|emb|CAX30072.1| Conserved hypothetical protein [Helicobacter pylori B38]
gi|261837482|gb|ACX97248.1| competence lipoprotein [Helicobacter pylori 51]
gi|261838898|gb|ACX98663.1| competence lipoprotein (comL) [Helicobacter pylori 52]
gi|308064154|gb|ADO06041.1| hypothetical protein HPSAT_06685 [Helicobacter pylori Sat464]
gi|308065676|gb|ADO07568.1| hypothetical protein HPPC_06800 [Helicobacter pylori PeCan4]
gi|315586018|gb|ADU40399.1| competence lipoprotein [Helicobacter pylori 35A]
gi|317013165|gb|ADU83773.1| hypothetical protein HPLT_06915 [Helicobacter pylori Lithuania75]
gi|317176833|dbj|BAJ54622.1| competence lipoprotein [Helicobacter pylori F16]
gi|317178334|dbj|BAJ56122.1| competence lipoprotein [Helicobacter pylori F30]
gi|317181315|dbj|BAJ59099.1| competence lipoprotein [Helicobacter pylori F57]
gi|332672817|gb|AEE69634.1| competence lipoprotein [Helicobacter pylori 83]
Length = 220
Score = 37.5 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 33/204 (16%), Positives = 68/204 (33%), Gaps = 6/204 (2%)
Query: 15 WAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFS 74
+ +K L I +I V G + + + Y+ + + N
Sbjct: 1 MRLKHFKTFLFITMAIIVIG-TGCANKKKKKDEYNKPAIFW-----YQGILREILFANLE 54
Query: 75 KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
A Y++ + + + +++L +Y A+ +EYI ++ NVDY+
Sbjct: 55 TADNYYSSLQSEHINSPLVPEAMLALGQAHMKKKEYVLASFYFDEYIKRFGTKDNVDYLT 114
Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
+L S+ ++ DQ + + +E+Y NS Y +
Sbjct: 115 FLKLQSHYYAFKNHSKDQEFISNSIVSLGEFIEKYPNSRYRPYVEYMQIKFILGQNELNR 174
Query: 195 EIGRYYLKRGEYVAAIPRFQLVLA 218
I Y KR + + +
Sbjct: 175 AIANVYKKRHKPEGVKRYLERIDE 198
>gi|329769675|ref|ZP_08261079.1| hypothetical protein HMPREF0433_00843 [Gemella sanguinis M325]
gi|328838430|gb|EGF88039.1| hypothetical protein HMPREF0433_00843 [Gemella sanguinis M325]
Length = 272
Score = 37.5 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 22/62 (35%), Gaps = 4/62 (6%)
Query: 16 AYQ-LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV---YEKAVLFLKEQ 71
Y+ L K L I I L +S + +S +EV Y +AV +
Sbjct: 1 MYKSLRKILLIISTVILSVVLAACGGKSQTESQQESQPKPLTSQEVIEKYSEAVKNVNSF 60
Query: 72 NF 73
+
Sbjct: 61 KY 62
>gi|288800699|ref|ZP_06406156.1| putative TPR domain protein [Prevotella sp. oral taxon 299 str.
F0039]
gi|288332160|gb|EFC70641.1| putative TPR domain protein [Prevotella sp. oral taxon 299 str.
F0039]
Length = 1116
Score = 37.5 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 19/200 (9%), Positives = 55/200 (27%), Gaps = 10/200 (5%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
+ + N + + +++ + A + L + + +
Sbjct: 475 DDGRDIISNNNANDSKQWYFYNQQVVNQGKAAFEKLWGRRENTDNWQRSNKTVVGTNTNK 534
Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
+N D + S + ++ K Y + +
Sbjct: 535 QNAVGQENNDTTDVIDMDSPTDSVPNMSDSSDPHKRS--YYLAQIPFTPEQLKESNDKLS 592
Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
+ ++ + K+ + + F + + H EA L Y
Sbjct: 593 NALYQSAVIFKD--------ELDNLRLSERNFMRLENQFPGNSHEAEAYYHLYLLYSRNK 644
Query: 242 LMDEAREVVSLIQERYPQGY 261
+A ++L++++YP+
Sbjct: 645 NTAKANHYLALLKDKYPKNE 664
>gi|322420030|ref|YP_004199253.1| TPR repeat-containing protein [Geobacter sp. M18]
gi|320126417|gb|ADW13977.1| Tetratricopeptide TPR_1 repeat-containing protein [Geobacter sp.
M18]
Length = 572
Score = 37.5 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 24/192 (12%), Positives = 54/192 (28%), Gaps = 7/192 (3%)
Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE---Y 120
+LFL+ + + +A + F + P A R L + + + Y
Sbjct: 289 GLLFLELERYDEAIKTFQDILKVEPDAQQVRFYLASAYEEKEDVDQAIVEFRKISRESPY 348
Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
Y ++++ Q + +++ E
Sbjct: 349 YLDALGHLAYLYKEKGSPEQGIALLQEEIAQQPSRIETYLHLAGFYESMEQYQKGIDTLK 408
Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
+ +G + K G+ ++ + VL D +A+ L Y +
Sbjct: 409 SMDSKLQADPRALFRLGILHDKMGQKELSVSMMKKVLEATPDDP---QALNYLGYTYAEM 465
Query: 241 ALM-DEAREVVS 251
+EA +
Sbjct: 466 GENLEEALGYLK 477
>gi|170725108|ref|YP_001759134.1| TPR repeat-containing protein [Shewanella woodyi ATCC 51908]
gi|169810455|gb|ACA85039.1| TPR repeat-containing protein [Shewanella woodyi ATCC 51908]
Length = 164
Score = 37.5 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 10/113 (8%), Positives = 23/113 (20%), Gaps = 4/113 (3%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + +++ L G + + + +A K +A
Sbjct: 1 MARLIFKALLILSLMHLFGCASSTQEK----EPKGNQQIMVLQSEAEQAYKMARLDQAES 56
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
+ Q P L A E ++
Sbjct: 57 LYLQVLTSVPNYAPGWFRLGNIYTRTGRQDAAVSAYMRCLELDPSNQKAWYNM 109
>gi|222053775|ref|YP_002536137.1| hypothetical protein [Geobacter sp. FRC-32]
gi|221563064|gb|ACM19036.1| TPR repeat-containing protein [Geobacter sp. FRC-32]
Length = 391
Score = 37.5 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 30/203 (14%), Positives = 59/203 (29%), Gaps = 6/203 (2%)
Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
A+ L++ + +A + P + A K L M+ + A
Sbjct: 22 QLTANYAMNGALQALQDGKYDRAASQLKRVLALTPDSTNAYKYLGMAYSGMGKSNDAIAA 81
Query: 114 ASLGEEYI---TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
+ + Y+ + + + + +
Sbjct: 82 YKNAVRLEPGSSSAHKDLGNAYLEAKRYPEAEKEFQATARIDSTSTYAPYTLGFLYLNTG 141
Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
+ V + A +G Y K G+Y AI + Q+ + D A
Sbjct: 142 REQEAEAQFKKVIAIDRRDAHGYYGLGMAYSKMGKYDEAIEQLQMAVKIDKDFAL---AH 198
Query: 231 ARLVEAYVALALMDEAREVVSLI 253
+ L +AY A D+A+E V +
Sbjct: 199 SELGKAYAATTQKDKAQEEVETL 221
>gi|5052534|gb|AAD38597.1|AF145622_1 BcDNA.GH04245 [Drosophila melanogaster]
Length = 1011
Score = 37.5 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 17/205 (8%), Positives = 43/205 (20%), Gaps = 9/205 (4%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
A + ++ A + + + P R L + + E
Sbjct: 157 NLAAALVAARDMESAVQAYITALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETC 216
Query: 122 ---TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
+ + + +++ A
Sbjct: 217 PGFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAA 276
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
A + Y ++G AI ++ + + +A L A
Sbjct: 277 YLRALNLSPNNAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPNFP---DAYCNLANALK 333
Query: 239 ALALMDEARE---VVSLIQERYPQG 260
+ EA + + +
Sbjct: 334 EKGQVKEAEDCYNTALRLCSNHADS 358
>gi|317011474|gb|ADU85221.1| paralysed flagella protein [Helicobacter pylori SouthAfrica7]
Length = 803
Score = 37.1 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 9/50 (18%), Positives = 16/50 (32%)
Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
NY + EA+ + +A +A I Y +A +
Sbjct: 263 KNYPADPNIPEALYYVAKALNENNNYKQAMRFYKRILLEYKNSRYAPLAQ 312
>gi|301766542|ref|XP_002918691.1| PREDICTED: dnaJ homolog subfamily C member 3-like [Ailuropoda
melanoleuca]
gi|281347405|gb|EFB22989.1| hypothetical protein PANDA_007195 [Ailuropoda melanoleuca]
Length = 504
Score = 37.1 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 22/258 (8%), Positives = 67/258 (25%), Gaps = 20/258 (7%)
Query: 34 FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93
L ++ + + + +A+ + +++ A + ++ +
Sbjct: 131 VLKSNPSENEEKEAQLQLVKSDEMQRLRSQALDAFESSDYTAAITFLDKILEVCVWDAEL 190
Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153
R+ + K + E+ Y + + +V +
Sbjct: 191 RELRAECFIKEGEPRKAISDLKAASKLKNDNTEAFYKISTLYYQLGDHELSLSEVRECLK 250
Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK----------- 202
+ + + + + ++ A + GR A + E
Sbjct: 251 LDQDHKRCFAHYKQVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPSVSEYTIRSKE 310
Query: 203 -----RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA-REVVSLIQER 256
+ + ++ A+ EAY+ + DEA ++ + +
Sbjct: 311 RICHCFSKDEKPVEAIRVCSEVLQMEPDNVNALKDRAEAYLIEEMYDEAIQDYETAQEHN 370
Query: 257 YPQGYWA---RYVETLVK 271
+ L+K
Sbjct: 371 ENDQQIREGLEKAQRLLK 388
>gi|239908655|ref|YP_002955397.1| hypothetical protein DMR_40200 [Desulfovibrio magneticus RS-1]
gi|239798522|dbj|BAH77511.1| hypothetical protein [Desulfovibrio magneticus RS-1]
Length = 213
Score = 37.1 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 26/79 (32%), Gaps = 3/79 (3%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K +T+ A L+G + + ++ Y+ V +++ A
Sbjct: 1 MAKHLMTV--LAAAVLLMGLAACQPQQTVVV-AAPQASAQDYYDAGVRAFTMGDYNNAAA 57
Query: 79 YFNQCSRDFPFAGVARKSL 97
F+ R P A L
Sbjct: 58 QFDAAVRMAPGMADAYWYL 76
>gi|262199073|ref|YP_003270282.1| lytic transglycosylase catalytic [Haliangium ochraceum DSM 14365]
gi|262082420|gb|ACY18389.1| Lytic transglycosylase catalytic [Haliangium ochraceum DSM 14365]
Length = 797
Score = 37.1 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 29/218 (13%), Positives = 61/218 (27%), Gaps = 8/218 (3%)
Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
Y A + +A ++ + P + +K+ + + + + A
Sbjct: 199 AEARYRLAQALDQRTQIGEALTHYRTLTIHVPLSSWGQKAQERIDALLPTQPESENARIR 258
Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
D ++ + R + +
Sbjct: 259 SMNASEYIARGMAYFDAMRNPLSEADFAAALSTSDITPSEHCVAAFHRAQSVFKARDRKR 318
Query: 177 GARFYVTVGRNQLAAKE--------VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
A + +A + GR Y G++ AI R+Q + ++
Sbjct: 319 AAPLFDEAIAACASAHNLDLQVKSAYQAGRSYAFEGQHQIAIARYQQAETIDPSHTYVDD 378
Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
A R E Y +L D +++ I E+YP+G
Sbjct: 379 ARLRQAEEYTSLDDQDTVTLLLASIPEKYPEGDMRAEA 416
Score = 37.1 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 17/142 (11%), Positives = 35/142 (24%), Gaps = 11/142 (7%)
Query: 140 SYAQMIRDVPYDQRATKLMLQYM----SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
+ + L + + Y ++A K +
Sbjct: 101 ECDARLSAWAPAAAGFEQALAQFPKLADYLHYQAARGFYFAHDSERAMTHARKVAPKSIT 160
Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDA-------EHAEEAMARLVEAYVALALMDEARE 248
+ G+ + + V A+Y EA RL +A + EA
Sbjct: 161 GADAAMLVGDLLRGDELWDQVAAHYRGYLDGGVHRTRRAEARYRLAQALDQRTQIGEALT 220
Query: 249 VVSLIQERYPQGYWARYVETLV 270
+ P W + + +
Sbjct: 221 HYRTLTIHVPLSSWGQKAQERI 242
>gi|206972232|ref|ZP_03233179.1| putative lipoprotein [Bacillus cereus AH1134]
gi|229067935|ref|ZP_04201249.1| hypothetical protein bcere0025_1560 [Bacillus cereus F65185]
gi|229188455|ref|ZP_04315502.1| hypothetical protein bcere0002_1560 [Bacillus cereus ATCC 10876]
gi|206732806|gb|EDZ49981.1| putative lipoprotein [Bacillus cereus AH1134]
gi|228595009|gb|EEK52781.1| hypothetical protein bcere0002_1560 [Bacillus cereus ATCC 10876]
gi|228715144|gb|EEL67006.1| hypothetical protein bcere0025_1560 [Bacillus cereus F65185]
Length = 254
Score = 37.1 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 22/59 (37%), Gaps = 5/59 (8%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV-----YEKAVLFLKEQN 72
+ K L +AV VG + ++ V+ ++E+ + KA K +
Sbjct: 1 MKKLILISSLVLAVGLGVGCSNEKTKKTDEPKKEAVQKEKELTAKDVFNKANEAFKNEE 59
>gi|94967940|ref|YP_589988.1| TPR repeat-containing protein [Candidatus Koribacter versatilis
Ellin345]
gi|94549990|gb|ABF39914.1| Tetratricopeptide repeat protein [Candidatus Koribacter versatilis
Ellin345]
Length = 515
Score = 37.1 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 26/214 (12%), Positives = 54/214 (25%), Gaps = 8/214 (3%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
+ A+L K ++ + + A + V + +
Sbjct: 136 QLALLQEKAGRYADSVATIQKIPVASRSADLLPTLASDYLNVHQEQKLAPLVQQVVKLGP 195
Query: 122 TQYPESKNVDYVYYLVGMSYAQMIR-DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
+ V G + + T L ++R+ E N P
Sbjct: 196 ANSNVMLDFVAVLVRNGYIQDSEKILQIARPSKPTAKYLHTLARVREAQDNLPEASKLFQ 255
Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
+ + R+ + + A+ Q D E + +L AY+
Sbjct: 256 QALQLDPKSFDLLFDGARFSGQHNRWDEAVGYLQKCDEVNPD---RPEVLLKLTLAYLKT 312
Query: 241 ALMDEAREVVSLIQE---RYPQGYWARYVETLVK 271
++A V + P LV+
Sbjct: 313 RRREKAVSVARRLASVSPNDPNAQ-YILAFALVE 345
>gi|90022172|ref|YP_527999.1| hypothetical protein Sde_2527 [Saccharophagus degradans 2-40]
gi|89951772|gb|ABD81787.1| Tetratricopeptide TPR_2 [Saccharophagus degradans 2-40]
Length = 255
Score = 37.1 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 14/67 (20%), Positives = 29/67 (43%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ L++ +Y A+ + L NY +A A L E Y+ ++++R+ S
Sbjct: 137 YKDAIDLVLRKQDYKNAVIALKQHLDNYPKGRYAANAQYWLGELYLKDNELEQSRQWFSR 196
Query: 253 IQERYPQ 259
+ +P
Sbjct: 197 LLGEFPN 203
>gi|322384466|ref|ZP_08058148.1| hypothetical protein PL1_2975 [Paenibacillus larvae subsp. larvae
B-3650]
gi|321150676|gb|EFX44151.1| hypothetical protein PL1_2975 [Paenibacillus larvae subsp. larvae
B-3650]
Length = 588
Score = 37.1 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 13/137 (9%), Positives = 37/137 (27%), Gaps = 4/137 (2%)
Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT--VGRNQLAAKEV 194
+ + R V+ Y K +++ +
Sbjct: 1 MQKKKRVSTTHEKKIIPIQMDATFFFERAVQSLDRFHYDKALKYFRRAVEYEDDNPVNYC 60
Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
+ + G+Y + Q ++ + E + Y + + A + +
Sbjct: 61 NLAGVLSEMGQYEESNMILQQIMDDID--PKMTECYFYMANNYANMEDYELAEKALVRYL 118
Query: 255 ERYPQGYWARYVETLVK 271
E P G + + +++
Sbjct: 119 ENDPSGNFLEESQEMME 135
>gi|317061663|ref|ZP_07926148.1| high-affinity iron permease [Fusobacterium sp. D12]
gi|313687339|gb|EFS24174.1| high-affinity iron permease [Fusobacterium sp. D12]
Length = 450
Score = 37.1 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 12/129 (9%), Positives = 38/129 (29%), Gaps = 2/129 (1%)
Query: 1 MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDV--RYQR 58
M+ I + W + +K + F A+ F + + +
Sbjct: 1 MNRFYNFGIELGVEWMRKCFKKLFALLFVFALFFTLNCSEMEAAQKKKYETWQEVAKDMN 60
Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
++ A ++ + AY++ N ++ K+++++ + +
Sbjct: 61 LEFQDAKKSIEMGDADAAYKFMNNAYFNYYEVQGFEKNVMVNISAKRVNEIEAMFRKIKH 120
Query: 119 EYITQYPES 127
+
Sbjct: 121 TLKGNIEGN 129
>gi|291526081|emb|CBK91668.1| Tetratricopeptide repeat [Eubacterium rectale DSM 17629]
Length = 320
Score = 37.1 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 20/239 (8%), Positives = 57/239 (23%), Gaps = 14/239 (5%)
Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEK-AVLFLKEQNFS 74
+ ALT+ + L G ++ Y + + ++ ++
Sbjct: 1 MIKNKFMALTLTVVLTAGMLTGCGSGDKAK-----------DKDAYRQYGINCIENGSYD 49
Query: 75 KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
A + F + + A + + + ++ + Y
Sbjct: 50 DAVDAFQKALDQSVGSVGAEELDICYYKAKAQYLSGDVDGAIDTYTAIIDYNKDSDAYYL 109
Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
D + + + G + +
Sbjct: 110 RGCIYFAKNDSDKGLKDFKTALSENDDNYELYLGVYETLSKYGMNDQGKEYLDNALKLKA 169
Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAE--HAEEAMARLVEAYVALALMDEAREVVS 251
+ Y++RG + + + + A +A + E Y D +++
Sbjct: 170 KTADDYMQRGRIYTMLGDYDSAIKSLQKAIDEKLVKANYYMGEVYQKKGDNDSSQKYFK 228
>gi|119485213|ref|ZP_01619598.1| hypothetical protein L8106_07184 [Lyngbya sp. PCC 8106]
gi|119457441|gb|EAW38566.1| hypothetical protein L8106_07184 [Lyngbya sp. PCC 8106]
Length = 272
Score = 37.1 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 26/244 (10%), Positives = 61/244 (25%), Gaps = 37/244 (15%)
Query: 19 LYKFALTIFFSIAVCFLVG---WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
+ F + + F + ++G ++ +S V+ + +A F++
Sbjct: 1 MQLFWIIVTFLVFSLQILGGYANPAYAASGSLAESTEIVQDVENLLNQAFDASNTGKFAE 60
Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
A Y+ Q + +P + + + I N
Sbjct: 61 AETYWTQIIKQYPDNAAMWSNRGN--------------VRVSQNKIEAALSDYNKAIELA 106
Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
+ + + ++E A
Sbjct: 107 PNAPDPYLNRGVAYERLERWQDAIADYNHVLELSGE-----------------DAVAYNN 149
Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
G G++ AAI ++ + A A A ++A + +
Sbjct: 150 RGNAEAGLGDWKAAIIDYETAAELDPNYAF---ARANYALALYQDGQTEKAIRTMKNLVR 206
Query: 256 RYPQ 259
+YP
Sbjct: 207 KYPN 210
>gi|303327039|ref|ZP_07357481.1| TPR domain protein [Desulfovibrio sp. 3_1_syn3]
gi|302863027|gb|EFL85959.1| TPR domain protein [Desulfovibrio sp. 3_1_syn3]
Length = 579
Score = 37.1 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 25/214 (11%), Positives = 58/214 (27%), Gaps = 7/214 (3%)
Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
+ L Y +Y +A+L E +A P + + +
Sbjct: 54 EAELSPEARNTYAYLLYAQALLDEDEAALLQAASMLK--ESPVPAKVWMEGGVWLMSRKS 111
Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
+A + A + + + ++R + ++
Sbjct: 112 PNAVILLEQALSVWPEDMSLNLLYAEALMEHGMPERGVTLMRVYLQKHPDSLDARLELAL 171
Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
++ + + + + + R + A+P Q + D
Sbjct: 172 LLVKSKQFTEAEKL-LNSIPAKQRSPLVDYYHARALIGMARQNDAVPYLQKAVKEMPDFV 230
Query: 225 HAEEAMARLVEAYVALALMDEARE-VVSLIQERY 257
EA+A L + + EAR LI+ +
Sbjct: 231 ---EALAELAFIHEQRGELREARTVYEKLIKLNF 261
>gi|284038099|ref|YP_003388029.1| hypothetical protein Slin_3219 [Spirosoma linguale DSM 74]
gi|283817392|gb|ADB39230.1| Tetratricopeptide TPR_2 repeat protein [Spirosoma linguale DSM 74]
Length = 749
Score = 37.1 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 14/69 (20%), Positives = 23/69 (33%), Gaps = 3/69 (4%)
Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
+ AIP F+ +L Y + E L + + +A + YP
Sbjct: 583 FDFNQPANAIPTFEKLLTRYPNTLQKPEVYYLLYLSNEQIG---KASPWKEKLLAEYPNT 639
Query: 261 YWARYVETL 269
+AR L
Sbjct: 640 SYARLAGKL 648
>gi|326205052|ref|ZP_08194897.1| hypothetical protein Cpap_0007 [Clostridium papyrosolvens DSM 2782]
gi|325984797|gb|EGD45648.1| hypothetical protein Cpap_0007 [Clostridium papyrosolvens DSM 2782]
Length = 176
Score = 37.1 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 13/96 (13%), Positives = 29/96 (30%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K + I +++ FL SR L+ D E+ + +K ++
Sbjct: 1 MMKQIIVILLIVSMFFLCSCSLGESRVQMLNKDNDEGKADARLEQIIEAIKSKDKDSLKT 60
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
F++ + + R L +
Sbjct: 61 VFSKQALNEAEDLDGRMDYLFNFVQGNVESWKTIVH 96
>gi|228950716|ref|ZP_04112849.1| hypothetical protein bthur0006_1550 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|228808952|gb|EEM55438.1| hypothetical protein bthur0006_1550 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
Length = 254
Score = 37.1 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 22/59 (37%), Gaps = 5/59 (8%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV-----YEKAVLFLKEQN 72
+ K L +AV VG + ++ V+ ++E+ + KA K +
Sbjct: 1 MKKLILISSLVLAVGLGVGCSNEKTKKTDEPKKEAVQKEKELTAKDVFNKANEAFKNEE 59
>gi|224024034|ref|ZP_03642400.1| hypothetical protein BACCOPRO_00751 [Bacteroides coprophilus DSM
18228]
gi|224017256|gb|EEF75268.1| hypothetical protein BACCOPRO_00751 [Bacteroides coprophilus DSM
18228]
Length = 284
Score = 37.1 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 23/218 (10%), Positives = 54/218 (24%), Gaps = 20/218 (9%)
Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
+ +Y +A+ + + ++ A YFN +P + A
Sbjct: 67 EEALYMQAMTYFNQGDYVTASHYFNTYYTTYPRG-----------------TYTELARFN 109
Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
+ +D + QM + + + ++ Y+
Sbjct: 110 CGRALYLDTPEPRLDQSSTYKAIEELQMFIEYFPMSSRKDQAQSMIFELQDKLVEKEYMS 169
Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
+Y A Y + + + A +
Sbjct: 170 AKLYYDLGSYTGNAVYSSTGNNYLAAVITAQNILKEYPYTKMREDLSILILRAKYGMARE 229
Query: 237 YVALALMDEAREV---VSLIQERYPQGYWARYVETLVK 271
V D R+ +P+ + + VE++ K
Sbjct: 230 SVLEKKEDRMRDTIDEYYAFINEFPESKYRKEVESIFK 267
>gi|154687382|ref|YP_001422543.1| YusA [Bacillus amyloliquefaciens FZB42]
gi|154353233|gb|ABS75312.1| YusA [Bacillus amyloliquefaciens FZB42]
Length = 271
Score = 37.1 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 10/70 (14%), Positives = 21/70 (30%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K L+ + L S + E+ ++A LKE+ ++ +
Sbjct: 1 MKKIVLSALLLVFAGVLAACGSNGSNKKEIVVAATKTPHAEILKEAEPLLKEKGYTLKVK 60
Query: 79 YFNQCSRDFP 88
N
Sbjct: 61 VLNDYKMYNK 70
>gi|313157952|gb|EFR57358.1| putative lipoprotein [Alistipes sp. HGB5]
Length = 171
Score = 37.1 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 13/63 (20%), Positives = 25/63 (39%), Gaps = 4/63 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + I + L G Q S + S + +Y +A+ L+E+NF +
Sbjct: 1 MKTILKPLSIIILIMALAGCAAQKSGNTPGKSTA----EEVLYTQALKALEERNFIIKID 56
Query: 79 YFN 81
F+
Sbjct: 57 EFH 59
>gi|156051856|ref|XP_001591889.1| hypothetical protein SS1G_07335 [Sclerotinia sclerotiorum 1980]
gi|154705113|gb|EDO04852.1| hypothetical protein SS1G_07335 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 695
Score = 37.1 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 25/232 (10%), Positives = 61/232 (26%), Gaps = 18/232 (7%)
Query: 55 RYQREVYEKA-VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL--MSAFVQYSAGKYQ 111
E+++ A + K + + KA E + + P + + A QY
Sbjct: 195 LEDAEIFKDAGNRYYKAKQYKKAIEEYTKAVDAMPLSSTYINNRAAAYMAAGQYYQALED 254
Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
+ + + + A + K M + + +
Sbjct: 255 SKRADQLDPNNHKVLLRLARIYISMGLPQEAMDTFGRIQPPPSAKDMAPAKAMLQHLASA 314
Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY----------- 220
+ +K + + + A K + G ++ + + ++ N
Sbjct: 315 AEALKNGTGSMAIHSIEQAEKLLGTGVPRPRKWQLMRGEAYLKMGNVNALGDAQNVAMSL 374
Query: 221 -SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
EA+ A + D+A + P R ++
Sbjct: 375 LRGNSQDPEALVLRGRALYSQGENDKAIQHFRQALTCDPD---YRDAVKYLR 423
>gi|6753882|ref|NP_034349.1| peptidyl-prolyl cis-trans isomerase FKBP4 [Mus musculus]
gi|18314334|sp|P30416|FKBP4_MOUSE RecName: Full=Peptidyl-prolyl cis-trans isomerase FKBP4;
Short=PPIase FKBP4; AltName: Full=52 kDa FK506-binding
protein; Short=52 kDa FKBP; Short=FKBP-52; AltName:
Full=59 kDa immunophilin; Short=p59; AltName:
Full=FK506-binding protein 4; Short=FKBP-4; AltName:
Full=FKBP59; AltName: Full=HSP-binding immunophilin;
Short=HBI; AltName: Full=Immunophilin FKBP52; AltName:
Full=Rotamase; Contains: RecName: Full=Peptidyl-prolyl
cis-trans isomerase FKBP4, N-terminally processed
gi|410499|emb|CAA50231.1| p59 immunophilin [Mus musculus]
gi|26350841|dbj|BAC39057.1| unnamed protein product [Mus musculus]
gi|148667471|gb|EDK99887.1| FK506 binding protein 4, isoform CRA_b [Mus musculus]
Length = 458
Score = 37.1 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 29/191 (15%), Positives = 60/191 (31%), Gaps = 5/191 (2%)
Query: 74 SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
+A + + + + + + + + + ES +
Sbjct: 205 EEAIQRMEKGEHSIVYLKPSYAFGSVGKERFQIPPHAELRYEVRLKSFEKAKESWEMSSA 264
Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
L + + + + K L +IV + V +LA+
Sbjct: 265 EKLEQSNIVKERGTAYFKEGKYKQALLQYKKIV-SWLEYESSFSGEEMQKVHALRLASHL 323
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+ +LK + AAI L S+ E+ + R EA++A+ D AR +
Sbjct: 324 N-LAMCHLKLQAFSAAIESCNKALELDSN---NEKGLFRRGEAHLAVNDFDLARADFQKV 379
Query: 254 QERYPQGYWAR 264
+ YP A+
Sbjct: 380 LQLYPSNKAAK 390
>gi|326436616|gb|EGD82186.1| mbre TPR repeat protein [Salpingoeca sp. ATCC 50818]
Length = 707
Score = 37.1 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 14/224 (6%), Positives = 40/224 (17%), Gaps = 10/224 (4%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
+ F + + KA + + F + ++
Sbjct: 434 EEHPDTANTYVNLGLAFKNKGEYDKAIASLEKARQIFVQTLGDEHPSTAATYMNLGHAYD 493
Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
S + + + V + + +
Sbjct: 494 SSGDSSMAIAHFEKAKEIWLRTVGERHSRTADTCKHLGNAYDSIGEYARA--IECYKMAK 551
Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
+ + + + + + S +
Sbjct: 552 EAYVETRGESHPDTASVYGSLGSAYREKGEYDKAIAHLEKAKEVFTATLGSSSPATAAVS 611
Query: 231 ARLVEAYVALALMDEA--------REVVSLIQERYPQGYWARYV 266
L AY ++A + + +P A Y
Sbjct: 612 MNLGIAYSDSGDREQACAHIEHALEVFTATLGPDHPNTRQAAYS 655
>gi|301062450|ref|ZP_07203102.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2]
gi|300443450|gb|EFK07563.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2]
Length = 313
Score = 37.1 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 29/78 (37%)
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
A + + + +G+Y AI F+ + + +A + Y+ EAR+
Sbjct: 36 DATGQFDFAHSLMDKGDYSRAISEFERFIYFFPTDRRVPQARQLIGLCYLNDGKFGEARK 95
Query: 249 VVSLIQERYPQGYWARYV 266
V + P+ A+
Sbjct: 96 VFAACYRADPESPLAKKS 113
>gi|148258084|ref|YP_001242669.1| hypothetical protein BBta_6876 [Bradyrhizobium sp. BTAi1]
gi|146410257|gb|ABQ38763.1| putative exported protein of unknown function [Bradyrhizobium sp.
BTAi1]
Length = 348
Score = 37.1 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 30/73 (41%)
Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
+ + +G + +R +Y A F V + + A +A+ RL ++ AL +
Sbjct: 257 DPMIGDAKYWLGESFYQRQQYRDAAEVFLAVTTKHDKSSKAPDALLRLGQSLAALKEKEA 316
Query: 246 AREVVSLIQERYP 258
A I +YP
Sbjct: 317 ACAAFGEISRKYP 329
>gi|116623520|ref|YP_825676.1| polysaccharide deacetylase [Candidatus Solibacter usitatus
Ellin6076]
gi|116226682|gb|ABJ85391.1| polysaccharide deacetylase [Candidatus Solibacter usitatus
Ellin6076]
Length = 899
Score = 37.1 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 9/47 (19%), Positives = 17/47 (36%)
Query: 224 EHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
+EA + E Y+ + EA++ YP A ++
Sbjct: 850 PKRKEAHGNIAEVYLKMGRKPEAKQHYEEYLRLYPASPKAEEFRRIL 896
>gi|226228223|ref|YP_002762329.1| hypothetical protein GAU_2817 [Gemmatimonas aurantiaca T-27]
gi|226091414|dbj|BAH39859.1| hypothetical protein [Gemmatimonas aurantiaca T-27]
Length = 612
Score = 37.1 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 17/108 (15%), Positives = 29/108 (26%), Gaps = 3/108 (2%)
Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
++ S +A GR L Y A F+ + Y +
Sbjct: 139 FGINWSKSQRGYRTEAPEPWATQDMADSLYREGRKALSGDAYRKAADIFRSIRDRYPKSS 198
Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQE---RYPQGYWARYVETL 269
+A +A A L R + + YP+ +L
Sbjct: 199 YAPDAPYWEAFALQRLGGEANQRAALEALAYQQREYPKAATRGDASSL 246
>gi|75812660|ref|YP_320278.1| TPR repeat-containing serine/threonin protein kinase [Anabaena
variabilis ATCC 29413]
gi|75705416|gb|ABA25089.1| serine/threonine protein kinase with TPR repeats [Anabaena
variabilis ATCC 29413]
Length = 707
Score = 37.1 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 29/256 (11%), Positives = 64/256 (25%), Gaps = 22/256 (8%)
Query: 32 VCFLVGW-ERQSSRDVYLDSVTDVRYQREVY---EKAVLFLKEQNFSKAYEYFNQCSRDF 87
V LV + S + +EV+ A K N+ +A N+ +
Sbjct: 401 VLGLVNCRKSNWSEALKNLEQAANLAPQEVWIQANLAWALGKSGNWQQAENTVNKALQLD 460
Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147
A A Q + AS Q + + + ++ + +
Sbjct: 461 ANCTFALGLQAWIAVNQEQWKSGIRTASQAIFKSKQSSYTNSQELQRWVYPYLIFALDKA 520
Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPY--------------VKGARFYVTVGRNQLAAKE 193
V Q + + + + + ++ + A +
Sbjct: 521 VVTKQASDVE--RRIQEFITQVPDNSFGWGFKGWKAAVKCLWTDAISDFEQASRKSKVSS 578
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+ + + Q + + RL Y L ++AR +
Sbjct: 579 WILINQGIAQEYLHNFQAAIQAYETHTQQFSPHAFVLFRLGTLYGRLGQWEKARSYLEKA 638
Query: 254 QERYPQGYWARYVETL 269
+ +A L
Sbjct: 639 VHE--KSNYAEAYHNL 652
>gi|317484568|ref|ZP_07943474.1| tol-pal system protein YbgF [Bilophila wadsworthia 3_1_6]
gi|316924167|gb|EFV45347.1| tol-pal system protein YbgF [Bilophila wadsworthia 3_1_6]
Length = 139
Score = 37.1 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 17/121 (14%), Positives = 41/121 (33%), Gaps = 5/121 (4%)
Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE-----VEIGRYYLKRGEYVAAI 210
+ V+ + Y + + + K G + G + AA
Sbjct: 15 DIAKALYDNGVQSFNARNYKQALKSFSDFTDTYGKHKLVSNAWFWRGECNYQLGNFPAAA 74
Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
++ V++ Y + A A + ++ D A+ + + +++P+ A L+
Sbjct: 75 LDYEQVISKYGSSGKAASAYLKQGMCFIKAGKKDAAKVRLQELIKKFPKSPEATRATQLM 134
Query: 271 K 271
K
Sbjct: 135 K 135
>gi|307132466|ref|YP_003884482.1| TPR repeat protein [Dickeya dadantii 3937]
gi|306529995|gb|ADM99925.1| TPR repeat protein [Dickeya dadantii 3937]
Length = 642
Score = 37.1 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 27/223 (12%), Positives = 61/223 (27%), Gaps = 10/223 (4%)
Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
+ + + K V ++ + A + ++ F ++ +
Sbjct: 401 EGSDSPAVLKQVAMAMLNKGVRLGQQGHADSAIQNYDLLIARFKDRDELELQEQVAKAML 460
Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
K+ Q + E + LV + + + +
Sbjct: 461 NKGVKFGQQNAQDEAIQIYDQLIAQFNDHSELVFQELVIKAMLNKGVRLGKQGKQEEEIK 520
Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA- 223
I ++ V NQ+A V G + G+ AI + ++A + D+
Sbjct: 521 IYDQLIARHKDSDEP----VLLNQVAMAMVNKGISLRQHGQPEEAIKIYDQLIATFQDSE 576
Query: 224 -EHAEE----AMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
+E AM A D+A + + +
Sbjct: 577 VPTIQERVVSAMFYKGFALGKQGQTDQAVQTYDRLITTFQSSD 619
>gi|256848362|ref|ZP_05553805.1| conserved hypothetical protein [Lactobacillus coleohominis
101-4-CHN]
gi|256714960|gb|EEU29938.1| conserved hypothetical protein [Lactobacillus coleohominis
101-4-CHN]
Length = 237
Score = 37.1 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 15/101 (14%), Positives = 30/101 (29%), Gaps = 4/101 (3%)
Query: 19 LYKFALTIFFSIAVCFLVGW----ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFS 74
+ K AL+ V L G S + + + Y+KA + + +
Sbjct: 8 MSKLALSTAGVALVFGLAGCGQKNSASSDNNSTKSAKVTESAADKAYKKANDLITKGQYQ 67
Query: 75 KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
KAY+ + + + L + K +
Sbjct: 68 KAYDLLDDVEHENKKVEYLEEDLDSYLEAREDYNKGDYQEA 108
>gi|22324680|gb|AAM95632.1| FK506 binding protein 4 [Rattus norvegicus]
Length = 402
Score = 37.1 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 29/191 (15%), Positives = 61/191 (31%), Gaps = 5/191 (2%)
Query: 74 SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
+A + + + + + + + + + S ++
Sbjct: 149 EEAIQRMEKGEHSIVYLKPSYAFGSVGKERFQIPPHAELRYEVHLKSFEKAKASWEMNSE 208
Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
L + + V + + K L +IV + V +LA+
Sbjct: 209 EKLEQSNIVKERGTVYFKEGKYKQALLQYKKIV-SWLEYESSFSGEEMQKVHALRLASHL 267
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+ +LK + AAI L S+ E+ + R EA++A+ D AR +
Sbjct: 268 -NLAMCHLKLQAFSAAIESCNKALELDSN---NEKGLFRRGEAHLAVNDFDLARADFQKV 323
Query: 254 QERYPQGYWAR 264
+ YP A+
Sbjct: 324 LQLYPSNKAAK 334
>gi|302814181|ref|XP_002988775.1| hypothetical protein SELMODRAFT_128575 [Selaginella moellendorffii]
gi|300143596|gb|EFJ10286.1| hypothetical protein SELMODRAFT_128575 [Selaginella moellendorffii]
Length = 668
Score = 37.1 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 21/147 (14%), Positives = 36/147 (24%), Gaps = 3/147 (2%)
Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
+ + A + ++ +S + +
Sbjct: 311 QQYVTLAHEMEMDKALQHLHQRDFQQAIALLKEFERKERDLQARAATNLSFLYFLEGDLA 370
Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
+ + A V G Y RG+ A ++ D EA+ L
Sbjct: 371 NAEKHAELAVLNNRFNACALVNQGNCYFMRGDPERAKQVYKGAADVDPDCV---EALYNL 427
Query: 234 VEAYVALALMDEAREVVSLIQERYPQG 260
AY L +EA V I P
Sbjct: 428 GLAYKKLNSFEEALSVFKKISYVLPNN 454
>gi|238924772|ref|YP_002938288.1| hypothetical protein EUBREC_2423 [Eubacterium rectale ATCC 33656]
gi|238876447|gb|ACR76154.1| Hypothetical protein EUBREC_2423 [Eubacterium rectale ATCC 33656]
Length = 320
Score = 37.1 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 20/239 (8%), Positives = 57/239 (23%), Gaps = 14/239 (5%)
Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEK-AVLFLKEQNFS 74
+ ALT+ + L G ++ Y + + ++ ++
Sbjct: 1 MIKNKFMALTLTVVLTAGMLTGCGSGDKAK-----------DKDAYRQYGINCIENGSYD 49
Query: 75 KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
A + F + + A + + + ++ + Y
Sbjct: 50 DAVDAFQKALDQSVGSVGAEELDICYYKAKAQYLSGDVDGAIDTYTAIIDYNKDSDAYYL 109
Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
D + + + G + +
Sbjct: 110 RGCIYFAKNDSDKGLKDFKTALSENNDNYELYLGVYETLSKYGMNDQGKEYLDNALKLKA 169
Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAE--HAEEAMARLVEAYVALALMDEAREVVS 251
+ Y++RG + + + + A +A + E Y D +++
Sbjct: 170 KTADDYMQRGRIYTMLGDYDSAIKSLQKAIDEKLVKANYYMGEVYQKKGDNDSSQKYFK 228
>gi|260823344|ref|XP_002604143.1| hypothetical protein BRAFLDRAFT_208090 [Branchiostoma floridae]
gi|229289468|gb|EEN60154.1| hypothetical protein BRAFLDRAFT_208090 [Branchiostoma floridae]
Length = 819
Score = 37.1 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 24/192 (12%), Positives = 54/192 (28%), Gaps = 7/192 (3%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
KA+++LK+++F++A E + + L + + +
Sbjct: 421 NKAIMYLKQKDFNQAVETLKSFEKKDSKVASTAATNLSFLYFLENEIGQADKYAEVAMTA 480
Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPY----DQRATKLMLQYMSRIVERYTNSPYVKG 177
+Y S V+ + + R+ + L + ++
Sbjct: 481 DRYNPSALVNKGNCVFMQGEHERAREFYQEALRNDSTCTEALYNLGLTYKKIGRLEDSLD 540
Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
+ A +I Y + A F ++ +ARL E Y
Sbjct: 541 CFLKLHAILRNSAQVIYQIADLYDLLEDTAQATEWFMQLIGVVPTDAFV---LARLGEIY 597
Query: 238 VALALMDEAREV 249
+A +
Sbjct: 598 DNEGDKTQAFQY 609
>gi|154412965|ref|XP_001579514.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121913721|gb|EAY18528.1| hypothetical protein TVAG_083840 [Trichomonas vaginalis G3]
Length = 1282
Score = 37.1 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 33/235 (14%), Positives = 76/235 (32%), Gaps = 3/235 (1%)
Query: 40 RQSSRDVYLDSVTDVRYQREVYEKA-VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
Q+ ++ V + Q ++Y A ++++ + A + + A K
Sbjct: 1012 SQTEDELEAKQVALLCEQLQMYNIASKVWMRLNDHISAMKDIIRGDDPEKVIRFANKLKR 1071
Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
AF+ + +Q GE+ + Y + + + D + K
Sbjct: 1072 KDAFIMAADYLSEQNPREGEQLFITAMQFYQRAGSYDKISQFLERSAQTEIDDFQDYKKA 1131
Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
L + R + + + V ++ E+ I + + + +L
Sbjct: 1132 LDLLRRAHQTMAKTDMTRDREAIVMSQLQKIRWIEMYIEASECVQSDPMRMQCICNELLQ 1191
Query: 219 NYSDAE--HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
E+ LV+ +V L +A+ ++ +++ W VE L K
Sbjct: 1192 TRGVDICLRLEDVYMLLVQYFVELGNFTQAQRILENMRKNGVDLKWFMEVEQLKK 1246
>gi|45656229|ref|YP_000315.1| hemolysin [Leptospira interrogans serovar Copenhageni str. Fiocruz
L1-130]
gi|45599463|gb|AAS68952.1| hemolysin [Leptospira interrogans serovar Copenhageni str. Fiocruz
L1-130]
Length = 378
Score = 37.1 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 26/213 (12%), Positives = 62/213 (29%), Gaps = 17/213 (7%)
Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
+ ++ + Y L L+ + + + R + + +L A
Sbjct: 102 ELNQKEGLSRDERSKVAYSMGNLLLQLNRDEEGKGHLEEVLRISADSKLRSNALSAIADY 161
Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
G Y + + + PE+ + +
Sbjct: 162 YMKKGNYDLSRKNYVLALQEDPENVKARVRWGKSLRRMGKDWSAY--------------- 206
Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
+ + Y + + + +E R R +Y AI F+ L +
Sbjct: 207 DVYDDYAQAGFYFDPEKEKVSSEFRSG--ILEKARQLYVRKQYYGAIDTFKKALDMGVSS 264
Query: 224 EHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
+ E+A+ + E+Y A+ D A + ++ +
Sbjct: 265 KAEEQALFYIAESYEAIGKSDSALQYLNRVLGN 297
Score = 35.5 bits (79), Expect = 8.9, Method: Composition-based stats.
Identities = 18/203 (8%), Positives = 53/203 (26%), Gaps = 18/203 (8%)
Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
A ++K+ N+ + + + + K+ + GK A + ++Y
Sbjct: 159 ADYYMKKGNYDLSRKNYVLALQ---EDPENVKARVRWGKSLRRMGKDWSAYDVYDDYAQA 215
Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
S Y ++ + + ++
Sbjct: 216 GFYFDPEKEKVSSEFRSGILEKARQLYVRKQYYGAIDTFKKALDM--------------- 260
Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243
++ + + + + ++ + D + A+ R Y
Sbjct: 261 GVSSKAEEQALFYIAESYEAIGKSDSALQYLNRVLGNQDGSLDQTALFRKGTIYFKSGKY 320
Query: 244 DEAREVVSLIQERYPQGYWARYV 266
++A + ++YP R
Sbjct: 321 EKAAALFQEATDKYPDSPVGRKA 343
>gi|294785186|ref|ZP_06750474.1| membrane protein [Fusobacterium sp. 3_1_27]
gi|294486900|gb|EFG34262.1| membrane protein [Fusobacterium sp. 3_1_27]
Length = 438
Score = 37.1 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 13/76 (17%), Positives = 26/76 (34%), Gaps = 5/76 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV-----YEKAVLFLKEQNF 73
+ K+ ++F I V L + D ++ A ++KE N+
Sbjct: 1 MKKYFKSLFAFIFVFGLFISFSSMDVEAAQKKKYDTWQDVAKDMNIEFQAAKKYIKEGNY 60
Query: 74 SKAYEYFNQCSRDFPF 89
+AY N+ +
Sbjct: 61 DEAYNAMNKAYFGYYE 76
>gi|284053492|ref|ZP_06383702.1| TPR repeat-containing protein [Arthrospira platensis str. Paraca]
Length = 643
Score = 37.1 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 22/231 (9%), Positives = 49/231 (21%), Gaps = 6/231 (2%)
Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
+ ++ + + L+E+ F +A Q P L
Sbjct: 398 SASQEKLEIPQTIAEPLSDMVA--QVEANLQEKQFQQALSLCQQVLALDPETANIYALLG 455
Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM---IRDVPYDQRAT 155
+ + A + + + Q Q
Sbjct: 456 KALLGMKRLPEAVAAFQKAVQLNPEDATIHTNLGSLAARMQGWEQAIKCYERAIALQPDL 515
Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
+ + ++ + R+ + + + +
Sbjct: 516 VAAHRNLGKVWHKLGKPQQAVSCRYQALILQPEEGEVSEFLAVGNSLLQSGRLQEAEVCY 575
Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
+ H +A L E A L EA E P + +R
Sbjct: 576 -RQVVRRSPHDSQAYHNLGEVLSAQGLWSEAEAAYRRAVELQPDSFESRNS 625
>gi|148667470|gb|EDK99886.1| FK506 binding protein 4, isoform CRA_a [Mus musculus]
Length = 455
Score = 37.1 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 29/191 (15%), Positives = 60/191 (31%), Gaps = 5/191 (2%)
Query: 74 SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
+A + + + + + + + + + ES +
Sbjct: 202 EEAIQRMEKGEHSIVYLKPSYAFGSVGKERFQIPPHAELRYEVRLKSFEKAKESWEMSSA 261
Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
L + + + + K L +IV + V +LA+
Sbjct: 262 EKLEQSNIVKERGTAYFKEGKYKQALLQYKKIV-SWLEYESSFSGEEMQKVHALRLASHL 320
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+ +LK + AAI L S+ E+ + R EA++A+ D AR +
Sbjct: 321 N-LAMCHLKLQAFSAAIESCNKALELDSN---NEKGLFRRGEAHLAVNDFDLARADFQKV 376
Query: 254 QERYPQGYWAR 264
+ YP A+
Sbjct: 377 LQLYPSNKAAK 387
>gi|114562641|ref|YP_750154.1| hypothetical protein Sfri_1464 [Shewanella frigidimarina NCIMB 400]
gi|114333934|gb|ABI71316.1| conserved hypothetical protein [Shewanella frigidimarina NCIMB 400]
Length = 245
Score = 37.1 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
LK +Y AIP F+ ++ Y D+ +A A L + + ++A++ S
Sbjct: 126 YEAAVNLVLKERKYDEAIPAFRSFISTYPDSNYAANANYWLGQLLYNKSEYNDAKQAFST 185
Query: 253 IQERYPQGYWARYVETLVK 271
+ ++ + ++LVK
Sbjct: 186 VVSKFADSN--KRGDSLVK 202
>gi|261332210|emb|CBH15204.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
DAL972]
Length = 932
Score = 37.1 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 25/213 (11%), Positives = 52/213 (24%), Gaps = 13/213 (6%)
Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL-------LMSAFVQYS 106
+ Y+ A F++ ++A + F + P + +
Sbjct: 518 ESFPDVWYDAASYFVRIGETTRAEQCFREAISHDPTHAPSLMAYGALLLTFDRFDEATVY 577
Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
A + +Q A + L + + +
Sbjct: 578 LQAAVDAKPSSLSWGLISLLCDMHVLNLERGPRYESQRAHWEHEGTIAMREALSFSTDVD 637
Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY-VAAIPRFQLVLANYSDA-- 223
+ G ++ G + A ++ L +
Sbjct: 638 HTSVSKEVADYLLKLQHPGLANISLTRCSRGGHTEVLYARLFALGEQYNEALETLKNGEG 697
Query: 224 --EHAEEAMARLVEAYVALALMDEA-REVVSLI 253
+ EE + Y AL DEA RE S++
Sbjct: 698 LEPYIEEVTILRGDCYAALGRSDEAIREYKSVL 730
>gi|300023925|ref|YP_003756536.1| tol-pal system protein YbgF [Hyphomicrobium denitrificans ATCC
51888]
gi|299525746|gb|ADJ24215.1| tol-pal system protein YbgF [Hyphomicrobium denitrificans ATCC
51888]
Length = 333
Score = 37.1 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 33/78 (42%)
Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
+++YE+A +L ++++ A F + + FP ++ + + G+Y+ AA
Sbjct: 206 NDPKQLYEQAYGYLLQRDYGAAETSFTEFLKKFPNDSLSGNAQYWLGETHFVRGQYKAAA 265
Query: 115 SLGEEYITQYPESKNVDY 132
S + Y +
Sbjct: 266 SAFLKGYQTYAQGAKAPD 283
Score = 36.3 bits (81), Expect = 4.0, Method: Composition-based stats.
Identities = 17/98 (17%), Positives = 35/98 (35%), Gaps = 1/98 (1%)
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI-GRYYLKRGEYVAAIPRFQLVLANY 220
+++R + F + L+ G + RG+Y AA F Y
Sbjct: 216 YGYLLQRDYGAAETSFTEFLKKFPNDSLSGNAQYWLGETHFVRGQYKAAASAFLKGYQTY 275
Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
+ A +++ +L + L D A + + ++P
Sbjct: 276 AQGAKAPDSLLKLAMSLDRLGQKDAACSSFAELATKFP 313
>gi|221487536|gb|EEE25768.1| TPR domain-containing protein, putative [Toxoplasma gondii GT1]
Length = 462
Score = 37.1 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 9/46 (19%), Positives = 21/46 (45%)
Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
E+A+ R+ +A+ L +A + + + E P A + ++
Sbjct: 113 NEKALLRMAKAHSELQEYSKAEQALRRLLELRPDNQEATRLYRQIR 158
>gi|154494824|ref|ZP_02033829.1| hypothetical protein PARMER_03866 [Parabacteroides merdae ATCC
43184]
gi|154085374|gb|EDN84419.1| hypothetical protein PARMER_03866 [Parabacteroides merdae ATCC
43184]
Length = 597
Score = 37.1 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 27/203 (13%), Positives = 53/203 (26%), Gaps = 8/203 (3%)
Query: 68 LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127
+ + A N + A Y Q A +E
Sbjct: 324 FQGNVYQFASGLGNPFEKYAKCDYRVIPFHTTDAKGGYEGFFLQGAQMKYDESKQYGFTD 383
Query: 128 KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
+NV+ +G + + + + + +++ Y V +
Sbjct: 384 ENVNGSEEWMGFPLVFVDQVGRFSEDKSLNAENKKQALLDAAARGGYFICNDADVIAKGS 443
Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE--EAMARLVEAYVALALMDE 245
Q+ E G + K F+ E L E Y +
Sbjct: 444 QVTTGEENSGFRFNKFPYLPDHDGLFRS-----QSTPEMRLSEMYYSLAECYYREGNKAK 498
Query: 246 AREVVSLIQ-ERYPQGYWARYVE 267
A E++ ++ YP W++Y
Sbjct: 499 AAELLDYVRVRNYPAEEWSKYSY 521
>gi|60653315|gb|AAX29352.1| FK506 binding protein 4 [synthetic construct]
gi|60825929|gb|AAX36740.1| FK506 binding protein 4 [synthetic construct]
Length = 460
Score = 37.1 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 25/233 (10%), Positives = 69/233 (29%), Gaps = 14/233 (6%)
Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQN---------FSKAYEYFNQCSRDFPFAG 91
+ + ++ + Y+ +++++ L + +A + + +
Sbjct: 163 KPNEGAIVEVALEGYYKDKLFDQRELRFEIGEGENLDLPYGLERAIQRMEKGEHSIVYLK 222
Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151
+ + + L + + ES ++ L + + V +
Sbjct: 223 PSYAFGSVGKEKFQIPPNAELKYELHLKSFEKAKESWEMNSEEKLEQSTIVKERGTVYFK 282
Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
+ K L +IV + F + A + + + A
Sbjct: 283 EGKYKQALLQYKKIVSWLEY-----ESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSA 337
Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
+ + E+ + R EA++A+ + AR + + YP A+
Sbjct: 338 AIESCNKALELDSNNEKGLFRRGEAHLAVNDFELARADFQKVLQLYPNNKAAK 390
>gi|71746874|ref|XP_822492.1| hypothetical protein [Trypanosoma brucei TREU927]
gi|70832160|gb|EAN77664.1| hypothetical protein, conserved [Trypanosoma brucei]
Length = 1057
Score = 37.1 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 25/213 (11%), Positives = 52/213 (24%), Gaps = 13/213 (6%)
Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL-------LMSAFVQYS 106
+ Y+ A F++ ++A + F + P + +
Sbjct: 643 ESFPDVWYDAASYFVRIGETTRAEQCFREAISHDPTHAPSLMAYGALLLTFDRFDEATVY 702
Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
A + +Q A + L + + +
Sbjct: 703 LQAAVDAKPSSLSWGLISLLCDMHVLNLERGPRYESQRAHWEHEGTIAMREALSFSTDVD 762
Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY-VAAIPRFQLVLANYSDA-- 223
+ G ++ G + A ++ L +
Sbjct: 763 HTSVSKEVADYLLKLQHPGLANISLTRCSRGGHTEVLYARLFALGEQYNEALETLKNGEG 822
Query: 224 --EHAEEAMARLVEAYVALALMDEA-REVVSLI 253
+ EE + Y AL DEA RE S++
Sbjct: 823 LEPYIEEVTILRGDCYAALGRSDEAIREYKSVL 855
>gi|113476172|ref|YP_722233.1| hypothetical protein Tery_2560 [Trichodesmium erythraeum IMS101]
gi|110167220|gb|ABG51760.1| Tetratricopeptide TPR_2 [Trichodesmium erythraeum IMS101]
Length = 309
Score = 37.1 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 30/244 (12%), Positives = 70/244 (28%), Gaps = 10/244 (4%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
LY+F +I + V FL S + + ++V+ + + + +N+ +A E
Sbjct: 4 LYRFLFSIIIVVTVLFL----SFSPPMKIATANLKIGNAKKVFTEGITNSENKNYEQAVE 59
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQ-YSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
F + A + + + + N+ Y +
Sbjct: 60 NFTKAIELKFKFASAYSNRCLVYLQWGKYEEAIADCTEAIKINPKNIEANLNLGLAYDKI 119
Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
G + +R + + Y + Y + N + G
Sbjct: 120 GNYQQAIAEYNQVLNHQHNDFRALYNRGLANFELKNYHEAIENYNLILTNIQQDASLNQG 179
Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAE----EAMARLVEAYVALALMDEA-REVVSL 252
Y +RG +A+++ A + + A + ++ A +
Sbjct: 180 DIYNERGLAYLMSKNTHKAMADFNYAIYIDADNSRAYYNRGCVCRKMGNIEGAMADFSKS 239
Query: 253 IQER 256
+Q
Sbjct: 240 LQIN 243
>gi|301063961|ref|ZP_07204427.1| conserved hypothetical protein [delta proteobacterium NaphS2]
gi|300441932|gb|EFK06231.1| conserved hypothetical protein [delta proteobacterium NaphS2]
Length = 227
Score = 37.1 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 21/165 (12%), Positives = 40/165 (24%), Gaps = 6/165 (3%)
Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
Y + E+ Y + + V D +K + +
Sbjct: 56 YMKHTNTKGQEAYNTAYNTLIETAQSTKDYGEGVVKSEALFEAVISDYSMSKAADLALPQ 115
Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA------ 218
+ + A Y + A E L A +
Sbjct: 116 VGHAKFATGMYDDAIVYYDEFSPKAAHNEAYETLNQLALAACREAEGEMKKAAEILKRIV 175
Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
+ E AM L Y A ++A+E++ + Y +
Sbjct: 176 ERPENPFRETAMLNLERIYRADNDPEKAKEILKSFAKEYANSPFY 220
>gi|254525686|ref|ZP_05137738.1| hypothetical protein P9202_335 [Prochlorococcus marinus str. MIT
9202]
gi|221537110|gb|EEE39563.1| hypothetical protein P9202_335 [Prochlorococcus marinus str. MIT
9202]
Length = 262
Score = 37.1 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 25/256 (9%), Positives = 64/256 (25%), Gaps = 16/256 (6%)
Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
+L L IF + ++ S + +++ A+ F+
Sbjct: 4 FKKLKVCFLLIFIFLNSFYIAPCYSLSLK-------------EHLFKNALDLSSGGKFNL 50
Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
A + +NQ +P A + V + + +
Sbjct: 51 ALQEWNQYLDSYPDDAAALSNRGNVRLVIGDVKGSIDDQNKAISLNPSEIDPYINRGIAE 110
Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK---GARFYVTVGRNQLAAK 192
++Q +D + + ++ + + A
Sbjct: 111 EALGQWSQAKKDYMLVISQDSKNFSALYNLANVEGSTSHWDKARDLFAKAALYNPGFAMA 170
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ + G + + ++ Y A A+ L + + V+
Sbjct: 171 RSSLALADFQLGNIDKSEKELKNLIRRYPTFADARAALTALNWSKGEAGKAESNWIAVTE 230
Query: 253 IQERYPQGYWARYVET 268
+ RY W + +
Sbjct: 231 LDPRYSDEEWLKKIRR 246
>gi|260829275|ref|XP_002609587.1| hypothetical protein BRAFLDRAFT_87801 [Branchiostoma floridae]
gi|229294949|gb|EEN65597.1| hypothetical protein BRAFLDRAFT_87801 [Branchiostoma floridae]
Length = 738
Score = 37.1 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 22/208 (10%), Positives = 54/208 (25%), Gaps = 11/208 (5%)
Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
+Y L + +S+A E + + R P + M + + +A +
Sbjct: 514 AIYNLGRLQHDQGRYSEAIETYMEAIRRRPSHYAPQSLYNMLGESLFKNSQLAEAEEWFK 573
Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK------LMLQYMSRIVERYTNS 172
+ + P+ Y + + Q+A + + Q+ + + S
Sbjct: 574 KSLAAKPDHVPAHLTYAKLMAKTNRAAEAELMYQKAMELDSNSATVHQHYGQYMAETGRS 633
Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232
+ + G + A ++ + A
Sbjct: 634 EEAADMMVKAVELGSPEFETIFNAANALRQAGRHEDAEKYYKQATQLKPE---VASAHMN 690
Query: 233 LVEAYVALALMDEARE-VVSLIQERYPQ 259
L EA + ++ + P
Sbjct: 691 LGAILHLNGKYVEAETSYLRALELK-PD 717
>gi|188994836|ref|YP_001929088.1| TPR domain protein [Porphyromonas gingivalis ATCC 33277]
gi|188594516|dbj|BAG33491.1| TPR domain protein [Porphyromonas gingivalis ATCC 33277]
Length = 818
Score = 37.1 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 24/213 (11%), Positives = 60/213 (28%), Gaps = 8/213 (3%)
Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99
+++ +D D ++ Y++ + ++ ++ +A + F++ A S +
Sbjct: 110 KKAIKDYSQAIELDDKFAHAYYDRGNAYCEKGSYEEAIKDFSKAIELNDKYTYAYHSRGI 169
Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
Y + A + Y + + D +
Sbjct: 170 ----AYCEKGSYKEAIKDYSQAIELDGKFVHAYHGRGIAYFKKGSYEEAIKDYSQAIELD 225
Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219
+ + KG ++ + + Y RG ++ + +
Sbjct: 226 GKFVHAYHGRGIAYFKKGLYEEAIKDYSKAIELDGKFAHAYYDRGNAYCEKGSYEEAIKD 285
Query: 220 YSDAEHAE----EAMARLVEAYVALALMDEARE 248
YS A + A AY +EA +
Sbjct: 286 YSKAIELDGKFAHAYHNRGNAYCEKGSYEEAIK 318
>gi|118369961|ref|XP_001018183.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89299950|gb|EAR97938.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 3418
Score = 37.1 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 27/208 (12%), Positives = 64/208 (30%), Gaps = 6/208 (2%)
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
Y+ A + + ++F++A + +C + A+ L + K A +
Sbjct: 1743 YQYAKILFETKDFNQAIIFAQECIKINSSLDNAQNLLGLCYMNIGDMNKAIAAFKKQGQI 1802
Query: 121 ITQYPESKNV---DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
+ + Y+ + + + + ++ + +
Sbjct: 1803 NRLHKDYLLNLGKAYIKKGQTVDAISTLSKFMNLYPDIEETYELLNYLFDLQQQPKKQIK 1862
Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
+ + + I K+ Y AI ++ L + + R+ Y
Sbjct: 1863 ILQNLLEKYPKKTKLNLNIADIQYKQKLYQEAIESYEKYLKENEGSREIQ---YRVAMCY 1919
Query: 238 VALALMDEAREVVSLIQERYPQGYWARY 265
V L+ EA E+++ YP RY
Sbjct: 1920 VRKNLLKEANEILNKSIALYPDMIEYRY 1947
>gi|4503729|ref|NP_002005.1| peptidyl-prolyl cis-trans isomerase FKBP4 [Homo sapiens]
gi|399866|sp|Q02790|FKBP4_HUMAN RecName: Full=Peptidyl-prolyl cis-trans isomerase FKBP4;
Short=PPIase FKBP4; AltName: Full=51 kDa FK506-binding
protein; Short=FKBP51; AltName: Full=52 kDa
FK506-binding protein; Short=52 kDa FKBP; Short=FKBP-52;
AltName: Full=59 kDa immunophilin; Short=p59; AltName:
Full=FK506-binding protein 4; Short=FKBP-4; AltName:
Full=FKBP59; AltName: Full=HSP-binding immunophilin;
Short=HBI; AltName: Full=Immunophilin FKBP52; AltName:
Full=Rotamase; Contains: RecName: Full=Peptidyl-prolyl
cis-trans isomerase FKBP4, N-terminally processed
gi|186390|gb|AAA36111.1| immunophilin [Homo sapiens]
gi|12804711|gb|AAH01786.1| FK506 binding protein 4, 59kDa [Homo sapiens]
gi|14043983|gb|AAH07924.1| FK506 binding protein 4, 59kDa [Homo sapiens]
gi|60656373|gb|AAX32750.1| FK506 binding protein 4 [synthetic construct]
gi|60814184|gb|AAX36290.1| FK506 binding protein 4 [synthetic construct]
gi|119609295|gb|EAW88889.1| FK506 binding protein 4, 59kDa, isoform CRA_a [Homo sapiens]
gi|119609296|gb|EAW88890.1| FK506 binding protein 4, 59kDa, isoform CRA_a [Homo sapiens]
gi|123993985|gb|ABM84594.1| FK506 binding protein 4, 59kDa [synthetic construct]
gi|123998249|gb|ABM86726.1| FK506 binding protein 4, 59kDa [synthetic construct]
gi|168277778|dbj|BAG10867.1| FK506 binding protein 4 [synthetic construct]
Length = 459
Score = 37.1 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 25/233 (10%), Positives = 69/233 (29%), Gaps = 14/233 (6%)
Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQN---------FSKAYEYFNQCSRDFPFAG 91
+ + ++ + Y+ +++++ L + +A + + +
Sbjct: 163 KPNEGAIVEVALEGYYKDKLFDQRELRFEIGEGENLDLPYGLERAIQRMEKGEHSIVYLK 222
Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151
+ + + L + + ES ++ L + + V +
Sbjct: 223 PSYAFGSVGKEKFQIPPNAELKYELHLKSFEKAKESWEMNSEEKLEQSTIVKERGTVYFK 282
Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
+ K L +IV + F + A + + + A
Sbjct: 283 EGKYKQALLQYKKIVSWLEY-----ESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSA 337
Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
+ + E+ + R EA++A+ + AR + + YP A+
Sbjct: 338 AIESCNKALELDSNNEKGLFRRGEAHLAVNDFELARADFQKVLQLYPNNKAAK 390
>gi|67921401|ref|ZP_00514919.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501]
gi|67856513|gb|EAM51754.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501]
Length = 306
Score = 37.1 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 26/247 (10%), Positives = 64/247 (25%), Gaps = 7/247 (2%)
Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
+KF++ I + S S ++E Y++A++ + K+
Sbjct: 7 NFFKFSILIAAMLFCLGFSSPSVGKSTISPNFSQGIDYLRQEKYQEAIVQFTQVINDKSQ 66
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
S + + + + E Y+ + ++ + +
Sbjct: 67 WMAFAYSNRCLAHLQLNNNQAAKRDCEKALEMN---SDNMEAYLNKGLADYRMENYHQSL 123
Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
+ R + L + + + Y + +
Sbjct: 124 AAYQEVIKRQKGDYRAYYNQGLVHFQLGNYQQALNSYDQALEIDQDYSLEHKTLIYHDRA 183
Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA-REVVSLIQER 256
+LK ++ AI +L E+A + AY A ++ +I
Sbjct: 184 LAHLKLEDFSRAIANLTHLLILNPK---NEQAYYQRGYAYQKSGDHKAAFQDFTEVITLN 240
Query: 257 YPQGYWA 263
Sbjct: 241 PQSTNAY 247
>gi|326432845|gb|EGD78415.1| hypothetical protein PTSG_09111 [Salpingoeca sp. ATCC 50818]
Length = 824
Score = 37.1 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 21/231 (9%), Positives = 56/231 (24%), Gaps = 14/231 (6%)
Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF--PFAGVARKSL 97
+ V + + + ++ + + KA E+F F + +
Sbjct: 342 KAKDNRVEVLGEKHAGTAQVLNNLGNVYDSKGEYDKAIEHFEAARATFAEAQGEMHPDTA 401
Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
+ + + + T + + + D+
Sbjct: 402 STCSNLGKAYSSKGDYDKAIAYHETAKEIQLTLRGDKHPTTAESFNNLGSAYLDKGEYDK 461
Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
+ Y R Y + + N A ++ A + + V
Sbjct: 462 AIDYFHRARAVYVETLGRM-HQSTAHTCHNLGVAYRIKGESEKAMGWYEEAKEIKMRTVG 520
Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL--------IQERYPQG 260
++ A+ Y + D+A + + E++P
Sbjct: 521 ETHASTAQTWNAL---GAIYNSNGEHDKALAYHKMANRIYTEALGEKHPDT 568
Score = 35.5 bits (79), Expect = 8.6, Method: Composition-based stats.
Identities = 24/225 (10%), Positives = 57/225 (25%), Gaps = 24/225 (10%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF--AGVARKSLLMSAFVQYSAG 108
+L + + KA +YF++ + + + + + +
Sbjct: 437 DKHPTTAESFNNLGSAYLDKGEYDKAIDYFHRARAVYVETLGRMHQSTAHTCHNLGVAYR 496
Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
++ Y + + + L +
Sbjct: 497 IKGESEKAMGWYEEAKEIKMRTVGETHASTAQTWNALGAIYNSNGEHDKALA-----YHK 551
Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA----- 223
N Y + + A +G Y +G+Y +I ++ A Y +
Sbjct: 552 MANRIYTE----ALGEKHPDTADTYGSLGNVYSSKGQYDKSIELYEKARAIYVETLGPVH 607
Query: 224 EHAEEAMARLVEAYVALALMDEAREVVS--------LIQERYPQG 260
E L A+ + + +A E + E +P
Sbjct: 608 PRTAEIQNSLGIAHSSNGEVTKAIEAFEKAREIGVATLGEEHPST 652
>gi|302809168|ref|XP_002986277.1| hypothetical protein SELMODRAFT_123922 [Selaginella moellendorffii]
gi|300145813|gb|EFJ12486.1| hypothetical protein SELMODRAFT_123922 [Selaginella moellendorffii]
Length = 668
Score = 37.1 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 21/147 (14%), Positives = 36/147 (24%), Gaps = 3/147 (2%)
Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
+ + A + ++ +S + +
Sbjct: 311 QQYVTLAHEMEMDKALQHLHQRDFQQAIALLKEFERKERDLQARAATNLSFLYFLEGDLA 370
Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
+ + A V G Y RG+ A ++ D EA+ L
Sbjct: 371 NAEKHAELAVLNNRFNACALVNQGNCYFMRGDPERAKQVYKGAADVDPDCV---EALYNL 427
Query: 234 VEAYVALALMDEAREVVSLIQERYPQG 260
AY L +EA V I P
Sbjct: 428 GLAYKKLNSFEEALSVFKKISYVLPNN 454
>gi|294827634|ref|NP_710559.2| TPR-repeat-containing protein [Leptospira interrogans serovar Lai
str. 56601]
gi|293385477|gb|AAN47577.2| TPR-repeat-containing protein [Leptospira interrogans serovar Lai
str. 56601]
Length = 378
Score = 37.1 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 26/213 (12%), Positives = 62/213 (29%), Gaps = 17/213 (7%)
Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
+ ++ + Y L L+ + + + R + + +L A
Sbjct: 102 ELNQKEGLSRDERSKVAYSMGNLLLQLNRDEEGKGHLEEVLRISADSKLRSNALSAIADY 161
Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
G Y + + + PE+ + +
Sbjct: 162 YMKKGNYDLSRKNYVLALQEDPENVKARVRWGKSLRRMGKDWSAY--------------- 206
Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
+ + Y + + + +E R R +Y AI F+ L +
Sbjct: 207 DVYDDYAQAGFYFDPEKEKVSSEFRSG--ILEKARQLYVRKQYYGAIDTFKKALDMGVSS 264
Query: 224 EHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
+ E+A+ + E+Y A+ D A + ++ +
Sbjct: 265 KAEEQALFYIAESYEAIGKSDSALQYLNRVLGN 297
Score = 35.2 bits (78), Expect = 9.9, Method: Composition-based stats.
Identities = 18/203 (8%), Positives = 52/203 (25%), Gaps = 18/203 (8%)
Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
A ++K+ N+ + + + K+ + GK A + ++Y
Sbjct: 159 ADYYMKKGNYDLSRKNYVLAL---QEDPENVKARVRWGKSLRRMGKDWSAYDVYDDYAQA 215
Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
S Y ++ + + ++
Sbjct: 216 GFYFDPEKEKVSSEFRSGILEKARQLYVRKQYYGAIDTFKKALDM--------------- 260
Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243
++ + + + + ++ + D + A+ R Y
Sbjct: 261 GVSSKAEEQALFYIAESYEAIGKSDSALQYLNRVLGNQDGSLDQTALFRKGTIYFKSGKY 320
Query: 244 DEAREVVSLIQERYPQGYWARYV 266
++A + ++YP R
Sbjct: 321 EKAAALFQEATDKYPDSPVGRKA 343
>gi|289551322|ref|YP_003472226.1| Methionine ABC transporter substrate-binding protein
[Staphylococcus lugdunensis HKU09-01]
gi|315658829|ref|ZP_07911696.1| ABC superfamily ATP binding cassette transporter, binding protein
[Staphylococcus lugdunensis M23590]
gi|289180854|gb|ADC88099.1| Methionine ABC transporter substrate-binding protein
[Staphylococcus lugdunensis HKU09-01]
gi|315495953|gb|EFU84281.1| ABC superfamily ATP binding cassette transporter, binding protein
[Staphylococcus lugdunensis M23590]
Length = 270
Score = 37.1 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 10/70 (14%), Positives = 22/70 (31%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K + + L + S D + E+ EKA L+++ + +
Sbjct: 1 MKKILTLVAVFVLTIALAACGKGDSEDKTIKVGASPAPHAEILEKAKPLLEKKGYDLKIQ 60
Query: 79 YFNQCSRDFP 88
N +
Sbjct: 61 SINDYTTPNK 70
>gi|255656099|ref|ZP_05401508.1| putative multiprotein-complex assembly protein [Clostridium
difficile QCD-23m63]
gi|296450470|ref|ZP_06892226.1| probable multiprotein-complex assembly protein [Clostridium
difficile NAP08]
gi|296879406|ref|ZP_06903400.1| probable multiprotein-complex assembly protein [Clostridium
difficile NAP07]
gi|296260731|gb|EFH07570.1| probable multiprotein-complex assembly protein [Clostridium
difficile NAP08]
gi|296429552|gb|EFH15405.1| probable multiprotein-complex assembly protein [Clostridium
difficile NAP07]
Length = 623
Score = 37.1 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 20/231 (8%), Positives = 58/231 (25%), Gaps = 21/231 (9%)
Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
Y + A ++ +E+++ A +Y+ + + L
Sbjct: 291 EKAKTYYKMAAEDDITEAKNNLAGIYFEEKDYENAIKYYEDAIAVGCKSSLENLGDLYYQ 350
Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK----- 156
+ + D +S+ + + + + +
Sbjct: 351 NQDIEKAISYYSRIPNNVSCQIKLGNIYEDLNNVEEAISWYKKASENGDTRSSYRLGCIY 410
Query: 157 -------LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
+Y + + + R Y G+ + A +
Sbjct: 411 ESLGNTKNARKYFEMASSKNHMNARIHLGRIYFREGKLEEAKMMFDTPANENNVYAQHMV 470
Query: 210 IPRFQLVLANYSDAEHAE---------EAMARLVEAYVALALMDEAREVVS 251
+ + +Y +++ E++ L + Y+ L EA +
Sbjct: 471 GLIYDMFYKDYVNSKFWYEKARAQGCVESIYNLGQIYLKLNDDAEAEKYYK 521
>gi|149369276|ref|ZP_01889128.1| gliding motility-related protein; TPR repeat-containing protein
[unidentified eubacterium SCB49]
gi|149356703|gb|EDM45258.1| gliding motility-related protein; TPR repeat-containing protein
[unidentified eubacterium SCB49]
Length = 892
Score = 37.1 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 30/245 (12%), Positives = 67/245 (27%), Gaps = 7/245 (2%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ IFF++ V L R+ + + +Y V + S A
Sbjct: 1 MKHLYKLIFFALTVILLAACSRKKDSFINRNYHAVTGEFNALYNGGV-AFDKGKESLAQT 59
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
Y + P + K ++ + + Q +
Sbjct: 60 YNDNFWEVLPIERMETKDEIVLPGESKDPNFNRAEEKAVKMI--QKHGMYIDGKEHNPQV 117
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
++ Y + L + I++RY S + A+ + +L +EV I
Sbjct: 118 DEAYLLLGKTRYFDQRFIPALDAFNFILDRYPTSNNINKAKVWKAKTNIRLKNEEVAIKN 177
Query: 199 YYLKRGEYVAAIPRFQL----VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
+ Y + EA+ + +A + + + +
Sbjct: 178 LKKMLEAEEIDDEDLSEASASIAEAYLQMDSIPEALPYVKDASNFVKDKELKGRYLFIKG 237
Query: 255 ERYPQ 259
+ Y +
Sbjct: 238 QLYNK 242
>gi|302338333|ref|YP_003803539.1| peptidase S1 and S6 chymotrypsin/Hap [Spirochaeta smaragdinae DSM
11293]
gi|301635518|gb|ADK80945.1| peptidase S1 and S6 chymotrypsin/Hap [Spirochaeta smaragdinae DSM
11293]
Length = 604
Score = 37.1 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 8/84 (9%), Positives = 22/84 (26%), Gaps = 5/84 (5%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
+ ++ IF ++ +G +++V Y+ + + + +
Sbjct: 7 KRASVLIFLFVSTITYIGCSSGPKLRGESKPLSEVS-----YQGIEDAFEAGRYEEVIQE 61
Query: 80 FNQCSRDFPFAGVARKSLLMSAFV 103
KSL
Sbjct: 62 VQLLDPASQPQEGEHKSLDWFFMQ 85
>gi|206561549|ref|YP_002232314.1| hypothetical protein BCAL3205 [Burkholderia cenocepacia J2315]
gi|198037591|emb|CAR53529.1| putative exported protein [Burkholderia cenocepacia J2315]
Length = 249
Score = 37.1 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 14/125 (11%), Positives = 39/125 (31%), Gaps = 14/125 (11%)
Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
+ K + +Y SPY A+++ G +Y
Sbjct: 136 QQQFRNGNFKAAAASFRAFIAKYPQSPYQPTAQYW--------------YGNAQYALRDY 181
Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
+ +Q +++ + A +A+ + + A++ + +Y A+
Sbjct: 182 RGSTATWQGIVSKFPQHPRAADALVAIGTNQLEQGQKAAAKKTFEQVVSQYAGSNAAQTA 241
Query: 267 ETLVK 271
+ ++
Sbjct: 242 QGKLE 246
Score = 36.3 bits (81), Expect = 4.3, Method: Composition-based stats.
Identities = 17/111 (15%), Positives = 32/111 (28%)
Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
+ +Y + R + V + + + G + AA F+
Sbjct: 94 RQQKEYYQDLDTRLKKFEPQQATIDGVEGTVQPGETDALSAAQQQFRNGNFKAAAASFRA 153
Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
+A Y + + A A AL + I ++PQ A
Sbjct: 154 FIAKYPQSPYQPTAQYWYGNAQYALRDYRGSTATWQGIVSKFPQHPRAADA 204
>gi|197117672|ref|YP_002138099.1| type II secretion system secretin lipoprotein PulQ [Geobacter
bemidjiensis Bem]
gi|197087032|gb|ACH38303.1| type II secretion system secretin lipoprotein PulQ [Geobacter
bemidjiensis Bem]
Length = 868
Score = 37.1 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 22/222 (9%), Positives = 56/222 (25%), Gaps = 22/222 (9%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+++ L + + L G R + KA +E N A
Sbjct: 1 MHRPRLILTVMLVALALSGCTSG----------------RTAFSKAEKLEREGNLDAALV 44
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+ + + P + E + + + ++
Sbjct: 45 KYAEVAAANPD----IGEYRVKLLNVTETAARAHFKKGEEFFAKKNYDEALREFQSAYAM 100
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
+ ++ + Y+ ++ N + + + KEV+ G
Sbjct: 101 DPTHVLAKNQADQVLKLRNAQTYLQEGLDFEKNRKPREAMIAFKHALEFDPSNKEVKEGL 160
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
+ + + +N +A +L E + L
Sbjct: 161 DRIIANKRQKLDGFELNLKSNKPITLKFRDA--KLKEIFTIL 200
>gi|269925347|ref|YP_003321970.1| TPR repeat-containing protein [Thermobaculum terrenum ATCC BAA-798]
gi|269789007|gb|ACZ41148.1| TPR repeat-containing protein [Thermobaculum terrenum ATCC BAA-798]
Length = 322
Score = 37.1 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 35/226 (15%), Positives = 60/226 (26%), Gaps = 5/226 (2%)
Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
S D + + E F +A F Q P R L
Sbjct: 14 NTDSGEVTIFDLRDGESRAKRLIRAGRRHTDEGRFEEAARAFEQAVEISPKKAEYRVELA 73
Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
A+ + E + + +++ V A
Sbjct: 74 A-AYRNLIESGVVSEPEMVEALLERAYSHLMEAVRLDPEYAPSYRLLGYVYEAMDAPWRA 132
Query: 159 LQYMSRIVERYTNSPYVKGAR-FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
+ + +E N PY R + R Q E Y + G+ A+ +L
Sbjct: 133 KEMWNFYLEMDPNGPYSSEVRSALEELDRVQNLHYMFEEASYLVNHGDPERALEILSEIL 192
Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
D EA A + ++ +A E + E P+ +A
Sbjct: 193 EEEPD---WYEAWFWRGLACREMEMISDAIESFARAVELDPESTYA 235
>gi|237756528|ref|ZP_04585056.1| tol-pal system protein YbgF [Sulfurihydrogenibium yellowstonense
SS-5]
gi|237691314|gb|EEP60394.1| tol-pal system protein YbgF [Sulfurihydrogenibium yellowstonense
SS-5]
Length = 136
Score = 37.1 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 16/136 (11%), Positives = 45/136 (33%), Gaps = 9/136 (6%)
Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
Y + + + + +++Y +S A F+ +
Sbjct: 7 PQNDKQLYQYALDLYFRGNIEESRKAFTEFLKKYPDSDLYGNAIFWAGQTFYAEKKYKDA 66
Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
I + + + + Y D M +L AY+ L +++ ++ + + +
Sbjct: 67 IDIWEIFLKKCDEGKIKKC---IKYPDT------MLKLGYAYIELGNVEKGKQYLQDLIK 117
Query: 256 RYPQGYWARYVETLVK 271
+YP A + + ++
Sbjct: 118 KYPDSEPASFAKKKLE 133
>gi|209522682|ref|ZP_03271240.1| TPR repeat-containing protein [Arthrospira maxima CS-328]
gi|209496731|gb|EDZ97028.1| TPR repeat-containing protein [Arthrospira maxima CS-328]
Length = 1103
Score = 37.1 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 20/203 (9%), Positives = 48/203 (23%), Gaps = 8/203 (3%)
Query: 63 KAVLFLKEQNFSKAYEYFNQ-CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
+ +F ++ + E + + D A V + Q +
Sbjct: 12 QGQVFFSRGDYPASIEAYMKALELDIKNADVYIMLAESYIYNQEIDAAISALEKALKLQP 71
Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVP--YDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
V + + + + + + +
Sbjct: 72 DLAGAYMRVGNALQMCNCLDLAIWAYTQGLEIEPNYSIAYSNLGGVYYQQQRWHEAINCY 131
Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
LA +G +K G+ AI +Q + + +L EA
Sbjct: 132 QKCLGIDPDLAIVHWMLGNALIKSGDMAGAITCYQRAINLQD----RPDFYRKLAEALEK 187
Query: 240 LALMDEA-REVVSLIQERYPQGY 261
++EA + ++
Sbjct: 188 NGQINEAIANYKTALKLDANNSD 210
>gi|218248948|ref|YP_002374319.1| tetratricopeptide repeat-containing protein [Cyanothece sp. PCC
8801]
gi|218169426|gb|ACK68163.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 8801]
Length = 363
Score = 37.1 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 25/214 (11%), Positives = 62/214 (28%), Gaps = 9/214 (4%)
Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPF-AGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
V+ L++ ++ A E + + P + + Q + + +
Sbjct: 151 GVVLLRQNDYQGAAEAYKRVIALDPNNSEAFAIMGSSLIQQKELDKAIQYLNNAVKRFPN 210
Query: 123 QYPESKNVDYVYYLVGMSY--AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
+ + + ++ + + RI+E+
Sbjct: 211 DLELRLLLATAFLEQDNNELAFNQLKSAERISPGNPKVQLKIGRILEQQNKLDDALKTYQ 270
Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
+T +GR L +Y+ A+ ++ + + + E L AY
Sbjct: 271 RITYLSPSSTEARAGVGRIQLATKDYLGAVITYRELASMLPETP---EPYYYLGLAYKER 327
Query: 241 ALMDEAREVVSLIQERYP---QGYWARYVETLVK 271
EA + + ++ Y V+ L+K
Sbjct: 328 GRKKEATKALEQARQLYQKQDNNKGIEEVDKLLK 361
>gi|218895301|ref|YP_002443712.1| putative lipoprotein [Bacillus cereus G9842]
gi|218545293|gb|ACK97687.1| putative lipoprotein [Bacillus cereus G9842]
Length = 254
Score = 37.1 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 22/59 (37%), Gaps = 5/59 (8%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV-----YEKAVLFLKEQN 72
+ K L +AV VG + ++ V+ ++E+ + KA K +
Sbjct: 1 MKKLILISSLVLAVGLGVGCSNEETKKTDEPKKEAVQKEKELTAKDVFNKANEAFKNEE 59
>gi|150951081|ref|XP_001387328.2| anaphase-promoting complex component [Scheffersomyces stipitis CBS
6054]
gi|149388304|gb|EAZ63305.2| anaphase-promoting complex component [Pichia stipitis CBS 6054]
Length = 698
Score = 37.1 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 15/198 (7%), Positives = 43/198 (21%), Gaps = 1/198 (0%)
Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
+++ + + + + A ++ N+ +A +F + R
Sbjct: 96 KTAEFIGDKVLALTDDPNDAFWLAQVYFNSGNYLRAKSLLTS-KPEFEKSVSCRYLAAYC 154
Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
+ + + S + + +Q + +
Sbjct: 155 LIKLELWDEALDLVGESNPFRKDDKYQVRSTDGGIKLEASICYLRGLIYANQNNFEKAKE 214
Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220
+ + + + Y + L+ Y
Sbjct: 215 SYKEAILVDVKCYEAFTELISNNLMTPREEWDFITTLNYRDADDNDELIKLLYTSRLSKY 274
Query: 221 SDAEHAEEAMARLVEAYV 238
+ EA L E Y
Sbjct: 275 LNVSKLYEAEHILTEEYD 292
>gi|88603564|ref|YP_503742.1| TPR repeat-containing protein [Methanospirillum hungatei JF-1]
gi|88189026|gb|ABD42023.1| TPR repeat [Methanospirillum hungatei JF-1]
Length = 245
Score = 37.1 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 27/195 (13%), Positives = 55/195 (28%), Gaps = 6/195 (3%)
Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
+ ++K + F+ + +A E F + + + ++ F K ++
Sbjct: 44 EEIYFQKGLAFMNLIRYQEAVEAFEEALKLNDKDPRYWLYMGINYFFMGRYSKAIPCFNM 103
Query: 117 GEEY---ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
E +K + + L + + +
Sbjct: 104 VLEIDPTNLHALSNKGSALAEIDRHQESVECFNRILELIPGDVNALFNKGISLMKLKDYK 163
Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
G + + + E+G K AI F V+ + +A
Sbjct: 164 SAIGCFKEILKQDAEDSDAWFELGNCLSKTDNCKEAIKCFDRVIRIEPNHAEVYDA---K 220
Query: 234 VEAYVALALMDEARE 248
VE +L L DEA E
Sbjct: 221 VECLRSLGLNDEADE 235
>gi|107021873|ref|YP_620200.1| hypothetical protein Bcen_0315 [Burkholderia cenocepacia AU 1054]
gi|116688821|ref|YP_834444.1| hypothetical protein Bcen2424_0798 [Burkholderia cenocepacia
HI2424]
gi|170732120|ref|YP_001764067.1| tol-pal system protein YbgF [Burkholderia cenocepacia MC0-3]
gi|105892062|gb|ABF75227.1| conserved hypothetical protein [Burkholderia cenocepacia AU 1054]
gi|116646910|gb|ABK07551.1| conserved hypothetical protein [Burkholderia cenocepacia HI2424]
gi|169815362|gb|ACA89945.1| tol-pal system protein YbgF [Burkholderia cenocepacia MC0-3]
Length = 249
Score = 37.1 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 14/125 (11%), Positives = 39/125 (31%), Gaps = 14/125 (11%)
Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
+ K + +Y SPY A+++ G +Y
Sbjct: 136 QQQFRNGNFKAAAASFRAFIAKYPQSPYQPTAQYW--------------YGNAQYALRDY 181
Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
+ +Q +++ + A +A+ + + A++ + +Y A+
Sbjct: 182 RGSTATWQGIVSKFPQHPRAADALVAIGTNQLEQGQKAAAKKTFEQVVSQYAGSNAAQTA 241
Query: 267 ETLVK 271
+ ++
Sbjct: 242 QGKLE 246
Score = 36.3 bits (81), Expect = 4.3, Method: Composition-based stats.
Identities = 17/111 (15%), Positives = 32/111 (28%)
Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
+ +Y + R + V + + + G + AA F+
Sbjct: 94 RQQKEYYQDLDTRLKKFEPQQATIDGVEGTVQPGETDALSAAQQQFRNGNFKAAAASFRA 153
Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
+A Y + + A A AL + I ++PQ A
Sbjct: 154 FIAKYPQSPYQPTAQYWYGNAQYALRDYRGSTATWQGIVSKFPQHPRAADA 204
>gi|298250743|ref|ZP_06974547.1| transcriptional regulator, XRE family [Ktedonobacter racemifer DSM
44963]
gi|297548747|gb|EFH82614.1| transcriptional regulator, XRE family [Ktedonobacter racemifer DSM
44963]
Length = 850
Score = 37.1 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 23/206 (11%), Positives = 51/206 (24%), Gaps = 3/206 (1%)
Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
DS + Y+ A + + +A Y+ + S +
Sbjct: 476 DSEDSLALASLAYKTAQYLRERGQYGEAKPYYQRALHIREQILGPDHYETASVLHNLAVL 535
Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
++ E + Q + + + K
Sbjct: 536 YWKMGKYAEAEPLLQRALLIRGKTLDMDHPDVATTLNYLALLYWKMGKYAEAEPLLQRAL 595
Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
+ + + N LA E G+Y + A+ ++ S+ +
Sbjct: 596 HIWEQALNPDHPNIAYPLNNLAILYAEQGKYAEAEPLFQRALHIWEQSKG--SEHPDVAQ 653
Query: 229 AMARLVEAYVALALMDEARE-VVSLI 253
A+ L E + EA ++
Sbjct: 654 ALHNLAELSLIQEKYAEAESLYQRVL 679
>gi|30018437|ref|NP_830068.1| hypothetical protein BC0200 [Bacillus cereus ATCC 14579]
gi|218231297|ref|YP_002365016.1| putative lipoprotein [Bacillus cereus B4264]
gi|229041074|ref|ZP_04189836.1| hypothetical protein bcere0027_1540 [Bacillus cereus AH676]
gi|229125687|ref|ZP_04254717.1| hypothetical protein bcere0015_1550 [Bacillus cereus BDRD-Cer4]
gi|29893977|gb|AAP07269.1| hypothetical protein BC_0200 [Bacillus cereus ATCC 14579]
gi|218159254|gb|ACK59246.1| putative lipoprotein [Bacillus cereus B4264]
gi|228657740|gb|EEL13548.1| hypothetical protein bcere0015_1550 [Bacillus cereus BDRD-Cer4]
gi|228727246|gb|EEL78441.1| hypothetical protein bcere0027_1540 [Bacillus cereus AH676]
Length = 254
Score = 37.1 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 22/59 (37%), Gaps = 5/59 (8%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV-----YEKAVLFLKEQN 72
+ K L +AV VG + ++ V+ ++E+ + KA K +
Sbjct: 1 MKKIILISSLVLAVGLGVGCSNEKAKKTDEPKKEAVQKEKELTAKDVFNKANEAFKNEE 59
>gi|89095046|ref|ZP_01167974.1| Tetratricopeptide [Oceanospirillum sp. MED92]
gi|89080678|gb|EAR59922.1| Tetratricopeptide [Oceanospirillum sp. MED92]
Length = 789
Score = 37.1 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 30/273 (10%), Positives = 68/273 (24%), Gaps = 26/273 (9%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQ-----NF 73
++ L + ++ L + + + + YE A + + N
Sbjct: 1 MFNKKLKVLMLVSCLALTACQSADEKVAVYVANAKEHIAKGDYEAAHIEFRNALQINPNH 60
Query: 74 SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
+A + + L +Q A E Q ++
Sbjct: 61 VEALYEVTKVFEQKKDWAKIHRYLERVIELQPDHVDALVAIGGIELTAQQLDKALERSEK 120
Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ----- 188
V A++ + +E P A + R +
Sbjct: 121 AMRVAPGSAKVRSFHSVVLFKLGDAEGGVREALESLKIDPENIDAILLLASERLKAGDSL 180
Query: 189 -------LAAKEVEIGRYYLKRGEYVAA------IPRFQLVLANYSDAEHAEEAMARLVE 235
A K+ I +K + F+ ++ Y E A+A+
Sbjct: 181 GALDYLNEADKQDNILVQLMKVRAFNEQKNLAGATQTFEELIKQYPQDEKYYLALAKQ-- 238
Query: 236 AYVALALMDEAREVVSLIQERYPQGYWARYVET 268
++ ++A +V+ P +
Sbjct: 239 -FLLFGEREKADQVLQRALTDLPDNIEVKLSYA 270
>gi|326427391|gb|EGD72961.1| mbre TPR repeat protein [Salpingoeca sp. ATCC 50818]
Length = 777
Score = 37.1 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 20/222 (9%), Positives = 51/222 (22%), Gaps = 15/222 (6%)
Query: 50 SVTDVRYQREVY-EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
R +Y + + +F KA E + + S +
Sbjct: 305 EGEKGRNAAALYGNLGNAYGDKGDFDKAIELCKKALAIKVETLGEKHSSTAVTYNNLGNA 364
Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMS--YAQMIRDVPYDQRATKLMLQYMSRIV 166
+ + + V+ + + + + + + Y + +
Sbjct: 365 YRNKGEYDKAIEFYEKDLAITVEVLGEKHPSTASTYGNLGAAYHSKGDHDRAIHYYEKAL 424
Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
+ + + N AA + + A + + + +
Sbjct: 425 AIQVETL-GEKHPTTASTYNNLGAAYKNKGDYDRAIECYEKALAIKVETLGEKHPSTAQT 483
Query: 227 EEAMARLVEAYVALALMDEAREVV--------SLIQERYPQG 260
L AY D A + E++P
Sbjct: 484 YN---NLGIAYKNKGEYDRAIAFYEKDLTITVETLGEKHPGT 522
>gi|300770842|ref|ZP_07080719.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
33861]
gi|300762115|gb|EFK58934.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
33861]
Length = 1040
Score = 37.1 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 27/240 (11%), Positives = 64/240 (26%), Gaps = 19/240 (7%)
Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS----------RDFPFAGVARK 95
+ + +Y KA + + + +A FN+ ++ +A
Sbjct: 491 SEANRYDEEINALAIYWKAEAMYEVRKYKEATANFNKFLSLPAARNTDVYNYANYALAYA 550
Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
+ + + + + G+E I + + + YD+
Sbjct: 551 AFRNENYNTSANYFERFLSMGGKEGIELNTRNDAIARLADSYFSLKNYGRAMTEYDKLIN 610
Query: 156 KLMLQY---------MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
+ + + + N EI Y G+Y
Sbjct: 611 SKAQSQDYALFQRGIIQGLQGNSSGKIATLQSVVQKYPKSNYADDVAFEIPYTYFTLGQY 670
Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
AI Q ++ Y + + A+ + D A + + ++Y A+
Sbjct: 671 DHAISGLQSMVEKYPRSSYVPRALVTIGLVQYNQDNNDAALKTFQRVVDQYSTTDEAKQA 730
Score = 36.7 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 19/218 (8%), Positives = 56/218 (25%), Gaps = 9/218 (4%)
Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
D + ++ + ++++ KA E+F + + A+ +
Sbjct: 128 KYIKDYPASPNSKAAYFQIGRSYYAKKDYKKAIEWFTKIDGKNLAGAENTEYRFKLAYSR 187
Query: 105 YSAGKYQQAASLG-----EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
+ Y A + ++ Q Y+ YL + T
Sbjct: 188 FMTEDYTSAKPVFESLKDQKSEYQEASIYYYAYLCYLDAEYKTALNEFERLQGSKTYESS 247
Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219
+ + Y + + + + E ++ R + + +
Sbjct: 248 YPYYITALYFLDKRYDDVLNYALPILQTTKQDNETDMFRVIAATYFIKGDLKKSKEYYDK 307
Query: 220 Y----SDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+ + ++ L D+A + +
Sbjct: 308 FQSQDQGKTQNNQDSYQIGYINYKLGDYDKAITELEKM 345
>gi|262193823|ref|YP_003265032.1| tol-pal system protein YbgF [Haliangium ochraceum DSM 14365]
gi|262077170|gb|ACY13139.1| tol-pal system protein YbgF [Haliangium ochraceum DSM 14365]
Length = 343
Score = 37.1 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 14/93 (15%), Positives = 33/93 (35%)
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
+ + + +G R +Y A+ F V + +A+ + +
Sbjct: 247 FLDMYPRHDLSDNAQYWLGESLYDRKQYREALAAFLAVKQRFPRGNKVPDALLKAGFCRI 306
Query: 239 ALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
AL +AR ++ + E +P+ A ++
Sbjct: 307 ALGEHAQARAALAHVIELFPESQPAAIAAERLE 339
>gi|218128665|ref|ZP_03457469.1| hypothetical protein BACEGG_00236 [Bacteroides eggerthii DSM 20697]
gi|217989120|gb|EEC55435.1| hypothetical protein BACEGG_00236 [Bacteroides eggerthii DSM 20697]
Length = 556
Score = 37.1 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 19/237 (8%), Positives = 51/237 (21%), Gaps = 11/237 (4%)
Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFS-KA 76
+ K+ + F ++ + E Y + + Y A + + + A
Sbjct: 1 MMKKYKMITFCALIAAGVTSCELDEKPTSYYEKDAYFQT----YNHAKMAV-VGIYDCLA 55
Query: 77 Y-EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
+++ Q P + + + +
Sbjct: 56 IDKHYGQFEMATPASDDTYYIQGTGTDNTRRDIAHYMVKTTNTWIADLWKYKYMGIDRAN 115
Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
+ M + + R + Y F +
Sbjct: 116 YAIANIKNMEGYEEDVELQELVAQACFLRAFLAFDLIKYWGDVPFKTEYTFSYGDIANGR 175
Query: 196 IGRYYLKRGEYVAAIPRFQLVL----ANYSDAEHAEEAMARLVEAYVALALMDEARE 248
+ R + + + + A A L+ Y+ A ++
Sbjct: 176 VSREEIYKSIIDDLNFAKNNLQQGDAELSPEVPSQGAAHALLMRVYLQRAGYSLQQD 232
>gi|145489466|ref|XP_001430735.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124397835|emb|CAK63337.1| unnamed protein product [Paramecium tetraurelia]
Length = 504
Score = 37.1 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 19/215 (8%), Positives = 65/215 (30%), Gaps = 11/215 (5%)
Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
++Y+ A + +++++ KA E + + + + A + +
Sbjct: 38 NMTGEDLYQSAQTWEEQRDYLKAIEIYLEVTPQNTQSEDVMTRAWERAIQIAANYDKDKY 97
Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
+ + + E K ++ +L Y Q + +++++ +
Sbjct: 98 PRIVQIVCKRLIEIKKLETAAFLYEQVGQYQEAVTTYVQGREFEKAKQVAQMINNKELNT 157
Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRY-----YLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
+ + + ++ + + + E+ +
Sbjct: 158 KLMDYITKEQRKYGASTGQANVMIETGDVAAAMEMLAQKNDWGQCLQLADKH-GVEYLNK 216
Query: 229 AMARLVEAYVALALMDEAREVVS-----LIQERYP 258
+ R V+ + E + ++ +IQ+ YP
Sbjct: 217 YLMRYVKITMQQGRFSETIQSLATYGMPIIQQNYP 251
>gi|52081228|ref|YP_080019.1| hypothetical protein BL02038 [Bacillus licheniformis ATCC 14580]
gi|52786608|ref|YP_092437.1| YrrB [Bacillus licheniformis ATCC 14580]
gi|52004439|gb|AAU24381.1| conserved protein YrrB [Bacillus licheniformis ATCC 14580]
gi|52349110|gb|AAU41744.1| YrrB [Bacillus licheniformis ATCC 14580]
Length = 216
Score = 37.1 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 22/212 (10%), Positives = 51/212 (24%), Gaps = 1/212 (0%)
Query: 61 YEK-AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
Y + + +++ +F KA E F + + V + + +
Sbjct: 3 YNQIGIDAMQKGDFEKAAEAFTKAIDENSGDPVPYINFANLLSAVGELDRALKFYDRAAA 62
Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
+ + Y++ Y + R + K A
Sbjct: 63 LDEKAGAAYYGAGNVYVMKERYQEAKDMFEKAHRTGMENSDLYYMLGTTLVKLEQPKLAM 122
Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
Y+ A Y + +A L AY
Sbjct: 123 PYLQRAAELNDADVEARFHYAMCLANEGMLDEAITEFSNVTERDPSHADAFYNLGVAYAF 182
Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETLVK 271
A ++++ + P + + L++
Sbjct: 183 KEDRKTALDMLNKALDIQPDHMLSIRAKQLLE 214
>gi|83950086|ref|ZP_00958819.1| hypothetical protein ISM_03290 [Roseovarius nubinhibens ISM]
gi|83837985|gb|EAP77281.1| hypothetical protein ISM_03290 [Roseovarius nubinhibens ISM]
Length = 268
Score = 37.1 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 10/44 (22%), Positives = 17/44 (38%)
Query: 224 EHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
A A+ RL + +EA ++ + ERYP +
Sbjct: 216 PAASTALYRLGRTLGRIGQTNEACVTLTEVGERYPGSPAVAEAQ 259
>gi|75758451|ref|ZP_00738573.1| hypothetical protein RBTH_07281 [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|228898922|ref|ZP_04063201.1| hypothetical protein bthur0014_1550 [Bacillus thuringiensis IBL
4222]
gi|228963270|ref|ZP_04124437.1| hypothetical protein bthur0004_1590 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|74494078|gb|EAO57172.1| hypothetical protein RBTH_07281 [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|228796401|gb|EEM43842.1| hypothetical protein bthur0004_1590 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228860675|gb|EEN05056.1| hypothetical protein bthur0014_1550 [Bacillus thuringiensis IBL
4222]
Length = 254
Score = 37.1 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 22/59 (37%), Gaps = 5/59 (8%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV-----YEKAVLFLKEQN 72
+ K L +AV VG + ++ V+ ++E+ + KA K +
Sbjct: 1 MKKLILISSLVLAVGLGVGCSNEETKKTDEPKKEAVQKEKELTAKDVFNKANEAFKNEE 59
>gi|222823220|ref|YP_002574793.1| conserved hypothetical lipoprotein [Campylobacter lari RM2100]
gi|222538441|gb|ACM63542.1| conserved hypothetical lipoprotein [Campylobacter lari RM2100]
Length = 448
Score = 37.1 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 19/258 (7%), Positives = 61/258 (23%), Gaps = 7/258 (2%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRY-QREVYEKAVLFLKEQN---FS 74
+ L ++ + + L+ + E + + + + +++ +
Sbjct: 1 MKNKILFSVIALTAILFSACANHAKVNNELEQKLIQKICLNEFFVQEMAKVDKKDDPVYV 60
Query: 75 KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
+ + ++ + + T +S
Sbjct: 61 GLNAGLIARNCSDFNLSNEFFDKVEESYQVDVDLRDGASKLAKTATTTLINDSILDYDGS 120
Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
+ + R + R + A+ + A KE
Sbjct: 121 LYERIMVNAYKGLNFMSEGDYNNARVEFKRALLRQDRAKDYFKAQIAKNKADLEKAKKED 180
Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEH--AEEAMARLVEAYVALALMDEAREVVSL 252
K +++ + +S +++ A Y A+++
Sbjct: 181 PNFDKNFKESN-KQINAQYEALFEEFSTSKNFTNPYATYLASIFYFMNKDYTLAKDLFKE 239
Query: 253 IQERYPQGYWARYVETLV 270
IQ P+ ++
Sbjct: 240 IQILNPKNKEIAKEYKII 257
>gi|322495154|emb|CBZ30458.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 425
Score = 37.1 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 26/224 (11%), Positives = 64/224 (28%), Gaps = 11/224 (4%)
Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYE---KAVLFLKEQNFSKAYEYFNQCSRDFPFAGV 92
+G + T ++E+ E +A ++ FS A E + + ++
Sbjct: 56 IGSNASTGDSSTGTDATADLSEKELIELNKEAAEAFEKGEFSSAIEAWEKVAQSKQHTPN 115
Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
+ + + + G+ + + + V + + +
Sbjct: 116 SPTLMSCLNNLACAYGEMGDSIRKLKLLERSRDLVQAVYGTDHPQYGMVLYNMACAKEEM 175
Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
M Q + + + + + A+ + A + L+ E I +
Sbjct: 176 GLYPDMKQLLEQSLALHEKRFNPRHAKVGRVLLLLAAAHGHLGEHEAQLRTAERAYEIVK 235
Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMD----EAREVVSL 252
+ AM L AY A ++ A+ S+
Sbjct: 236 RHCGPEHVQTTI----AMMTLGRAYGAAGQVERQLQLAQAAYSI 275
>gi|307718781|ref|YP_003874313.1| hypothetical protein STHERM_c10950 [Spirochaeta thermophila DSM
6192]
gi|306532506|gb|ADN02040.1| hypothetical protein STHERM_c10950 [Spirochaeta thermophila DSM
6192]
Length = 226
Score = 37.1 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 15/112 (13%), Positives = 37/112 (33%), Gaps = 1/112 (0%)
Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
L +++ E + ++ A ++ G+ A R++ V+
Sbjct: 109 LGHLAFWQEDWDDASIWFDRLAKEFPRSYLAAVALLDAAAARENLGDTSGATTRYEKVIE 168
Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
+ A+ L + + AR++ + + E YP W+ +
Sbjct: 169 A-GFSVLKPRALFSLGRLKESSGDREGARQIYTQLLEDYPSSQWSHLARDRM 219
>gi|292493884|ref|YP_003529323.1| hypothetical protein Nhal_3926 [Nitrosococcus halophilus Nc4]
gi|291582479|gb|ADE16936.1| Tetratricopeptide TPR_2 repeat protein [Nitrosococcus halophilus
Nc4]
Length = 578
Score = 37.1 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 29/237 (12%), Positives = 56/237 (23%), Gaps = 35/237 (14%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
+ + +L +++ + +A YF + + A AR L A +Q +
Sbjct: 288 EQEQPESPDVLIAQGLLAMEQLEYERAKNYFQRLLQIGESAAQARFYLGRLAELQGDPQR 347
Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM---SRIV 166
+ V G A R ++ + ++ I+
Sbjct: 348 AIKWYGSITRGGLVVDAQVRQAVVIARQGNMQAARQRLQLLSKKFPEQAARFQLAEGEIL 407
Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD---- 222
R + G QL+L +
Sbjct: 408 VNAERYGEAMTHYDDALQERPEDTNLLYARALVAENLGRLDILEQDLQLILELDPNNAEA 467
Query: 223 -----------AEHAEEAMARLVEA-----------------YVALALMDEAREVVS 251
E EEA+ + A + L DEA + +
Sbjct: 468 LNALGYTLADRTERLEEALHYISRAMELQPNNAFILDSMGWVHYRLGNYDEAEKYLR 524
>gi|300777177|ref|ZP_07087035.1| TPR repeat-containing protein [Chryseobacterium gleum ATCC 35910]
gi|300502687|gb|EFK33827.1| TPR repeat-containing protein [Chryseobacterium gleum ATCC 35910]
Length = 987
Score = 37.1 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 28/196 (14%), Positives = 59/196 (30%), Gaps = 6/196 (3%)
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
Y + N+ +A +YF + ++L A V Y G Y A E+
Sbjct: 436 YLLGTEEFNKGNYDEAEKYFLRSLGFNINKEFNSRALYWLAQVYYQKGNYPSAIVRYEKL 495
Query: 121 ITQYPESKNV------DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
+ + K + A + R+ + + +
Sbjct: 496 LNENFPEKQQLPYDLGYAYFKSKKFDQAATYFKQYLANPKPEFKNDAELRLADIHYANND 555
Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234
+ A + + +G+ A I + +L+ Y D+E+ ++A +
Sbjct: 556 LNEAIAIYDKNEDATDYTLYQKAMALGFKGDTQAKINNLKNLLSKYPDSEYYDDAQYEIG 615
Query: 235 EAYVALALMDEAREVV 250
AY A + +
Sbjct: 616 TAYAAQDDFANSNDYF 631
Score = 35.5 bits (79), Expect = 7.1, Method: Composition-based stats.
Identities = 27/223 (12%), Positives = 64/223 (28%), Gaps = 16/223 (7%)
Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
+ ++YE + + + + +A Y+NQ L +A++ +
Sbjct: 280 QNPSENDLYEMGFVAAQLKKYDEAVSYYNQLLNSNSALAQNAYYQLGNAYLAVDKKQEAL 339
Query: 113 AASLGEEYITQYPESKNVDYVYY--------LVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
+A + + K + + Y S + +I+ + + + S
Sbjct: 340 SAFRSSYQMDYDAKVKKLAHEQYAKLSYDIGNPFESPSAVIQSYINENQNGANATEMRSL 399
Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA- 223
+V+ Y S K + ++ G + + +
Sbjct: 400 LVKSYLYSGNYKETLNAIDRLQSSTPEINKVDQEVSYLLGTEEFNKGNYDEAEKYFLRSL 459
Query: 224 ------EHAEEAMARLVEAYVALALMDEAR-EVVSLIQERYPQ 259
E A+ L + Y A L+ E +P+
Sbjct: 460 GFNINKEFNSRALYWLAQVYYQKGNYPSAIVRYEKLLNENFPE 502
>gi|156973903|ref|YP_001444810.1| hypothetical protein VIBHAR_01613 [Vibrio harveyi ATCC BAA-1116]
gi|156525497|gb|ABU70583.1| hypothetical protein VIBHAR_01613 [Vibrio harveyi ATCC BAA-1116]
Length = 188
Score = 37.1 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 11/93 (11%), Positives = 30/93 (32%)
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
+F + +A + + + +Y D+ +A+ +L +
Sbjct: 96 QFQKDYPDSTYSANSHYWLGQLYFAKKQDKEAVKSFAAVVSYKDSNKRADALVKLGDIAE 155
Query: 239 ALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
A++ + + YP A+ + +K
Sbjct: 156 RNKNDAHAKKYYQQVVDEYPGSASAKVAGSKLK 188
>gi|74318222|ref|YP_315962.1| TPR repeat-containing protein [Thiobacillus denitrificans ATCC
25259]
gi|74057717|gb|AAZ98157.1| conserved hypothetical protein containg TPR repeat [Thiobacillus
denitrificans ATCC 25259]
Length = 265
Score = 37.1 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 24/192 (12%), Positives = 56/192 (29%), Gaps = 2/192 (1%)
Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
+ + + + + + A +
Sbjct: 62 QNSKLLDVQQEVERLKAEVARLRGQAEVQVHQLDTLAKRQSDLYADLDQRVGEMAKAAAP 121
Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
G + + D + RA + L + +Y ++
Sbjct: 122 AAAASTAAPGDAASAAAPDAVSESRAYEAALGQFRQ--GKYEDAIASFKGFLKTYPASTL 179
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
A + +G Y +Y AA+ + Q ++A Y + +A+ + + +AL M AR+
Sbjct: 180 AANAQYWVGYAYYALKDYKAALAQQQKLVAAYPASPKVPDALLNMATSQIALDDMAGARK 239
Query: 249 VVSLIQERYPQG 260
+ I ++P
Sbjct: 240 TLEQIVAKHPGT 251
Score = 36.7 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 15/92 (16%), Positives = 34/92 (36%)
Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
+ YE A+ ++ + A F + +P + +A + + Y+ Y+ A +
Sbjct: 143 SESRAYEAALGQFRQGKYEDAIASFKGFLKTYPASTLAANAQYWVGYAYYALKDYKAALA 202
Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147
++ + YP S V + S +
Sbjct: 203 QQQKLVAAYPASPKVPDALLNMATSQIALDDM 234
>gi|49481043|ref|YP_039004.1| ABC transporter substrate-binding protein [Bacillus thuringiensis
serovar konkukian str. 97-27]
gi|49332599|gb|AAT63245.1| ABC transporter, substrate-binding protein [Bacillus thuringiensis
serovar konkukian str. 97-27]
Length = 270
Score = 37.1 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 21/202 (10%), Positives = 47/202 (23%), Gaps = 3/202 (1%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K LT S ++ L + + + L E+ EKA L+++ +
Sbjct: 1 MKKLLLTALISTSIFGLAACGGKDNDEKKLVVGASNVPHAEILEKAKPLLEKKGIELEVK 60
Query: 79 YFNQCSRDFP---FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
F + +++ + + + + + Y
Sbjct: 61 KFQDYVLPNKSLADKDLDANYFQHIPYLEKEMKDKKYDFEVAGKIHLEPIGVYSQKYKSL 120
Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
A +I L + I++ VK + L K
Sbjct: 121 KELPDGATIIMSNSVADHGRGLAILQKEGILKIKDGVDPVKATPKDIADNPKNLKFKTDI 180
Query: 196 IGRYYLKRGEYVAAIPRFQLVL 217
+
Sbjct: 181 EPGLLPQVYNNKEGDAVLINSN 202
>gi|170077429|ref|YP_001734067.1| serine/threonine kinase [Synechococcus sp. PCC 7002]
gi|169885098|gb|ACA98811.1| serine/threonine kinase [Synechococcus sp. PCC 7002]
Length = 714
Score = 37.1 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 22/227 (9%), Positives = 57/227 (25%), Gaps = 12/227 (5%)
Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
D + +EK + +++A + Q + +Y++
Sbjct: 462 DSQQVWAWFEKGWIHHNRAEYNEAIAAYQQALKLDDQNANIWYQQ---GNSYSKLQRYRE 518
Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
A + + P+ Y + + T+L N+
Sbjct: 519 AKNAYVRVVELEPDRAPAWYSLGMAQENLRNYPEAQDAFANVTRLEPNNDRAWYHLAWNA 578
Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA--- 229
+ + +A + + + + + Y + ++
Sbjct: 579 EQNGDRPTAIDAYQRTVALNSDDRPSWRSLGNLLYDSE-NYDEAITAYENTLRLDDVDGD 637
Query: 230 -MARLVEAYVALALMDEAREVV-SLIQERYPQGYW---ARYVETLVK 271
ARL AY A A +Q + + + ++
Sbjct: 638 IWARLGNAYKATGQYQAAINAYDEALQYKPNDPDILGDRQDAQERLQ 684
>gi|332710566|ref|ZP_08430511.1| serine/threonine protein kinase [Lyngbya majuscula 3L]
gi|332350621|gb|EGJ30216.1| serine/threonine protein kinase [Lyngbya majuscula 3L]
Length = 726
Score = 37.1 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 19/202 (9%), Positives = 51/202 (25%), Gaps = 4/202 (1%)
Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
Y++ + + A + + Q + P A S + +
Sbjct: 512 KPNSAEAWYQRGNDLSNLRKYKDAAKSYQQAVQFQPNFYQAWYSWGNTLNQLGKYQEALG 571
Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
+ + + ++ + Q D + + N+
Sbjct: 572 SFDQAVKLQPKSYQAWYS----RGWTLHQVQRYEDALEAYYKAIKLKSKPYQAWYSRGNT 627
Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232
Y Q + + + + G + +++ +A Y A +
Sbjct: 628 FYKLERYKDAIASYQQAVNYKPDYSQAWYSLGNALVKRNKYKKAIAAYDKAVRYQPNYRE 687
Query: 233 LVEAYVALALMDEAREVVSLIQ 254
++A EA++ I
Sbjct: 688 AIKARERANSELEAQKREQEIG 709
>gi|257061460|ref|YP_003139348.1| lytic transglycosylase catalytic [Cyanothece sp. PCC 8802]
gi|256591626|gb|ACV02513.1| Lytic transglycosylase catalytic [Cyanothece sp. PCC 8802]
Length = 730
Score = 37.1 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 29/230 (12%), Positives = 69/230 (30%), Gaps = 5/230 (2%)
Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
RD + + A + +++ KA + + +
Sbjct: 216 ATNPMRDRLVKDYASQLTPEDWQAIADGYWAVEDYYKAALAYQKAPSTAQNLYRIGRGQQ 275
Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL- 157
+ A L + + + + L A D ++ +
Sbjct: 276 LQPNGNNKATVQAAYQKLLVAFPQAPEAALALQRLAQLSQPETAISYLDQLINKFPEQAG 335
Query: 158 -MLQYMSRIVERYTNSPYVKGARFYVTVGRNQ---LAAKEVEIGRYYLKRGEYVAAIPRF 213
L + ++++ R + + A I + +RG+ + A
Sbjct: 336 YALVKKAELLDKLNRQGEATKIRQTLLSKYAKSDATAEYRWLIAQKAAERGDALKAWTWA 395
Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
Q ++ N ++ A +A + + L ++EA + R+PQ Y+A
Sbjct: 396 QPIVVNNPESPLAPKAGFWVGKWAQQLGRLEEAETAFEYVVTRHPQSYYA 445
>gi|170727074|ref|YP_001761100.1| tol-pal system protein YbgF [Shewanella woodyi ATCC 51908]
gi|169812421|gb|ACA87005.1| tol-pal system protein YbgF [Shewanella woodyi ATCC 51908]
Length = 243
Score = 37.1 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
K+ Y AIP F NY ++ ++ A L + A+E S + +R+ +
Sbjct: 135 KQKRYDEAIPAFSAFTKNYPNSTYSANANYWLGQLLYNKGEFTSAKEAFSTVVDRFKESN 194
Query: 262 WARYVETLVK 271
+ ++LVK
Sbjct: 195 --KRGDSLVK 202
>gi|301756633|ref|XP_002914155.1| PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP4-like
[Ailuropoda melanoleuca]
Length = 454
Score = 37.1 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 23/191 (12%), Positives = 55/191 (28%), Gaps = 5/191 (2%)
Query: 74 SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
KA + + + + + + + + + ES ++
Sbjct: 200 EKAVQRMEKGEHSVVYLKPSYAFGNVGKEKFQIPPNAELKYEIHLKSFEKAKESWEMNSE 259
Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
L + + V + + K + +IV + F + A +
Sbjct: 260 EKLEQSTIVKERGTVYFKEGKYKQAVLQYKKIVSWLEY-----ESSFSNEDAQKAQALRL 314
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+ + A + + E+ + R EA++A+ D AR +
Sbjct: 315 ASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLFRRGEAHLAVNDFDLARADFQKV 374
Query: 254 QERYPQGYWAR 264
+ YP A+
Sbjct: 375 LQLYPSNKAAK 385
>gi|260788475|ref|XP_002589275.1| hypothetical protein BRAFLDRAFT_102517 [Branchiostoma floridae]
gi|229274451|gb|EEN45286.1| hypothetical protein BRAFLDRAFT_102517 [Branchiostoma floridae]
Length = 1401
Score = 37.1 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 13/217 (5%), Positives = 43/217 (19%), Gaps = 5/217 (2%)
Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ-----CSRDFPFAGVAR 94
+ + + + +A ++ +
Sbjct: 1100 SLEIERGLYEDESHPMIMESINNLGSICYLLGETEEAISLLSKSLSAFIDHVGEGVPHMK 1159
Query: 95 KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
+ ++ +++ + + + V +
Sbjct: 1160 VVTGHLNLGAAYDRVGRYDEAVTHLQSAMDMQTQLHGDEPHPDTAAILMKLASVRSNLGQ 1219
Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
+ + R ++ + + +G Y ++ +
Sbjct: 1220 QEEAIGLYQRSLDMFWLIYGDAVPHSDTGSCLINMGQAHRRLGDYSRAISCHLEGLEVLN 1279
Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
+ S A RL E Y +EA
Sbjct: 1280 AFYGSESLHPAVVLATHRLGEIYFEHGDFNEAFTTFK 1316
>gi|114650348|ref|XP_001138581.1| PREDICTED: similar to p58 isoform 1 [Pan troglodytes]
Length = 463
Score = 37.1 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 22/258 (8%), Positives = 66/258 (25%), Gaps = 20/258 (7%)
Query: 34 FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93
L ++ + + + +A+ +++ A + ++ +
Sbjct: 131 VLKSNPSENEEKEAQSQLIKSDEMQRLRSQALNAFGSGDYTAAIAFLDKILEVCVWDAEL 190
Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153
R+ + K + E+ Y + + +V +
Sbjct: 191 RELRAECFIKEGEPRKAISDLKAASKLKNDNTEAFYKISTLYYQLGDHELSLSEVRECLK 250
Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK----------- 202
+ + + + + ++ A + GR A + E
Sbjct: 251 LDQDHKRCFAHYKQVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPSIAEYTIRSKE 310
Query: 203 -----RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA-REVVSLIQER 256
+ + ++ A+ EAY+ + DEA ++ + +
Sbjct: 311 RICHCFSKDEKPVEAIRVCSEVLQMEPDNVNALKDRAEAYLIEEMYDEAIQDYETAQEHN 370
Query: 257 YPQGYWA---RYVETLVK 271
+ L+K
Sbjct: 371 ENDQQIREGLEKAQRLLK 388
>gi|281412533|ref|YP_003346612.1| Tetratricopeptide TPR_2 repeat protein [Thermotoga naphthophila
RKU-10]
gi|281373636|gb|ADA67198.1| Tetratricopeptide TPR_2 repeat protein [Thermotoga naphthophila
RKU-10]
Length = 357
Score = 37.1 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 32/219 (14%), Positives = 65/219 (29%), Gaps = 9/219 (4%)
Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGK 109
D Y K L +++ + +Y + + A + + A
Sbjct: 127 DENYAPAYELKGSLLVEQGKIEEGIKYLDKAVEIDPWLVQAYASLGEAHYNLGDYEKAIH 186
Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
Y + Y A+ + + L +S++
Sbjct: 187 YWERELEYNPNDKITYFMITEAYHEINRKDLAAKTLERLLKIDPDNIPALYQLSQLYRDL 246
Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
N K + + + + R LK G Y + + ++ + + A
Sbjct: 247 GNEEKAKEMEEKIMNCKPKYPTELEPWARVMLKHGRYKEVVEELEKIVES---SPLNTLA 303
Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
LV YV L +D+ARE++ I + +W Y +
Sbjct: 304 RLLLVVPYVKLGQIDKAREILEDIGQN---NFWYYYGKK 339
>gi|196033231|ref|ZP_03100644.1| putative ABC transporter, substrate-binding protein [Bacillus
cereus W]
gi|196043820|ref|ZP_03111057.1| putative ABC transporter, substrate-binding protein [Bacillus
cereus 03BB108]
gi|218906178|ref|YP_002454012.1| putative ABC transporter, substrate-binding protein [Bacillus
cereus AH820]
gi|195994660|gb|EDX58615.1| putative ABC transporter, substrate-binding protein [Bacillus
cereus W]
gi|196025156|gb|EDX63826.1| putative ABC transporter, substrate-binding protein [Bacillus
cereus 03BB108]
gi|218536628|gb|ACK89026.1| putative ABC transporter, substrate-binding protein [Bacillus
cereus AH820]
Length = 270
Score = 37.1 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 12/70 (17%), Positives = 23/70 (32%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K LT S ++ L + + + L E+ EKA L+++ +
Sbjct: 1 MKKLLLTALISTSIFGLAACGGKDNDEKKLVVGASNVPHAEILEKAKPLLEKKGIELEVK 60
Query: 79 YFNQCSRDFP 88
F
Sbjct: 61 KFQDYVLPNK 70
>gi|61355277|gb|AAX41123.1| FK506 binding protein 4 59kDa [synthetic construct]
Length = 459
Score = 37.1 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 25/233 (10%), Positives = 69/233 (29%), Gaps = 14/233 (6%)
Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQN---------FSKAYEYFNQCSRDFPFAG 91
+ + ++ + Y+ +++++ L + +A + + +
Sbjct: 163 KPNEGAIVEVALEGYYKDKLFDQRELRFEIGEGENLDLPYGLERAIQRMEKGEHSIVYLK 222
Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151
+ + + L + + ES ++ L + + V +
Sbjct: 223 PSYAFGSVGKEKFQIPPNAELKYELHLKSFEKAKESWEMNSEEKLEQSTIVKERGTVYFK 282
Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
+ K L +IV + F + A + + + A
Sbjct: 283 EGKYKQALLQYKKIVSWLEY-----ESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSA 337
Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
+ + E+ + R EA++A+ + AR + + YP A+
Sbjct: 338 AIESCNKALELDSNNEKGLFRRGEAHLAVNDFELARADFQKVLQLYPNNKAAK 390
>gi|57505317|ref|ZP_00371246.1| probable periplasmic protein Cj0114 [Campylobacter upsaliensis
RM3195]
gi|57016453|gb|EAL53238.1| probable periplasmic protein Cj0114 [Campylobacter upsaliensis
RM3195]
Length = 312
Score = 37.1 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 18/226 (7%), Positives = 66/226 (29%), Gaps = 9/226 (3%)
Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
+++ + ++++ + Y + +++ N + + + S S
Sbjct: 92 ETNSESVENNLSLELKSLKAYVEESRKIQDANHKQVKKILIELSSLVDSINNNYVSKNDF 151
Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
+ + + + V + + + + KL ++
Sbjct: 152 NDTNRTKTTFSTMINDSNLTSEENANIAVTSQVQQIKIDNNWKKEKHNEIL----KLAIK 207
Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220
++ + + Y+ + A +G K+ Y AI ++ +
Sbjct: 208 DLNENLFENSR-----EKLNYLIEKHYKPARANFWLGEIEYKQQNYNNAIVYYKKSSSIS 262
Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
+ ++ + + + + A + ++ YP A+
Sbjct: 263 TKGDYFPKLLYHTAISLDKVGDTKSANDFYKALKTNYPNTPEAKAS 308
>gi|330961815|gb|EGH62075.1| peptidase aspartic, active site protein [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 654
Score = 37.1 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 32/251 (12%), Positives = 66/251 (26%), Gaps = 21/251 (8%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
K + + Q+ + + +A + +++ A
Sbjct: 1 MKRPFILSLLVTGLSFSAPFSQAET----LPLPLTGPAYAIANEAYMAYNRKDYDLAIAK 56
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
N+ R A R + ++ +Y Q+ + Y
Sbjct: 57 ANEALRQRGDADQLRDLIALAERDKYRRDHPQRVTKARPKPGYLEGNQALRAYARQDYSG 116
Query: 140 SYAQ------MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA-------RFYVTVGR 186
S + + LQ R+ E T + A +
Sbjct: 117 SASHARKAIAQAPKNLDYRMMLIEALQRQQRLDEAQTAINDAEQALGPQPVLTRRRQAIQ 176
Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
Q+A + G L RG++ A+ + + ++ + LV A +A EA
Sbjct: 177 EQVAVDKAATGYKALARGDHETAVSEARDAVRSFPKQMAYRK---LLVSALIAQGQYAEA 233
Query: 247 REVV-SLIQER 256
R +
Sbjct: 234 RSAATEALALN 244
>gi|326434630|gb|EGD80200.1| mbre TPR repeat protein [Salpingoeca sp. ATCC 50818]
Length = 829
Score = 37.1 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 12/199 (6%), Positives = 39/199 (19%), Gaps = 7/199 (3%)
Query: 56 YQREVY-EKAVLFLKEQNFSKAYEYFNQCSRDFPF--AGVARKSLLMSAFVQYSAGKYQQ 112
+ Y ++ + + A + + + + + +
Sbjct: 397 SAAQTYSNIGNVYYAQGEYDSAIKQYEKAMEINLEALGEKHPGTANTHNNIGNVYFGKGE 456
Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
E + + + I + + ++Y + +
Sbjct: 457 YDRAIEHFEKARKVYVETLGEKHPTTAIAYKGIGNALSSKGEHDTAIEYYAAAKAIRLET 516
Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232
+ A A Q + + +
Sbjct: 517 LGPTHPDTAESFSDFGNA-HSEIGEYGVAIDHLEAAKEIHLQTLGEEHPTTAYT---FNN 572
Query: 233 LVEAYVALALMDEAREVVS 251
L AY + +A +
Sbjct: 573 LAAAYDDMGEYSKAMKYYE 591
>gi|261416282|ref|YP_003249965.1| TPR repeat-containing protein [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261372738|gb|ACX75483.1| TPR repeat-containing protein [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 1292
Score = 37.1 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 27/211 (12%), Positives = 56/211 (26%), Gaps = 22/211 (10%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
+ ++E A + + KA E F + + + + K +L +A +
Sbjct: 690 PNIDIADKAIFEAAAAYEATNQYKKAAETFMLLPKSYAKSPLTVKGILRAASNYKKDKQP 749
Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
QAA + + S K +RY
Sbjct: 750 VQAAKTFLFITDN--------FPQDSMAFSAIGFAAQTYDSIPDKKQAAITFELAYKRYP 801
Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
+ + Y + AI + ++ +Y + +A +A
Sbjct: 802 QNEETPSFLY--------------SACLSYDEAKMTNEAIRCSKDLVRDYPKSSYAVDAA 847
Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQGY 261
+ AY D A + + Y +
Sbjct: 848 FSIPMAYANAKKWDLAIQEYRNFIKMYQEDK 878
>gi|238020956|ref|ZP_04601382.1| hypothetical protein GCWU000324_00853 [Kingella oralis ATCC 51147]
gi|237867936|gb|EEP68942.1| hypothetical protein GCWU000324_00853 [Kingella oralis ATCC 51147]
Length = 265
Score = 37.1 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 28/258 (10%), Positives = 65/258 (25%), Gaps = 14/258 (5%)
Query: 19 LYKFALTIFFSI--AVCFLVGWERQSSRDVYLDSVTD----VRYQREVYEKAVLFLKEQN 72
++K L+ F + A C L G ++ + + R E A+ + + ++
Sbjct: 1 MFKQRLSRFVVMCAAACVLAGCVSENPQFTEFKPESKSEKRKNNARIKTELAIQYTQNRD 60
Query: 73 FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI------TQYPE 126
+ A + + +D P +A K ++
Sbjct: 61 YRSAVQAIDGAIQDDPNFEIAWLIRAQVYQHLKVYDKAEENFRHALSMKPDSAEINNNYG 120
Query: 127 SKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
D + + ++ R +
Sbjct: 121 WFICDALKRPNDAIAYFDKALADPTYPSPEIANMNKGICSARAGQIAMAETYFERALQLN 180
Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
E R +L++ + A F+ + + + + A M A
Sbjct: 181 PDFVPVFKERARAHLQQHKNAVADKEFRRYQSRVDRLSADD--LLLGWKIAKANNEMQAA 238
Query: 247 REVVSLIQERYPQGYWAR 264
E + ++ YP
Sbjct: 239 SEYEAQLRMNYPYSPELE 256
>gi|189468200|ref|ZP_03016985.1| hypothetical protein BACINT_04596 [Bacteroides intestinalis DSM
17393]
gi|189436464|gb|EDV05449.1| hypothetical protein BACINT_04596 [Bacteroides intestinalis DSM
17393]
Length = 995
Score = 37.1 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 14/70 (20%), Positives = 31/70 (44%), Gaps = 6/70 (8%)
Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE------AREVVSLIQ 254
+ ++ A F+ ++ + D A+EA +L +AL E A + + +
Sbjct: 615 DRMQDFKRAEAAFERLVREFPDFAQADEAYYQLFLTELALNYYGELPALQRAEKYKAELI 674
Query: 255 ERYPQGYWAR 264
R+P+ +A+
Sbjct: 675 ARFPKSRYAK 684
>gi|148974033|ref|ZP_01811566.1| hypothetical protein VSWAT3_12937 [Vibrionales bacterium SWAT-3]
gi|145965730|gb|EDK30978.1| hypothetical protein VSWAT3_12937 [Vibrionales bacterium SWAT-3]
Length = 656
Score = 37.1 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 28/192 (14%), Positives = 47/192 (24%), Gaps = 14/192 (7%)
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
F + D L A + P + G+
Sbjct: 263 FTEVQFDNSDVEHLASYLDRIATTTEVTKTNNSLNTRVNNGFWLLPFLLLPALGLFRKGV 322
Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
+ + + + Q + ++ Y Q K G
Sbjct: 323 IWCGLAVVLSFSQP--NTAFASPWKTDDQLGYQLYQDEDFQQAAEQFQQQEWK----GIS 376
Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
K G++ AA Q + E A L A D+A E I + P
Sbjct: 377 QYKAGDFEAAEQTLQGLTD--------ESARYNLANAQAQQGKYDQAIEEYQRILQNNPD 428
Query: 260 GYWARYVETLVK 271
+A+ +VK
Sbjct: 429 HEYAKKNLKVVK 440
>gi|315187290|gb|EFU21046.1| Tetratricopeptide TPR_1 repeat-containing protein [Spirochaeta
thermophila DSM 6578]
Length = 918
Score = 37.1 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 23/189 (12%), Positives = 51/189 (26%), Gaps = 1/189 (0%)
Query: 71 QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
+ +A+++F Q R P A ++L A + + V
Sbjct: 263 GRYREAFDWFVQALRIQPGYERALHNIL-HLLTSQEAFFDVEQELSLLLLEFPGLDQLRV 321
Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
Y L + + R++ + + +L
Sbjct: 322 SYAEALFRKGDYDRAEEELRLLEEKGADDPRIPRLLGIISFLHGKEDRAHTYFEHYRRLT 381
Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
+E + + + S A L E ++ L ++EA ++
Sbjct: 382 HREDYLLDLIKTLKDRKEYRAALTRLNEYLSSHPEDRNARLLLGEIHLELGNIEEAFPLL 441
Query: 251 SLIQERYPQ 259
++E P
Sbjct: 442 EKMREETPS 450
>gi|260431106|ref|ZP_05785077.1| tetratricopeptide TPR_2 repeat protein [Silicibacter
lacuscaerulensis ITI-1157]
gi|260414934|gb|EEX08193.1| tetratricopeptide TPR_2 repeat protein [Silicibacter
lacuscaerulensis ITI-1157]
Length = 274
Score = 37.1 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 9/39 (23%), Positives = 17/39 (43%)
Query: 224 EHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
A EA+ L A L +++A + + R+P +
Sbjct: 222 PLAPEALYELGAALGRLGQVEQACITLGEVAARFPDSAF 260
>gi|255033902|ref|YP_003084523.1| OmpA/MotB domain-containing protein [Dyadobacter fermentans DSM
18053]
gi|254946658|gb|ACT91358.1| OmpA/MotB domain protein [Dyadobacter fermentans DSM 18053]
Length = 638
Score = 37.1 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 18/132 (13%), Positives = 33/132 (25%), Gaps = 4/132 (3%)
Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90
+ F + + V VT R R+VY+KA +E+ +A E F + P +
Sbjct: 4 IILFCFALGIFTLQSVSAQDVTLSRTARQVYDKAQKAWQERKLPEATELFEKVLEMEPNS 63
Query: 91 GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150
+ Y + + +
Sbjct: 64 ----YDTHLRLAQVYELQRKPDLTRKHYHKAVALRPDAPQSAPAFQWIGRDHFNAQRYDS 119
Query: 151 DQRATKLMLQYM 162
Q + L
Sbjct: 120 AQFYFEKALPLF 131
>gi|188993917|ref|YP_001928169.1| hypothetical protein PGN_0053 [Porphyromonas gingivalis ATCC 33277]
gi|188995152|ref|YP_001929404.1| hypothetical protein PGN_1288 [Porphyromonas gingivalis ATCC 33277]
gi|188593597|dbj|BAG32572.1| conserved hypothetical protein [Porphyromonas gingivalis ATCC
33277]
gi|188594832|dbj|BAG33807.1| conserved hypothetical protein [Porphyromonas gingivalis ATCC
33277]
Length = 408
Score = 37.1 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 27/229 (11%), Positives = 68/229 (29%), Gaps = 5/229 (2%)
Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
+ ++ + + E+A F+ E+ F +A + +++ + +
Sbjct: 172 SDEDLEEIIGELRAKENTVYSLSEQAKRFMHEKRFEEAAQKWHKLRQMVENDIFYIQQEA 231
Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
+ + GK +L + D + + + + D+
Sbjct: 232 LCTYKSEKPGK---VPALTNALQIMASIKEQTDTETLGITGAINKRLWYETKDESYLDYA 288
Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
++ + + + Y ++ L E ++ E I L
Sbjct: 289 IEMYRKGWTLHQDY-YTGENYALCLEQKSILEKDERHKIHKQVEAEEIRKQIIDIILPTL 347
Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
+ E + A L Y AL + + +E +E+ P+ W
Sbjct: 348 EEEEPEELKWKYATLANCYFALGDVKKEQEYDQKFKEQNPE-DWEIETY 395
>gi|156072334|gb|ABU45489.1| TPR domain protein [Fibrobacter succinogenes subsp. succinogenes
S85]
gi|302325631|gb|ADL24832.1| tetratricopeptide repeat protein [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 1292
Score = 37.1 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 27/211 (12%), Positives = 56/211 (26%), Gaps = 22/211 (10%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
+ ++E A + + KA E F + + + + K +L +A +
Sbjct: 690 PNIDIADKAIFEAAAAYEATNQYKKAAETFMLLPKSYAKSPLTVKGILRAASNYKKDKQP 749
Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
QAA + + S K +RY
Sbjct: 750 VQAAKTFLFITDN--------FPQDSMAFSAIGFAAQTYDSIPDKKQAAITFELAYKRYP 801
Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
+ + Y + AI + ++ +Y + +A +A
Sbjct: 802 QNEETPSFLY--------------SACLSYDEAKMTNEAIRCSKDLVRDYPKSSYAVDAA 847
Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQGY 261
+ AY D A + + Y +
Sbjct: 848 FSIPMAYANAKKWDLAIQEYRNFIKMYQEDK 878
>gi|52140546|ref|YP_086281.1| ABC transporter, substrate-binding protein [Bacillus cereus E33L]
gi|51974015|gb|AAU15565.1| ABC transporter, substrate-binding protein [Bacillus cereus E33L]
Length = 270
Score = 37.1 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 12/70 (17%), Positives = 23/70 (32%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K LT S ++ L + + + L E+ EKA L+++ +
Sbjct: 1 MKKLLLTALISTSIFGLAACGGKDNDEKKLVVGASNVPHAEILEKAKPLLEKKGIELEVK 60
Query: 79 YFNQCSRDFP 88
F
Sbjct: 61 KFQDYVLPNK 70
>gi|308050050|ref|YP_003913616.1| hypothetical protein Fbal_2340 [Ferrimonas balearica DSM 9799]
gi|307632240|gb|ADN76542.1| TPR repeat-containing protein [Ferrimonas balearica DSM 9799]
Length = 348
Score = 37.1 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 26/242 (10%), Positives = 68/242 (28%), Gaps = 35/242 (14%)
Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
++ V L G + V ++ ++AV + ++ A + + +
Sbjct: 17 AVLVLALAGCQS-------APPVATGPNVEQLQKQAVSAQRMGQYNTALKAYLELLDAQ- 68
Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
+ L +Q GK A + ++ + P+ + +
Sbjct: 69 --PDNLEYLYQIGQIQAQLGKNDHAITAFQDVLKVQPDHLPA-----------MTSLALL 115
Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
+ Y+ + + Y + V +G + +
Sbjct: 116 HMARGDNGQARTYLDKAIRLDQKRLYAEDTSIQVQLGESGTQP---WHALDERSPLKAYQ 172
Query: 209 AIPRFQLVLANYSDA-----------EHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
A+ + + A++ A +A+ L +Y + A + +R
Sbjct: 173 ALGILRDLDADFDGAQALYRLVLTLQPSNAKALNNLGYSYYLAGDLIRAETYLRRATQRQ 232
Query: 258 PQ 259
P+
Sbjct: 233 PE 234
>gi|326435520|gb|EGD81090.1| tetratricopeptide protein [Salpingoeca sp. ATCC 50818]
Length = 819
Score = 37.1 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 18/222 (8%), Positives = 45/222 (20%), Gaps = 10/222 (4%)
Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
V + ++ ++ KA E + + + +
Sbjct: 342 KVETLGEKHPSTAETYNNLGNAYARKGDYDKAIELYEKALAIKVETLGEKHPSTAETYNN 401
Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
+ + + I Y + + + + +K
Sbjct: 402 LGSAYASKGD--YDRAIAFYEKDLAITVETLGEKHPSTADTYNNLGNAYYSKGAYDRAIH 459
Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
E+ + + + + R V
Sbjct: 460 FYEKALAITAEALGEKHPSTAQTYNNLGIAYKNKGEYDRAIAFYEQALAITVEVLGKKHP 519
Query: 225 HAEEAMARLVEAYVALALMDEARE--------VVSLIQERYP 258
+ L AY +A E V + E++P
Sbjct: 520 STAQTYNNLGNAYKNKGDYGKAIECYEKARAVYVEALGEKHP 561
>gi|17231265|ref|NP_487813.1| serine/threonine kinase [Nostoc sp. PCC 7120]
gi|17132907|dbj|BAB75472.1| serine/threonine kinase [Nostoc sp. PCC 7120]
Length = 707
Score = 37.1 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 25/203 (12%), Positives = 52/203 (25%), Gaps = 2/203 (0%)
Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
Y K + + +++A +N+ A +L S +A
Sbjct: 466 ESFYNKGLALQSMKEYNEAINAYNKAIEIKSDYERAWYNLGNSLVNLNRYEDAFKAYDKA 525
Query: 118 EEYITQYPESKNVDYVYYLVGMSY-AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
+Y T Y + ++ Y + + + R ++ N Y +
Sbjct: 526 VQYKTDYAIAWLSRGNVLIILRRYPEALESFNQVIKFNPNNYQAWYGRGWSQHQNQRYAE 585
Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
Y + + E+ + A +H E+ A
Sbjct: 586 AIESYKKAATIKPSNYEIWYSLGNSQYILQQYQEAIASYNKAVRYRPKHI-ESWYSRGNA 644
Query: 237 YVALALMDEAREVVSLIQERYPQ 259
+L EA + P
Sbjct: 645 LFSLKQYKEAIASYEQAIKHKPD 667
>gi|84388532|ref|ZP_00991079.1| hypothetical protein V12B01_07046 [Vibrio splendidus 12B01]
gi|84377081|gb|EAP93952.1| hypothetical protein V12B01_07046 [Vibrio splendidus 12B01]
Length = 262
Score = 37.1 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 29/79 (36%), Gaps = 3/79 (3%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
LK+ +Y AI FQ ++ D+ + L + Y A EA + +
Sbjct: 149 YQNAVDMILKQRDYTGAIAAFQKFQKDFPDSTFTPNSHYWLGQLYFAKKQDKEAVKSFAA 208
Query: 253 IQERYPQGYWARYVETLVK 271
+ Y + + LVK
Sbjct: 209 VVS-YKDSN--KRADALVK 224
>gi|71754697|ref|XP_828263.1| intraflagellar transport protein IFT88 [Trypanosoma brucei TREU927]
gi|70833649|gb|EAN79151.1| intraflagellar transport protein IFT88, putative [Trypanosoma
brucei]
Length = 800
Score = 37.1 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 28/200 (14%), Positives = 63/200 (31%), Gaps = 6/200 (3%)
Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
+Y + + + +A + F + + + + + + S + L
Sbjct: 520 EAIYNLGLTAKRLGLYEEALKMFKR-GQSLVDSHEIVYQIADISDLVSSPATSEWFNRLV 578
Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
T + +Y G + + M N Y K
Sbjct: 579 GRVPTDPNILARMGSLYAREGDDSQAFHYYLEAYRYFQVNMDVISWLGAYFVKNEVYDKA 638
Query: 178 ARFYVTVGRNQLAAKEVE--IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
+F+ + Q + + + + +RG+YV A ++ + Y + E + LV
Sbjct: 639 IQFFERASQIQPQEVKWQLMVASCHRRRGDYVQAKRLYEALHRKYPE---NLECLRYLVH 695
Query: 236 AYVALALMDEAREVVSLIQE 255
L+DEA E +++
Sbjct: 696 LCKDAGLIDEANEWFMKVKK 715
>gi|307300473|ref|ZP_07580253.1| tol-pal system protein YbgF [Sinorhizobium meliloti BL225C]
gi|307318338|ref|ZP_07597773.1| tol-pal system protein YbgF [Sinorhizobium meliloti AK83]
gi|306896020|gb|EFN26771.1| tol-pal system protein YbgF [Sinorhizobium meliloti AK83]
gi|306904639|gb|EFN35223.1| tol-pal system protein YbgF [Sinorhizobium meliloti BL225C]
Length = 345
Score = 37.1 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 15/73 (20%), Positives = 31/73 (42%)
Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
++ A +G +G+Y A F ++ + A E + +L + AL + A
Sbjct: 255 DKAADASFWMGEAQYSQGKYSDAAKTFLNAHQSHGKSPKAPEMLLKLGMSLGALDNKETA 314
Query: 247 REVVSLIQERYPQ 259
+ + +RYP+
Sbjct: 315 CATLREVNKRYPK 327
>gi|57242172|ref|ZP_00370112.1| competence lipoprotein (comL) [Campylobacter upsaliensis RM3195]
gi|57017364|gb|EAL54145.1| competence lipoprotein (comL) [Campylobacter upsaliensis RM3195]
Length = 215
Score = 37.1 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 31/212 (14%), Positives = 68/212 (32%), Gaps = 10/212 (4%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K L + I F ++ ++Y + Y + + L++++ KA
Sbjct: 1 MKKNLLILSLII--TFFTACSTKNKDELY------NLSSSQWYTQIIKDLQDKDLEKADT 52
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+++ + + + +L++ A +YQ A +EY ++ SKNVDY YL
Sbjct: 53 HYSGMASEHIADPLLEPTLIILAQAHMDEEEYQLAEFYLDEYNKKFGNSKNVDYTRYLKI 112
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK--GARFYVTVGRNQLAAKEVEI 196
+ + +Q Q + ++ Y N+ Y +
Sbjct: 113 KAKFEAFAVPNRNQALMLQSQQEIDNFLKEYPNTQYKPLVQTMLTKFNIAVFYLDSTIAD 172
Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
R + + + E
Sbjct: 173 LYNRTNRQQSYEIYQEKLQQSEFFKRSIITPE 204
>gi|241758785|ref|ZP_04756898.1| type IV pilus biogenesis/stability protein PilW [Neisseria
flavescens SK114]
gi|319638409|ref|ZP_07993171.1| ftype IV pilus assembly protein [Neisseria mucosa C102]
gi|241320993|gb|EER57206.1| type IV pilus biogenesis/stability protein PilW [Neisseria
flavescens SK114]
gi|317400158|gb|EFV80817.1| ftype IV pilus assembly protein [Neisseria mucosa C102]
Length = 251
Score = 37.1 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 26/254 (10%), Positives = 63/254 (24%), Gaps = 16/254 (6%)
Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
KF + ++ + S ++ + + AV +++ QN+ +A
Sbjct: 1 MKIKFGFALLTALTLSACASSSGPSPKERAIQVSNIKT------QLAVEYMRGQNYRQAT 54
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
E + + +A A + +A + ++ P+S V+ Y
Sbjct: 55 ESIEEALKFNSKNDIAWLV---RAEIYQYLKVRDKAQESFLKALSLKPDSAEVNNNYGWF 111
Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN-----SPYVKGARFYVTVGRNQLAAK 192
+ + Y S + +
Sbjct: 112 LCNQMNAPAESMAYFDKALADPTYPSPFIANMNKGICSARLGQYSLAQAYLERSLAANPQ 171
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV--EAYVALALMDEAREVV 250
+ + + Y +A L+ AL A E
Sbjct: 172 FFPAFKELARTKMMAGNLNDADYYFRQYQSKVDVLQADDLLLGWRLATALGNKHAAYEYE 231
Query: 251 SLIQERYPQGYWAR 264
+ ++ +P +
Sbjct: 232 AQLRANFPYSDELQ 245
>gi|261401250|ref|ZP_05987375.1| type IV pilus biogenesis/stability protein PilW [Neisseria
lactamica ATCC 23970]
gi|269208733|gb|EEZ75188.1| type IV pilus biogenesis/stability protein PilW [Neisseria
lactamica ATCC 23970]
Length = 253
Score = 37.1 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 30/248 (12%), Positives = 67/248 (27%), Gaps = 8/248 (3%)
Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
F L+ S+ + +G S R + V + + A+ +++ Q++ +A
Sbjct: 3 FKLSKRISLLLVLALGACSTSYRPSRAEKANQVSNIKT--QLAMEYMRGQDYRQATASIE 60
Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
+ P +A + Q + I N +Y ++L G
Sbjct: 61 DALKSDPKNELAWLVRAE-IYQYLKVNDKAQESFRHALSIKPDSAEINNNYGWFLCGRLN 119
Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG---R 198
+D+ +G + A + + +
Sbjct: 120 RPAESMAYFDKALADPTYPTPYIANLNKGICSAKQGQFGLAEAYLERSLASQPQFPPAFK 179
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV--EAYVALALMDEAREVVSLIQER 256
+ + Y +A L+ + AL A E + +Q
Sbjct: 180 ELARTKMLAGQLGDADYYFKKYQSRVEVLQADDLLLGWKIAKALGNAQAAYEYEAQLQAN 239
Query: 257 YPQGYWAR 264
+P +
Sbjct: 240 FPYSEELQ 247
>gi|225376839|ref|ZP_03754060.1| hypothetical protein ROSEINA2194_02481 [Roseburia inulinivorans DSM
16841]
gi|225211335|gb|EEG93689.1| hypothetical protein ROSEINA2194_02481 [Roseburia inulinivorans DSM
16841]
Length = 460
Score = 37.1 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 30/80 (37%), Gaps = 4/80 (5%)
Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
KE K + V+A+ + + NY + A+ L +AY M+ A+
Sbjct: 376 YKEGYDAYSGKKYDDAVSALSKVVEMDENYENG----NALYYLAQAYRKNEDMENAKIYY 431
Query: 251 SLIQERYPQGYWARYVETLV 270
+ E YP A + +
Sbjct: 432 QKVVELYPNTERAANSQNYL 451
>gi|254417473|ref|ZP_05031213.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
PCC 7420]
gi|196175738|gb|EDX70762.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
PCC 7420]
Length = 355
Score = 37.1 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 25/231 (10%), Positives = 56/231 (24%), Gaps = 8/231 (3%)
Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
+V + +V Y ++ ++ F +A +Q P + ++
Sbjct: 13 NVSYNRPLEVTTHEAWYNLGIILIQSGQFEEAIATVDQVLEREPDLYQLWYNRGIALDKA 72
Query: 105 YSAGKYQQAASLGEEYI---TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
+ + + ++ V + +
Sbjct: 73 GRHEEAIASYDKAVKLQPDFYPAWYNRGNALVNLKQYEAAKLSYDQALNLKPNLHQAWYN 132
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
++ + + G ++ ++ AI + L
Sbjct: 133 RGNVLFSLQRFLEAITSYQDALKIKPDKYEAWYNQGHAWVHLKQFQEAIASYDEALKIKP 192
Query: 222 DAEHAEEAMARLVEAYVALALMDEA-REVVSLIQERYPQ-GYWARYVETLV 270
D A EA A L EA ++ +Y Q W LV
Sbjct: 193 D---AHEAWNNRGGALYRLDRFPEAVASYNEALKLKYQQPSSWYYRGNALV 240
>gi|115376734|ref|ZP_01463961.1| tetratricopeptide repeat domain protein [Stigmatella aurantiaca
DW4/3-1]
gi|115366283|gb|EAU65291.1| tetratricopeptide repeat domain protein [Stigmatella aurantiaca
DW4/3-1]
Length = 1190
Score = 37.1 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 10/76 (13%), Positives = 27/76 (35%)
Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
K + + A+ ++ ++ Y E ++E + L + +A
Sbjct: 140 KSEKAELIARSKEYGKHAVEQYTKIVQEYPSFERSDEVLFFLGNFLMEDGQDRKALVAYK 199
Query: 252 LIQERYPQGYWARYVE 267
+ E++P+ + V
Sbjct: 200 RLVEKFPKSKFLPDVY 215
Score = 35.9 bits (80), Expect = 6.2, Method: Composition-based stats.
Identities = 11/104 (10%), Positives = 34/104 (32%), Gaps = 3/104 (2%)
Query: 166 VERYTNSPYVKG---ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
V + Y + + + ++ ++ A + + ++ +
Sbjct: 654 VNEWARKFYANDKLAVGKFREDLSKLIEQSSFALVAQLEEKKQFAKAADAYLAFVKDFPE 713
Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
A++A+ + ++D A EV + +YP+ +
Sbjct: 714 TTIADQALYNASVDFFKAKMLDRAIEVRQSLISQYPRSRFVPDS 757
>gi|331002325|ref|ZP_08325843.1| hypothetical protein HMPREF0491_00705 [Lachnospiraceae oral taxon
107 str. F0167]
gi|330410141|gb|EGG89575.1| hypothetical protein HMPREF0491_00705 [Lachnospiraceae oral taxon
107 str. F0167]
Length = 444
Score = 37.1 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 9/41 (21%), Positives = 18/41 (43%)
Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
EA + +Y A+ ++ A + + I YP +A +
Sbjct: 400 EAKFKKALSYKAMGDVETANNLFTEIITNYPDDKFANESKK 440
>gi|301056473|ref|YP_003794684.1| ABC transporter substrate-binding protein [Bacillus anthracis CI]
gi|300378642|gb|ADK07546.1| ABC transporter, substrate-binding protein [Bacillus cereus
biovar anthracis str. CI]
Length = 270
Score = 37.1 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 12/70 (17%), Positives = 23/70 (32%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K LT S ++ L + + + L E+ EKA L+++ +
Sbjct: 1 MKKLLLTALISTSIFGLAACGGKDNDEKKLVVGASNVPHAEILEKAKPLLEKKGIELEVK 60
Query: 79 YFNQCSRDFP 88
F
Sbjct: 61 KFQDYVLPNK 70
>gi|281423681|ref|ZP_06254594.1| putative TPR domain protein [Prevotella oris F0302]
gi|281402233|gb|EFB33064.1| putative TPR domain protein [Prevotella oris F0302]
Length = 1007
Score = 37.1 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 8/71 (11%), Positives = 20/71 (28%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ + + ++ +Y + +EA L Y + A +
Sbjct: 578 FHSGIIFKDRLDNLDLSEKTLLRLIHDYPNFAQIDEAFYHLYLLYARRNELTRAESYLDR 637
Query: 253 IQERYPQGYWA 263
+ + P W
Sbjct: 638 LHKECPDSKWT 648
>gi|266624205|ref|ZP_06117140.1| putative tetratricopeptide repeat-containing domain protein
[Clostridium hathewayi DSM 13479]
gi|288863960|gb|EFC96258.1| putative tetratricopeptide repeat-containing domain protein
[Clostridium hathewayi DSM 13479]
Length = 267
Score = 37.1 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 29/249 (11%), Positives = 66/249 (26%), Gaps = 28/249 (11%)
Query: 17 YQLYKFALTIFFS-IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
Y K + I + + + VG + ++ Y D + L ++
Sbjct: 11 YNKKKIKVLILTAGLCMGLTVGCGKSENKYTYRD-------------AGIEALNAGDYES 57
Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
A F++ A V + + + + + + + Y +
Sbjct: 58 AIASFDEAINA-SNALVGAFDIDVLKYRAEAEYRAADYQAASDTYGILIQVDQERPEYLN 116
Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
+ +S AQ + + + + GA + A
Sbjct: 117 MRCVSRAQNGDLNGALEDYKRASELDTEKNAPGRAEALLAAGAALENQGAAAEAMALYES 176
Query: 196 IGRYYLKRGEYVAAIPRFQLVLANY-------------SDAEHAEEAMARLVEAYVALAL 242
++ E + + +Y DA + + AY
Sbjct: 177 AKAEGIESAELYNRMGLCKFGEKDYETAITCFAQGLLKPDAASVPDLIYNQAVAYEYKGD 236
Query: 243 MDEAREVVS 251
D+ARE++
Sbjct: 237 FDKARELME 245
>gi|226951011|ref|YP_002806102.1| putative phage head-tail adaptor [Clostridium botulinum A2 str.
Kyoto]
gi|226842735|gb|ACO85401.1| putative phage head-tail adaptor [Clostridium botulinum A2 str.
Kyoto]
Length = 378
Score = 37.1 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 19/185 (10%), Positives = 52/185 (28%), Gaps = 1/185 (0%)
Query: 14 AWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNF 73
+ K + L G +++ D + + D++ ++ + L E+N
Sbjct: 1 MYYRNFAKKIIIFLIFTTTISLFGC-KKNKEDTKVTNDFDIKIATNLFNSYMESLIEENM 59
Query: 74 SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
A + +++ + + + + + A + + E
Sbjct: 60 EGAQKLYSKKLKKDKIKKENKDVKIKGYTTEEINEVGKSALFIAKVVSVNVKEPYTSVEE 119
Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
Y + + + + K +RI R N+ + T+ A +
Sbjct: 120 YKIRVIKEENEYKIDEVNISMDKEAFTKNNRIRYRNKNNVKTELIIKPSTLPDYSYAKDD 179
Query: 194 VEIGR 198
Sbjct: 180 KANIE 184
>gi|168181024|ref|ZP_02615688.1| putative phage head-tail adaptor [Clostridium botulinum NCTC 2916]
gi|182668178|gb|EDT80157.1| putative phage head-tail adaptor [Clostridium botulinum NCTC 2916]
Length = 375
Score = 37.1 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 19/185 (10%), Positives = 52/185 (28%), Gaps = 1/185 (0%)
Query: 14 AWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNF 73
+ K + L G +++ D + + D++ ++ + L E+N
Sbjct: 1 MYYRNFAKKIIIFLIFTTTISLFGC-KKNKEDTKVTNDFDIKIATNLFNSYMESLIEENM 59
Query: 74 SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
A + +++ + + + + + A + + E
Sbjct: 60 EGAQKLYSKKLKKDKIKKENKDVKIKGYTTEEINEVGKSALFIAKVVSVNVKEPYTSVEE 119
Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
Y + + + + K +RI R N+ + T+ A +
Sbjct: 120 YKIRVIKEENEYKIDEVNISMDKEAFTKNNRIRYRNKNNVKTELIIKPSTLPDYSYAKDD 179
Query: 194 VEIGR 198
Sbjct: 180 KANIE 184
>gi|332709574|ref|ZP_08429534.1| murein transglycosylase family protein [Lyngbya majuscula 3L]
gi|332351607|gb|EGJ31187.1| murein transglycosylase family protein [Lyngbya majuscula 3L]
Length = 792
Score = 37.1 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 23/221 (10%), Positives = 70/221 (31%), Gaps = 2/221 (0%)
Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
D + ++ A+ + K++ +++A + + + ++L + +
Sbjct: 289 KSVDDKNRAIIQPKDWEAIALAYWKDRKYAQASAAYGNAKPLPKHSYLGARALQYAQKPR 348
Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
+ Y++ + + + + + RA + +L
Sbjct: 349 AAKLAYKKMVEEFPDAKETALAYLQLAELEPPIDKIPYLDQVIDRFPDRAAEALLAKAKT 408
Query: 165 IVERYTNSPYVKGARFYVTVGRNQLA--AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
+ + + + + + + N A ++ + + G+ + A Q +L +
Sbjct: 409 LEQLKSPNAAEQAYQLLIDNYSNSDAAADYRWQMAQEAAQNGDILTAWHNVQPILKDNPH 468
Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
+ A A + L EA + + Q Y+A
Sbjct: 469 SLIARRAGFWSGKWATQLGRKQEAEAAFKQVITNHIQSYYA 509
>gi|322820896|gb|EFZ27381.1| hypothetical protein TCSYLVIO_6413 [Trypanosoma cruzi]
Length = 564
Score = 37.1 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 17/206 (8%), Positives = 43/206 (20%), Gaps = 15/206 (7%)
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
Y + L + A F + + +A + ++ E
Sbjct: 245 YNAGLCALLRGEYDSAITCFLSVQEFMKKSPLFWVRFAEAAVGKLQTETRKRDMEEYERM 304
Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM--------------LQYMSRIV 166
+ E + K + ++
Sbjct: 305 QNHFSEQLRNGKMLPNYEYLILPGAAICQGPLADPKDSSVSTALETLVCSTIHNALILLL 364
Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
+ + A + + + V + + +
Sbjct: 365 PQGHTAASAMEAFPHNVQLIQFALFYWCALEIFRNNYTVVVNVGYDLLSLHERRPLSPNL 424
Query: 227 EEAMA-RLVEAYVALALMDEAREVVS 251
A+ VEA + L + A +V+
Sbjct: 425 HAALLSYTVEALIHLNEPERALKVLR 450
>gi|295706702|ref|YP_003599777.1| tetratricopeptide repeat protein [Bacillus megaterium DSM 319]
gi|294804361|gb|ADF41427.1| tetratricopeptide repeat protein [Bacillus megaterium DSM 319]
Length = 219
Score = 37.1 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 23/212 (10%), Positives = 54/212 (25%), Gaps = 6/212 (2%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
+ + +++E F +A + F++ D P + + + + E
Sbjct: 6 QLGIQYMQEGKFEEAAKTFSEAIEDNPKDPIVYVNFGNLLAAVSEMDRALKFYERAIELD 65
Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVP---YDQRATKLMLQYMSRIVERYTNSPYVKGA 178
+ + Y Q + + + +
Sbjct: 66 EETATAYYGAGNIYFNAEQLEQAKHYFDLAIKKGLDSSDAYFMLGLTLFHMEEIRFAMPY 125
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
+ + G + AI F V+ + +A L AY
Sbjct: 126 LQRAVELNEHDVEAKFQYGLCLAQLEMVDEAIAEFLKVVNQEPE---HADAFYNLGVAYA 182
Query: 239 ALALMDEAREVVSLIQERYPQGYWARYVETLV 270
D+A E++ P A + ++
Sbjct: 183 MKDDKDKAIEMLDEALNVQPDHVMAANAKQVL 214
>gi|256772634|emb|CAX46402.1| putative SPINDLY protein [Rosa lucieae]
Length = 916
Score = 37.1 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 27/226 (11%), Positives = 56/226 (24%), Gaps = 15/226 (6%)
Query: 48 LDSVTDVRYQR-EVY-EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
+ R E Y V++ + A + +C P +A+ ++ ++
Sbjct: 216 YEKAALERPMYTEAYCNMGVIYKNRGDLESAIACYERCLAVSPNFEIAKNNMAIALTDLG 275
Query: 106 SAGK----------YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
+ K Y + A + + V Y L +
Sbjct: 276 TKVKLEGDIDQGIAYYKKALYYNWHYADAMYNLGVAYGEMLKFDMAIVFYELAFHFNPHC 335
Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
+ I + N + + +G Y +G+ AA +
Sbjct: 336 AEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGKMDAAASMIEK 395
Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
+ EA L Y + A + + P
Sbjct: 396 AIIANPTY---AEAYNNLGVLYRDAGNISMAIDAYEQCLKIDPDSR 438
>gi|237716376|ref|ZP_04546857.1| conserved hypothetical protein [Bacteroides sp. D1]
gi|262407978|ref|ZP_06084526.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294644261|ref|ZP_06722030.1| putative lipoprotein [Bacteroides ovatus SD CC 2a]
gi|294807971|ref|ZP_06766750.1| putative lipoprotein [Bacteroides xylanisolvens SD CC 1b]
gi|298481362|ref|ZP_06999555.1| endo-beta-N-acetylglucosaminidase F2 [Bacteroides sp. D22]
gi|299145473|ref|ZP_07038541.1| endo-beta-N-acetylglucosaminidase F2 [Bacteroides sp. 3_1_23]
gi|229444023|gb|EEO49814.1| conserved hypothetical protein [Bacteroides sp. D1]
gi|262354786|gb|EEZ03878.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|292640425|gb|EFF58674.1| putative lipoprotein [Bacteroides ovatus SD CC 2a]
gi|294444855|gb|EFG13543.1| putative lipoprotein [Bacteroides xylanisolvens SD CC 1b]
gi|298272566|gb|EFI14134.1| endo-beta-N-acetylglucosaminidase F2 [Bacteroides sp. D22]
gi|298515964|gb|EFI39845.1| endo-beta-N-acetylglucosaminidase F2 [Bacteroides sp. 3_1_23]
Length = 379
Score = 37.1 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 19/211 (9%), Positives = 49/211 (23%), Gaps = 12/211 (5%)
Query: 19 LYKFAL--TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76
+ K L + S+A L+G + + + V + Y A+ K+ + A
Sbjct: 1 MKKIYLLYIVLISLATTSLIGCSDWTESEAKTFPESIVSDE---YYAALRAYKQTDHQVA 57
Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA-------SLGEEYITQYPESKN 129
+ +F S + + + + S + G + ++
Sbjct: 58 FGWFGGWSGEGAYMKSSLAGIPDSVDIVSIWGNWSNITEAQKKDLEFCQQVKGTRFTMCF 117
Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
+ + K + +N ++ +
Sbjct: 118 IIRSVGDQITPQNIRENWENMGFSSEKEAVNDFWGWPSDESNKEAIEASIRKYASAIADT 177
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220
K G + +
Sbjct: 178 VNKYGYDGFDIDYEPNFGNPGNIVDEDDRMF 208
>gi|225866956|ref|YP_002752334.1| putative ABC transporter, substrate-binding protein [Bacillus
cereus 03BB102]
gi|300119652|ref|ZP_07057194.1| putative ABC transporter, substrate-binding protein [Bacillus
cereus SJ1]
gi|225788690|gb|ACO28907.1| putative ABC transporter, substrate-binding protein [Bacillus
cereus 03BB102]
gi|298722947|gb|EFI63847.1| putative ABC transporter, substrate-binding protein [Bacillus
cereus SJ1]
Length = 270
Score = 37.1 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 13/70 (18%), Positives = 23/70 (32%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K LT S ++ L + + + L E+ EKA L+++ E
Sbjct: 1 MKKLLLTALISTSIFGLAACGGKDNDEKKLVVGASNVPHAEILEKAKPLLEKKGIELKVE 60
Query: 79 YFNQCSRDFP 88
F
Sbjct: 61 KFQDYVLPNK 70
>gi|260811311|ref|XP_002600366.1| hypothetical protein BRAFLDRAFT_66599 [Branchiostoma floridae]
gi|229285652|gb|EEN56378.1| hypothetical protein BRAFLDRAFT_66599 [Branchiostoma floridae]
Length = 1587
Score = 37.1 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 20/222 (9%), Positives = 62/222 (27%), Gaps = 19/222 (8%)
Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
+ ++ ++++ + ++ KA YF Q + + A
Sbjct: 431 KRVYGTNHPNVATSLHNIGLVWVDKGDYQKAISYFEQALQIRNTLYGHTSAHSDIAASFL 490
Query: 106 SAGKYQQAASLGEEYITQYP---ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
+ G ++ I + + ++ + + + Y+
Sbjct: 491 ALGTAWHGFGNHQKAIIYKELALNMHRIVFGDTHPKIAKSLDNLGASWIYQDRNQAHIYL 550
Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY-- 220
+ + + R A IG + + E+ A ++ L +
Sbjct: 551 QQGL---------EMTRAIFGNAHPSTAYALNNIGSVWWRSEEHEKAFTCYEEALIIFRR 601
Query: 221 ---SDAEHAEEA--MARLVEAYVALALMDEAREVVSLIQERY 257
+ H++ A + L + + +A + + +
Sbjct: 602 VHGPSSAHSDIATSLYNLGTVWGKMGDHRKAMKFFEEALQMF 643
>gi|78189658|ref|YP_379996.1| TPR repeat-containing protein [Chlorobium chlorochromatii CaD3]
gi|78171857|gb|ABB28953.1| TPR repeat [Chlorobium chlorochromatii CaD3]
Length = 226
Score = 37.1 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 21/180 (11%), Positives = 48/180 (26%), Gaps = 7/180 (3%)
Query: 12 FEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQ 71
F+ A + K + A L + ++ + + + +E
Sbjct: 30 FKHQALRRIKKGALLLCIFAATTLTACSNNELEKLQQEAWKNPNDAALTLQLGYKYAQEG 89
Query: 72 NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
+ +A E F + P A ++L +AF Q+ S Y Q+ E D
Sbjct: 90 RYMEANESFQKVLALDPKRDEALQALGATAFR-------QKQYSQAISYFQQHLERAPAD 142
Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
+ ++ + + ++ + N +
Sbjct: 143 SARLYNLGNAYMQLKQYDKATELYNKAIDNSTAFIDAHYNLAVCYAKTGRRNEAQAIYEW 202
>gi|327190097|gb|EGE57209.1| hypothetical protein RHECNPAF_46003 [Rhizobium etli CNPAF512]
Length = 354
Score = 37.1 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 22/200 (11%), Positives = 48/200 (24%), Gaps = 5/200 (2%)
Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ-YSAGKYQQ 112
+Y Y A+L + +A ++ Q + P A L +
Sbjct: 150 PQYPEAHYNFAILLEETGRPDEAAAHYRQALKCRPDHVDALLRLAGLFDEWGDQFEAHHH 209
Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
N G + A Q + + + +
Sbjct: 210 FREALRLRPGFAEAHNNFGVFLERNGDAQAAESHYRQALQLRSDYAEAHYNYAMLLEGRD 269
Query: 173 PYVKGARFYVTVGR-NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231
+ + + A +G ++G A + + D +A
Sbjct: 270 VEAAESHYRAALSSLPMYAEAHNNLGVLLHEKGALTEARSHYLTAIRLRPDDPQTYRNLA 329
Query: 232 RLVEAYVALALMDEAREVVS 251
L+ A + ++A
Sbjct: 330 LLLAA---MGEEEQADRYAR 346
>gi|326797333|ref|YP_004315153.1| hypothetical protein Marme_4117 [Marinomonas mediterranea MMB-1]
gi|326548097|gb|ADZ93317.1| Tetratricopeptide TPR_1 repeat-containing protein [Marinomonas
mediterranea MMB-1]
Length = 295
Score = 37.1 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 10/77 (12%), Positives = 23/77 (29%), Gaps = 3/77 (3%)
Query: 12 FEAWAYQLYKFALTIFFSIAVCFLVGWER---QSSRDVYLDSVTDVRYQREVYEKAVLFL 68
+ ++F ++ + L G + V ++ + E + A L
Sbjct: 3 LIKNTHNSFRFGSLTATALLLVMLAGCSSQVIKDGEPVIENAPYEAESAEEALKLAHLLR 62
Query: 69 KEQNFSKAYEYFNQCSR 85
+ AYE +
Sbjct: 63 DNGRYKAAYEVYENMDE 79
>gi|299134180|ref|ZP_07027373.1| tol-pal system protein YbgF [Afipia sp. 1NLS2]
gi|298590927|gb|EFI51129.1| tol-pal system protein YbgF [Afipia sp. 1NLS2]
Length = 343
Score = 37.1 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 29/66 (43%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ +G +R +Y A F V + Y + A +AM RL E+ AL D A
Sbjct: 259 QYWLGESLYQRKKYREAAEAFLAVTSKYDKSAKAPDAMLRLGESLAALKEKDAACAAFGE 318
Query: 253 IQERYP 258
+ +YP
Sbjct: 319 VMRKYP 324
>gi|268315734|ref|YP_003289453.1| TPR repeat-containing protein [Rhodothermus marinus DSM 4252]
gi|262333268|gb|ACY47065.1| TPR repeat-containing protein [Rhodothermus marinus DSM 4252]
Length = 465
Score = 37.1 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 21/223 (9%), Positives = 53/223 (23%), Gaps = 9/223 (4%)
Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
D Y + ++ + + +A E ++ G A + + +
Sbjct: 204 DPYSADAWYNRGIVLNRMGRYREAVESYDYAIAIQEDFGSAWYNRGNALTNLGDLRGAIE 263
Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP---YDQRATKLMLQYMSRIVERY 169
+ E P + + Y Y I+ + A + +
Sbjct: 264 SYEKVLEIEGGDPATYYNIALAYEELQEYETAIQYFQLALEEDPAYAEAWYGLGCCYDAL 323
Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
+ + + A+ ++ V+ +A
Sbjct: 324 ERFEEAIACMERAVTLQPETSEFWYAKADCEYNARRLQDALQSYRRVIEL---DPQNRDA 380
Query: 230 MARLVEAYVALALMDEA-REVVSLIQERYPQGYWA-RYVETLV 270
E + ++EA + + P R L+
Sbjct: 381 WLDYAETLLEAGYVEEALQAYRQALTLN-PDARAYIRQARALL 422
>gi|218439798|ref|YP_002378127.1| lytic transglycosylase catalytic [Cyanothece sp. PCC 7424]
gi|218172526|gb|ACK71259.1| Lytic transglycosylase catalytic [Cyanothece sp. PCC 7424]
Length = 724
Score = 37.1 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 32/243 (13%), Positives = 74/243 (30%), Gaps = 2/243 (0%)
Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85
+ + + E RD + + + + + + A + + + R
Sbjct: 203 LMLLLVKHNIFAPEINEVRDRLVKDYSQQLTPEDWEAIGNGYWEIGQYENAAKAYYKAPR 262
Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
+ L ++ + YQQ + + +
Sbjct: 263 TPVNLYRYGRGLHINGKKAQAKQAYQQLLREFPDAPETGMGIMRLVSLSESREALGYLDY 322
Query: 146 RDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG--RNQLAAKEVEIGRYYLKR 203
+ Q+A +L+ + + + + K + + A ++ + Y +
Sbjct: 323 AINKFPQQAPDALLKKAEILDQLGSKTSASKARQQLLDQYGSSETAAEYRWKVAKSYGDK 382
Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
GE+V A Q + SD A +A + + L +AR+ R+PQ Y+A
Sbjct: 383 GEFVKAWEWAQPITIKASDTNVAPKAAYWIGKWAQKLNRPQDARDAFLHTLGRHPQSYYA 442
Query: 264 RYV 266
Sbjct: 443 WRA 445
>gi|153852716|ref|ZP_01994153.1| hypothetical protein DORLON_00135 [Dorea longicatena DSM 13814]
gi|149754358|gb|EDM64289.1| hypothetical protein DORLON_00135 [Dorea longicatena DSM 13814]
Length = 454
Score = 37.1 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 10/42 (23%), Positives = 16/42 (38%)
Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
AM L ++Y D+A I E+Y A + +
Sbjct: 400 AMLLLAQSYEKQGKQDKANTYYQKIIEKYNGTEAATEAQNAL 441
>gi|145520040|ref|XP_001445881.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124413347|emb|CAK78484.1| unnamed protein product [Paramecium tetraurelia]
Length = 1723
Score = 37.1 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 20/215 (9%), Positives = 65/215 (30%), Gaps = 11/215 (5%)
Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
++Y+ A + +++++ KA E + + + + A + +
Sbjct: 1257 NMTGEDLYQSAQTWEEQRDYLKAIEIYLEVTPQNTQSEDVMTRAWERAIQIAANYDKDKY 1316
Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
+ + + E K ++ YL Y Q + +++++ +
Sbjct: 1317 PRIVQIVCKRLIEIKKLETAAYLYEQVGQYQEAVTTYVQGREFEKAKQVAQLINNKELNT 1376
Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRY-----YLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
+ + + ++ + + + E+ +
Sbjct: 1377 KLMDYITKEQRKYGASTGQANVMIETGDVAAAMEMLAQKNDWGQCLQLADKH-GVEYLNK 1435
Query: 229 AMARLVEAYVALALMDEAREVVS-----LIQERYP 258
+ R V+ + E + ++ +IQ+ YP
Sbjct: 1436 YLMRYVKITMQQGRFSETIQSLATYGMPIIQQNYP 1470
>gi|261345156|ref|ZP_05972800.1| lipoprotein NlpI [Providencia rustigianii DSM 4541]
gi|282566847|gb|EFB72382.1| lipoprotein NlpI [Providencia rustigianii DSM 4541]
Length = 305
Score = 36.7 bits (82), Expect = 3.1, Method: Composition-based stats.
Identities = 37/262 (14%), Positives = 70/262 (26%), Gaps = 26/262 (9%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYL------------------------DSVTDVRY 56
+ + + ++ ++G + R + S+TD Y
Sbjct: 13 RTLVRVLSALIFFIIIGCSNKDWRKNEVFAVPLQPSLQQEVILARMEQILASRSLTDDEY 72
Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
+ +YE+ VL+ + A F+ P L + + +A
Sbjct: 73 AQLLYERGVLYDSLGLRALARNDFSTALSIRPDIPEIFNFLGIYFTQAGNYDAAYEAFDS 132
Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRD--VPYDQRATKLMLQYMSRIVERYTNSPY 174
E Y ++ + G Y D Y +VE+ +
Sbjct: 133 VLELDPTYNFARMNRGISLYYGGRYKLAQDDLLAYYQIDPNDPFRTLWLYLVEKDIDPRM 192
Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234
+ + + Y E + N S AEH E L
Sbjct: 193 AQDNLAARYDQAEKGQWGWNIVEFYLGNINETTLMERLKETSTDNTSLAEHLSETNFYLG 252
Query: 235 EAYVALALMDEAREVVSLIQER 256
+ Y++L D A + L
Sbjct: 253 KHYLSLGDKDSATALFKLTVAN 274
>gi|254503302|ref|ZP_05115453.1| tol-pal system protein YbgF, putative [Labrenzia alexandrii DFL-11]
gi|222439373|gb|EEE46052.1| tol-pal system protein YbgF, putative [Labrenzia alexandrii DFL-11]
Length = 270
Score = 36.7 bits (82), Expect = 3.1, Method: Composition-based stats.
Identities = 11/76 (14%), Positives = 26/76 (34%)
Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243
A + +G L + + A F ++ + +++ +L + L
Sbjct: 176 PDNQLAANAQYWLGESLLAQQNFREAADAFLKTYRDHPGNSKSPDSLLKLGVSLRGLGET 235
Query: 244 DEAREVVSLIQERYPQ 259
D A S + ++P
Sbjct: 236 DVACATFSELLSKFPN 251
>gi|126733591|ref|ZP_01749338.1| hypothetical protein RCCS2_05529 [Roseobacter sp. CCS2]
gi|126716457|gb|EBA13321.1| hypothetical protein RCCS2_05529 [Roseobacter sp. CCS2]
Length = 271
Score = 36.7 bits (82), Expect = 3.1, Method: Composition-based stats.
Identities = 8/64 (12%), Positives = 23/64 (35%)
Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
A + + A +A+ +L + + +A ++ + R+P +
Sbjct: 203 EAARAYLEAFSGDPTGPKAPDALFKLGSSLGKIGQTQDACLTLAEVNVRFPGNPAVVDAQ 262
Query: 268 TLVK 271
T ++
Sbjct: 263 TEMQ 266
>gi|186685148|ref|YP_001868344.1| hypothetical protein Npun_F5064 [Nostoc punctiforme PCC 73102]
gi|186467600|gb|ACC83401.1| Tetratricopeptide TPR_2 repeat protein [Nostoc punctiforme PCC
73102]
Length = 307
Score = 36.7 bits (82), Expect = 3.1, Method: Composition-based stats.
Identities = 25/218 (11%), Positives = 54/218 (24%), Gaps = 9/218 (4%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
++ + + + + ++ A F Q ++ P A +L ++
Sbjct: 40 KSNGKTAIDWLNQGLQAIQAGKVKDAIAAFKQAAKLDPTLAPAYYNLGLAYRQTGQLQPS 99
Query: 111 QQAASLGEEY---ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
A + + + ++ + E
Sbjct: 100 ADAFYRATQADPKFAPAFANLGGALLEGNNLQLANDYLQRALELDPKLGFAHYNFGLVRE 159
Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
+ + + IG YL++G+ A F +
Sbjct: 160 QQGDCEKAIASFKQAIEYSKNAPEPPYHIGMCYLQQGKLDRARDAFNQAVKINPKYP--- 216
Query: 228 EAMARLVEAYVALALMDEAREVVSLIQE---RYPQGYW 262
EA L + + EA E E YP Y+
Sbjct: 217 EAYYNLGSIWFQQNKLQEALEAFRKSAEANSNYPNAYY 254
>gi|316932668|ref|YP_004107650.1| tol-pal system protein YbgF [Rhodopseudomonas palustris DX-1]
gi|315600382|gb|ADU42917.1| tol-pal system protein YbgF [Rhodopseudomonas palustris DX-1]
Length = 342
Score = 36.7 bits (82), Expect = 3.1, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 32/84 (38%)
Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
A + +G + +R Y A F V + + A A +A+ RL +
Sbjct: 241 MRNFAQKYPDNPLTADAQYWLGESFFQRQMYRDAAEAFLAVTSKHEKAGKAPDALLRLGQ 300
Query: 236 AYVALALMDEAREVVSLIQERYPQ 259
+ AL + A + I +YPQ
Sbjct: 301 SLSALKEKEAACAALGEIGRKYPQ 324
>gi|256027367|ref|ZP_05441201.1| hypothetical protein PrD11_05146 [Fusobacterium sp. D11]
gi|289765335|ref|ZP_06524713.1| conserved hypothetical protein [Fusobacterium sp. D11]
gi|289716890|gb|EFD80902.1| conserved hypothetical protein [Fusobacterium sp. D11]
Length = 378
Score = 36.7 bits (82), Expect = 3.1, Method: Composition-based stats.
Identities = 16/215 (7%), Positives = 55/215 (25%), Gaps = 2/215 (0%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K L + +++ L + ++ + + + + +E F++ +
Sbjct: 1 MKKIGLIVVLTLSFLLLTNCNKDEKKETIAVEYENKNPKIKFSDDTCKLFEE--FAENKK 58
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+ + + + K + + I + +
Sbjct: 59 EIMEKLKTLNKDEANKLYEQYVEDNENILYKIVEVTEKFLDSIYYGSAEEQFTEKDWNDT 118
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
+D + ++ + + + Y+ +
Sbjct: 119 NKILNKYDLELWDIGEGMVTIRELPHLYYDIFKDYVTDDYKEYLKIWAKDSEELYQADAG 178
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
+ E I R++ L Y ++ + A L
Sbjct: 179 LSISFEELGDRIARWENFLNKYPNSTLKPKVTALL 213
>gi|255065154|ref|ZP_05317009.1| HemY family protein [Neisseria sicca ATCC 29256]
gi|255050575|gb|EET46039.1| HemY family protein [Neisseria sicca ATCC 29256]
Length = 407
Score = 36.7 bits (82), Expect = 3.1, Method: Composition-based stats.
Identities = 38/279 (13%), Positives = 78/279 (27%), Gaps = 11/279 (3%)
Query: 1 MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV 60
+ V+G+ + A+ L + + F+VG +R + R
Sbjct: 28 VYIVVGQVMMRVNLHAFILGLVLFVVTLYFLIKFIVGLMNIPARMQRFGTARKGRQAAVA 87
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
A L E F KA + + + +L++ A ++ ++
Sbjct: 88 LNSAGLAFFEGRFEKAEQEAAKVLENKEAGDNRNLALMLGAHAADQMENFELRDHYLKDI 147
Query: 121 ITQYPESK--------NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
+ + + + ++L + +
Sbjct: 148 EKLPNKQQLSRYLLLAESALGRRDYPTALENLNAAARIHPNLSRLARLQLRYAFDHGDAE 207
Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232
+ + + VG E Y + + + L +A A+E
Sbjct: 208 DVLAKSEKLMKVGAINDFEAEQYQSWAYRRLLAEASDATGLKTCLKRIPEALKADELCVA 267
Query: 233 LVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+ E Y L L EA + V YPQ +E V+
Sbjct: 268 IAEKYERLGLYTEAVKWVRQY---YPQNRRPELLEAFVE 303
>gi|212709940|ref|ZP_03318068.1| hypothetical protein PROVALCAL_00990 [Providencia alcalifaciens DSM
30120]
gi|212687452|gb|EEB46980.1| hypothetical protein PROVALCAL_00990 [Providencia alcalifaciens DSM
30120]
Length = 305
Score = 36.7 bits (82), Expect = 3.1, Method: Composition-based stats.
Identities = 37/262 (14%), Positives = 69/262 (26%), Gaps = 26/262 (9%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYL------------------------DSVTDVRY 56
+ + + + ++G + R + S+TD Y
Sbjct: 13 RTLVRVLSAFIFFIIIGCSNKDWRKNEVFAVPLQPSLQQEVILARMEQILASRSLTDDEY 72
Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
+ +YE+ VL+ + A F+ P L + + +A
Sbjct: 73 AQLLYERGVLYDSLGLRALARNDFSTALSIRPDIPEIFNFLGIYFTQAGNYDAAYEAFDS 132
Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRD--VPYDQRATKLMLQYMSRIVERYTNSPY 174
E Y ++ + G Y D Y +VE+ +
Sbjct: 133 VLELDPTYNFARMNRGIALYYGGRYKLAQDDLLAYYQIDPNDPFRTLWLYLVEKDIDPRM 192
Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234
+ + + Y E + N S AEH E L
Sbjct: 193 AQDNLAARYNQAEKGQWGWNIVEFYLGNINETTLMERLKETSTDNTSLAEHLSETNFYLG 252
Query: 235 EAYVALALMDEAREVVSLIQER 256
+ Y++L D A + L
Sbjct: 253 KHYLSLGDKDSAAALFKLTVAN 274
>gi|193214614|ref|YP_001995813.1| tetratricopeptide domain-containing protein [Chloroherpeton
thalassium ATCC 35110]
gi|193088091|gb|ACF13366.1| Tetratricopeptide TPR_2 repeat protein [Chloroherpeton thalassium
ATCC 35110]
Length = 418
Score = 36.7 bits (82), Expect = 3.1, Method: Composition-based stats.
Identities = 23/228 (10%), Positives = 58/228 (25%), Gaps = 5/228 (2%)
Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
+ D R + E+A L +K NFS+A + + + + L + +
Sbjct: 181 QIIKDLAEKDRSVFALVEEAKLEMKNGNFSEAAKNWKKACEKVENDNYFVQQLALCTYKN 240
Query: 105 YSAGKYQQAASLGEEYIT--QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
S + + G Y ++ + +
Sbjct: 241 KSVNPNIALTDALTIINQLEPEDRNTTDPETLGITGAIYKRLWQINKETTEYLDRAIDCY 300
Query: 163 SRIVERYTNSPYVKGA--RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220
R + + + +++ + K + + I ++
Sbjct: 301 KRGFTINQDYYTGENYALCLDLKSTITNDEEEKIYLKYSAKKTRKEIIEIIENLKNDDDF 360
Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
+ A L Y A+ + + + +P+ W
Sbjct: 361 ELRSDLKWIYATLSHCYFAIGDNENHQLYNTSFNNLHPEN-WEIETYN 407
>gi|73989428|ref|XP_534166.2| PREDICTED: similar to DnaJ (Hsp40) homolog, subfamily C, member 3
[Canis familiaris]
Length = 495
Score = 36.7 bits (82), Expect = 3.1, Method: Composition-based stats.
Identities = 22/258 (8%), Positives = 67/258 (25%), Gaps = 20/258 (7%)
Query: 34 FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93
L ++ + + + +A+ + +++ A + ++ +
Sbjct: 122 VLKSNPSENEEKEAQSQIVKSDEMQRLRSQALDAFESSDYTAAITFLDKILEVCVWDAEL 181
Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153
R+ + K + E+ Y + + +V +
Sbjct: 182 RELRAECFIKEGEPRKAISDLKAASKLKNDNTEAFYKISTLYYQLGDHELSLSEVRECLK 241
Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK----------- 202
+ + + + + ++ A + GR A + E
Sbjct: 242 LDQDHKRCFAHYKQVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPTVSEYTIRSKE 301
Query: 203 -----RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA-REVVSLIQER 256
+ + ++ A+ EAY+ + DEA ++ + +
Sbjct: 302 RICHCFSKDEKPVEAIRICSEVLQMEPDNVNALKDRAEAYLIEEMYDEAIQDYETAQEHN 361
Query: 257 YPQGYWA---RYVETLVK 271
+ L+K
Sbjct: 362 ENDQQIREGLEKAQRLLK 379
>gi|17647755|ref|NP_523620.1| super sex combs, isoform B [Drosophila melanogaster]
gi|24585827|ref|NP_724406.1| super sex combs, isoform A [Drosophila melanogaster]
gi|24585829|ref|NP_724407.1| super sex combs, isoform C [Drosophila melanogaster]
gi|6942068|gb|AAF32311.1|AF217788_1 O-glycosyltransferase [Drosophila melanogaster]
gi|7302245|gb|AAF57338.1| super sex combs, isoform B [Drosophila melanogaster]
gi|10728167|gb|AAG22338.1| super sex combs, isoform A [Drosophila melanogaster]
gi|10728168|gb|AAG22339.1| super sex combs, isoform C [Drosophila melanogaster]
gi|189182206|gb|ACD81879.1| SD06381p [Drosophila melanogaster]
Length = 1059
Score = 36.7 bits (82), Expect = 3.1, Method: Composition-based stats.
Identities = 17/205 (8%), Positives = 43/205 (20%), Gaps = 9/205 (4%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
A + ++ A + + + P R L + + E
Sbjct: 157 NLAAALVAARDMESAVQAYITALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETC 216
Query: 122 ---TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
+ + + +++ A
Sbjct: 217 PGFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAA 276
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
A + Y ++G AI ++ + + +A L A
Sbjct: 277 YLRALNLSPNNAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPNFP---DAYCNLANALK 333
Query: 239 ALALMDEARE---VVSLIQERYPQG 260
+ EA + + +
Sbjct: 334 EKGQVKEAEDCYNTALRLCSNHADS 358
>gi|297690841|ref|XP_002822814.1| PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP4-like [Pongo
abelii]
Length = 459
Score = 36.7 bits (82), Expect = 3.1, Method: Composition-based stats.
Identities = 25/233 (10%), Positives = 69/233 (29%), Gaps = 14/233 (6%)
Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQN---------FSKAYEYFNQCSRDFPFAG 91
+ + ++ + Y+ +++++ L + +A + + +
Sbjct: 163 KPNEGAIVEVALEGYYKDQLFDQRELRFEIGEGENLDLPYGLERAIQRMEKGEHSIVYLK 222
Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151
+ + + L + + ES ++ L + + V +
Sbjct: 223 PSYAFGSVGKEKFQIPPNAELKYELHLKSFEKAKESWEMNSEEKLEQSTIVKERGTVYFK 282
Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
+ K L +IV + F + A + + + A
Sbjct: 283 EGKYKQALLQYKKIVSWLEY-----ESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSA 337
Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
+ + E+ + R EA++A+ + AR + + YP A+
Sbjct: 338 AIESCNKALELDSNNEKGLFRRGEAHLAVNDFELARADFQKVLQLYPSNKAAK 390
>gi|283780348|ref|YP_003371103.1| redoxin [Pirellula staleyi DSM 6068]
gi|283438801|gb|ADB17243.1| Redoxin domain protein [Pirellula staleyi DSM 6068]
Length = 635
Score = 36.7 bits (82), Expect = 3.1, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 29/86 (33%), Gaps = 1/86 (1%)
Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR-FQLVLANYSDAEHAEEAMARLVEAYVAL 240
R A +E+ + + + A + + YS + A EAM +L
Sbjct: 405 YVKFREMSALYNLELSKKDVDFEKVNATWMTSLEEFVKEYSKSPDAAEAMLQLAIGSEFS 464
Query: 241 ALMDEAREVVSLIQERYPQGYWARYV 266
++A E I +P A+
Sbjct: 465 GKEEKAIEWFGKIVSEFPSTDLAKKA 490
>gi|229918431|ref|YP_002887077.1| TPR repeat-containing protein [Exiguobacterium sp. AT1b]
gi|229469860|gb|ACQ71632.1| TPR repeat-containing protein [Exiguobacterium sp. AT1b]
Length = 219
Score = 36.7 bits (82), Expect = 3.1, Method: Composition-based stats.
Identities = 23/206 (11%), Positives = 50/206 (24%), Gaps = 2/206 (0%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
E+ + +++ F +A ++FN+ P ++ + E
Sbjct: 5 EQGIQAMQQGEFEQAAKHFNEAIEANPTDPTGFVNMGTLLQAINDYDRAVIFYDKAIELD 64
Query: 122 TQYPESKN-VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
+ + + Y + + + + +V+
Sbjct: 65 GSFGAAHYAKGALAYELEQLESAEASLRQALLSGMDDADLHFMLGLTYKAMGDFVRAMPR 124
Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
+ E+ L DA H +A L AY L
Sbjct: 125 LREAKKQSPEDVEITFQYGLALAQSEQLEEAVVALEETLDLDASHT-DARYNLAIAYAFL 183
Query: 241 ALMDEAREVVSLIQERYPQGYWARYV 266
+ + + E P AR
Sbjct: 184 GDQERTYAELQRVLEMQPDHELARDA 209
>gi|196040447|ref|ZP_03107747.1| putative ABC transporter, substrate-binding protein [Bacillus
cereus NVH0597-99]
gi|196028579|gb|EDX67186.1| putative ABC transporter, substrate-binding protein [Bacillus
cereus NVH0597-99]
Length = 270
Score = 36.7 bits (82), Expect = 3.1, Method: Composition-based stats.
Identities = 13/70 (18%), Positives = 23/70 (32%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K LT S ++ L + + + L E+ EKA L+++ E
Sbjct: 1 MKKLLLTALISTSIFGLAACGGKDNDEKKLVVGASNVPHAEILEKAKPLLEKKGIELKVE 60
Query: 79 YFNQCSRDFP 88
F
Sbjct: 61 KFQDYVLPNK 70
>gi|116075659|ref|ZP_01472918.1| TPR repeat [Synechococcus sp. RS9916]
gi|116066974|gb|EAU72729.1| TPR repeat [Synechococcus sp. RS9916]
Length = 734
Score = 36.7 bits (82), Expect = 3.1, Method: Composition-based stats.
Identities = 24/214 (11%), Positives = 53/214 (24%), Gaps = 7/214 (3%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
E+AV + + +A + + + +L +Q + + E
Sbjct: 36 EEAVALMDQGRLQEAESIYRELIAAGTNNHIVYGNLAALCGMQGRFSELIKLLRRTLEIK 95
Query: 122 TQYPESKNV---DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
YPE+ + + + + + +
Sbjct: 96 PNYPEAHYNLGLALKEQGDLTAAIASYNKALQLRPNYPEAHNNLGNAYKDQGDLTAAIAS 155
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
+G K+G+ AAI + L + EA L A+
Sbjct: 156 YNSALQLNPNDPETHNNLGVVLKKQGDPTAAITSYHQALQLQPNYP---EAHYNLGIAFK 212
Query: 239 ALALMDEA-REVVSLIQERYPQGYWARYVETLVK 271
+ A +Q + + +K
Sbjct: 213 EQGDLTAAIASYNKALQLKPNDADTYNNLGNALK 246
>gi|91203591|emb|CAJ71244.1| hypothetical protein kustc0499 [Candidatus Kuenenia
stuttgartiensis]
Length = 943
Score = 36.7 bits (82), Expect = 3.1, Method: Composition-based stats.
Identities = 30/227 (13%), Positives = 54/227 (23%), Gaps = 4/227 (1%)
Query: 49 DSVTDVRYQREVY--EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYS 106
+ ++ VY +FLK+ KA E F + V ++L +
Sbjct: 712 EKAVEINPAEPVYYNNLGAIFLKKGMPDKAIESFKKALELSQNGQVYLENLTNACLSAGK 771
Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
+ E + N V Y Y + +R Y +
Sbjct: 772 YEELLDCYKKLIERNPSVADYYNNVGVIYKKKQQYDEAVRYSQKAVSLAPENPIYTHNLA 831
Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF--QLVLANYSDAE 224
Y + A + L +
Sbjct: 832 GEYVDLQQHDRAETLLREFNMAYPEHGYVNIYLLLADIYLKNFDWENAVHECQRVIQIDK 891
Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+ +A L Y D A+E + P AR + ++
Sbjct: 892 KSIDAHRILGVVYYNREQYDLAKEALENTLTLAPDDKVARELLEKIE 938
>gi|13097417|gb|AAH03447.1| FK506 binding protein 4 [Mus musculus]
Length = 458
Score = 36.7 bits (82), Expect = 3.1, Method: Composition-based stats.
Identities = 22/191 (11%), Positives = 53/191 (27%), Gaps = 5/191 (2%)
Query: 74 SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
+A + + + + + + + + + ES +
Sbjct: 205 EEAIQRMEKGEHSIVYLKPSYAFGSVGKERFQIPPHAELRYEVRLKSFEKAKESWEMSSA 264
Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
L + + + + K L +IV + F + A +
Sbjct: 265 EKLEQSNIVKERGTAYFKEGKYKQALLQYKKIVSWLEY-----ESSFSGEEMQKVRALRL 319
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+ + A + + E+ + R EA++A+ D AR +
Sbjct: 320 ASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLFRRGEAHLAVNDFDLARADFQKV 379
Query: 254 QERYPQGYWAR 264
+ YP A+
Sbjct: 380 LQLYPSNKAAK 390
>gi|310822888|ref|YP_003955246.1| tetratricopeptide repeat-containing protein [Stigmatella aurantiaca
DW4/3-1]
gi|309395960|gb|ADO73419.1| Tetratricopeptide repeat protein [Stigmatella aurantiaca DW4/3-1]
Length = 1216
Score = 36.7 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 10/76 (13%), Positives = 27/76 (35%)
Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
K + + A+ ++ ++ Y E ++E + L + +A
Sbjct: 166 KSEKAELIARSKEYGKHAVEQYTKIVQEYPSFERSDEVLFFLGNFLMEDGQDRKALVAYK 225
Query: 252 LIQERYPQGYWARYVE 267
+ E++P+ + V
Sbjct: 226 RLVEKFPKSKFLPDVY 241
Score = 35.9 bits (80), Expect = 6.7, Method: Composition-based stats.
Identities = 11/104 (10%), Positives = 34/104 (32%), Gaps = 3/104 (2%)
Query: 166 VERYTNSPYVKG---ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
V + Y + + + ++ ++ A + + ++ +
Sbjct: 680 VNEWARKFYANDKLAVGKFREDLSKLIEQSSFALVAQLEEKKQFAKAADAYLAFVKDFPE 739
Query: 223 AEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
A++A+ + ++D A EV + +YP+ +
Sbjct: 740 TTIADQALYNASVDFFKAKMLDRAIEVRQSLISQYPRSRFVPDS 783
>gi|149915622|ref|ZP_01904148.1| hypothetical protein RAZWK3B_06692 [Roseobacter sp. AzwK-3b]
gi|149810514|gb|EDM70357.1| hypothetical protein RAZWK3B_06692 [Roseobacter sp. AzwK-3b]
Length = 282
Score = 36.7 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 12/55 (21%), Positives = 25/55 (45%)
Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
+ A + ++ ++ A EA+ RL A AL ++A ++ + R+P
Sbjct: 211 QMKEAARAYLDTFSSDNNGPEAAEALFRLGSALGALGQTEQACVTLAEVGNRFPG 265
>gi|73670079|ref|YP_306094.1| TPR repeat-containing protein [Methanosarcina barkeri str. Fusaro]
gi|72397241|gb|AAZ71514.1| TPR repeat [Methanosarcina barkeri str. Fusaro]
Length = 927
Score = 36.7 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 27/200 (13%), Positives = 45/200 (22%), Gaps = 6/200 (3%)
Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
Y+ Y+K + F N+ +A + N+ P + + S + A
Sbjct: 217 PEYKEAWYKKGLAFYNSGNYEEAVKACNKTIELDPQNPRVWANKGNALSKLNSYEEAITA 276
Query: 114 ASLGEE---YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
+ E + + L +
Sbjct: 277 YNESIELDPQNSVAWNGLGFAVASSGNYEEAIKFYNKAIEIDPQNSEALSNKGFALYNVG 336
Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
N A Q A + G G Y A+ F A
Sbjct: 337 NREEAIKALDKAIEVNPQNAVAWYDKGSILKNLGNYEEAVEAFDKATELDPKKSS---AW 393
Query: 231 ARLVEAYVALALMDEAREVV 250
A +L DEA +
Sbjct: 394 NNKGNALSSLGNYDEAIKAY 413
>gi|291527181|emb|CBK92767.1| Tetratricopeptide repeat [Eubacterium rectale M104/1]
Length = 320
Score = 36.7 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 20/239 (8%), Positives = 57/239 (23%), Gaps = 14/239 (5%)
Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEK-AVLFLKEQNFS 74
+ ALT+ + L G ++ Y + + ++ ++
Sbjct: 1 MIKNKFMALTLTVVLTAGMLTGCGSGDKAK-----------DKDAYRQYGINCIENGSYD 49
Query: 75 KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
A + F + + A + + + ++ + Y
Sbjct: 50 DAVDAFQKALDQSVGSVGAEELDICYYKAKAQYLSGDVDGAIDTYTAIIDYNKDSDAYYL 109
Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
D + + + G + +
Sbjct: 110 RGCIYFAKNDSDKGLKDFKTALSENNDNYELYLGVYETLSKYGMNDQGKEYLDNALKLKA 169
Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAE--HAEEAMARLVEAYVALALMDEAREVVS 251
+ Y++RG + + + + A +A + E Y D +++
Sbjct: 170 KTADDYMQRGRIYTLLGDYDSAIKSLQKAIDEKLVKANYYMGEVYQKKGDNDSSQKYFK 228
>gi|294670881|ref|ZP_06735737.1| hypothetical protein NEIELOOT_02585 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291307368|gb|EFE48611.1| hypothetical protein NEIELOOT_02585 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 252
Score = 36.7 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 22/242 (9%), Positives = 57/242 (23%), Gaps = 5/242 (2%)
Query: 27 FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86
+ C L + + T+ + + + +V +++ ++ A + +
Sbjct: 6 IAILLACALSACKSTELKRPSKKERTEEVSRIKT-QLSVEYMRAGDYRLAVTTIEEALQA 64
Query: 87 FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY--ITQYPESKNVDYVYYLVGMSYAQM 144
+A K +++ + + ++ + A +
Sbjct: 65 DHKNEIAWLMRAQIYQYLKVNDKAEESFREALRLKPDSAEINNNYGWFLCNYLNNPNAAI 124
Query: 145 IRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204
T Q + A + I + +
Sbjct: 125 PYFDRALADPTYPAPQVAYMNKGICSAKMGQYSLAQAYLERGLASAPAFMPIRKELARTK 184
Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLV--EAYVALALMDEAREVVSLIQERYPQGYW 262
I + Y A L+ + A A E + I+ YP
Sbjct: 185 MLAGQIKEADQLFRQYQSQMEVLSADDLLLGWQLSRASGNSQAAYEYEAQIRANYPYSEE 244
Query: 263 AR 264
+
Sbjct: 245 LK 246
>gi|258626846|ref|ZP_05721653.1| conserved hypothetical protein [Vibrio mimicus VM603]
gi|262165946|ref|ZP_06033683.1| TPR repeat-containing protein [Vibrio mimicus VM223]
gi|258580893|gb|EEW05835.1| conserved hypothetical protein [Vibrio mimicus VM603]
gi|262025662|gb|EEY44330.1| TPR repeat-containing protein [Vibrio mimicus VM223]
Length = 253
Score = 36.7 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 11/92 (11%), Positives = 31/92 (33%)
Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
F + +A + + + + ++ D+ +A+ +L +
Sbjct: 162 FQTDYPNSTFSANSHYWLGQLYFAKKEDKEAAKSFIAVVSHQDSNKRADALVKLGDIAKR 221
Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETLVK 271
++AR+ + YP A+ + +K
Sbjct: 222 NNNAEQARKFYQQAIDEYPDSASAKVAKESLK 253
>gi|195430618|ref|XP_002063351.1| GK21857 [Drosophila willistoni]
gi|194159436|gb|EDW74337.1| GK21857 [Drosophila willistoni]
Length = 1088
Score = 36.7 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 36/247 (14%), Positives = 67/247 (27%), Gaps = 19/247 (7%)
Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99
++ + TD ++ E+ KA + +N +A N ++ +P
Sbjct: 651 KEPKTETKPKLETDDLFEEEL-RKANAEMIRENHDQALLALNTITQKYPHEPAGHLLRAQ 709
Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
Q + +Y + + + + I + + + + ++
Sbjct: 710 HLDHLAELRHSNQLLGEAIDSYKRYLAFAELITNDWEYREAGKRCIERLRFMGQQYQTVV 769
Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR---FQLV 216
I T+ N K+V L VA + + +
Sbjct: 770 INEQLIERFPTDPKLRNELSLTHLWDNNLRQLKKVAKDTLALWPNNAVAQLHFGLALKQL 829
Query: 217 LANY------------SDAEHAEEAMAR--LVEAYVALALMDEAREVVSL-IQERYPQGY 261
NY S E +EA L E L EAREV +
Sbjct: 830 DNNYVQALPYLQYAINSQEEGTQEAFFYQSLGETLQRLGKNSEAREVYKRGAFNNFFISP 889
Query: 262 WARYVET 268
W R
Sbjct: 890 WQRSFYN 896
>gi|188589590|ref|YP_001919520.1| putative lipoprotein [Clostridium botulinum E3 str. Alaska E43]
gi|188499871|gb|ACD53007.1| putative lipoprotein [Clostridium botulinum E3 str. Alaska E43]
Length = 356
Score = 36.7 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 20/205 (9%), Positives = 63/205 (30%), Gaps = 1/205 (0%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K L I + + +G + S + +D + +K ++ ++ +NF +A +
Sbjct: 1 MKKITLIIMSMMVIFISIGCSNKISNNENIDLYDSKKAIETA-QKYLMEIQNENFEEAKK 59
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+ + S + + S + + L + + N Y +
Sbjct: 60 FCTKDFASASKINDLGNSKIQVFKINKSVDGGDKVSILFDVLRGEDYSPNNNLDKYNIDV 119
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
+ + + + + + + + S K + + + + + R
Sbjct: 120 IKENDEYKINNLSAAENVEVYEKENELRLQTSGSGESKLILKLLDMPKQVYNKGDNPLER 179
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDA 223
+ ++ + + YS
Sbjct: 180 VDIPSDKFSSCGLSYSGDKVAYSTT 204
>gi|119496609|ref|XP_001265078.1| DnaJ domain protein [Neosartorya fischeri NRRL 181]
gi|119413240|gb|EAW23181.1| DnaJ domain protein [Neosartorya fischeri NRRL 181]
Length = 688
Score = 36.7 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 25/194 (12%), Positives = 52/194 (26%), Gaps = 17/194 (8%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFA-GVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
E+ K +++ KA E +++ P + K L A + +Y+ A + E
Sbjct: 433 EEGNNAFKAKDYRKAIELWSEALEVDPQNKDMNSKILQNRAQAYINLKEYENAINDCNEA 492
Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
+ P +M + ++ + E ++
Sbjct: 493 LKLDPSYVKA-----------QKMRAKAYGGAGNWEEAIRDYKAVAEANPGEKGIQEDIR 541
Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY-SDAEHAEEA----MARLVE 235
+ K+ K ++ + Y D EA + E
Sbjct: 542 RAEFELKKAQRKDYYKILGVSKDASESEIKKAYRKLAIQYHPDKNRDGEAGDEKFKEIGE 601
Query: 236 AYVALALMDEAREV 249
AY L +
Sbjct: 602 AYETLIDPQKRAAY 615
>gi|51783969|ref|NP_001001725.1| intraflagellar transport protein 88 homolog [Danio rerio]
gi|45479854|gb|AAS66768.1| Ift88 [Danio rerio]
Length = 824
Score = 36.7 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 23/212 (10%), Positives = 56/212 (26%), Gaps = 6/212 (2%)
Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
D + K ++++ KA E++ + R+ A +L ++ +
Sbjct: 480 ADRYNPAALINKGNTLFVKEDYEKAAEFYKESLRNDSSCTEALYNLGLTYKRLGRLEEAL 539
Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY---DQRATKLMLQYMSRIVER 168
+ + Y + Q I + +L + + +
Sbjct: 540 DCFLKLHAILRNSAQVMYQLANLYEMLEDPHQAIEWLMQLTSVTPTDAQVLAKLGDLYDN 599
Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
+ + + +G YY+ AI F+ +
Sbjct: 600 EGDKSQAFQYYYESYRYFPSNISVIEWLGAYYIDTQFCEKAIQYFERATLIQPTQVKWQ- 658
Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQG 260
+ Y +A E I ++P+
Sbjct: 659 --LMVASCYRRSGNYQKALETYKEIHRKFPEN 688
>gi|45357839|ref|NP_987396.1| hypothetical protein MMP0276 [Methanococcus maripaludis S2]
gi|45047399|emb|CAF29832.1| Conserved hypothetical protein [Methanococcus maripaludis S2]
Length = 344
Score = 36.7 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 27/249 (10%), Positives = 57/249 (22%), Gaps = 19/249 (7%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
+ + I V + G Y D + + N+ +
Sbjct: 1 MQKIVVFLTVILVLLMAGCIGDQKSKSYNDK-------------GLELYNQGNYVDSISE 47
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY---ITQYPESKNVDYVYYL 136
+N + P + + S G+ + ++
Sbjct: 48 YNLALLENPKSAEIWVNKGNSLLKLGIYGESTECFDKALLIDPENSEAFNGLGTVLSKTG 107
Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196
+M + + + +
Sbjct: 108 NYQKALEMYDKSLNIDSENSEAWKNKGITLNNMQRYSEAIDCFDKSISINAKNSDVWYNK 167
Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
G K GEY +I + L E E A+ +Y+ L + A E + +
Sbjct: 168 GETQFKLGEYEKSIDSYNKALLI---DEKMETALLGKGNSYLKLQNYESAIECFNTAETI 224
Query: 257 YPQGYWARY 265
P+ + Y
Sbjct: 225 NPKSEYPPY 233
>gi|262277488|ref|ZP_06055281.1| Tol-Pal system YbgF [alpha proteobacterium HIMB114]
gi|262224591|gb|EEY75050.1| Tol-Pal system YbgF [alpha proteobacterium HIMB114]
Length = 307
Score = 36.7 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 14/95 (14%), Positives = 31/95 (32%)
Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
+ + + + E Y+ A +K ++ +A + + +A +
Sbjct: 161 SVVKIEEPEVKEILPKKSPEEQYKFATSLIKVGDYDQAELALREFVKKNSKHKLAGNAQY 220
Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
A Y Y AA+ + +YP+S
Sbjct: 221 WYAETFYIRQLYHDAAAAYLDGYQKYPQSSKGPQN 255
>gi|237745487|ref|ZP_04575967.1| HemY protein [Oxalobacter formigenes HOxBLS]
gi|229376838|gb|EEO26929.1| HemY protein [Oxalobacter formigenes HOxBLS]
Length = 398
Score = 36.7 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 18/192 (9%), Positives = 45/192 (23%), Gaps = 10/192 (5%)
Query: 70 EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129
++ + + + L M A+ + A ++ + +S+
Sbjct: 199 AGDWDEVLRLVHSLDHHRVLQPAVSEQLKMQAYEGMLSKTMPDANAVMAVWNAIPVDSRK 258
Query: 130 VD----YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
V Y + + R +++ +
Sbjct: 259 VPSLAIRAAYAFYFCGWLDKSRDVLTLSLNENWDTGLMRAYVEFSSESEFDDLEKRIACC 318
Query: 186 RNQLAAKEVEI------GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
+ ++ G Y ++ + A + L S A L + Y
Sbjct: 319 ESWKEKYAMQAQWTLTLGELYYRQKRFDKACHYLEETLKQKSGIPLFPRAHLILAQLYEE 378
Query: 240 LALMDEAREVVS 251
D+A
Sbjct: 379 KGQSDKAAYHYR 390
>gi|254428330|ref|ZP_05042037.1| tetratricopeptide repeat domain protein [Alcanivorax sp. DG881]
gi|196194499|gb|EDX89458.1| tetratricopeptide repeat domain protein [Alcanivorax sp. DG881]
Length = 393
Score = 36.7 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 11/48 (22%), Positives = 18/48 (37%)
Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
Q + ++ A +A L E+Y + AR I R+P
Sbjct: 104 QQLSEVEQNSPAAVDAAFLLAESYRRDGDEERARAWFIRIAARFPGNP 151
>gi|260816110|ref|XP_002602815.1| hypothetical protein BRAFLDRAFT_132138 [Branchiostoma floridae]
gi|229288127|gb|EEN58827.1| hypothetical protein BRAFLDRAFT_132138 [Branchiostoma floridae]
Length = 1125
Score = 36.7 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 27/278 (9%), Positives = 65/278 (23%), Gaps = 47/278 (16%)
Query: 38 WERQSSRDVYLDSVTDVRYQREVY-------EKAVLFLK-----------EQNFSKAY-- 77
R+ ++ T + +Y E+A+ + E + A
Sbjct: 831 CSRKEECLQQIEDPTPLFNAVGMYLRRDGQSEQALEIFQLAVRATEALNREDKYQLAIAK 890
Query: 78 ----EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
+ + + +SL + + + ++ +
Sbjct: 891 RYLGKAYFELLELDKSEREFEESLRLIRQLYPQDHIEVACIQAVARARQRRNLTEMGEDY 950
Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
+R + YM + + Y + R + + + K
Sbjct: 951 VKETERMLQTALRLKKTFHEKRNISNHYMIAVAYNNLGALYQELGRLEESEILIKASLKM 1010
Query: 194 VEIGRYYLKRGEYVAAIPRFQLV--LANYSDAEHA---------------------EEAM 230
+ + N + E A + A+
Sbjct: 1011 KRAVFGEEHISVAIVLNKLARNYLLGDNRNLTEAARLTKLSLELKKKVLPQRHRACQLAL 1070
Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
LV Y + EA E + + E + + +E
Sbjct: 1071 YFLVRIYKEMGQEAEAGEYLKELMEYDQNNEFVQKLED 1108
>gi|203287668|ref|YP_002222683.1| surface-located membrane protein 1 [Borrelia recurrentis A1]
gi|201084888|gb|ACH94462.1| surface-located membrane protein 1 [Borrelia recurrentis A1]
Length = 781
Score = 36.7 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 16/220 (7%), Positives = 56/220 (25%)
Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
+ + +Y + + + Y+ ++ K + + ++ + F++ P A + S
Sbjct: 421 KKAETIYEEIANTTNNEEDHYKLGIIKFKLKKYEESLQAFDKAISLNPQHKKAYTNKGTS 480
Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
+ + Y + + TK
Sbjct: 481 LIALNKPQQAIKEFEKAIAIDQNYDNAYYKKGIAEEQDNDKQNAFISFKKAYEITKNPHY 540
Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220
+ + + ++ + A ++ + + +
Sbjct: 541 ALKAGIIANHLGDFKNSEKYLKQSNTSLNAKNDIMFYNLSMANFKNNHLNESLININKAL 600
Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
+ E + Y+ +EA + + + + P
Sbjct: 601 NINPTQTEYLYLKASIYLTKENYNEAVPLYNTVISKNPDN 640
>gi|91203787|emb|CAJ71440.1| hypothetical protein kustc0695 [Candidatus Kuenenia
stuttgartiensis]
Length = 433
Score = 36.7 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 22/197 (11%), Positives = 51/197 (25%), Gaps = 5/197 (2%)
Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
D ++ V +L + A + F+ ++ A +L ++ Q + +
Sbjct: 186 DPNNPYIMFNLGVGYLDMGLYEDAEKIFSDATKIDENYDNAHYNLAIALHRQGKIDEAIK 245
Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV---PYDQRATKLMLQYMSRIVERY 169
+ E +Y V + L + + + + +
Sbjct: 246 ELNTTLEINPKYSNVYVVFGLMSLREKKFEEALVHYNKAMEINPENIEARYQRAIVYALQ 305
Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
V + A IG Y + A+ + + E+A
Sbjct: 306 QRYDEALEENREVLRRNPKHANAAYNIGTIYHRMDRMDKAMEWYDKITKKID--PLYEDA 363
Query: 230 MARLVEAYVALALMDEA 246
+ Y +A
Sbjct: 364 YYNRAQIYSMQGDHSKA 380
>gi|301063216|ref|ZP_07203765.1| SpoIID/LytB domain protein [delta proteobacterium NaphS2]
gi|300442644|gb|EFK06860.1| SpoIID/LytB domain protein [delta proteobacterium NaphS2]
Length = 558
Score = 36.7 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 23/58 (39%), Gaps = 2/58 (3%)
Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
++ V Y AE R L +DEA+ V+ YP+G + E L+
Sbjct: 97 YRQVSREYPQ--AAEIGRYREGLLLFQLDRLDEAQPVLVTYLTNYPEGKFRFQAEALL 152
>gi|291539579|emb|CBL12690.1| hypothetical protein RO1_21780 [Roseburia intestinalis XB6B4]
Length = 384
Score = 36.7 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 32/220 (14%), Positives = 68/220 (30%), Gaps = 2/220 (0%)
Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF-VQYSAGKYQ 111
D Y L LK+Q+ A + F + P + + + +
Sbjct: 92 DEENGNAYYLHGCLSLKQQDTDTAKKDFANAVKYNPDDYELYVGIYENLAGNNMTEEGEE 151
Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
+ +YYL+G + ++ + Y++++ E +
Sbjct: 152 YLNKAFDIKGNSAENLTWRGRIYYLLGQYDNAVKELEGAVKKDSAKANLYLAQVYEAEED 211
Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231
S + + + +++G Y AA+ + LA + +E ++
Sbjct: 212 SANAEKYYQAYVDSGTADSVAMNALAEIQMEKGNYEAALEDIRQGLAMDNVTNQ-QELLS 270
Query: 232 RLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+ AY A +VV YP A+ +K
Sbjct: 271 NQIIAYEYSGDFSSAWDVVQQYVSLYPDDEAAQREYIFLK 310
>gi|229131777|ref|ZP_04260651.1| hypothetical protein bcere0014_7280 [Bacillus cereus BDRD-ST196]
gi|228651671|gb|EEL07634.1| hypothetical protein bcere0014_7280 [Bacillus cereus BDRD-ST196]
Length = 187
Score = 36.7 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 10/172 (5%), Positives = 37/172 (21%), Gaps = 2/172 (1%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K + + F + LV + ++ L + + ++ + A +
Sbjct: 11 MKKLFMLLSFFVICIVLVACSGEQKTEIQLLKEMPKPKAMTI-DSSLSKKEATEIVHAAQ 69
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
F + +++ + F Q + + + +
Sbjct: 70 RFYAFWDTGKE-ELIPQTVTENFFDNTLPKGRPQGTEGLKLAAQNFRKVVPDIHCEIEDL 128
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
+ + I + + +
Sbjct: 129 LVVGDKVTARLSFTGTHNDKKINFFAIDILHVKDGKITEDWHLEDNLTLKQQ 180
>gi|58263789|ref|XP_569174.1| hypothetical protein CNB02510 [Cryptococcus neoformans var.
neoformans JEC21]
gi|57223824|gb|AAW41867.1| hypothetical protein CNB02510 [Cryptococcus neoformans var.
neoformans JEC21]
Length = 1072
Score = 36.7 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 22/204 (10%), Positives = 44/204 (21%), Gaps = 15/204 (7%)
Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
A + + + + + E + + + +
Sbjct: 439 AVRICKLSLYEGDGSRALNSFHVHLKRFGDLSRGWGIGEETFEFWSWVARQYRVFAELLE 498
Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
+ ++I P + + T A
Sbjct: 499 MAQQHNLRIITPPPTFPTLESSAAPQSLSYLAT-------PISSQNPTQVLQHPAYYYYT 551
Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYS-----DAEHAEEAMA---RLVEAYVALALMDEAR 247
LKR E +L YS + A+ R+ E Y + A
Sbjct: 552 AACGTLKRQERFQEALDAELFSKAYSLLKDLPSPSNRTALYIAYRIAETYNFSGQHEMAI 611
Query: 248 EVVSLIQERYPQGYWARYVETLVK 271
I + W V+ + K
Sbjct: 612 RFFDRISHSFKNEKWTELVQGIRK 635
>gi|332970069|gb|EGK09067.1| 1A family penicillin-binding protein [Desmospora sp. 8437]
Length = 862
Score = 36.7 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 24/237 (10%), Positives = 54/237 (22%), Gaps = 7/237 (2%)
Query: 16 AYQLYKFALTIFFSIAVCFLVGWER---QSSRDVYLDSVTDVRYQREVYEK-AVLFLKEQ 71
+ K+ L +F + + + G + + + VY++ ++
Sbjct: 45 FFN-KKWFLLVFITTILLAVGGCSAVMMSAKTYNMDEVKKSMESSSTVYDRNGKKVMQLG 103
Query: 72 NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
+ ++ Y + A + E
Sbjct: 104 STNREYVELKDVKSPELYQAFVAVEDERFYSHHGVDYWSLGRAVVKNIIALGKAEGGGTI 163
Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
+ + L + + Y+ F V ++AA
Sbjct: 164 TMQVARNAVIKDRKKTYSRKLDEMMAALSLEKEVKKSKILETYLNYIDFGNNVQGIKMAA 223
Query: 192 KEVEIGRYYLKRGEYVA--AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
K ++ E + Y E+A R +A EA
Sbjct: 224 KIYFDKDITKEKLEPHEIALLAGLPKAPYGYDPFRFPEKAKFRRNVVLNKMAEETEA 280
>gi|320586775|gb|EFW99438.1| 20S cyclosome subunit [Grosmannia clavigera kw1407]
Length = 371
Score = 36.7 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 26/191 (13%), Positives = 52/191 (27%), Gaps = 2/191 (1%)
Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
A+L ++ A + F+ P + +V K A L
Sbjct: 72 ALLAYHSKDLMAAEQRFSTLLSQHPHRLDSLDHYSNILYVLNLRPKLAFLAHLCSSLDKF 131
Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
PE++ VD Y + L + + + ++
Sbjct: 132 RPETRAVDVNRRDYRAWYGLGQTYEVLELHTYALWYYKKAAGLRPWDGKMWMAVGSCLQK 191
Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE--HAEEAMARLVEAYVALA 241
+GR + K ++ + A + E + ++ Y L
Sbjct: 192 MGRERDGIKALKRALLADANYDSTGANFGGNVDNNGPRGVAGHLDPEVLLQIASMYDQLG 251
Query: 242 LMDEAREVVSL 252
DEA+ + L
Sbjct: 252 DKDEAKAYMEL 262
>gi|320538489|ref|ZP_08038352.1| tetratricopeptide repeat protein [Treponema phagedenis F0421]
gi|320144660|gb|EFW36413.1| tetratricopeptide repeat protein [Treponema phagedenis F0421]
Length = 390
Score = 36.7 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 32/226 (14%), Positives = 60/226 (26%), Gaps = 8/226 (3%)
Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
++ + + + K++N +A EY+ +C P A L
Sbjct: 55 KAIEEFKKILELEEHNNYALVGLGDAARKKENCKEAIEYYTECLTYHPGNNYALFGLADC 114
Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
K Q + Y + R K
Sbjct: 115 YKSLNQYAKAIQIWEQYLLHDDTNITVLTRIADAYRKTHDFQNSKRLYTKVLAIEKNNPY 174
Query: 161 YMSRIVERYTNSPYVKGARFY-----VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
+ + + + K A FY T N IG Y K + F+
Sbjct: 175 ALIGLGHLHYDFKKYKEALFYWQKVVDTNPENIDIRVLTSIGNCYRKMKLFDKGAMYFEK 234
Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
L + + L + Y L +++ + + I E+ P+
Sbjct: 235 TLEKDPKNFY---GLFGLADCYRGLGQQEKSIKYWAAILEKDPKNK 277
>gi|302810900|ref|XP_002987140.1| hypothetical protein SELMODRAFT_125570 [Selaginella moellendorffii]
gi|300145037|gb|EFJ11716.1| hypothetical protein SELMODRAFT_125570 [Selaginella moellendorffii]
Length = 787
Score = 36.7 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 20/223 (8%), Positives = 57/223 (25%), Gaps = 2/223 (0%)
Query: 33 CFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV 92
V ++ + V Y A+ L +N+S+A + +
Sbjct: 561 LAWVACSELAAMASPVLGVDMELKFEASYRHALTLLACKNYSEAATSAGELFALCYKYDM 620
Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
+ + + K A + + S++++ + +
Sbjct: 621 QLHVVKVLLLIAEIHKKSGSAVTGLPYVLGSITLSQSLNLDLLHAASRVSLAELWLDLGA 680
Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
+ L + + + R + + +
Sbjct: 681 DHAQRALDLLQQSLPLVLGHG-SLELRARTNLCIARCYVSSTDFAVATAPELVLDPLQLA 739
Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
+ + D + A EA L + ++ M++ + Q+
Sbjct: 740 AEEFMNL-EDKDQASEAFYLLATTFNSIGRMEDRDKAAEKFQQ 781
>gi|261334077|emb|CBH17071.1| intraflagellar transport protein IFT88, putative [Trypanosoma
brucei gambiense DAL972]
Length = 800
Score = 36.7 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 28/200 (14%), Positives = 63/200 (31%), Gaps = 6/200 (3%)
Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
+Y + + + +A + F + + + + + + S + L
Sbjct: 520 EAIYNLGLTAKRLGLYEEALKMFKR-GQLLVDSHEIVYQIADISDLVSSPATSEWFNRLV 578
Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
T + +Y G + + M N Y K
Sbjct: 579 GRVPTDPNILARMGSLYAREGDDSQAFHYYLEAYRYFQVNMDVISWLGAYFVKNEVYDKA 638
Query: 178 ARFYVTVGRNQLAAKEVE--IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
+F+ + Q + + + + +RG+YV A ++ + Y + E + LV
Sbjct: 639 IQFFERASQIQPQEVKWQLMVASCHRRRGDYVQAKRLYEALHRKYPE---NLECLRYLVH 695
Query: 236 AYVALALMDEAREVVSLIQE 255
L+DEA E +++
Sbjct: 696 LCKDAGLIDEANEWFMKVKK 715
>gi|260820114|ref|XP_002605380.1| hypothetical protein BRAFLDRAFT_74200 [Branchiostoma floridae]
gi|229290713|gb|EEN61390.1| hypothetical protein BRAFLDRAFT_74200 [Branchiostoma floridae]
Length = 1999
Score = 36.7 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 24/191 (12%), Positives = 57/191 (29%), Gaps = 6/191 (3%)
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
Y+K + + + +A + K+L A V S G+ ++ + E+
Sbjct: 1066 YKKGLDY-----YEQALKILKGVYGQNTAHPNIAKTLNNLASVWESLGETKKTLAYNEQV 1120
Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
+T + + S + + + K ++ +E + A
Sbjct: 1121 LTMRKTIYGKSTAHADIAESLSSLATTWHHLGD-YKEAVRLHDLALEMRKSVYGQSTAHP 1179
Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
+ +L +G + A+ + + + A + L E Y L
Sbjct: 1180 DIASSLRKLGDSWKHLGDCWKAITYMNQALQMMRTMYHPNTTHPEVAFAFSGLGELYNQL 1239
Query: 241 ALMDEAREVVS 251
+A +
Sbjct: 1240 GDHRKAIDYFE 1250
>gi|254469021|ref|ZP_05082427.1| hypothetical protein KB13_1247 [beta proteobacterium KB13]
gi|207087831|gb|EDZ65114.1| hypothetical protein KB13_1247 [beta proteobacterium KB13]
Length = 320
Score = 36.7 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 16/104 (15%), Positives = 37/104 (35%)
Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
+Y + + + + IG Y A++ + ++AN+ D E
Sbjct: 210 KYKEAFELFDRFVTAYPNSQRAVEAKKNIGYIQFALKNYKASLSTYDKLIANHPDHELMP 269
Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
E + + L + +A++ + I + YP + +K
Sbjct: 270 EILYGKANTEIQLTRITKAKQTLRRIIKEYPNASIIESAKKRLK 313
>gi|188026376|ref|ZP_02961864.2| hypothetical protein PROSTU_03937 [Providencia stuartii ATCC 25827]
gi|188020162|gb|EDU58202.1| hypothetical protein PROSTU_03937 [Providencia stuartii ATCC 25827]
Length = 305
Score = 36.7 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 39/254 (15%), Positives = 68/254 (26%), Gaps = 26/254 (10%)
Query: 29 SIAVCFLVGWERQSSRDVYL------------------------DSVTDVRYQREVYEKA 64
++ L+G + R + S+TD Y + +YE+
Sbjct: 21 ALIFFVLIGCSSKDWRKNEVFAVPLQPSLQQEVILARMEQILASRSLTDDEYAQLLYERG 80
Query: 65 VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY 124
VL+ + A F+ P L + + +A E Y
Sbjct: 81 VLYDSLGLRALARNDFSTALAIRPDIPEIFNFLGIYFTQAGNYDAAYEAFDSVLELDPTY 140
Query: 125 PESKNVDYVYYLVGMSYAQMIRD--VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
++ + G Y D Y +VE+ + +
Sbjct: 141 TFARMNRGIALYYGGRYKLAQDDLLAYYQIDPNDPFRTLWLYLVEKDIDPRVAQDNLAAR 200
Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242
+ + Y K E + N S AEH E L + Y++L
Sbjct: 201 YDRAEKGLWGWNIVEFYLGKISENTLMERLKETSTDNTSLAEHLSETNFYLGKHYLSLGD 260
Query: 243 MDEAREVVSLIQER 256
D A + L
Sbjct: 261 KDSATALFKLTVAN 274
>gi|220917987|ref|YP_002493291.1| hypothetical protein A2cp1_2888 [Anaeromyxobacter dehalogenans
2CP-1]
gi|219955841|gb|ACL66225.1| conserved hypothetical protein [Anaeromyxobacter dehalogenans
2CP-1]
Length = 285
Score = 36.7 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 16/90 (17%), Positives = 24/90 (26%)
Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
+E Y G AA + Y + A+ RL
Sbjct: 171 EDFTARYPRHPAADNALLESAEAYAAAGRGEAACALVRRTADEYPAGDAMSAALERLAAC 230
Query: 237 YVALALMDEAREVVSLIQERYPQGYWARYV 266
L DE R ++ + YP A+
Sbjct: 231 AARLGHADEERTLLQRLVSDYPGTPAAQRA 260
>gi|197123198|ref|YP_002135149.1| hypothetical protein AnaeK_2795 [Anaeromyxobacter sp. K]
gi|196173047|gb|ACG74020.1| conserved hypothetical protein [Anaeromyxobacter sp. K]
Length = 285
Score = 36.7 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 16/90 (17%), Positives = 24/90 (26%)
Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
+E Y G AA + Y + A+ RL
Sbjct: 171 EDFTARYPRHPAADNALLESAEAYAAAGRGEAACALVRRTADEYPAGDAMSAALERLAAC 230
Query: 237 YVALALMDEAREVVSLIQERYPQGYWARYV 266
L DE R ++ + YP A+
Sbjct: 231 AARLGHADEERTLLQRLVSDYPGTPAAQRA 260
>gi|153007329|ref|YP_001381654.1| hypothetical protein Anae109_4492 [Anaeromyxobacter sp. Fw109-5]
gi|152030902|gb|ABS28670.1| Tetratricopeptide TPR_2 repeat protein [Anaeromyxobacter sp.
Fw109-5]
Length = 279
Score = 36.7 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 15/86 (17%), Positives = 27/86 (31%)
Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243
+ A + + Q SDA A + AY+ L
Sbjct: 98 YPGGKEAREARVQIGDIYRERFRDPLAAIAQYADVAASDAPEAPRYQLEVARAYLELGNW 157
Query: 244 DEAREVVSLIQERYPQGYWARYVETL 269
+AR +++E++P A + L
Sbjct: 158 SQARTEARILREKWPDHALADEAQLL 183
>gi|121533463|ref|ZP_01665291.1| Tetratricopeptide TPR_2 repeat protein [Thermosinus carboxydivorans
Nor1]
gi|121308022|gb|EAX48936.1| Tetratricopeptide TPR_2 repeat protein [Thermosinus carboxydivorans
Nor1]
Length = 957
Score = 36.7 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 24/200 (12%), Positives = 52/200 (26%), Gaps = 6/200 (3%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
E+AV ++ N+ +A + + P + +
Sbjct: 246 EQAVALARQGNYDEAITLLDWLKKQEPNDLSIAFDYITILAWAGHNEAAIKNYEALWTQD 305
Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
+ Y G M P + + ++ + +
Sbjct: 306 IPDYVRIYISDAYRRTGNLEQAMAAIQPVADQGDRKAKVRLAELWLEKGDKAKSYELYDE 365
Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR-----LVEA 236
+ Q + ++R EY A +++ L D E A+ R L A
Sbjct: 366 LLKENKQDIQAYLSRADSSMRRQEYSQAAADYKMALRLIPDDEANS-ALRRRIAGELAAA 424
Query: 237 YVALALMDEAREVVSLIQER 256
++ L +A +
Sbjct: 425 FINLDQPAQAIVALKPYIAN 444
>gi|74612212|sp|Q6WRS2|FIS1_TUBBO RecName: Full=Mitochondria fission 1 protein
gi|33391189|gb|AAQ17209.1| putative mitochondrial fission protein Tbfis1p [Tuber borchii]
Length = 155
Score = 36.7 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 14/112 (12%), Positives = 28/112 (25%), Gaps = 6/112 (5%)
Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
+ + + + Y K +F + A ++ + ++
Sbjct: 1 MPSDNLPHAVDAESPLKEAELQVLRNQYEKEGQFVGVQTKFNYAWGLIKSDKRPEQQMGV 60
Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP 258
F+ E E + L L EAR + E P
Sbjct: 61 RLLTDIFRD------HTERRRECLYYLALGNYKLGNYAEARRYNDRLLENEP 106
>gi|75318818|sp|O82039|SPY_PETHY RecName: Full=Probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SPINDLY; AltName:
Full=PhSPY
gi|3319682|emb|CAA76834.1| SPINDLY protein [Petunia x hybrida]
Length = 932
Score = 36.7 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 27/226 (11%), Positives = 54/226 (23%), Gaps = 15/226 (6%)
Query: 48 LDSVTDVRYQR-EVY-EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV-- 103
+ R E Y V++ + A + +C P +A+ ++ ++
Sbjct: 214 YEKAAIERPMYAEAYCNMGVIYKNRGDLESAIACYERCLAVSPNFEIAKNNMAIALTDLG 273
Query: 104 --------QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
Y + A + + V Y L +
Sbjct: 274 TKVKLEGDINQGVAYYKKALYYNWHYADAMYNLGVAYGEMLKFDMAIVFYELAFHFNPHC 333
Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
+ I + N + + +G Y +G+ AA +
Sbjct: 334 AEACNNLGVIYKDRDNLDKAVECYQMALTIKPNFSQSLNNLGVVYTVQGKMDAAASMIEK 393
Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
+ EA L Y + A E + P
Sbjct: 394 AIIANPTY---AEAYNNLGVLYRDAGNISLAIEAYEQCLKIDPDSR 436
>gi|224534323|ref|ZP_03674901.1| surface-located membrane protein 1 [Borrelia spielmanii A14S]
gi|224514425|gb|EEF84741.1| surface-located membrane protein 1 [Borrelia spielmanii A14S]
Length = 1012
Score = 36.7 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 26/217 (11%), Positives = 63/217 (29%)
Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
+VY Q + Y+ ++ K + + + E F+Q R P A + ++ +
Sbjct: 655 ENVYEKITKLTNNQEDYYKLGIIRFKLKKYEHSIEAFDQTIRLDPKHKKAHNNKGIALMM 714
Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
K ++ + Y + + + Q K +
Sbjct: 715 LNKNKKAIESFEKAIQIDINYDTAYYQKGIAEEKNGNIQQAFTSFKNAYNLNKKTNYALK 774
Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
+ + KG + N E+ I + + E +++ +
Sbjct: 775 AGIVSNNLGNFKKGEAYLSFFNDNVKKPNEIAIYNLSIAKFENNKLKEALEIINKAINLN 834
Query: 224 EHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
E + + A + +L+ E+ P+
Sbjct: 835 PEKSEYLYLKASINLKSENYQNAISLYNLVIEKNPEN 871
Score = 35.9 bits (80), Expect = 6.0, Method: Composition-based stats.
Identities = 18/225 (8%), Positives = 54/225 (24%), Gaps = 7/225 (3%)
Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
+ + + +Y ++ + +A E N+ P L S ++
Sbjct: 793 SFFNDNVKKPNEIAIYNLSIAKFENNKLKEALEIINKAINLNPE-KSEYLYLKASINLKS 851
Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
+ + S ++ L +
Sbjct: 852 ENYQNAISLYNLVIEKNPENTSAYINLAKAYEKSGNKTQAISTLEKIMNKNNKLALNNLG 911
Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
+ Y K + N + + ++ + A + +
Sbjct: 912 ILYKKEKNYQKAIEIFEKAIINSDIEAKYNLATTLIEINDNTRAKDLLKEYTKLKPN--- 968
Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
EA+ L D+ + + +++P ++ ++
Sbjct: 969 NPEALHALGIIEYNENNNDQ---TLRELIKKFPNYKKNENIKKII 1010
>gi|755486|gb|AAA86720.1| mutations in the mouse Tg737 gene cause polycystic kidney disease
[Homo sapiens]
Length = 824
Score = 36.7 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 26/226 (11%), Positives = 63/226 (27%), Gaps = 9/226 (3%)
Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
I F G + V ++ E+ KAV +L+++++++A E +
Sbjct: 389 VIETSFAAGCDWCV-EVVKASQYVELANDLEI-NKAVTYLRQKDYNQAVEILKVLEKKDN 446
Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
A + L + + + + +Y + + + + +
Sbjct: 447 RVKSAAATNLSALYYMGKDFAQASSYADIAVNSDRYNPAALTNKGNTVFANGDYEKAAEF 506
Query: 149 P----YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG 204
+ + L + E+ + A +I Y
Sbjct: 507 YKEALRNDSSCTEALYNIGLTYEKLNRLDEALDCFLKLHAILRNSAEVLYQIANIYELME 566
Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
AI V++ +++L E Y +A +
Sbjct: 567 NPSQAIEWLMQVVSVIPTDPQV---LSKLGELYDREGDKSQAFQYY 609
>gi|307638050|gb|ADN80500.1| competence lipoprotein [Helicobacter pylori 908]
Length = 220
Score = 36.7 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 32/204 (15%), Positives = 68/204 (33%), Gaps = 6/204 (2%)
Query: 15 WAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFS 74
+ +K L I ++ V G + + + Y+ + + N
Sbjct: 1 MRLKHFKIFLFIAMAMIVIG-TGCTNKKKKKDEYNKPAIFW-----YQGILREILFANLE 54
Query: 75 KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
A Y++ + + + +++L +Y A+ +EYI ++ NVDY+
Sbjct: 55 TADNYYSSLQSEHINSPLVPEAMLALGQAHMKKKEYVLASFYFDEYIKRFGTKDNVDYLT 114
Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
+L S+ ++ DQ + + +E+Y NS Y +
Sbjct: 115 FLKLQSHYYAFKNHSKDQEFISNAIVSLGEFIEKYPNSRYRPYVEYMQIKFILGQNELNR 174
Query: 195 EIGRYYLKRGEYVAAIPRFQLVLA 218
I Y KR + + +
Sbjct: 175 AIANVYKKRHKPEGVKRYLERIDE 198
>gi|323345357|ref|ZP_08085580.1| hypothetical protein HMPREF0663_12116 [Prevotella oralis ATCC
33269]
gi|323093471|gb|EFZ36049.1| hypothetical protein HMPREF0663_12116 [Prevotella oralis ATCC
33269]
Length = 382
Score = 36.7 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 19/134 (14%), Positives = 39/134 (29%), Gaps = 2/134 (1%)
Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
Y +Q A + ++ +V + Y + + + L +
Sbjct: 114 TCIYFYSNAKGNKEQEAYEYAMKSQDPLVLQSFLDTYTDASEAHRDSIQAHLT--ALNQI 171
Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
+ + L + D H EEA+ +L A A ++ E +
Sbjct: 172 DKDWTNAVVSNSKMAIEDYLERHPDTPHKEEALHKLDSIDWANAQQANTKDAFVSYLEDH 231
Query: 258 PQGYWARYVETLVK 271
P G + +K
Sbjct: 232 PNGEHVDDAKDGIK 245
>gi|86140915|ref|ZP_01059474.1| TPR repeat protein [Leeuwenhoekiella blandensis MED217]
gi|85832857|gb|EAQ51306.1| TPR repeat protein [Leeuwenhoekiella blandensis MED217]
Length = 254
Score = 36.7 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 26/216 (12%), Positives = 53/216 (24%), Gaps = 25/216 (11%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
K +LTI + + ++G R++Y K NF A E
Sbjct: 1 MKLSLTIIYLLLSFSVIG----------------QTSPRDLYTSGNSNFKSGNFENAIEK 44
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG---------EEYITQYPESKNV 130
+ + + V + + KY A + + +
Sbjct: 45 YTELLKIVEEKTVQKTCYINRGLSYDRLQKYDLAIADFTEAIKLDTTDMASFVDRGLSKM 104
Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
Y + + + L +++RI V +Q
Sbjct: 105 HAGYLEKAKEDYYYVVHKNNNNAMMEAALYWLARIHYSQGKFEEVLKNCDRYFTINSQDP 164
Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
G + AI + + + + A
Sbjct: 165 EMYFISGTANDMLRNFEKAIKDYSNAIEIHPNYVQA 200
>gi|113474480|ref|YP_720541.1| hypothetical protein Tery_0626 [Trichodesmium erythraeum IMS101]
gi|110165528|gb|ABG50068.1| Tetratricopeptide TPR_2 [Trichodesmium erythraeum IMS101]
Length = 2059
Score = 36.7 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 24/204 (11%), Positives = 56/204 (27%), Gaps = 9/204 (4%)
Query: 68 LKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127
L + + A E F + G +L + + + + Y
Sbjct: 1260 LALKRWENAIEKFPEHIGFQTQKGNMLINLSRFDEAESVFQRLIEKFPHQPQGYEGYARL 1319
Query: 128 KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
N + L + I +P+ + + +
Sbjct: 1320 ANHLGNWELALKRWENAINHLPHHFHFYVQKGNVLITLFRYQEAETLFEEL----ISKYP 1375
Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
+ R + ++ A+ +Q + + + + AY+ L D A+
Sbjct: 1376 HQHHGYDGLARVLMHAQKWELALTCWQTAMDKFPNNLVF---LVGKANAYIELHKFDSAQ 1432
Query: 248 EVVSLIQERYPQGYWARYVETLVK 271
++ I +YP + + L K
Sbjct: 1433 DLADRIFRQYPN--YYQQKYGLQK 1454
>gi|313668448|ref|YP_004048732.1| lipoprotein [Neisseria lactamica ST-640]
gi|313005910|emb|CBN87366.1| putative lipoprotein [Neisseria lactamica 020-06]
Length = 253
Score = 36.7 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 30/248 (12%), Positives = 67/248 (27%), Gaps = 8/248 (3%)
Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
F L+ S+ + +G S R + V + + A+ +++ Q++ +A
Sbjct: 3 FKLSKRISLLLVLALGACSTSYRPSRAEKANQVSNIKT--QLAMEYMRGQDYRQATASIE 60
Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
+ P +A + Q + I N +Y ++L G
Sbjct: 61 DALKSDPKNELAWLVRAE-IYQYLKVNDKAQESFRHALSIKPDSAEINNNYGWFLCGRLN 119
Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG---R 198
+D+ +G + A + + +
Sbjct: 120 RPAESMAYFDKALADPTYPTPYIANLNKGICSAKQGQFGLAEAYLERSLASQPQFPPAFK 179
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV--EAYVALALMDEAREVVSLIQER 256
+ + Y +A L+ + AL A E + +Q
Sbjct: 180 ELARTKMLAGQLGDADYYFKKYQSRVEVLQADDLLLGWKIAKALGNAQAAYEYEAQLQAN 239
Query: 257 YPQGYWAR 264
+P +
Sbjct: 240 FPYSEELQ 247
>gi|322435533|ref|YP_004217745.1| hypothetical protein AciX9_1919 [Acidobacterium sp. MP5ACTX9]
gi|321163260|gb|ADW68965.1| hypothetical protein AciX9_1919 [Acidobacterium sp. MP5ACTX9]
Length = 270
Score = 36.7 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 37/93 (39%), Gaps = 3/93 (3%)
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
N+ AK++E+ YY G Y+A++ R + + + D EA L A
Sbjct: 178 HLPKVEDVNEREAKDLEVAHYYFTTGNYLASLNRAKDAVRLFPDDP---EAHYALALAAQ 234
Query: 239 ALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+ ++A + P G A+ E +K
Sbjct: 235 NMKNQEQASAEFQTYLKLDPGGDHAKDAEKALK 267
>gi|42526602|ref|NP_971700.1| hypothetical protein TDE1092 [Treponema denticola ATCC 35405]
gi|41816795|gb|AAS11581.1| conserved hypothetical protein [Treponema denticola ATCC 35405]
Length = 1119
Score = 36.7 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 31/264 (11%), Positives = 73/264 (27%), Gaps = 18/264 (6%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
Y+F I + + +V S + + Y++ + ++ + +A +
Sbjct: 550 YRFVHKILPAAILTTVVLCFIFSIFVLVWQFIYKPVVAEGYYKEGMTSIESGQYERAIKR 609
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
F++ K + L ++ +
Sbjct: 610 FDEAGTYKKKRKWYFKFANAFREKKQFLSAETIYERLLSDFNHDRQGGIEYADMLSTDLR 669
Query: 140 SYAQ----MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
+Y + + R V + L + + + + K T +
Sbjct: 670 NYEKAEKVLKRGVLDYHINDQSTLLALGDVYLDWADEDSTKYEEARKTYASLINLYGSKD 729
Query: 196 IGRYYLKRGEYVAAIPRFQLVLANY------SDAEHAEEAMARLVEAYV--------ALA 241
+ + R L L NY D + E + L + Y +
Sbjct: 730 VFSGRMMRYFIRTDNLAEVLPLKNYFLNKKLPDEDLIELSGYLLEKRYEPKPTDSENLIG 789
Query: 242 LMDEAREVVSLIQERYPQGYWARY 265
+D+ RE++ ++ P+ A Y
Sbjct: 790 KIDDLRELLEKSIKKRPESPEANY 813
>gi|307197750|gb|EFN78899.1| RNA polymerase-associated protein CTR9-like protein [Harpegnathos
saltator]
Length = 1015
Score = 36.7 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 28/199 (14%), Positives = 64/199 (32%), Gaps = 18/199 (9%)
Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
+ +A ++F R A L + G Q+ + + ++
Sbjct: 542 DKGQIYEASDWFKDALRINNEHPDAWSLLGNLHLAKMEWGPGQKKFERILKNPSTSTDAY 601
Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY-------------- 174
++ + + + Q +D ++R L +++ + +
Sbjct: 602 SLIALGNIWLQTLHQSGKDKEREKRHQDRALAMYKQVLRNDPKNIWAANGIGAVLAHKGC 661
Query: 175 VKGARFYVTVGRNQLAAKEVEI---GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231
V AR R A Y+++ ++V+AI ++ L + H E +
Sbjct: 662 VNEARDIFAQVREATAEFCDVWLNIAHIYVEQKQFVSAIQMYENCLRKFYRYHHV-EVLQ 720
Query: 232 RLVEAYVALALMDEAREVV 250
L AY + EA+ +
Sbjct: 721 YLGRAYFKAGKLKEAKLTL 739
>gi|284052144|ref|ZP_06382354.1| lytic transglycosylase, catalytic [Arthrospira platensis str.
Paraca]
Length = 564
Score = 36.7 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 21/221 (9%), Positives = 65/221 (29%), Gaps = 7/221 (3%)
Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
+ + ++ ++++ +++ + + L + + S YQ+
Sbjct: 58 QQLTPEDWENIGFGYWEKMDYARGAIAYSKAPKTPRNMYRHARGLWLGGKIPESRRAYQE 117
Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQ----MIRDVPYDQRATKLMLQYMSRIVER 168
+ E + + + + + + V + + ++++
Sbjct: 118 LIAAFPTQTDPGGEDAGLGRIRLARLVEPREALPLLNQVVENFPNHAAEAVLDRANVLDK 177
Query: 169 YTNSPYVKGARF---YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
++ +R A + + G A + ++ D+E
Sbjct: 178 LGSTETASQSRQLLLSQYSDSEAAAQLRWTLAQQGATAGRLDIASEWARQLVNKNPDSEL 237
Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
A +A L +A + + RYP+ Y+A
Sbjct: 238 APQATFMLGRWARQQGNSKDATKAFEYLLARYPESYYAWRA 278
>gi|116327854|ref|YP_797574.1| TPR repeat-containing protein [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116330738|ref|YP_800456.1| TPR repeat-containing protein [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
gi|116120598|gb|ABJ78641.1| Tetratricopeptide repeat-containing protein [Leptospira
borgpetersenii serovar Hardjo-bovis L550]
gi|116124427|gb|ABJ75698.1| Tetratricopeptide repeat-containing protein [Leptospira
borgpetersenii serovar Hardjo-bovis JB197]
Length = 368
Score = 36.7 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 23/226 (10%), Positives = 53/226 (23%), Gaps = 3/226 (1%)
Query: 39 ERQSSRDVYLDSVTDVRYQREVYE---KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
Q + + Y LF K++++ A EY+++C ++ +
Sbjct: 30 SNQLPKAEAKLKELLEKDPHNTYGLVGMGDLFFKKKSYKSAIEYYHKCIQEDSSNKFSLM 89
Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
L+ + + A + + ++ + +
Sbjct: 90 GLMNCYREMNLLSRVIEVAEDYRHITITDASILSRVADAHRKLKNFKESEIYYMQALQIN 149
Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
+ + Y K A + + + Q
Sbjct: 150 PKDQYVIVGLGHLYFACQKYKDAIHWWEKLLLIQPDNIKILTEIGNSYRKIKDYDEAIQY 209
Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
A+ L E+Y +A + I E P
Sbjct: 210 YHRAAELDRKNFFALYGLAESYRGKKDFHKANQYWERILEFDPDNK 255
>gi|210135563|ref|YP_002302002.1| competence lipoprotein ComL [Helicobacter pylori P12]
gi|210133531|gb|ACJ08522.1| competence lipoprotein ComL [Helicobacter pylori P12]
gi|317179821|dbj|BAJ57607.1| competence lipoprotein [Helicobacter pylori F32]
Length = 220
Score = 36.7 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 33/202 (16%), Positives = 68/202 (33%), Gaps = 6/202 (2%)
Query: 17 YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKA 76
+ +K L I +I V G + + + Y+ + + N A
Sbjct: 3 LKHFKTFLFITMAIIVIG-TGCANKKKKKDEYNKPAIFW-----YQGILREILFANLETA 56
Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
Y++ + + + +++L +Y A+ +EYI ++ NVDY+ +L
Sbjct: 57 DNYYSSLQSEHINSPLVPEAMLALGQAHMKKKEYVLASFYFDEYIKRFGTKDNVDYLTFL 116
Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196
S+ ++ DQ + + +E+Y NS Y + I
Sbjct: 117 KLQSHYYAFKNHSKDQEFISNSIVSLGEFIEKYPNSRYRPYVEYMQIKFILGQNELNRAI 176
Query: 197 GRYYLKRGEYVAAIPRFQLVLA 218
Y KR + + +
Sbjct: 177 ANVYKKRHKPEGVKRYLERIDE 198
>gi|148656760|ref|YP_001276965.1| lytic transglycosylase catalytic subunit [Roseiflexus sp. RS-1]
gi|148568870|gb|ABQ91015.1| Lytic transglycosylase, catalytic [Roseiflexus sp. RS-1]
Length = 833
Score = 36.7 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 14/59 (23%), Positives = 23/59 (38%)
Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
AAI ++ A + + A EA+ R L + A + + RYP A+
Sbjct: 419 AAIQGYRDFAATFPNDSRAPEALRRAAALLDRLGDGEAAAQQRIDLGRRYPSLPLAQEA 477
>gi|75906279|ref|YP_320575.1| hypothetical protein Ava_0054 [Anabaena variabilis ATCC 29413]
gi|75700004|gb|ABA19680.1| TPR repeat protein [Anabaena variabilis ATCC 29413]
Length = 885
Score = 36.7 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 10/72 (13%), Positives = 23/72 (31%)
Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
+L+KF + +R V V + E+ F++A
Sbjct: 23 KLFKFLRLALCFLLALICTVNSPVLARVVTSTDTAQVTSTISLVEQGKALYDTGRFAEAA 82
Query: 78 EYFNQCSRDFPF 89
+ Q ++++
Sbjct: 83 QILQQVAQEYQQ 94
>gi|326428541|gb|EGD74111.1| tetratricopeptide protein [Salpingoeca sp. ATCC 50818]
Length = 528
Score = 36.7 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 14/213 (6%), Positives = 46/213 (21%), Gaps = 7/213 (3%)
Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
V + + + + +A E + + + + +
Sbjct: 49 KVEALGEKHPSTAQTYNNLGSAYYSKGEYDRAIEQYEKALAIRVETLGEKHPSTATTYNN 108
Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM--SYAQMIRDVPYDQRATKLMLQYM 162
+ + + V+ + + + + ++
Sbjct: 109 LGIAYASKGEHDKAIAYHEKALAIRVETLGEKHPSTADTYNNLGNAYNSKGGYNKAIELY 168
Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
+ + + K T A K+ + A + + + +
Sbjct: 169 EKALAIRVETLGEKHPSTSSTYNNLGNAYKKKGQ-YNKAIQLYEKALAIKVEALGEKHPS 227
Query: 223 AEHAEEAMARLVEAYVALALMDEA-REVVSLIQ 254
L AY + D A + +
Sbjct: 228 TAQTYN---NLGSAYYSKGEYDRAIEQYEKALA 257
>gi|298708566|emb|CBJ30651.1| Intraflagellar transport particle protein [Ectocarpus siliculosus]
Length = 703
Score = 36.7 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 29/236 (12%), Positives = 57/236 (24%), Gaps = 7/236 (2%)
Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
+ FL G + + + + + + K + + +A E F +
Sbjct: 357 LAFIYFLEGEFKSADSYADMAIRHNRYNAKALVNKGNCLFMSKEYERAKEIFLEAIGVEV 416
Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
A +L + G QA I E Y M
Sbjct: 417 DCVEAIYNLGLVNIHLGLPGDSLQAFEKLHTIIPNNTEVIYHIANLYEAHMENLPQASKW 476
Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
A I+ R + + + G +
Sbjct: 477 FNILLARVPTDPG---ILSRMGHIANKEDDDSQAYFYHKESYRHYPVNLDVISWLGVWYV 533
Query: 209 AIPRFQLVLANYSDAEHAE--EAMARL--VEAYVALALMDEAREVVSLIQERYPQG 260
++ + + A + E RL + + +A E+ I YP+
Sbjct: 534 KSELYEKAIHYFETAAQIQPTEVKWRLMVTSCFRRMGNYQKALELYEQIHTEYPEN 589
>gi|301095908|ref|XP_002897053.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262108482|gb|EEY66534.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 611
Score = 36.7 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 17/173 (9%), Positives = 43/173 (24%), Gaps = 1/173 (0%)
Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151
L E + K+
Sbjct: 70 NTWWEAYCHFHSGNFGAALSHFEQLIEAGEATATDLKSWRLSRACCLFYLQNFEDAEHTA 129
Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
+++ L + + + ++ I + + A
Sbjct: 130 LSSSRSALCNRLLFLLAHKRQHSEQTLLDRYQQLSRDSVEDQLAIAAASFTQNNFQEAAE 189
Query: 212 RFQLVLANYSDAEHAEEAMA-RLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
++ +LA+ ++ A+ L Y L D A E++++ +P ++A
Sbjct: 190 IYKRLLASSKGSQEGGSALHVYLALCYFRLGYDDVALELLAVYLVGHPDSFFA 242
>gi|291288224|ref|YP_003505040.1| Tetratricopeptide TPR_2 repeat protein [Denitrovibrio acetiphilus
DSM 12809]
gi|290885384|gb|ADD69084.1| Tetratricopeptide TPR_2 repeat protein [Denitrovibrio acetiphilus
DSM 12809]
Length = 858
Score = 36.7 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 24/210 (11%), Positives = 53/210 (25%), Gaps = 8/210 (3%)
Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
A K ++ NQ LM+A + + +
Sbjct: 645 AFSLFKMGMKDQSLTMLNQVE------DKQNPYYLMTAIMLDQLKTDVSPDVFTDNMMGF 698
Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
+ YL+ + Q+ + + +
Sbjct: 699 LVQELENTRPDYLIELLKKYTNNKAYAAQKMYSISKDVFDDLKRESILFDLTQKLDRDEG 758
Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY-SDAEHAEEAMARLVEAYVAL-A 241
+ ++ G Y KR + A + Y E E + L + Y +
Sbjct: 759 TRFDGYEEVYLDTGISYYKRNNFENAATALEKFKLQYSPRDEKRAEGLYYLGKTYRKMQG 818
Query: 242 LMDEAREVVSLIQERYPQGYWARYVETLVK 271
++A + + E P +A + ++
Sbjct: 819 KDEQAVNALMELLESVPGSVYASAARSELE 848
>gi|323698623|ref|ZP_08110535.1| PEP-CTERM system TPR-repeat lipoprotein [Desulfovibrio sp. ND132]
gi|323458555|gb|EGB14420.1| PEP-CTERM system TPR-repeat lipoprotein [Desulfovibrio
desulfuricans ND132]
Length = 884
Score = 36.7 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 32/206 (15%), Positives = 61/206 (29%), Gaps = 5/206 (2%)
Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
Y KA L+E+ F A + + P A K++ +S ++Q + + A
Sbjct: 228 AYAKYIKAQAMLEEKKFDTAAQLAKELRSMAPKMPYADKTVGLSMYLQKNYQEAINAYHK 287
Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP--YDQRATKLMLQYMSRIVERYTNSPY 174
+ YY VG + + +S I+ +
Sbjct: 288 AISIRPDADSYFFLGLSYYAVGDLETAISHLRVAADRADDYLKAREMISMILLQQHRVDE 347
Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234
V A + + +GE AI +++ V N D ++
Sbjct: 348 SMAEARKVLEKDADNVAARMTLADALTMKGETEEAIEQYEAVTKNRPDDSAT---YLKMG 404
Query: 235 EAYVALALMDEAREVVSLIQERYPQG 260
A+ M +A ++ P
Sbjct: 405 ALNYAMGNMKQAETDLARAVTASPDS 430
>gi|302788927|ref|XP_002976232.1| hypothetical protein SELMODRAFT_104828 [Selaginella moellendorffii]
gi|300155862|gb|EFJ22492.1| hypothetical protein SELMODRAFT_104828 [Selaginella moellendorffii]
Length = 781
Score = 36.7 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 20/223 (8%), Positives = 57/223 (25%), Gaps = 2/223 (0%)
Query: 33 CFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV 92
V ++ + V Y A+ L +N+S+A + +
Sbjct: 555 LAWVACSELAAMASPVLGVDMELKFEASYRHALTLLACKNYSEAATSAGELFALCYKYDM 614
Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQ 152
+ + + K A + + S++++ + +
Sbjct: 615 QLHVVKVLLLIAEIHKKSGSAVTGLPYVLGSITLSQSLNLDLLHAASRVSLAELWLDLGA 674
Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
+ L + + + R + + +
Sbjct: 675 DHAQRALDLLQQSLPLVLGHG-SLELRARTNLCIARCYLSSTDFSVATAPELVLDPLQLA 733
Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
+ + D + A EA L + ++ M++ + Q+
Sbjct: 734 AEEFMNL-EDKDQASEAFYLLATTFNSIGRMEDRDKAAEKFQQ 775
>gi|297380560|gb|ADI35447.1| competence lipoprotein (comL) [Helicobacter pylori v225d]
Length = 220
Score = 36.7 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 33/204 (16%), Positives = 68/204 (33%), Gaps = 6/204 (2%)
Query: 15 WAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFS 74
+ +K L I +I V G + + + Y+ + + N
Sbjct: 1 MRLKHFKTFLFITMAIIVIG-TGCTNKKKKKDEYNKPAIFW-----YQGILREILFANLE 54
Query: 75 KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
A Y++ + + + +++L +Y A+ +EYI ++ NVDY+
Sbjct: 55 TADNYYSSLQSEHINSPLVPEAMLALGQAHMKKKEYVLASFYFDEYIKRFGTKDNVDYLT 114
Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
+L S+ ++ DQ + + +E+Y NS Y +
Sbjct: 115 FLKLQSHYYAFKNHSKDQEFISNSIVSLGEFIEKYPNSRYRPYVEYMQIKFILGQNELNR 174
Query: 195 EIGRYYLKRGEYVAAIPRFQLVLA 218
I Y KR + + +
Sbjct: 175 AIANVYKKRHKPEGVKRYLERIDE 198
>gi|224369131|ref|YP_002603295.1| tetratricopeptide (TPR) domain protein [Desulfobacterium
autotrophicum HRM2]
gi|223691848|gb|ACN15131.1| tetratricopeptide (TPR) domain protein [Desulfobacterium
autotrophicum HRM2]
Length = 788
Score = 36.7 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 21/239 (8%), Positives = 60/239 (25%), Gaps = 7/239 (2%)
Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85
+ ++G +++ + T ++ R + + A F A + +
Sbjct: 183 LIKLATCLVMLGKRQEADTLFAIADKTGMQSPRVLVQMADYFFVSGRDEDAEACLVEALK 242
Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
P + L ++ + + + K + Y+
Sbjct: 243 KEPKDLDLKVRLARFYRSTHALERAETVFAALVADDPANLYFKKMVGDIYISLNKLNNAE 302
Query: 146 RDVPYDQRATKLMLQYMSRI----VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
+ + + + + N Y + YL
Sbjct: 303 QVISDMGQLLQKPDPDFEMLQGKYWLFKGNYVYAATHFKSAVDLSPGFFWAHYLLSVAYL 362
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
G+ + L Y D +A+ + + ++ ++E+ P+
Sbjct: 363 MGGQNQLGENSLEDALYFYPD---QPQALLLMASILYKKGKYSLGLDYLNRLKEKAPEN 418
>gi|163802038|ref|ZP_02195934.1| hypothetical protein 1103602000573_AND4_03434 [Vibrio sp. AND4]
gi|159174179|gb|EDP58987.1| hypothetical protein AND4_03434 [Vibrio sp. AND4]
Length = 251
Score = 36.7 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 9/93 (9%), Positives = 29/93 (31%)
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
+F + +A + + + + + +A+ +L +
Sbjct: 159 QFQKDYPDSTYSANSNYWLGQLYFAKKQDKEAVKSFAAVVSDKGSNKRADALVKLGDIAE 218
Query: 239 ALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+A++ + + YP A+ + +K
Sbjct: 219 RNNNDAQAKKYYQQVVDEYPGSASAKVAGSKLK 251
>gi|145492571|ref|XP_001432283.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124399393|emb|CAK64886.1| unnamed protein product [Paramecium tetraurelia]
Length = 457
Score = 36.7 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 22/212 (10%), Positives = 58/212 (27%), Gaps = 4/212 (1%)
Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
+ +EK +F +A + P + A + Q + + +
Sbjct: 191 QAYFEKGNALFYLLDFDQALWCAKKAIDIDPNSDSAYNLQGAALSEQGNTDQAINSFQRA 250
Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
+ E+ + + + + + + S YV
Sbjct: 251 ININPKNSEAHFHLGCLLNQTKIFDKANQHMERALELNPDSPLFYLQKGNLQYYSRYVMK 310
Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD----AEHAEEAMARL 233
++ V ++ R +L++ + I ++ L + + +EA R+
Sbjct: 311 SQLNVIRKHWLQILHKIYKRRQFLEKVMNLYRINHYEESLKCFENVIQINPTNDEAYFRI 370
Query: 234 VEAYVALALMDEAREVVSLIQERYPQGYWARY 265
L +++ E P +
Sbjct: 371 GVVLQHLNGFNKSLEYFKKALSLKPDNQEYKD 402
>gi|329964573|ref|ZP_08301627.1| tetratricopeptide repeat protein [Bacteroides fluxus YIT 12057]
gi|328524973|gb|EGF52025.1| tetratricopeptide repeat protein [Bacteroides fluxus YIT 12057]
Length = 597
Score = 36.7 bits (82), Expect = 3.6, Method: Composition-based stats.
Identities = 28/256 (10%), Positives = 67/256 (26%), Gaps = 9/256 (3%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSR---DVYLDSVTDVRYQRE------VYEKAVLFLKE 70
K + + +AV L + + + + + Y +AV +
Sbjct: 6 MKIKILLLLCMAVWLLSACGTTRRQMRGQLPVTVPSASLTPEQQRKYDYFYLEAVRLKVQ 65
Query: 71 QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
+++ A+ C P A A + + Q A E
Sbjct: 66 KDYDAAFNMLQHCLSIHPNASSALYEMAQYYMFLKKIPQGQAALEKAVENDPDNFWYSQG 125
Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
Y+ + + L + ++E Y + ++
Sbjct: 126 LANLYMQQNEKEKATALLEGMVTRFSSKLDPLYNLLEIYNRQEAYDKVIGILNKLEERMG 185
Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
E + + F+ + + ++ L + Y+ +EA +
Sbjct: 186 KSEQLSMEKFRIYLQKKDDKSAFREIESLVAEYPMDTRYQIVLGDVYMQNGKKEEAYRLY 245
Query: 251 SLIQERYPQGYWARYV 266
+ + P+ A Y
Sbjct: 246 QKVLKEEPENALAMYS 261
>gi|327440185|dbj|BAK16550.1| TRAP-type C4-dicarboxylate transport system, periplasmic
component [Solibacillus silvestris StLB046]
Length = 326
Score = 36.7 bits (82), Expect = 3.6, Method: Composition-based stats.
Identities = 8/53 (15%), Positives = 16/53 (30%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQ 71
+ K + L ++ Y+ +E A+ LKE+
Sbjct: 1 MKKILYIAGLILGSMLLTACSTSDEKEQYVLYAGHSLAADHPFELAMQELKER 53
>gi|169158541|emb|CAQ14425.1| intraflagellar transport 88 homolog [Danio rerio]
gi|190338004|gb|AAI62512.1| Intraflagellar transport 88 homolog [Danio rerio]
Length = 824
Score = 36.7 bits (82), Expect = 3.6, Method: Composition-based stats.
Identities = 23/212 (10%), Positives = 56/212 (26%), Gaps = 6/212 (2%)
Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
D + K ++++ KA E++ + R+ A +L ++ +
Sbjct: 480 ADRYNPAALINKGNTLFVKEDYEKAAEFYKESLRNDSSCTEALYNLGLTYKRLGRLEEAL 539
Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY---DQRATKLMLQYMSRIVER 168
+ + Y + Q I + +L + + +
Sbjct: 540 DCFLKLHAILRNSAQVMYQLANLYEMLEDPHQAIEWLMQLTSVTPTDAQVLAKLGDLYDN 599
Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
+ + + +G YY+ AI F+ +
Sbjct: 600 EGDKSQAFQYYYESYRYFPSNISVIEWLGAYYIDTQFCEKAIQYFERATLIQPTQVKWQ- 658
Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQG 260
+ Y +A E I ++P+
Sbjct: 659 --LMVASCYRRSGNYQKALETYKEIHRKFPEN 688
>gi|90411197|ref|ZP_01219210.1| hypothetical protein P3TCK_06512 [Photobacterium profundum 3TCK]
gi|90328043|gb|EAS44364.1| hypothetical protein P3TCK_06512 [Photobacterium profundum 3TCK]
Length = 361
Score = 36.7 bits (82), Expect = 3.6, Method: Composition-based stats.
Identities = 24/288 (8%), Positives = 71/288 (24%), Gaps = 37/288 (12%)
Query: 14 AWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVY------------ 61
++ L + +A L+G T+ + E+Y
Sbjct: 1 MTIFRKKTQRLILLTVLAPLILLGCASNEKTV----ETTNPNFDHELYDGKATLGLNGDF 56
Query: 62 --EKAVLFLKEQN--FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
E A + + + + A+ ++ + + + + L
Sbjct: 57 PPESAAEAIARGDQAYLNKDTDLALYEYIRALSFPAQDNIDQAYYKIGYIHQQRGNYELA 116
Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
+ + K+ + Y + ++ ++ + + T P
Sbjct: 117 QIAYNRAVIIKDDNIQYSAALGIIELKQGEKKNAEKQLLRAIRMDQQRFKNETWDPTKPD 176
Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
+ + + + + A +Q L + +A+ L +Y
Sbjct: 177 FVQQLEINQTSPLNAYIAYAVIKDLNARHAEAQALYQACLRINHKSR---QALTNLGYSY 233
Query: 238 VALALMDEA--------------REVVSLIQERYPQGYWARYVETLVK 271
+ +A + S + Y + ++
Sbjct: 234 YLSGDLKQAEVINRRATTIYQTDKRAWSNLGLVYIRSKRYSDALDALQ 281
>gi|20090471|ref|NP_616546.1| TPR domain-containing protein [Methanosarcina acetivorans C2A]
gi|19915489|gb|AAM05026.1| TPR-domain containing protein [Methanosarcina acetivorans C2A]
Length = 1885
Score = 36.7 bits (82), Expect = 3.6, Method: Composition-based stats.
Identities = 14/196 (7%), Positives = 47/196 (23%)
Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
+Y A++ + + +A F Q P + L + + +A
Sbjct: 1629 DALYNMALVLFNLEEYEEAARTFEQLLEASPEDPESLNYLGLCLLELEDLKEALKAFEKA 1688
Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
+ + E+ + + + + M+ + +
Sbjct: 1689 ALFNPKNEEALYNAATTLIKLNRIQESLGYFDRILEISPENYDAMNYKGVAFCMLEQYRE 1748
Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
A + + + + + + E ++ L +
Sbjct: 1749 ALKSFDNVLKKDPNNIKAVYNVGVVCFKQKLYETAARAFKEALTINPWHEPSLRYLGLSL 1808
Query: 238 VALALMDEAREVVSLI 253
++A + +
Sbjct: 1809 AKTGDYEDALKAFEKL 1824
Score = 35.2 bits (78), Expect = 9.1, Method: Composition-based stats.
Identities = 14/204 (6%), Positives = 48/204 (23%)
Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
E +++ + +K + + KA FN+ P A ++ + + +
Sbjct: 4 TNDEAFQRGLDLVKRKRYEKAINTFNKILDKDPDHKEALFHRGLALLETEKTQEALDSFN 63
Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
+ ++ + + + + ++ + + +
Sbjct: 64 DALQLEPGNSDALYRKGTCFAALGRFEEALEAYESALESSPDTPEIWYMMGLAFAEMERA 123
Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
+ + G+ + + EA
Sbjct: 124 EASILCFEKALELKPEYTAACCAMGTVAGKAERYEEALEDFERALEISPRNSEAWYAKGL 183
Query: 236 AYVALALMDEAREVVSLIQERYPQ 259
+ + A E + P+
Sbjct: 184 ILAKIEKYENALECFDFLIREKPK 207
>gi|15612357|ref|NP_224010.1| hypothetical protein jhp1292 [Helicobacter pylori J99]
gi|4155904|gb|AAD06874.1| putative [Helicobacter pylori J99]
Length = 220
Score = 36.7 bits (82), Expect = 3.6, Method: Composition-based stats.
Identities = 32/204 (15%), Positives = 68/204 (33%), Gaps = 6/204 (2%)
Query: 15 WAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFS 74
+ +K L I ++ V G + + + Y+ + + N
Sbjct: 1 MRLKHFKTFLFITMAVIVIG-TGCANKKKKKDEYNKPAIFW-----YQGILREILFANLE 54
Query: 75 KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
A Y++ + + + +++L +Y A+ +EYI ++ NVDY+
Sbjct: 55 TADNYYSSLQSEHINSPLVPEAMLALGQAHMKKKEYVLASFYFDEYIKRFGTKDNVDYLT 114
Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
+L S+ ++ DQ + + +E+Y NS Y +
Sbjct: 115 FLKLQSHYYAFKNHSKDQEFISNSIVSLGEFIEKYPNSRYRPYVEYMQIKFILGQNELNR 174
Query: 195 EIGRYYLKRGEYVAAIPRFQLVLA 218
I Y KR + + +
Sbjct: 175 AIANVYKKRHKPEGVKRYLERIDE 198
>gi|326800338|ref|YP_004318157.1| RagB/SusD domain-containing protein [Sphingobacterium sp. 21]
gi|326551102|gb|ADZ79487.1| RagB/SusD domain-containing protein [Sphingobacterium sp. 21]
Length = 570
Score = 36.7 bits (82), Expect = 3.6, Method: Composition-based stats.
Identities = 25/253 (9%), Positives = 58/253 (22%), Gaps = 25/253 (9%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRY-----QREVYEKAVLFLKE--- 70
+ K + I SI++ L + V ++D + + A L
Sbjct: 1 MKKNKIAILISISLLALGSCSKSFLEKVPQGQLSDPQVISSEGVEGLLVGAYALLNGNQD 60
Query: 71 ---QNFSKA--YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP 125
N++ A F + + D G ++
Sbjct: 61 GTWGNYASAPSQWLFGEVASDNAHKGSDGTDQPNMNLIEVYQPTSTNDNLSVMWTRYYEG 120
Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ---YMSRIVERYTNSPYVKGARFYV 182
++ + + L + + + R +
Sbjct: 121 IARCNNTLRVLAADQAGNKTISADRAAQIQGEARMLRAHYYFFLVRVFKNIPYVDENTPP 180
Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242
+ + +V V +P ++ + A EA V Y
Sbjct: 181 DEAKTKPNDTDVY-PMIVADLEFAVENLPVEKINGQVGRVDKMAAEAYLGKVLLYQ---- 235
Query: 243 MDEAREVVSLIQE 255
++ +Q
Sbjct: 236 ----KQYAEALQH 244
>gi|260833076|ref|XP_002611483.1| hypothetical protein BRAFLDRAFT_63882 [Branchiostoma floridae]
gi|229296854|gb|EEN67493.1| hypothetical protein BRAFLDRAFT_63882 [Branchiostoma floridae]
Length = 1622
Score = 36.7 bits (82), Expect = 3.6, Method: Composition-based stats.
Identities = 25/210 (11%), Positives = 51/210 (24%), Gaps = 12/210 (5%)
Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ-------CSRDFPFAGVARKSLLMSA 101
+Y + +++ KA Y+ Q SL
Sbjct: 1091 KETAHPDIATSLYHLGSAWGNLKDYRKAENYYEQSIQMRRSIYGMDTAHPDIAASLHNLG 1150
Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
+ G +++A S E+ + + + + S + + K +
Sbjct: 1151 TAWSNLGDHRKAVSYYEQSLHMRWRISGKETAHPDIATSLYHLGSAWGNLKDYRKA--EN 1208
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
+ S Y + + K Y +
Sbjct: 1209 YYEQSIQMRRSIYGMDTAHFDIATSLDSLGNVWSSLGDHRKAVSYHEQTLHMRW-RIYGK 1267
Query: 222 DAEHAEEA--MARLVEAYVALALMDEAREV 249
D H + A + L EA+ L +A
Sbjct: 1268 DTAHFDIATSLYNLGEAWRNLGDNRKAISY 1297
>gi|260818705|ref|XP_002604523.1| hypothetical protein BRAFLDRAFT_79367 [Branchiostoma floridae]
gi|229289850|gb|EEN60534.1| hypothetical protein BRAFLDRAFT_79367 [Branchiostoma floridae]
Length = 1306
Score = 36.7 bits (82), Expect = 3.6, Method: Composition-based stats.
Identities = 24/216 (11%), Positives = 64/216 (29%), Gaps = 8/216 (3%)
Query: 49 DSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
+ + + ++ KA Y+ Q + + A + G
Sbjct: 906 SDTAHSDFATALTNTGSVLDAMGDYRKAIIYYKQALQMRRSIYGQETAHADIAMSLNNLG 965
Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
S IT + E+ + Y ++ I + + L + ++
Sbjct: 966 AAFHKLSDHSRAITYHEEALQMRRSIYGETTAH-PDIAQSLNNVGSALEKLGDYIKAIDY 1024
Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN----YSDAE 224
Y + + + + +A + +G + + +I F+ L Y +
Sbjct: 1025 YEQALQMYRSVYGENTPHPDIANELNNLGTAWHNLTDETKSIRYFEEALQMYRAIYDQSI 1084
Query: 225 HAEE---AMARLVEAYVALALMDEAREVVSLIQERY 257
+ + L A+ ++ +++A + Y
Sbjct: 1085 ARPDIAATLYNLGSAWDSMGQLEKASSYYEEALQMY 1120
>gi|120612057|ref|YP_971735.1| hypothetical protein Aave_3404 [Acidovorax citrulli AAC00-1]
gi|120590521|gb|ABM33961.1| Tetratricopeptide TPR_2 repeat protein [Acidovorax citrulli
AAC00-1]
Length = 268
Score = 36.7 bits (82), Expect = 3.6, Method: Composition-based stats.
Identities = 25/114 (21%), Positives = 40/114 (35%), Gaps = 14/114 (12%)
Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
+ + +Y S YV ARF++ G +Y AI F+ +
Sbjct: 165 DAVSAFGNFLRQYPRSGYVPSARFWL--------------GNAQYATRDYKEAINNFKAL 210
Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
LA D A EA + + L AR+ + + YPQ A + +
Sbjct: 211 LAASPDHARAPEAALSIANCQIELKDTRAARKTLEDLLRAYPQSEAAAAAKERL 264
>gi|31542563|ref|NP_032955.2| dnaJ homolog subfamily C member 3 precursor [Mus musculus]
gi|73620809|sp|Q91YW3|DNJC3_MOUSE RecName: Full=DnaJ homolog subfamily C member 3; AltName:
Full=Interferon-induced, double-stranded RNA-activated
protein kinase inhibitor; AltName: Full=Protein kinase
inhibitor of 58 kDa; Short=Protein kinase inhibitor p58;
Flags: Precursor
gi|15489336|gb|AAH13766.1| DnaJ (Hsp40) homolog, subfamily C, member 3 [Mus musculus]
gi|74201658|dbj|BAE28450.1| unnamed protein product [Mus musculus]
gi|148668251|gb|EDL00581.1| DnaJ (Hsp40) homolog, subfamily C, member 3 [Mus musculus]
Length = 504
Score = 36.7 bits (82), Expect = 3.6, Method: Composition-based stats.
Identities = 22/258 (8%), Positives = 66/258 (25%), Gaps = 20/258 (7%)
Query: 34 FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93
L + + + + +A+ +++ A + ++ +
Sbjct: 131 VLKSNPSEQEEKEAESQLVKADEMQRLRSQALDAFDGADYTAAITFLDKILEVCVWDAEL 190
Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153
R+ + K + + E+ Y + + +V +
Sbjct: 191 RELRAECFIKEGEPRKAISDLKAASKLKSDNTEAFYKISTLYYQLGDHELSLSEVRECLK 250
Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK----------- 202
+ + + + + ++ A + GR A + E
Sbjct: 251 LDQDHKRCFAHYKQVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPSVAEYTVRSKE 310
Query: 203 -----RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA-REVVSLIQER 256
+ + ++ A+ EAY+ + DEA ++ + +
Sbjct: 311 RICHCFSKDEKPVEAIRICSEVLQMEPDNVNALKDRAEAYLIEEMYDEAIQDYEAAQEHN 370
Query: 257 YPQGYWA---RYVETLVK 271
+ L+K
Sbjct: 371 ENDQQIREGLEKAQRLLK 388
>gi|332828930|gb|EGK01613.1| hypothetical protein HMPREF9455_02145 [Dysgonomonas gadei ATCC
BAA-286]
Length = 1209
Score = 36.7 bits (82), Expect = 3.6, Method: Composition-based stats.
Identities = 16/71 (22%), Positives = 27/71 (38%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
Y K + AI F ++ Y + EE +L+ Y+ L D +
Sbjct: 587 FNMGKIYKDKLEDLPLAIETFNADISRYPATPNLEEIYYQLLLIYMQLGDQDMLAVYRNK 646
Query: 253 IQERYPQGYWA 263
+ +PQG +A
Sbjct: 647 LLTEFPQGQYA 657
>gi|221108660|ref|XP_002157968.1| PREDICTED: similar to O-linked GlcNAc transferase, partial [Hydra
magnipapillata]
Length = 1194
Score = 36.7 bits (82), Expect = 3.6, Method: Composition-based stats.
Identities = 17/212 (8%), Positives = 58/212 (27%), Gaps = 6/212 (2%)
Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR----DFPFAGVARKSLLM 99
+ + ++ + + +A +Y + + + + +
Sbjct: 663 NKLIYPDQIHPSVADSLNNLGEVYRNKGQYDEAIKYIEESLKIKKLIYKDELHPDVAASV 722
Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
+ + K Q ++ ++ + + + + + +
Sbjct: 723 NNLGLAWSDKGQYDEAIKYYKMSLKIDIFFYQDKPHPDISGSFNNLGNAYSAKGKYAKAI 782
Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219
+ + + Y + N L + G+Y L Y ++ +L+ +
Sbjct: 783 KCYEESL-KMRKLIYQNEPHPDIAASFNNLGNAYFDKGQYDLAIMYYEKSLTMKKLIYLD 841
Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
++ L AY D+A + +
Sbjct: 842 KPH-PDVAASLNNLGNAYSNKGQYDQAIKYYN 872
>gi|119510956|ref|ZP_01630078.1| Serine/Threonine protein kinase with TPR repeats [Nodularia
spumigena CCY9414]
gi|119464395|gb|EAW45310.1| Serine/Threonine protein kinase with TPR repeats [Nodularia
spumigena CCY9414]
Length = 699
Score = 36.7 bits (82), Expect = 3.6, Method: Composition-based stats.
Identities = 21/220 (9%), Positives = 48/220 (21%), Gaps = 19/220 (8%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
A K N+ +A + A A + +
Sbjct: 425 NLAWALGKSGNWQQAEIAVTKALELDANCTFAFGLQAWIA--VNQEQWKPAIRAATQAIF 482
Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY------- 174
+ + Y M + + + + + + + + +S +
Sbjct: 483 KSKETPSSDSQILQQWVYPYLIMSLEKAVVTQQARDVERRVQEFISQVPDSAFAFGFQGW 542
Query: 175 -------VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
A + + + + Q+ AN
Sbjct: 543 KKALQGLWNEALSSFEQASRKSQVPAWVLINQGITQEHLQNFSGAIQVYEANNQQVPTHA 602
Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
A+ RL Y L +AR + + + P
Sbjct: 603 LALFRLGTLYGKLGEWTKARFYLEKVIQLKPN---YAEAY 639
>gi|332828114|gb|EGK00832.1| hypothetical protein HMPREF9455_02847 [Dysgonomonas gadei ATCC
BAA-286]
Length = 386
Score = 36.7 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 29/270 (10%), Positives = 67/270 (24%), Gaps = 34/270 (12%)
Query: 19 LYKFALTIFFSIAVCFLVGWE----RQSSRDVYLDSVTDVRYQREVYEK----------- 63
+ K A + S+ + L S+ V +++ +Y +
Sbjct: 1 MKKTACILLISLFILPLSHSGNTLFSHESQVVKPKDDIKKMFEKGLYTEIIEEYGNTPRT 60
Query: 64 ---------AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
A +++ +F A Y + + + A + + +
Sbjct: 61 SSAEELSYVAESYIRLNDFPNASRYADMAIQKDAKSARALYVKGSISSANGNHTQGITDI 120
Query: 115 SLGEEY---ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
+Y Y R ++ + + N
Sbjct: 121 QKAISLAPKQAEYYTGLGDIYFAQDDYTKALTNYRKAVNLPNPSEKAFYMIGAVYANQDN 180
Query: 172 SPYVKGARFYVTVGRNQLAAKE----VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
+ + IG+ Y A ++ + + D +
Sbjct: 181 VKQALDTFYVAKSKIEKDKELYVTVLNNIGKIEFDNKNYKDASEAYRELTEYFPDDYY-- 238
Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERY 257
++ +LVE Y AL A + + Y
Sbjct: 239 -SLEKLVECYNALGYYSRADVSKARLYTAY 267
>gi|308270259|emb|CBX26871.1| hypothetical protein N47_A09000 [uncultured Desulfobacterium sp.]
Length = 337
Score = 36.7 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 37/86 (43%), Gaps = 6/86 (6%)
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV----ALALMD 244
A + + +G Y A++ +++ ++ Y A ++A+ + Y+ AL
Sbjct: 39 PARSTFKEANDFFNQGFYTASLKKYEQIIEKYPTAG--DKALFEMGIIYMYPGNALKDYQ 96
Query: 245 EAREVVSLIQERYPQGYWARYVETLV 270
++ + + + YP+ + E ++
Sbjct: 97 KSLKCFDQLIKNYPESAYRTDSEVMI 122
>gi|24212838|ref|NP_710319.1| TPR-repeat-containing protein [Leptospira interrogans serovar Lai
str. 56601]
gi|24193495|gb|AAN47337.1| TPR-repeat-containing protein [Leptospira interrogans serovar Lai
str. 56601]
Length = 1197
Score = 36.7 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 25/232 (10%), Positives = 60/232 (25%), Gaps = 9/232 (3%)
Query: 39 ERQSSRDVYLDSVTDVRYQREVYEK--AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
L+ T VY+ + +KA YF + P +
Sbjct: 320 GNYRKSVAVLEKATSQFPNNAVYQNQMGLNMKALGEPAKALVYFTRAKELDPTFVEPVTN 379
Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
L+ + ++ A + + +D + D + +
Sbjct: 380 LVFLLISENRYKTARKEAESLKSESEKKQIISFIDVSEQIYEGDRHLRKGDTKIAKTFYE 439
Query: 157 LMLQYMSR--IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
+ + V + + + A + L+ + + + Q
Sbjct: 440 KAKKAFEQEPSVYNAFGRLHFISGELKASEENFKKALSIDKQNIPALQGLIRLYSSQKNQ 499
Query: 215 LVLANYSD-----AEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
+ Y+ + A L Y ++A V +Q+++P
Sbjct: 500 TLANQYTKELENLTGNDPSAAIVLGRTYEDKKEYEKAENVYKNLQKKFPNNE 551
>gi|308050779|ref|YP_003914345.1| beta-lactamase domain protein [Ferrimonas balearica DSM 9799]
gi|307632969|gb|ADN77271.1| beta-lactamase domain protein [Ferrimonas balearica DSM 9799]
Length = 661
Score = 36.7 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 22/187 (11%), Positives = 42/187 (22%), Gaps = 3/187 (1%)
Query: 63 KAVLFLKEQNF-SKAYEYFNQCSRDFPFAGVA-RKSLLMSAFVQYSAGKYQQAASLGEEY 120
+A L+ ++ +A + F+Q F + F+ Y+ +
Sbjct: 323 QARDALRWSHYIDEARQLFDQSEVYFASHHWPLWGQQEIQTFLTQQRDIYKYVHDQTVRW 382
Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK-LMLQYMSRIVERYTNSPYVKGAR 179
Q + V L + + + +
Sbjct: 383 FNQGLNADEVAERITLPDSLAQTWSVRGYHGSLKHNAKAVYQFYLGWYDGNPANLDPLPK 442
Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
L + + +L+ EEA RL Y
Sbjct: 443 ATSASRYVSLMGGAEAVLNAAAAARQEGDYRWAAELLNHLVFAEPDNEEARIRLAAVYRQ 502
Query: 240 LALMDEA 246
L EA
Sbjct: 503 LGYQAEA 509
>gi|229028840|ref|ZP_04184941.1| hypothetical protein bcere0028_9440 [Bacillus cereus AH1271]
gi|228732411|gb|EEL83292.1| hypothetical protein bcere0028_9440 [Bacillus cereus AH1271]
Length = 103
Score = 36.7 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 6/45 (13%), Positives = 15/45 (33%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEK 63
+ KF + +FF + L G + + +++
Sbjct: 1 MKKFGVRLFFIFTLILLGGCTINQKNEEQQIVEKANETAIQYFKE 45
>gi|225552004|ref|ZP_03772944.1| conserved hypothetical protein [Borrelia sp. SV1]
gi|225371002|gb|EEH00432.1| conserved hypothetical protein [Borrelia sp. SV1]
Length = 227
Score = 36.7 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 17/171 (9%), Positives = 49/171 (28%), Gaps = 3/171 (1%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K + +F+ + + ++ + LD + ++Y+K++L + ++KA E
Sbjct: 1 MKKIIIILFYGLIINI---CPTTTTSILKLDEKANKYTIEKLYQKSMLLKDSKKYNKAIE 57
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+ A L ++ + K + + I + +D +
Sbjct: 58 SLTKIINMDKNQADAHLLLSELEYLNKNWKKAIIKSQDYLKIIDFKDKKNFLDISWAYFL 117
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL 189
+ + D + L + +
Sbjct: 118 IGEVKNSMDYIIKFFQSGKELFRENIFIAIDALFKKSIYHFINNENAAFNT 168
>gi|114648903|ref|XP_001147579.1| PREDICTED: intraflagellar transport 88 homolog isoform 2 [Pan
troglodytes]
Length = 680
Score = 36.7 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 21/193 (10%), Positives = 54/193 (27%), Gaps = 7/193 (3%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
KAV +L+++++++A E + A + L + + + +
Sbjct: 313 NKAVTYLRQKDYNQAVEILKVLEKKDSRVKSAAATNLSALYYMGKDFAQASSYADIAVNS 372
Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVP----YDQRATKLMLQYMSRIVERYTNSPYVKG 177
+Y + + + + + + + L + E+
Sbjct: 373 DRYNPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNRLDEALD 432
Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
+ A +I Y AI V++ +++L E Y
Sbjct: 433 CFLKLHAILRNSAEVLYQIANIYELMENPSQAIEWLMQVVSVIPTDPQV---LSKLGELY 489
Query: 238 VALALMDEAREVV 250
+A +
Sbjct: 490 DREGDKSQAFQYY 502
>gi|50083795|ref|YP_045305.1| type 4 fimbrial biogenesis protein [Acinetobacter sp. ADP1]
gi|49529771|emb|CAG67483.1| type 4 fimbrial biogenesis protein [Acinetobacter sp. ADP1]
Length = 266
Score = 36.7 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 30/258 (11%), Positives = 67/258 (25%), Gaps = 14/258 (5%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
L + L G + + V + A ++K + A
Sbjct: 6 INKTLGCAAIVGAFILSGCQTVPTTKDPEKGVKVRT------QLAAEYIKSGDLDSAKRA 59
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
+Q + P A + + + S ++A + E + PE+ Y
Sbjct: 60 LDQALKVNPKDSSANMMMGVLLQQEGSRPNLEKADAYFERAVQLDPENAQAHNNYGTYLY 119
Query: 140 SYAQMIRDVPY--------DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
+ + L+ + RI + +
Sbjct: 120 QMKRYHDAIQQLTLAGSSLGYDQRYRALENIGRIYLHLGGVANAEKMFSQALQANRDSSV 179
Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
+E+ Y + AA ++ + A+ + A A + +V+
Sbjct: 180 SMLELAEIYYLQQRIPAATGMYEQYVRTVGQKNQGARALWIGIRVARANADRTGVQVLVN 239
Query: 252 LIQERYPQGYWARYVETL 269
++ YP + L
Sbjct: 240 QLRIFYPDSSEYQRYLKL 257
>gi|15229253|ref|NP_187074.1| SEC (secret agent); transferase, transferring glycosyl groups
[Arabidopsis thaliana]
gi|75336082|sp|Q9M8Y0|SEC_ARATH RecName: Full=Probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SEC; AltName:
Full=Protein SECRET AGENT
gi|6721161|gb|AAF26789.1|AC016829_13 putative O-linked GlcNAc transferase [Arabidopsis thaliana]
gi|18139887|gb|AAL60196.1|AF441079_1 O-linked N-acetyl glucosamine transferase [Arabidopsis thaliana]
gi|20259324|gb|AAM13988.1| putative O-linked GlcNAc transferase [Arabidopsis thaliana]
gi|21436429|gb|AAM51415.1| putative O-linked GlcNAc transferase [Arabidopsis thaliana]
gi|110742062|dbj|BAE98963.1| O-linked GlcNAc transferase like protein [Arabidopsis thaliana]
gi|332640535|gb|AEE74056.1| putative UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SEC [Arabidopsis
thaliana]
Length = 977
Score = 36.7 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 28/204 (13%), Positives = 57/204 (27%), Gaps = 9/204 (4%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
A ++++ S+A + Q P A +L Q +
Sbjct: 160 NLASAYMRKGRLSEATQCCQQALSLNPLLVDAHSNLGNLMKAQGLIHEAYSCYLEAVRIQ 219
Query: 122 ---TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
+ ++ Q ++ + A + + +
Sbjct: 220 PTFAIAWSNLAGLFMESGDLNRALQYYKEAVKLKPAFPDAYLNLGNVYKALGRPTEAIMC 279
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
+ R A I Y ++G+ AI ++ L+ EA L A
Sbjct: 280 YQHALQMRPNSAMAFGNIASIYYEQGQLDLAIRHYKQALSRDPRFL---EAYNNLGNALK 336
Query: 239 ALALMDEAREVVS---LIQERYPQ 259
+ +DEA + +Q +PQ
Sbjct: 337 DIGRVDEAVRCYNQCLALQPNHPQ 360
>gi|88803527|ref|ZP_01119052.1| TPR-domain containing protein [Polaribacter irgensii 23-P]
gi|88780539|gb|EAR11719.1| TPR-domain containing protein [Polaribacter irgensii 23-P]
Length = 993
Score = 36.7 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 22/239 (9%), Positives = 57/239 (23%), Gaps = 8/239 (3%)
Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99
+ + +++ Y +F K ++ A F + + + LL
Sbjct: 142 KLAKKNLAPLIDDIKYGDDARYYYGFIFYKLGDYEAASAIFKESTETNSYHAEISYYLLD 201
Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
+F + S + + +S+ +
Sbjct: 202 ISFKTGKFERCIAVGSKLLTNVNEKLKSEVSKIIGESYFNLKEYSKAIPYLKIYKGTAKN 261
Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK--------EVEIGRYYLKRGEYVAAIP 211
+ + K + + + K Y A
Sbjct: 262 WNNTDFYQLGYAYYKQKDFKNALDNFNKIIGEKNPVSQNAYYHLGECYLNLNQNAAALNA 321
Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
N++ + A+ +Y + +V+ + YP+ + + LV
Sbjct: 322 FKSASKMNFNKNIQEDAALNYAKLSYEQGNPFELVSDVLQTYLKTYPKSKAYQEINQLV 380
>gi|330922900|ref|XP_003300018.1| hypothetical protein PTT_11155 [Pyrenophora teres f. teres 0-1]
gi|311326033|gb|EFQ91876.1| hypothetical protein PTT_11155 [Pyrenophora teres f. teres 0-1]
Length = 1323
Score = 36.7 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 17/215 (7%), Positives = 53/215 (24%), Gaps = 10/215 (4%)
Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
KA++ + +A+ + R+ + + + + + ++ +
Sbjct: 49 KALILNTQGQGDEAFALCKEALRNDMKSHICWHVYGLLWRSVKNYPEAIKSYKMALRIEP 108
Query: 123 QYPESKNVD---YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
Y + R + ++ + ++ N +
Sbjct: 109 NSLNILRDLALLQCQVRDYEGYIESRRKMMQERPQLRQNWTALAVAYHLSGNYAEAENIL 168
Query: 180 FYVTVGRNQLAAKEV-----EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234
+ K E + + D+ A+
Sbjct: 169 KTYEETLKRPPPKTDLEHSEATLYKNQIIYESGDVERALKHLEEVVRDSLDRGAALELKA 228
Query: 235 EAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
+ + L +EA + ++ R + Y + L
Sbjct: 229 KYLLELGRKEEAEKAYRVLLSR--NSEYRAYFDGL 261
>gi|299141251|ref|ZP_07034388.1| TPR domain-containing protein [Prevotella oris C735]
gi|298577211|gb|EFI49080.1| TPR domain-containing protein [Prevotella oris C735]
Length = 1007
Score = 36.7 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 8/71 (11%), Positives = 20/71 (28%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ + + ++ +Y + +EA L Y + A +
Sbjct: 578 FHSGIIFKDRLDNLDLSEKTLLRLIHDYPNFAQIDEAFYHLYLLYARRNELTRAESYLDR 637
Query: 253 IQERYPQGYWA 263
+ + P W
Sbjct: 638 LHKECPDSKWT 648
>gi|291563428|emb|CBL42244.1| hypothetical protein CK3_27270 [butyrate-producing bacterium
SS3/4]
Length = 200
Score = 36.7 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 8/69 (11%), Positives = 18/69 (26%)
Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
+ + K + L G + + + T + + Y + L E
Sbjct: 4 IFNMKKIITALLTLTMAASLAGCGSKPADEPTKSPETVIESAVDFYTEVWDALGEDRQFA 63
Query: 76 AYEYFNQCS 84
A +
Sbjct: 64 AVGGDAEHE 72
>gi|257470742|ref|ZP_05634832.1| TcmP [Fusobacterium ulcerans ATCC 49185]
gi|317064947|ref|ZP_07929432.1| amino acid-binding protein [Fusobacterium ulcerans ATCC 49185]
gi|313690623|gb|EFS27458.1| amino acid-binding protein [Fusobacterium ulcerans ATCC 49185]
Length = 241
Score = 36.7 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 7/75 (9%), Positives = 16/75 (21%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K S+ + + VY+ E E + + + A
Sbjct: 1 MKKLFKLFMLSLLIVLTAACGASKTEKVYVIGTNAEYPPFEYLEDGKVCGLDADIIAAIA 60
Query: 79 YFNQCSRDFPFAGVA 93
+
Sbjct: 61 QKLNIQYKWSNTNFD 75
>gi|257058729|ref|YP_003136617.1| hypotheticalprotein [Cyanothece sp. PCC 8802]
gi|256588895|gb|ACU99781.1| TPR repeat-containing protein [Cyanothece sp. PCC 8802]
Length = 310
Score = 36.7 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 23/245 (9%), Positives = 68/245 (27%), Gaps = 7/245 (2%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
K + ++ ++ E++++ + ++ ++ +A
Sbjct: 1 MKNQYHALLKFGLILVISLTCFIQPVKATTQISANVKDSELFDQGIEHIENNDYEQALSD 60
Query: 80 FNQCSRDFPFAGVARKSLLM--SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
Q + S + + + + N Y +
Sbjct: 61 LTQVINLGSSLTPSAYSNRCLVNLQLNNNQAAKLDCTEAIKLNPNNTEAYLNGGLADYRL 120
Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
G + + +R + ++ + + Y + Y + ++E G
Sbjct: 121 GNYEQALEQYQQVIERDVDDYRAHYNQGLVNFALEHYEIALQNYEKALDSSRLPSDLEKG 180
Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAE----HAEEAMARLVEAYVALALMDEA-REVVSL 252
Y R + Q +A++++A ++A AY + A + +
Sbjct: 181 IIYHDRALVQLKLGNIQEAIADFTEAINLDNLNDKAYYNRAYAYQKIKNYRAAIADFSEV 240
Query: 253 IQERY 257
I +
Sbjct: 241 IALNH 245
>gi|260063502|ref|YP_003196582.1| TPR repeat protein [Robiginitalea biformata HTCC2501]
gi|88782946|gb|EAR14120.1| TPR repeat protein [Robiginitalea biformata HTCC2501]
Length = 466
Score = 36.7 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 26/210 (12%), Positives = 54/210 (25%), Gaps = 8/210 (3%)
Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
D R + ++A + K+ N A E Q L M +Y
Sbjct: 94 DSRNEEIFIQRANICSKKDNHRGAIELLRQALELSENDFEVYSLLGM----EYLFLDEYG 149
Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
A + + + + Y +
Sbjct: 150 KAQSCFMKCLEADPEDYASLYNVVYCFEFQEDYEGAIRYLNNYLESSPYCQVAWHQLGKQ 209
Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE---- 228
+ + Y ++G+ + + R+Q + NY ++
Sbjct: 210 YDAIDLLEESLAAFDFAIISDDSFLGAYFEKGKVLEKLGRYQEAIENYLVTTRMDDPTSH 269
Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYP 258
A R+ + L + ++AR+ L P
Sbjct: 270 AYLRIGRCHEKLGMEEQARDYYYLTVHEDP 299
>gi|186684446|ref|YP_001867642.1| hypothetical protein Npun_R4324 [Nostoc punctiforme PCC 73102]
gi|186466898|gb|ACC82699.1| TPR repeat-containing protein [Nostoc punctiforme PCC 73102]
Length = 763
Score = 36.7 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 19/202 (9%), Positives = 43/202 (21%), Gaps = 6/202 (2%)
Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
+ Y + + +A ++Q P A + ++ +
Sbjct: 531 KPDDHQAWYNRGIALFNLGRLEEAIASYDQALNFKPDKDNAWNNRGIALVELGRLEEAIA 590
Query: 113 AASLGEEY---ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
+ + Q ++ + + +
Sbjct: 591 SYDQALNFKPDDHQAWYNRGIALFNLGRLEEAIASFDQALNFKPDYHEAWYNRGTALVEL 650
Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
+ ++ G +K AI F L D + A
Sbjct: 651 GRLEEAIASFDQAIKIKSDDHQAWNNWGYALVKLERLEEAIASFDEALKIKPD---KDNA 707
Query: 230 MARLVEAYVALALMDEAREVVS 251
Y L +D A E +
Sbjct: 708 WYNKACCYGLLGNVDLAIENLQ 729
>gi|189463995|ref|ZP_03012780.1| hypothetical protein BACINT_00330 [Bacteroides intestinalis DSM
17393]
gi|189438568|gb|EDV07553.1| hypothetical protein BACINT_00330 [Bacteroides intestinalis DSM
17393]
Length = 573
Score = 36.7 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 25/249 (10%), Positives = 63/249 (25%), Gaps = 14/249 (5%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K + I S + L+ + + ++ YE + F + N+
Sbjct: 1 MKKLRIYIIASALLAVLISC---NENNWLEETPKSFYTPDNSYETSTQFRQSLNYQYDLL 57
Query: 79 YFNQCSRDFPFAGVARKSL-----------LMSAFVQYSAGKYQQAASLGEEYITQYPES 127
Q + G A + +Y+ K + +
Sbjct: 58 RSFQWTLGGLKGGSAEGVIALALGDIAFGGTDYPDGKYNNFKAYFTPTSAPTLLFWQVAY 117
Query: 128 KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
+ ++ + + L + + N +
Sbjct: 118 NAIANANIVINRLELNDKIGIEDKKGFKGEALFFRAYWYNFLANLYGGVPLVLEESSSPR 177
Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
+ + Y R + AI + + + A+ + E Y++L +A
Sbjct: 178 RDYVRATRNETYDQARLDLEEAITLLKDIDGVEDGMISKQAALHVITEVYISLGRYQDAI 237
Query: 248 EVVSLIQER 256
S + +
Sbjct: 238 NAASAVIDN 246
>gi|172036794|ref|YP_001803295.1| soluble lytic transglycosylase [Cyanothece sp. ATCC 51142]
gi|171698248|gb|ACB51229.1| probable soluble lytic transglycosylase [Cyanothece sp. ATCC 51142]
Length = 732
Score = 36.7 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 25/230 (10%), Positives = 69/230 (30%), Gaps = 5/230 (2%)
Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
S RD ++ D + A + + F KA + Q + +
Sbjct: 221 NTNSIRDRLVNDYADQLTPEDWQRIADGYWEVNEFYKAAMAYQQADKSPQNYYRIARGQQ 280
Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY--LVGMSYAQMIRDVPYDQRATK 156
+ L + + + + + + +
Sbjct: 281 VQPPGDNKETVIAAYRQLMFGFPKAEETALALKRLAQLSPPQTAITYLDEIIQKFPEQAP 340
Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ---LAAKEVEIGRYYLKRGEYVAAIPRF 213
L + ++++ R + ++ A ++ + + G+ + A
Sbjct: 341 EALLDKAALLDKLNRKAEAAKVRQTLLSKYSKSDATAEYRWQVAQDAAETGDALKAWTWA 400
Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
Q + N ++ A +A + + L +++A+ + R+P+ Y+A
Sbjct: 401 QPITTNNPESSIAPKAAFWVGKWAQQLGRIEDAQAAFEHVVARHPESYYA 450
>gi|197120080|ref|YP_002140507.1| TPR domain-containing protein [Geobacter bemidjiensis Bem]
gi|197089440|gb|ACH40711.1| TPR domain protein [Geobacter bemidjiensis Bem]
Length = 405
Score = 36.7 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 27/193 (13%), Positives = 56/193 (29%), Gaps = 6/193 (3%)
Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
+ + +++++++A + P A K L + Q + +
Sbjct: 36 GLGYYQKKDYARATGELKRAISMDPTNTQAYKFLASAYQAQGKTDEAIKTYKNSLALDPT 95
Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYD---QRATKLMLQYMSRIVERYTNSPYVKGARF 180
YL Y R+ L + ++ + +
Sbjct: 96 QDSIHTNLGNIYLQQKKYNLAEREFKDAAKLNPTDTLAPYTLGQLYVQTERYGEAETQFK 155
Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
V+ +G Y K G+Y A+ + + E A L AY AL
Sbjct: 156 KVSRMAPTDPNPYYSLGAVYNKEGKYADAVKQLTQAVKLRPK---MEAAHFELGVAYAAL 212
Query: 241 ALMDEAREVVSLI 253
A++ V+ +
Sbjct: 213 GDTTNAQKEVNTL 225
>gi|1353272|gb|AAC52592.1| p58 [Mus musculus]
Length = 504
Score = 36.7 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 21/252 (8%), Positives = 65/252 (25%), Gaps = 20/252 (7%)
Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99
+ + + + +A+ +++ A + ++ + R+
Sbjct: 137 SEQEEKEAESQLVKADEMQRLRSQALDAFDGADYTAAITFLDKILEVCVWDAELRELRAE 196
Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
+ K + + E+ Y + + +V + +
Sbjct: 197 CFIKEGEPRKAISDLKAASKLKSDNTEAFYKISTLYYQLGDHELSLSEVRECLKLDQDHK 256
Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK----------------R 203
+ + + + ++ A + GR A + E
Sbjct: 257 RCFAHYKQVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPSVAEYTVRSKERICHCF 316
Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA-REVVSLIQERYPQGYW 262
+ + ++ A+ EAY+ + DEA ++ + +
Sbjct: 317 SKDEKPVEAIRICSEVLQMEPDNVNALKDRAEAYLIEEMYDEAIQDYEAAQEHNENDQQI 376
Query: 263 A---RYVETLVK 271
+ L+K
Sbjct: 377 REGLEKAQRLLK 388
>gi|308185160|ref|YP_003929293.1| hypothetical protein HPSJM_07080 [Helicobacter pylori SJM180]
gi|308061080|gb|ADO02976.1| hypothetical protein HPSJM_07080 [Helicobacter pylori SJM180]
gi|317014772|gb|ADU82208.1| putative lipoprotein [Helicobacter pylori Gambia94/24]
Length = 220
Score = 36.7 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 32/204 (15%), Positives = 68/204 (33%), Gaps = 6/204 (2%)
Query: 15 WAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFS 74
+ +K L I ++ V G + + + Y+ + + N
Sbjct: 1 MRLKHFKTFLFIAMAVIVIG-TGCANKKKKKDEYNKPAIFW-----YQGILREILFANLE 54
Query: 75 KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
A Y++ + + + +++L +Y A+ +EYI ++ NVDY+
Sbjct: 55 TADNYYSSLQSEHINSPLVPEAMLALGQAHMKKKEYVLASFYFDEYIKRFGTKDNVDYLT 114
Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
+L S+ ++ DQ + + +E+Y NS Y +
Sbjct: 115 FLKLQSHYYAFKNHSKDQEFISNSIVSLGEFIEKYPNSRYRPYVEYMQIKFILGQNELNR 174
Query: 195 EIGRYYLKRGEYVAAIPRFQLVLA 218
I Y KR + + +
Sbjct: 175 AIANVYKKRHKPEGVKRYLERIDE 198
>gi|256845517|ref|ZP_05550975.1| OfeT family oxidase-dependent iron transporter [Fusobacterium sp.
3_1_36A2]
gi|256719076|gb|EEU32631.1| OfeT family oxidase-dependent iron transporter [Fusobacterium sp.
3_1_36A2]
Length = 452
Score = 36.7 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 13/76 (17%), Positives = 26/76 (34%), Gaps = 5/76 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV-----YEKAVLFLKEQNF 73
+ K+ ++F I V L + D ++ A ++KE N+
Sbjct: 15 MKKYFKSLFAFIFVFGLFISFSSMDVEAAQKKKYDTWQDVAKDMNIEFQAAKKYIKEGNY 74
Query: 74 SKAYEYFNQCSRDFPF 89
+AY N+ +
Sbjct: 75 DEAYNAMNKAYFGYYE 90
>gi|239623678|ref|ZP_04666709.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239521709|gb|EEQ61575.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 436
Score = 36.7 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 15/87 (17%), Positives = 24/87 (27%), Gaps = 3/87 (3%)
Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
+ V+ G G A+ FQ L D EA+ + Y
Sbjct: 349 RQDMTANIYQNLVDRGLTLWNAGNKTEAMDYFQASLTIKPD---NPEALFYVGRLYQDAG 405
Query: 242 LMDEAREVVSLIQERYPQGYWARYVET 268
MD A + + +P +
Sbjct: 406 DMDNANTMFDKVVNEFPDSPYVERARN 432
>gi|229087499|ref|ZP_04219632.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
cereus Rock3-44]
gi|228695823|gb|EEL48675.1| Amino acid ABC transporter (Substrate binding protein) [Bacillus
cereus Rock3-44]
Length = 270
Score = 36.7 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 19/202 (9%), Positives = 44/202 (21%), Gaps = 3/202 (1%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K LT + ++ L + + L E+ EKA L+++ +
Sbjct: 1 MKKLLLTALITTSIFGLAACGGKDKDEKKLVVGASNVPHAEILEKAKPLLEKKGIELDIK 60
Query: 79 YFNQCSRDFP---FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
F + ++ + + + + Y
Sbjct: 61 PFQDYVLPNKSLADKELDANYFQHIPYLDKEIKDKGYKFEVAGKIHLEPIGVYSQKYKSL 120
Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
A +I L + +++ VK + L K
Sbjct: 121 KELPDGATIIMSNSVADHGRGLAILQKEGVLKIKDGVDPVKATPKDIAENPKNLKFKTDI 180
Query: 196 IGRYYLKRGEYVAAIPRFQLVL 217
+
Sbjct: 181 EPGLLPQVYNNKEGDAVLINSN 202
>gi|240143897|ref|ZP_04742498.1| putative tetratricopeptide repeat-containing domain protein
[Roseburia intestinalis L1-82]
gi|257204089|gb|EEV02374.1| putative tetratricopeptide repeat-containing domain protein
[Roseburia intestinalis L1-82]
Length = 392
Score = 36.7 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 32/220 (14%), Positives = 68/220 (30%), Gaps = 2/220 (0%)
Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF-VQYSAGKYQ 111
D Y L LK+Q+ A + F + P + + + +
Sbjct: 100 DEENGNAYYLHGCLSLKQQDTDTAKKDFANAVKYNPDDYELYVGIYENLAGNNMTEEGEE 159
Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
+ +YYL+G + ++ + Y++++ E +
Sbjct: 160 YLNKAFDIKGNSAENLTWRGRIYYLLGQYDNAVKELEGAVKKDSAKANLYLAQVYEAEED 219
Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231
S + + + +++G Y AA+ + LA + +E ++
Sbjct: 220 SANAEKYYQAYVDSGTADSVAMNALAEIQMEKGNYEAALEDIRQGLAMDNVTNQ-QELLS 278
Query: 232 RLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+ AY A +VV YP A+ +K
Sbjct: 279 NQIIAYEYSGDFSSAWDVVQQYVSLYPDDEAAQREYIFLK 318
>gi|307152973|ref|YP_003888357.1| TPR repeat-containing protein [Cyanothece sp. PCC 7822]
gi|306983201|gb|ADN15082.1| TPR repeat-containing protein [Cyanothece sp. PCC 7822]
Length = 277
Score = 36.7 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 24/248 (9%), Positives = 60/248 (24%), Gaps = 42/248 (16%)
Query: 19 LYKFALTIFFSIAVCFLVG--------WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKE 70
+ ++ L + + + G + ++ + +KA +
Sbjct: 1 MIRWILILLTVVLIWSGAGNEFRTGGQSAWAEPVVSSSITEQQIKQGEALAQKAFEATDK 60
Query: 71 QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
+F A +Y+ Q FP + + + + + N
Sbjct: 61 GDFPAAEQYWTQLIEQFPTNPAVWSNRGNC--------------RVSQFKLDEAIADFNK 106
Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
Q + ++++ + P
Sbjct: 107 AIELAPDSPDPYLNRGTAFEAQERYSEAIADYNQVLALDPSDP----------------- 149
Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
G G + A+ +Q + + A A + A +EA +
Sbjct: 150 MAYNNRGNAQGSLGHWQEALADYQKAIDIAPNFSF---AQANVALALYETGHKEEATRKM 206
Query: 251 SLIQERYP 258
+ +YP
Sbjct: 207 RSLVRKYP 214
>gi|162451187|ref|YP_001613554.1| hypothetical protein sce2915 [Sorangium cellulosum 'So ce 56']
gi|161161769|emb|CAN93074.1| hypothetical protein sce2915 [Sorangium cellulosum 'So ce 56']
Length = 1289
Score = 36.7 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 9/71 (12%), Positives = 21/71 (29%)
Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
+YY + +E + L Y +++AR+V + +
Sbjct: 196 IKYYTDLKTQYPKYCQSTNAADPAKSTGCTDEVLYYLAYEYEQAQQLEDARKVYFELIKN 255
Query: 257 YPQGYWARYVE 267
+P +
Sbjct: 256 WPNSKYIPNAY 266
>gi|86145859|ref|ZP_01064187.1| acetyltransferase, putative [Vibrio sp. MED222]
gi|85836314|gb|EAQ54444.1| acetyltransferase, putative [Vibrio sp. MED222]
Length = 303
Score = 36.7 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 18/104 (17%), Positives = 34/104 (32%)
Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
+ + + + N A ++I Y +G+ AI + L L+ +
Sbjct: 154 LRKEEKYQESRDLLATLLTDENYAAKAHLQIAWSYDNQGKERQAIEHYVLSLSGVLSSVE 213
Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
+A+ L Y +L L EA YP + +
Sbjct: 214 RFDALFGLASTYRSLGLYAEALGYFEQTMAEYPDSIEVKPFYAM 257
>gi|282901533|ref|ZP_06309455.1| TPR repeat protein [Cylindrospermopsis raciborskii CS-505]
gi|281193576|gb|EFA68551.1| TPR repeat protein [Cylindrospermopsis raciborskii CS-505]
Length = 1280
Score = 36.7 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 24/219 (10%), Positives = 53/219 (24%), Gaps = 11/219 (5%)
Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
Y Y +A+++ N+ +A + + Q A + + +
Sbjct: 679 PDYADAYYNRAIVYYDLGNYQRAIDDYTQSLEIKSNCADAYIGRGTALYKLGDSQGAIND 738
Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY---DQRATKLMLQYMSRIVERYT 170
+ Y ++ N + + I D + + +
Sbjct: 739 FHHALDIDPSYADAYNNRGIVRYELGDHQGAIGDFHHALDIDPSYADAYNNRGIVRYELR 798
Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
++ + + A G + GE AI F S+ E+
Sbjct: 799 DNRGAIEDFNHALNINSNYAQAYNNRGIVRICLGERQLAIEDFTQATIIASNYT---ESY 855
Query: 231 ARLVEAYVALALMDEA-REVVSLIQERYPQGYWARYVET 268
A L +A + + P
Sbjct: 856 INRGYARYELGNRQKAIEDFNQALNIN-PN---YAQAYN 890
Score = 35.5 bits (79), Expect = 8.1, Method: Composition-based stats.
Identities = 21/209 (10%), Positives = 56/209 (26%), Gaps = 9/209 (4%)
Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
+ Y + Y + + + A + + Q ++ +++ Q
Sbjct: 508 NPNYAQAYYGRGIARFNLGDKQGAIDDYTQAINTN---PNYAQAYYNRGIARFNLEDKQG 564
Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
+ + I P Y + ++ V +A + V R
Sbjct: 565 SVDDYTQAININPNYAQAYYAWGMLRSELGDKPEAVNNYTQALNINPDDTETYVARGLTR 624
Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD----AEHAEE 228
+ + + L Y + + I +Q + +Y++ + +
Sbjct: 625 SELGDNQGAIDDYTQALNLNPDYACIYNNRGIV-RSDIADYQRAIDDYTEAINISPDYAD 683
Query: 229 AMARLVEAYVALALMDEA-REVVSLIQER 256
A Y L A + ++ +
Sbjct: 684 AYYNRAIVYYDLGNYQRAIDDYTQSLEIK 712
>gi|229159344|ref|ZP_04287365.1| hypothetical protein bcere0009_1540 [Bacillus cereus R309803]
gi|228624095|gb|EEK80900.1| hypothetical protein bcere0009_1540 [Bacillus cereus R309803]
Length = 271
Score = 36.7 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 28/74 (37%), Gaps = 5/74 (6%)
Query: 4 VLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQRE---- 59
+G+ + +F + K L ++ V VG + + V+ ++E
Sbjct: 3 FVGKGMILFWEGGDVMKKLILISSLALTVGLGVGCSNEKTTKTDEPKKESVQKEKEVAAK 62
Query: 60 -VYEKAVLFLKEQN 72
V++KA K +
Sbjct: 63 DVFKKANDAFKNEE 76
>gi|196010702|ref|XP_002115215.1| hypothetical protein TRIADDRAFT_29035 [Trichoplax adhaerens]
gi|190581986|gb|EDV22060.1| hypothetical protein TRIADDRAFT_29035 [Trichoplax adhaerens]
Length = 1781
Score = 36.7 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 16/190 (8%), Positives = 41/190 (21%), Gaps = 10/190 (5%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
++ + +A + N + A+ Y +
Sbjct: 351 NLGIVLYLLGEYQEALKLHNTHLEKANQTE--DLAEQCLAYGNIGNVYYSLGSYDEAVRY 408
Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
+ + + Y+ S + V + + + F
Sbjct: 409 HKQALLASKNTSDYVAECSTHGNLAIVYQAMHQLEKAESHYRLHLSMAQE--------FN 460
Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
+ + + + + + + D + E A L Y L
Sbjct: 461 DENNELRALNNLGNFYCFLHDYSQAIPYYENYLTLCIDVGDTDGEERAYHCLGYVYYCLN 520
Query: 242 LMDEAREVVS 251
EA +
Sbjct: 521 NYQEAIKYFR 530
>gi|157128485|ref|XP_001661450.1| Anaphase Promoting Complex, putative [Aedes aegypti]
gi|108872562|gb|EAT36787.1| Anaphase Promoting Complex, putative [Aedes aegypti]
Length = 577
Score = 36.7 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 20/199 (10%), Positives = 59/199 (29%), Gaps = 10/199 (5%)
Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR------KSLLMSAFVQYSAGKYQQAASL 116
KA ++ + +S+A + F + + + + + + + ++A +L
Sbjct: 203 KAHAHMQGRKYSEAIQTFRSIEMNTSLSNYHQLLVLVGECYYHNGEYENAYTYLKRAHNL 262
Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
+ + + + + M M++ +
Sbjct: 263 YPYMKNGIQILAILMAKKKKLNELEKMIAPTSTFPMEYSSEMWFVMAQYLYSTAKYDKAV 322
Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
+ A + L+ +Y AI + + E LV+
Sbjct: 323 YFVQKACFLNPKNAEALILKAEILLQLKKYQEAIAHLRFAQQFAP---YRYEVHKVLVDT 379
Query: 237 YVALALMDEAR-EVVSLIQ 254
Y+ + + EA+ + + ++
Sbjct: 380 YLNMNRLREAQAQALKALK 398
>gi|90412131|ref|ZP_01220137.1| hypothetical protein P3TCK_27579 [Photobacterium profundum 3TCK]
gi|90326855|gb|EAS43240.1| hypothetical protein P3TCK_27579 [Photobacterium profundum 3TCK]
Length = 249
Score = 36.7 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 32/86 (37%), Gaps = 1/86 (1%)
Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
A +G+ Y + + A F+ V ++ + +A+ +L ++
Sbjct: 161 STYKANAHYWLGQLYFTQNQLAEASKEFKAVTSD-EKSNKRSDALLKLGVIAERSKDVEL 219
Query: 246 AREVVSLIQERYPQGYWARYVETLVK 271
A++ + YP +R E +K
Sbjct: 220 AKKYYQEVISTYPSSTSSRQAEGSLK 245
>gi|330509104|ref|YP_004385532.1| TPR-repeat-containing protein [Methanosaeta concilii GP-6]
gi|328929912|gb|AEB69714.1| TPR-repeat protein [Methanosaeta concilii GP-6]
Length = 438
Score = 36.7 bits (82), Expect = 3.9, Method: Composition-based stats.
Identities = 16/141 (11%), Positives = 34/141 (24%), Gaps = 10/141 (7%)
Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
+ + + I +AV F++ V Y++ + + N+ A
Sbjct: 14 KKMRAWMRIPLILAVLFVLCLAA----------VAQENTADSWYQEGLKLMGNDNYRDAL 63
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
F++ P + + E + + D +LV
Sbjct: 64 IAFDKAIEIDPENASIWMGKGDVLVRMGDYNESLKIYENALEMAEKTTQDNPHDARGWLV 123
Query: 138 GMSYAQMIRDVPYDQRATKLM 158
I A
Sbjct: 124 KGELFIRIFKNDEAINAYSRA 144
>gi|254785745|ref|YP_003073174.1| tetratricopeptide repeat domain-containing protein [Teredinibacter
turnerae T7901]
gi|237684440|gb|ACR11704.1| tetratricopeptide repeat domain protein [Teredinibacter turnerae
T7901]
Length = 933
Score = 36.7 bits (82), Expect = 3.9, Method: Composition-based stats.
Identities = 10/60 (16%), Positives = 21/60 (35%)
Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
A L ++ DA + + + + L EA E + + E++P +
Sbjct: 115 KAANLLSTSLHDFPDAPNNDNTLYQYARTLDQLGRGGEAVEALHTLVEKHPDSELYAEAQ 174
>gi|238763547|ref|ZP_04624508.1| Type IV pilus bioproteinsis/stability protein PilW [Yersinia
kristensenii ATCC 33638]
gi|238698179|gb|EEP90935.1| Type IV pilus bioproteinsis/stability protein PilW [Yersinia
kristensenii ATCC 33638]
Length = 239
Score = 36.7 bits (82), Expect = 3.9, Method: Composition-based stats.
Identities = 32/241 (13%), Positives = 68/241 (28%), Gaps = 17/241 (7%)
Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90
A + G S V + R + + +L + + + A + + P
Sbjct: 2 AGVLVAGCSGSSPEKVSQSTAGQTRL-----QLGLEYLAQGDLNAARQNLEKAVAADPQD 56
Query: 91 GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150
++ L AF + G+ A ++ + P + V Y S Q +
Sbjct: 57 ---YRAQLGMAFYEQRIGENSAAEQRYQQAMKLAPGNGTVLNNYGAFLCSLGQYVSAQQQ 113
Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN------QLAAKEVEIGRYYLKRG 204
A ++ + N+ Y R + + E +R
Sbjct: 114 FSAAVLS--PDYGQVADSLENAGYCFLRANQNDQARVLLSRALKYDPDKGEPLLAEAQRH 171
Query: 205 EYVAAIPRFQLVLANYSDA-EHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
+ QL+L Y + E++ + D + + +PQ
Sbjct: 172 FGEGNRAQAQLLLDVYQHILPASAESLWLQIRFAALAGRQDSVQRYGKQLARSFPQSKQY 231
Query: 264 R 264
+
Sbjct: 232 Q 232
>gi|171912386|ref|ZP_02927856.1| hypothetical protein VspiD_14440 [Verrucomicrobium spinosum DSM
4136]
Length = 329
Score = 36.7 bits (82), Expect = 3.9, Method: Composition-based stats.
Identities = 10/61 (16%), Positives = 23/61 (37%)
Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
K G+ ++ + L ++ + + L +AL D A + +++ YP
Sbjct: 99 WKEGKKESSTEVLKEFLKSHPEHTLHATTLLALGSKQMALGDKDGATQSFETLKKSYPDS 158
Query: 261 Y 261
Sbjct: 159 E 159
>gi|160874902|ref|YP_001554218.1| tol-pal system protein YbgF [Shewanella baltica OS195]
gi|160860424|gb|ABX48958.1| tol-pal system protein YbgF [Shewanella baltica OS195]
gi|315267139|gb|ADT93992.1| tol-pal system protein YbgF [Shewanella baltica OS678]
Length = 249
Score = 36.7 bits (82), Expect = 3.9, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 33/79 (41%), Gaps = 2/79 (2%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
LK +Y AIP F+ + Y D+ +A A L + + EA++
Sbjct: 130 YESAVNLVLKERKYDDAIPAFRAFIKQYPDSVYAANANYWLGQLLFNKSEFAEAKQAFKT 189
Query: 253 IQERYPQGYWARYVETLVK 271
+ +R+ + ++LVK
Sbjct: 190 VVDRFSDSN--KRGDSLVK 206
>gi|17560436|ref|NP_504200.1| hypothetical protein F32D1.3 [Caenorhabditis elegans]
gi|2291234|gb|AAB65353.1| Hypothetical protein F32D1.3 [Caenorhabditis elegans]
Length = 774
Score = 36.7 bits (82), Expect = 3.9, Method: Composition-based stats.
Identities = 18/220 (8%), Positives = 49/220 (22%), Gaps = 19/220 (8%)
Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
+ + S +V + ++ ++ + A ++ Q + A +L +
Sbjct: 420 KTEESLFKSALEVNPTKANMNLGYVYTTQKKYELAKYHYRQALKRQGNLADAWYNLGILT 479
Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
+ + +++ L +
Sbjct: 480 SKTSNNSNGSIHCYQMALQSRSTYAAAHLNLALLLHDAGHHMAAFSHLDKCLNNTGEFLK 539
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
+ + + R G +A + E+ +
Sbjct: 540 FYHVNRKTQATCAFNKGRLLQKSGNFHVAIENFELA------------------LKLGGP 581
Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVV-SLIQERYPQG 260
EH + + Y L A + I E +
Sbjct: 582 HFEHTPSVLNSMGTCYNELGDEQSAEKFFGKAIGENHVNS 621
>gi|325971202|ref|YP_004247393.1| hypothetical protein SpiBuddy_1374 [Spirochaeta sp. Buddy]
gi|324026440|gb|ADY13199.1| hypothetical protein SpiBuddy_1374 [Spirochaeta sp. Buddy]
Length = 229
Score = 36.7 bits (82), Expect = 3.9, Method: Composition-based stats.
Identities = 6/46 (13%), Positives = 16/46 (34%)
Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
A +A+ D A+ + +++P +A+ +
Sbjct: 181 EAPKALFGQARLQEKSGNTDLAKATFQQLADQFPTSEFAKIATNRL 226
>gi|229142975|ref|ZP_04271415.1| hypothetical protein bcere0012_1550 [Bacillus cereus BDRD-ST24]
gi|228640472|gb|EEK96862.1| hypothetical protein bcere0012_1550 [Bacillus cereus BDRD-ST24]
Length = 254
Score = 36.7 bits (82), Expect = 3.9, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 22/59 (37%), Gaps = 5/59 (8%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV-----YEKAVLFLKEQN 72
+ K L +AV VG + ++ V+ ++E+ + KA K +
Sbjct: 1 MKKNILISSLVLAVGLGVGCSNEKAKKTDEPKKEAVQKEKELTAKDVFNKANEAFKNEE 59
>gi|13473328|ref|NP_104895.1| hypothetical protein mll3886 [Mesorhizobium loti MAFF303099]
gi|14024077|dbj|BAB50681.1| mll3886 [Mesorhizobium loti MAFF303099]
Length = 370
Score = 36.7 bits (82), Expect = 3.9, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 30/82 (36%)
Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
+ A +G L + +Y A F +Y A+ A + + +L +
Sbjct: 271 DHISRFPRDAKAADAHYWLGESLLGQQKYRDAAEVFLAASKDYPKAKKAPDMLLKLGVSL 330
Query: 238 VALALMDEAREVVSLIQERYPQ 259
V L D A S + +RYP
Sbjct: 331 VGLKQHDVACATFSEVGKRYPD 352
>gi|326795241|ref|YP_004313061.1| tol-pal system protein YbgF [Marinomonas mediterranea MMB-1]
gi|326546005|gb|ADZ91225.1| tol-pal system protein YbgF [Marinomonas mediterranea MMB-1]
Length = 270
Score = 36.7 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 12/69 (17%), Positives = 23/69 (33%), Gaps = 1/69 (1%)
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ-G 260
+ ++ A F + Y A L E + L +EA +++ ++P
Sbjct: 161 REKKFEEAAQAFDDFVLVYPSNTLTGNAHYWLGELKLVLGKPEEALNEFNMVVTQFPNHS 220
Query: 261 YWARYVETL 269
A L
Sbjct: 221 KVADATYKL 229
Score = 36.3 bits (81), Expect = 4.9, Method: Composition-based stats.
Identities = 12/81 (14%), Positives = 28/81 (34%)
Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
V +G L G+ A+ F +V+ + + +A +L
Sbjct: 173 DDFVLVYPSNTLTGNAHYWLGELKLVLGKPEEALNEFNMVVTQFPNHSKVADATYKLGIV 232
Query: 237 YVALALMDEAREVVSLIQERY 257
L +EA++ + + ++
Sbjct: 233 NDQLGNKEEAKQFLQKVVSQF 253
>gi|262373264|ref|ZP_06066543.1| conserved hypothetical protein [Acinetobacter junii SH205]
gi|262313289|gb|EEY94374.1| conserved hypothetical protein [Acinetobacter junii SH205]
Length = 572
Score = 36.7 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 16/220 (7%), Positives = 54/220 (24%), Gaps = 5/220 (2%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
+ + ++ + + LK + A + ++ P + + + ++
Sbjct: 110 EQEPKDVPALFYLSHIALKTHEYELAAKTLDKILNIDPTSDLEQILAGIAPENAQDREIL 169
Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
A E + A + +R+ M +
Sbjct: 170 LNALRASTEKDNPSILALIAGLEAQDGLYEQALKNINRALRKRSKSTSFILMKANLLMAL 229
Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
+ + + + + + + D +AEEA+
Sbjct: 230 QDD--EATQKWFAKASRKNKENLDIRLAEARYYIKINDQQTALEKLEDVIKDHPNAEEAL 287
Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
+ L ++A + + ++ + +
Sbjct: 288 FIAGLTSIDLKQYEKAEQYLVDLR---NSSKYQNEAYYYL 324
>gi|262171201|ref|ZP_06038879.1| TPR repeat-containing protein [Vibrio mimicus MB-451]
gi|261892277|gb|EEY38263.1| TPR repeat-containing protein [Vibrio mimicus MB-451]
Length = 253
Score = 36.7 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 11/92 (11%), Positives = 31/92 (33%)
Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
F + +A + + + + ++ D+ +A+ +L +
Sbjct: 162 FQTDYPNSTFSANSHYWLGQLYFAKKEDKEAAKSFIAVVSHQDSNKRADALVKLGDIAKR 221
Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETLVK 271
++AR+ + YP A+ + +K
Sbjct: 222 NNNAEQARKFYQQAIDEYPDSASAKVAKESLK 253
>gi|242279894|ref|YP_002992023.1| hypothetical protein Desal_2428 [Desulfovibrio salexigens DSM 2638]
gi|242122788|gb|ACS80484.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio salexigens
DSM 2638]
Length = 794
Score = 36.7 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 24/204 (11%), Positives = 53/204 (25%), Gaps = 12/204 (5%)
Query: 67 FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126
++ + +A P + ++ + + E+ +
Sbjct: 307 YMAQGRQEEAIRVLLDGVALDPEGTESSDYVVYRKQLATMYLDMNEPNKAIEQLDSVIEL 366
Query: 127 SKNVDYVYYLVGMSY---------AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
+ +YL G Y R V D + ++R +
Sbjct: 367 NPKDAEAHYLRGQIYLLEGRGNLAVSEFRQVVRDNPESAPAYVLLARAHLVNGETNIAIE 426
Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
A + YL R ++ AI Q + D +A + + Y
Sbjct: 427 NLKEAINLEPGYAPAREVLINTYLDRKDWHQAILELQRLREKRPDDIQI---LAAIGDVY 483
Query: 238 VALALMDEAREVVSLIQERYPQGY 261
+ A + + E++P
Sbjct: 484 SIKGDKNLASRTYNELSEKFPDSP 507
>gi|222100626|ref|YP_002535194.1| Tetratricopeptide TPR_2 repeat protein [Thermotoga neapolitana DSM
4359]
gi|221573016|gb|ACM23828.1| Tetratricopeptide TPR_2 repeat protein [Thermotoga neapolitana DSM
4359]
Length = 379
Score = 36.7 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 32/93 (34%), Gaps = 2/93 (2%)
Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY--SDAEHAEEAMARLVEAYV 238
R + A +G + R EY AI RF L + + ++ +Y
Sbjct: 285 PSKESRIERAKSLWFLGYMFYLRREYDEAIRRFDLAIEEIGEENVYFKDDVYYYRALSYY 344
Query: 239 ALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+ AR + E++P + E +K
Sbjct: 345 FKGDLSTARRLFEDFIEKFPDSEYTDDAEYFLK 377
>gi|326336160|ref|ZP_08202332.1| C-terminal processing peptidase [Capnocytophaga sp. oral taxon 338
str. F0234]
gi|325691669|gb|EGD33636.1| C-terminal processing peptidase [Capnocytophaga sp. oral taxon 338
str. F0234]
Length = 697
Score = 36.7 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 16/225 (7%), Positives = 53/225 (23%), Gaps = 4/225 (1%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
K + I F + + + Y + + Y + +Q AY
Sbjct: 1 MKKNIFILFLLGIISFASCSFTDKKFEYTGDREKLLMEIIQYMISRGHYDQQPLDDAYSK 60
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
+ + + +K + + + + ++ + +
Sbjct: 61 --RVFKGYLQYLDPQKRYFIQSDINEFKKNETKMDDDLKKMDVSFFTLTYNRLRQRMEEA 118
Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
+ + K + + + ++ + +
Sbjct: 119 DKLSQELLKESYEFSKKESVDLDYENIPYTKDKKGLRERWRKLIKYSILSNLVIKQKEEQ 178
Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244
+ K + ++ + E +A + +Y L D
Sbjct: 179 HKKEKDSKYTEKSYKELKKE--ATETTRKAFEEMFVSYKDLTEED 221
>gi|319781029|ref|YP_004140505.1| tol-pal system protein YbgF [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317166917|gb|ADV10455.1| tol-pal system protein YbgF [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 369
Score = 36.7 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 18/76 (23%), Positives = 30/76 (39%)
Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243
+ A +G L + +Y A F +Y A+ A + + +L + V L
Sbjct: 276 PKDAKAADAHYWLGESLLGQQKYRDAAETFLAASKDYPKAKKAPDMLLKLGVSLVGLKQH 335
Query: 244 DEAREVVSLIQERYPQ 259
D A S + +RYP
Sbjct: 336 DVACATFSEVGKRYPD 351
>gi|257457386|ref|ZP_05622557.1| cyclic nucleotide-binding protein [Treponema vincentii ATCC 35580]
gi|257445308|gb|EEV20380.1| cyclic nucleotide-binding protein [Treponema vincentii ATCC 35580]
Length = 344
Score = 36.7 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 24/202 (11%), Positives = 53/202 (26%), Gaps = 4/202 (1%)
Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
+ +DS + ++ A F K Q++ A + + +P ++
Sbjct: 115 ESLMDSKQQTNNEDGLFTVATAFYKSQHYQAAAQVAARYRALYPAGKHLG-AIGPIIANS 173
Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
+ + + Q + +L
Sbjct: 174 TQMAGRSFGEARQPGSMDSSSSGQPTGSASIPASGPVQQAQLNDASVDLTFQLAED---L 230
Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
+ + Y + +L A + R K+ EYV I + + +
Sbjct: 231 VKQEKWADAYKQYHTIIEMKQGTKLEAAYLGAARCLYKQAEYVRCIQLGTGFITQFPKSL 290
Query: 225 HAEEAMARLVEAYVALALMDEA 246
E + L Y + D+A
Sbjct: 291 KLAEILMLLGLCYQGMDRPDKA 312
>gi|226229318|ref|YP_002763424.1| hypothetical protein GAU_3912 [Gemmatimonas aurantiaca T-27]
gi|226092509|dbj|BAH40954.1| hypothetical protein [Gemmatimonas aurantiaca T-27]
Length = 308
Score = 36.7 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 9/67 (13%), Positives = 20/67 (29%), Gaps = 7/67 (10%)
Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG------- 260
A ++ ++ + +A+ RL E + +AR + +P
Sbjct: 83 DAERDWKRLVIEAPLSPRTPDALLRLGELDMLRGHPADARPYFERVVREFPDSTRIARGT 142
Query: 261 YWARYVE 267
W
Sbjct: 143 IWLVRSY 149
>gi|221125376|ref|XP_002159787.1| PREDICTED: similar to Tetratricopeptide repeat protein 28 [Hydra
magnipapillata]
Length = 1804
Score = 36.7 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 10/207 (4%), Positives = 43/207 (20%), Gaps = 2/207 (0%)
Query: 47 YLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ--CSRDFPFAGVARKSLLMSAFVQ 104
Y D + + + + + +A + + F S
Sbjct: 869 YYDKDNHPSFAESLNNLGIAYDAKGQHDEAKRCYEKGLSITKIIFQSEPHSSNAALFTNL 928
Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
++ Y + + +
Sbjct: 929 GLNYFFKGLYDQAIMYYNDSLNLSKRIHRDQPHPDIVYSLNNLGLVNTIKGNYAHALSYY 988
Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
+ + Y + + + + ++ + +
Sbjct: 989 NQGLNMTELIYQDHLHPEVAAFLNNLGSIYHVNGQYNEAIHFYEESIKVKELIYHNENHP 1048
Query: 225 HAEEAMARLVEAYVALALMDEAREVVS 251
+++ + +Y++ L ++A +
Sbjct: 1049 SIADSLNNIGLSYISKGLYEQALDYFE 1075
>gi|89053468|ref|YP_508919.1| hypothetical protein Jann_0977 [Jannaschia sp. CCS1]
gi|88863017|gb|ABD53894.1| hypothetical protein Jann_0977 [Jannaschia sp. CCS1]
Length = 281
Score = 36.7 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 24/79 (30%)
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
A G + + A F + D A A+ L A + +EA
Sbjct: 195 ADAHYLRGEAEVNLDRWNPAARAFLASFSAAPDGPRAPIALTSLGVALAQIGQPEEACLT 254
Query: 250 VSLIQERYPQGYWARYVET 268
+S + RYP +
Sbjct: 255 LSEVGVRYPGSASVADAQA 273
>gi|115526689|ref|YP_783600.1| TPR repeat-containing protein [Rhodopseudomonas palustris BisA53]
gi|115520636|gb|ABJ08620.1| Tetratricopeptide TPR_2 repeat protein [Rhodopseudomonas palustris
BisA53]
Length = 336
Score = 36.7 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 15/66 (22%), Positives = 29/66 (43%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ +G + +R +Y + F V Y + A +A+ RL ++ AL + A
Sbjct: 252 QYWLGESFFQRQQYRDSAEAFLAVTTKYETSAKAADALLRLGQSLAALKEKEAACAAFGE 311
Query: 253 IQERYP 258
+ +YP
Sbjct: 312 VARKYP 317
>gi|330812520|ref|YP_004356982.1| hypothetical protein PSEBR_a5463 [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327380628|gb|AEA71978.1| conserved hypothetical protein; putative lipoprotein [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
Length = 466
Score = 36.3 bits (81), Expect = 4.0, Method: Composition-based stats.
Identities = 34/258 (13%), Positives = 67/258 (25%), Gaps = 16/258 (6%)
Query: 19 LYKFALTIFFSIA--VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQN---- 72
++ + +F + L G + D L V + A+ L++ N
Sbjct: 1 MFMASRAVFSVALGAITLLSGCSAFRNYDSELAQTNQQLASGNV-DGALTLLEKNNTSQD 59
Query: 73 ----FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
+ + D + A S A K A L + +
Sbjct: 60 KDLLYYFEKGELLRAKGDLSGSQTAWTSADQQVGQWEDAVKLDTAKYLAQFGSFLVNDKV 119
Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
Y + + +I + + + R + R +
Sbjct: 120 RRYEGYDYEKVMLTTQMALNLLAVNDFDGART---QIKKTHEREAVIADLRDKEYLKREE 176
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
A K+ Y +G VA++ ++V ++ + + Y AL D A
Sbjct: 177 DAEKQGVKTEYKDLKGYPVASLDAPEVVSLK--NSYQSAFSHYLAGFVYEALGEKDLAAP 234
Query: 249 VVSLIQERYPQGYWARYV 266
E P
Sbjct: 235 GYRKAAELRPNTPLLEQA 252
>gi|308062663|gb|ADO04551.1| hypothetical protein HPCU_07045 [Helicobacter pylori Cuz20]
Length = 220
Score = 36.3 bits (81), Expect = 4.0, Method: Composition-based stats.
Identities = 33/204 (16%), Positives = 68/204 (33%), Gaps = 6/204 (2%)
Query: 15 WAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFS 74
+ +K L I +I V G + + + Y+ + + N
Sbjct: 1 MRLKHFKTFLFITMAIIVIG-TGCTNKKKKKDEYNKPAIFW-----YQGILREILFANLE 54
Query: 75 KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
A Y++ + + + +++L +Y A+ +EYI ++ NVDY+
Sbjct: 55 TADNYYSSLQSEHINSPLLPEAMLALGQAHMKKKEYVLASFYFDEYIKRFGTKDNVDYLT 114
Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
+L S+ ++ DQ + + +E+Y NS Y +
Sbjct: 115 FLKLQSHYYAFKNHSKDQEFISNSIVSLGEFIEKYPNSRYRPYVEYMQIKFILGQNELNR 174
Query: 195 EIGRYYLKRGEYVAAIPRFQLVLA 218
I Y KR + + +
Sbjct: 175 AIANVYKKRHKPEGVKRYLERIDE 198
>gi|59801025|ref|YP_207737.1| hypothetical protein NGO0595 [Neisseria gonorrhoeae FA 1090]
gi|239999169|ref|ZP_04719093.1| hypothetical protein Ngon3_06780 [Neisseria gonorrhoeae 35/02]
gi|240013923|ref|ZP_04720836.1| hypothetical protein NgonD_04613 [Neisseria gonorrhoeae DGI18]
gi|240016365|ref|ZP_04722905.1| hypothetical protein NgonFA_04209 [Neisseria gonorrhoeae FA6140]
gi|240080484|ref|ZP_04725027.1| hypothetical protein NgonF_04107 [Neisseria gonorrhoeae FA19]
gi|240113148|ref|ZP_04727638.1| hypothetical protein NgonM_06176 [Neisseria gonorrhoeae MS11]
gi|240115904|ref|ZP_04729966.1| hypothetical protein NgonPID1_06614 [Neisseria gonorrhoeae PID18]
gi|240118202|ref|ZP_04732264.1| hypothetical protein NgonPID_07041 [Neisseria gonorrhoeae PID1]
gi|240121492|ref|ZP_04734454.1| hypothetical protein NgonPI_06943 [Neisseria gonorrhoeae PID24-1]
gi|240123750|ref|ZP_04736706.1| hypothetical protein NgonP_07404 [Neisseria gonorrhoeae PID332]
gi|240125941|ref|ZP_04738827.1| hypothetical protein NgonSK_06942 [Neisseria gonorrhoeae SK-92-679]
gi|240128453|ref|ZP_04741114.1| hypothetical protein NgonS_07456 [Neisseria gonorrhoeae SK-93-1035]
gi|254493941|ref|ZP_05107112.1| ftype IV pilus assembly protein [Neisseria gonorrhoeae 1291]
gi|260440281|ref|ZP_05794097.1| hypothetical protein NgonDG_04171 [Neisseria gonorrhoeae DGI2]
gi|268595000|ref|ZP_06129167.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02]
gi|268596620|ref|ZP_06130787.1| type IV pilus assembly protein [Neisseria gonorrhoeae FA19]
gi|268599228|ref|ZP_06133395.1| type IV pilus assembly protein [Neisseria gonorrhoeae MS11]
gi|268601575|ref|ZP_06135742.1| type IV pilus assembly protein [Neisseria gonorrhoeae PID18]
gi|268603914|ref|ZP_06138081.1| type IV pilus assembly protein [Neisseria gonorrhoeae PID1]
gi|268682377|ref|ZP_06149239.1| type IV pilus assembly protein [Neisseria gonorrhoeae PID332]
gi|268684535|ref|ZP_06151397.1| type IV pilus assembly protein [Neisseria gonorrhoeae SK-92-679]
gi|268686845|ref|ZP_06153707.1| type IV pilus assembly protein [Neisseria gonorrhoeae SK-93-1035]
gi|291043576|ref|ZP_06569292.1| F type IV pilus assembly protein [Neisseria gonorrhoeae DGI2]
gi|293398889|ref|ZP_06643054.1| type IV pilus biogenesis/stability protein PilW [Neisseria
gonorrhoeae F62]
gi|59717920|gb|AAW89325.1| conserved hypothetical protein [Neisseria gonorrhoeae FA 1090]
gi|226512981|gb|EEH62326.1| ftype IV pilus assembly protein [Neisseria gonorrhoeae 1291]
gi|268548389|gb|EEZ43807.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02]
gi|268550408|gb|EEZ45427.1| type IV pilus assembly protein [Neisseria gonorrhoeae FA19]
gi|268583359|gb|EEZ48035.1| type IV pilus assembly protein [Neisseria gonorrhoeae MS11]
gi|268585706|gb|EEZ50382.1| type IV pilus assembly protein [Neisseria gonorrhoeae PID18]
gi|268588045|gb|EEZ52721.1| type IV pilus assembly protein [Neisseria gonorrhoeae PID1]
gi|268622661|gb|EEZ55061.1| type IV pilus assembly protein [Neisseria gonorrhoeae PID332]
gi|268624819|gb|EEZ57219.1| type IV pilus assembly protein [Neisseria gonorrhoeae SK-92-679]
gi|268627129|gb|EEZ59529.1| type IV pilus assembly protein [Neisseria gonorrhoeae SK-93-1035]
gi|291012039|gb|EFE04028.1| F type IV pilus assembly protein [Neisseria gonorrhoeae DGI2]
gi|291610303|gb|EFF39413.1| type IV pilus biogenesis/stability protein PilW [Neisseria
gonorrhoeae F62]
Length = 253
Score = 36.3 bits (81), Expect = 4.0, Method: Composition-based stats.
Identities = 27/245 (11%), Positives = 61/245 (24%), Gaps = 14/245 (5%)
Query: 28 FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87
S+ + +G S R + V + + A+ +++ Q++ +A +
Sbjct: 9 ISLLLVLALGACSTSYRPSRAEKANQVSNIKT--QLAMEYMRGQDYRQATASIEDALKSN 66
Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI------TQYPESKNVDYVYYLVGMSY 141
P +A K Q++ +
Sbjct: 67 PKNELAWLVRAEIYQYLKVNDKAQESFRQALSIKPDSAEINNNYGWFLCGRLNRPAESMA 126
Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
+ + + + Q E+ R +
Sbjct: 127 YFDKALADPTYPTPYIANLNKGICSAKQGQFGLAEAYLKRSLAAQPQFPPAFKELARTKM 186
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV--EAYVALALMDEAREVVSLIQERYPQ 259
G+ A F+ Y +A L+ + AL + A E + +Q +P
Sbjct: 187 LAGQLGDADYYFK----KYQSRVEVLQADDLLLGWKIAKALGNVQAAYEYEAQLQANFPY 242
Query: 260 GYWAR 264
+
Sbjct: 243 SEELQ 247
>gi|22760202|dbj|BAC11102.1| unnamed protein product [Homo sapiens]
Length = 408
Score = 36.3 bits (81), Expect = 4.0, Method: Composition-based stats.
Identities = 16/226 (7%), Positives = 47/226 (20%), Gaps = 10/226 (4%)
Query: 38 WERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
++ +Y L+ ++ ++ +A + + + P +
Sbjct: 159 CSEIPDENLKDPHAHKSSVTSCLYNLGKLYHEQGHYEEALSVYKEAIQKMPRQFAPQSLY 218
Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL------VGMSYAQMIRDVPYD 151
M K +A E + + Y ++
Sbjct: 219 NMMGEAYMRLSKLPEAEHWYMESLRSKTDHIPAHLTYGKLLALTGRKSEAEKLFLKAIEL 278
Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
+ + + + + AA
Sbjct: 279 DPTKGNCYMHYGQFLLEEARLIEAAEMAKKAAELDSTEFDVVFNAAHMLRQASLNEAAEK 338
Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR-EVVSLIQER 256
+ L + A+ L + +A + +Q +
Sbjct: 339 YYDLAARLRPNYPA---ALMNLGAILHLNGRLQKAEANYLRALQLK 381
>gi|297823633|ref|XP_002879699.1| hypothetical protein ARALYDRAFT_345526 [Arabidopsis lyrata subsp.
lyrata]
gi|297325538|gb|EFH55958.1| hypothetical protein ARALYDRAFT_345526 [Arabidopsis lyrata subsp.
lyrata]
Length = 583
Score = 36.3 bits (81), Expect = 4.1, Method: Composition-based stats.
Identities = 23/207 (11%), Positives = 50/207 (24%), Gaps = 8/207 (3%)
Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
+ + + + Q++ A F + +P+A + + A
Sbjct: 318 LLQVGKAYFELQDYFNADSAFTLAHQKYPYALEGMDTYSTVLHHLKEEMRLGYLAQELIS 377
Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
PES + Y NS
Sbjct: 378 VDRLSPESW-CAVGNCYSLRKDHYTALKMFRRAIQLNERFTYAHTFCGHEYNSFRCTFLF 436
Query: 180 FYVTVGRNQLA-------AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232
++Q V + Y + E +++ A
Sbjct: 437 EKSEFAQHQFQLALQINPRSSVIMCYYGIALHESKRNNEALRMMEKAVLTDAKNPVAKYF 496
Query: 233 LVEAYVALALMDEAREVVSLIQERYPQ 259
+L +A++V+ ++E +PQ
Sbjct: 497 KANILNSLGDYHKAQKVLEELKECFPQ 523
>gi|258621417|ref|ZP_05716451.1| conserved hypothetical protein [Vibrio mimicus VM573]
gi|258586805|gb|EEW11520.1| conserved hypothetical protein [Vibrio mimicus VM573]
Length = 253
Score = 36.3 bits (81), Expect = 4.1, Method: Composition-based stats.
Identities = 11/92 (11%), Positives = 31/92 (33%)
Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
F + +A + + + + ++ D+ +A+ +L +
Sbjct: 162 FQTDYPNSTFSANSHYWLGQLYFAKKEDKEAAKSFIAVVSHQDSNKRADALVKLGDIAKR 221
Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETLVK 271
++AR+ + YP A+ + +K
Sbjct: 222 NNNAEQARKFYQQAIDEYPDSASAKVAKESLK 253
>gi|225716416|gb|ACO14054.1| Mitochondrial fission 1 protein [Esox lucius]
Length = 155
Score = 36.3 bits (81), Expect = 4.1, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 27/83 (32%)
Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
+ E K E + L N + A + + L A L ++A
Sbjct: 32 KGTKFEYAWCLIRSKYSEDIKKGIVLLEELVNKGSKDDARDFLFYLAVANYRLKEYEKAL 91
Query: 248 EVVSLIQERYPQGYWARYVETLV 270
+ + + + P A +E L+
Sbjct: 92 KYIRTLLKNEPGNKQALDLEKLI 114
>gi|224043784|ref|XP_002191051.1| PREDICTED: FK506 binding protein 4, 59kDa [Taeniopygia guttata]
Length = 591
Score = 36.3 bits (81), Expect = 4.1, Method: Composition-based stats.
Identities = 21/191 (10%), Positives = 50/191 (26%), Gaps = 5/191 (2%)
Query: 74 SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
KA + + + + + + + + ES ++
Sbjct: 340 EKAIQKMEKSEESVFYLKPSYGFGSAGNEKFKIPPDAELQYEVKLKSFEKAKESWEMNTD 399
Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
L + + + K +IV + + A
Sbjct: 400 EKLEQSCIVKERGTQYFKEGKYKRAALQYKKIVSWLEHESGLSEEEESKAKSLRLAAHLN 459
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+ + LK + + E+ + R EA++A+ + AR +
Sbjct: 460 LAMCHLKLKEYS-----QALENCNKALELDSNNEKGLFRRGEAHLAVNDFELARADFQKV 514
Query: 254 QERYPQGYWAR 264
+ YP A+
Sbjct: 515 IQLYPSNKAAK 525
>gi|224370792|ref|YP_002604956.1| TPR repeat family protein [Desulfobacterium autotrophicum HRM2]
gi|223693509|gb|ACN16792.1| TPR repeat family protein [Desulfobacterium autotrophicum HRM2]
Length = 850
Score = 36.3 bits (81), Expect = 4.1, Method: Composition-based stats.
Identities = 12/61 (19%), Positives = 22/61 (36%)
Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
+ + AA F ++ +Y D + + L Y A D+A + E P+
Sbjct: 317 HTRLKNPAAAEGFFAIIRDHYRDYPGLAQVLYHLGLIYDAKGYNDQALAYFKEVFEDLPE 376
Query: 260 G 260
Sbjct: 377 N 377
>gi|195028406|ref|XP_001987067.1| GH21711 [Drosophila grimshawi]
gi|193903067|gb|EDW01934.1| GH21711 [Drosophila grimshawi]
Length = 1053
Score = 36.3 bits (81), Expect = 4.1, Method: Composition-based stats.
Identities = 17/205 (8%), Positives = 43/205 (20%), Gaps = 9/205 (4%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
A + ++ A + + + P R L + + E
Sbjct: 151 NLAAALVAARDMEAAVQAYITALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETC 210
Query: 122 ---TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
+ + + +++ A
Sbjct: 211 PGFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAA 270
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
A + Y ++G AI ++ + + +A L A
Sbjct: 271 YLRALNLSPNNAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPNFP---DAYCNLANALK 327
Query: 239 ALALMDEARE---VVSLIQERYPQG 260
+ EA + + +
Sbjct: 328 EKGQVKEAEDCYNTALRLCSNHADS 352
>gi|168210749|ref|ZP_02636374.1| tetratricopeptide repeat protein [Clostridium perfringens B str.
ATCC 3626]
gi|170711194|gb|EDT23376.1| tetratricopeptide repeat protein [Clostridium perfringens B str.
ATCC 3626]
Length = 473
Score = 36.3 bits (81), Expect = 4.1, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 35/110 (31%), Gaps = 6/110 (5%)
Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS----- 221
++Y ++ + + +G Y + AI FQ L +Y
Sbjct: 360 KKYEDALKDFEKAYAFSSDSYLRPHLIYFMGTSYENLDKNTEAIKYFQEYLKDYKAKPDA 419
Query: 222 -DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
D + + + L Y E+++ I+ YP + V +
Sbjct: 420 EDFMYTPQCLYNLAILYNKEGNNAESKKYAQEIENDYPNTMFYNDVTKKI 469
>gi|134055728|emb|CAK44101.1| unnamed protein product [Aspergillus niger]
Length = 756
Score = 36.3 bits (81), Expect = 4.1, Method: Composition-based stats.
Identities = 22/163 (13%), Positives = 54/163 (33%), Gaps = 5/163 (3%)
Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
A + + + + LV +S+ + ++
Sbjct: 156 PYLKIMADENYGIRVDHLSDLRFLPSHDPLVPVSWGGRRGMDQTASYCKTKANDHFNK-- 213
Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
+Y + + ++ + YLK ++ AA+ + VL++ +
Sbjct: 214 GQYYLAIDWYSKALDTSPTTDEALIIRLNRALTYLKTHQFDAALYDLKTVLSDQESS--- 270
Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
E+A+ R +A LA +E+ +V ++ +P A+
Sbjct: 271 EKALFRKSQALYHLARFEESCKVHQVLFATFPNNTAAKLEFNR 313
>gi|115443024|ref|XP_001218319.1| protein bimA [Aspergillus terreus NIH2624]
gi|114188188|gb|EAU29888.1| protein bimA [Aspergillus terreus NIH2624]
Length = 808
Score = 36.3 bits (81), Expect = 4.1, Method: Composition-based stats.
Identities = 21/220 (9%), Positives = 50/220 (22%), Gaps = 3/220 (1%)
Query: 35 LVGWERQSSRDVYLDSVTDVRYQREVYEK-AVLFLKEQNFS--KAYEYFNQCSRDFPFAG 91
L G + + + + + E++ K A + + +A + FN S+
Sbjct: 456 LHGTSSRGAAIEKTKAFEALTWLLELFSKLASGYFALSRYKCVEAIQIFNALSQGQRETP 515
Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151
+ + + Q ++ E + + ++
Sbjct: 516 WVLSQIGRAYYEQAMYSDAEKYFIKVRTMAPSRLEDMEIYSTVLWHLKNDVELAYLAHEL 575
Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
+L Q I +++ A +
Sbjct: 576 MEVDRLSPQAWCAIGNSFSHQRDHDQALKCFKRATQLDPQFAYGFTLQGHEYVANEEYDK 635
Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
S A L Y + +D A +
Sbjct: 636 ALDAYRNGISADSRHYNAWYGLGTVYDKMGKLDFAEQHFR 675
>gi|77920692|ref|YP_358507.1| TPR repeat-containing protein [Pelobacter carbinolicus DSM 2380]
gi|77546775|gb|ABA90337.1| TPR repeat protein [Pelobacter carbinolicus DSM 2380]
Length = 313
Score = 36.3 bits (81), Expect = 4.1, Method: Composition-based stats.
Identities = 26/220 (11%), Positives = 54/220 (24%), Gaps = 8/220 (3%)
Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
+ + + Y + + + +A + F + L ++ +
Sbjct: 58 EPDFSQAHYYIGLALYDQGDLPRAIKAFRAALAESREPFRILFKLGLAQYGLGDLAASVA 117
Query: 113 AASLGEEYI---TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
+ + + + Y+ + D L + I +
Sbjct: 118 SFKQALQVNPASAETCYRLGLSYLRQSDLEQARAALDDAIRLNPKYTRALFILGMIYSQQ 177
Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
N V E+G L+ GE A +F+ N A
Sbjct: 178 GNPTEAIRLFRQVEQASPDYTEACFELGMALLRNGELDEAAAQFEKTTVNSPR--FTP-A 234
Query: 230 MARLVEAYVALALMDEARE-VVSLIQERYPQGY-WARYVE 267
L EA + EA +++ W E
Sbjct: 235 HFMLGEARRRAGKLSEAISAYRQALEQNPRDTEGWLHLAE 274
>gi|120554521|ref|YP_958872.1| TPR repeat-containing protein [Marinobacter aquaeolei VT8]
gi|120324370|gb|ABM18685.1| Tetratricopeptide TPR_2 repeat protein [Marinobacter aquaeolei VT8]
Length = 939
Score = 36.3 bits (81), Expect = 4.1, Method: Composition-based stats.
Identities = 13/62 (20%), Positives = 27/62 (43%)
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
++ + + G+ +I R + ++ Y ++E EA R+ EA + EA +
Sbjct: 136 YQMAKAHALTGQPEQSIARLKQLVGLYPNSELVPEARFRIAEAAFSAGRYAEAEAGYRQL 195
Query: 254 QE 255
E
Sbjct: 196 LE 197
>gi|268316993|ref|YP_003290712.1| Tetratricopeptide TPR_4 [Rhodothermus marinus DSM 4252]
gi|262334527|gb|ACY48324.1| Tetratricopeptide TPR_4 [Rhodothermus marinus DSM 4252]
Length = 285
Score = 36.3 bits (81), Expect = 4.1, Method: Composition-based stats.
Identities = 8/34 (23%), Positives = 16/34 (47%)
Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
E A+ L Y+ L +++A V + +P+
Sbjct: 82 ENALYYLGNTYLELGRLEDAYRVWQRLAAAHPRS 115
>gi|229496266|ref|ZP_04389986.1| putative TPR domain protein [Porphyromonas endodontalis ATCC 35406]
gi|229316844|gb|EEN82757.1| putative TPR domain protein [Porphyromonas endodontalis ATCC 35406]
Length = 1009
Score = 36.3 bits (81), Expect = 4.1, Method: Composition-based stats.
Identities = 12/59 (20%), Positives = 23/59 (38%)
Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
R +Y I ++ ++ D+ A +A + AY+ D A + +Y Q
Sbjct: 595 RKQYSRQIALLDRLITSFPDSPAAAQASYQKGRAYLLQGNNDAAEKAFVATASQYSQSE 653
>gi|224613494|gb|ACN60326.1| Mitochondrial fission 1 protein [Salmo salar]
Length = 153
Score = 36.3 bits (81), Expect = 4.1, Method: Composition-based stats.
Identities = 13/83 (15%), Positives = 26/83 (31%)
Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
+ E K + L N + A + + L A L ++A
Sbjct: 30 KETKFEYAWCLTRSKYSGDIKKGIVLLEDLVNKGSKDDARDFLFYLAVANYRLKDYEKAL 89
Query: 248 EVVSLIQERYPQGYWARYVETLV 270
+ + + + P A +E L+
Sbjct: 90 KYIRTLLKNEPGNKQALELEKLI 112
>gi|254460928|ref|ZP_05074344.1| hypothetical protein RB2083_1519 [Rhodobacterales bacterium
HTCC2083]
gi|206677517|gb|EDZ42004.1| hypothetical protein RB2083_1519 [Rhodobacteraceae bacterium
HTCC2083]
Length = 281
Score = 36.3 bits (81), Expect = 4.1, Method: Composition-based stats.
Identities = 14/73 (19%), Positives = 26/73 (35%)
Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
G + G+ A + + +E A +A+ RL L + EA + +
Sbjct: 201 QGEAHEASGDAREAARAYLEAYSRDPSSEIAPDALYRLGRTLGRLGKVSEACVTLGEVDV 260
Query: 256 RYPQGYWARYVET 268
R+P A +
Sbjct: 261 RHPGTLAASEAQA 273
>gi|114650352|ref|XP_001138850.1| PREDICTED: similar to p58 isoform 3 [Pan troglodytes]
Length = 421
Score = 36.3 bits (81), Expect = 4.1, Method: Composition-based stats.
Identities = 22/258 (8%), Positives = 66/258 (25%), Gaps = 20/258 (7%)
Query: 34 FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93
L ++ + + + +A+ +++ A + ++ +
Sbjct: 48 VLKSNPSENEEKEAQSQLIKSDEMQRLRSQALNAFGSGDYTAAIAFLDKILEVCVWDAEL 107
Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153
R+ + K + E+ Y + + +V +
Sbjct: 108 RELRAECFIKEGEPRKAISDLKAASKLKNDNTEAFYKISTLYYQLGDHELSLSEVRECLK 167
Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK----------- 202
+ + + + + ++ A + GR A + E
Sbjct: 168 LDQDHKRCFAHYKQVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPSIAEYTIRSKE 227
Query: 203 -----RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA-REVVSLIQER 256
+ + ++ A+ EAY+ + DEA ++ + +
Sbjct: 228 RICHCFSKDEKPVEAIRVCSEVLQMEPDNVNALKDRAEAYLIEEMYDEAIQDYETAQEHN 287
Query: 257 YPQGYWA---RYVETLVK 271
+ L+K
Sbjct: 288 ENDQQIREGLEKAQRLLK 305
>gi|312143614|ref|YP_003995060.1| Tetratricopeptide TPR_1 repeat-containing protein [Halanaerobium
sp. 'sapolanicus']
gi|311904265|gb|ADQ14706.1| Tetratricopeptide TPR_1 repeat-containing protein [Halanaerobium
sp. 'sapolanicus']
Length = 391
Score = 36.3 bits (81), Expect = 4.2, Method: Composition-based stats.
Identities = 32/244 (13%), Positives = 70/244 (28%), Gaps = 20/244 (8%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K I I + F Q +++ +A+ +QNF++A +
Sbjct: 1 MKKKFFLIVLIIILVFSSNLAAQEGAKT---------TAEDLFSQALKNYNQQNFNQAEQ 51
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
F+ ++ + S+L + +A E + ++ + +
Sbjct: 52 EFSLLLNEYELDEGFKFSVLYYLTMTAVKENRTLSAINYVE-KLEELGYQSGTLNWQIGE 110
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
+ + + D L+ S + + R A EI
Sbjct: 111 LFLNKNRQFDSADFEMALKYLKKTSELGLSSNTFKRDLAYAYRENNKRENAADIYQEIID 170
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR----------LVEAYVALALMDEARE 248
+Y+ ++ E E+A+A+ L Y L + A
Sbjct: 171 DNPIAEDYLNLAKLYEENGDLNKAVELYEQALAKGTVQQSIYLNLGNLYQRLGNYNSAIS 230
Query: 249 VVSL 252
+ L
Sbjct: 231 IYEL 234
>gi|255035984|ref|YP_003086605.1| RagB/SusD domain-containing protein [Dyadobacter fermentans DSM
18053]
gi|254948740|gb|ACT93440.1| RagB/SusD domain protein [Dyadobacter fermentans DSM 18053]
Length = 566
Score = 36.3 bits (81), Expect = 4.2, Method: Composition-based stats.
Identities = 25/229 (10%), Positives = 57/229 (24%), Gaps = 5/229 (2%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLD--SVTDVRYQREVYEKAVLFLKEQNFSKA 76
+ ++ + A+ G E +V LD S ++ Y+ AV+ L E +
Sbjct: 1 MKRYISFLLTLCALGLTTGCEESYLEEVPLDRFSPENLLVNEAGYDAAVVSLYEAARQEH 60
Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
N ++ S + + + + + + +
Sbjct: 61 SIASNNFEYMTVGTDQSQWGRNDSRGNKDYSLLNSNLEATAIYWDWAFKQMIVRANLILD 120
Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196
I D + + V + + R
Sbjct: 121 NIDDPELKIGDAARANIKGQALFFRAYTYNFLANVYGGVPVVKERIEEPRFDFVRNTRME 180
Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
++ + A+ V A L E Y++L + +
Sbjct: 181 VLEFVAQDLEAASTLLNMEVPD---GRIPRAAAFHLLSEVYISLGMEKK 226
>gi|323143609|ref|ZP_08078286.1| tol-pal system protein YbgF [Succinatimonas hippei YIT 12066]
gi|322416672|gb|EFY07329.1| tol-pal system protein YbgF [Succinatimonas hippei YIT 12066]
Length = 251
Score = 36.3 bits (81), Expect = 4.2, Method: Composition-based stats.
Identities = 11/110 (10%), Positives = 33/110 (30%)
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
+ + + + + + N L + + L +A ++
Sbjct: 140 YKFVTANNLAAAEKEFSAYLQSYPDNSLTPNAWYWLGQVQYKQNKLDEARVSFLNVARFT 199
Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+++ +L D+A++ L+ +YP A ++
Sbjct: 200 ATPKRPDSLYKLGLISKLKGDKDKAKQFFELVINKYPADTAANLSRQELQ 249
>gi|319778878|ref|YP_004129791.1| putative lipoprotein [Taylorella equigenitalis MCE9]
gi|317108902|gb|ADU91648.1| putative lipoprotein [Taylorella equigenitalis MCE9]
Length = 158
Score = 36.3 bits (81), Expect = 4.2, Method: Composition-based stats.
Identities = 12/122 (9%), Positives = 28/122 (22%), Gaps = 4/122 (3%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K + + L + ++ + E+ ++ E
Sbjct: 1 MKKNLYLLNCLLISAVLAACSSPKKEE---PKSPYSEKEQVLLEELRKKFTAGSYDAVIE 57
Query: 79 YFNQCSRDFPFA-GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
+Q +SL AF Q + K + + + P
Sbjct: 58 DVSQMPEYQAGGLPFRTQSLKFLAFSQCVSNKVRDCTKTFDTILDLDPNFNLEPAEAGHP 117
Query: 138 GM 139
Sbjct: 118 SW 119
>gi|254517944|ref|ZP_05130000.1| conserved hypothetical protein [Clostridium sp. 7_2_43FAA]
gi|226911693|gb|EEH96894.1| conserved hypothetical protein [Clostridium sp. 7_2_43FAA]
Length = 359
Score = 36.3 bits (81), Expect = 4.2, Method: Composition-based stats.
Identities = 11/72 (15%), Positives = 23/72 (31%), Gaps = 5/72 (6%)
Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVT-----DVRYQREVYEKAVLFLKEQN 72
+ K + F I L + + ++ + + E A L +
Sbjct: 4 KFIKLTIIPLFLILTSSLFSCTDTTKKVTVSNNTSEEILVEENEVDEAITNAKKLLTDNK 63
Query: 73 FSKAYEYFNQCS 84
+ +A YFN+
Sbjct: 64 YDEAKAYFNKAI 75
>gi|260642593|ref|ZP_05416515.2| putative outer membrane protein [Bacteroides finegoldii DSM 17565]
gi|260621402|gb|EEX44273.1| putative outer membrane protein [Bacteroides finegoldii DSM 17565]
Length = 607
Score = 36.3 bits (81), Expect = 4.2, Method: Composition-based stats.
Identities = 24/217 (11%), Positives = 54/217 (24%), Gaps = 4/217 (1%)
Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
+ K +F A + R+ ++ AV + A
Sbjct: 1 MMMKKLYILFAVGASVMMSACSDFLDREPMTTPNSETFLSNA---SAVNNYINGLYI-AL 56
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
F +++ + + G+ + E+ Y +NV+Y +
Sbjct: 57 PSFGTYDMGVRGEEKNSDNIVAEVYDKRLNGELLETGGGTAEWQNGYQNLRNVNYFFEYY 116
Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
+ A+ +DV + Y + S V + L +
Sbjct: 117 KVPEAEETKDVLSLKGEAYFFRAYWHFYLLTRFGSIPVMDKFWDGNATVAGLQIPPRDRS 176
Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234
+ + + Y +EA +
Sbjct: 177 AVAQFIIDDLKTAKNLLYSRSQYKGLRICKEAAIIMA 213
>gi|217076661|ref|YP_002334377.1| tetratricopeptide repeat domain protein [Thermosipho africanus
TCF52B]
gi|217036514|gb|ACJ75036.1| tetratricopeptide repeat domain protein [Thermosipho africanus
TCF52B]
Length = 491
Score = 36.3 bits (81), Expect = 4.2, Method: Composition-based stats.
Identities = 30/209 (14%), Positives = 61/209 (29%), Gaps = 9/209 (4%)
Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
YEK L EQ + +A + + L+ A + +
Sbjct: 39 YYEKFKKLLNEQKYEEARKILEKAKNVLYDYRYHFYYGLLFAKLGDYDNAEIELKQAVSL 98
Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
Y + V YL + + + + L + Y + +
Sbjct: 99 NPNFYIGYYELGNVLYLKKDYDEAIEIYMKAFELNKEFSLPLL------KIGDTYFENGQ 152
Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA---EHAEEAMARLVEA 236
F + A K ++ + YL+ G + +F+ + D E+ E L
Sbjct: 153 FKDAEIAYKSALKIEKLPQVYLRLGVLYNELQKFEKAEKIFRDGLSVEYKPEIAYNLSYT 212
Query: 237 YVALALMDEAREVVSLIQERYPQGYWARY 265
+ L +A +++ + YP
Sbjct: 213 LIRLGKHFQALQILKELANNYPTPEVYNE 241
>gi|183221520|ref|YP_001839516.1| TPR repeat-containing protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189911604|ref|YP_001963159.1| hypothetical protein LBF_2084 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167776280|gb|ABZ94581.1| Conserved hypothetical protein containing tetratricopeptide repeat
(TPR) domains [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|167779942|gb|ABZ98240.1| Putative TPR-repeat-containing protein [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Paris)']
Length = 700
Score = 36.3 bits (81), Expect = 4.2, Method: Composition-based stats.
Identities = 28/207 (13%), Positives = 51/207 (24%), Gaps = 31/207 (14%)
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
Y A+ +LK+ N ++A F + + P + A S + Y Y +A E
Sbjct: 253 YNLAISYLKQGNLAEAISEFQKVVQTAPNSQTAVLSYGHLGTIFYQREDYDRAEYYFREV 312
Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
I + + +
Sbjct: 313 IRLKTGDA----------------------------KAYYNLGLVYLKKKVPEEAAKYFQ 344
Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
I +L G+ AI + L +++ L E Y
Sbjct: 345 KALDANANEPEVYRYIADAFLSMGQTNMAITALKKALLLKPSDV---DSLFALAELYYKK 401
Query: 241 ALMDEAREVVSLIQERYPQGYWARYVE 267
+ EA + I P ++
Sbjct: 402 GELVEAESLFRRIIRLTPGDTYSETAY 428
>gi|88602287|ref|YP_502465.1| TPR repeat-containing protein [Methanospirillum hungatei JF-1]
gi|88187749|gb|ABD40746.1| TPR repeat [Methanospirillum hungatei JF-1]
Length = 634
Score = 36.3 bits (81), Expect = 4.2, Method: Composition-based stats.
Identities = 22/207 (10%), Positives = 52/207 (25%), Gaps = 9/207 (4%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
+ Y++ + L+ +N+ +A F + + P A L S +
Sbjct: 24 AEENATGSGWYDQGLTALENENYEEAISNFLKAVEEDPQNEQAYSKLGGSYLMTGDVESA 83
Query: 111 QQAASLGEEYI------TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
A + + + + + +
Sbjct: 84 IYAFQNVTNLNPENGVAWGNIGYLYLVGKEKPDPVPALEALTKAVEVKTDDPGIWTNYGI 143
Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
T+S + + G G+ A+ ++ + + +
Sbjct: 144 AQLLNTDSESALESFNKAIELMPDGSRAYYWKGITLSDLGQPEEALTAYEKAIELNPEFK 203
Query: 225 HAEEAMARLVEAYVALALMDEAREVVS 251
+A+ A AL DEA +
Sbjct: 204 ---DALYAKGIAESALGKFDEAEATFN 227
>gi|118401580|ref|XP_001033110.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89287457|gb|EAR85447.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 3068
Score = 36.3 bits (81), Expect = 4.2, Method: Composition-based stats.
Identities = 17/223 (7%), Positives = 52/223 (23%), Gaps = 7/223 (3%)
Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL---LMS 100
++ + ++ A + + ++ A +Y+ S+ +L
Sbjct: 184 EELKKSLELEPNNVLTLFNIATCYYELSDYKNAIKYYEMLSKQNFQDARVYFNLALSYEK 243
Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
Y+A + + + + ++ Q + +
Sbjct: 244 INDTYNAQVNYDKTLKLNSSFSGAVVNYSNLLIRIGELEQSRLLLESHLKYQPRDEKAIN 303
Query: 161 YMSRIVERYTNSPY----VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
++ I+ K + + K + A +F +
Sbjct: 304 NLNIILAEKRQDKQADILFKKILRKQNGFTPSILYNHGVLLFKQNKLISALQAFQQFTQI 363
Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
+ + L + + V I E +
Sbjct: 364 PEVEERDPLNLLSYVNQGLIFEKLGQYESSLTVYETILENFSD 406
Score = 35.2 bits (78), Expect = 9.3, Method: Composition-based stats.
Identities = 26/208 (12%), Positives = 52/208 (25%), Gaps = 4/208 (1%)
Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
A + +N+ A E + ++ + E +
Sbjct: 2792 ANCYYFTENYDTAIEKYENLLKNKQDDEALQYLADCYYTKDDVENAIYYYKQCLEINPKR 2851
Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
N+ Y + Q T Y + Y + Y + A
Sbjct: 2852 PNCLYNLGNAYCTQNNYEEAQQAYIECIQLDTTNASAYYNLANVYYIQNDY-ENALINFE 2910
Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243
+ + + + Q +L Y D + +L +AY +
Sbjct: 2911 LAIEKDPSNVEWRNYIAGLYIDNNQFDKAIQHLLKAYDDGTSNFDTCFKLAQAYYGQQNL 2970
Query: 244 DEAREVVSLIQERYPQGYWARYVETLVK 271
EAR+ + + E P L +
Sbjct: 2971 SEARQYIKVAVEIDPDND---DAYRLYE 2995
>gi|37521795|ref|NP_925172.1| hypothetical protein gll2226 [Gloeobacter violaceus PCC 7421]
gi|35212793|dbj|BAC90167.1| gll2226 [Gloeobacter violaceus PCC 7421]
Length = 1009
Score = 36.3 bits (81), Expect = 4.2, Method: Composition-based stats.
Identities = 17/199 (8%), Positives = 45/199 (22%), Gaps = 6/199 (3%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF--AGVARKSLLMSAFVQYSAG 108
+ + A+L++ + + +A + + + +
Sbjct: 221 PEHPEVAKTLNNLALLYVDQGRYREAEPLYERALAIHQKVLGPDHPQVAKTLNNLAILQT 280
Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVER 168
K + Y + V + + + DQ + R +
Sbjct: 281 KQGRYREAEPLYERALAIHQKVLGPDHPDVAVKLNNLAFLYVDQGRYREAEPLYERALAI 340
Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
+ N + + A + + + + D
Sbjct: 341 HQKVL-GPDHPQVAANLNNLALLHVAQGKYLEAEPLLKHALVIHHKTLGPEHPDEAQV-- 397
Query: 229 AMARLVEAYVALALMDEAR 247
+ L Y +L EA
Sbjct: 398 -LHSLAVLYTSLGRYREAE 415
>gi|46201288|ref|ZP_00208041.1| COG1729: Uncharacterized protein conserved in bacteria
[Magnetospirillum magnetotacticum MS-1]
Length = 110
Score = 36.3 bits (81), Expect = 4.2, Method: Composition-based stats.
Identities = 10/80 (12%), Positives = 28/80 (35%)
Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
+ A+ + ++ ++ + F Y A + + +L ++
Sbjct: 11 KTYPNHQLAGNAQYWLGDIAFSQKKDFATSAKLFGEAYKKYPKHTKAPDMLYKLGASFGQ 70
Query: 240 LALMDEAREVVSLIQERYPQ 259
L + D+A +L+ +P
Sbjct: 71 LDMKDQACRTYALLFAEHPD 90
>gi|298712803|emb|CBJ48768.1| Heat shock protein 40 like protein [Ectocarpus siliculosus]
Length = 537
Score = 36.3 bits (81), Expect = 4.2, Method: Composition-based stats.
Identities = 21/208 (10%), Positives = 59/208 (28%), Gaps = 11/208 (5%)
Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
+ + +R Y++ +FL ++ +++A + ++ +++L A + G ++
Sbjct: 88 EPKNERNFYKRFRVFLSKRKYAEAIQDLSRALELK---PKYKQALAQRAKLLRMMGHCEE 144
Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
AA P+ +++ +Y L ++ + + +
Sbjct: 145 AAKDYAALEVIDPKHADLETLYPLAITCAQRLAEGGAAEAQKNWEAAAEAYDAILDEQLD 204
Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232
+L+ + + A EA+
Sbjct: 205 LVGAELLIRRARC--------HFALGRWLQAAADAGRAAKVAAEADDDKAARERAEALEL 256
Query: 233 LVEAYVALALMDEAREVVSLIQERYPQG 260
Y+ L + A + P
Sbjct: 257 RGRCYIQLGDYELAGNHFRQVLLDDPDN 284
>gi|121635021|ref|YP_975266.1| putative lipoprotein [Neisseria meningitidis FAM18]
gi|120866727|emb|CAM10480.1| putative lipoprotein [Neisseria meningitidis FAM18]
Length = 265
Score = 36.3 bits (81), Expect = 4.2, Method: Composition-based stats.
Identities = 27/245 (11%), Positives = 60/245 (24%), Gaps = 14/245 (5%)
Query: 28 FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87
S+ + +G S R + V + + A+ +++ Q++ +A +
Sbjct: 21 ISLLLVLALGACSTSYRPSRAEKANQVSNIKT--QLAMEYMRGQDYRQATASIEDALKSD 78
Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI------TQYPESKNVDYVYYLVGMSY 141
P +A K Q++ +
Sbjct: 79 PKNELAWLVRAEIYQYLKVNDKAQESFRQALSIKPDSAEINNNYGWFLCGRLNRPAESMA 138
Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
+ + + + Q E+ R +
Sbjct: 139 YFDKALADPTYPTPYIANLNKGICSAKQGQFGLAEAYLKRSLAAQPQFPPAFKELARTKM 198
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV--EAYVALALMDEAREVVSLIQERYPQ 259
G+ A F+ Y +A L+ + AL A E + +Q +P
Sbjct: 199 LAGQLGDADYYFK----KYQSRVEVLQADDLLLGWKIAKALGNAQAAYEYEAQLQANFPY 254
Query: 260 GYWAR 264
+
Sbjct: 255 SEELQ 259
>gi|157368400|ref|YP_001476389.1| cellulose synthase subunit BcsC [Serratia proteamaculans 568]
gi|157320164|gb|ABV39261.1| cellulose synthase operon C domain protein [Serratia proteamaculans
568]
Length = 1157
Score = 36.3 bits (81), Expect = 4.2, Method: Composition-based stats.
Identities = 23/197 (11%), Positives = 61/197 (30%), Gaps = 6/197 (3%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
++A +++ + +A E + + + P + + S +
Sbjct: 469 QQAEQLAQQKQWHQAAEKYRRAQQMDPDDVWLTYHYAQTLRQAGQPEQADALFSRLAQKQ 528
Query: 122 TQYPESKNVDYVY-YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
P+ +Y + + ++ +++ ++ + + R
Sbjct: 529 RGNPQLTYAYALYLSGSDRDQQALAQLNTLPSAQWNDNMRELAQRLKMQATLEHAERLRA 588
Query: 181 YVTVGRNQLAAKEVEI-GRYYLKRGEYVAAIPRFQLVLANYSDA----EHAEEAMARLVE 235
R L+ ++ A + LA+Y + +A +E
Sbjct: 589 AGDEPGAVAYLHRQPADTRIDLQLADWALARGDYDAALADYQRVRVREPNNPDARLGEIE 648
Query: 236 AYVALALMDEAREVVSL 252
AYVA ++EAR+ +
Sbjct: 649 AYVAQGKLNEARQRLQT 665
>gi|74004801|ref|XP_850862.1| PREDICTED: similar to tetratricopeptide repeat domain 21B [Canis
familiaris]
Length = 1358
Score = 36.3 bits (81), Expect = 4.2, Method: Composition-based stats.
Identities = 17/176 (9%), Positives = 53/176 (30%), Gaps = 3/176 (1%)
Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
A + ++++ KA +++ + L Q + +L +
Sbjct: 933 AKHSVAQRDYEKAIKFYREALVHCDTDNKIMLELARLYLAQEDPDACLRQCALLLQSDQD 992
Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
+ + Y Q + + +SR+++ ++ + +
Sbjct: 993 NEAATMMMADLMFRKQDYEQAVFHLQQLLERKPDNYMTLSRLIDFLRRCGKLEDVPRFFS 1052
Query: 184 VGRNQLAAKEVEIGRYYLKRGEYV---AAIPRFQLVLANYSDAEHAEEAMARLVEA 236
+ + + ++E G Y K + D++ + A+ ++E
Sbjct: 1053 MAEKRNSRAKLEPGFQYCKGLYLWYTGEPNDALRHFNKARKDSDWGQNALYNMIEI 1108
>gi|319762345|ref|YP_004126282.1| tol-pal system protein ybgf [Alicycliphilus denitrificans BC]
gi|330825734|ref|YP_004389037.1| tol-pal system protein YbgF [Alicycliphilus denitrificans K601]
gi|317116906|gb|ADU99394.1| tol-pal system protein YbgF [Alicycliphilus denitrificans BC]
gi|329311106|gb|AEB85521.1| tol-pal system protein YbgF [Alicycliphilus denitrificans K601]
Length = 262
Score = 36.3 bits (81), Expect = 4.3, Method: Composition-based stats.
Identities = 26/114 (22%), Positives = 39/114 (34%), Gaps = 14/114 (12%)
Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
V +Y S YV ARF++ G +Y AI F+ +
Sbjct: 159 EAATAFGNFVRQYPQSGYVPSARFWL--------------GNAQYATRDYKEAIANFKGL 204
Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
LA D A EA + + L AR+ + + YPQ A + +
Sbjct: 205 LAAAPDHARAPEAALSIANCQIELKDTRAARKTLEDLLRAYPQSEAAAAAKERL 258
>gi|260818136|ref|XP_002603940.1| hypothetical protein BRAFLDRAFT_102379 [Branchiostoma floridae]
gi|229289265|gb|EEN59951.1| hypothetical protein BRAFLDRAFT_102379 [Branchiostoma floridae]
Length = 1443
Score = 36.3 bits (81), Expect = 4.3, Method: Composition-based stats.
Identities = 24/215 (11%), Positives = 64/215 (29%), Gaps = 8/215 (3%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
T + + + ++ KA + Q + + A + G
Sbjct: 1113 DTTHSDFATALTNTGSVLSALGDYRKAISCYEQALQMRRSIYGQETAHPDIAMSLNNLGV 1172
Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
S IT + E+ + Y ++ I + + L + ++ Y
Sbjct: 1173 AFHKLSDHRRAITYHEEALQMRRSIYGETTAH-PDIAQSLNNVGSALEKLGDYVKAIDYY 1231
Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN----YSDAEH 225
+ + + + +A + +G + + +I F+ L Y +
Sbjct: 1232 EQALQMYRSVYGENTPHPDIANELNNLGTAWHNLTDETKSIRYFEEALQMYRAIYDQSIA 1291
Query: 226 AEE---AMARLVEAYVALALMDEAREVVSLIQERY 257
+ + L A+ ++ +++A + Y
Sbjct: 1292 RPDIAATLYNLGSAWDSMGQLEKASSYYEEALQMY 1326
>gi|154336305|ref|XP_001564388.1| hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904]
gi|134061423|emb|CAM38448.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 700
Score = 36.3 bits (81), Expect = 4.3, Method: Composition-based stats.
Identities = 8/66 (12%), Positives = 15/66 (22%)
Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90
C Q V + Y+K ++E +++ A Q
Sbjct: 521 FFCSCQSCRNQVDEPVLTAEKEKYIQASDYYQKGRRLVREGDYATAVTVLLQSYEIVMRY 580
Query: 91 GVARKS 96
Sbjct: 581 ICPPPH 586
>gi|119947005|ref|YP_944685.1| glucosamine-6-phosphate isomerase [Psychromonas ingrahamii 37]
gi|119865609|gb|ABM05086.1| predicted glucosamine-6-phosphate isomerase [Psychromonas
ingrahamii 37]
Length = 265
Score = 36.3 bits (81), Expect = 4.3, Method: Composition-based stats.
Identities = 19/140 (13%), Positives = 37/140 (26%), Gaps = 7/140 (5%)
Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS 84
T + L G S V V +K ++ L E NF++A +
Sbjct: 8 TFVLITLLLALFGCNNDSDSSVIRSEEAQVNV-----DKGIIALNEGNFNEALALLGKAE 62
Query: 85 RDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM 144
+ + LL AG ++ + ++ ++G+
Sbjct: 63 ALS--SSDSETQLLRGKAYAGRAGVSVKSITQSLTANRTDGTTELAPSSSNIMGIMNYYD 120
Query: 145 IRDVPYDQRATKLMLQYMSR 164
+ T L
Sbjct: 121 ENEFKIRTTDTNKALALFVE 140
>gi|77464238|ref|YP_353742.1| hypothetical protein RSP_0667 [Rhodobacter sphaeroides 2.4.1]
gi|126463080|ref|YP_001044194.1| hypothetical protein Rsph17029_2320 [Rhodobacter sphaeroides ATCC
17029]
gi|77388656|gb|ABA79841.1| conserved hypothetical protein [Rhodobacter sphaeroides 2.4.1]
gi|126104744|gb|ABN77422.1| conserved hypothetical protein [Rhodobacter sphaeroides ATCC 17029]
Length = 274
Score = 36.3 bits (81), Expect = 4.3, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 28/79 (35%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
G + GE A + + D A EA+ +L A L EA ++
Sbjct: 191 HYLRGEALSRLGETANAARAYLESFSGDPDGPRAPEALLKLGRALGDLRQTPEACVTLAE 250
Query: 253 IQERYPQGYWARYVETLVK 271
+ R+P A T ++
Sbjct: 251 VGTRFPGSPSAAEAATTMQ 269
>gi|268317351|ref|YP_003291070.1| hypothetical protein Rmar_1798 [Rhodothermus marinus DSM 4252]
gi|262334885|gb|ACY48682.1| Tetratricopeptide domain protein [Rhodothermus marinus DSM 4252]
Length = 235
Score = 36.3 bits (81), Expect = 4.3, Method: Composition-based stats.
Identities = 17/68 (25%), Positives = 29/68 (42%)
Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
Y +GE+ A ++ Y + + + R Y A ++ AR + I+ERYP+
Sbjct: 154 YENKGEHERAAELYRRAADRYDNPVVTPQYLLRAGRNYEAAGNLEAARRMYEAIRERYPE 213
Query: 260 GYWARYVE 267
A E
Sbjct: 214 SAQATEAE 221
>gi|325983627|ref|YP_004296029.1| hypothetical protein NAL212_3105 [Nitrosomonas sp. AL212]
gi|325533146|gb|ADZ27867.1| hypothetical protein NAL212_3105 [Nitrosomonas sp. AL212]
Length = 578
Score = 36.3 bits (81), Expect = 4.3, Method: Composition-based stats.
Identities = 24/237 (10%), Positives = 66/237 (27%), Gaps = 9/237 (3%)
Query: 39 ERQSSRDVYLDSVTDVRYQREVYE--KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
+ + +++ L+ N A + + ++ +A+++
Sbjct: 32 SNEQEDASQANLPKQELTAPILFDFLIGETALQRGNLDVAVNRYVKLAKTTRDPRIAKRA 91
Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
+S + Q A + + + + +G +
Sbjct: 92 TEISLHAGNTFAAEQAATMWIQLEPDSVDARQTIAALLVNLGKLDTAQPHLEKLLATEKE 151
Query: 157 ---LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213
+++++ R + ++ +L I + ++ A
Sbjct: 152 GLGNAFMQLNQLLSRNPDKAATLQLIQQLSQPYKELPEVHFAISQAAWFANQHQLASDEM 211
Query: 214 QLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
Q LA D E A +++ D + +++ YP+ R T V
Sbjct: 212 QRALALRPD---WEIAAIHNGRILQRISIDDASEFYRDYLKK-YPESNEVRIAYTRV 264
>gi|54309709|ref|YP_130729.1| hypothetical protein PBPRA2548 [Photobacterium profundum SS9]
gi|46914147|emb|CAG20927.1| conserved hypothetical protein [Photobacterium profundum SS9]
Length = 249
Score = 36.3 bits (81), Expect = 4.3, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 32/86 (37%), Gaps = 1/86 (1%)
Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
A +G+ Y + + A F+ V ++ + +A+ +L ++
Sbjct: 161 STYKANAHYWLGQLYFTQNKLAEASKEFKAVTSD-EKSNKRSDALLKLGVIAERSKDVEL 219
Query: 246 AREVVSLIQERYPQGYWARYVETLVK 271
A++ + YP +R E +K
Sbjct: 220 AKKYYQEVISTYPSSTSSRQAEGSLK 245
>gi|125973898|ref|YP_001037808.1| tetratricopeptide TPR_2 [Clostridium thermocellum ATCC 27405]
gi|256005019|ref|ZP_05429990.1| Tetratricopeptide TPR_2 repeat protein [Clostridium thermocellum
DSM 2360]
gi|281418061|ref|ZP_06249081.1| Tetratricopeptide TPR_2 repeat protein [Clostridium thermocellum
JW20]
gi|125714123|gb|ABN52615.1| Tetratricopeptide TPR_2 [Clostridium thermocellum ATCC 27405]
gi|255990987|gb|EEU01098.1| Tetratricopeptide TPR_2 repeat protein [Clostridium thermocellum
DSM 2360]
gi|281409463|gb|EFB39721.1| Tetratricopeptide TPR_2 repeat protein [Clostridium thermocellum
JW20]
gi|316939899|gb|ADU73933.1| Tetratricopeptide TPR_1 repeat-containing protein [Clostridium
thermocellum DSM 1313]
Length = 385
Score = 36.3 bits (81), Expect = 4.3, Method: Composition-based stats.
Identities = 23/153 (15%), Positives = 46/153 (30%)
Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
E+Y + V + + + Q + + + +
Sbjct: 225 EKYQGLNDTFEEVKKQVDYYLNASKLLQIEKYASQNQYREAADLLLLLKNTAFTGVEKEK 284
Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
+ A +E GR R Y A+ RF+ + + +A + L Y
Sbjct: 285 FDKLSQDVMPKAAQEEYNKGRELYNRKNYQEAVERFERSRSYSDNWRYAVNNLYYLGVCY 344
Query: 238 VALALMDEAREVVSLIQERYPQGYWARYVETLV 270
L +A E+ + +YP +A Y +
Sbjct: 345 QELNNTTKALEIFEEVVNKYPNTSYAGYSRERI 377
>gi|296505422|ref|YP_003667122.1| ABC transporter substrate-binding protein [Bacillus thuringiensis
BMB171]
gi|296326474|gb|ADH09402.1| ABC transporter substrate-binding protein [Bacillus thuringiensis
BMB171]
Length = 227
Score = 36.3 bits (81), Expect = 4.3, Method: Composition-based stats.
Identities = 11/70 (15%), Positives = 21/70 (30%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K LT S ++ L + + L + EKA L+++ +
Sbjct: 1 MKKLLLTALISTSIFGLAACGGKDKDEKKLVVGASNVPHAVILEKAKPLLEKKGIELEIK 60
Query: 79 YFNQCSRDFP 88
F
Sbjct: 61 KFQDYVLPNK 70
>gi|294501355|ref|YP_003565055.1| tetratricopeptide repeat protein [Bacillus megaterium QM B1551]
gi|294351292|gb|ADE71621.1| tetratricopeptide repeat protein [Bacillus megaterium QM B1551]
Length = 219
Score = 36.3 bits (81), Expect = 4.3, Method: Composition-based stats.
Identities = 23/212 (10%), Positives = 54/212 (25%), Gaps = 6/212 (2%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
+ + +++E F +A + F++ D P + + + + E
Sbjct: 6 QLGIQYMQEGKFEEAAKTFSEAIEDNPKDPIVYVNFGNLLAAVSEMDRALKFYERAIELD 65
Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVP---YDQRATKLMLQYMSRIVERYTNSPYVKGA 178
+ + Y Q + + + +
Sbjct: 66 EETATAYYGAGNIYFNAEQLEQAKHYFDLAIKKGLDSSDAYFMLGLTLFHMEEIRFAMPY 125
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
+ + G + AI F V+ + +A L AY
Sbjct: 126 LQRAVELNEHDVEAKFQYGLCLAQLEMVDEAIAEFLKVVNQEPE---HADAFYNLGVAYA 182
Query: 239 ALALMDEAREVVSLIQERYPQGYWARYVETLV 270
D+A E++ P A + ++
Sbjct: 183 MKDDKDKAIEMLDEALNVQPDHVMAVNAKQVL 214
>gi|224369177|ref|YP_002603341.1| tetratricopeptide (TPR) domain protein [Desulfobacterium
autotrophicum HRM2]
gi|223691894|gb|ACN15177.1| tetratricopeptide (TPR) domain protein [Desulfobacterium
autotrophicum HRM2]
Length = 760
Score = 36.3 bits (81), Expect = 4.3, Method: Composition-based stats.
Identities = 29/242 (11%), Positives = 72/242 (29%), Gaps = 19/242 (7%)
Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN 81
F L I + G S + + + +E + KA +
Sbjct: 6 FKLGIMVFLIFFVFSGCTSDSQKIENYL------------SEGNAYFQEGEYGKAKIQYL 53
Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY---LVG 138
+ P + A + L + + + EE + E+K
Sbjct: 54 NAIQLDPKSVKAHRLLGKAVSRIGDPKEIFRTYLRLEEVDPENIEAKLRLASITLLAGQV 113
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT-VGRNQLAAKEVEIG 197
+ + V L + I+ R + ++ + +
Sbjct: 114 TETQKRVDFVLETDTDNIEALYLQAGILARQNKGIEHTKLLYEKILDIDSRQIPALLVLS 173
Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
+ Y+ ++ AA + + D ++++ L YV ++ A ++ +I+++
Sbjct: 174 KIYIAEKKWDAAQKALKTAIDFDPDNMALQKSLYLL---YVDKNDLESAEGMLKIIRDKN 230
Query: 258 PQ 259
P+
Sbjct: 231 PE 232
>gi|254424837|ref|ZP_05038555.1| tetratricopeptide repeat domain protein [Synechococcus sp. PCC
7335]
gi|196192326|gb|EDX87290.1| tetratricopeptide repeat domain protein [Synechococcus sp. PCC
7335]
Length = 981
Score = 36.3 bits (81), Expect = 4.3, Method: Composition-based stats.
Identities = 20/198 (10%), Positives = 56/198 (28%), Gaps = 7/198 (3%)
Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
++++ + + + +++ Q + + G + + S +
Sbjct: 57 ESEAERLFQQGEADYQIGAYQDSRQHWTQAAAIYYEVGNYARLATTFNRIAASLQASEHY 116
Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
E Y + +++VD + V Q +S + R +
Sbjct: 117 PMALEYYQQGFVTAQHVDDLQESVTALDGVGTIHTLQHQYEEAQDALELSLAISRSLGAQ 176
Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
++ + + Y + + V +I S++ +A+ L
Sbjct: 177 EMEAQTLLILGSVYSDRGHYDQAIELYQQSLDIVQSIGEV-------SESSVEPQALTLL 229
Query: 234 VEAYVALALMDEAREVVS 251
A+ D+A
Sbjct: 230 GAAFGDKGDYDKAMSYYE 247
>gi|146281535|ref|YP_001171688.1| putative lipoprotein [Pseudomonas stutzeri A1501]
gi|145569740|gb|ABP78846.1| lipoprotein, putative [Pseudomonas stutzeri A1501]
gi|327479712|gb|AEA83022.1| putative lipoprotein [Pseudomonas stutzeri DSM 4166]
Length = 125
Score = 36.3 bits (81), Expect = 4.3, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 25/86 (29%)
Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
R+ E R+Y Q + ++ E + L +
Sbjct: 19 RHASDRHLDEAYRHYEADNCERVMQSLSQAERRSKPRSQAQPEISLLRGQCLERQGLFVD 78
Query: 246 AREVVSLIQERYPQGYWARYVETLVK 271
A E I ER+P +A ++
Sbjct: 79 AAETYRFIIERFPASEYAYRARARLE 104
>gi|121730331|ref|ZP_01682694.1| hypothetical protein VCV52_0672 [Vibrio cholerae V52]
gi|121627913|gb|EAX60489.1| hypothetical protein VCV52_0672 [Vibrio cholerae V52]
Length = 102
Score = 36.3 bits (81), Expect = 4.3, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 24/92 (26%), Gaps = 7/92 (7%)
Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
G V ++Y +A L+ + A E +PF + +
Sbjct: 16 FGCSSSPD-------VVPDVPPSQLYSEAQTALQSGTWLTAIEKLEALDSRYPFGAYSEQ 68
Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127
L + Y + E + P
Sbjct: 69 VQLDLIYAYYKNDDLALGLATIERFTRLNPTH 100
>gi|170728805|ref|YP_001762831.1| transcriptional regulator CadC [Shewanella woodyi ATCC 51908]
gi|169814152|gb|ACA88736.1| transcriptional regulator, CadC [Shewanella woodyi ATCC 51908]
Length = 520
Score = 36.3 bits (81), Expect = 4.3, Method: Composition-based stats.
Identities = 29/252 (11%), Positives = 60/252 (23%), Gaps = 17/252 (6%)
Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLF---LKEQNFSKAYE 78
F + I IA+ + L + + E+YE + + +E++ A E
Sbjct: 131 FVVIILACIALLYSSSRTIPQPVSQTLAAKIASGFDNELYENGLDYYHRYREEDNKLAIE 190
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY-----------PES 127
FN P A L + +S
Sbjct: 191 LFNSAIEINPNMARAYAGLSDAYSQGIFQFNGPSDWQQLAIDAAYKAIALDPNLAQGYKS 250
Query: 128 KNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
+ Y ++ + + I
Sbjct: 251 LGLAYYNRGWLTKAISANLKAVQKRKNYNEAMSNLGFIYREMGQLKQALHWIDKALEADP 310
Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
+ + + +Y A + L D+ A ++ + L +A+
Sbjct: 311 SNSVSMLHKAQILFALAQYPQANIWLEKALQLQPDSLL---ANNTQGQSLLQQGLFLQAK 367
Query: 248 EVVSLIQERYPQ 259
+ RYP+
Sbjct: 368 AHYQELIARYPK 379
>gi|332187373|ref|ZP_08389111.1| tetratricopeptide repeat family protein [Sphingomonas sp. S17]
gi|332012534|gb|EGI54601.1| tetratricopeptide repeat family protein [Sphingomonas sp. S17]
Length = 316
Score = 36.3 bits (81), Expect = 4.4, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 25/77 (32%)
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
A G Y A + + V+A+Y + A A L +Y+ A
Sbjct: 190 AEDAYLYGYRLWTAKRYAEAETQLKKVVADYPKSRRASFAQNLLGRSYLDSGKPSLASMA 249
Query: 250 VSLIQERYPQGYWARYV 266
+++P G A
Sbjct: 250 FYENYKKFPDGERAPDS 266
>gi|331004879|ref|ZP_08328296.1| MSHA biogenesis protein MshL [gamma proteobacterium IMCC1989]
gi|330421333|gb|EGG95582.1| MSHA biogenesis protein MshL [gamma proteobacterium IMCC1989]
Length = 553
Score = 36.3 bits (81), Expect = 4.4, Method: Composition-based stats.
Identities = 8/44 (18%), Positives = 19/44 (43%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEK 63
K + S A+ L + + V +D V ++ + + Y++
Sbjct: 1 MKNRKILAISFAIAVLSACASEKVKPVVVDEVDRLKKEIDAYQQ 44
>gi|294643404|ref|ZP_06721223.1| putative lipoprotein [Bacteroides ovatus SD CC 2a]
gi|292641282|gb|EFF59481.1| putative lipoprotein [Bacteroides ovatus SD CC 2a]
Length = 363
Score = 36.3 bits (81), Expect = 4.4, Method: Composition-based stats.
Identities = 22/216 (10%), Positives = 56/216 (25%), Gaps = 4/216 (1%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K + ++A L + + ++ + AV + A
Sbjct: 1 MMKKIYLLAVALAGTLLTSCSDFLDKVPLVVPSSETFLTN---QSAVTNYVNGLYI-ALP 56
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+++ + + G+ Q++ E+ Y ++V+Y
Sbjct: 57 SAGAYGMGIMGEEKNSDNMVAMVYDRRMNGELQESIGGVTEWQKGYQNLRSVNYFLEYYK 116
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
+ A+ +V + Y + S V + L +
Sbjct: 117 VPAAEETAEVLSLKGEAYFFRAYWHYYLLTKFGSIPVMDKFWDGNATVGGLQIPARDRSA 176
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234
+ + A + Y +EA +
Sbjct: 177 VAQFILDDLKAAKELLYSRSKYQGLRICKEAAMVMA 212
>gi|222636087|gb|EEE66219.1| hypothetical protein OsJ_22367 [Oryza sativa Japonica Group]
Length = 511
Score = 36.3 bits (81), Expect = 4.4, Method: Composition-based stats.
Identities = 19/189 (10%), Positives = 48/189 (25%), Gaps = 14/189 (7%)
Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
A L+ + +A + + + F + + + + +
Sbjct: 258 ASAHLELKMHEEALKRYERLMGVFRCSDYIQAQIATVQYSMRDLDEADMIFEELLRT--- 314
Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
+ + M + + +I E Y +
Sbjct: 315 --------DPFRVDSMDVYSNLLRAVDINPRDYRAWYGLGQIYEMMGMPFYAVYYFRKSS 366
Query: 184 VGRNQLAAKEVEIGRYYLKRG-EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALAL 242
+ A + + Y + + + AN +D E A+ +L + + L
Sbjct: 367 YLQPNDARLWNAMAQCYESDQLQMIEEAIKCYERSANNNDTEGI--ALHQLAKLHGMLGQ 424
Query: 243 MDEAREVVS 251
+EA
Sbjct: 425 SEEAAFYYK 433
Score = 35.9 bits (80), Expect = 6.7, Method: Composition-based stats.
Identities = 17/152 (11%), Positives = 40/152 (26%)
Query: 108 GKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE 167
Y S E + S ++ + + + + + L+ R++
Sbjct: 220 NSYPWNWSAWLELQSLCTSSDILNNLNLKNHWMKDFFLASAHLELKMHEEALKRYERLMG 279
Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
+ S Y++ V L ++ V ++ + +L
Sbjct: 280 VFRCSDYIQAQIATVQYSMRDLDEADMIFEELLRTDPFRVDSMDVYSNLLRAVDINPRDY 339
Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
A L + Y + + A P
Sbjct: 340 RAWYGLGQIYEMMGMPFYAVYYFRKSSYLQPN 371
>gi|156548833|ref|XP_001605529.1| PREDICTED: hypothetical protein [Nasonia vitripennis]
Length = 558
Score = 36.3 bits (81), Expect = 4.4, Method: Composition-based stats.
Identities = 23/196 (11%), Positives = 51/196 (26%), Gaps = 4/196 (2%)
Query: 65 VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY 124
FL ++++ A P + L ++ + + A +
Sbjct: 31 EEFLSRRDYTGALTLLEFNETANPASSNKDSRLWIAYCSFHLGDYRKAADIYEVLRKSAD 90
Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184
+ Y Y M + ++ Y
Sbjct: 91 GKDAPELGTYVACCYFYLGMYPESQKILADAPDSQLKTRLLLHLAYKLSDKTQLEEYEEK 150
Query: 185 GRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244
R+ + +YL+ A +++L N + Y L D
Sbjct: 151 LRDIAEDQLCLASVHYLRAHYQEAIDIYKKVLLENREYLALN----VYVALCYYKLDYYD 206
Query: 245 EAREVVSLIQERYPQG 260
A++V+ + ++YP
Sbjct: 207 VAQDVLQVYLQKYPDS 222
>gi|148658487|ref|YP_001278692.1| hypothetical protein RoseRS_4409 [Roseiflexus sp. RS-1]
gi|148570597|gb|ABQ92742.1| Tetratricopeptide TPR_2 repeat protein [Roseiflexus sp. RS-1]
Length = 620
Score = 36.3 bits (81), Expect = 4.4, Method: Composition-based stats.
Identities = 16/114 (14%), Positives = 45/114 (39%), Gaps = 5/114 (4%)
Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
++ ++ + + +V+ + G ++G + A+ +++ +A
Sbjct: 504 IKAFFMLLVGLSWRDFYGPKERFVSEVHGSTDYELFNTGLALQRKGMWWMAMKQWEAAVA 563
Query: 219 NYS-DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
N D ++ + L AY L ++ARE ++ + P + V+ ++
Sbjct: 564 NSPRDTDY----LHALTVAYAKLGEWEKARETIAKAIKVAPDNPALKQVQERIE 613
>gi|33862430|ref|NP_893990.1| hypothetical protein PMT0157 [Prochlorococcus marinus str. MIT
9313]
gi|33640543|emb|CAE20332.1| conserved hypothetical protein [Prochlorococcus marinus str. MIT
9313]
Length = 270
Score = 36.3 bits (81), Expect = 4.4, Method: Composition-based stats.
Identities = 24/206 (11%), Positives = 57/206 (27%), Gaps = 3/206 (1%)
Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
++E+A+ +E +F A +++ P A + + + E
Sbjct: 40 LFEQALEASREGDFQAALPLWDEFLELAPEQPAAWSNRGNVRLILGDPEGAIVDQTRAME 99
Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPY---DQRATKLMLQYMSRIVERYTNSPYVK 176
+ + V + Q D + L + ++ + +
Sbjct: 100 LAPAELDPHLNRGIAEEVLHHWQQAANDYNWVLERDAVNASALYNLGNVLGSQGDWLQAE 159
Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
+ A + GE+ A + ++ Y A++ L+
Sbjct: 160 ALYRKASDVSPDFAMASCSKALAVYQLGEFDLAEKELRALIRRYPMFADPRAALSGLLWH 219
Query: 237 YVALALMDEAREVVSLIQERYPQGYW 262
Y + + + RY Q W
Sbjct: 220 YGSFGEAESHWNAAVGLDNRYRQRDW 245
>gi|255101257|ref|ZP_05330234.1| putative multiprotein-complex assembly protein [Clostridium
difficile QCD-63q42]
Length = 623
Score = 36.3 bits (81), Expect = 4.4, Method: Composition-based stats.
Identities = 19/231 (8%), Positives = 58/231 (25%), Gaps = 21/231 (9%)
Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
Y + A ++ +E+++ A +Y+ + + L
Sbjct: 291 EKAKTYYKMAAEDDITEAKNNLAGIYFEEKDYENAIKYYEDAIAVGCKSSLENLGDLYYQ 350
Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK----- 156
+ + D +S+ + + + + +
Sbjct: 351 NQDIEKAISYYSRIPNNVSCQIKLGNIYEDLNNIEEAISWYKKASENGDTRSSYRLGCIY 410
Query: 157 -------LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
+Y + + + R Y G+ + + +
Sbjct: 411 ESLGNTKNARKYFEMASSKNHMNARIHLGRIYFREGKLEESKMMFDTPANENNVYAQHMV 470
Query: 210 IPRFQLVLANYSDAEHAE---------EAMARLVEAYVALALMDEAREVVS 251
+ + +Y +++ E++ L + Y+ L EA +
Sbjct: 471 GLIYDMFYKDYVNSKFWYEKARAQGCVESIYNLGQIYLKLNDDAEAEKYYK 521
>gi|158520971|ref|YP_001528841.1| TPR repeat-containing protein [Desulfococcus oleovorans Hxd3]
gi|158509797|gb|ABW66764.1| Tetratricopeptide TPR_2 repeat protein [Desulfococcus oleovorans
Hxd3]
Length = 350
Score = 36.3 bits (81), Expect = 4.4, Method: Composition-based stats.
Identities = 26/251 (10%), Positives = 57/251 (22%), Gaps = 29/251 (11%)
Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
++ L +FF + L + + ++ + AY
Sbjct: 2 KINHKLLVVFFIAILSLLQACSSSFDVEERNLEIKNILDNYR--------GNTADLRAAY 53
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
+ +P + +L + E+ ++ +D
Sbjct: 54 KLLRPLLEKYPKNAMGFVNLCRLITKAGYIQGDEYDPGALEKAEKALDQAVALD------ 107
Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
+ R N + R A ++
Sbjct: 108 ---------------PELFDAYYHGVFHYIRRNNLEKARQFTLKAQELRPGSAKTDLLFC 152
Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
L+ I R +AN +D +A L + Y ++ + E +
Sbjct: 153 ELALEEDNPEEVIRRANSAIANSNDTSVLHDAYFALSKTYKKRKEYEKVVNIYRKTIEIF 212
Query: 258 PQGYWARYVET 268
P W
Sbjct: 213 PDDPWNMDAYA 223
>gi|94971556|ref|YP_593604.1| hypothetical protein Acid345_4530 [Candidatus Koribacter versatilis
Ellin345]
gi|94553606|gb|ABF43530.1| hypothetical protein Acid345_4530 [Candidatus Koribacter versatilis
Ellin345]
Length = 777
Score = 36.3 bits (81), Expect = 4.4, Method: Composition-based stats.
Identities = 10/49 (20%), Positives = 20/49 (40%), Gaps = 4/49 (8%)
Query: 221 SDAEHAEEAMARLVEA--YVALALMDEA--REVVSLIQERYPQGYWARY 265
D EA+ +V A Y + + ++ L+ +YP+ W +
Sbjct: 724 PDDPRIPEALHLVVRATRYGCGDDKNSSYSKQAFQLLHSKYPKSEWTKK 772
>gi|332709295|ref|ZP_08429257.1| hypothetical protein LYNGBM3L_39730 [Lyngbya majuscula 3L]
gi|332351841|gb|EGJ31419.1| hypothetical protein LYNGBM3L_39730 [Lyngbya majuscula 3L]
Length = 959
Score = 36.3 bits (81), Expect = 4.5, Method: Composition-based stats.
Identities = 26/199 (13%), Positives = 50/199 (25%), Gaps = 34/199 (17%)
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
Y++ +L ++ +S+A Q + P +G L + Q + A S +
Sbjct: 8 YQQVKAYLAKKQWSQAVACCRQALKRQPDSGEFNVLLGFALAAQGKPRQAIYAYSKAVQL 67
Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
Q + + + + +
Sbjct: 68 -------------------------------QPEQAQTHACLGELYSKLKDLSTAEWHYQ 96
Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
+ A +G K E+ AA +Q +A +A L Y
Sbjct: 97 QAVWLQPGQAEYHYNLGITRHKLWEWDAAKESYQQAIALNPKD---AKAHYHLGVLYGER 153
Query: 241 ALMDEAREVVSLIQERYPQ 259
+ EA P
Sbjct: 154 GQLKEATNSYRQAITNQPD 172
>gi|311693601|gb|ADP96474.1| tetratricopeptide TPR_2 repeat protein [marine bacterium HP15]
Length = 592
Score = 36.3 bits (81), Expect = 4.5, Method: Composition-based stats.
Identities = 20/261 (7%), Positives = 57/261 (21%), Gaps = 19/261 (7%)
Query: 19 LYKFALTIFFSIAVCFLVGWER----------------QSSRDVYLDSVTDVRYQREVYE 62
++K +F + L G + +Y
Sbjct: 11 MHKSVPFLFTCLLGLTLAGCASLTGTEEAPAKSETVAAGEKTEPQPPVEYADFEPETLYL 70
Query: 63 K--AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
A + + + + + ++ V +++ ++ + + Q A +
Sbjct: 71 LLSAEIAAQRGRYDITLVNYLKAAKQSRDQVVIERAMRIAQSLNGDNAQKQLAELWLDID 130
Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
+ + + ++ I +
Sbjct: 131 PDNLQAHRISAIQAVKGNDLQTAIHHMERIMDQGGDADFDSLAAIAANLPPEQQQELLAL 190
Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
Y + E+E L + +L +A A+ +
Sbjct: 191 YNEMSDRHPDTPELEYSIALLLKVTGQPQQALDRLEPLLQENANFQP-AIILKGDLLYQT 249
Query: 241 ALMDEAREVVSLIQERYPQGY 261
A + + R+P
Sbjct: 250 GQKSSALDYLLTNTRRFPGNR 270
>gi|89075799|ref|ZP_01162187.1| hypothetical protein SKA34_03129 [Photobacterium sp. SKA34]
gi|89048531|gb|EAR54106.1| hypothetical protein SKA34_03129 [Photobacterium sp. SKA34]
Length = 240
Score = 36.3 bits (81), Expect = 4.5, Method: Composition-based stats.
Identities = 12/91 (13%), Positives = 27/91 (29%)
Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
F + +A V+A+ D+ +A+ +L
Sbjct: 146 FLTAYPNSVYKPNASYWLGQLFFAQNQLADAATNFKVVADTKDSSKRADALLKLGVIAER 205
Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETLV 270
+ A+ + + YP +A +T +
Sbjct: 206 GNDIAAAKTYYQEVIKAYPNSTYANQAKTAL 236
>gi|70990982|ref|XP_750340.1| DnaJ and TPR domain protein [Aspergillus fumigatus Af293]
gi|66847972|gb|EAL88302.1| DnaJ and TPR domain protein [Aspergillus fumigatus Af293]
gi|159130814|gb|EDP55927.1| DnaJ and TPR domain protein [Aspergillus fumigatus A1163]
Length = 693
Score = 36.3 bits (81), Expect = 4.5, Method: Composition-based stats.
Identities = 25/194 (12%), Positives = 52/194 (26%), Gaps = 17/194 (8%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFA-GVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
E+ K +++ KA E +++ P + K L A + +Y+ A + E
Sbjct: 435 EEGNNAFKAKDYRKAIELWSEALEVDPQNKDMNSKILQNRAQAYINLKEYENAINDCNEA 494
Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
+ P +M + ++ + E ++
Sbjct: 495 LKLDPSYVKA-----------QKMRAKAYGGAGNWEEAIRDYKAVAEANPGEKGIQEDIR 543
Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY-SDAEHAEEA----MARLVE 235
+ K+ K ++ + Y D EA + E
Sbjct: 544 RAEFELKKAQRKDYYKILGVSKDASESEIKKAYRKLAIQYHPDKNRDGEAGDEKFKEIGE 603
Query: 236 AYVALALMDEAREV 249
AY L +
Sbjct: 604 AYETLIDPQKRAAY 617
>gi|189054119|dbj|BAG36639.1| unnamed protein product [Homo sapiens]
Length = 459
Score = 36.3 bits (81), Expect = 4.5, Method: Composition-based stats.
Identities = 24/233 (10%), Positives = 68/233 (29%), Gaps = 14/233 (6%)
Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQN---------FSKAYEYFNQCSRDFPFAG 91
+ + ++ + Y+ +++++ L + +A + + +
Sbjct: 163 KPNEGAIVEVALEGYYKDKLFDQRELRFEIGEGENLDLPYGLERAIQRMEKGEHSIVYLK 222
Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151
+ + + L + + ES ++ L + + V +
Sbjct: 223 PSYAFGSVGKEKFQIPPNAELKYELHLKSFEKAKESWEMNSEEKLEQSTIVKERGTVYFK 282
Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
+ K L +IV + F + A + + + A
Sbjct: 283 EGKYKQALLQYKKIVSWLEY-----ESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSA 337
Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
+ + E+ + R EA++ + + AR + + YP A+
Sbjct: 338 AIESCNKALELDSNNEKGLFRRGEAHLTVNDFELARADFQKVLQLYPNNKAAK 390
>gi|126173977|ref|YP_001050126.1| TPR repeat-containing protein [Shewanella baltica OS155]
gi|153000269|ref|YP_001365950.1| Tol-Pal system YbgF [Shewanella baltica OS185]
gi|217973702|ref|YP_002358453.1| tol-pal system protein YbgF [Shewanella baltica OS223]
gi|125997182|gb|ABN61257.1| Tetratricopeptide TPR_2 repeat protein [Shewanella baltica OS155]
gi|151364887|gb|ABS07887.1| Tol-Pal system YbgF [Shewanella baltica OS185]
gi|217498837|gb|ACK47030.1| tol-pal system protein YbgF [Shewanella baltica OS223]
Length = 249
Score = 36.3 bits (81), Expect = 4.5, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 33/79 (41%), Gaps = 2/79 (2%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
LK +Y AIP F+ + Y D+ +A A L + + EA++
Sbjct: 130 YESAVNLVLKERKYDDAIPAFRAFIKQYPDSVYAANANYWLGQLLFNKSEFAEAKQAFKT 189
Query: 253 IQERYPQGYWARYVETLVK 271
+ +R+ + ++LVK
Sbjct: 190 VVDRFSDSN--KRGDSLVK 206
>gi|24374287|ref|NP_718330.1| hypothetical protein SO_2746 [Shewanella oneidensis MR-1]
gi|24348825|gb|AAN55774.1|AE015714_1 conserved hypothetical protein [Shewanella oneidensis MR-1]
Length = 250
Score = 36.3 bits (81), Expect = 4.5, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 34/79 (43%), Gaps = 2/79 (2%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
LK +Y AIP F+ + Y D+ +A A L + + EA++V +
Sbjct: 131 YESAVNLVLKERKYDDAIPAFRAFIKQYPDSVYAANANYWLGQLLFNKSEFAEAKQVFNT 190
Query: 253 IQERYPQGYWARYVETLVK 271
+ R+ + ++LVK
Sbjct: 191 VVTRFSDSN--KRGDSLVK 207
>gi|254424741|ref|ZP_05038459.1| Tetratricopeptide repeat family [Synechococcus sp. PCC 7335]
gi|196192230|gb|EDX87194.1| Tetratricopeptide repeat family [Synechococcus sp. PCC 7335]
Length = 1555
Score = 36.3 bits (81), Expect = 4.6, Method: Composition-based stats.
Identities = 26/252 (10%), Positives = 62/252 (24%), Gaps = 23/252 (9%)
Query: 15 WAYQLYKFALTIFFSIAVCFLVGWERQSS--RDVYLDSVT----------DVRYQREVYE 62
Y+ +F IA FL+ S + D +T D +++
Sbjct: 1 MTVMFYQKPALLFLPIAATFLINPAIAQSMAEETAADLLTSQTIAHTVEEDSTAADALFQ 60
Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
+ + ++ A + + G + + Q + +
Sbjct: 61 QGETAYRAGDYDTAMSRWEVAIAHYQQTGDIEAEAIALNKLGLVNRTLGQYDDAIDYFTQ 120
Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYV 182
+++ + L +E + ++
Sbjct: 121 SLSAARSSSSAEAEAIALDSLGTVY--LLLGDYSEALPLFEESLEIN------ESIDNHI 172
Query: 183 TVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA---EEAMARLVEAYVA 239
N V + + L + + A+ +Q L A + A L +
Sbjct: 173 GRADNIDHIGSVYLSQQDLDQQDLPKALSYYQQSLEISRAASYRVGEARAAVNLGIVHFT 232
Query: 240 LALMDEAREVVS 251
L ++A
Sbjct: 233 LKNYEQAITAYE 244
>gi|90410871|ref|ZP_01218885.1| Hypothetical fimbrial biogenesis and twitching motility protein
[Photobacterium profundum 3TCK]
gi|90328084|gb|EAS44395.1| Hypothetical fimbrial biogenesis and twitching motility protein
[Photobacterium profundum 3TCK]
Length = 251
Score = 36.3 bits (81), Expect = 4.6, Method: Composition-based stats.
Identities = 27/244 (11%), Positives = 75/244 (30%), Gaps = 9/244 (3%)
Query: 27 FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD 86
+ + LVG + + + + +L + + +A E
Sbjct: 6 LYPLLCSLLVGCITVQEIGNKKEFNRIDASEARI-ALGLSYLNDGQWQRARE---NLETA 61
Query: 87 FPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146
+A ++ A+ + + A S+ + + P++ +V Y + S +
Sbjct: 62 LKYAPRYYRAQNAMAYYFQTVDENDAAESMYRKALRDSPKNGDVLNNYGVFLCSEQRYDD 121
Query: 147 DVPYDQRATKL-MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE 205
+ ++A K +S E KG + + + + L+ +
Sbjct: 122 AIKAFEKAIKQPYYYLISASYENAGLCSLKKGDNSQAQFYFKKSLSHDPYRPKSILQLAQ 181
Query: 206 YVAAIPRFQLV----LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
F+ + +++ L++ + E + L++E++P
Sbjct: 182 LEIESDNFKDARVMLFKFNKRYGYKADSLWLLIQLENQAGRLTEVDKYAVLLKEQFPDSQ 241
Query: 262 WARY 265
+
Sbjct: 242 QYQK 245
>gi|332708569|ref|ZP_08428543.1| hypothetical protein LYNGBM3L_27100 [Lyngbya majuscula 3L]
gi|332352666|gb|EGJ32232.1| hypothetical protein LYNGBM3L_27100 [Lyngbya majuscula 3L]
Length = 797
Score = 36.3 bits (81), Expect = 4.6, Method: Composition-based stats.
Identities = 17/207 (8%), Positives = 49/207 (23%), Gaps = 10/207 (4%)
Query: 43 SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102
RD + + +++++ + L+ F + E + Q + + + ++
Sbjct: 27 PRDAIVQVAINQAEADKLFKQGLSHLRRSKFPEGLESWQQALVIYKQ--IGDRLGEANSL 84
Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
Q + + + + + + K + Y
Sbjct: 85 NNLGNAYNHLGDYKKAIDYYQKSLAIAREIGHREGEAGSLTNLGNAYQNLGDYKKAIDYY 144
Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
+ + G + + + + YS
Sbjct: 145 QQSIAIDRKISDRLGEASSLNNLGSAYDNLGDYKKAIDYHQQSLAIVREISDRLGEAYS- 203
Query: 223 AEHAEEAMARLVEAYVALALMDEAREV 249
+ L AY L +A +
Sbjct: 204 -------LNNLGNAYYDLGDYKKAIDY 223
>gi|325473138|gb|EGC76334.1| hypothetical protein HMPREF9353_02527 [Treponema denticola F0402]
Length = 1119
Score = 36.3 bits (81), Expect = 4.6, Method: Composition-based stats.
Identities = 31/264 (11%), Positives = 73/264 (27%), Gaps = 18/264 (6%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
Y+F I + + +V S + + Y++ + ++ + +A +
Sbjct: 550 YRFVHKILPAAILTTVVLCFIFSIFVLVWQFIYKPVVAEGYYKEGMTSIESGQYERAIKR 609
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
F++ K + L ++ +
Sbjct: 610 FDEAGTYKKKRKWYFKFANAFREKKQFLSAETIYERLLSDFNHDRQGGIEYADMLSTDLR 669
Query: 140 SYAQ----MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
+Y + + R V + L + + + + K T +
Sbjct: 670 NYEKAEKVLKRGVLDYHINDQGTLLALGDVYLDWADEDSTKYEEARKTYASLINLYGSKD 729
Query: 196 IGRYYLKRGEYVAAIPRFQLVLANY------SDAEHAEEAMARLVEAYV--------ALA 241
+ + R L L NY D + E + L + Y +
Sbjct: 730 VFSGRMMRYFIRTDNLAEVLPLKNYFLNKKLPDEDLIELSGYLLEKRYEPKPTDSENLIG 789
Query: 242 LMDEAREVVSLIQERYPQGYWARY 265
+D+ RE++ ++ P+ A Y
Sbjct: 790 KIDDLRELLEKSIKKRPESPEANY 813
>gi|291514137|emb|CBK63347.1| SusD family [Alistipes shahii WAL 8301]
Length = 427
Score = 36.3 bits (81), Expect = 4.6, Method: Composition-based stats.
Identities = 20/239 (8%), Positives = 56/239 (23%), Gaps = 13/239 (5%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K R + + ++ ++
Sbjct: 1 MKKILFHFTLVFLAAAGFSCAGDLDRFSRYSIPPEAVTEADL-----PAMRMG------- 48
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
++ P ++ ++ ++G + + + Y + Y Y L
Sbjct: 49 VYSSFQSGGPGVRSYIMFDILGGNIRGNSGTSKDQINSMLSSLNSYQNTSWAGYFYILYQ 108
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
++ + L L + + Q +
Sbjct: 109 VNNLIKAAEKYPGSSEATLALGESHYFRAYLYYCMVTRWGDMPILRENTQENVPRDPAEQ 168
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
+ E + +Y H + A+A + ++ EA E+ + +Y
Sbjct: 169 VWNFIEEELELALDLLGSSKSYYYVSH-DAAVALMARVKLSRGKKTEAAELAESLIGKY 226
>gi|218665769|ref|YP_002425648.1| TPR domain/sulfotransferase domain protein [Acidithiobacillus
ferrooxidans ATCC 23270]
gi|218517982|gb|ACK78568.1| TPR domain/sulfotransferase domain protein [Acidithiobacillus
ferrooxidans ATCC 23270]
Length = 695
Score = 36.3 bits (81), Expect = 4.6, Method: Composition-based stats.
Identities = 27/231 (11%), Positives = 62/231 (26%), Gaps = 7/231 (3%)
Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
+S + + + + + L++++FS A +Y+ Q P +L
Sbjct: 132 ESREYLERVRTAEPKDPKVLNNLGNTCLRQRDFSAAEQYWRQAMSLDPAYPQPYSNLAKL 191
Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNV---DYVYYLVGMSYAQMIRDVPYDQRATKL 157
+ A ++ + + + + Q
Sbjct: 192 LTDRGEIEAAIDAGRRAITLDPHLTDAYINLAAAEQERHNPDAALRWVEALLAFQPQNAQ 251
Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
+ +++ P A + A E G G + A+ +
Sbjct: 252 AWSTKATLLKEAERLPEALQAAEQAVQHAPESADAEYARGSVLQALGRHEEALAAYAKAG 311
Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYP--QGYWARYV 266
+ AE+A+ ++ EA ER+P W +
Sbjct: 312 EL-PGVK-AEDALISQAVLHMEQGARTEAERFFEKTIERFPHSASAWYNWA 360
>gi|319651665|ref|ZP_08005792.1| YrrB protein [Bacillus sp. 2_A_57_CT2]
gi|317396732|gb|EFV77443.1| YrrB protein [Bacillus sp. 2_A_57_CT2]
Length = 221
Score = 36.3 bits (81), Expect = 4.7, Method: Composition-based stats.
Identities = 22/213 (10%), Positives = 54/213 (25%), Gaps = 6/213 (2%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
+ + +++E + +A + F + + P V+ + K +
Sbjct: 5 QMGIQYMQEGKWEEAAKVFMEAIEENPSDSVSYINFGNVLSAVGENEKALKLYEKAIGLD 64
Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI---VERYTNSPYVKGA 178
+ Y + + + + + +
Sbjct: 65 ENAAAAYYSAGNLYYELQHFDEAKKMFETALKKGLETGDNFFMLGMSLTALDQGKLALPY 124
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
A + G + AI + + + + +A L AY
Sbjct: 125 LQRSVELNENDAEAHFQYGLCLAQLDYIDEAIQQMKKCIEIEPE---HADAYYNLGVAYG 181
Query: 239 ALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+EA + E P A Y + L++
Sbjct: 182 FKEQENEALSYFNRALEIQPDHMLAGYGKKLIE 214
>gi|304387384|ref|ZP_07369576.1| type IV pilus biogenesis/stability protein PilW [Neisseria
meningitidis ATCC 13091]
gi|304338635|gb|EFM04753.1| type IV pilus biogenesis/stability protein PilW [Neisseria
meningitidis ATCC 13091]
Length = 253
Score = 36.3 bits (81), Expect = 4.7, Method: Composition-based stats.
Identities = 28/242 (11%), Positives = 64/242 (26%), Gaps = 8/242 (3%)
Query: 28 FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87
S+ + +G S R + V + + A+ +++ Q++ +A +
Sbjct: 9 ISLLLVLALGACSTSYRPSRAEKANQVSNIKT--QLAMEYMRGQDYRQATASIEDALKSD 66
Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147
P +A + Q + I N +Y ++L G
Sbjct: 67 PKNELAWLVRAE-IYQYLKVNDKAQKSFRQALSIKPDSAEINNNYGWFLCGRLNRPAESM 125
Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG---RYYLKRG 204
+D+ +G + A + + + +
Sbjct: 126 AYFDKALADPTYPTPYIANLNKGICSAKQGQFGLAEAYLKRSLAAQPQFPPAFKELARTK 185
Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLV--EAYVALALMDEAREVVSLIQERYPQGYW 262
+ Y +A L+ + AL A E + +Q +P
Sbjct: 186 MLAGQLGDADYYFKKYQSRVEVLQADDLLLGWKIAKALGNAQAAYEYEAQLQANFPYSEE 245
Query: 263 AR 264
+
Sbjct: 246 LQ 247
>gi|227485366|ref|ZP_03915682.1| ABC superfamily ATP binding cassette transporter, binding protein
[Anaerococcus lactolyticus ATCC 51172]
gi|227236657|gb|EEI86672.1| ABC superfamily ATP binding cassette transporter, binding protein
[Anaerococcus lactolyticus ATCC 51172]
Length = 294
Score = 36.3 bits (81), Expect = 4.7, Method: Composition-based stats.
Identities = 5/74 (6%), Positives = 25/74 (33%), Gaps = 9/74 (12%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQ---------REVYEKAVLFLK 69
+ K + + +A+ ++ + + + ++V + ++
Sbjct: 1 MKKISKILIAILALASFTACGAKNQEAKAEKAPEQTKTEAASEDKFKDKDVIKLGLIGEN 60
Query: 70 EQNFSKAYEYFNQC 83
+++ A + F +
Sbjct: 61 NEDWEDAAKRFEKA 74
>gi|119511358|ref|ZP_01630471.1| TPR repeat protein [Nodularia spumigena CCY9414]
gi|119463980|gb|EAW44904.1| TPR repeat protein [Nodularia spumigena CCY9414]
Length = 250
Score = 36.3 bits (81), Expect = 4.7, Method: Composition-based stats.
Identities = 20/224 (8%), Positives = 50/224 (22%), Gaps = 17/224 (7%)
Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVY--------------LDSVTDVRYQREVY 61
Y + + I S+ F+VG + L + ++++
Sbjct: 1 MYSMVFWRCLIASSVMSLFMVGCGDGTGTSTKYATQVVQEINVAQLLTEAEASQKAQKLF 60
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
++A L Q++ A + +++ P + + + +
Sbjct: 61 DQANGLLDTQDYQDAVQVYDKAIAVQPKNPDTWINRGNALTSLQQYSEALASYEQAIALQ 120
Query: 122 TQYPESKNVDYVYYLVGMSY---AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
E+ Y Q ++ + P +
Sbjct: 121 PNKDEAWYNRGNALTSLQKYPEALASYDQAIALQPTKHEAWINRGIVLTKMEKYPEALES 180
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
+ Y + AI Q +
Sbjct: 181 YNQAIAIQPNKHQAYYNKACAYALQENINLAIENLQKAIELIPG 224
>gi|170725899|ref|YP_001759925.1| type IV pilus biogenesis/stability protein PilW [Shewanella woodyi
ATCC 51908]
gi|169811246|gb|ACA85830.1| type IV pilus biogenesis/stability protein PilW [Shewanella woodyi
ATCC 51908]
Length = 262
Score = 36.3 bits (81), Expect = 4.7, Method: Composition-based stats.
Identities = 29/252 (11%), Positives = 70/252 (27%), Gaps = 10/252 (3%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDS--VTDVRYQREVYEKAVLFLKEQNFSKAYE 78
K ALTI S + V + DV + +V ++ + + +L++ N +A
Sbjct: 8 KIALTILLSSMLSACVSQSTYTGTDVPVTEREFDNVLAAQKRAQLGLTYLRKGNSQQAKY 67
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD-----YV 133
++ P S+ + + + N
Sbjct: 68 NLDKAVEFAPNIQDVHISMAYYYQTVGELENAEDSYRKAINARDASGDGLNNFGVFLCQQ 127
Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
+ + + + + + + +
Sbjct: 128 EKYKESEKMFLRAVKMPSYTRSGDSYENLGICSRKAGEIEKARKYFSTALRYNPRSGSTL 187
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+E+ ++ Y+ A + + + E++ VE L + ARE L+
Sbjct: 188 LELTEIEIEEHNYLDARAQLARYHRVIAQS---AESLTLGVEIERGLNDEEAAREFGILL 244
Query: 254 QERYPQGYWARY 265
++P A+
Sbjct: 245 LAKFPSSIEAKR 256
>gi|157164662|ref|YP_001467026.1| methyl-accepting chemotaxis sensory transducer [Campylobacter
concisus 13826]
gi|112800064|gb|EAT97408.1| Sel1 repeat family [Campylobacter concisus 13826]
Length = 183
Score = 36.3 bits (81), Expect = 4.7, Method: Composition-based stats.
Identities = 14/65 (21%), Positives = 22/65 (33%), Gaps = 3/65 (4%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ KF I F ++ G Q S + + E A+ E N+ KA +
Sbjct: 1 MKKF---IIFLFSILLFWGCSAQQLSQNLGLSEPPLDPEVEQIADAIYLYNEGNYQKACK 57
Query: 79 YFNQC 83
F
Sbjct: 58 RFYDY 62
>gi|323344909|ref|ZP_08085133.1| hypothetical protein HMPREF0663_11669 [Prevotella oralis ATCC
33269]
gi|323094179|gb|EFZ36756.1| hypothetical protein HMPREF0663_11669 [Prevotella oralis ATCC
33269]
Length = 162
Score = 36.3 bits (81), Expect = 4.7, Method: Composition-based stats.
Identities = 6/42 (14%), Positives = 13/42 (30%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV 60
+ K + +C L S + D V +++
Sbjct: 1 MMKTIKLFLLAFVLCLLAACSSSSDDNGTKDKEKPVISDKDI 42
>gi|150026470|ref|YP_001297296.1| hypothetical protein FP2442 [Flavobacterium psychrophilum JIP02/86]
gi|149773011|emb|CAL44495.1| Protein of unknown function [Flavobacterium psychrophilum JIP02/86]
Length = 447
Score = 36.3 bits (81), Expect = 4.7, Method: Composition-based stats.
Identities = 27/235 (11%), Positives = 74/235 (31%), Gaps = 3/235 (1%)
Query: 30 IAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPF 89
+ + ++ D V++ +E Y ++++ +N+ KA +C + P
Sbjct: 11 LIFGMCIISASVLAQTQPEDVVSEKDDFKESYYESLIQKGIENYDKAIVSLEKCVKIQPE 70
Query: 90 AGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVP 149
V L + F+Q +QA + T+ Y Y +Y + +
Sbjct: 71 NAVIYHELGKNYFLQKDNQNAEQAFIKATQLDTKNKWYLIDLYDVYYQTKNYNRALDIAQ 130
Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
+ + + + ++ + + ++
Sbjct: 131 KIIPLDAKFKEDLVSLYMYTQQFDKALVLINELDENVGNTELRDRYRLQITSQTKTNLSD 190
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
+ + + + E ++ + Y ++A +VV +++ P WA+
Sbjct: 191 KNTLEKAIEQWPNNEENYLSLIYM---YSDNNQEEKALQVVHKLEKNIPNSSWAQ 242
>gi|186683665|ref|YP_001866861.1| hypothetical protein Npun_R3512 [Nostoc punctiforme PCC 73102]
gi|186466117|gb|ACC81918.1| Tetratricopeptide TPR_2 repeat protein [Nostoc punctiforme PCC
73102]
Length = 535
Score = 36.3 bits (81), Expect = 4.7, Method: Composition-based stats.
Identities = 18/212 (8%), Positives = 44/212 (20%), Gaps = 2/212 (0%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
+ + +A F Q + P + + + + + + + +
Sbjct: 263 NQGKALRNLGRYEEALASFEQALKFQPDDYIVLNNKGIELWNLRRYEEALASYNEAVQIK 322
Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
P++ + Y + + + + + A
Sbjct: 323 PDDPQAWYNRGITLWDLERYEEALASYNEAVQIKPDYQEAWHNQGNTLGKLERYEEALAS 382
Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
K G+ +A A L
Sbjct: 383 YVRTVTIQPDKHEAWHGKGFALGQLGCDEEALTAFNEALKIKPDYHQAWYNRGHALSNLG 442
Query: 242 LMDEAREVVSLIQERYPQGY--WARYVETLVK 271
+EA + P + W L+K
Sbjct: 443 RNEEAIASYDQALKIKPDYHYAWYYKGAALIK 474
>gi|332260274|ref|XP_003279212.1| PREDICTED: intraflagellar transport protein 88 homolog isoform 1
[Nomascus leucogenys]
Length = 823
Score = 36.3 bits (81), Expect = 4.7, Method: Composition-based stats.
Identities = 21/193 (10%), Positives = 54/193 (27%), Gaps = 7/193 (3%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
KAV +L+++++++A E + A + L + + + +
Sbjct: 420 NKAVTYLRQKDYNQAVEILKMLEKKDSRVKSAAATNLSALYYMGKDFAQASSYADIAVNS 479
Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVP----YDQRATKLMLQYMSRIVERYTNSPYVKG 177
+Y + + + + + + + L + E+
Sbjct: 480 DRYNPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNRLDEALD 539
Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
+ A +I Y AI V++ +++L E Y
Sbjct: 540 CFLKLHAILRNSAEVLYQIANIYELMENPSQAIEWLMQVVSVIPTDPQV---LSKLGELY 596
Query: 238 VALALMDEAREVV 250
+A +
Sbjct: 597 DREGDKSQAFQYY 609
>gi|224071766|ref|XP_002194606.1| PREDICTED: hypothetical protein [Taeniopygia guttata]
Length = 2509
Score = 36.3 bits (81), Expect = 4.7, Method: Composition-based stats.
Identities = 22/202 (10%), Positives = 49/202 (24%), Gaps = 10/202 (4%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
S ++ RE+ +++ +F A + Q + + K A+ +
Sbjct: 377 SKDELSEARELGNMGAVYIAMGDFENAVQCHEQHLKIAK--ELGNKREEARAYSNLGSAY 434
Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
+ + Y + + M + + + QY +
Sbjct: 435 HYRRNFDKAMSYHNYVLELAQELAEKAIEMRAYAGLGHAARCMQDLERAKQYHEEQLHIA 494
Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
+ + K L + A A
Sbjct: 495 ESLQDRAAEGRASSNLGIIHQMKGDYDTALRLHKTHLSIAQELSDYAAQG--------RA 546
Query: 230 MARLVEAYVALALMDEAREVVS 251
+ AY AL + D+A +
Sbjct: 547 YGNMGNAYNALGMYDQAVKYHR 568
>gi|86605310|ref|YP_474073.1| TPR repeat-containing protein [Synechococcus sp. JA-3-3Ab]
gi|86553852|gb|ABC98810.1| TPR repeat protein [Synechococcus sp. JA-3-3Ab]
Length = 396
Score = 36.3 bits (81), Expect = 4.7, Method: Composition-based stats.
Identities = 16/194 (8%), Positives = 42/194 (21%)
Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
+ +A + + +A + Q P +G A ++ + +
Sbjct: 146 EARFNQANTLRQLGRYQEALRAYEQVLTFRPDSGEAWHLHGLTLASLERWQEAVNSYDKA 205
Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
+ P + + YA+ + + + +
Sbjct: 206 LAINSSDPRVWQSRGLALVHLERYAEALASYERALQLGLESASLWAGHALAHHRLGNWME 265
Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
A Q + + L + Q EA
Sbjct: 266 ALNSYDRALQQDPRRSQIWVQRGLVLMDLNLYGLAIQSFDRALQMDPDDAEAHYAKACCC 325
Query: 238 VALALMDEAREVVS 251
+ +A + +
Sbjct: 326 AWEGQVPQALQALE 339
>gi|39998281|ref|NP_954232.1| TPR domain protein [Geobacter sulfurreducens PCA]
gi|39985227|gb|AAR36582.1| TPR domain protein [Geobacter sulfurreducens PCA]
gi|298507217|gb|ADI85940.1| TPR domain protein [Geobacter sulfurreducens KN400]
Length = 638
Score = 36.3 bits (81), Expect = 4.7, Method: Composition-based stats.
Identities = 23/204 (11%), Positives = 55/204 (26%), Gaps = 7/204 (3%)
Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
E + + + F KA E + ++ P + L + +
Sbjct: 265 PEEYLRRGDERMAAKEFPKAVEEYRAALKERPGSAEVLHKLSGAQAAAGLDDDAIASYRE 324
Query: 117 GEEY---ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
+ + Y + + + ++ I + P
Sbjct: 325 LLRVKPGNAANHYNLGIIYERKGLIDEAVVEYKQAVRLSAEHGDARRRLADIYTLRGSHP 384
Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
+ + +++ R ++ AI + L D EA L
Sbjct: 385 QAIEQYRELLKRGDSNPVLHLKLARGFMSSKNTKDAIASYNEALKLDPD---NLEAHREL 441
Query: 234 VEAYVALALMDEA-REVVSLIQER 256
Y L MD+A ++ +++ +
Sbjct: 442 AAVYRKLNQMDDASKQYREVLRIK 465
>gi|74222174|dbj|BAE26900.1| unnamed protein product [Mus musculus]
Length = 504
Score = 36.3 bits (81), Expect = 4.7, Method: Composition-based stats.
Identities = 22/258 (8%), Positives = 66/258 (25%), Gaps = 20/258 (7%)
Query: 34 FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93
L + + + + +A+ +++ A + ++ +
Sbjct: 131 VLKSNPSEQEEKEAESQLVKADEMQRLRSQALDAFDGADYTAAITFLDKILEVCVWDAEL 190
Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153
R+ + K + + E+ Y + + +V +
Sbjct: 191 RELRAECFIKEGEPRKAISDLKAASKLKSDNTEAFYKISTLYYQLGDHELSLSEVRECLK 250
Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK----------- 202
+ + + + + ++ A + GR A + E
Sbjct: 251 LDQDHKRCFAHYKQVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPSVAEYTVRSKE 310
Query: 203 -----RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA-REVVSLIQER 256
+ + ++ A+ EAY+ + DEA ++ + +
Sbjct: 311 RICHCFSKDEKPVEAIRICSEVLQMEPDNVNALKDRAEAYLIEEMYDEAIQDYEAAQEHN 370
Query: 257 YPQGYWA---RYVETLVK 271
+ L+K
Sbjct: 371 ENDQQIREGLEKAQRLLK 388
>gi|325124475|gb|ADY83998.1| type 4 fimbrial biogenesis protein [Acinetobacter calcoaceticus
PHEA-2]
Length = 255
Score = 36.3 bits (81), Expect = 4.8, Method: Composition-based stats.
Identities = 25/245 (10%), Positives = 68/245 (27%), Gaps = 13/245 (5%)
Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
+ G + ++ + VR + A ++ + A +Q
Sbjct: 3 IAVAFLVSGCQTTHTQKKDPEKAVKVRT-----QLAAEHIRSGDLDSAKRALDQALSVDS 57
Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDV 148
A + + + S ++A + I+ P++ Y + V
Sbjct: 58 RDATANMMMGILLQQEGSKPNLEKAEHYFKRAISSEPDNAQAHNNYGTYLYQMERYNDAV 117
Query: 149 PYD--------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
L+ + RI + + + + +E+ +
Sbjct: 118 EQFRIAGATLGYDQRYQALENLGRIYLKLGDVANAEKTFKQALLANRDSYISMLELAEIF 177
Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
+ + AA ++ + A+ V A A + +V+ ++ +P+
Sbjct: 178 YLQQQIPAATQMYEQYVRTVGQKNQGARALWIGVRVARANADKMGMQVLVNQLRALFPES 237
Query: 261 YWARY 265
+
Sbjct: 238 PEYQR 242
>gi|218510672|ref|ZP_03508550.1| hypothetical protein RetlB5_26548 [Rhizobium etli Brasil 5]
Length = 460
Score = 36.3 bits (81), Expect = 4.8, Method: Composition-based stats.
Identities = 22/200 (11%), Positives = 48/200 (24%), Gaps = 5/200 (2%)
Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ-YSAGKYQQ 112
+Y Y A+L + + +A ++ Q + P A L +
Sbjct: 256 PQYPEAHYNFAILLEETGHPDEAAAHYRQALKCRPDHVDALLRLAGLFDEWGDQFEAHHH 315
Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
N G + A Q + + +
Sbjct: 316 FREALRLRPGFAEAHNNFGVFLEKNGDAQAAESHYRQALQLRPDYAEAHYNYAMLLEGRD 375
Query: 173 PYVKGARFYVTVGR-NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231
+ + A +G ++G + A + + D +A
Sbjct: 376 VEAAELHYRAALSSLPMYAEAHNNLGVLLHEKGALIEARSHYLTAIRLRPDDPQIYRNLA 435
Query: 232 RLVEAYVALALMDEAREVVS 251
L+ A + ++A
Sbjct: 436 LLLAA---MGEEEQADRYAR 452
>gi|198416412|ref|XP_002123452.1| PREDICTED: similar to tetratricopeptide repeat domain 26, partial
[Ciona intestinalis]
Length = 407
Score = 36.3 bits (81), Expect = 4.8, Method: Composition-based stats.
Identities = 26/195 (13%), Positives = 59/195 (30%), Gaps = 6/195 (3%)
Query: 66 LFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP 125
FL ++++ A V + A+ + Y++A ++ ++ I +
Sbjct: 29 DFLDKRDYVGAITL---LEFQRRCGKVVPHLNMWIAYCWFHLADYKKAYAIYKKMIEKTD 85
Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
M + + + + + K V +
Sbjct: 86 CDPQALINLACCCMYLGLYDEAYTVLNTPQQDNFSILQSRLLFHLSHKLNKERNMMVHMS 145
Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
R + + + RG Y AI F+ +L + + L Y L D
Sbjct: 146 RLEDIDDKCSYYSLHFMRGNYEEAINSFKHLLNLDKNFAALK---VYLAMCYFKLEYYDV 202
Query: 246 AREVVSLIQERYPQG 260
A++ +S +++P
Sbjct: 203 AQDYLSEYLQQHPGS 217
>gi|162451294|ref|YP_001613661.1| hypothetical protein sce3022 [Sorangium cellulosum 'So ce 56']
gi|161161876|emb|CAN93181.1| hypothetical protein sce3022 [Sorangium cellulosum 'So ce 56']
Length = 496
Score = 36.3 bits (81), Expect = 4.8, Method: Composition-based stats.
Identities = 27/228 (11%), Positives = 61/228 (26%), Gaps = 19/228 (8%)
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
+E+A E+++ KA + P AR +L + ++ +
Sbjct: 86 WERAQKAFGERDYEKAISALKRIITMDPDDHAARLNLASAQANMGDHPAALKSFQAIRKT 145
Query: 121 ITQYPESK------NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
+ ++ + + + D + + + ++ Y N
Sbjct: 146 FQGDADYHVAVGQVHLAMQKKDAALDEMVLALEAKPDCQPALDAMVQLGVLLPIYENPRD 205
Query: 175 VKGARFYVT-----------VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
+ + A +E Y+ + + A+ + A +
Sbjct: 206 AASLVYVRADAVLEYLAGQWDAAPRDGAFYLEQLAYHERELRHDVALAAAERAAAASGEG 265
Query: 224 EHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY--WARYVETL 269
E A + A +L DEA P W + L
Sbjct: 266 ASRERAHLARIAALRSLGRTDEALGAAEAFVATAPSSSGAWVELAKCL 313
>gi|86606649|ref|YP_475412.1| TPR repeat-containing protein [Synechococcus sp. JA-3-3Ab]
gi|86555191|gb|ABD00149.1| tetratricopeptide repeat protein [Synechococcus sp. JA-3-3Ab]
Length = 272
Score = 36.3 bits (81), Expect = 4.8, Method: Composition-based stats.
Identities = 23/202 (11%), Positives = 55/202 (27%), Gaps = 34/202 (16%)
Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
++E+A +F++A +++Q + P + A +
Sbjct: 43 DRLFEEAFAATNRGDFARAEAFWSQLLQRQPDNPALWSNRGN--------------ARVS 88
Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
+ + + E + + R+++ N
Sbjct: 89 QNRLQEALEDYAEAIRLAPNAPDPYLNRGTALEGLGRWQEAIADYERVLQLDPN------ 142
Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
AA G GE+ A+ ++ D A +A L
Sbjct: 143 -----------DAAAYNNRGNAEAALGEWQQALADYRRATELAPDYAFA-QANYAL--CL 188
Query: 238 VALALMDEAREVVSLIQERYPQ 259
+ + A ++ + +YP+
Sbjct: 189 YQVGETEAALRLMRALVRKYPK 210
>gi|254785746|ref|YP_003073175.1| tetratricopeptide repeat domain-containing protein [Teredinibacter
turnerae T7901]
gi|237686851|gb|ACR14115.1| tetratricopeptide repeat domain protein [Teredinibacter turnerae
T7901]
Length = 449
Score = 36.3 bits (81), Expect = 4.8, Method: Composition-based stats.
Identities = 27/228 (11%), Positives = 57/228 (25%), Gaps = 14/228 (6%)
Query: 46 VYLDSVTDVRYQREV-YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
+ ++D ++ Y AV + +A ++ ++ + +
Sbjct: 128 DDAEEISDTYTLAQLHYRIAVYAHRTGQPERALQHLSKIEARNALSEQQSDYATLLFGTL 187
Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY--- 161
K + A + I+ + + V D
Sbjct: 188 LQNNKKHREAVKYYQSISPESTYFSHAQMNIAVAYIRQGWWTDAQLAINNALSSKAVNND 247
Query: 162 --------MSRIVERYTNSPYVK--GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
+ R N Y A +++ + + IG L +G+ V AI
Sbjct: 248 PELRNRLLLMLGYNRLKNEFYRDSRDAFRKISLESHYSNRAMLGIGLCALNQGDIVGAIN 307
Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
F + + EA A+ + A Y
Sbjct: 308 AFGYLKQKSENTISVAEAHLLYAYAHEKMGEKALASAQYEAAIAYYNG 355
>gi|258515769|ref|YP_003191991.1| hypothetical protein Dtox_2575 [Desulfotomaculum acetoxidans DSM
771]
gi|257779474|gb|ACV63368.1| hypothetical protein Dtox_2575 [Desulfotomaculum acetoxidans DSM
771]
Length = 306
Score = 36.3 bits (81), Expect = 4.8, Method: Composition-based stats.
Identities = 7/42 (16%), Positives = 15/42 (35%), Gaps = 1/42 (2%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV 60
+ K L +F + L G D L + ++++
Sbjct: 1 MKKTVLIVFILLLSISLFGC-TNKINDAQLKKEGQHQEEQQL 41
>gi|256830849|ref|YP_003159577.1| TPR repeat-containing protein [Desulfomicrobium baculatum DSM 4028]
gi|256580025|gb|ACU91161.1| TPR repeat-containing protein [Desulfomicrobium baculatum DSM 4028]
Length = 254
Score = 36.3 bits (81), Expect = 4.8, Method: Composition-based stats.
Identities = 23/247 (9%), Positives = 62/247 (25%), Gaps = 9/247 (3%)
Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
+ L G + + ++ + + + A + +
Sbjct: 8 LVLCFVLAGCGARGTSRGASSNMGSKEVELRL-NLIESHINNDQPQLALQELFKVEPAAK 66
Query: 89 FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV-----DYVYYLVGMSYAQ 143
M + + + E + E+ N + + A
Sbjct: 67 HMSRFHFDSGMIYIGLQELEQARDGFAKAVEIDEDFGEAWNNLGKVEEALGRDSEAEAAY 126
Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
+ + ++ R + + + + ++ +
Sbjct: 127 RKAIGILTYVTPEFPAYNLGVLLLRQGRASEAEELGRKALARNWRYIPAYKLLSDAFVAQ 186
Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
A + L D+ A+ E V + EARE+ + I ++YP+ A
Sbjct: 187 NRLDDAESVLKSGLEADMDSTSTILAL---AEHQVRMGKTAEARELFTRIVKQYPKSNEA 243
Query: 264 RYVETLV 270
+ +
Sbjct: 244 KLARDYL 250
>gi|209523829|ref|ZP_03272382.1| serine/threonine protein kinase with TPR repeats [Arthrospira
maxima CS-328]
gi|209495861|gb|EDZ96163.1| serine/threonine protein kinase with TPR repeats [Arthrospira
maxima CS-328]
Length = 754
Score = 36.3 bits (81), Expect = 4.8, Method: Composition-based stats.
Identities = 23/212 (10%), Positives = 53/212 (25%), Gaps = 8/212 (3%)
Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
L V+ + + ++ V L+ + A + F + + FP A + + +
Sbjct: 355 QVLSRPDPVKSEAAL-KRGVERLEAGDPEAAIKAFTRSIQLFPDNSEAFRKRANAYYDLQ 413
Query: 106 SAGKYQQAASLGEEYITQYPESKNV---DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
+ + + P+ Y + + V
Sbjct: 414 KYEQAIADYTQAIKLDPTNPDIYFNRSLAYHQMRDFGNAINDLNQVIRLNPEDTDAFYQR 473
Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD 222
N V + + G ++K G A + + + +
Sbjct: 474 GLAHYSQENYEAAILDYTEVIRRQPNNSEAYRARGSAHVKSGNLQAGMADYTEAIRLNPE 533
Query: 223 AEHAEEAMARLVEAYVALALMDEA-REVVSLI 253
+ A A L A + +I
Sbjct: 534 SAA---AYYNRGRARFHLGDYQGALADYNQVI 562
>gi|148270125|ref|YP_001244585.1| TPR repeat-containing protein [Thermotoga petrophila RKU-1]
gi|147735669|gb|ABQ47009.1| Tetratricopeptide TPR_2 repeat protein [Thermotoga petrophila
RKU-1]
Length = 357
Score = 36.3 bits (81), Expect = 4.8, Method: Composition-based stats.
Identities = 28/218 (12%), Positives = 59/218 (27%), Gaps = 37/218 (16%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
D + + ++ KA Y+ + P + + + +
Sbjct: 159 EIDPWLVQAYASLGEAYYNLGDYEKAIHYWERELEYNPNDKITYFMITEAYYEMNRKDLA 218
Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
+A E L +S++
Sbjct: 219 VKALERLLEI-------------------------------DPDNIPALYQLSQLYRELG 247
Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
N + + + + + R LK G Y + ++ + + A
Sbjct: 248 NEEKAREMEEKIMNCKPKYPTELEPWARVMLKHGRYKEVAEELEKIVES---SPLNTLAR 304
Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
LV YV L +D+ARE++ I + +W Y +
Sbjct: 305 LLLVVPYVKLGQIDKAREILDDIGQN---NFWYYYGKK 339
>gi|78223239|ref|YP_384986.1| TPR repeat-containing protein [Geobacter metallireducens GS-15]
gi|78194494|gb|ABB32261.1| TPR repeat protein [Geobacter metallireducens GS-15]
Length = 883
Score = 36.3 bits (81), Expect = 4.8, Method: Composition-based stats.
Identities = 25/245 (10%), Positives = 63/245 (25%), Gaps = 23/245 (9%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
++ + + I L ++ E+Y +AV L + N + A
Sbjct: 1 MFNRRIALICLIVAT-LSACGGKTK--------------EELYAEAVKELDKGNANGAIV 45
Query: 79 YF-NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
N +D + K V ++ + + ++ +Y +
Sbjct: 46 LLKNAVEKDQNYFDARYKLAKAYMTVGKFEQAEKEFQKALRQNPSNPEIRLDLAKLYNSI 105
Query: 138 GMSYAQ--MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
+ + + L+ + + + A+ ++
Sbjct: 106 NKPDESIAEAKAYLSARAGSADALEVIGTSYGQKKMFDEAEKYLKESLQAEPARASAMLQ 165
Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV-ALALMDEAREVVSLIQ 254
+ + YL + ++ A L Y ++A E I
Sbjct: 166 LAKVYLATKREQEGMGLLNEIVRKDPKNTKA----YYLAAFYEGYRGNSEKALEYYQKIM 221
Query: 255 ERYPQ 259
+ P
Sbjct: 222 QADPD 226
>gi|302879779|ref|YP_003848343.1| tol-pal system protein YbgF [Gallionella capsiferriformans ES-2]
gi|302582568|gb|ADL56579.1| tol-pal system protein YbgF [Gallionella capsiferriformans ES-2]
Length = 246
Score = 36.3 bits (81), Expect = 4.9, Method: Composition-based stats.
Identities = 14/99 (14%), Positives = 23/99 (23%)
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
+ + + + +E K Y A Q + Y
Sbjct: 99 LRHFESQEVSVQPKAEPAVSGDPDDPAAENRAIEAAYSLFKAANYANAAKALQEFIKKYP 158
Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
+ H A L E AL A + + P
Sbjct: 159 ASVHIPNAAYWLGETQFALKDYKGALVTYRALLKASPDT 197
Score = 35.9 bits (80), Expect = 6.0, Method: Composition-based stats.
Identities = 10/73 (13%), Positives = 26/73 (35%)
Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
+ +G +Y A+ ++ +L D A + + + + L + +A
Sbjct: 162 HIPNAAYWLGETQFALKDYKGALVTYRALLKASPDTARAPDVLFGIAGSQQELKAVTQAA 221
Query: 248 EVVSLIQERYPQG 260
+ + +YP
Sbjct: 222 ATLKQLVGKYPDS 234
>gi|218780662|ref|YP_002431980.1| hypothetical protein Dalk_2821 [Desulfatibacillum alkenivorans
AK-01]
gi|218762046|gb|ACL04512.1| hypothetical protein Dalk_2821 [Desulfatibacillum alkenivorans
AK-01]
Length = 858
Score = 36.3 bits (81), Expect = 4.9, Method: Composition-based stats.
Identities = 13/82 (15%), Positives = 25/82 (30%), Gaps = 1/82 (1%)
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
A + G ++ +R E A+ ++ L A R Y + D A +
Sbjct: 295 AEAYLAAGLHWERRAEISKALWCYEHGLKKMPQDHIASFLQYRAALIYHKMGREDLAEKG 354
Query: 250 VSLIQERYP-QGYWARYVETLV 270
+ +Y A +
Sbjct: 355 FERLITKYNANDRLAEKSARFL 376
>gi|126699740|ref|YP_001088637.1| putative multiprotein-complex assembly protein [Clostridium
difficile 630]
gi|255307132|ref|ZP_05351303.1| putative multiprotein-complex assembly protein [Clostridium
difficile ATCC 43255]
gi|115251177|emb|CAJ69008.1| putative multiprotein-complex assembly TPR repeat-containing
protein [Clostridium difficile]
Length = 623
Score = 36.3 bits (81), Expect = 4.9, Method: Composition-based stats.
Identities = 19/231 (8%), Positives = 58/231 (25%), Gaps = 21/231 (9%)
Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
Y + A ++ +E+++ A +Y+ + + L
Sbjct: 291 EKAKTYYKMAAEDDITEAKNNLAGIYFEEKDYENAIKYYEDAIAVGCKSSLENLGDLYYQ 350
Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK----- 156
+ + D +S+ + + + + +
Sbjct: 351 NQDIEKAISYYSRIPNNVSCQIKLGNIYEDLNNIEEAISWYKKASENGDTRSSYRLGCIY 410
Query: 157 -------LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
+Y + + + R Y G+ + + +
Sbjct: 411 ESLGNTKNARKYFEMASSKNHMNARIHLGRIYFREGKLEESKMMFDTPANENNVYAQHMV 470
Query: 210 IPRFQLVLANYSDAEHAE---------EAMARLVEAYVALALMDEAREVVS 251
+ + +Y +++ E++ L + Y+ L EA +
Sbjct: 471 GLIYDMFYKDYVNSKFWYEKARAQGCVESIYNLGQIYLKLNDDAEAEKYYK 521
>gi|94967854|ref|YP_589902.1| TPR repeat-containing protein [Candidatus Koribacter versatilis
Ellin345]
gi|94549904|gb|ABF39828.1| Tetratricopeptide repeat protein [Candidatus Koribacter versatilis
Ellin345]
Length = 502
Score = 36.3 bits (81), Expect = 4.9, Method: Composition-based stats.
Identities = 28/200 (14%), Positives = 54/200 (27%), Gaps = 5/200 (2%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG--EE 119
K ++ +A ++ + P R L MS F +
Sbjct: 226 NLGFCAFKVGDYPEAIRTLSRALEEQPQDAPVRAMLGMSYFGSNKYADAAKTFEPLGDRG 285
Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
+ + A + + + + L + ++ T+ +
Sbjct: 286 MQDTSVGYAWATSLARTGDLKKAADVLNHFENSNLSPDALLLVGQLWTEMTDYQHAVSVF 345
Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
V + L G YLK ++ A FQ LA +A L +
Sbjct: 346 QKVLLRDPSLPKAHFFEGLAYLKWEKWNEAASDFQAELALVPGDL---DAKYTLGFIRLQ 402
Query: 240 LALMDEAREVVSLIQERYPQ 259
+DEA + + P
Sbjct: 403 QGRVDEALAFFNEVLAAEPN 422
>gi|160939300|ref|ZP_02086651.1| hypothetical protein CLOBOL_04194 [Clostridium bolteae ATCC
BAA-613]
gi|158438263|gb|EDP16023.1| hypothetical protein CLOBOL_04194 [Clostridium bolteae ATCC
BAA-613]
Length = 436
Score = 36.3 bits (81), Expect = 4.9, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 24/87 (27%), Gaps = 3/87 (3%)
Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
+ V+ G G A+ FQ L D EA+ + Y
Sbjct: 349 RQDMTANIYQSLVDRGLQLWNAGNKTEAMDYFQASLTIKPD---NPEALFYVGRLYQDAG 405
Query: 242 LMDEAREVVSLIQERYPQGYWARYVET 268
D A + + +P + +
Sbjct: 406 DTDNANSMFDKVVNEFPDSEYVDRAKN 432
>gi|254975716|ref|ZP_05272188.1| putative multiprotein-complex assembly protein [Clostridium
difficile QCD-66c26]
gi|255093103|ref|ZP_05322581.1| putative multiprotein-complex assembly protein [Clostridium
difficile CIP 107932]
gi|255314845|ref|ZP_05356428.1| putative multiprotein-complex assembly protein [Clostridium
difficile QCD-76w55]
gi|255517519|ref|ZP_05385195.1| putative multiprotein-complex assembly protein [Clostridium
difficile QCD-97b34]
gi|255650630|ref|ZP_05397532.1| putative multiprotein-complex assembly protein [Clostridium
difficile QCD-37x79]
gi|306520560|ref|ZP_07406907.1| putative multiprotein-complex assembly protein [Clostridium
difficile QCD-32g58]
Length = 623
Score = 36.3 bits (81), Expect = 4.9, Method: Composition-based stats.
Identities = 19/231 (8%), Positives = 58/231 (25%), Gaps = 21/231 (9%)
Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
Y + A ++ +E+++ A +Y+ + + L
Sbjct: 291 EKAKTYYKMAAEDDITEAKNNLAGIYFEEKDYENAIKYYEDAIAVGCKSSLENLGDLYYQ 350
Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK----- 156
+ + D +S+ + + + + +
Sbjct: 351 NQDIEKAISYYSRIPNNASCQIKLGNIYEDLNNIEEAISWYKKASENGDTRSSYRLGCIY 410
Query: 157 -------LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
+Y + + + R Y G+ + + +
Sbjct: 411 ESLGNTKNARKYFEMASSKNHMNARIHLGRIYFREGKLEESKMMFDTPANENNVYAQHMV 470
Query: 210 IPRFQLVLANYSDAEHAE---------EAMARLVEAYVALALMDEAREVVS 251
+ + +Y +++ E++ L + Y+ L EA +
Sbjct: 471 GLIYDMFYKDYVNSKFWYEKARAQGCVESIYNLGQIYLKLNDDAEAEKYYK 521
>gi|323489377|ref|ZP_08094606.1| hypothetical protein GPDM_08490 [Planococcus donghaensis MPA1U2]
gi|323396871|gb|EGA89688.1| hypothetical protein GPDM_08490 [Planococcus donghaensis MPA1U2]
Length = 507
Score = 36.3 bits (81), Expect = 5.0, Method: Composition-based stats.
Identities = 24/207 (11%), Positives = 61/207 (29%), Gaps = 3/207 (1%)
Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
++ + + ++ + Y KA+ L+ +N+ KA++Y + + P V +
Sbjct: 2 ENKKRNDKNILSFIPTGEFYYRKAMKELQRENYPKAHKYLRRATELSPKDAVFLTQYGIV 61
Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
+ + A E + P + +
Sbjct: 62 LMEMHEFEQAMDALHAAHELDAKDPTILFFLAEVHAHMGLFWDARNYAKQYLVYETQGKY 121
Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220
+ ++ + E R +++G++ +AI + ++
Sbjct: 122 AAEALSIIDFAEQEEGQFFDEDGDTQDSEYHYQQEKARRMMEQGDFKSAIKLLEKLIEEK 181
Query: 221 SDAEHAEEAMARLVEAYVALALMDEAR 247
D A L AY + + A+
Sbjct: 182 PDF---WGACNNLALAYFYIGEAEMAK 205
>gi|322833962|ref|YP_004213989.1| peptidase M48 Ste24p [Rahnella sp. Y9602]
gi|321169163|gb|ADW74862.1| peptidase M48 Ste24p [Rahnella sp. Y9602]
Length = 512
Score = 36.3 bits (81), Expect = 5.0, Method: Composition-based stats.
Identities = 29/220 (13%), Positives = 55/220 (25%), Gaps = 22/220 (10%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
++ ++ + N +A Q + F A + L Q S L
Sbjct: 214 QQGMISFTQGNEQEADRIGIQVLQRSGFDPQAMPAFLQKLADQASYSTRPPEMLLTHPLP 273
Query: 122 TQYPESKNVDYVYYLVGMSYAQMIR---DVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
+ + V + + +N +
Sbjct: 274 DSRLADIRNRANQMPHPIVQSSQDYTLAKVRILGMYGSESFPLSDDYLLKLSNGNIREQL 333
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA--IPRFQLVLANYSDAEHAEEAMARL--- 233
AK+ + R L+ L N D++ A +A+ARL
Sbjct: 334 AAKYGHALQFYKAKKYDQARTILEPLLAQNPGNEWLLDLATDNDIDSKRAPQAIARLEQA 393
Query: 234 --------------VEAYVALALMDEAREVVSLIQERYPQ 259
AY+ A A ++++ YP
Sbjct: 394 GAASSANAVLQLNLANAYLEGAKPANAMKILNRYTFNYPG 433
>gi|307719874|ref|YP_003875406.1| TPR domain-containing protein [Spirochaeta thermophila DSM 6192]
gi|306533599|gb|ADN03133.1| TPR domain protein [Spirochaeta thermophila DSM 6192]
Length = 839
Score = 36.3 bits (81), Expect = 5.0, Method: Composition-based stats.
Identities = 28/191 (14%), Positives = 67/191 (35%), Gaps = 5/191 (2%)
Query: 71 QNFSKAYEYFNQCSRDFPFAGV--ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
+ +A+++F Q R P L+++ + + + + L E +
Sbjct: 263 GRYKEAFDWFVQALRIQPGYERALHNILHLLTSQEAFFDVEQELSLLLLEFPGLEQLRVS 322
Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
+ ++ A+ + ++ A + + I+ F
Sbjct: 323 YAEALFRKGDYDRAEEELHLLEEKGADDPRIPRLLGIISFLHGKEDRAHTYFEHYRRLTH 382
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
+++ + R EY AA+ R L+++ D A L E ++ L ++EA
Sbjct: 383 REDYLLDLIKTLKDRKEYRAALTRLNEYLSSHPDDR---NARLLLGEIHLELGNIEEAFP 439
Query: 249 VVSLIQERYPQ 259
++ ++E P
Sbjct: 440 LLEKMREETPS 450
>gi|254422317|ref|ZP_05036035.1| tetratricopeptide repeat domain protein [Synechococcus sp. PCC
7335]
gi|196189806|gb|EDX84770.1| tetratricopeptide repeat domain protein [Synechococcus sp. PCC
7335]
Length = 987
Score = 36.3 bits (81), Expect = 5.0, Method: Composition-based stats.
Identities = 29/217 (13%), Positives = 62/217 (28%), Gaps = 6/217 (2%)
Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
Y+K L + + + A E F Q P + M+ + A
Sbjct: 761 EAWYQKGRLLRELRQYQSALEAFEQAIEQDPIDARVWLNKGMTLSRLRKREEAIAAFDRA 820
Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT-KLMLQYMSRIVERYTNSPYVK 176
+ Y E+ V + + ++ + + +++R + Y +
Sbjct: 821 LDINPDYHEAWVNRGVAFGILQAHDKAFESFDMAVTLQANDAVAWLNRGLALTELERYEE 880
Query: 177 GARFYVTVGR--NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234
+ R +LA G ++ G + A+ F +A + +A
Sbjct: 881 AVASFEKATRFNPKLAKAWDNRGYVLMRLGRDLDALKSFDKAIAVNPNY---AKAYYNRA 937
Query: 235 EAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
Y D A E + P + + +
Sbjct: 938 LCYALQRDNDLALENLQQAVRLEPSYKQEALADEIFE 974
>gi|113475197|ref|YP_721258.1| hypothetical protein Tery_1499 [Trichodesmium erythraeum IMS101]
gi|110166245|gb|ABG50785.1| TPR repeat [Trichodesmium erythraeum IMS101]
Length = 486
Score = 36.3 bits (81), Expect = 5.0, Method: Composition-based stats.
Identities = 14/203 (6%), Positives = 35/203 (17%), Gaps = 1/203 (0%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
+ N +A + Q + + +L + E
Sbjct: 48 NLGEALSLQGNLEEAANIYYQGIQLQKNYPWSYYNLGEILIKLERFDEAVIYLRQAIELN 107
Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
+ + + + + I + + E A
Sbjct: 108 PDFSNFHHSLGLALSKKGLFDEAIVTYRRAIEIDPNAILTYQYLGEVLACKKQYDEAIES 167
Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
+ EA + + L
Sbjct: 168 FNQAIGINPYLSEYHLGLAKVLQNAGQIEKAINSCHHALELNPNLAEAYYYIGLGFTKLQ 227
Query: 242 LMDEAREV-VSLIQERYPQGYWA 263
+EA + + I +
Sbjct: 228 KWEEAIDSLLQAISLNFKNAEVY 250
>gi|298674669|ref|YP_003726419.1| hypothetical protein Metev_0722 [Methanohalobium evestigatum
Z-7303]
gi|298287657|gb|ADI73623.1| conserved hypothetical protein [Methanohalobium evestigatum
Z-7303]
Length = 313
Score = 36.3 bits (81), Expect = 5.0, Method: Composition-based stats.
Identities = 12/59 (20%), Positives = 22/59 (37%), Gaps = 4/59 (6%)
Query: 19 LYK--FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRY--QREVYEKAVLFLKEQNF 73
+ K F LTIFF +A L G +++ + ++ A F + +
Sbjct: 1 MKKWVFILTIFFILASICLSGCSENKQVKPVNETILSFLDKVNKTDFKNAHSFYEGGKY 59
>gi|238917531|ref|YP_002931048.1| hypothetical protein EUBELI_01610 [Eubacterium eligens ATCC 27750]
gi|238872891|gb|ACR72601.1| Hypothetical protein EUBELI_01610 [Eubacterium eligens ATCC 27750]
Length = 463
Score = 36.3 bits (81), Expect = 5.0, Method: Composition-based stats.
Identities = 10/43 (23%), Positives = 20/43 (46%)
Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
++ ++YVALA D+A++ I + Y + + V
Sbjct: 418 DSAYYAAKSYVALAKTDDAKKYYKYIVDDYSTSGYYKEASDYV 460
>gi|225075196|ref|ZP_03718395.1| hypothetical protein NEIFLAOT_00196 [Neisseria flavescens
NRL30031/H210]
gi|224953371|gb|EEG34580.1| hypothetical protein NEIFLAOT_00196 [Neisseria flavescens
NRL30031/H210]
Length = 251
Score = 36.3 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 26/254 (10%), Positives = 65/254 (25%), Gaps = 16/254 (6%)
Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
KF + ++ + S ++ + + AV +++ QN+ +A
Sbjct: 1 MKIKFGFALLTALTLSACASSSGPSPKERAIQVSNIKT------QLAVEYMRGQNYRQAT 54
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
E + + +A A + +A + ++ P+S V+ Y
Sbjct: 55 ESIEEALKSNSKNDLAWLV---RAEIYQYLKVKDKAQESFLKALSLKPDSAEVNNNYGWF 111
Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN-----SPYVKGARFYVTVGRNQLAAK 192
+ + + Y S + +
Sbjct: 112 LCNQMNALAESLAYFDKALADPTYPSPFIANMNKGICSARLGQYSLAQAYLERSLAANPQ 171
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV--EAYVALALMDEAREVV 250
+ + ++ Y +A L+ AL A E
Sbjct: 172 FFPAFKELARTKMMAGSLNDADYYFRQYQSKVDVLQADDLLLGWRLATALGNKHAAYEYE 231
Query: 251 SLIQERYPQGYWAR 264
+ ++ +P +
Sbjct: 232 AQLRANFPYSDELQ 245
>gi|242310515|ref|ZP_04809670.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489]
gi|239522913|gb|EEQ62779.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489]
Length = 431
Score = 36.3 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 31/269 (11%), Positives = 76/269 (28%), Gaps = 15/269 (5%)
Query: 18 QLYKFALTIFF---SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE-KAVLFLKEQNF 73
L + + I L+G + +S +V Q ++Y +A + L ++
Sbjct: 1 MLLRNKILISIVGGFCLFVLLMGCLPNAKIAFVDNSYQEVNNQEDIYIIQAYVALDMGDY 60
Query: 74 SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP-ESKNVDY 132
A E + R+ + + + A + V+
Sbjct: 61 KTARENLQKAYELTKNKEYLREIIGLLVLEKDFLKAKNAAKDYLKVSPNDEKVRQALVEI 120
Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
+ + + A + A+ L+ S + +
Sbjct: 121 LGSMGDLQGAVQEVQILLKNNASVQNLEIASSVYFLQKDYSRALEYLQKAYEINKDEKIL 180
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL----------VEAYVALAL 242
+ + + L + AI ++ + Y +++ E +A + Y L
Sbjct: 181 DKIVSIHLLFFKDRNKAIMVYETHIKKYGISKNVGEKLALIYLEDKKFLEAARNYEKLYK 240
Query: 243 MDEAREVVSLIQERYPQGYWARYVETLVK 271
++ E Y +G + E ++
Sbjct: 241 ATREQKYARFALEIYIKGQYLTKAERFLE 269
>gi|254831802|ref|ZP_05236457.1| hypothetical protein Lmon1_10635 [Listeria monocytogenes 10403S]
Length = 384
Score = 36.3 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 19/155 (12%), Positives = 41/155 (26%), Gaps = 1/155 (0%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K + + +VG + + T Q +K V +K N +
Sbjct: 1 MKKLIIVMLTIFTAVLVVGCSGTADKAETKKETTKESKQANAVKKEVKEMKS-NLENVKK 59
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+ + + A F Y + E+Y T D +
Sbjct: 60 AISDKDKSALQSSAADLHKHWLEFENNVRDLYPLQYTDVEKYETPIFYESKNDNPNFDTL 119
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
A + K S ++++ ++
Sbjct: 120 NDNATGLDGALDTLEKAKETKAKTSEVLDKAVDNY 154
>gi|78186120|ref|YP_374163.1| hypothetical protein Plut_0232 [Chlorobium luteolum DSM 273]
gi|78166022|gb|ABB23120.1| conserved hypothetical protein [Chlorobium luteolum DSM 273]
Length = 712
Score = 36.3 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 8/69 (11%), Positives = 18/69 (26%), Gaps = 9/69 (13%)
Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85
+F I L + D E+Y +A + +A + +
Sbjct: 34 LFLPIFFFILASCGSG---------IEDAGLPSELYRQAREHSHRGEYQQALGCYARGLE 84
Query: 86 DFPFAGVAR 94
+ +
Sbjct: 85 GENLSEPSF 93
>gi|146276616|ref|YP_001166775.1| hypothetical protein Rsph17025_0564 [Rhodobacter sphaeroides ATCC
17025]
gi|145554857|gb|ABP69470.1| conserved hypothetical protein [Rhodobacter sphaeroides ATCC 17025]
Length = 274
Score = 36.3 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 28/79 (35%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
G + GE A + + D A EA+ +L A L EA ++
Sbjct: 191 HYLRGEALRQLGETANAARAYLESFSGDPDGPRAPEALLKLGRALGDLRQTPEACVTLAE 250
Query: 253 IQERYPQGYWARYVETLVK 271
+ R+P A T ++
Sbjct: 251 VGTRFPGSPSAAEAATAMQ 269
>gi|116749875|ref|YP_846562.1| TPR repeat-containing protein [Syntrophobacter fumaroxidans MPOB]
gi|116698939|gb|ABK18127.1| Tetratricopeptide TPR_2 repeat protein [Syntrophobacter
fumaroxidans MPOB]
Length = 318
Score = 36.3 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 11/67 (16%), Positives = 22/67 (32%), Gaps = 3/67 (4%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+R A+ ++ + +A L Y MDEA ++
Sbjct: 60 HYNRAVEQHRRNRLPEAVEGYRQAIRQNPGDP---KAQFNLAVIYQDQGRMDEAGKIYRE 116
Query: 253 IQERYPQ 259
+ +R+P
Sbjct: 117 LVDRHPD 123
>gi|332559127|ref|ZP_08413449.1| tol-pal system protein YbgF [Rhodobacter sphaeroides WS8N]
gi|332276839|gb|EGJ22154.1| tol-pal system protein YbgF [Rhodobacter sphaeroides WS8N]
Length = 274
Score = 36.3 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 14/64 (21%), Positives = 24/64 (37%)
Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
A + + D A EA+ +L A L EA ++ + R+P A
Sbjct: 206 NAARAYLESFSGDPDGPRAPEALLKLGRALGDLRQTPEACVTLAEVGTRFPGSPSAAEAA 265
Query: 268 TLVK 271
T ++
Sbjct: 266 TTMQ 269
>gi|282897473|ref|ZP_06305475.1| TPR repeat protein [Raphidiopsis brookii D9]
gi|281198125|gb|EFA73019.1| TPR repeat protein [Raphidiopsis brookii D9]
Length = 548
Score = 36.3 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 19/209 (9%), Positives = 54/209 (25%), Gaps = 17/209 (8%)
Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
Y+ + + + ++ A +NQ +A + A
Sbjct: 300 AYYKLGLAYYQLGDYDMAISNYNQVINANVN--------------HSNAYNKRGLAHYKS 345
Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
E + + + Y + ++ S+++ + +
Sbjct: 346 RNYHSAIEDFSQAISINPELAINYKNRAEARYLIGDYQGAIEDYSQVLSIHPDLLDQPIL 405
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
+ N EV + + + + +A + + Y
Sbjct: 406 VGDIGELFNIKCHDEVIYKNRADHLYQLGEYEEAVENYNQAIALNINYVDAYYQRGKIYF 465
Query: 239 ALALMDEAREVVSLIQE---RYPQGYWAR 264
+ + A + S++ + Y Y+ R
Sbjct: 466 NRGIYEAAVDDFSMVIKTQPNYGDAYYYR 494
>gi|225444762|ref|XP_002279485.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 1064
Score = 36.3 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 32/198 (16%), Positives = 60/198 (30%), Gaps = 12/198 (6%)
Query: 59 EVYEKAVLFLKEQNFSKA-----YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
++Y++A+ + A E A +Q + Y
Sbjct: 183 DLYKRALQVYP--DCPAALDPENVEALVALGIMDLHTNDASGIRKGMEKMQRAFEIYPYC 240
Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
A + + V L + A L Y S+
Sbjct: 241 AMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYEKAGLY 300
Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
Y+ + L +G+ LK G++ +++ F+ VL Y + EA+ L
Sbjct: 301 YMASVKESNKPHDFVLPYYG--LGQVQLKLGDFRSSLSNFEKVLEVYPE---NCEALKAL 355
Query: 234 VEAYVALALMDEAREVVS 251
YV L ++A+E +
Sbjct: 356 GHIYVQLGQTEKAQEYLR 373
>gi|221640122|ref|YP_002526384.1| hypothetical protein RSKD131_2023 [Rhodobacter sphaeroides KD131]
gi|221160903|gb|ACM01883.1| Hypothetical Protein RSKD131_2023 [Rhodobacter sphaeroides KD131]
Length = 274
Score = 36.3 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 14/64 (21%), Positives = 24/64 (37%)
Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
A + + D A EA+ +L A L EA ++ + R+P A
Sbjct: 206 NAARAYLESFSGDPDGPRAPEALLKLGRALGDLRQTPEACVTLAEVGTRFPGSPSAAEAA 265
Query: 268 TLVK 271
T ++
Sbjct: 266 TTMQ 269
>gi|218235835|ref|YP_002369787.1| putative ABC transporter, substrate-binding protein [Bacillus
cereus B4264]
gi|218163792|gb|ACK63784.1| putative ABC transporter, substrate-binding protein [Bacillus
cereus B4264]
Length = 270
Score = 36.3 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 11/70 (15%), Positives = 21/70 (30%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K LT S ++ L + + L + EKA L+++ +
Sbjct: 1 MKKLLLTALISTSIFGLAACGGKDKDEKKLVVGASNVPHAVILEKAKPLLEKKGIELEIK 60
Query: 79 YFNQCSRDFP 88
F
Sbjct: 61 KFQDYVLPNK 70
>gi|328858563|gb|EGG07675.1| hypothetical protein MELLADRAFT_48050 [Melampsora larici-populina
98AG31]
Length = 491
Score = 36.3 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 27/234 (11%), Positives = 56/234 (23%), Gaps = 9/234 (3%)
Query: 27 FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVY---EKAVLFLKEQNFSKAYEYFNQC 83
FF I + + +Y ++A++ ++F A F+
Sbjct: 135 FFFIHATLESHTSGNGEVLTKVIEELQELFPTSIYLKSQQALMAYHLRDFDVAETIFDSI 194
Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
+ P + +V K A + V L+G ++
Sbjct: 195 YAEDPHRVEDVDTYSNILYVMEKRAKLTSLAQNYAGGADGAGVDRMRPEVCCLLGNYWSL 254
Query: 144 MIRDVPYDQRATKLMLQYMSRI--VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
+ + S + + + + + R +
Sbjct: 255 SGEHEKAIVEFRRALRLDPSYLSAWTLMGHEYVEMKNTYAAIESYRKAIDANSKDYRAWY 314
Query: 202 KRGEYVAAIPRFQLVLANYSDA----EHAEEAMARLVEAYVALALMDEAREVVS 251
G+ + L Y A + L + Y L EAR
Sbjct: 315 GLGQTYEVLDMLSYALYYYQQATALKPYDTRMWLALAQVYEKLGRRREARMTTK 368
>gi|260467068|ref|ZP_05813248.1| tol-pal system protein YbgF [Mesorhizobium opportunistum WSM2075]
gi|259029177|gb|EEW30473.1| tol-pal system protein YbgF [Mesorhizobium opportunistum WSM2075]
Length = 368
Score = 36.3 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 17/82 (20%), Positives = 29/82 (35%)
Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
+ A +G L + ++ A F +Y A+ A + + +L +
Sbjct: 269 DHISRFPRDAKTADAHYWLGESLLGQQKFRDAAEVFLAASKDYPKAKKAPDMLLKLGVSL 328
Query: 238 VALALMDEAREVVSLIQERYPQ 259
V L D A I +RYP
Sbjct: 329 VGLKQHDVACATFGEIGKRYPD 350
>gi|298491818|ref|YP_003721995.1| TPR repeat-containing protein ['Nostoc azollae' 0708]
gi|298233736|gb|ADI64872.1| TPR repeat-containing protein ['Nostoc azollae' 0708]
Length = 731
Score = 36.3 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 24/225 (10%), Positives = 59/225 (26%), Gaps = 19/225 (8%)
Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV-------- 103
TD + Y++ +++++ +A E F Q + + + +
Sbjct: 454 TDSLTFIDYYDRGNEAYQKRDYEQAIENFTQGIKKKSTFSKFYINRGNARYNLNDYEGAL 513
Query: 104 -QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
Y+ + DY + + Y+
Sbjct: 514 ADYNQALKINPQEVKALVNRGNAYYMLADYSSDPEQEYQKAINNFNTAIHINVRDTEAYI 573
Query: 163 SRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS- 221
R + R + Y + + A +F +NY+
Sbjct: 574 RRGIVRSQMAKYSSNYQHEYQKSIADFTEAIKLNTSKAEAYFQRGLARYQFAQYSSNYAR 633
Query: 222 -------DAEHAEEAMARLVEAYVALAL--MDEAREVVSLIQERY 257
D A R+ + Y+ + + A+ + +Q+ +
Sbjct: 634 EYKQAIVDFTQAININPRMAKVYLKRGMVHYELAQYGENTVQQNH 678
>gi|209733600|gb|ACI67669.1| Mitochondrial fission 1 protein [Salmo salar]
Length = 155
Score = 36.3 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 13/83 (15%), Positives = 26/83 (31%)
Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
+ E K + L N + A + + L A L ++A
Sbjct: 32 KETKFEYAWCLTRSKYSGDIKKGIVLLEDLVNKGSKDDARDFLFYLAVANYRLKDYEKAL 91
Query: 248 EVVSLIQERYPQGYWARYVETLV 270
+ + + + P A +E L+
Sbjct: 92 KYIRTLLKNEPGNKQALELEKLI 114
>gi|209523076|ref|ZP_03271633.1| sulfotransferase [Arthrospira maxima CS-328]
gi|209496663|gb|EDZ96961.1| sulfotransferase [Arthrospira maxima CS-328]
Length = 622
Score = 36.3 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 26/227 (11%), Positives = 73/227 (32%), Gaps = 13/227 (5%)
Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAY-------EYFNQCSRDFPFAGVARKSLLMSAFVQ 104
+++++A++++ +++ A + + + G+A + +
Sbjct: 19 PPKLLALQLHQQAIMYINNRDWESAIQAGEQALKLYPDLAIACKTLGIAWQCKGELTEAE 78
Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
+ E + + +Y ++ P A + + + +
Sbjct: 79 KWYKQALTIKPNFAEVYSNLGSLYAKQSQWQPAITAYKTALKINPNLAGAYRNLAKVWTE 138
Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
+ T++ + A +++G +LK ++ AI ++ + Y D
Sbjct: 139 L--EDTDNFMKCQYKALQLEPEKGSADDYIKLGNLFLKCRQFTKAIACYRQAIKLYPDTS 196
Query: 225 HAEEAMARLVEAYVALALMDEA-REVVSLIQERYPQGYWARYVETLV 270
EA L E AL +A ++ R +E ++
Sbjct: 197 ---EAYHNLGEVLKALKRPKQAILSYQKALKVNPQSTMTYRSLEKIL 240
>gi|168214778|ref|ZP_02640403.1| tetratricopeptide repeat protein [Clostridium perfringens CPE str.
F4969]
gi|170713792|gb|EDT25974.1| tetratricopeptide repeat protein [Clostridium perfringens CPE str.
F4969]
Length = 475
Score = 36.3 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 35/110 (31%), Gaps = 6/110 (5%)
Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS----- 221
++Y ++ + + +G Y + AI FQ L +Y
Sbjct: 362 KKYEDALKDFEKAYAFSSDSYLRPHLIYFMGTSYENLDKNTEAIKYFQEYLKDYKAKPDA 421
Query: 222 -DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
D + + + L Y E+++ I+ YP + V +
Sbjct: 422 EDFMYTPQCLYNLAILYNKEGNSAESKKYAQEIENDYPNTMFYNDVTKKI 471
>gi|118381790|ref|XP_001024055.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89305822|gb|EAS03810.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 376
Score = 36.3 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 19/190 (10%), Positives = 47/190 (24%)
Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
+Y +++ E ++ +A + P A SL F Q
Sbjct: 158 ALYNLGLIYQNEGHYQEARRCYLITLDINPQFYQAYISLGCIYFSLGMLEDAQNYCEKAL 217
Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
+ + ++ Y + + + + Q + + Y ++ A
Sbjct: 218 QINNKSLDAHLNLAFIYDSKDMIEEARQSYEQVLQINPKLYQAQNNLGLIYRKKEMLEEA 277
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
+ + Q + ++A L Y
Sbjct: 278 KVCYEKSIQINDQYYQAYYNLSSIYYDQGNIQEAKQCLEKAIKINPLYDQAHYNLGLIYY 337
Query: 239 ALALMDEARE 248
++EA+
Sbjct: 338 NQGELEEAKR 347
>gi|116626285|ref|YP_828441.1| hypothetical protein Acid_7245 [Candidatus Solibacter usitatus
Ellin6076]
gi|116229447|gb|ABJ88156.1| hypothetical protein Acid_7245 [Candidatus Solibacter usitatus
Ellin6076]
Length = 554
Score = 36.3 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 9/48 (18%), Positives = 19/48 (39%)
Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
++ A+ A+ A L DE ++ ++ R+ W + L
Sbjct: 214 NSPRADGALYWKAYALGKLGKRDEGLAAIAELRSRFASSRWLDDAKAL 261
>gi|317127239|ref|YP_004093521.1| hypothetical protein Bcell_0508 [Bacillus cellulosilyticus DSM
2522]
gi|315472187|gb|ADU28790.1| hypothetical protein Bcell_0508 [Bacillus cellulosilyticus DSM
2522]
Length = 160
Score = 36.3 bits (81), Expect = 5.2, Method: Composition-based stats.
Identities = 10/64 (15%), Positives = 19/64 (29%), Gaps = 3/64 (4%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K L S+ + G + V Y L+++N+ +A
Sbjct: 1 MKKVLLFCLVSVLIVLSTGCFGTGEESSTKEIDDPVEAAVYYY---YDSLQKENYDEALS 57
Query: 79 YFNQ 82
Y
Sbjct: 58 YLAS 61
>gi|237746317|ref|ZP_04576797.1| TPR repeat-containing protein [Oxalobacter formigenes HOxBLS]
gi|229377668|gb|EEO27759.1| TPR repeat-containing protein [Oxalobacter formigenes HOxBLS]
Length = 302
Score = 36.3 bits (81), Expect = 5.2, Method: Composition-based stats.
Identities = 19/117 (16%), Positives = 38/117 (32%), Gaps = 1/117 (0%)
Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQ-NFSKA 76
K L I L + + ++D+ + YQ++ Y KA+ LK+ + A
Sbjct: 1 MPRKTFLLISLIALFFSLTACQSEKAKDIPAEKKGVEYYQQKKYRKALPLLKKSADSGNA 60
Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
+ GV + + + +A + A L + + D
Sbjct: 61 AALYYLGLMHRQGNGVEKSAGKACQYFLKAAEGGYKEAYLAAGLCYRKGNGFSRDDR 117
>gi|261380197|ref|ZP_05984770.1| type IV pilus biogenesis/stability protein PilW [Neisseria subflava
NJ9703]
gi|284797046|gb|EFC52393.1| type IV pilus biogenesis/stability protein PilW [Neisseria subflava
NJ9703]
Length = 251
Score = 36.3 bits (81), Expect = 5.2, Method: Composition-based stats.
Identities = 26/254 (10%), Positives = 63/254 (24%), Gaps = 16/254 (6%)
Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
KF + ++ + S ++ + + AV +++ QN+ +A
Sbjct: 1 MKIKFGFALLTALTLSACASSSGPSPKERAIQVSNIKT------QLAVEYMRGQNYRQAT 54
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
E + + +A A + +A + ++ P+S V+ Y
Sbjct: 55 ESIEEALKSNSKNDLAWLV---RAEIYQYLKVKDKAQESFLKALSLKPDSAEVNNNYGWF 111
Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN-----SPYVKGARFYVTVGRNQLAAK 192
+ + Y S + +
Sbjct: 112 LCNQMNAPAESLAYFDKALADPTYPSPFIANMNKGICSARLGQYSLAQAYLERSLAANPQ 171
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV--EAYVALALMDEAREVV 250
+ + + Y +A L+ AL A E
Sbjct: 172 FFPAFKELARTKMMAGNLNDADYYFRQYQSKVDVLQADDLLLGWRLATALGNKHAAYEYE 231
Query: 251 SLIQERYPQGYWAR 264
+ ++ +P +
Sbjct: 232 AQLRANFPYSDELQ 245
>gi|169342370|ref|ZP_02863436.1| tetratricopeptide repeat protein [Clostridium perfringens C str.
JGS1495]
gi|169299490|gb|EDS81554.1| tetratricopeptide repeat protein [Clostridium perfringens C str.
JGS1495]
Length = 481
Score = 36.3 bits (81), Expect = 5.2, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 35/110 (31%), Gaps = 6/110 (5%)
Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS----- 221
++Y ++ + + +G Y + AI FQ L +Y
Sbjct: 368 KKYEDALKDFEKAYAFSSDSYLRPHLIYFMGTSYENLDKNTEAIKYFQEYLKDYKAKPDA 427
Query: 222 -DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
D + + + L Y E+++ I+ YP + V +
Sbjct: 428 EDFMYTPQCLYNLAILYNKEGNSAESKKYAQEIENDYPNTMFYNDVTKKI 477
>gi|332706150|ref|ZP_08426220.1| hypothetical protein LYNGBM3L_15000 [Lyngbya majuscula 3L]
gi|332355086|gb|EGJ34556.1| hypothetical protein LYNGBM3L_15000 [Lyngbya majuscula 3L]
Length = 1758
Score = 36.3 bits (81), Expect = 5.2, Method: Composition-based stats.
Identities = 15/190 (7%), Positives = 46/190 (24%), Gaps = 10/190 (5%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
+++ K++ + +A Y+ Q + + K + Y
Sbjct: 343 NIGLVYYKQEQYDQAINYYQQALAIHRELKNQLQEWKTLVNIGQVYYKQGKYQQTINYYQ 402
Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
SK ++ + + + + + ++ R + +
Sbjct: 403 RALAISKKIENPTGKGANLWGIGQAYYAWGKPGQAIDYYQQALVIFRKIKNYSHQVNILG 462
Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
+ Y + I + A+ + + Y +
Sbjct: 463 ALGLAQIRQGNYEKARDSYQQVLALARQIKDRSEEIT----------ALNFIGQVYESQG 512
Query: 242 LMDEAREVVS 251
D+A +
Sbjct: 513 KYDQALDYYQ 522
>gi|299538577|ref|ZP_07051860.1| hypothetical protein BFZC1_21303 [Lysinibacillus fusiformis ZC1]
gi|298726164|gb|EFI66756.1| hypothetical protein BFZC1_21303 [Lysinibacillus fusiformis ZC1]
Length = 422
Score = 36.3 bits (81), Expect = 5.2, Method: Composition-based stats.
Identities = 27/235 (11%), Positives = 63/235 (26%), Gaps = 1/235 (0%)
Query: 36 VGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
G +++ D Y+ ++ D ++ A + Q + A + + P A
Sbjct: 185 AGAAYETAFDYYVKALEDEVKPDILFGAAYSAFQSQKYEMAIKQLEELKELDPDYFSAYL 244
Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
L S + K A G + L + + +
Sbjct: 245 LLAESYAMTEDNQKAYAAIQEGLKRDEYDKSLYLFAGKMALKNGLPEEAEQHLREAIALD 304
Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
++ + ++ + + + ++
Sbjct: 305 PEYMEAVLALISVFGQQERHEDVIELFETLQQNDFEWSTLYPFAAEAYENLELYDRAYEF 364
Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG-YWARYVETL 269
Y+D + + + V + EA+EV+ + P W +ETL
Sbjct: 365 YRLAYNDFKEDATFLEKYVYFLLEEGKRSEAKEVLGQLINIQPGEPEWQEKLETL 419
>gi|329116604|ref|ZP_08245321.1| tetratricopeptide repeat protein [Streptococcus parauberis NCFD
2020]
gi|326907009|gb|EGE53923.1| tetratricopeptide repeat protein [Streptococcus parauberis NCFD
2020]
Length = 410
Score = 35.9 bits (80), Expect = 5.3, Method: Composition-based stats.
Identities = 27/225 (12%), Positives = 68/225 (30%), Gaps = 5/225 (2%)
Query: 36 VGWERQSSRDVYLDSVTDVRYQRE-VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR 94
+ + +L+ ++ Y+ E +YE A L + + KA YF Q P
Sbjct: 178 ASLGKFEAAIEFLEKTVEIEYEDESLYELATLLYDQGEYQKANLYFKQLETMNPDFPGYE 237
Query: 95 KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
S ++ + + P+ + + + + +
Sbjct: 238 YVYAQSLHAEHKTDQALRLTQQALRKNQFDPQLLLLASQFAFESHDISSAESYLLKAKEI 297
Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
+ + + R+ Y ++ + + +K + + Y A +Q
Sbjct: 298 SVDDDEVLMRLSNLYIDAQRFADVINLKLEESDNVLSK-WNLAKGYQGLDREEEAFEIYQ 356
Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
+ ++ D E ++ V +AR++ + P
Sbjct: 357 ELESDLKD---NPEFLSDYVLILREFGNGQKARQMAESYLKLVPD 398
>gi|262196499|ref|YP_003267708.1| hypothetical protein Hoch_3313 [Haliangium ochraceum DSM 14365]
gi|262079846|gb|ACY15815.1| conserved hypothetical protein [Haliangium ochraceum DSM 14365]
Length = 325
Score = 35.9 bits (80), Expect = 5.3, Method: Composition-based stats.
Identities = 12/58 (20%), Positives = 21/58 (36%)
Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
++ L + + AEEA + EAY AL + + +P A +
Sbjct: 260 YRDALRSERNRALAEEARYGVAEAYRALGQRASEQRALEEFLAHHPDSPLAAASRRRL 317
>gi|218461258|ref|ZP_03501349.1| hypothetical protein RetlK5_17827 [Rhizobium etli Kim 5]
Length = 110
Score = 35.9 bits (80), Expect = 5.3, Method: Composition-based stats.
Identities = 16/67 (23%), Positives = 27/67 (40%), Gaps = 2/67 (2%)
Query: 205 EYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
+Y A F +A Y + A +A L EA + +EA + ++Y +
Sbjct: 1 DYGTAEQEFNQYIARYPSSARAADANFWLGEALYSQGKYNEAAKTFLNAHQKYGSSE--K 58
Query: 265 YVETLVK 271
E L+K
Sbjct: 59 APEMLLK 65
>gi|329766859|ref|ZP_08258387.1| hypothetical protein HMPREF0428_00084 [Gemella haemolysans M341]
gi|328837584|gb|EGF87209.1| hypothetical protein HMPREF0428_00084 [Gemella haemolysans M341]
Length = 294
Score = 35.9 bits (80), Expect = 5.3, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYL 48
+ K LTIF + V L+G ++SS
Sbjct: 1 MKKILLTIFSFLLVFSLIGCSQKSSTKEEK 30
>gi|319940887|ref|ZP_08015226.1| hypothetical protein HMPREF9464_00445 [Sutterella wadsworthensis
3_1_45B]
gi|319805769|gb|EFW02550.1| hypothetical protein HMPREF9464_00445 [Sutterella wadsworthensis
3_1_45B]
Length = 248
Score = 35.9 bits (80), Expect = 5.3, Method: Composition-based stats.
Identities = 15/134 (11%), Positives = 44/134 (32%), Gaps = 8/134 (5%)
Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
+++ Y+ AV L+ + A + F + +F + +L ++ Y+ A S
Sbjct: 123 EEKKAYDTAVALLQTGKYGDAEKAFKDFNDNFKKSPYRMDALFWWGTSAFANEHYKTAIS 182
Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
+ + ++ + ++ + + +I++ Y +
Sbjct: 183 SQNQLLREFSKGARAADAMM--------LVASSQAASGSINAAKATLQKIIKTYPKTDVA 234
Query: 176 KGARFYVTVGRNQL 189
K A + +
Sbjct: 235 KEAAQRIREFDQKK 248
>gi|195430888|ref|XP_002063480.1| GK21381 [Drosophila willistoni]
gi|194159565|gb|EDW74466.1| GK21381 [Drosophila willistoni]
Length = 1059
Score = 35.9 bits (80), Expect = 5.3, Method: Composition-based stats.
Identities = 18/205 (8%), Positives = 43/205 (20%), Gaps = 9/205 (4%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
A + ++ A + + + P R L + + E
Sbjct: 154 NLAAALVAARDMEAAVQAYITALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETC 213
Query: 122 ---TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
+ + + +++ A
Sbjct: 214 PNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAA 273
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
A + Y ++G AI ++ + + +A L A
Sbjct: 274 YLRALNLSPNNAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPNFP---DAYCNLANALK 330
Query: 239 ALALMDEARE---VVSLIQERYPQG 260
+ EA E + +
Sbjct: 331 EKGQVKEAEECYNTALRLCSNHADS 355
>gi|157074098|ref|NP_001096761.1| prolyl 3-hydroxylase 1 [Bos taurus]
gi|133778097|gb|AAI23439.1| LOC539976 protein [Bos taurus]
gi|296488921|gb|DAA31034.1| prolyl 3-hydroxylase 1 [Bos taurus]
Length = 736
Score = 35.9 bits (80), Expect = 5.3, Method: Composition-based stats.
Identities = 25/227 (11%), Positives = 47/227 (20%), Gaps = 14/227 (6%)
Query: 35 LVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR 94
+G S L+ R + A + K KA + P R
Sbjct: 123 CLGPSTAHSLSEELELEFRKRSPYNYLQVA--YFKINKLEKAVAAAHTFFVGNPEHMEMR 180
Query: 95 KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
++L + + + + + + +
Sbjct: 181 QNLDYYQTMSGVKEADFKDLEAKPHMHEFRLGVRLYSEEQPQEAVPHLEAALREYFVAAE 240
Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
L + Y Y +T Q+ + + F
Sbjct: 241 ECRALCEGPYDYDGYNYLEYNADLFQAITDHYIQVLSCKQNCVTELASHPSREKPFEDFL 300
Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
NY L AY + +A E +P
Sbjct: 301 PSHYNY------------LQFAYYNIGNYTQAIECAKTYLLFFPNDE 335
>gi|113475191|ref|YP_721252.1| glycosyl transferase family protein [Trichodesmium erythraeum
IMS101]
gi|110166239|gb|ABG50779.1| glycosyl transferase, family 2 [Trichodesmium erythraeum IMS101]
Length = 1737
Score = 35.9 bits (80), Expect = 5.3, Method: Composition-based stats.
Identities = 23/207 (11%), Positives = 55/207 (26%), Gaps = 7/207 (3%)
Query: 59 EVY-EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
E+Y +++ +A F + P + +A ++L ++ Q +
Sbjct: 115 ELYISLGSALVQKGLLYEAIANFQKAISLEPESSIAHQNLGVALEKQGQIEEGIICYRKA 174
Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG 177
E + E + + Q + + E
Sbjct: 175 IEIDPGFWEGYQKLGIALTKQGEFHQAAKIYLKACQIIPNSATVYHHYGETLAKLRRWDE 234
Query: 178 ARFYVTVGRNQLAAK---EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234
A A + G ++ ++ AI ++ + ++ + L
Sbjct: 235 AIAAYRQAIKLEANSPVIYHQFGYVLTQKQQWEEAISAYRQAIKIKPNSP---DVYHHLG 291
Query: 235 EAYVALALMDEAREVVSLIQERYPQGY 261
+A +EA + E P
Sbjct: 292 DALTQQQNWEEAVGAYRKVTELQPNSP 318
>gi|30023025|ref|NP_834656.1| ABC transporter substrate-binding protein [Bacillus cereus ATCC
14579]
gi|29898585|gb|AAP11857.1| ABC transporter substrate-binding protein [Bacillus cereus ATCC
14579]
Length = 270
Score = 35.9 bits (80), Expect = 5.3, Method: Composition-based stats.
Identities = 11/70 (15%), Positives = 21/70 (30%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K LT S ++ L + + L + EKA L+++ +
Sbjct: 1 MKKLLLTALISTSIFGLAACGGKDKDEKKLVVGASNVPHAVILEKAKPLLEKKGIELEIK 60
Query: 79 YFNQCSRDFP 88
F
Sbjct: 61 KFQDYVLPNK 70
>gi|328948519|ref|YP_004365856.1| hypothetical protein Tresu_1662 [Treponema succinifaciens DSM 2489]
gi|328448843|gb|AEB14559.1| Tetratricopeptide TPR_1 repeat-containing protein [Treponema
succinifaciens DSM 2489]
Length = 711
Score = 35.9 bits (80), Expect = 5.4, Method: Composition-based stats.
Identities = 23/255 (9%), Positives = 63/255 (24%), Gaps = 19/255 (7%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + F + + + + + E++ +A ++ + A +
Sbjct: 1 MKRNIFHSFTLAFLLLIFAYPLCAQKK----------SALELFNQAQELQQQSRWFDAVD 50
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+ + P G A +L + + S Q A +Y + + +N+ + +
Sbjct: 51 LYQEALLLNPQYGDALYNLALCHYALGSYDLSVQYADEASKYARNFSDIQNLKGLSLISL 110
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
+ + + + E + A + A+ +
Sbjct: 111 GRVNEAKDVFSQILKKYPNDVNARFGLAELDLLDGRLTVAESRYQDALKRDASNRKALLS 170
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS---LIQE 255
L E + S E A + LI
Sbjct: 171 LALVSAEMGKPEVSENYIRQALSFYSGEPEVHYMAAYLSAKNGDYKTAEQRARSAVLING 230
Query: 256 RYPQGYWARYVETLV 270
+ +++
Sbjct: 231 NF------DKAYSIL 239
>gi|325474967|gb|EGC78153.1| TPR domain-containing protein [Treponema denticola F0402]
Length = 226
Score = 35.9 bits (80), Expect = 5.4, Method: Composition-based stats.
Identities = 16/205 (7%), Positives = 48/205 (23%), Gaps = 5/205 (2%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
++ V ++++ +A +F S + + + + + S +
Sbjct: 6 KEGVNLYNKKDYQEALVFFLSVSTEDVLIKIEINYYIGLIYSRLSEYEQALEYLEQVVTA 65
Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
++ + + R ++ ++ Y
Sbjct: 66 SKDIAKVYQCRLILAFIYANTGRTRLAEFELSKLIEAGYESVQVFSSLAYVYYEHHETEK 125
Query: 182 VTVGRNQ-----LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
+ G Y+ L + +
Sbjct: 126 AIEYYEKALKTAPENSTALNGLAYILAETDRDLTRSLLLCKKAVEKQPENPAYLDSMALI 185
Query: 237 YVALALMDEAREVVSLIQERYPQGY 261
Y + L EA+ ++ +E+ P
Sbjct: 186 YHKMNLPSEAKSYITRAKEKLPDNK 210
>gi|321463604|gb|EFX74619.1| hypothetical protein DAPPUDRAFT_324191 [Daphnia pulex]
Length = 1043
Score = 35.9 bits (80), Expect = 5.4, Method: Composition-based stats.
Identities = 17/190 (8%), Positives = 41/190 (21%), Gaps = 6/190 (3%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
A + + A + + + P R L + + E
Sbjct: 130 NLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLDEAKACYLKAIETR 189
Query: 122 TQY---PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
+ + + + +++ A
Sbjct: 190 GDFAVAWSNLGCVFNAQGDIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAA 249
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
A + Y ++G AI ++ + H +A L A
Sbjct: 250 YLRALNLSPNHAVVHGNMACVYYEQGLIDLAIDTYRRAIELQP---HFPDAYCNLANALK 306
Query: 239 ALALMDEARE 248
+ +A +
Sbjct: 307 EKGQVQDAED 316
>gi|221123791|ref|XP_002167115.1| PREDICTED: similar to zinc finger, BED-type containing 4 [Hydra
magnipapillata]
Length = 2263
Score = 35.9 bits (80), Expect = 5.4, Method: Composition-based stats.
Identities = 18/215 (8%), Positives = 50/215 (23%), Gaps = 4/215 (1%)
Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF---NQCSRDFPFAGVARKS 96
S + ++ ++F + + +A + + + +
Sbjct: 1216 SLSIKKLFYKDEPHSDIASIYNNLGLVFGANEQYDQAIKCYKKSKKIYQLVYKNEPHPYV 1275
Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
+ + Q + Y K ++ + Y +
Sbjct: 1276 ADVMNNLGIIYKSNLQYDQAIKYYRESLNIYKFFYQSDLNQSVADIYNNLGLFYIAKNDN 1335
Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
+ N Y + N L + + +I +LV
Sbjct: 1336 DTALKYCNLSFEIYNRIYQDKPHPNIAYSLNNLGLVYWAKEHFDNAINYFKESIKMKKLV 1395
Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
+ + +++ L Y + +A E
Sbjct: 1396 YQD-KNHPSVADSLNNLGSVYRNIGQCSKAMEYYK 1429
>gi|75330646|sp|Q8RVB2|SPY_SOLLC RecName: Full=Probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SPINDLY; Short=LeSPY
gi|19913115|emb|CAC85168.1| SPY protein [Solanum lycopersicum]
gi|19913117|emb|CAC85169.1| SPY protein [Solanum lycopersicum]
Length = 931
Score = 35.9 bits (80), Expect = 5.4, Method: Composition-based stats.
Identities = 28/226 (12%), Positives = 54/226 (23%), Gaps = 15/226 (6%)
Query: 48 LDSVTDVRYQR-EVY-EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV-- 103
+ R E Y V+F + A + +C P +A+ ++ ++
Sbjct: 214 YEKAALERPMYAEAYCNMGVIFKNRGDLESAIACYERCLAVSPNFEIAKNNMAIALTDLG 273
Query: 104 --------QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
Y + A + + V Y L +
Sbjct: 274 TKVKLEGDINQGVAYYKKALCYNWHYADAMYNLGVAYGEMLKFDMAIVFYELAFHFNPHC 333
Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
+ I + N + + +G Y +G+ AA +
Sbjct: 334 AEACNNLGVIYKDRDNLDKAVECYQLALSIKPNFSQSLNNLGVVYTVQGKMDAAASMIEK 393
Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
+ EA L Y + A E + P
Sbjct: 394 AIIANPTY---AEAYNNLGVLYRDAGNISLAIEAYEQCLKIDPDSR 436
>gi|332260276|ref|XP_003279213.1| PREDICTED: intraflagellar transport protein 88 homolog isoform 2
[Nomascus leucogenys]
Length = 832
Score = 35.9 bits (80), Expect = 5.4, Method: Composition-based stats.
Identities = 21/193 (10%), Positives = 54/193 (27%), Gaps = 7/193 (3%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
KAV +L+++++++A E + A + L + + + +
Sbjct: 429 NKAVTYLRQKDYNQAVEILKMLEKKDSRVKSAAATNLSALYYMGKDFAQASSYADIAVNS 488
Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVP----YDQRATKLMLQYMSRIVERYTNSPYVKG 177
+Y + + + + + + + L + E+
Sbjct: 489 DRYNPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNRLDEALD 548
Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
+ A +I Y AI V++ +++L E Y
Sbjct: 549 CFLKLHAILRNSAEVLYQIANIYELMENPSQAIEWLMQVVSVIPTDPQV---LSKLGELY 605
Query: 238 VALALMDEAREVV 250
+A +
Sbjct: 606 DREGDKSQAFQYY 618
>gi|308272099|emb|CBX28707.1| hypothetical protein N47_G40310 [uncultured Desulfobacterium sp.]
Length = 255
Score = 35.9 bits (80), Expect = 5.4, Method: Composition-based stats.
Identities = 24/255 (9%), Positives = 60/255 (23%), Gaps = 15/255 (5%)
Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
K+ + I + + ++ DV ++ + +++ A
Sbjct: 1 MNKKWMVFIVTATISILFISCADNKLLKRQGEARRDV---------GEAYMNQNDYTAAL 51
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAG----KYQQAASLGEEYITQYPESKNVDYV 133
+ + +P L + + +++A L +Y
Sbjct: 52 NELLEAEKLYPNDHHLHNDLGLVYMAKDRLQLAVDHFKKAIELKPDYAPAINNLGTAYLA 111
Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
+ + + AT N + + + +
Sbjct: 112 LKDWNSAISCFEKVYKNLLYATPHYPLTNLGWAYYNKNDFALAEKYYKQALKIEPNYSIA 171
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+ + + Y + E L +AY L D+A E I
Sbjct: 172 LHGLGLTYLKMGNAPEAVIYLEKAMKY--SPWVPERYFDLAKAYEKLEQYDKAIECYYNI 229
Query: 254 QERYPQGYWARYVET 268
+ + E
Sbjct: 230 IKISQNNDLSLQAEK 244
>gi|297461632|ref|XP_617836.5| PREDICTED: tetratricopeptide repeat domain 28, partial [Bos taurus]
Length = 2322
Score = 35.9 bits (80), Expect = 5.4, Method: Composition-based stats.
Identities = 25/203 (12%), Positives = 56/203 (27%), Gaps = 12/203 (5%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
S ++ RE+ +++ +F A + Q + + K A+ +
Sbjct: 191 SKDELSEARELGNMGAVYIAMGDFENAVQCHEQHLKIAK--DLGNKREEARAYSNLGSAY 248
Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
+ + Y + + + M + + + QY + +
Sbjct: 249 HYRRNFDKAMSYHNYVLELAQELMEKAIEMRAYAGLGHAARCMQDLERAKQYHEQQLGIA 308
Query: 170 TN-SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
+ R +G + + K +A SD
Sbjct: 309 EDLKDRAAEGRASSNLGIIHQMKGDYDTALKLHKTHLCIAQEL---------SDYAAQGR 359
Query: 229 AMARLVEAYVALALMDEAREVVS 251
A + AY AL + D+A +
Sbjct: 360 AYGNMGNAYNALGMYDQAVKYHR 382
>gi|288819196|ref|YP_003433544.1| hypothetical protein HTH_1899 [Hydrogenobacter thermophilus TK-6]
gi|288788596|dbj|BAI70343.1| hypothetical protein HTH_1899 [Hydrogenobacter thermophilus TK-6]
gi|308752778|gb|ADO46261.1| Sporulation domain protein [Hydrogenobacter thermophilus TK-6]
Length = 359
Score = 35.9 bits (80), Expect = 5.4, Method: Composition-based stats.
Identities = 30/262 (11%), Positives = 72/262 (27%), Gaps = 26/262 (9%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K I + C V + T + Y+ + +N+S A
Sbjct: 1 MKKPIFFILLILLSCA-----------VRDEQRTKEW--QYYYDMGMSSYVAKNYSDAIA 47
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG-----EEYITQYPESKNVDYV 133
F + ++ P +L ++ K + + +
Sbjct: 48 NFFRATQIAPKEPKVWNALGLAYTEAKEFQKAESSFQKALEIDPAYTEAKMNLGILYYKA 107
Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
+ Y++++ + T +
Sbjct: 108 KDYTKAKNILEDALKDETFSQKHMAYYYLAKVYKALGEDNKYLENLEKATAYNPLFLEAQ 167
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+E+ Y +RGEY A + +L N D ++AR L +E++ ++ I
Sbjct: 168 MELAEEYERRGEYEKAKYVYTTLLNNNVDIPLVSLSLAR---VNFELGNYEESKSIIKSI 224
Query: 254 -----QERYPQGYWARYVETLV 270
+ + + + ++
Sbjct: 225 LERKDGDNFVKSQAYSLLNKIL 246
>gi|145495406|ref|XP_001433696.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124400815|emb|CAK66299.1| unnamed protein product [Paramecium tetraurelia]
Length = 456
Score = 35.9 bits (80), Expect = 5.4, Method: Composition-based stats.
Identities = 24/214 (11%), Positives = 58/214 (27%), Gaps = 5/214 (2%)
Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCS--RDFPFAGVARKSLL 98
++ + D +Y + +A+ + K +N+ +A E F+ + + +
Sbjct: 142 KAIEEYTKVFTIDKQYYTSYFNRAIAYYKLKNYDRAVEDFSTVIEINPEYYMAYYHRGEI 201
Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
+ + E P + + Q + DQ L
Sbjct: 202 YELQNKMDQASKDYVRASQLEPCLTIPYPQFKKIPEKSSYETSYQHLSLAIQDQPDNILA 261
Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
++ + +A G ++ AI + +
Sbjct: 262 YNNRGFVLFEMNQPLEALENYNKAIEIKPTIATLYYNRGNIAYFLNQFEKAIEDYSQTIL 321
Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ +A Y L DEA++ + +
Sbjct: 322 IDPNY---AKAYCNRGTIYKQLEKFDEAKKDIEI 352
>gi|86141400|ref|ZP_01059946.1| putative outer membrane protein, probably involved in nutrient
binding [Leeuwenhoekiella blandensis MED217]
gi|85831959|gb|EAQ50414.1| putative outer membrane protein, probably involved in nutrient
binding [Leeuwenhoekiella blandensis MED217]
Length = 492
Score = 35.9 bits (80), Expect = 5.4, Method: Composition-based stats.
Identities = 20/246 (8%), Positives = 54/246 (21%), Gaps = 19/246 (7%)
Query: 19 LYKFALTIFFS--IAVCFLVGWERQSSRDVYLDSVTDVR-YQREVYEKAVLFLKEQNFSK 75
+ K+ + + F +A +V ++ ++ E Y+ A++ +
Sbjct: 1 MKKYNIQLTFLSLLAAVLMVACGDDFVEVDPINENSEDFFNSEEDYQDALV----GAYDL 56
Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
+ + + Q + +
Sbjct: 57 LQATYLNVMVGEIASDNTLAGGESATDTPGIQEIDNMT---HTPVNQQLRDIWGWMFAGV 113
Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
+ + + + + R + + V +L +
Sbjct: 114 NRANYILEFQDKIDFSGKDQIIAQARFLRAYYYFELVKWFGDVPLAVD---QRLLFGDQF 170
Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE------EAMARLVEAYVALALMDEAREV 249
+ Y + E A A L +AY+ EA
Sbjct: 171 NVDRTPRTEVYAQIEQDLIFAAETLPATQAEEGRITSGAARALLGKAYLYQDKFTEAASA 230
Query: 250 VSLIQE 255
+ +
Sbjct: 231 LDQVIA 236
>gi|302685313|ref|XP_003032337.1| hypothetical protein SCHCODRAFT_76799 [Schizophyllum commune H4-8]
gi|300106030|gb|EFI97434.1| hypothetical protein SCHCODRAFT_76799 [Schizophyllum commune H4-8]
Length = 571
Score = 35.9 bits (80), Expect = 5.5, Method: Composition-based stats.
Identities = 23/209 (11%), Positives = 54/209 (25%), Gaps = 8/209 (3%)
Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
+ Y + +L + ++ +A ++F + S P A S + +
Sbjct: 303 EPDNALSWYAVGMWYLSKGSWGQARQFFAKSSLLDPRFAPAWISFAHAFSFEGEHDHAIT 362
Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
A S + +L +Y Q + ++ +
Sbjct: 363 AYSTCTRMFNGSHLPYMFLGMEHLALCNYGQANDAFRASRSLCDSDPLLLNELGVLAYQR 422
Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE---- 228
K A Y + + + + + + E E
Sbjct: 423 QNYKEAAEYFEQALSVANVTQSSHTTWQATYINVGTCYRKLRRLPEAVKAYEKVLESDPR 482
Query: 229 ---AMARLVEAYVALALMDEA-REVVSLI 253
A++ L Y + +D A + +
Sbjct: 483 HAVALSFLAICYHLMGDLDSAILKYHETL 511
>gi|86151186|ref|ZP_01069401.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
260.94]
gi|86153659|ref|ZP_01071862.1| tetratricopeptide repeat domain protein [Campylobacter jejuni
subsp. jejuni HB93-13]
gi|315123716|ref|YP_004065720.1| hypothetical protein ICDCCJ07001_107 [Campylobacter jejuni subsp.
jejuni ICDCCJ07001]
gi|85841533|gb|EAQ58780.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
260.94]
gi|85842620|gb|EAQ59832.1| tetratricopeptide repeat domain protein [Campylobacter jejuni
subsp. jejuni HB93-13]
gi|315017438|gb|ADT65531.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
Length = 315
Score = 35.9 bits (80), Expect = 5.5, Method: Composition-based stats.
Identities = 10/87 (11%), Positives = 28/87 (32%)
Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
++ + + A +G K+ Y AI ++ + + ++ + + +
Sbjct: 225 NFLITKQYKPARANFWLGEIEYKQKNYNNAIVYYKKSSSLSTKGDYFPKLLYHTAISLDK 284
Query: 240 LALMDEAREVVSLIQERYPQGYWARYV 266
A ++ YP A+
Sbjct: 285 TGDTKTANGFYKALKTNYPNSPEAKAS 311
>gi|167534662|ref|XP_001749006.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163772430|gb|EDQ86081.1| predicted protein [Monosiga brevicollis MX1]
Length = 762
Score = 35.9 bits (80), Expect = 5.5, Method: Composition-based stats.
Identities = 24/224 (10%), Positives = 49/224 (21%), Gaps = 6/224 (2%)
Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ---CSRDFPFAGVARKS 96
Q+ D + K L + ++A E++++ A
Sbjct: 403 TQAEEYADRAIQADKYNPNAMVNKGNCLLAQDKHAEAIEFYHEALAVDSGCFEALYNLGL 462
Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
A + + Y + + R
Sbjct: 463 AHRRLGDLDEALDCFLKLADMLPEHAEVVYQVAAVYEELEDFDQSCEWFETLIGLVRTDP 522
Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
L++ + ++ + F A G YY++ AI F+
Sbjct: 523 NALRHFGELYDKLEDKSEAFKYHFEAFRYFPSDIATISWFGSYYIESQFIEKAIQYFERA 582
Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
+ Y +A EV +P
Sbjct: 583 AEVQPGQVKW---RLMIGSCYRRTGNYQQALEVYKRTHRLFPDN 623
>gi|163785962|ref|ZP_02180410.1| TPR repeat containing protein [Flavobacteriales bacterium ALC-1]
gi|159877822|gb|EDP71878.1| TPR repeat containing protein [Flavobacteriales bacterium ALC-1]
Length = 415
Score = 35.9 bits (80), Expect = 5.5, Method: Composition-based stats.
Identities = 17/203 (8%), Positives = 53/203 (26%), Gaps = 5/203 (2%)
Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
+ + +KA + K+ KA + + ++
Sbjct: 40 EPTNEEVFIQKANVLSKQDEHQKAIDTLLIAIGMSNTPENDADLYALVGMEYLFLDQFDN 99
Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
A ++ + + + + + Y +
Sbjct: 100 AIVYFKK-CLETDTTDYSALHNVIYCYDFLNKNEEAIEYLNGFLDKNPYCEVAWHQLGRQ 158
Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE---- 228
+ + + Y+++G+ + + +++ + NY ++
Sbjct: 159 YFTIKEYEKANAAFDFAIISDDTFVGAYIEKGKVLEKLKKYEEAIENYKITLALDDPTSF 218
Query: 229 AMARLVEAYVALALMDEAREVVS 251
A+ R+ Y L D A + +
Sbjct: 219 ALLRMGFCYDKLGQEDLAIQFLK 241
>gi|119953007|ref|YP_945216.1| surface-located membrane protein 1 [Borrelia turicatae 91E135]
gi|119861778|gb|AAX17546.1| surface-located membrane protein 1 [Borrelia turicatae 91E135]
Length = 785
Score = 35.9 bits (80), Expect = 5.5, Method: Composition-based stats.
Identities = 17/220 (7%), Positives = 57/220 (25%)
Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
+ + +Y + Y+ ++ K + + ++ + F++ P A + S
Sbjct: 425 KKAEAIYEKIANITNEAEDHYKVGIMKFKLKKYEESIKAFDKTISLNPKHKKAYTNKGTS 484
Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
+ + + +A Y + + TK
Sbjct: 485 LILSHKPKQAIEAFKKAITIDQNYDTAYYKKGIAEEQNNDKQNAFLSFKKAYEITKNPHY 544
Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220
+ + + ++ + ++ + + E +
Sbjct: 545 ALKTGIIANYIGDFKNSEKYLDKASTSIKEKNDIMFYNLAIAKFENDNLNESLISINKAL 604
Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
E + Y+ +EA + + + + P+
Sbjct: 605 DINPEKSEYLYLKASIYLTKENYNEAIPLYNSVILKNPEN 644
>gi|88603649|ref|YP_503827.1| tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1]
gi|88189111|gb|ABD42108.1| Tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1]
Length = 436
Score = 35.9 bits (80), Expect = 5.5, Method: Composition-based stats.
Identities = 36/212 (16%), Positives = 64/212 (30%), Gaps = 13/212 (6%)
Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAG----VARKSLLMSAFVQYSAGKYQQAASLGEE 119
FL + +A + F + P + L + A + +A + +
Sbjct: 56 GKAFLGLGRYDRADDCFIRALDIDPENPEALTMRASVLRLIALQNQDPMRCLEAVEICNK 115
Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS------RIVERYTNSP 173
+ +PE + + + + + ++A K+ Y R +
Sbjct: 116 TLKIHPEYGPALHEKGMALWTLGKRDEAMSLFEQAKKIHASYPYPWDLKGRYLFEKRQYH 175
Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
A + Q +GR +K G Y +AI F+ L D A L
Sbjct: 176 EAIEAYEEALEKKPQDPDLLFSMGRALMKIGGYHSAIQFFKKCLKIRPDYTA---AWLLL 232
Query: 234 VEAYVALALMDEAREVVSLIQERYPQGYWARY 265
+Y L DEA + E P R
Sbjct: 233 GNSYKVLNQFDEAIDAYEEAMELDPGSTKYRK 264
Score = 35.9 bits (80), Expect = 6.0, Method: Composition-based stats.
Identities = 19/192 (9%), Positives = 47/192 (24%), Gaps = 8/192 (4%)
Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG----E 118
K +++ + +A E + + P S+ + Q
Sbjct: 164 KGRYLFEKRQYHEAIEAYEEALEKKPQDPDLLFSMGRALMKIGGYHSAIQFFKKCLKIRP 223
Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
+Y + N V + + D +TK + + Y +G
Sbjct: 224 DYTAAWLLLGNSYKVLNQFDEAIDAYEEAMELDPGSTKYRKYIADVYLVMGKEALYKEGK 283
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY----SDAEHAEEAMARLV 234
++ + +G + ++ A + A +
Sbjct: 284 PQEAIEYFDKTIRMIANHITAWFSKGVAYKKLGAYRNATACFLKVVEMDPQNGHAYYEMA 343
Query: 235 EAYVALALMDEA 246
+ +EA
Sbjct: 344 QILEKTGNNEEA 355
>gi|6456747|gb|AAF09252.1|AF200703_1 putative hemolysin [Leptospira borgpetersenii]
Length = 378
Score = 35.9 bits (80), Expect = 5.5, Method: Composition-based stats.
Identities = 20/215 (9%), Positives = 55/215 (25%), Gaps = 25/215 (11%)
Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
A ++K+ N+ + + + + K+ + GK A + ++Y
Sbjct: 159 ADYYMKKGNYDLSRKNYVLALQ---EDPENVKARVRWGKSLRRMGKDWSAYEVYDDYAQA 215
Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
S Y ++ + + +E
Sbjct: 216 GFYFDPEKEKVTSEFRSGILEKARQLYVRKQYYGAIDTFKKALEM--------------- 260
Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243
+ + + + + ++ + D + A+ R Y
Sbjct: 261 GISPKAEEQALFYIAESYEAVGKSDSALQYLNRVLGNQDGSLDQTALFRKGTIYFKSGKY 320
Query: 244 DEAREVVSLIQERYPQGY-------WARYVETLVK 271
++A + +RYP W + ++
Sbjct: 321 EKAAALFQEASDRYPDSPVGRKASAWKKESLDQIE 355
>gi|307591441|ref|YP_003900240.1| serine/threonine protein kinase with TPR repeats [Cyanothece sp.
PCC 7822]
gi|306986295|gb|ADN18174.1| serine/threonine protein kinase with TPR repeats [Cyanothece sp.
PCC 7822]
Length = 699
Score = 35.9 bits (80), Expect = 5.6, Method: Composition-based stats.
Identities = 29/237 (12%), Positives = 63/237 (26%), Gaps = 20/237 (8%)
Query: 32 VCFLVGW-ERQSSRDVYLDSVTDVRYQREVY---EKAVLFLKEQNFSKAYEYFNQCSRDF 87
V L+ + + V + E++ A K N+ +A NQ +
Sbjct: 396 VLGLIYCRNSRWTEAVKILQQASNLSPHEIWIQANLAWALGKIGNWQQAEIAINQAIQID 455
Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147
+ A F Q K Q+A+ Q N D ++ + +
Sbjct: 456 HTSPFALGIKAWIHFHQQQPKKTMQSATQAVFQANQKTSQNNKDIKRWVYPYLLISLDKV 515
Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKG-------------ARFYVTVGRNQLAAKEV 194
+ + ++++++ + Y + N +
Sbjct: 516 SQQQTTVERRIEEFITQVPDSSFAWGYKGWKQAVGRLWNNALSCFQQINYQFNTHSWVLF 575
Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
G + AI + + N+ RL + EA+ +
Sbjct: 576 NYGVTQELLNDLEGAIKAYLIYSQNFPPNPFVA---FRLGTLLGKIGRWQEAKTYLE 629
>gi|300871439|ref|YP_003786312.1| thiol disulfide interchange protein DsbD like protein [Brachyspira
pilosicoli 95/1000]
gi|300689140|gb|ADK31811.1| thiol disulfide interchange protein DsbD like protein [Brachyspira
pilosicoli 95/1000]
Length = 275
Score = 35.9 bits (80), Expect = 5.6, Method: Composition-based stats.
Identities = 26/252 (10%), Positives = 61/252 (24%), Gaps = 18/252 (7%)
Query: 19 LYKFALTIFFSIAVCFLVGWE---------RQSSRDVYLDSVTDVRYQREVY-------- 61
+ K + I I + F + + + V D+ +VY
Sbjct: 1 MNKNIMMIISLIVIAFTISCNDSYAAIKWEKDLASAVKKAKDKDLPIMIDVYTDWCSWCK 60
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
E + A + + + VQ +
Sbjct: 61 ELDKNTYANKEVIDAAKKMVSVKLNPETSKEGADIAQKYG-VQGFPTILFISHDGFVLEN 119
Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
Y + IR V + + L +S
Sbjct: 120 VGGYVEGEKFVPYMKNAQEKLKKIRIVLQSKEPSLEKLDLYMESGNEEESSKIFNALLEK 179
Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
+ + ++ + G ++ +Y A F ++ Y +++ A V
Sbjct: 180 KAISKEAMSKYILGFGLMRAQKNDYDTANSYFDRIIKEYPNSQEVYIAHYYKAVTMVLAG 239
Query: 242 LMDEAREVVSLI 253
+E ++ + +
Sbjct: 240 EKEEPKKYLEKL 251
>gi|42527799|ref|NP_972897.1| TPR domain-containing protein [Treponema denticola ATCC 35405]
gi|41818627|gb|AAS12816.1| TPR domain protein [Treponema denticola ATCC 35405]
Length = 226
Score = 35.9 bits (80), Expect = 5.6, Method: Composition-based stats.
Identities = 16/205 (7%), Positives = 48/205 (23%), Gaps = 5/205 (2%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
++ V ++++ +A +F S + + + + + S +
Sbjct: 6 KEGVNLYNKKDYQEALVFFLSVSTEDVLIKIEINYYIGLIYSRLSEYEQALEYLEQVVTA 65
Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
++ + + R ++ ++ Y
Sbjct: 66 SKDIAKVYQCRLILAFIYANTGRTRLAEFELSKLIEAGYESVQVFSSLAYVYYEHHEIEK 125
Query: 182 VTVGRNQ-----LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
+ G Y+ L + +
Sbjct: 126 AIDYYEKALKTAPENSTALNGLAYILAETDRDLTRSLLLCKKAVEKQPENPAYLDSMALI 185
Query: 237 YVALALMDEAREVVSLIQERYPQGY 261
Y + L EA+ ++ +E+ P
Sbjct: 186 YHKMNLPSEAKSYITRAKEKLPDNK 210
>gi|291569299|dbj|BAI91571.1| TPR domain protein [Arthrospira platensis NIES-39]
Length = 530
Score = 35.9 bits (80), Expect = 5.6, Method: Composition-based stats.
Identities = 22/204 (10%), Positives = 45/204 (22%), Gaps = 7/204 (3%)
Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
D ++ K +A + + S P + L + Y +
Sbjct: 303 VDPNSASFYHQLGQALAKCDRLLEALAAYKRASELHPTSTPVLFDLGQALTKLYHWSEAI 362
Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----IRDVPYDQRATKLMLQYMSRIVE 167
+ D + + ++ +
Sbjct: 363 ATYQKALYLNPPNQAEIQTHLQEVQDKQRHLDEEIAAYSDSHEFHPNSSESYEKFAQFLR 422
Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
+ Q A ++G + + AI +Q + H +
Sbjct: 423 SKGKIEDAIIGFHQACILNPQSAVAHHQLGYTLARGQRWDEAILAYQKAAELNPYSPHVQ 482
Query: 228 EAMARLVEAYVALALMDEAREVVS 251
L EA V +DEA
Sbjct: 483 ---YHLGEALVEEGRLDEAIAHFK 503
>gi|150009734|ref|YP_001304477.1| TPR domain-containing protein [Parabacteroides distasonis ATCC
8503]
gi|255012976|ref|ZP_05285102.1| TPR domain-containing protein [Bacteroides sp. 2_1_7]
gi|149938158|gb|ABR44855.1| TPR domain protein [Parabacteroides distasonis ATCC 8503]
Length = 1186
Score = 35.9 bits (80), Expect = 5.6, Method: Composition-based stats.
Identities = 20/194 (10%), Positives = 47/194 (24%), Gaps = 1/194 (0%)
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
Y Q + ++ + K + + E + D + L
Sbjct: 575 YLQQLPFTQEDIDASNIIIIDGLYNMAMIYKDKLEDIPLSVEAFENLERRFPDNEHRLES 634
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
++ + + + V + + + +
Sbjct: 635 YYQVYLMALKTGNTVLATEYKNKLMNAFPESDYAVAVADPNYEYNIRMMDVVQDSIYQAT 694
Query: 199 YYLKRGEYVA-AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
Y A F+ V Y A + M +YV + + + + E+Y
Sbjct: 695 YDRYLESDTAYVRKSFRYVSEKYPLATLMPKFMFLDALSYVQAGDAEGFKNALKALVEKY 754
Query: 258 PQGYWARYVETLVK 271
P ++K
Sbjct: 755 PNADVTELAGEMLK 768
>gi|317026444|ref|XP_001389609.2| TPR domain protein [Aspergillus niger CBS 513.88]
Length = 730
Score = 35.9 bits (80), Expect = 5.7, Method: Composition-based stats.
Identities = 22/163 (13%), Positives = 54/163 (33%), Gaps = 5/163 (3%)
Query: 107 AGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIV 166
A + + + + LV +S+ + ++
Sbjct: 156 PYLKIMADENYGIRVDHLSDLRFLPSHDPLVPVSWGGRRGMDQTASYCKTKANDHFNK-- 213
Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
+Y + + ++ + YLK ++ AA+ + VL++ +
Sbjct: 214 GQYYLAIDWYSKALDTSPTTDEALIIRLNRALTYLKTHQFDAALYDLKTVLSDQESS--- 270
Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
E+A+ R +A LA +E+ +V ++ +P A+
Sbjct: 271 EKALFRKSQALYHLARFEESCKVHQVLFATFPNNTAAKLEFNR 313
>gi|307210931|gb|EFN87246.1| Tetratricopeptide repeat protein 26 [Harpegnathos saltator]
Length = 1038
Score = 35.9 bits (80), Expect = 5.7, Method: Composition-based stats.
Identities = 23/197 (11%), Positives = 58/197 (29%), Gaps = 11/197 (5%)
Query: 65 VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY 124
FL++++++ A + + + + + AF + ++
Sbjct: 493 EEFLEKRDYTGALTLL-EFNSSTGGSLESDLWMGYCAFHLGDYKRAVTVYENLKKRDYVP 551
Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184
P+ + Y Y + + + + + S + + V
Sbjct: 552 PDVRTNLACCYFYLGMYPESQKILEEAADSKLRTRLLFHLAHKMGNESKLKEYHQMLQDV 611
Query: 185 GRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM-ARLVEAYVALALM 243
+QL+ + R + + V A+ + Y L
Sbjct: 612 IEDQLSLASIHYLRAHYQEAIDVYKRILLDNRDYL---------ALNVYVALCYYKLDYY 662
Query: 244 DEAREVVSLIQERYPQG 260
D A+EV+ + ++YP
Sbjct: 663 DVAQEVLQVYLQKYPDS 679
>gi|261365623|ref|ZP_05978506.1| HemY family protein [Neisseria mucosa ATCC 25996]
gi|288565859|gb|EFC87419.1| HemY family protein [Neisseria mucosa ATCC 25996]
Length = 407
Score = 35.9 bits (80), Expect = 5.7, Method: Composition-based stats.
Identities = 37/271 (13%), Positives = 73/271 (26%), Gaps = 16/271 (5%)
Query: 14 AWAYQLYKFALTIFFSIAVC-----FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFL 68
L+ F L + + F+VG +R + R A L
Sbjct: 36 MMRVNLHAFILGLVLFVVALYFLIKFIVGLMNIPARMQRFGTARKGRQAAVALNSAGLAF 95
Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
E F KA + + + +L++ A ++ ++ + +
Sbjct: 96 FEGRFEKAEQEAAKVLENKEAGDNRNLALMLGAHAADQMENFELRDHYLKDIEKLPNKQQ 155
Query: 129 --------NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
+ + ++L + + + +
Sbjct: 156 LSRYLLLAESALGRRDYPTALENLNAAARIHPNLSRLARLQLRYAFDHGDAEDVLAKSEK 215
Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
+ G E Y + + R + L +A A+E + E Y L
Sbjct: 216 LMKAGAINDFEAEQYQSWAYRRLLAEASDAARLKACLKRIPEALKADELCVAIAEKYERL 275
Query: 241 ALMDEAREVVSLIQERYPQGYWARYVETLVK 271
L EA + V YPQ +E V+
Sbjct: 276 GLYTEAVKWVR---HYYPQNRRPELLEAFVE 303
>gi|206585491|gb|ACI15551.1| serine/threonine protein kinase [Arthrospira platensis S6]
Length = 732
Score = 35.9 bits (80), Expect = 5.7, Method: Composition-based stats.
Identities = 28/213 (13%), Positives = 65/213 (30%), Gaps = 10/213 (4%)
Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
L+ V+ + + ++ V L+ + A + FN+ + FP A + + +
Sbjct: 333 QVLNRPDPVKSEAAL-KRGVERLESGDPEAAIKAFNRSIQLFPDNSEAFRKRANAYYDLQ 391
Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
+ + + P+ + Y + I D+ R +
Sbjct: 392 KYEQAIADYTQAIKLDPTNPDIYFNRSLAYHQMGDFGNAINDLNQVIRLNPEDTDAFYQ- 450
Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA-- 223
+ Y + + ++ ++ + Y RG Q +A+Y++A
Sbjct: 451 ---RGLAHYTQENYEAAILDYTEVIRRQPDHSEAYRARGSAHVKAGNLQAGMADYTEAIR 507
Query: 224 --EHAEEAMARLVEAYVALALMDEA-REVVSLI 253
+ A A L A + +I
Sbjct: 508 LNPQSAAAYYNRGRARFHLGDYQGALADYNQVI 540
>gi|168217474|ref|ZP_02643099.1| tetratricopeptide repeat protein [Clostridium perfringens NCTC
8239]
gi|182380480|gb|EDT77959.1| tetratricopeptide repeat protein [Clostridium perfringens NCTC
8239]
Length = 475
Score = 35.9 bits (80), Expect = 5.7, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 35/110 (31%), Gaps = 6/110 (5%)
Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS----- 221
++Y ++ + + +G Y + AI FQ L +Y
Sbjct: 362 KKYEDALKDFEKAYAFSSDSYLRPHLIYFMGTSYENLDKNTEAIKYFQEYLKDYKAKPDA 421
Query: 222 -DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
D + + + L Y E+++ I+ YP + V +
Sbjct: 422 EDFMYTPQCLYNLAILYNKEGNSAESKKYAQEIENDYPNTMFYNDVTKKI 471
>gi|216264585|ref|ZP_03436577.1| FF domain protein [Borrelia burgdorferi 156a]
gi|215981058|gb|EEC21865.1| FF domain protein [Borrelia burgdorferi 156a]
Length = 1173
Score = 35.9 bits (80), Expect = 5.7, Method: Composition-based stats.
Identities = 23/219 (10%), Positives = 60/219 (27%)
Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
+ + Y + Q + Y+ ++ K + + + E F+Q + P A + ++
Sbjct: 814 KAENAYEKIIKLTNTQEDHYKLGIIRFKLKKYEHSIESFDQTIKLDPKHKKALHNKGIAL 873
Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
+ K ++ + Y + + Q K
Sbjct: 874 MMLNKNKKAIESFEKAIQIDKNYGTAYYQKGIAEEKNGDMQQAFASFKNAYNLDKNPNYA 933
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
+ + + + + N E+ I + + E + +
Sbjct: 934 LKAGIVSNNLGNFKQSEEYLNFFNANAKKPNEIAIYNLSIAKFENNKLEESLETINKAID 993
Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
E + + A + SL+ E+ P+
Sbjct: 994 LNPEKSEYLYLKASINLKKENYQNAISLYSLVIEKNPEN 1032
>gi|160895315|ref|ZP_02076086.1| hypothetical protein CLOL250_02874 [Clostridium sp. L2-50]
gi|156863008|gb|EDO56439.1| hypothetical protein CLOL250_02874 [Clostridium sp. L2-50]
Length = 469
Score = 35.9 bits (80), Expect = 5.7, Method: Composition-based stats.
Identities = 13/102 (12%), Positives = 27/102 (26%)
Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
N K Y + +LA + + LK + +
Sbjct: 323 TTKNDTLTKQVSEYEKKSKAELADADKVSMQLALKYYNDTQYDKAMTEFDKVLETSPDYD 382
Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
A+ Y+ D+A+ ++ P + +L
Sbjct: 383 VALYYKALCYLGTEDEDKAKTAFETFLDKCPDSIYYTVAVSL 424
>gi|157375500|ref|YP_001474100.1| hypothetical protein Ssed_2363 [Shewanella sediminis HAW-EB3]
gi|157317874|gb|ABV36972.1| conserved hypothetical protein [Shewanella sediminis HAW-EB3]
Length = 344
Score = 35.9 bits (80), Expect = 5.7, Method: Composition-based stats.
Identities = 20/261 (7%), Positives = 68/261 (26%), Gaps = 34/261 (13%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE----------------- 62
++A+T+ ++++ LV + + L+ ++++Y+
Sbjct: 11 KRYAVTVLIALSLQLLVACSATKTDEELLNLEVTPPTRQDLYDGSSMGSVTAANPPKDEA 70
Query: 63 ----KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
+A ++ N +A + Q ++ + + L
Sbjct: 71 DALVRAKKEEEKGNLDQALYLYVQALDFKADN-------ALTLYNIARIHSIKGNIQLAY 123
Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
+ + + R + + + + + T +
Sbjct: 124 LTYNESLTIDPEMLMSHAGLGLINMDKRQHEQAKIHLEKAVS-LDQSRLTVTGKEVTEEG 182
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
+ + + + Y + A + L L + + L ++
Sbjct: 183 MYLLDLQSPIRIYN--ALAILYDLENRHEEARHYYLLALRKEPHSALI---ITNLGYSHY 237
Query: 239 ALALMDEAREVVSLIQERYPQ 259
+ A + + + P
Sbjct: 238 LGGNIALAEKYLKKAIKEDPN 258
>gi|157876187|ref|XP_001686453.1| hypothetical protein [Leishmania major strain Friedlin]
gi|68129527|emb|CAJ08070.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 425
Score = 35.9 bits (80), Expect = 5.7, Method: Composition-based stats.
Identities = 31/206 (15%), Positives = 62/206 (30%), Gaps = 14/206 (6%)
Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQC---SRDFPFAGVARKSLLMSAFVQYSAGKY 110
+ E+ ++A ++ +FS A E + + + P + L A G
Sbjct: 77 EKELIELNKEAAEAFEKGDFSSAIEAWEKVAHSKQHTPNSPTLMSCLNNLACAYGETGDN 136
Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
+ L E D+ Y + + ++ K +L+ + E+
Sbjct: 137 IRKLKLLERSRDLVEAVYGTDHPQYGMVLYNMACAKEEMGLYADMKQLLEQSLALHEKRF 196
Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
N + K R + + E E +R + + AM
Sbjct: 197 NPLHAKVGRVLLLLAAAHGHLGEHEAQLRTAERAYEIVKRHC---GPEHVQTTI----AM 249
Query: 231 ARLVEAYVALALMD----EAREVVSL 252
L AY A ++ A+ S+
Sbjct: 250 MTLGRAYGAAGQVERQLQLAQAAYSI 275
>gi|27467520|ref|NP_764157.1| hypothetical protein SE0602 [Staphylococcus epidermidis ATCC
12228]
gi|27315063|gb|AAO04199.1|AE016745_298 conserved hypothetical protein [Staphylococcus epidermidis ATCC
12228]
Length = 270
Score = 35.9 bits (80), Expect = 5.7, Method: Composition-based stats.
Identities = 10/70 (14%), Positives = 20/70 (28%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K I L ++ + E+ EKA LK++ + +
Sbjct: 1 MKKLFGIILVLALTIALAACGGGKDKEKTITVGASPAPHAEILEKAKPLLKKKGYDLKIK 60
Query: 79 YFNQCSRDFP 88
N +
Sbjct: 61 SINDYTTPNK 70
>gi|289548346|ref|YP_003473334.1| hypothetical protein Thal_0573 [Thermocrinis albus DSM 14484]
gi|289181963|gb|ADC89207.1| Tetratricopeptide TPR_2 repeat protein [Thermocrinis albus DSM
14484]
Length = 222
Score = 35.9 bits (80), Expect = 5.7, Method: Composition-based stats.
Identities = 14/80 (17%), Positives = 24/80 (30%)
Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
+ G+ Q K+ E + A +F + + A L
Sbjct: 85 DQPPPASQGQTQGYEKDYEEAMRLYHLRQLHQAKEKFIDFIKKNPKTPLTDNAYLWLGVV 144
Query: 237 YVALALMDEAREVVSLIQER 256
Y L +A+ V + ER
Sbjct: 145 YRDLGDWQKAQAVWLTLVER 164
>gi|284052491|ref|ZP_06382701.1| TPR repeat-containing serine/threonin protein kinase [Arthrospira
platensis str. Paraca]
Length = 755
Score = 35.9 bits (80), Expect = 5.7, Method: Composition-based stats.
Identities = 28/213 (13%), Positives = 65/213 (30%), Gaps = 10/213 (4%)
Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
L+ V+ + + ++ V L+ + A + FN+ + FP A + + +
Sbjct: 356 QVLNRPDPVKSEAAL-KRGVERLESGDPEAAIKAFNRSIQLFPDNSEAFRKRANAYYDLQ 414
Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
+ + + P+ + Y + I D+ R +
Sbjct: 415 KYEQAIADYTQAIKLDPTNPDIYFNRSLAYHQMGDFGNAINDLNQVIRLNPEDTDAFYQ- 473
Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA-- 223
+ Y + + ++ ++ + Y RG Q +A+Y++A
Sbjct: 474 ---RGLAHYTQENYEAAILDYTEVIRRQPDHSEAYRARGSAHVKAGNLQAGMADYTEAIR 530
Query: 224 --EHAEEAMARLVEAYVALALMDEA-REVVSLI 253
+ A A L A + +I
Sbjct: 531 LNPQSAAAYYNRGRARFHLGDYQGALADYNQVI 563
>gi|262382954|ref|ZP_06076091.1| TPR domain-containing protein [Bacteroides sp. 2_1_33B]
gi|262295832|gb|EEY83763.1| TPR domain-containing protein [Bacteroides sp. 2_1_33B]
Length = 1181
Score = 35.9 bits (80), Expect = 5.7, Method: Composition-based stats.
Identities = 20/194 (10%), Positives = 47/194 (24%), Gaps = 1/194 (0%)
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
Y Q + ++ + K + + E + D + L
Sbjct: 575 YLQQLPFTQEDIDASNIIIIDGLYNMAMIYKDKLEDIPLSVEAFENLERRFPDNEHRLES 634
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
++ + + + V + + + +
Sbjct: 635 YYQVYLMALKTGNTALATEYKNKLMNAFPESDYAVAVADPNYEYNIRMMDVVQDSIYQAT 694
Query: 199 YYLKRGEYVA-AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
Y A F+ V Y A + M +YV + + + + E+Y
Sbjct: 695 YDRYLESDTAYVRKSFRYVSEKYPLATLMPKFMFLDALSYVQAGDAEGFKNALKALVEKY 754
Query: 258 PQGYWARYVETLVK 271
P ++K
Sbjct: 755 PNADVTELAGEMLK 768
>gi|255535140|ref|YP_003095511.1| TPR-domain containing protein [Flavobacteriaceae bacterium 3519-10]
gi|255341336|gb|ACU07449.1| TPR-domain containing protein [Flavobacteriaceae bacterium 3519-10]
Length = 987
Score = 35.9 bits (80), Expect = 5.7, Method: Composition-based stats.
Identities = 25/219 (11%), Positives = 53/219 (24%), Gaps = 6/219 (2%)
Query: 43 SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102
+ + Q + + NF A +YF + ++ A
Sbjct: 418 DKMPDSTPELNKIDQEVSFLLGTEEFNKGNFDAAEKYFLRSLEFNINKEFNTRATYWLAQ 477
Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM-LQY 161
Y G Y A E + + K ++
Sbjct: 478 TYYQKGNYPSAIVRYERILNENFAEKQQLTYDLGYAYFKSKKFAQAQKYFSEYLKNPKTE 537
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR-----FQLV 216
E Y + + + + + +
Sbjct: 538 FKNDAELRLADTYYADNQLNEAIAIYDKTENADDYTLFQKAMALGFKGDTEAKISSLKSL 597
Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
L+ Y +E+A++A+ + AY A A + S + +
Sbjct: 598 LSKYKSSEYADDALYEIGTAYAANEDFTNANDYFSQVIK 636
>gi|261403119|ref|YP_003247343.1| serine/threonine protein kinase with TPR repeats
[Methanocaldococcus vulcanius M7]
gi|261370112|gb|ACX72861.1| serine/threonine protein kinase with TPR repeats
[Methanocaldococcus vulcanius M7]
Length = 1173
Score = 35.9 bits (80), Expect = 5.7, Method: Composition-based stats.
Identities = 22/215 (10%), Positives = 59/215 (27%), Gaps = 9/215 (4%)
Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
+ S + + ++ E+ + A + ++ A + +N+ + P V +
Sbjct: 136 SKNSIAKAKIKMIENILRIEEINKTAKNLFNKGKYNDAIKLYNEALKLDPKNDVLWNNCG 195
Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
+ + + + + Y + + +
Sbjct: 196 NVYYALKDYQMALKCYEKALSLNPKNELAMYNKALILKDMREYKKALSIINTLMHLNPKN 255
Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
+ + + N ++ K G Y AI L+
Sbjct: 256 EKVF------ELRKKIIAEIGNNLNQSDNNSKFPTLQKAVKEYKNGNYYKAIELLNQCLS 309
Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+ + E + L +AY+ + +A E + I
Sbjct: 310 SNENDT---EVLRYLGDAYLNIGNYSKALECFNKI 341
>gi|254670501|emb|CBA06243.1| fimbrial biogenesis protein [Neisseria meningitidis alpha153]
Length = 253
Score = 35.9 bits (80), Expect = 5.7, Method: Composition-based stats.
Identities = 25/243 (10%), Positives = 61/243 (25%), Gaps = 10/243 (4%)
Query: 28 FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87
S+ + +G S R + V + + A+ +++ Q++ +A +
Sbjct: 9 ISLLLVLALGACSTSYRPSRAEKANQVSNIKT--QLAMEYMRGQDYRQATASIEDALKSD 66
Query: 88 PFAGVAR----KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
P +A + + ++QA S+ +
Sbjct: 67 PKNELAWLVRAEIYQYLKVNDKAQESFRQALSIKPDSAEINNNYGWFICGRLNRPAESMA 126
Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKR 203
D + +++ + + + Q K
Sbjct: 127 YFDKALADPTYPTPYIANLNKGICSAKQGQFGLAEAYLKRSLAAQPQFPPAFKELARTKM 186
Query: 204 GEYVAAIPRFQLVLANYSDAEHAEEAMARLV--EAYVALALMDEAREVVSLIQERYPQGY 261
+ Y +A L+ + AL A E + +Q +P
Sbjct: 187 LAGQLGDADY--YFKKYQSRVEVLQADDLLLGWKIAKALGNAQAAYEYEAQLQANFPYSE 244
Query: 262 WAR 264
+
Sbjct: 245 ELQ 247
>gi|115373495|ref|ZP_01460792.1| conserved hypothetical protein [Stigmatella aurantiaca DW4/3-1]
gi|310825299|ref|YP_003957657.1| tetratricopeptide repeat-containing protein [Stigmatella aurantiaca
DW4/3-1]
gi|115369501|gb|EAU68439.1| conserved hypothetical protein [Stigmatella aurantiaca DW4/3-1]
gi|309398371|gb|ADO75830.1| Tetratricopeptide repeat protein [Stigmatella aurantiaca DW4/3-1]
Length = 273
Score = 35.9 bits (80), Expect = 5.7, Method: Composition-based stats.
Identities = 15/64 (23%), Positives = 24/64 (37%)
Query: 190 AAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREV 249
A +++ G+Y AI ++ L Y D A+EA + AY D A
Sbjct: 12 ADEQLGFAGALHAEGDYYRAIGEYKRFLYLYPDEPRADEARLSIGRAYAQGGQADAAEAY 71
Query: 250 VSLI 253
+
Sbjct: 72 FLSL 75
>gi|114648905|ref|XP_509562.2| PREDICTED: intraflagellar transport protein 88 homolog isoform 9
[Pan troglodytes]
gi|114648907|ref|XP_001147872.1| PREDICTED: intraflagellar transport 88 homolog isoform 6 [Pan
troglodytes]
gi|114648909|ref|XP_001147353.1| PREDICTED: intraflagellar transport 88 homolog isoform 1 [Pan
troglodytes]
gi|114648911|ref|XP_001147810.1| PREDICTED: intraflagellar transport 88 homolog isoform 5 [Pan
troglodytes]
gi|114648913|ref|XP_001147652.1| PREDICTED: intraflagellar transport 88 homolog isoform 3 [Pan
troglodytes]
gi|114648917|ref|XP_001148082.1| PREDICTED: intraflagellar transport 88 homolog isoform 8 [Pan
troglodytes]
Length = 824
Score = 35.9 bits (80), Expect = 5.7, Method: Composition-based stats.
Identities = 21/193 (10%), Positives = 54/193 (27%), Gaps = 7/193 (3%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
KAV +L+++++++A E + A + L + + + +
Sbjct: 420 NKAVTYLRQKDYNQAVEILKVLEKKDSRVKSAAATNLSALYYMGKDFAQASSYADIAVNS 479
Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVP----YDQRATKLMLQYMSRIVERYTNSPYVKG 177
+Y + + + + + + + L + E+
Sbjct: 480 DRYNPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNRLDEALD 539
Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
+ A +I Y AI V++ +++L E Y
Sbjct: 540 CFLKLHAILRNSAEVLYQIANIYELMENPSQAIEWLMQVVSVIPTDPQV---LSKLGELY 596
Query: 238 VALALMDEAREVV 250
+A +
Sbjct: 597 DREGDKSQAFQYY 609
>gi|115453163|ref|NP_001050182.1| Os03g0367000 [Oryza sativa Japonica Group]
gi|108708340|gb|ABF96135.1| Peptidylprolyl isomerase PASTICCINO1, putative, expressed [Oryza
sativa Japonica Group]
gi|113548653|dbj|BAF12096.1| Os03g0367000 [Oryza sativa Japonica Group]
gi|215768523|dbj|BAH00752.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218192902|gb|EEC75329.1| hypothetical protein OsI_11710 [Oryza sativa Indica Group]
gi|222624979|gb|EEE59111.1| hypothetical protein OsJ_10973 [Oryza sativa Japonica Group]
Length = 632
Score = 35.9 bits (80), Expect = 5.7, Method: Composition-based stats.
Identities = 13/156 (8%), Positives = 36/156 (23%)
Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
A+ ++ + + I D+ + + R K
Sbjct: 361 FAYDKFPRPANVPEGAHVQWEIELLGFEMPKDWTGFTFQEIMDDAEKIKTTGNRLFKEGK 420
Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219
+++ Y G+ ++ +
Sbjct: 421 FELAKAKYEKVLREYNHVHPQDDDEGKIFANSRSSLHLNVAACYQKMGEYRKSIDTCNKV 480
Query: 220 YSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
+A+ R +Y+ L D+A++ +
Sbjct: 481 LEANPVHVKALYRRGMSYMLLGDFDDAKKDFEKMIA 516
>gi|15612437|ref|NP_224090.1| hypothetical protein jhp1372 [Helicobacter pylori J99]
gi|4155999|gb|AAD06961.1| putative [Helicobacter pylori J99]
Length = 841
Score = 35.9 bits (80), Expect = 5.7, Method: Composition-based stats.
Identities = 31/191 (16%), Positives = 63/191 (32%), Gaps = 3/191 (1%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
V+ KE++F+ A + F+ A V+ L++A+ A Y + + +
Sbjct: 177 NLGVIKFKEKDFNGALDLFDSSIASKENASVSAIDALVTAYHLQDADLYYHYLKIVRDTL 236
Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
+ + Y Y L + + + + + Y
Sbjct: 237 YKDYKKSFYSYAYALKSYYAGEYFEALSPLMHPNSNAFLKPNARLASKLFLMFKDETNAY 296
Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
+ ++ A E+ +G + G Y A+ Q L NY A+ L + +
Sbjct: 297 KQLQKSANAQDELALGLLQARLGHYKQALEHLQHYLHNYPKDL---NALMALELVSLKMG 353
Query: 242 LMDEAREVVSL 252
+A E + L
Sbjct: 354 DTLKASEALKL 364
>gi|15677175|ref|NP_274328.1| putative fimbrial biogenesis and twitching motility protein
[Neisseria meningitidis MC58]
gi|161870182|ref|YP_001599352.1| ftype IV pilus assembly protein [Neisseria meningitidis 053442]
gi|254805110|ref|YP_003083331.1| type IV pilus assembly protein PilF [Neisseria meningitidis
alpha14]
gi|7226550|gb|AAF41684.1| putative fimbrial biogenesis and twitching motility protein
[Neisseria meningitidis MC58]
gi|161595735|gb|ABX73395.1| ftype IV pilus assembly protein [Neisseria meningitidis 053442]
gi|254668652|emb|CBA06312.1| type IV pilus assembly protein PilF [Neisseria meningitidis
alpha14]
gi|254673131|emb|CBA07910.1| fimbrial biogenesis protein [Neisseria meningitidis alpha275]
gi|261392410|emb|CAX49952.1| type IV pilus biogenesis lipoprotein PilW [Neisseria meningitidis
8013]
gi|325144550|gb|EGC66849.1| type IV pilus biogenesis/stability protein [Neisseria meningitidis
M01-240013]
Length = 253
Score = 35.9 bits (80), Expect = 5.7, Method: Composition-based stats.
Identities = 27/245 (11%), Positives = 60/245 (24%), Gaps = 14/245 (5%)
Query: 28 FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87
S+ + +G S R + V + + A+ +++ Q++ +A +
Sbjct: 9 ISLLLVLALGACSTSYRPSRAEKANQVSNIKT--QLAMEYMRGQDYRQATASIEDALKSD 66
Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI------TQYPESKNVDYVYYLVGMSY 141
P +A K Q++ +
Sbjct: 67 PKNELAWLVRAEIYQYLKVNDKAQESFRQALSIKPDSAEINNNYGWFLCGRLNRPAESMA 126
Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
+ + + + Q E+ R +
Sbjct: 127 YFDKALADPTYPTPYIANLNKGICSAKQGQFGLAEAYLKRSLAAQPQFPPAFKELARTKM 186
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV--EAYVALALMDEAREVVSLIQERYPQ 259
G+ A F+ Y +A L+ + AL A E + +Q +P
Sbjct: 187 LAGQLGDADYYFK----KYQSRVEVLQADDLLLGWKIAKALGNAQAAYEYEAQLQANFPY 242
Query: 260 GYWAR 264
+
Sbjct: 243 SEELQ 247
>gi|87307384|ref|ZP_01089529.1| hypothetical protein DSM3645_17715 [Blastopirellula marina DSM
3645]
gi|87290124|gb|EAQ82013.1| hypothetical protein DSM3645_17715 [Blastopirellula marina DSM
3645]
Length = 842
Score = 35.9 bits (80), Expect = 5.7, Method: Composition-based stats.
Identities = 21/187 (11%), Positives = 47/187 (25%), Gaps = 3/187 (1%)
Query: 65 VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY 124
FL+++ F A E + F + + + A + +
Sbjct: 402 EQFLEKKQFQNAVEIAQALTPPF---PHDQSLQTEGDILVRWGETILEQAKVAKLAEADL 458
Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184
+ + + +L + I + +
Sbjct: 459 LRKEARERFRSAGRIYERLAAERFSSRSYTEELWKSADAYIDGQDYTKAIDMLDMYSQYE 518
Query: 185 GRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244
R++ V R + A+ L Y +A EAY+ + +
Sbjct: 519 ERSRQPRALVAKSRALISLDRADDALDLIHECLDFYPRDPVIYDARLLASEAYLEMGDVT 578
Query: 245 EAREVVS 251
A E++
Sbjct: 579 LAEEMLQ 585
>gi|332711805|ref|ZP_08431736.1| glycosyltransferase [Lyngbya majuscula 3L]
gi|332349783|gb|EGJ29392.1| glycosyltransferase [Lyngbya majuscula 3L]
Length = 694
Score = 35.9 bits (80), Expect = 5.8, Method: Composition-based stats.
Identities = 24/209 (11%), Positives = 53/209 (25%), Gaps = 20/209 (9%)
Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
+Y +L + + A E+FN P + A SL
Sbjct: 35 PNQPDALYGLGMLAQQVGKYQTAEEFFNTTLLVNPESFKAWFSLGN-------------- 80
Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
+ +++ E+ ++ Q + + + +E N
Sbjct: 81 LRQAQGQLSEAVEAYQRALALQPNSVALYNNFGYALQQQGKWENAIACYQKALEIQPNCA 140
Query: 174 YVKGARFYVTVGRNQ-LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM-- 230
+ Q K+ G + +A Y A + +
Sbjct: 141 EADVNLGNALYAQGQLSQEKQAYYAALNHDLGVTRKIGGDVKTAVAYYQKAIAIQPDLVN 200
Query: 231 --ARLVEAYVALALMDEA-REVVSLIQER 256
L A +D+A ++++
Sbjct: 201 SHYTLGVALQEQGKLDDAIASYNNVLKLN 229
>gi|298374133|ref|ZP_06984091.1| TPR domain protein [Bacteroides sp. 3_1_19]
gi|298268501|gb|EFI10156.1| TPR domain protein [Bacteroides sp. 3_1_19]
Length = 1186
Score = 35.9 bits (80), Expect = 5.8, Method: Composition-based stats.
Identities = 20/194 (10%), Positives = 47/194 (24%), Gaps = 1/194 (0%)
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
Y Q + ++ + K + + E + D + L
Sbjct: 575 YLQQLPFTQEDIDASNIIIIDGLYNMAMIYKDKLEDIPLSVEAFENLERRFPDNEHRLES 634
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
++ + + + V + + + +
Sbjct: 635 YYQVYLMALKTGNTALATEYKNKLMNAFPESDYAVAVADPNYEYNIRMMDVVQDSIYQAT 694
Query: 199 YYLKRGEYVA-AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
Y A F+ V Y A + M +YV + + + + E+Y
Sbjct: 695 YDRYLESDTAYVRKSFRYVSEKYPLATLMPKFMFLDALSYVQAGDAEGFKNALKALVEKY 754
Query: 258 PQGYWARYVETLVK 271
P ++K
Sbjct: 755 PNADVTELAGEMLK 768
>gi|256838586|ref|ZP_05544096.1| TPR domain-containing protein [Parabacteroides sp. D13]
gi|256739505|gb|EEU52829.1| TPR domain-containing protein [Parabacteroides sp. D13]
Length = 1186
Score = 35.9 bits (80), Expect = 5.8, Method: Composition-based stats.
Identities = 20/194 (10%), Positives = 47/194 (24%), Gaps = 1/194 (0%)
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
Y Q + ++ + K + + E + D + L
Sbjct: 575 YLQQLPFTQEDIDASNIIIIDGLYNMAMIYKDKLEDIPLSVEAFENLERRFPDNEHRLES 634
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
++ + + + V + + + +
Sbjct: 635 YYQVYLMALKTGNTALATEYKNKLMNAFPESDYAVAVADPNYEYNIRMMDVVQDSIYQAT 694
Query: 199 YYLKRGEYVA-AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
Y A F+ V Y A + M +YV + + + + E+Y
Sbjct: 695 YDRYLESDTAYVRKSFRYVSEKYPLATLMPKFMFLDALSYVQAGDAEGFKNALKALVEKY 754
Query: 258 PQGYWARYVETLVK 271
P ++K
Sbjct: 755 PNADVTELAGEMLK 768
>gi|228919120|ref|ZP_04082497.1| hypothetical protein bthur0011_1540 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|228840524|gb|EEM85788.1| hypothetical protein bthur0011_1540 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
Length = 254
Score = 35.9 bits (80), Expect = 5.8, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 22/59 (37%), Gaps = 5/59 (8%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV-----YEKAVLFLKEQN 72
+ K L +AV VG + ++ V+ ++E+ + KA K +
Sbjct: 1 MKKLILISSLVLAVGLGVGCSNEKTKKTDEPKKEAVQKEKELTAKDVFNKANEVFKNEE 59
>gi|260823860|ref|XP_002606886.1| hypothetical protein BRAFLDRAFT_60331 [Branchiostoma floridae]
gi|229292231|gb|EEN62896.1| hypothetical protein BRAFLDRAFT_60331 [Branchiostoma floridae]
Length = 556
Score = 35.9 bits (80), Expect = 5.8, Method: Composition-based stats.
Identities = 16/195 (8%), Positives = 50/195 (25%), Gaps = 8/195 (4%)
Query: 66 LFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP 125
+L ++++ A + + AF + + + +P
Sbjct: 33 DYLTNRDYTGAITLLEFNRSSGKGSEEVDMWIAYCAFHLGEYKRAMEEYQSMTKRDGCHP 92
Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
+ Y + ++ + ++ + +
Sbjct: 93 DVWVNLACCDFFLGMYKEADEAAQKSPKSRLQNRLLFHLSHKFNDEKRLMQYHQNLQDII 152
Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
+QL+ + R + + + + + Y L D
Sbjct: 153 EDQLSLASIHYLRSHYQEAIDIYKRILLDNRDYLALN--------VYVALCYYKLDYYDV 204
Query: 246 AREVVSLIQERYPQG 260
++EV+++ + YP
Sbjct: 205 SQEVLAVYLQHYPDS 219
>gi|194335812|ref|YP_002017606.1| Tetratricopeptide TPR_2 repeat protein [Pelodictyon
phaeoclathratiforme BU-1]
gi|194308289|gb|ACF42989.1| Tetratricopeptide TPR_2 repeat protein [Pelodictyon
phaeoclathratiforme BU-1]
Length = 577
Score = 35.9 bits (80), Expect = 5.8, Method: Composition-based stats.
Identities = 21/239 (8%), Positives = 53/239 (22%), Gaps = 1/239 (0%)
Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQ-REVYEKAVLFLKEQNFSKAYEYFN 81
L + +V G V + + A L + ++ +A E +
Sbjct: 21 FLHMAAISSVLLFSGCASSKPVLSGSTVPDSVVEASKREFVAASLKSAKGDYREAVERYR 80
Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
+ D P +L + + + + Y
Sbjct: 81 KLLHDQPSNAAIHYALSKAWVALGVPDSARLYSEKSVLLNPRNKYYTAFLAFLSHQMHDY 140
Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
+ + ++ + Y + + + E + +
Sbjct: 141 GRAAELYRQLAVLDPGSTEPLTSLALEYLAVDQPEKSLAVFQEILARDPKNEDALVQMLF 200
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
+ V ++ E+ L E Y+ A + + P
Sbjct: 201 VEIKLTHYQEAIATVKELIGQSDSKEKLHLTLGELYLQTRQYGLASRTFRELLKSNPGS 259
>gi|47940054|gb|AAH71516.1| FK506 binding protein 4 [Danio rerio]
Length = 450
Score = 35.9 bits (80), Expect = 5.8, Method: Composition-based stats.
Identities = 25/191 (13%), Positives = 49/191 (25%), Gaps = 5/191 (2%)
Query: 74 SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
KA + Q + + + + ES ++ +
Sbjct: 200 EKALQAMEQGEEALFTIKPKYGFGTAGSEKYNIPPNATLQYKIKMKAFEKAKESWEMNTI 259
Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
L + + + K + RIV + A +
Sbjct: 260 EKLEQSVIVKEKGTQYFKEGKYKQAIVQYKRIVSWLE-----HESSMQPDDEEKAKALRL 314
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+ + A P + + E+A+ R EA V + D A+ +
Sbjct: 315 AAYLNLAMCYLKLQDANPALENCDKALELDANNEKALFRRGEALVVMKEFDMAKVDFQRV 374
Query: 254 QERYPQGYWAR 264
E YP A+
Sbjct: 375 IELYPANKAAK 385
>gi|308208140|gb|ADO20319.1| P58IPK [Sus scrofa]
Length = 505
Score = 35.9 bits (80), Expect = 5.8, Method: Composition-based stats.
Identities = 22/258 (8%), Positives = 67/258 (25%), Gaps = 20/258 (7%)
Query: 34 FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93
L ++ + + + +A+ + +++ A + ++ +
Sbjct: 131 VLKSNPSENEEKEAQSQLIKSDEMQRLRSQALDAFESSDYTAAITFLDKILEVCVWDAEL 190
Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153
R+ + K + E+ Y + + +V +
Sbjct: 191 RELRAECFIKEGEPRKAISDLKAASKLKNDNTEAFYKISTLYYQLGDHELSLSEVRECLK 250
Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK----------- 202
+ + + + + ++ A + GR A + E
Sbjct: 251 LDQDHKRCFAHYKQVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPNVAEYTIRSKE 310
Query: 203 -----RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA-REVVSLIQER 256
+ + ++ A+ EAY+ + DEA ++ + +
Sbjct: 311 RICHCFSKDEKPVEAIRVCSEVLQVEPDNVNALKDRAEAYLVEEMYDEAIQDYETAQEHN 370
Query: 257 YPQGYWA---RYVETLVK 271
+ L+K
Sbjct: 371 ENDQQIREGLEKAQRLLK 388
>gi|300868209|ref|ZP_07112841.1| putative Glycosyl transferase, family 2 [Oscillatoria sp. PCC 6506]
gi|300333833|emb|CBN58025.1| putative Glycosyl transferase, family 2 [Oscillatoria sp. PCC 6506]
Length = 1545
Score = 35.9 bits (80), Expect = 5.8, Method: Composition-based stats.
Identities = 24/204 (11%), Positives = 53/204 (25%), Gaps = 6/204 (2%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
A +K + + +A + + P + +L + + +A + +
Sbjct: 503 NLADALMKLEQWEEAVPAYLSAIKLNPDHSWSHNNLGDALVKLERWEEAAEAYAGANQAK 562
Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK---GA 178
+ S+N + + + S + E + A
Sbjct: 563 NDFFWSQNNLADALMKLERWEEAAAAYQQAIELNADHFGTHSNLAEALVKLEDWEGAIAA 622
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
+G ++ + ++P ++ L D A L +A
Sbjct: 623 YRRAIELNPDFFWSHNNLGDALIELERWEESVPVYRRALELNPDFAW---AHYNLGQALE 679
Query: 239 ALALMDEAREVVSLIQERYPQGYW 262
DEA E P W
Sbjct: 680 HQEEWDEAIASYRRAAEIQPDLPW 703
>gi|296109346|ref|YP_003616295.1| TPR repeat-containing protein [Methanocaldococcus infernus ME]
gi|295434160|gb|ADG13331.1| TPR repeat-containing protein [Methanocaldococcus infernus ME]
Length = 534
Score = 35.9 bits (80), Expect = 5.8, Method: Composition-based stats.
Identities = 21/143 (14%), Positives = 39/143 (27%)
Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
D Y KA K + + KA E F++ + P A S + K +
Sbjct: 67 DPNNPAAWYYKADSLYKLERYEKAIECFDKAIKLDPNNPAAWYYKADSLYKLERYEKAIE 126
Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
+ P + + + + + K ++ +++E N
Sbjct: 127 CFDKAIKLDPNNPAAWYYKGIILAKLGKHEEESKKYEKALDKYKEAIECFKKVLEIDPNF 186
Query: 173 PYVKGARFYVTVGRNQLAAKEVE 195
F R K E
Sbjct: 187 YSPLIYIFKYLKQRLYSKEKIDE 209
>gi|226310316|ref|YP_002770210.1| hypothetical protein BBR47_07290 [Brevibacillus brevis NBRC 100599]
gi|226093264|dbj|BAH41706.1| hypothetical protein [Brevibacillus brevis NBRC 100599]
Length = 731
Score = 35.9 bits (80), Expect = 5.8, Method: Composition-based stats.
Identities = 27/212 (12%), Positives = 62/212 (29%), Gaps = 5/212 (2%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
++ +++ + + + + + ++ S + + S
Sbjct: 270 TSEKSASEALFKAVSYSINMGFYDATIDMSLRGRKLMNWSSEFDNSRYFTMKMATSLAAL 329
Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
+ + Y + D+ ++ M + +R + +++ + ++
Sbjct: 330 GETDDIPTLLGEVYANTD--DFRVHMQISYGFSMYYTRHHREREHEKAREWIQKAIDLAE 387
Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
K F +N LA E+ + R LA H +
Sbjct: 388 WIEDEKERAFQQVFNQNGLALVELHMDNPEEALRLVTEGWQRLNQDLAPDEHMLHRSVLL 447
Query: 231 ARLVEAYVALALMDEAREVVS---LIQERYPQ 259
YVAL +EA E S I YP+
Sbjct: 448 HNKGLIYVALKRFEEAAETFSQVIQIDSNYPE 479
>gi|119357636|ref|YP_912280.1| TPR repeat-containing protein [Chlorobium phaeobacteroides DSM 266]
gi|119354985|gb|ABL65856.1| TPR repeat-containing protein [Chlorobium phaeobacteroides DSM 266]
Length = 3560
Score = 35.9 bits (80), Expect = 5.8, Method: Composition-based stats.
Identities = 25/192 (13%), Positives = 52/192 (27%), Gaps = 8/192 (4%)
Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
A + + F KA F+Q P + + + + ++
Sbjct: 56 ATIAAQRHEFEKAVTLFDQVIHINPVHPGSLNNRGNALKALQRYEEALESYEKAIAIKPD 115
Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
Y ++ + V M Y + + + Y
Sbjct: 116 YADAYSNRSVVLKELMRYEEALASYEKAIAIN----PDFAEAYYNRAVIFYDSDRYEEAL 171
Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA----EEAMARLVEAYVA 239
++ + + Y RG + R++ L +Y A +EA + A +
Sbjct: 172 ASYDRAIVLKPDYVEAYANRGNVYLKLKRYEDALGSYKKAIALKLECDEAYYNMGNALLE 231
Query: 240 LALMDEAREVVS 251
L +EA
Sbjct: 232 LQRYEEALASYE 243
>gi|326914341|ref|XP_003203484.1| PREDICTED: intraflagellar transport protein 88 homolog [Meleagris
gallopavo]
Length = 818
Score = 35.9 bits (80), Expect = 5.9, Method: Composition-based stats.
Identities = 26/223 (11%), Positives = 57/223 (25%), Gaps = 28/223 (12%)
Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
+D + K +++ KA E++ + R+ A
Sbjct: 480 SDRYNPAALTNKGNTVFANEDYEKAAEFYKEALRND--------------CSCTEALYNL 525
Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
+ + + I D+ ++++ +++
Sbjct: 526 GLTYKKLNRTDEALDCFLKLHAILGNSAQVLHQIADIYEIMEDPNQAIEWLMQLISVVPT 585
Query: 172 SPYV--KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY--SDAEHAE 227
P+V K + Y G A Y V + + E+ E
Sbjct: 586 DPHVLSKLGKLYDNEGDKSQAFHYYYESYRYFPSNIEVIEWLGAYCIDTQFCEKAIEYFE 645
Query: 228 EAMARL----------VEAYVALALMDEAREVVSLIQERYPQG 260
A L Y +A E +I +++P+
Sbjct: 646 RAALILPTQVKWQLMVASCYRRSGNYQKALEKYKVIHQKFPEN 688
>gi|301307732|ref|ZP_07213689.1| TPR domain protein [Bacteroides sp. 20_3]
gi|300834406|gb|EFK65019.1| TPR domain protein [Bacteroides sp. 20_3]
Length = 1186
Score = 35.9 bits (80), Expect = 5.9, Method: Composition-based stats.
Identities = 20/194 (10%), Positives = 47/194 (24%), Gaps = 1/194 (0%)
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
Y Q + ++ + K + + E + D + L
Sbjct: 575 YLQQLPFTQEDIDASNIIIIDGLYNMAMIYKDKLEDIPLSVEAFENLERRFPDNEHRLES 634
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
++ + + + V + + + +
Sbjct: 635 YYQVYLMALKTGNTALATEYKNKLMNAFPESDYAVAVADPNYEYNIRMMDVVQDSIYQAT 694
Query: 199 YYLKRGEYVA-AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
Y A F+ V Y A + M +YV + + + + E+Y
Sbjct: 695 YDRYLESDTAYVRKSFRYVSEKYPLATLMPKFMFLDALSYVQAGDAEGFKNALKALVEKY 754
Query: 258 PQGYWARYVETLVK 271
P ++K
Sbjct: 755 PNADVTELAGEMLK 768
>gi|209524105|ref|ZP_03272656.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira maxima CS-328]
gi|209495480|gb|EDZ95784.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira maxima CS-328]
Length = 1676
Score = 35.9 bits (80), Expect = 5.9, Method: Composition-based stats.
Identities = 23/220 (10%), Positives = 48/220 (21%), Gaps = 4/220 (1%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
++ + L+E+ F +A Q P A L + +
Sbjct: 903 PQAPEEPPSDMVAQVEANLQEKQFQQALSLCQQALALDPEAANIYPLLGKALLGLKRLSE 962
Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQM---IRDVPYDQRATKLMLQYMSRIV 166
A + Y + Q Q + + ++
Sbjct: 963 AVAAFEKAVQLNPADATIHTNLGSLYAQMQRWEQAVKCYERAIALQPNLVAAHRNLGKVW 1022
Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
++ R+ + + + + H
Sbjct: 1023 QKLGQPQQALSCRYQALILQPDQGEASEFLAVGNSLLQGGRLQEAEVCY-RQVVRRSPHD 1081
Query: 227 EEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
+A L E A L +A E P + +R
Sbjct: 1082 SQAYHNLGEVLSAQGLWSQAEAAYRRAVELQPDSFESRNS 1121
>gi|332525606|ref|ZP_08401761.1| putative transmembrane protein [Rubrivivax benzoatilyticus JA2]
gi|332109171|gb|EGJ10094.1| putative transmembrane protein [Rubrivivax benzoatilyticus JA2]
Length = 247
Score = 35.9 bits (80), Expect = 5.9, Method: Composition-based stats.
Identities = 15/69 (21%), Positives = 25/69 (36%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+G R +Y AI F+ +A A EA+ L + AR +
Sbjct: 166 RFWLGNAQYGRRDYKGAIASFRAFVAAAPQHPRAPEALLALANSQAEAKDTRAARRTIDE 225
Query: 253 IQERYPQGY 261
+ + YP+
Sbjct: 226 LLKTYPKSE 234
>gi|304409846|ref|ZP_07391466.1| tol-pal system protein YbgF [Shewanella baltica OS183]
gi|307304202|ref|ZP_07583955.1| tol-pal system protein YbgF [Shewanella baltica BA175]
gi|304352364|gb|EFM16762.1| tol-pal system protein YbgF [Shewanella baltica OS183]
gi|306913100|gb|EFN43523.1| tol-pal system protein YbgF [Shewanella baltica BA175]
Length = 249
Score = 35.9 bits (80), Expect = 5.9, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 33/79 (41%), Gaps = 2/79 (2%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
LK +Y AIP F+ + Y D+ +A A L + + EA++
Sbjct: 130 YESAVNLVLKERKYDDAIPAFRAFIKQYPDSVYAANANYWLGQLLFNKSEFAEAKQAFKT 189
Query: 253 IQERYPQGYWARYVETLVK 271
+ +R+ + ++LVK
Sbjct: 190 VVDRFSDSN--KRGDSLVK 206
>gi|261380376|ref|ZP_05984949.1| HemY family protein [Neisseria subflava NJ9703]
gi|284796901|gb|EFC52248.1| HemY family protein [Neisseria subflava NJ9703]
Length = 407
Score = 35.9 bits (80), Expect = 5.9, Method: Composition-based stats.
Identities = 40/279 (14%), Positives = 80/279 (28%), Gaps = 11/279 (3%)
Query: 1 MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV 60
+ V+ + + A+ L + F+ G +R R
Sbjct: 28 VYVVVEQTMLRINLHAFVLGLLLSVFVLYFLIKFVFGLLNIPARMQRFGIARKGRQASAS 87
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
A L E F KA + + ++ +L++ A ++ E
Sbjct: 88 LNSAGLAYFEGRFEKAEQEAAKVLQNKEAGDNRTLALMLGAHAADQMENFELRDRYLHEI 147
Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK---- 176
+ + ++ + V + A + +SR+V +
Sbjct: 148 EHLPQKQQLSRHLLLAESALGCRDYPTVAQNLEAAAKINGNLSRLVRLQLRYAFDHGDAS 207
Query: 177 GARFYVTVGRNQLAAKEVEIGRY----YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232
A + E +Y Y + V R + L ++ + E
Sbjct: 208 DVLAKAEKLVKAGAINDYEAEQYQNWAYRRLLSEVTDAGRLKACLKQIPESVKSGELCVA 267
Query: 233 LVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+ E Y L L EA + ++ YPQ +E V+
Sbjct: 268 IAEKYERLGLYAEAVKW---VKNHYPQNRQPELLEAFVE 303
>gi|116327132|ref|YP_796852.1| TPR repeat-containing protein [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116332211|ref|YP_801929.1| TPR repeat-containing protein [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
gi|116119876|gb|ABJ77919.1| Conserved hypothetical protein with tetratricopeptide repeat domain
[Leptospira borgpetersenii serovar Hardjo-bovis L550]
gi|116125900|gb|ABJ77171.1| Conserved hypothetical protein with tetratricopeptide repeat domain
[Leptospira borgpetersenii serovar Hardjo-bovis JB197]
Length = 378
Score = 35.9 bits (80), Expect = 5.9, Method: Composition-based stats.
Identities = 20/215 (9%), Positives = 55/215 (25%), Gaps = 25/215 (11%)
Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
A ++K+ N+ + + + + K+ + GK A + ++Y
Sbjct: 159 ADYYMKKGNYDLSRKNYVLALQ---EDPENVKARVRWGKSLRRMGKDWSAYDVYDDYAQA 215
Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
S Y ++ + + +E
Sbjct: 216 GFYFDPEKEKVTSEFRSGILEKARQLYVRKQYYGAIDTFKKALEM--------------- 260
Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243
+ + + + + ++ + D + A+ R Y
Sbjct: 261 GISPKAEEQALFYIAESYEAVGKSDSALQYLNRVLGNQDGSLDQTALFRKGTIYFKSGKY 320
Query: 244 DEAREVVSLIQERYPQGY-------WARYVETLVK 271
++A + +RYP W + ++
Sbjct: 321 EKAAALFQEASDRYPDSPVGRKASAWKKESLDQIE 355
>gi|41393101|ref|NP_958877.1| peptidyl-prolyl cis-trans isomerase FKBP4 [Danio rerio]
gi|28279562|gb|AAH45387.1| FK506 binding protein 4 [Danio rerio]
gi|182891952|gb|AAI65584.1| Fkbp4 protein [Danio rerio]
Length = 449
Score = 35.9 bits (80), Expect = 5.9, Method: Composition-based stats.
Identities = 25/191 (13%), Positives = 49/191 (25%), Gaps = 5/191 (2%)
Query: 74 SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
KA + Q + + + + ES ++ +
Sbjct: 200 EKALQAMEQGEEALFTIKPKYGFGTAGSEKYNIPPNATLQYKIKMKAFEKAKESWEMNTI 259
Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
L + + + K + RIV + A +
Sbjct: 260 EKLEQSVIVKEKGTQYFKEGKYKQAIVQYKRIVSWLE-----HESSMQPDDEEKAKALRL 314
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+ + A P + + E+A+ R EA V + D A+ +
Sbjct: 315 AAYLNLAMCYLKLQDANPALENCDKALELDANNEKALFRRGEALVVMKEFDMAKVDFQRV 374
Query: 254 QERYPQGYWAR 264
E YP A+
Sbjct: 375 IELYPANKAAK 385
>gi|47211505|emb|CAF94124.1| unnamed protein product [Tetraodon nigroviridis]
Length = 783
Score = 35.9 bits (80), Expect = 5.9, Method: Composition-based stats.
Identities = 25/220 (11%), Positives = 54/220 (24%), Gaps = 16/220 (7%)
Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
T + Y A +A +++ R +P A +L A Y
Sbjct: 387 TLPHNAKVHYNYANFLKDSGQLQEAIRHYSTALRLYPQHASAMNNLGTLTQSPEEAESYY 446
Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
+ A + + + +++D + ++ +
Sbjct: 447 RKALAINPQHNRALFNLGNLFKSQGKEKEAESLLKDSIHFGPHFANAYSSLASLYAEQKR 506
Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231
K + + G + + GE A+ +Q + + AM
Sbjct: 507 FFEAKEVYLKGIEKCPENSDLHNNYGVFLVDTGEDERAVDHYQQAIRLKP-THYI--AMV 563
Query: 232 RLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
L EA +W + + K
Sbjct: 564 NLGRLLRLNNKNQEAE-------------FWYKRALRVTK 590
>gi|51246504|ref|YP_066388.1| hypothetical protein DP2652 [Desulfotalea psychrophila LSv54]
gi|50877541|emb|CAG37381.1| unknown protein [Desulfotalea psychrophila LSv54]
Length = 804
Score = 35.9 bits (80), Expect = 5.9, Method: Composition-based stats.
Identities = 21/211 (9%), Positives = 52/211 (24%), Gaps = 6/211 (2%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS--LLMSAFVQYSAGKYQQAASLGEE 119
E A + + KA++ F + P + + +
Sbjct: 587 ELAKAYYALGLYQKAHQVFLYLLTNGPSHNETIYLPLIHSAYYAGAYIRVTDYCRRYQIF 646
Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
Y + Y+ + + + + N Y K
Sbjct: 647 YPEGKDYREIRLYMCKALLALGRNVAALQNLPDPLPQSAAAQKIATKVFFYNGLYQKVLD 706
Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
N + + + + L + + +++ R E +
Sbjct: 707 LAKKRTNNFPESLFFQAESLWQLGNR----STAYSLFQQIEKTSMYNGQSLYRQAEFLLQ 762
Query: 240 LALMDEAREVVSLIQERYPQGYWARYVETLV 270
+ AR V+ + E + WA+ + +
Sbjct: 763 NNQENRARRVLQQLTEDASETSWAKLAQQEL 793
>gi|27807457|ref|NP_777181.1| dnaJ homolog subfamily C member 3 precursor [Bos taurus]
gi|73620802|sp|Q27968|DNJC3_BOVIN RecName: Full=DnaJ homolog subfamily C member 3; AltName:
Full=Interferon-induced, double-stranded RNA-activated
protein kinase inhibitor; AltName: Full=Protein kinase
inhibitor of 58 kDa; Short=Protein kinase inhibitor p58;
Flags: Precursor
gi|468012|gb|AAA17795.1| PKR inhibitor P58 [Bos taurus]
Length = 504
Score = 35.9 bits (80), Expect = 5.9, Method: Composition-based stats.
Identities = 23/258 (8%), Positives = 67/258 (25%), Gaps = 20/258 (7%)
Query: 34 FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93
L ++ + + + +A+ + +F+ A + ++ +
Sbjct: 131 VLKSNPSENEEKEAQSQLVKSDEMQRLRSQALDAFESSDFTAAITFLDKILEVCVWDAEL 190
Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153
R+ + K + E+ Y + + +V +
Sbjct: 191 RELRAECFIKEGEPRKAISDLKASSKLKNDNTEAFYKISTLYYELGDHELSLSEVRECLK 250
Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK----------- 202
+ + + + + ++ A + GR A + E
Sbjct: 251 LDQDHKRCFAHYKQVKKLNKLIESAEELIKEGRYTDAISKYESVMKTEPGVHEYTIRSKE 310
Query: 203 -----RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA-REVVSLIQER 256
+ + ++ A+ EAY+ + DEA ++ + +
Sbjct: 311 RICHCFSKDEKPVEAIRVCSEVLQVEPDNVNALKDRAEAYLIEEMYDEAIQDYETAQEHN 370
Query: 257 YPQGYWA---RYVETLVK 271
+ L+K
Sbjct: 371 ENDQQIREGLEKAQRLLK 388
>gi|332840993|ref|XP_001147729.2| PREDICTED: intraflagellar transport protein 88 homolog isoform 4
[Pan troglodytes]
Length = 833
Score = 35.9 bits (80), Expect = 6.0, Method: Composition-based stats.
Identities = 21/193 (10%), Positives = 54/193 (27%), Gaps = 7/193 (3%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
KAV +L+++++++A E + A + L + + + +
Sbjct: 429 NKAVTYLRQKDYNQAVEILKVLEKKDSRVKSAAATNLSALYYMGKDFAQASSYADIAVNS 488
Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVP----YDQRATKLMLQYMSRIVERYTNSPYVKG 177
+Y + + + + + + + L + E+
Sbjct: 489 DRYNPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNRLDEALD 548
Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
+ A +I Y AI V++ +++L E Y
Sbjct: 549 CFLKLHAILRNSAEVLYQIANIYELMENPSQAIEWLMQVVSVIPTDPQV---LSKLGELY 605
Query: 238 VALALMDEAREVV 250
+A +
Sbjct: 606 DREGDKSQAFQYY 618
>gi|332661980|ref|YP_004451449.1| sulfatase-modifying factor protein [Haliscomenobacter hydrossis DSM
1100]
gi|332337477|gb|AEE54576.1| Sulphatase-modifying factor protein [Haliscomenobacter hydrossis
DSM 1100]
Length = 655
Score = 35.9 bits (80), Expect = 6.0, Method: Composition-based stats.
Identities = 13/80 (16%), Positives = 28/80 (35%), Gaps = 5/80 (6%)
Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
E + +R I + Y +++++ A+ L + D+ +
Sbjct: 302 EYEQMAWERALATNTIKAYTDFHDKYPRSKYSDLALDAL-DILEEKEEWDKVTKTRQAPL 360
Query: 255 ERY----PQGYWARYVETLV 270
RY PQ + + + LV
Sbjct: 361 LRYIQLNPQSPYLKEAQRLV 380
>gi|296481652|gb|DAA23767.1| dnaJ homolog subfamily C member 3 precursor [Bos taurus]
Length = 504
Score = 35.9 bits (80), Expect = 6.0, Method: Composition-based stats.
Identities = 23/258 (8%), Positives = 67/258 (25%), Gaps = 20/258 (7%)
Query: 34 FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93
L ++ + + + +A+ + +F+ A + ++ +
Sbjct: 131 VLKSNPSENEEKEAQSQLVKSDEMQRLRSQALDAFESSDFTAAITFLDKILEVCVWDAEL 190
Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153
R+ + K + E+ Y + + +V +
Sbjct: 191 RELRAECFIKEGEPRKAISDLKASSKLKNDNTEAFYKISTLYYELGDHELSLSEVRECLK 250
Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK----------- 202
+ + + + + ++ A + GR A + E
Sbjct: 251 LDQDHKRCFAHYKQVKKLNKLIESAEELIKEGRYTDAISKYESVMKTEPGVHEYTIRSKE 310
Query: 203 -----RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA-REVVSLIQER 256
+ + ++ A+ EAY+ + DEA ++ + +
Sbjct: 311 RICHCFSKDEKPVEAIRVCSEVLQVEPDNVNALKDRAEAYLIEEMYDEAIQDYETAQEHN 370
Query: 257 YPQGYWA---RYVETLVK 271
+ L+K
Sbjct: 371 ENDQQIREGLEKAQRLLK 388
>gi|300770365|ref|ZP_07080244.1| possible two component sensor histidine kinase [Sphingobacterium
spiritivorum ATCC 33861]
gi|300762841|gb|EFK59658.1| possible two component sensor histidine kinase [Sphingobacterium
spiritivorum ATCC 33861]
Length = 637
Score = 35.9 bits (80), Expect = 6.0, Method: Composition-based stats.
Identities = 23/254 (9%), Positives = 70/254 (27%), Gaps = 15/254 (5%)
Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEK--AVLFLKEQNFSK 75
+ + A IF +++ F+ ++ + + Q++ A+ L + K
Sbjct: 1 MIARKAYFIFLILSLLFVFSCRQKEESRQDEKVIANAIPQKDYLSLIIAMDTLSSLEYKK 60
Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN------ 129
+ A + A E+ + +
Sbjct: 61 VVKREYDLLNHSADTANNPFYHYFKARMYMQDKLRDSALMEYEKMTGKSTDDDIELLKKV 120
Query: 130 ---VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
+ V +S + M + + + + + +++ R + + +
Sbjct: 121 NILDYTINNGVTVSASVMKKILNALEASERQHSRFIYRFYDLLAKAYFQNDNEKESLGYA 180
Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA----L 242
+ K +++ Y + + + +A + +LA
Sbjct: 181 ERYYEKHPYKSHPVIEQRYYDISFLLASGLGDFEKMKLYNNKARKLAKSIHDSLAIARTY 240
Query: 243 MDEAREVVSLIQER 256
+EA+ V ++
Sbjct: 241 DNEAQVYVRQMKYD 254
>gi|332260278|ref|XP_003279214.1| PREDICTED: intraflagellar transport protein 88 homolog isoform 3
[Nomascus leucogenys]
Length = 804
Score = 35.9 bits (80), Expect = 6.0, Method: Composition-based stats.
Identities = 21/193 (10%), Positives = 54/193 (27%), Gaps = 7/193 (3%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
KAV +L+++++++A E + A + L + + + +
Sbjct: 401 NKAVTYLRQKDYNQAVEILKMLEKKDSRVKSAAATNLSALYYMGKDFAQASSYADIAVNS 460
Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVP----YDQRATKLMLQYMSRIVERYTNSPYVKG 177
+Y + + + + + + + L + E+
Sbjct: 461 DRYNPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNRLDEALD 520
Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
+ A +I Y AI V++ +++L E Y
Sbjct: 521 CFLKLHAILRNSAEVLYQIANIYELMENPSQAIEWLMQVVSVIPTDPQV---LSKLGELY 577
Query: 238 VALALMDEAREVV 250
+A +
Sbjct: 578 DREGDKSQAFQYY 590
>gi|260909806|ref|ZP_05916498.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str.
F0295]
gi|260636037|gb|EEX54035.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str.
F0295]
Length = 540
Score = 35.9 bits (80), Expect = 6.0, Method: Composition-based stats.
Identities = 16/202 (7%), Positives = 52/202 (25%), Gaps = 3/202 (1%)
Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
+ Y++A + + Y ++ + + M + + + +Q +
Sbjct: 238 MDKAYQEAKQLVDRNTYPLIAPYTSKLNSEGKITPSEDAFAQMWFYDKGTEQIWQPYVAK 297
Query: 117 GEEYITQY--PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY 174
E T + Y+ ++ T+ ++ + + +
Sbjct: 298 ENEVPTVTSLYGADLSTTTYWDEAKQSNKVGDYNKPPYVPTREVINDLFASQTDHRAQVH 357
Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA-IPRFQLVLANYSDAEHAEEAMARL 233
+ V V + + + E +
Sbjct: 358 FEFVNTTVNDKNVSTQLYVVSKFKGNPNYATLTSTHWGGYVPNGNQAPKPFRIAEQYLIV 417
Query: 234 VEAYVALALMDEAREVVSLIQE 255
EA L +A+ ++ +++
Sbjct: 418 AEAAYKLGNTADAQTYLNTLRQ 439
>gi|260173057|ref|ZP_05759469.1| hypothetical protein BacD2_14393 [Bacteroides sp. D2]
gi|315921334|ref|ZP_07917574.1| conserved hypothetical protein [Bacteroides sp. D2]
gi|313695209|gb|EFS32044.1| conserved hypothetical protein [Bacteroides sp. D2]
Length = 625
Score = 35.9 bits (80), Expect = 6.0, Method: Composition-based stats.
Identities = 6/42 (14%), Positives = 12/42 (28%)
Query: 14 AWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVR 55
Y++ K ++ LVG + D +
Sbjct: 1 MKNYKILKNIYICLALLSTVLLVGCSKSDENPTPDDPQPSGK 42
>gi|193785201|dbj|BAG54354.1| unnamed protein product [Homo sapiens]
Length = 795
Score = 35.9 bits (80), Expect = 6.0, Method: Composition-based stats.
Identities = 21/193 (10%), Positives = 55/193 (28%), Gaps = 7/193 (3%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
KAV +L+++++++A E+ + A + L + + + +
Sbjct: 429 NKAVTYLRQKDYNQAVEFLKVLEKKDNRVKSAAATNLSALYYMGKDFAQASSYADIAVNS 488
Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVP----YDQRATKLMLQYMSRIVERYTNSPYVKG 177
+Y + + + + + + + L + E+
Sbjct: 489 DRYNLAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNRLDEALD 548
Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
+ A +I Y AI V++ +++L E Y
Sbjct: 549 CFLKLHAILRNSAEVLYQIANIYELMENPSQAIEWLMQVVSVIPTDPQV---LSKLGELY 605
Query: 238 VALALMDEAREVV 250
+A +
Sbjct: 606 DREGDKSQAFQYY 618
>gi|168180965|ref|ZP_02615629.1| putative thiosulfate sulfurtransferase [Clostridium botulinum NCTC
2916]
gi|226950025|ref|YP_002805116.1| putative thiosulfate sulfurtransferase [Clostridium botulinum A2
str. Kyoto]
gi|182668355|gb|EDT80334.1| putative thiosulfate sulfurtransferase [Clostridium botulinum NCTC
2916]
gi|226841718|gb|ACO84384.1| putative thiosulfate sulfurtransferase [Clostridium botulinum A2
str. Kyoto]
Length = 324
Score = 35.9 bits (80), Expect = 6.0, Method: Composition-based stats.
Identities = 22/225 (9%), Positives = 52/225 (23%), Gaps = 20/225 (8%)
Query: 18 QLYKFALTIFFSIAVCF------LVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQ 71
++ K F SI +CF G SS Q+E Y+
Sbjct: 2 KMKKNFFKSFSSIILCFVLGVIIFTGCSNSSSNKEETKDKKQETTQKESYK--------- 52
Query: 72 NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
+Y + + Q + D
Sbjct: 53 --DSSYIVGSDWLSKNLNKDNVIIVDARPDKDYKKGHIPGAINVQWPYFTNQEGKPGEKD 110
Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
+ L ++ + + D+ T + ++
Sbjct: 111 WGMLLPEKELSKKLSSLGIDKNKTIVAYAENKSGWGEDGRIIWMLRMVGIENSKMLNGGF 170
Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLAN---YSDAEHAEEAMARL 233
+ + + + F + + Y+D + +E + ++
Sbjct: 171 DYWKNKSLEISKDDVTPKKSDFVVENMDKSMYADTKWVKENLDKI 215
>gi|13324596|gb|AAK18801.1|AF305609_1 LMP1 [Borrelia burgdorferi]
Length = 1173
Score = 35.9 bits (80), Expect = 6.0, Method: Composition-based stats.
Identities = 23/219 (10%), Positives = 60/219 (27%)
Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
+ + Y + Q + Y+ ++ K + + + E F+Q + P A + ++
Sbjct: 814 KAENAYEKIIKLTNTQEDHYKLGIIRFKLKKYEHSIESFDQTIKLDPKHKKALHNKGIAL 873
Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
+ K ++ + Y + + Q K
Sbjct: 874 MMLNKNKKAIESFEKAIQIDKNYGTAYYQKGIAEEKNGDMQQAFASFKNAYNLDKNPNYA 933
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
+ + + + + N E+ I + + E + +
Sbjct: 934 LKAGIVSNNLGNFKQSEEYLNFFNANAKKPNEIAIYNLSIAKFENNKLEESLETINKAID 993
Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
E + + A + SL+ E+ P+
Sbjct: 994 LNPEKSEYLYLKASINLKKENYQNAISLYSLVIEKNPEN 1032
>gi|86143710|ref|ZP_01062086.1| cytoplasmic trehalase [Leeuwenhoekiella blandensis MED217]
gi|85829753|gb|EAQ48215.1| cytoplasmic trehalase [Leeuwenhoekiella blandensis MED217]
Length = 528
Score = 35.9 bits (80), Expect = 6.0, Method: Composition-based stats.
Identities = 26/254 (10%), Positives = 67/254 (26%), Gaps = 10/254 (3%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K F + + F+ + + Y + ++ ++ + +
Sbjct: 1 MIKSYFNFFALLLILFVSSC-KNEQTADTATFPNKNLNPIDRYGELLVAVQTNHVFPDGK 59
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
F C P + + + + E T E+ +
Sbjct: 60 TFVDCEPKMPSEEILEAYKMQKDQPDFDLKAFVLEHFALPETPTSNFEADTSRTTAAHIN 119
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
+ + RD + +++ L + Y + F + + A + I
Sbjct: 120 ALWPYLKRDADAVENGSRIALPNAYIVPGGRFQEVYYWDSYF--ILLGLKEAGEIELIEN 177
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS---LIQE 255
+ I Y A +V + + D+ + +++
Sbjct: 178 ILDNFAYQIDTIGFIPNGNRTYYLGRSQPPFFAEMVN--LLAGIKDDKSVYLKYHDALEK 235
Query: 256 RYPQGYWARYVETL 269
Y +W + E L
Sbjct: 236 EY--AFWMQGAEGL 247
>gi|99078715|ref|YP_611973.1| tetratricopeptide TPR_2 [Ruegeria sp. TM1040]
gi|99035853|gb|ABF62711.1| Tetratricopeptide TPR_2 [Ruegeria sp. TM1040]
Length = 572
Score = 35.9 bits (80), Expect = 6.0, Method: Composition-based stats.
Identities = 27/201 (13%), Positives = 51/201 (25%), Gaps = 6/201 (2%)
Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
+Y KA+ ++ A + F + + Q +
Sbjct: 164 ALYHKALALASVGDYEGADQLFAANEGQLGRSSRRAAIARIQVLSQLGRNDQALEVLVDS 223
Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
P + M P + + + + + S YV
Sbjct: 224 FGEGFDPALTEFADQ---LAMGETLRFSITPTARDGMAEVFYSLGQALSGEAASDYVLMY 280
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
+ + G Y +I ++ V ++ D AE EA
Sbjct: 281 ARMAAKLSPGHVDAVLLSAGLLDQMGRYELSIATYKQVPRDHPDFHAAE---LGRAEALR 337
Query: 239 ALALMDEAREVVSLIQERYPQ 259
A A EV+ + +PQ
Sbjct: 338 RSANPQAAAEVLEQLARDFPQ 358
>gi|329726840|gb|EGG63300.1| NLPA lipoprotein [Staphylococcus epidermidis VCU144]
Length = 270
Score = 35.9 bits (80), Expect = 6.1, Method: Composition-based stats.
Identities = 10/70 (14%), Positives = 20/70 (28%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K I L ++ + E+ EKA LK++ + +
Sbjct: 1 MKKLFGIILVLALTITLAACGGGKDKEKTITVGASPAPHAEILEKAKPLLKKKGYDLKIK 60
Query: 79 YFNQCSRDFP 88
N +
Sbjct: 61 SINDYTTPNK 70
>gi|297484935|ref|XP_002694666.1| PREDICTED: tetratricopeptide repeat domain 28 [Bos taurus]
gi|296478445|gb|DAA20560.1| tetratricopeptide repeat domain 28 [Bos taurus]
Length = 2447
Score = 35.9 bits (80), Expect = 6.1, Method: Composition-based stats.
Identities = 25/203 (12%), Positives = 56/203 (27%), Gaps = 12/203 (5%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
S ++ RE+ +++ +F A + Q + + K A+ +
Sbjct: 316 SKDELSEARELGNMGAVYIAMGDFENAVQCHEQHLKIAK--DLGNKREEARAYSNLGSAY 373
Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
+ + Y + + + M + + + QY + +
Sbjct: 374 HYRRNFDKAMSYHNYVLELAQELMEKAIEMRAYAGLGHAARCMQDLERAKQYHEQQLGIA 433
Query: 170 TN-SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
+ R +G + + K +A SD
Sbjct: 434 EDLKDRAAEGRASSNLGIIHQMKGDYDTALKLHKTHLCIAQEL---------SDYAAQGR 484
Query: 229 AMARLVEAYVALALMDEAREVVS 251
A + AY AL + D+A +
Sbjct: 485 AYGNMGNAYNALGMYDQAVKYHR 507
>gi|237750111|ref|ZP_04580591.1| conserved hypothetical protein [Helicobacter bilis ATCC 43879]
gi|229374298|gb|EEO24689.1| conserved hypothetical protein [Helicobacter bilis ATCC 43879]
Length = 802
Score = 35.9 bits (80), Expect = 6.1, Method: Composition-based stats.
Identities = 28/209 (13%), Positives = 65/209 (31%), Gaps = 5/209 (2%)
Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
D RE Y++A + ++ F+ + L+
Sbjct: 316 KSPSDIKRAPLIYREAYQEAQDLEAAGEIAVSWAKFS-----LRDEDTEYANELLHKVYS 370
Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
+ E + + E + + + + + ++ ++
Sbjct: 371 VFPAFFLIDKDATMELLDELEEVEQYTMAAPIAAYLSGNVPYNSELHAKLLNKSSEFYTK 430
Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
I + Y + KE + + G+Y + R+ VLANY + E
Sbjct: 431 IGDFDMAHKLHLDFLHYHPNDKLAQKVKERDDSLLFQVTGDYKTKLERYNYVLANYPNTE 490
Query: 225 HAEEAMARLVEAYVALALMDEAREVVSLI 253
A++A+ + Y+ +E ++ SL+
Sbjct: 491 SAKKALELKAKLYLENKKYEEILQMQSLL 519
>gi|221114901|ref|XP_002156148.1| PREDICTED: similar to nephrocystin 3 [Hydra magnipapillata]
Length = 1749
Score = 35.9 bits (80), Expect = 6.1, Method: Composition-based stats.
Identities = 17/214 (7%), Positives = 46/214 (21%), Gaps = 2/214 (0%)
Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM 99
R + + + + + +A + F++ + +
Sbjct: 1211 SLEMRKLIYKGEPHQDTADTLNNLGCAYAAKGQYDEANKKFHESLEMMKHIYKDKPHPAI 1270
Query: 100 SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLML 159
++ + Y + + +Y A K
Sbjct: 1271 ASSLNNLIYVYTVKGQYDQAIEKCEEIYQMRIAIYKNEPHPDIAASLSNLGCVYAYKRQY 1330
Query: 160 QYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLAN 219
+ ++ + L L Q+
Sbjct: 1331 DKAIELYKQSLQMRKFINKNKPHPDVASSLNKLGCAYAGKGLYNQAIKKFQKSLQMRKLI 1390
Query: 220 YSDAEHAEEA--MARLVEAYVALALMDEAREVVS 251
+++ H + A + +L AY D A +
Sbjct: 1391 FNNKPHPDIASSLDKLGSAYTDKGQYDLAIKYRQ 1424
>gi|317503869|ref|ZP_07961878.1| conserved hypothetical protein [Prevotella salivae DSM 15606]
gi|315665025|gb|EFV04683.1| conserved hypothetical protein [Prevotella salivae DSM 15606]
Length = 960
Score = 35.9 bits (80), Expect = 6.1, Method: Composition-based stats.
Identities = 10/71 (14%), Positives = 23/71 (32%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ + + ++ +Y + H +EA L Y A E ++
Sbjct: 531 FHSGIIFKDQLDNLDLSEKALLRLIQHYPNFAHIDEAFYHLYLLYARRNDFTHAEEYLTR 590
Query: 253 IQERYPQGYWA 263
++ P+ W
Sbjct: 591 LRRECPKSQWT 601
>gi|291458927|ref|ZP_06598317.1| conserved hypothetical protein [Oribacterium sp. oral taxon 078
str. F0262]
gi|291418181|gb|EFE91900.1| conserved hypothetical protein [Oribacterium sp. oral taxon 078
str. F0262]
Length = 920
Score = 35.9 bits (80), Expect = 6.1, Method: Composition-based stats.
Identities = 12/43 (27%), Positives = 20/43 (46%)
Query: 228 EAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
EA LV+AY +EA + +S E +P+ + L+
Sbjct: 563 EAYLLLVDAYEKAGKHEEAVKTLSAAVESFPEDSELKQQLELL 605
>gi|284051331|ref|ZP_06381541.1| TPR repeat-containing protein [Arthrospira platensis str. Paraca]
Length = 526
Score = 35.9 bits (80), Expect = 6.1, Method: Composition-based stats.
Identities = 22/204 (10%), Positives = 45/204 (22%), Gaps = 7/204 (3%)
Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
D ++ K +A + + S P + L + Y +
Sbjct: 303 VDPNSASFYHQLGQALAKCDRLLEALAAYKRASELHPTSTPVLFDLGQALTKLYHWSEAI 362
Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQM----IRDVPYDQRATKLMLQYMSRIVE 167
+ D + + ++ +
Sbjct: 363 ATYQKALYLNPPNQAEIQTHLQEVQDKQRHLDEEIAAYSDSHEFHPNSSESYEKFAQFLR 422
Query: 168 RYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE 227
+ Q A ++G + + AI +Q + H +
Sbjct: 423 SKGKIEDAIIGFHQACILNPQSAVAHHQLGYTLARGQRWDEAILAYQKAAELNPYSPHVQ 482
Query: 228 EAMARLVEAYVALALMDEAREVVS 251
L EA V +DEA
Sbjct: 483 ---YHLGEALVEEGRLDEAIAHFK 503
>gi|254445676|ref|ZP_05059152.1| tetratricopeptide repeat domain protein [Verrucomicrobiae bacterium
DG1235]
gi|198259984|gb|EDY84292.1| tetratricopeptide repeat domain protein [Verrucomicrobiae bacterium
DG1235]
Length = 890
Score = 35.9 bits (80), Expect = 6.1, Method: Composition-based stats.
Identities = 21/113 (18%), Positives = 40/113 (35%), Gaps = 1/113 (0%)
Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
L Y ++ ++ + + A ++ IG + AAI F +
Sbjct: 408 LGYCHFMLGQHQIAIASFQQATHSAPDLPIAAQAQLWIGICQFTTNQLEAAIETFAQIKN 467
Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+ + + EA R + A+ AL +DEA + YP L++
Sbjct: 468 SPAHSFLRPEAAYREIAAHYALGNLDEALPAIENWLSAYPAHPREAEA-RLLQ 519
>gi|154503155|ref|ZP_02040215.1| hypothetical protein RUMGNA_00979 [Ruminococcus gnavus ATCC 29149]
gi|153796149|gb|EDN78569.1| hypothetical protein RUMGNA_00979 [Ruminococcus gnavus ATCC 29149]
Length = 182
Score = 35.9 bits (80), Expect = 6.1, Method: Composition-based stats.
Identities = 14/169 (8%), Positives = 43/169 (25%), Gaps = 16/169 (9%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKA--------------- 64
K A + +++ C L G + + ++KA
Sbjct: 1 MKRATLLALTVSACLLTGCTNALKDGTGYLEDGNYKEAVTAFQKAVDEGKKTAEAYRGLG 60
Query: 65 VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS-LLMSAFVQYSAGKYQQAASLGEEYITQ 123
+ + ++++++ A + F + + L + + + G
Sbjct: 61 MAYYEQEDYASAKDAFEKALAAGGEKNQVIYNLLGICGMKLNDYNYALEQFNQGISLSQN 120
Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
S + V + ++ ++ Y +
Sbjct: 121 SGTSMENAESFSEVLQEMRFNQIVCYEKLGDWENAKTKIAEYIQVYPDD 169
>gi|18310039|ref|NP_561973.1| tetratricopeptide repeat protein [Clostridium perfringens str. 13]
gi|110800967|ref|YP_695759.1| TPR repeat-containing protein [Clostridium perfringens ATCC 13124]
gi|18144718|dbj|BAB80763.1| conserved hypothetical protein [Clostridium perfringens str. 13]
gi|110675614|gb|ABG84601.1| tetratricopeptide repeat protein [Clostridium perfringens ATCC
13124]
Length = 473
Score = 35.9 bits (80), Expect = 6.1, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 35/110 (31%), Gaps = 6/110 (5%)
Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS----- 221
++Y ++ + + +G Y + AI FQ L +Y
Sbjct: 360 KKYEDALKDFEKAYAFSSDSYLRPHLIYFMGTSYENLDKNTEAIKYFQEYLKDYKAKPDA 419
Query: 222 -DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
D + + + L Y E+++ I+ YP + V +
Sbjct: 420 EDFMYTPQCLYNLAILYNKEGNSAESKKYAQEIENDYPNTMFYNDVTKKI 469
>gi|321451357|gb|EFX63038.1| hypothetical protein DAPPUDRAFT_308631 [Daphnia pulex]
Length = 802
Score = 35.9 bits (80), Expect = 6.2, Method: Composition-based stats.
Identities = 18/202 (8%), Positives = 50/202 (24%), Gaps = 7/202 (3%)
Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
+Y + + K+ E F + + + + +
Sbjct: 504 VEALYNLGLTYRSTNQLEKSLEQFVKLQMVLRHQPEVLFQVASLNEELGNDEQAIEWYLQ 563
Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDV---PYDQRATKLMLQYMSRIVERYTNSP 173
+ + Q + + ++++++
Sbjct: 564 VHTVVPSDEGVHQKLGETFDRLGDRQQAFQYYSDSYRHYPSNLEVIRWLAAYFTEMHVPE 623
Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
R A + + + G Y A+ + + + + A+ RL
Sbjct: 624 KAIALYERAGQMRPNEAQWPLAVASCTQRVGNYHKALQILKSTRSKFPENIECLRALIRL 683
Query: 234 VEAYVALALMDEAREVVSLIQE 255
L L EA + S +++
Sbjct: 684 C---TDLGLK-EAGDYASDLRK 701
>gi|218676782|ref|YP_002395601.1| hypothetical protein VS_II1021 [Vibrio splendidus LGP32]
gi|218325050|emb|CAV26887.1| Conserved hypothetical protein [Vibrio splendidus LGP32]
Length = 417
Score = 35.9 bits (80), Expect = 6.2, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 26/86 (30%), Gaps = 4/86 (4%)
Query: 17 YQLYKFALTIFFSIAVCFLVGW---ERQSSRDVYLDSVTDVRYQREVYEKAV-LFLKEQN 72
Y++ + L+I L G Q+S SV Q+ Y + ++
Sbjct: 5 YKMKRTTLSIMLLSTAMLLTGCGEESNQTSNAATTQSVEKEPTQKACYNVGETTSFERRD 64
Query: 73 FSKAYEYFNQCSRDFPFAGVARKSLL 98
+ A + ++ K
Sbjct: 65 VTGARCQWQSEHNFIVYSEDLSKPEY 90
>gi|182626237|ref|ZP_02953995.1| tetratricopeptide repeat protein [Clostridium perfringens D str.
JGS1721]
gi|177908501|gb|EDT71034.1| tetratricopeptide repeat protein [Clostridium perfringens D str.
JGS1721]
Length = 475
Score = 35.9 bits (80), Expect = 6.2, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 35/110 (31%), Gaps = 6/110 (5%)
Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS----- 221
++Y ++ + + +G Y + AI FQ L +Y
Sbjct: 362 KKYEDALKDFEKAYAFSSDSYLRPHLIYFMGTSYENLDKNTEAIKYFQEYLKDYKAKPDA 421
Query: 222 -DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
D + + + L Y E+++ I+ YP + V +
Sbjct: 422 EDFMYTPQCLYNLAILYNKEGNSAESKKYAQEIENDYPNTMFYNDVTKKI 471
>gi|119628675|gb|EAX08270.1| intraflagellar transport 88 homolog (Chlamydomonas), isoform CRA_e
[Homo sapiens]
Length = 824
Score = 35.9 bits (80), Expect = 6.2, Method: Composition-based stats.
Identities = 21/193 (10%), Positives = 54/193 (27%), Gaps = 7/193 (3%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
KAV +L+++++++A E + A + L + + + +
Sbjct: 420 NKAVTYLRQKDYNQAVEILKVLEKKDNRVKSAAATNLSALYYMGKDFAQASSYADIAVNS 479
Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVP----YDQRATKLMLQYMSRIVERYTNSPYVKG 177
+Y + + + + + + + L + E+
Sbjct: 480 DRYNPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNRLDEALD 539
Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
+ A +I Y AI V++ +++L E Y
Sbjct: 540 CFLKLHAILRNSAEVLYQIANIYELMENPSQAIEWLMQVVSVIPTDPQV---LSKLGELY 596
Query: 238 VALALMDEAREVV 250
+A +
Sbjct: 597 DREGDKSQAFQYY 609
>gi|57237121|ref|YP_178133.1| hypothetical protein CJE0109 [Campylobacter jejuni RM1221]
gi|86149594|ref|ZP_01067824.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
CF93-6]
gi|88597393|ref|ZP_01100628.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
84-25]
gi|121613259|ref|YP_999838.1| hypothetical protein CJJ81176_0149 [Campylobacter jejuni subsp.
jejuni 81-176]
gi|148926912|ref|ZP_01810590.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni
CG8486]
gi|157414427|ref|YP_001481683.1| hypothetical protein C8J_0107 [Campylobacter jejuni subsp. jejuni
81116]
gi|167004809|ref|ZP_02270567.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni
81-176]
gi|205356489|ref|ZP_03223253.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni
CG8421]
gi|218561795|ref|YP_002343574.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni
NCTC 11168]
gi|57165925|gb|AAW34704.1| conserved hypothetical protein [Campylobacter jejuni RM1221]
gi|85839862|gb|EAQ57121.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
CF93-6]
gi|87250231|gb|EAQ73189.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
81-176]
gi|88190454|gb|EAQ94428.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
84-25]
gi|112359501|emb|CAL34285.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni
NCTC 11168]
gi|145844489|gb|EDK21597.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni
CG8486]
gi|157385391|gb|ABV51706.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni
81116]
gi|205345676|gb|EDZ32315.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni
CG8421]
gi|284925407|gb|ADC27759.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni
IA3902]
gi|307747071|gb|ADN90341.1| Putative uncharacterized protein [Campylobacter jejuni subsp.
jejuni M1]
gi|315057554|gb|ADT71883.1| TPR repeat containing exported protein [Campylobacter jejuni subsp.
jejuni S3]
gi|315926948|gb|EFV06310.1| tetratricopeptide repeat family protein [Campylobacter jejuni
subsp. jejuni DFVF1099]
gi|315929960|gb|EFV09114.1| tetratricopeptide repeat family protein [Campylobacter jejuni
subsp. jejuni 305]
gi|315931508|gb|EFV10475.1| tetratricopeptide repeat family protein [Campylobacter jejuni
subsp. jejuni 327]
Length = 315
Score = 35.9 bits (80), Expect = 6.2, Method: Composition-based stats.
Identities = 10/87 (11%), Positives = 28/87 (32%)
Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
++ + + A +G K+ Y AI ++ + + ++ + + +
Sbjct: 225 NFLITKQYKPARANFWLGEIEYKQKNYNNAIVYYKKSSSLSTKGDYFPKLLYHTAISLDK 284
Query: 240 LALMDEAREVVSLIQERYPQGYWARYV 266
A ++ YP A+
Sbjct: 285 TGDTKTANGFYKALKTNYPNSPEAKAS 311
>gi|319638046|ref|ZP_07992810.1| HemY protein [Neisseria mucosa C102]
gi|317400691|gb|EFV81348.1| HemY protein [Neisseria mucosa C102]
Length = 407
Score = 35.9 bits (80), Expect = 6.2, Method: Composition-based stats.
Identities = 40/279 (14%), Positives = 78/279 (27%), Gaps = 11/279 (3%)
Query: 1 MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV 60
+ V+ + + A+ L + F+ G +R R
Sbjct: 28 VYVVVEQTMLRINLHAFVLGLLLSVFVLYFLIKFVFGLLNLPARMQRFGIARKGRQASAS 87
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
A L E F KA + + ++ +L++ A ++ E
Sbjct: 88 LNSAGLAYFEGRFEKAEQEAAKVLQNKEAGDNRTLALMLGAHAADQMENFELRDRYLHEI 147
Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK---- 176
+ + ++ + + A + +SR+V +
Sbjct: 148 EHLPQKQQLSRHLLLAESALGRRDYPTAAQNLEAAAKINGNLSRLVRLQLRYAFDHGDAS 207
Query: 177 GARFYVTVGRNQLAAKEVEIGRY----YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232
A + E +Y Y + V R + L ++ + E
Sbjct: 208 DVLAKAEKLVKAGAINDYEAEQYQNWAYRRLLSEVTDAGRLKACLKQIPESVKSGELCVA 267
Query: 233 LVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+ E Y L L EA + V YPQ +E V+
Sbjct: 268 IAEKYERLGLYTEAVKWVKT---HYPQNRQPELLEAFVE 303
>gi|218768331|ref|YP_002342843.1| putative lipoprotein [Neisseria meningitidis Z2491]
gi|121052339|emb|CAM08670.1| putative lipoprotein [Neisseria meningitidis Z2491]
gi|308389429|gb|ADO31749.1| putative fimbrial biogenesis and twitching motility protein
[Neisseria meningitidis alpha710]
gi|319410576|emb|CBY90945.1| type IV pilus biogenesis lipoprotein PilW [Neisseria meningitidis
WUE 2594]
Length = 253
Score = 35.9 bits (80), Expect = 6.2, Method: Composition-based stats.
Identities = 27/245 (11%), Positives = 60/245 (24%), Gaps = 14/245 (5%)
Query: 28 FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87
S+ + +G S R + V + + A+ +++ Q++ +A +
Sbjct: 9 ISLLLVLALGACSTSYRPSRAEKANQVSNIKT--QLAMEYMRGQDYRQATASIEDALKSD 66
Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI------TQYPESKNVDYVYYLVGMSY 141
P +A K Q++ +
Sbjct: 67 PKNELAWLVRAEIYQYLKVNDKAQESFRQALSIKPDSAEINNNYGWFLCGRLNRPAESMA 126
Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
+ + + + Q E+ R +
Sbjct: 127 YFDKALADPTYPTPYIANLNKGICSAKQGQFGLAEAYLKRSLAAQPQFPPAFKELARTKM 186
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV--EAYVALALMDEAREVVSLIQERYPQ 259
G+ A F+ Y +A L+ + AL A E + +Q +P
Sbjct: 187 LAGQLGDADYYFK----KYQSRVEVLQADDLLLGWKIAKALGNAQAAYEYEAQLQANFPY 242
Query: 260 GYWAR 264
+
Sbjct: 243 SEELQ 247
>gi|326432946|gb|EGD78516.1| mbre TPR repeat protein [Salpingoeca sp. ATCC 50818]
Length = 870
Score = 35.9 bits (80), Expect = 6.3, Method: Composition-based stats.
Identities = 15/207 (7%), Positives = 46/207 (22%), Gaps = 14/207 (6%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
+ + A EYF + + + + +A
Sbjct: 403 NLGCSYDDRGQYDLAIEYFLKSLQIKVDTLGEMHPGTATTYDNLGLAYKNKAEYDRAIEC 462
Query: 122 TQYPESKNVDYVYYLVGMS--YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
+ +D + + + V + +++ + + + +
Sbjct: 463 YEKSLQIKLDTLGTKHLETAVTYHNLGQVYNKKGQFDDAIEFYQKSL-QIKMDALGEKHP 521
Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
T N + + R + + + D + Y
Sbjct: 522 RTATTCHNIGQVYAAKGEYDRAISFYKRSLQIRLDTLGSKHPDTATT---HHDMGHVYYR 578
Query: 240 LALMDEA--------REVVSLIQERYP 258
D A + + + ++P
Sbjct: 579 KGEHDRAIECYEKGLQSYLDTLGPQHP 605
>gi|218780060|ref|YP_002431378.1| hypothetical protein Dalk_2217 [Desulfatibacillum alkenivorans
AK-01]
gi|218761444|gb|ACL03910.1| TPR repeat-containing protein [Desulfatibacillum alkenivorans
AK-01]
Length = 702
Score = 35.9 bits (80), Expect = 6.3, Method: Composition-based stats.
Identities = 27/220 (12%), Positives = 56/220 (25%), Gaps = 6/220 (2%)
Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
++ + + Y + ++ KA YF + P + L ++
Sbjct: 458 KEFQKAVELKPDFAQANYNIGISLGHQEEHEKAIPYFEKAVEKEPENVLYLNDLALAYMG 517
Query: 104 QYSAGKYQQAASLGEEY---ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
+ V + + R +
Sbjct: 518 AGRLEDAITRLYQALRIEPEYAPTHNNLGVALGGQAMVTQALEHFRKAVEIYPDYADAHR 577
Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220
+ ++ N P V + +GR Y G+Y A+ F+ L
Sbjct: 578 NLGILLGNLDNHPKAIAEFEKVIKLLPRDPQANFLLGRSYAAVGKYEKAVLHFRETLQAV 637
Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
D A+ + Y+ EA + I + P+
Sbjct: 638 PDYI---PALYNIGLIYMGQEKYVEAAKFFEKILKIKPEN 674
>gi|109120148|ref|XP_001086373.1| PREDICTED: intraflagellar transport protein 88 homolog isoform 2
[Macaca mulatta]
gi|109120152|ref|XP_001086485.1| PREDICTED: intraflagellar transport protein 88 homolog isoform 3
[Macaca mulatta]
Length = 824
Score = 35.9 bits (80), Expect = 6.3, Method: Composition-based stats.
Identities = 21/193 (10%), Positives = 54/193 (27%), Gaps = 7/193 (3%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
KAV +L+++++++A E + A + L + + + +
Sbjct: 420 NKAVTYLRQKDYNQAVEILKMLEKKDSRVKSAAATNLSALYYMGKDFAQASSYADIAVNS 479
Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVP----YDQRATKLMLQYMSRIVERYTNSPYVKG 177
+Y + + + + + + + L + E+
Sbjct: 480 DRYNPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNRLDEALD 539
Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
+ A +I Y AI V++ +++L E Y
Sbjct: 540 CFLKLHAILRNSAEVLYQIANIYELMENPSQAIEWLMQVVSVVPTDPQV---LSKLGELY 596
Query: 238 VALALMDEAREVV 250
+A +
Sbjct: 597 DHEGDKSQAFQYY 609
>gi|78189309|ref|YP_379647.1| TPR repeat-containing protein [Chlorobium chlorochromatii CaD3]
gi|78171508|gb|ABB28604.1| TPR repeat [Chlorobium chlorochromatii CaD3]
Length = 471
Score = 35.9 bits (80), Expect = 6.3, Method: Composition-based stats.
Identities = 25/195 (12%), Positives = 53/195 (27%), Gaps = 10/195 (5%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
A+ + + +A E + DF F + + ++A + E
Sbjct: 108 NLALGYFNNSMYEEALEQIERVMVDFAFEKEYHYYRGIILQRLDRYDEAEKAFLMALELD 167
Query: 122 TQYPESKNV-DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
++ ++ Y + + G + + + + Y +
Sbjct: 168 NEFADAWYEIAYCHDVCGRLEESTTTYNTALDHDPYNINAWYNNGLVLSKMKHYDE---- 223
Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE----EAMARLVEA 236
+ A + + R +A R Q +Y E A+ L A
Sbjct: 224 -ALFCYDMALAIADDFSSAWYNRANVLAITGRIQEAAESYEQTLELEPEDINALYNLGIA 282
Query: 237 YVALALMDEAREVVS 251
Y L +A E
Sbjct: 283 YEELERYPDAMECYR 297
>gi|20090223|ref|NP_616298.1| O-linked GlcNAc transferase [Methanosarcina acetivorans C2A]
gi|19915215|gb|AAM04778.1| O-linked GlcNAc transferase [Methanosarcina acetivorans C2A]
Length = 400
Score = 35.9 bits (80), Expect = 6.3, Method: Composition-based stats.
Identities = 23/198 (11%), Positives = 46/198 (23%)
Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
Y Y KA+ + ++ +A E + + + P A ++ + A
Sbjct: 152 PDYPNAWYGKALNLSQAGSYEEAVEAYEKVLEESPDYKEAWAGKGIALGQMGRYDEAIIA 211
Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
E + E+ V S+ Q ++ + + N
Sbjct: 212 YDKAIEIDPGFLEAWYYKGVDLDSLGSHRQALKAYEKAVELDPENDDAWNNMGIDLENLE 271
Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
+ A + + + EA L
Sbjct: 272 KYEEAINAFDKAIAINSENSDVWYNKGFTLSQMHRFEEAVEAYRKATQLDPEYLEAYTSL 331
Query: 234 VEAYVALALMDEAREVVS 251
L +EA E
Sbjct: 332 GFVLAQLKNFEEALETYE 349
>gi|262371086|ref|ZP_06064408.1| type 4 fimbrial biogenesis protein [Acinetobacter johnsonii SH046]
gi|262313972|gb|EEY95017.1| type 4 fimbrial biogenesis protein [Acinetobacter johnsonii SH046]
Length = 266
Score = 35.9 bits (80), Expect = 6.3, Method: Composition-based stats.
Identities = 28/253 (11%), Positives = 74/253 (29%), Gaps = 14/253 (5%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
K L + ++V +LVG + +++ +V + A ++K ++ A
Sbjct: 7 KLCLALTLGVSVWYLVGCQTVNTKGDPSKAVQVRT------QLAAEYIKSNDYDAAKRTL 60
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
+Q A + + + S ++A + I P++ Y
Sbjct: 61 DQALDIDSRDASANMMMGVLLQREGSPQNVEKAERYFKHAIAAEPKNAQARNNYGTYLYQ 120
Query: 141 YAQMIRDVPY--------DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
+ + L+ + R + + A +
Sbjct: 121 IGRYNDAIDQLQVAGSTLGYDQRYRALENLGRAYLQVGRVAEAEAAFKQALQVNSGAYLA 180
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+E+ R + A ++ + + A+ + A ++ +V+
Sbjct: 181 MIEMAEISYLRQQNAEATQYYEQFVRAVGEKNLDARALWIGIRIARANHDTMGSQVLVNQ 240
Query: 253 IQERYPQGYWARY 265
++ YP +
Sbjct: 241 LRALYPDSQEYKR 253
>gi|203284130|ref|YP_002221870.1| surface-located membrane protein 1 [Borrelia duttonii Ly]
gi|201083573|gb|ACH93164.1| surface-located membrane protein 1 [Borrelia duttonii Ly]
Length = 781
Score = 35.9 bits (80), Expect = 6.3, Method: Composition-based stats.
Identities = 15/220 (6%), Positives = 55/220 (25%)
Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
+ + +Y + + + Y+ ++ K + + ++ + F++ P A + S
Sbjct: 421 KKAETIYEEIANTTNNEEDHYKLGIIKFKLKKYEESLQAFDKAISLNPQHKKAYTNKGTS 480
Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
+ + Y + + TK
Sbjct: 481 LIALNKPQQAIKEFEKAIAIDQNYDNAYYKKGIAEEQDNDKQNAFISFKKAYEITKNPHY 540
Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220
+ + + ++ + ++ + + +
Sbjct: 541 ALKAGIIANHLGDFKNSEKYLKQSNTSLNEKNDIMFYNLSMANFKNNHLNESLININKAL 600
Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
+ E + Y+ +EA + + + + P
Sbjct: 601 NINPTQTEYLYLKASIYLTKENYNEAVPLYNTVISKNPDN 640
>gi|149181815|ref|ZP_01860305.1| hypothetical protein BSG1_09111 [Bacillus sp. SG-1]
gi|148850454|gb|EDL64614.1| hypothetical protein BSG1_09111 [Bacillus sp. SG-1]
Length = 116
Score = 35.9 bits (80), Expect = 6.3, Method: Composition-based stats.
Identities = 7/53 (13%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQ 71
+ + ++ + +A+ LVG + ++ + ++ + +EK + E+
Sbjct: 1 MKRISVILVSLLAIFSLVGCGNNETEEITKEQAEEIAMEE--FEKDLAQFNEK 51
>gi|89057722|ref|YP_512176.1| tetratricopeptide TPR_2 [Jannaschia sp. CCS1]
gi|88866276|gb|ABD57152.1| Tetratricopeptide TPR_2 [Jannaschia sp. CCS1]
Length = 824
Score = 35.9 bits (80), Expect = 6.3, Method: Composition-based stats.
Identities = 9/69 (13%), Positives = 20/69 (28%), Gaps = 12/69 (17%)
Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQ 82
+ + L + R E Y+ A+ ++E +F +A F
Sbjct: 7 TRFCLVLVVILGLAACQSSEER------------AEEHYQNALNLIEEGDFERAGVEFRN 54
Query: 83 CSRDFPFAG 91
++
Sbjct: 55 VFQNNGQHR 63
>gi|13324592|gb|AAK18799.1|AF305607_1 LMP1 [Borrelia burgdorferi]
Length = 1065
Score = 35.9 bits (80), Expect = 6.3, Method: Composition-based stats.
Identities = 23/219 (10%), Positives = 59/219 (26%)
Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
+ + Y Q + Y+ ++ K + + + E F+Q + P A + ++
Sbjct: 706 KAENAYEKITKLTNTQEDHYKLGIIRFKLKKYEHSIESFDQTIKLDPKHKKALHNKGIAL 765
Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
+ K ++ + Y + + Q K
Sbjct: 766 MMLNKNKKAIESFEKAIQIDKNYGTAYYQKGIAEEKNGDMQQAFASFKNAYNLDKNPNYA 825
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
+ + + + + N E+ I + + E + +
Sbjct: 826 LKAGIVSNNLGNFKQSEEYLNFFNANAKKPNEIAIYNLSIAKFENNKLEESLETINKAID 885
Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
E + + A + SL+ E+ P+
Sbjct: 886 LNPEKSEYLYLKASINLKKENYQNAISLYSLVIEKNPEN 924
>gi|305665074|ref|YP_003861361.1| hypothetical protein FB2170_02205 [Maribacter sp. HTCC2170]
gi|88709826|gb|EAR02058.1| hypothetical protein FB2170_02205 [Maribacter sp. HTCC2170]
Length = 478
Score = 35.9 bits (80), Expect = 6.3, Method: Composition-based stats.
Identities = 5/53 (9%), Positives = 13/53 (24%)
Query: 5 LGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQ 57
+ C + +Q++K + + +VG
Sbjct: 7 IFGKNCFSMNYKFQMFKIQYRLLLVLFTTLIVGCSNDDGNISVDPDKETEIPD 59
>gi|312132187|ref|YP_003999527.1| tetratricopeptide tpr_1 repeat-containing protein [Leadbetterella
byssophila DSM 17132]
gi|311908733|gb|ADQ19174.1| Tetratricopeptide TPR_1 repeat-containing protein [Leadbetterella
byssophila DSM 17132]
Length = 380
Score = 35.9 bits (80), Expect = 6.4, Method: Composition-based stats.
Identities = 29/256 (11%), Positives = 62/256 (24%), Gaps = 22/256 (8%)
Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDV-----------------RYQREVYEKAV 65
I F + L S + V Y +A
Sbjct: 1 MRLILFFVFSFSLWSCSDSSRSAYNIPEVEKEGVDVILEQLSESIKSNPSNAAPYYRRAY 60
Query: 66 LFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP 125
K + +A ++ R P +G + + A ++
Sbjct: 61 WQYKLGKYDEALIDISRAERLNPNSGEILYLKSAILYKAGKPNALENALFAEDQDYETPE 120
Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYD--QRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
+ +Y + + + + + ++
Sbjct: 121 LFTLIGNLYLDQKNYQKAELYFKKAESIYPYYGEVFRARGKYSALMGDTVTAIRNYKKAL 180
Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243
R+ L E+ + YLK + +A+ +L +A + + E L+
Sbjct: 181 SFRSDLFEHYDELIKIYLKSRQVDSALYFNELAIARFPENSELE---FNKGLILENAGLL 237
Query: 244 DEAREVVSLIQERYPQ 259
D A V P+
Sbjct: 238 DSAAVVYRSFLRNQPE 253
>gi|298737038|ref|YP_003729568.1| hypothetical protein HPB8_1547 [Helicobacter pylori B8]
gi|298356232|emb|CBI67104.1| conserved hypothetical protein [Helicobacter pylori B8]
Length = 220
Score = 35.9 bits (80), Expect = 6.4, Method: Composition-based stats.
Identities = 32/204 (15%), Positives = 68/204 (33%), Gaps = 6/204 (2%)
Query: 15 WAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFS 74
+ +K L I ++ V G + + + Y+ + + N
Sbjct: 1 MRLKYFKTFLFIAMAMIVIG-TGCANKKKKKDEYNKPAIFW-----YQGILREILFANLE 54
Query: 75 KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
A Y++ + + + +++L +Y A+ +EYI ++ NVDY+
Sbjct: 55 TADNYYSSLQSEHINSPLVPEAMLALGQAHMKKKEYVLASFYFDEYIKRFGTKDNVDYLT 114
Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
+L S+ ++ DQ + + +E+Y NS Y +
Sbjct: 115 FLKLQSHYYAFKNHSKDQEFISNSIVSLGEFIEKYPNSRYRPYVEYMQIKFILGQNELNR 174
Query: 195 EIGRYYLKRGEYVAAIPRFQLVLA 218
I Y KR + + +
Sbjct: 175 AIANVYKKRHKPEGVKRYLERIDE 198
>gi|254293579|ref|YP_003059602.1| hypothetical protein Hbal_1213 [Hirschia baltica ATCC 49814]
gi|254042110|gb|ACT58905.1| Tetratricopeptide domain protein [Hirschia baltica ATCC 49814]
Length = 481
Score = 35.9 bits (80), Expect = 6.4, Method: Composition-based stats.
Identities = 28/247 (11%), Positives = 60/247 (24%), Gaps = 39/247 (15%)
Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
+ L + T +Y A L+L+ + A + + + + + Q
Sbjct: 101 EEALPTFTGENRTETLYNIAQLYLQTDDNKNAAAKLEEWIASGAKPTGQQFMQMATLYQQ 160
Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA------QMIRDVPYDQRATKLM 158
P + +D+ YL + ++ V A K
Sbjct: 161 LGDNNKAIKYLEAMLNKDANPSKQAIDFAVYLYNETGQKTKLASFLMNKVIPSFPAEKKY 220
Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGE------------- 205
+ MS + N + + EV +
Sbjct: 221 YEVMSSLYYEDENDHKAFEVVKAMYLAGFLKTESEVMRVVNFYNAFNSPFEAAKVMEKEM 280
Query: 206 ----YVAAIPRFQLVLANYSDAEHAEEAM----------------ARLVEAYVALALMDE 245
+ + Y + + A+ RL +Y + +E
Sbjct: 281 NAGRIEVTAEKLDTLANLYQVSREYDRAIPVIQKLAKLTNSGKSYERLGRSYFEMGKNEE 340
Query: 246 AREVVSL 252
A + + L
Sbjct: 341 AEKNLRL 347
>gi|68304984|gb|AAY89995.1| hypothetical protein tlr1271 [uncultured bacterium BAC13K9BAC]
Length = 473
Score = 35.9 bits (80), Expect = 6.4, Method: Composition-based stats.
Identities = 18/185 (9%), Positives = 50/185 (27%), Gaps = 5/185 (2%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
KA+ FL + F +A + ++ + + + Q + E
Sbjct: 14 NKAINFLGQNKFLEAESICKEIIKEKDNSDAYHILSSIKLYKQEFNQSIELVNKSIEING 73
Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS--RIVERYTNSPYVKGAR 179
+ + + ++ + + +
Sbjct: 74 DNPGYYVTLGCAFSASKDYKNSIKAFKTAISLNDRVAQVHFYLGESYRKLKKYNDAIASF 133
Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
+ + A + +G Y ++ ++ +I F+ + D EA L Y+
Sbjct: 134 YRTIELSSDHVAAHMLLGLVYQEKKQFDLSIQSFKKCIEIMPDYP---EAHLNLGLCYLL 190
Query: 240 LALMD 244
+ +
Sbjct: 191 VGDYE 195
>gi|86133123|ref|ZP_01051705.1| outer membrane protein [Polaribacter sp. MED152]
gi|85819986|gb|EAQ41133.1| outer membrane protein [Polaribacter sp. MED152]
Length = 492
Score = 35.9 bits (80), Expect = 6.4, Method: Composition-based stats.
Identities = 27/254 (10%), Positives = 55/254 (21%), Gaps = 24/254 (9%)
Query: 14 AWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYL-DSVTDVRYQREVYEKAVLFLKEQN 72
+ K+ + I F D+ D E Y+ A++
Sbjct: 1 MKTINIKKYLVAILFLAVTI---SCSDDFVDVQPTGDNSEDFFNSEEDYQNALI----GA 53
Query: 73 FSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDY 132
+ + + + V Q + + Y
Sbjct: 54 YDMLQSSYLNVMLGEIASDNTLAGGESATDVLGIQEVDDMV---HTPQNVQLRDIWSWMY 110
Query: 133 VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK 192
+ + + + R + + V ++
Sbjct: 111 AGVNRANYILEFKDKTDFVGKEQVIAEATFLRAYYYFELVKWFGDVPLSVD---KRIEFG 167
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSD--------AEHAEEAMARLVEAYVALALMD 244
E K Y AN + A +A+ L + Y+ D
Sbjct: 168 EQFTIDRTPKAEIYTQLEADLTFAAANLPYVQTQAGRVTKGAAQAL--LGKIYLFQQKYD 225
Query: 245 EAREVVSLIQERYP 258
EA V+ + P
Sbjct: 226 EAATVLDDLILNGP 239
>gi|329736778|gb|EGG73043.1| NLPA lipoprotein [Staphylococcus epidermidis VCU028]
Length = 270
Score = 35.9 bits (80), Expect = 6.4, Method: Composition-based stats.
Identities = 10/70 (14%), Positives = 20/70 (28%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K I L ++ + E+ EKA LK++ + +
Sbjct: 1 MKKLFGIILVLALTIALAACGGGKDKEKTITVGASPAPHAEILEKAKPLLKKKGYDLKIK 60
Query: 79 YFNQCSRDFP 88
N +
Sbjct: 61 PINDYTTPNK 70
>gi|310823143|ref|YP_003955501.1| tol-pal system protein ybgf [Stigmatella aurantiaca DW4/3-1]
gi|309396215|gb|ADO73674.1| Tol-pal system protein YbgF [Stigmatella aurantiaca DW4/3-1]
Length = 293
Score = 35.9 bits (80), Expect = 6.4, Method: Composition-based stats.
Identities = 34/261 (13%), Positives = 72/261 (27%), Gaps = 17/261 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKE---QNFSK 75
+ + AL F+++ CF ++ D E ++A L + K
Sbjct: 5 MRRLALLALFTLSGCFYPANRGRALEAKVDRLTADNTRMTEELKQAREQLSATLPRIDEK 64
Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
E + + + + Y E+
Sbjct: 65 VAEVTRALEGLDKASRRNDADIGIQLQKTVEDMAQLRGQVETYIYKISELETALARTSEE 124
Query: 136 LVGMSYAQMIRDVPYDQRATKLM--------LQYMSRIVERYTNSPYVKGARFYVTVGRN 187
A + A K + + + + V AR T
Sbjct: 125 SEKKLLALQGSAAVKEAEAKKQAEALQRPTDKKEFLALAQEKAKAGEVLVARQLYTEFLK 184
Query: 188 QLAA------KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
+ A +G Y + A+ + V+ +++ A +A R + + L
Sbjct: 185 KWAKDALAGEAHFGLGETYFGEDKCREALFEYGKVIQDHTKTPSAPDAYLRSSDCFAKLK 244
Query: 242 LMDEAREVVSLIQERYPQGYW 262
+ DE+R + + + YP+
Sbjct: 245 MKDESRLALEELVKSYPKTEA 265
>gi|304413885|ref|ZP_07395302.1| hypothetical protein REG_0965 [Candidatus Regiella insecticola
LSR1]
gi|304283605|gb|EFL92000.1| hypothetical protein REG_0965 [Candidatus Regiella insecticola
LSR1]
Length = 214
Score = 35.9 bits (80), Expect = 6.4, Method: Composition-based stats.
Identities = 15/92 (16%), Positives = 27/92 (29%), Gaps = 1/92 (1%)
Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
I+ S A N + + + + + AI F L Y +
Sbjct: 115 EIINTPDASVIEPMANTADDTIGNNSEKGDYDAAFALVLKKQDDQAIIAFNTFLTAYPKS 174
Query: 224 EHAEEAMARLVEAYVALALMDEAR-EVVSLIQ 254
+ A L + Y DEA +++
Sbjct: 175 RYQANANYWLGQLYYNKGQKDEAMHHYARVVK 206
>gi|254488580|ref|ZP_05101785.1| tetratricopeptide TPR_2 [Roseobacter sp. GAI101]
gi|214045449|gb|EEB86087.1| tetratricopeptide TPR_2 [Roseobacter sp. GAI101]
Length = 277
Score = 35.9 bits (80), Expect = 6.4, Method: Composition-based stats.
Identities = 9/48 (18%), Positives = 19/48 (39%)
Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
A EA+ +L ++ AL + E + + R+P + +
Sbjct: 222 PVGPVAPEALYQLGQSLGALGQVQEGCVTLDEVATRFPASPFVPQAQA 269
>gi|156063570|ref|XP_001597707.1| hypothetical protein SS1G_01903 [Sclerotinia sclerotiorum 1980]
gi|154697237|gb|EDN96975.1| hypothetical protein SS1G_01903 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 155
Score = 35.9 bits (80), Expect = 6.4, Method: Composition-based stats.
Identities = 13/104 (12%), Positives = 28/104 (26%), Gaps = 6/104 (5%)
Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
+ + + Y K + A ++ + ++ F++
Sbjct: 10 DAESPLKAAELQVLRAQYEKEGEHVGVQTQFNYAWGLIKSNSRHEQQEGVRLLSDIFRIS 69
Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
E + L L EAR L+ E+ P+
Sbjct: 70 PER------RRECLYYLALGNYKLGNYSEARRYNDLLIEKEPEN 107
>gi|119628674|gb|EAX08269.1| intraflagellar transport 88 homolog (Chlamydomonas), isoform CRA_d
[Homo sapiens]
gi|119628678|gb|EAX08273.1| intraflagellar transport 88 homolog (Chlamydomonas), isoform CRA_d
[Homo sapiens]
Length = 833
Score = 35.9 bits (80), Expect = 6.4, Method: Composition-based stats.
Identities = 21/193 (10%), Positives = 54/193 (27%), Gaps = 7/193 (3%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
KAV +L+++++++A E + A + L + + + +
Sbjct: 429 NKAVTYLRQKDYNQAVEILKVLEKKDNRVKSAAATNLSALYYMGKDFAQASSYADIAVNS 488
Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVP----YDQRATKLMLQYMSRIVERYTNSPYVKG 177
+Y + + + + + + + L + E+
Sbjct: 489 DRYNPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNRLDEALD 548
Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
+ A +I Y AI V++ +++L E Y
Sbjct: 549 CFLKLHAILRNSAEVLYQIANIYELMENPSQAIEWLMQVVSVIPTDPQV---LSKLGELY 605
Query: 238 VALALMDEAREVV 250
+A +
Sbjct: 606 DREGDKSQAFQYY 618
>gi|113475906|ref|YP_721967.1| hypothetical protein Tery_2266 [Trichodesmium erythraeum IMS101]
gi|110166954|gb|ABG51494.1| Tetratricopeptide TPR_2 [Trichodesmium erythraeum IMS101]
Length = 1213
Score = 35.9 bits (80), Expect = 6.4, Method: Composition-based stats.
Identities = 23/212 (10%), Positives = 56/212 (26%), Gaps = 7/212 (3%)
Query: 53 DVRYQREVYEK-AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
+ + +Y + F A F Q + +P
Sbjct: 183 NPQQPMSIYRSCGNNLMTLGKFESAERVFQQLIKFYPELPDGYDGYARVTQSLGDWELAL 242
Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY---DQRATKLMLQYMSRIVER 168
+ S + + + + + + + +R++ R
Sbjct: 243 KRWSEAIFKFPENIGFQVQKGNTLINLARFDEAKAVFQHLKEKYPNQPQGYENYARLIHR 302
Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
+ + + +V+ G + + A FQ + Y + H E
Sbjct: 303 LGDGELALKLWSEAIIKFPKPIVFQVQKGNALINLSRFDEAEAVFQQLKEKYPNRPHGYE 362
Query: 229 AMARLVEAYVALALMDEAREVVSLIQERYPQG 260
A L ++ L + A + S ++P+
Sbjct: 363 RYAALTQS---LGDWELALKRWSEAVFKFPEN 391
>gi|313157652|gb|EFR57065.1| clan AA aspartic protease, TIGR02281 family [Alistipes sp. HGB5]
Length = 686
Score = 35.9 bits (80), Expect = 6.5, Method: Composition-based stats.
Identities = 27/203 (13%), Positives = 65/203 (32%), Gaps = 4/203 (1%)
Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
+ V D +YE+A ++ ++++ A + Q + VA L+ +
Sbjct: 128 KLVLKDKKGTTDIHDILYERAQIYYDLKDYANADADYRQMLKHDEADQVAMIGLIRNMIA 187
Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
+ + + E+Y T Y E+ Y + I D ++ ++
Sbjct: 188 RKEYDAALELVNKCEKYDTDYDETYRFRMQIYDKTGEVDKAIDDAIAYHEKSENPSSELT 247
Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
+ + S + + + + K + Y +Y AI + + Y +
Sbjct: 248 NPIFKKHLSYALAKVTSKINSVSDNGSWKML-RVTIYELGHDYANAIKAYDDLEKEYGTS 306
Query: 224 EHAEEAMARLVEAYVALALMDEA 246
+ + Y + + A
Sbjct: 307 RNI---YYYRADCYNEIGDTERA 326
>gi|325111315|ref|YP_004272383.1| Tetratricopeptide TPR_1 repeat-containing protein [Planctomyces
brasiliensis DSM 5305]
gi|324971583|gb|ADY62361.1| Tetratricopeptide TPR_1 repeat-containing protein [Planctomyces
brasiliensis DSM 5305]
Length = 448
Score = 35.9 bits (80), Expect = 6.5, Method: Composition-based stats.
Identities = 26/210 (12%), Positives = 58/210 (27%), Gaps = 21/210 (10%)
Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG---- 108
D Y + + +L++ N+SKA E F + + +
Sbjct: 190 DKEYIDAMNNRGYAYLEQGNYSKAIENFTDAIALDETYVKSYNNRGFTHMKVGDNEAAVK 249
Query: 109 ------------KYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
E D + R + + + +
Sbjct: 250 DFSKAIELSPNVVKHYLHRRDAWLAMGNQEKAVADQKQAQWTQQLLLISRRMQREPKNAE 309
Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
L+++ V + + ++ A YY + A + +
Sbjct: 310 LLVERAKHFVAAERFEEAFEDLSQAEKMDQDLAAVHTCRAEIYYGREEYKAAIESCTKAL 369
Query: 217 LANYSDAEHAEEAMARLVEAYVALALMDEA 246
A++ + A++ +AY+A +DEA
Sbjct: 370 DADHDFS-----ALSLRGDAYMATGKLDEA 394
>gi|291569640|dbj|BAI91912.1| serine/threonine protein kinase containing TPR domain [Arthrospira
platensis NIES-39]
Length = 732
Score = 35.9 bits (80), Expect = 6.5, Method: Composition-based stats.
Identities = 28/213 (13%), Positives = 65/213 (30%), Gaps = 10/213 (4%)
Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
L+ V+ + + ++ V L+ + A + FN+ + FP A + + +
Sbjct: 333 QVLNRPDPVKSEAAL-KRGVERLEAGDPEAAIKAFNRSIQLFPDNSEAFRKRANAYYDLQ 391
Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
+ + + P+ + Y + I D+ R +
Sbjct: 392 KYEQAIADYTQAIKLDPTNPDIYFNRSLAYHQMGDFGNAINDLNQVIRLNPEDTDAFYQ- 450
Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA-- 223
+ Y + + ++ ++ + Y RG Q +A+Y++A
Sbjct: 451 ---RGLAHYTQENYEAAILDYTEVIRRQPDHSEAYRARGSAHVKAGNLQAGMADYTEAIR 507
Query: 224 --EHAEEAMARLVEAYVALALMDEA-REVVSLI 253
+ A A L A + +I
Sbjct: 508 LNPQSAAAYYNRGRARFHLGDYQGALADYNQVI 540
>gi|283955558|ref|ZP_06373053.1| hypothetical protein C1336_000020087 [Campylobacter jejuni subsp.
jejuni 1336]
gi|283793019|gb|EFC31793.1| hypothetical protein C1336_000020087 [Campylobacter jejuni subsp.
jejuni 1336]
Length = 315
Score = 35.9 bits (80), Expect = 6.5, Method: Composition-based stats.
Identities = 10/87 (11%), Positives = 28/87 (32%)
Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
++ + + A +G K+ Y AI ++ + + ++ + + +
Sbjct: 225 NFLITKQYKPARANFWLGEIEYKQKNYNNAIVYYKKSSSLSTKGDYFPKLLYHTAISLDK 284
Query: 240 LALMDEAREVVSLIQERYPQGYWARYV 266
A ++ YP A+
Sbjct: 285 TGDTKTANGFYKALKTNYPNSPEAKAS 311
>gi|226947940|ref|YP_002803031.1| beta-lactamase [Clostridium botulinum A2 str. Kyoto]
gi|226841614|gb|ACO84280.1| beta-lactamase [Clostridium botulinum A2 str. Kyoto]
Length = 308
Score = 35.9 bits (80), Expect = 6.5, Method: Composition-based stats.
Identities = 10/54 (18%), Positives = 20/54 (37%), Gaps = 6/54 (11%)
Query: 17 YQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKE 70
++ KF + IF SI + L G ++ ++ Y A ++
Sbjct: 9 LKVNKFKMCIFISILIFSLTGCGNVENK------TSENTKPEIQYNSAFSKIES 56
>gi|254417224|ref|ZP_05030969.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
PCC 7420]
gi|196176030|gb|EDX71049.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
PCC 7420]
Length = 600
Score = 35.9 bits (80), Expect = 6.5, Method: Composition-based stats.
Identities = 27/208 (12%), Positives = 47/208 (22%), Gaps = 7/208 (3%)
Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL-LMSAFVQYSAGKYQ 111
+ Y + + ++ A + Q + P A + + ++ G
Sbjct: 171 NPDDATAYYNRGLARSDLGDYQGAIADYTQAIKINPDYADAYNNRGNARSNLEDYQGAIA 230
Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
+ N + + Q Y +R V R
Sbjct: 231 DYTQAIQLNPDDAKAYSNRGAARSDLEDYQGAIADFNQAIQINPDFAYAYNNRGVARSDL 290
Query: 172 SPYV--KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
Y A G G+ AI F + D + A
Sbjct: 291 EDYQGAIADFNQAIQINPDYANAYYNRGNARSDLGDDQGAIADFNQAIQLNPDFAY---A 347
Query: 230 MARLVEAYVALALMDEA-REVVSLIQER 256
A L +EA + IQ
Sbjct: 348 YYNRGNARSNLGDYEEAIADFAQAIQLN 375
>gi|224532142|ref|ZP_03672774.1| tetratricopeptide repeat domain protein [Borrelia valaisiana VS116]
gi|224511607|gb|EEF82013.1| tetratricopeptide repeat domain protein [Borrelia valaisiana VS116]
Length = 1011
Score = 35.9 bits (80), Expect = 6.5, Method: Composition-based stats.
Identities = 23/219 (10%), Positives = 60/219 (27%)
Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
+ +VY + + Y+ ++ K + F + E F+Q R P A + ++
Sbjct: 652 KAENVYEKITKLANTKEDYYKLGIIRFKLKKFEHSIESFDQTIRLDPKHKKAHNNKGIAL 711
Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
+ K ++ + Y + + Q K +
Sbjct: 712 MMLNQNKKAIESFEKAIQIDKNYDTAYYQKGIAEEKNGDMQQAFESFKNAYNLNKKLNYA 771
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
+ + + + N E+ I + + E + + +
Sbjct: 772 LKAGIVSNNLGNFKNSEEYLGFFNDNTKNPNEIAIYNLSIAKFENNKFEESLETINKAIN 831
Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
E + + A + +L+ + P+
Sbjct: 832 LNPEKIEYLYLKASINLKNKNYQNAISLYNLVIAKNPEN 870
Score = 35.9 bits (80), Expect = 6.5, Method: Composition-based stats.
Identities = 26/259 (10%), Positives = 69/259 (26%), Gaps = 8/259 (3%)
Query: 13 EAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDV-YLDSVTDVRYQREVYEKAVLFLKEQ 71
AY L K + V +G + S + + + T + +Y ++ +
Sbjct: 758 FKNAYNLNKKLNYALKAGIVSNNLGNFKNSEEYLGFFNDNTKNPNEIAIYNLSIAKFENN 817
Query: 72 NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
F ++ E N+ P + L S ++ + + S ++
Sbjct: 818 KFEESLETINKAINLNPE-KIEYLYLKASINLKNKNYQNAISLYNLVIAKNPENTSAYIN 876
Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
+ L + + Y K + N
Sbjct: 877 LAKAYEKLGNKTQAISTLEKIINKNNKLALNNLGILYKKEKKYQKAIEIFEKAIINSDIE 936
Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
+ + ++ + A + + EA+ L D+ +
Sbjct: 937 AKYNLATTLIEINDNARAKDLLKEYTKLKPN---NPEALHALGIIEYNENNNDQ---TLR 990
Query: 252 LIQERYPQGYWARYVETLV 270
+ +++P ++ ++
Sbjct: 991 ELVKKFPNYKKNENIKKII 1009
>gi|94967944|ref|YP_589992.1| TPR repeat-containing protein [Candidatus Koribacter versatilis
Ellin345]
gi|94549994|gb|ABF39918.1| Tetratricopeptide repeat protein [Candidatus Koribacter versatilis
Ellin345]
Length = 324
Score = 35.9 bits (80), Expect = 6.5, Method: Composition-based stats.
Identities = 22/218 (10%), Positives = 53/218 (24%), Gaps = 4/218 (1%)
Query: 39 ERQSSRDVYLDSVTDVRYQ----REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR 94
+ + L + Y + ++ +N+ +A F Q + +
Sbjct: 95 SGKPQDAIPLLEKVQTWFPSANVDASYILGICYIHLKNYDQARGAFAQMFDVKRDSAASY 154
Query: 95 KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
Q ++ A P + + +L + I D +
Sbjct: 155 LFTARMLLRQEYDPVAEEYAQKAIALEPTLPLAHYLLGELHLYKSRVPEAIEDFRKELNL 214
Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
++ + Y+ A + A + + +
Sbjct: 215 NPSYAPAYYKLADAYSRVQKYDDAERLLQRSIWLDATTTGPYILLGKVLEKKGEPLLALR 274
Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
+ S L ++Y L D+A + L
Sbjct: 275 ALQHAASMDPKNPITHHLLGQSYRDLGKSDDAERELKL 312
>gi|319404559|emb|CBI78165.1| Tetratricopeptide repeat protein [Bartonella rochalimae ATCC
BAA-1498]
Length = 558
Score = 35.9 bits (80), Expect = 6.5, Method: Composition-based stats.
Identities = 25/224 (11%), Positives = 70/224 (31%), Gaps = 6/224 (2%)
Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
+ + +Y A++ +N A +YF Q + A A +
Sbjct: 150 SGNHIKAIAKLEKHSKPSWYTLYHLALMNDLAKNPKDAKKYFIQAFNNQQGAITAPYTYE 209
Query: 99 MSAFVQYSAGKYQQAASLGEE---YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
S Q S + + + A + + Q+
Sbjct: 210 RIIIAYASFQLRQNMRSDAIKTLLHGEKILSGHKTLENIRKKVEKGANIENPIITPQQGI 269
Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
+L + + + + + + + A ++ + K ++ AI ++
Sbjct: 270 GEVLYNFGTTLNKKGSERIARIFQQFSLALYPKNEAALFQLAKISTKLDDFNQAIKIYRS 329
Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
+ + + + + +L DEA ++++L+++++P
Sbjct: 330 LPLS---SPYYRDGQFQLALTLAENGAYDEAIKLLTLLEKKFPN 370
>gi|291087357|ref|ZP_06571910.1| hypothetical protein CLOM621_07033 [Clostridium sp. M62/1]
gi|291075483|gb|EFE12847.1| hypothetical protein CLOM621_07033 [Clostridium sp. M62/1]
Length = 290
Score = 35.9 bits (80), Expect = 6.5, Method: Composition-based stats.
Identities = 22/193 (11%), Positives = 44/193 (22%), Gaps = 12/193 (6%)
Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
+ +S + + + + + A
Sbjct: 63 IHYSYYLPEDYDESRKYPLMMTMPGYDMMWFGEDSSGNNLNWRGFLCWTELPEDMIVVSA 122
Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
Q+ R + +Y T+ Y G ++ + Y
Sbjct: 123 QLEDWGETSARQAIELTEYFINHYSVDTDRVYASGYSAGGETMSQAVSMRPDIYAAYLHG 182
Query: 203 RGEYVAAI----------PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
++ F Y + A EA L +AY D ++ +
Sbjct: 183 ASQWDGEYAPIAENTVSVYIFMAENDEYYGSRRAREAYEHLYDAYRKAGWSD--DDISQM 240
Query: 253 IQERYPQGYWARY 265
+Q R P W
Sbjct: 241 LQIRTPDDEWFAE 253
>gi|212703178|ref|ZP_03311306.1| hypothetical protein DESPIG_01220 [Desulfovibrio piger ATCC 29098]
gi|212673444|gb|EEB33927.1| hypothetical protein DESPIG_01220 [Desulfovibrio piger ATCC 29098]
Length = 576
Score = 35.9 bits (80), Expect = 6.5, Method: Composition-based stats.
Identities = 27/214 (12%), Positives = 56/214 (26%), Gaps = 8/214 (3%)
Query: 43 SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF 102
+ L Y +Y +A+ E+ +A + A +
Sbjct: 49 PEEKELSPAAKDTYAYLLYMQALADEDEELLLQAAQQMT----GGTLPAKAWLEGALWLD 104
Query: 103 VQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYM 162
+ S + + P + G + + + + R + M
Sbjct: 105 SRRSEKVLPLLELGLQVWPDDLPLNLFSAEALAAHGKTEQGLEQIQAFVARHPDSLDARM 164
Query: 163 SRIVERYTNSPYVK-GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
I+ + + + + R + AIP Q +
Sbjct: 165 ELILLLVKAKRFDEAEKHIGNIAAGERTPMVDYYHARALIGMQRRAEAIPLLQKAIQAMP 224
Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
D EA+ L AY +EAR + + +
Sbjct: 225 DFV---EALVELAYAYEQQKQWNEARTIYEKLLK 255
>gi|57866404|ref|YP_188083.1| ABC transporter substrate-binding protein [Staphylococcus
epidermidis RP62A]
gi|251810279|ref|ZP_04824752.1| ABC superfamily ATP binding cassette transporter, binding protein
[Staphylococcus epidermidis BCM-HMP0060]
gi|282875598|ref|ZP_06284469.1| NLPA lipoprotein [Staphylococcus epidermidis SK135]
gi|57637062|gb|AAW53850.1| ABC transporter, substrate-binding protein [Staphylococcus
epidermidis RP62A]
gi|251806161|gb|EES58818.1| ABC superfamily ATP binding cassette transporter, binding protein
[Staphylococcus epidermidis BCM-HMP0060]
gi|281295625|gb|EFA88148.1| NLPA lipoprotein [Staphylococcus epidermidis SK135]
Length = 270
Score = 35.9 bits (80), Expect = 6.5, Method: Composition-based stats.
Identities = 10/70 (14%), Positives = 20/70 (28%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K I L ++ + E+ EKA LK++ + +
Sbjct: 1 MKKLFGIILVLALTIALAACGGGKDKEKTITVGASPAPHAEILEKAKPLLKKKGYDLKIK 60
Query: 79 YFNQCSRDFP 88
N +
Sbjct: 61 PINDYTTPNK 70
>gi|42784169|ref|NP_981416.1| ABC transporter, substrate-binding protein, putative [Bacillus
cereus ATCC 10987]
gi|42740100|gb|AAS44024.1| ABC transporter, substrate-binding protein, putative [Bacillus
cereus ATCC 10987]
Length = 270
Score = 35.9 bits (80), Expect = 6.5, Method: Composition-based stats.
Identities = 20/202 (9%), Positives = 45/202 (22%), Gaps = 3/202 (1%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K LT S ++ L + + L + EKA L+++ +
Sbjct: 1 MKKLLLTALISTSIFGLAACGGKDKDEKKLVVGASNVPHAVILEKAKPLLEKKGIELEVK 60
Query: 79 YFNQCSRDFP---FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
F + +++ + + + + + Y
Sbjct: 61 KFQDYVLPNKSLADKDLDANYFQHIPYLEKEMKDKKYDFEVAGKIHLEPIGVYSQKYKSL 120
Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
A +I L + I++ VK + L K
Sbjct: 121 KELPDGATIIMSNSVADHGRGLAILQKEGILKIKDGVDPVKATPKDIADNPKNLKFKTDI 180
Query: 196 IGRYYLKRGEYVAAIPRFQLVL 217
+
Sbjct: 181 EPGLLPQVYNNKEGDAVLINSN 202
>gi|216264231|ref|ZP_03436223.1| conserved hypothetical protein [Borrelia burgdorferi 156a]
gi|223888834|ref|ZP_03623425.1| conserved hypothetical protein [Borrelia burgdorferi 64b]
gi|225549074|ref|ZP_03770049.1| conserved hypothetical protein [Borrelia burgdorferi 94a]
gi|215980704|gb|EEC21511.1| conserved hypothetical protein [Borrelia burgdorferi 156a]
gi|223885650|gb|EEF56749.1| conserved hypothetical protein [Borrelia burgdorferi 64b]
gi|225370300|gb|EEG99738.1| conserved hypothetical protein [Borrelia burgdorferi 94a]
Length = 228
Score = 35.9 bits (80), Expect = 6.6, Method: Composition-based stats.
Identities = 16/168 (9%), Positives = 46/168 (27%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
+TI + ++ + L+ + ++Y+K++L + ++KA E
Sbjct: 1 MRKITIMILFYGLIINVCPTTTTSILKLNKKANKHTIEKLYQKSMLLKDSKKYNKAIESL 60
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
+ A L ++ + K + + I ++ +D + +
Sbjct: 61 TKIINMDQNQADAHLLLSELEYLNKNWKKAIIKSQDYLKIIDFKDKNNFLDISWAYFLIG 120
Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
+ D + L + +
Sbjct: 121 EVKNSMDYIIKFFQSGKELFRENIFIAIDALFKKSIYHFTNNENAAFN 168
>gi|157927998|gb|ABW03295.1| intraflagellar transport 88 homolog (Chlamydomonas) [synthetic
construct]
gi|157928711|gb|ABW03641.1| intraflagellar transport 88 homolog (Chlamydomonas) [synthetic
construct]
Length = 824
Score = 35.9 bits (80), Expect = 6.6, Method: Composition-based stats.
Identities = 21/193 (10%), Positives = 54/193 (27%), Gaps = 7/193 (3%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
KAV +L+++++++A E + A + L + + + +
Sbjct: 420 NKAVTYLRQKDYNQAVEILKVLEKKDSRVKSAAATNLSALYYMGKDFAQASSYADIAVNS 479
Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVP----YDQRATKLMLQYMSRIVERYTNSPYVKG 177
+Y + + + + + + + L + E+
Sbjct: 480 DRYNPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNRLDEALD 539
Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
+ A +I Y AI V++ +++L E Y
Sbjct: 540 CFLKLHAILRNSAEVLYQIANIYELMENPSQAIEWLMQVVSVIPTDPQV---LSKLGELY 596
Query: 238 VALALMDEAREVV 250
+A +
Sbjct: 597 DRGGDKSQAFQYY 609
>gi|146099591|ref|XP_001468684.1| hypothetical protein [Leishmania infantum]
gi|134073052|emb|CAM71772.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|322502721|emb|CBZ37804.1| unnamed protein product [Leishmania donovani BPK282A1]
Length = 425
Score = 35.9 bits (80), Expect = 6.6, Method: Composition-based stats.
Identities = 23/198 (11%), Positives = 58/198 (29%), Gaps = 8/198 (4%)
Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
E+ ++A ++ FS A E + + ++ + + + + G+ + +
Sbjct: 82 ELNKEAAEAFEKGEFSSAIEAWEKVAQSKQHTPNSPTLMSCLNNLACAYGEMGDSIRKLK 141
Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
+ V + + + M Q + + + + + A
Sbjct: 142 LLERSRDLVQAVYGTDHPQYGMVLYNMACAKEEMGLYADMKQLLEQSLALHEKRFNPRHA 201
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
+ + A + L+ E I + + AM L AY
Sbjct: 202 KVGRVLLLLAAAHGHLGEHEAQLRTAERAYEIVKRHCGPEHVQTTI----AMMTLGRAYG 257
Query: 239 ALALMD----EAREVVSL 252
A ++ A+ S+
Sbjct: 258 AAGQVERQLQLAQAAYSI 275
>gi|145550925|ref|XP_001461140.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124428973|emb|CAK93767.1| unnamed protein product [Paramecium tetraurelia]
Length = 556
Score = 35.9 bits (80), Expect = 6.6, Method: Composition-based stats.
Identities = 17/160 (10%), Positives = 37/160 (23%), Gaps = 5/160 (3%)
Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
A + ++ KA + ++Q + + ++ S G E
Sbjct: 63 AYAYFHNGDYKKAIQVYDQMMSKPDYNKEIHVYKACCYYALCQYEDSKRECSKGPETPLA 122
Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
++ + + L + R Y K
Sbjct: 123 VRLQFHIAHKKNDEKNLMTYHHKISENVHDQLCLAAIHYLRGHYEEATDAYKKLLLENRE 182
Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
+ + Y K + +I Q L Y +
Sbjct: 183 YTAINV-----YVALCYYKMEYFDVSIEILQSYLNQYPTS 217
>gi|319401811|gb|EFV90019.1| NLPA lipofamily protein [Staphylococcus epidermidis FRI909]
Length = 270
Score = 35.9 bits (80), Expect = 6.7, Method: Composition-based stats.
Identities = 10/70 (14%), Positives = 20/70 (28%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K I L ++ + E+ EKA LK++ + +
Sbjct: 1 MKKLFGIILVLALTIALAACGGGKDKEKTITVGASPAPHAEILEKAKPLLKKKGYDLKIK 60
Query: 79 YFNQCSRDFP 88
N +
Sbjct: 61 PINDYTTPNK 70
>gi|260683723|ref|YP_003215008.1| putative multiprotein-complex assembly protein [Clostridium
difficile CD196]
gi|260687383|ref|YP_003218517.1| putative multiprotein-complex assembly protein [Clostridium
difficile R20291]
gi|260209886|emb|CBA63813.1| putative multiprotein-complex assembly protein [Clostridium
difficile CD196]
gi|260213400|emb|CBE05035.1| putative multiprotein-complex assembly protein [Clostridium
difficile R20291]
Length = 593
Score = 35.9 bits (80), Expect = 6.7, Method: Composition-based stats.
Identities = 19/231 (8%), Positives = 58/231 (25%), Gaps = 21/231 (9%)
Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
Y + A ++ +E+++ A +Y+ + + L
Sbjct: 261 EKAKTYYKMAAEDDITEAKNNLAGIYFEEKDYENAIKYYEDAIAVGCKSSLENLGDLYYQ 320
Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK----- 156
+ + D +S+ + + + + +
Sbjct: 321 NQDIEKAISYYSRIPNNASCQIKLGNIYEDLNNIEEAISWYKKASENGDTRSSYRLGCIY 380
Query: 157 -------LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
+Y + + + R Y G+ + + +
Sbjct: 381 ESLGNTKNARKYFEMASSKNHMNARIHLGRIYFREGKLEESKMMFDTPANENNVYAQHMV 440
Query: 210 IPRFQLVLANYSDAEHAE---------EAMARLVEAYVALALMDEAREVVS 251
+ + +Y +++ E++ L + Y+ L EA +
Sbjct: 441 GLIYDMFYKDYVNSKFWYEKARAQGCVESIYNLGQIYLKLNDDAEAEKYYK 491
>gi|193659732|ref|XP_001943461.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog
[Acyrthosiphon pisum]
Length = 1185
Score = 35.9 bits (80), Expect = 6.7, Method: Composition-based stats.
Identities = 29/199 (14%), Positives = 69/199 (34%), Gaps = 18/199 (9%)
Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
+A ++F + R A L + G Q+ + + +S
Sbjct: 542 DRNQIYEASDWFKEALRIDNEHPDAWSLLGNLHLAKMEWGPGQKKFERVLKNPSTLNDSY 601
Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY-------------- 174
++ + + + Q R+ ++R L LQ+ +++++ + +
Sbjct: 602 SLIALGNVWLQTLHQPTRNKDQEKRHQDLALQFFTKVLKNDPRNIWAANGIGCVMAHKHC 661
Query: 175 VKGARFYVTVGRNQLAAKEVEI---GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231
+ AR R A Y+++ +Y++AI ++ + + + E +
Sbjct: 662 INEARDIFAQVREATADFCDVWLNIAHIYIEQKQYISAIQMYENCMKKFFKHDSV-EVLQ 720
Query: 232 RLVEAYVALALMDEAREVV 250
L AY + EA+ V
Sbjct: 721 YLGRAYFRAGKLKEAKTVF 739
>gi|163814118|ref|ZP_02205510.1| hypothetical protein COPEUT_00271 [Coprococcus eutactus ATCC 27759]
gi|158450567|gb|EDP27562.1| hypothetical protein COPEUT_00271 [Coprococcus eutactus ATCC 27759]
Length = 245
Score = 35.9 bits (80), Expect = 6.7, Method: Composition-based stats.
Identities = 33/212 (15%), Positives = 59/212 (27%), Gaps = 8/212 (3%)
Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQC--SRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
E Y+K V + + ++ +A F + L A + +Y +AA+
Sbjct: 18 DEYYDKGVTYYESGSYQEAITSFKDALNENQLFSEKKDQNIKLYMADAYLKSAQYAEAAA 77
Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
+E NV+ + L + + V
Sbjct: 78 TYKELTDSSFSGSNVNDLKDLASALDDFSNGNYGGALDVLLKEADTYPELYMYIGTCYAV 137
Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS------DAEHAEEA 229
+ + Y G Y + + LA D + +E
Sbjct: 138 TDDSENMFASYEKYVQTFGFNSYVYAMYGSYYLSNGDMESALAYIKNGLECDDTVYRKEL 197
Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGY 261
M V Y + D+A E+ S + E YP
Sbjct: 198 MLLQVAYYEKNSDFDQAYELASQLVETYPDYE 229
>gi|54297458|ref|YP_123827.1| hypothetical protein lpp1503 [Legionella pneumophila str. Paris]
gi|53751243|emb|CAH12654.1| hypothetical protein lpp1503 [Legionella pneumophila str. Paris]
Length = 260
Score = 35.9 bits (80), Expect = 6.7, Method: Composition-based stats.
Identities = 17/240 (7%), Positives = 48/240 (20%), Gaps = 10/240 (4%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYE--KAVLFLKEQNFSKA 76
+ K + I F+ + + + + + +LK+ + +A
Sbjct: 1 MLKSIRYLLIIIICLFVGACQHTQDNEEPNTIRKVNLSKAASFNVQLGLGYLKQGDRPRA 60
Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY-- 134
+ P + +L + ++ N +
Sbjct: 61 KKKLLTALEQQPDSADVNAALAYYFEQTKELEQAKKFYHKAITLSQNGGAQLNNYGAFLC 120
Query: 135 ---YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
+ + T + +
Sbjct: 121 RQGDYKNAETYFLKAVKDQNYVHTSGAYENAGLCAMAIPDHDKAILYFTKALNQDPSRKE 180
Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
E+ + K A+ Q + + +A + A E +
Sbjct: 181 SLYELVKLQSKIAHDKEALELLQKHADLVLNDKVM---LALAKDIANRTGQYTLAAEYEN 237
>gi|332290875|ref|YP_004429484.1| Tetratricopeptide TPR_1 repeat-containing protein [Krokinobacter
diaphorus 4H-3-7-5]
gi|332168961|gb|AEE18216.1| Tetratricopeptide TPR_1 repeat-containing protein [Krokinobacter
diaphorus 4H-3-7-5]
Length = 462
Score = 35.9 bits (80), Expect = 6.7, Method: Composition-based stats.
Identities = 23/203 (11%), Positives = 55/203 (27%), Gaps = 8/203 (3%)
Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
D + +KA ++ K+ + KA Q SL+ ++ + +
Sbjct: 93 DPHNEEVYIQKANIYSKQDDHEKAIHLLEQAIDL-TDDPADVYSLIGMEYLFLEDFQNAK 151
Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
+ + + + + + Y +
Sbjct: 152 LNFMK---CLEVDDQDYSALYNVIYCFDFLEEHEGAIDYLNMFLDNNPYCEVAWHQIGKQ 208
Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE---- 228
+ + YL++G+ + + R+ L NY E+
Sbjct: 209 YFGLKNYEKALSSYEFAIISDDRFVGAYLEKGKVLEKLGRYNEALENYQITLELEDPTSF 268
Query: 229 AMARLVEAYVALALMDEAREVVS 251
A+ R+ + Y L + A +
Sbjct: 269 ALLRMGKCYDKLGSDELAIKHFE 291
>gi|331082703|ref|ZP_08331826.1| hypothetical protein HMPREF0992_00750 [Lachnospiraceae bacterium
6_1_63FAA]
gi|330400322|gb|EGG79964.1| hypothetical protein HMPREF0992_00750 [Lachnospiraceae bacterium
6_1_63FAA]
Length = 497
Score = 35.9 bits (80), Expect = 6.7, Method: Composition-based stats.
Identities = 8/42 (19%), Positives = 17/42 (40%)
Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
M +L +AY + A + I + +P A + ++
Sbjct: 418 MFQLAQAYDKKGDKENANQWYQKIIDEFPGTKAASDAKDYLE 459
>gi|313677408|ref|YP_004055404.1| ompa/motb domain protein [Marivirga tractuosa DSM 4126]
gi|312944106|gb|ADR23296.1| OmpA/MotB domain protein [Marivirga tractuosa DSM 4126]
Length = 680
Score = 35.9 bits (80), Expect = 6.7, Method: Composition-based stats.
Identities = 10/107 (9%), Positives = 28/107 (26%), Gaps = 6/107 (5%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
I F+ A+ FLV + + + ++Y++A+ + A +
Sbjct: 1 MKIKYILFTSALLFLVSCSTFKRAEKKFEKG-EFDSAIDLYQQAL-----KKNDNAAQAL 54
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPES 127
+ + + + S + +
Sbjct: 55 FSIAESYRLSNRLEIAEPYYKASIDSGYTEDEVFYNYSLSLKANSNY 101
>gi|260792910|ref|XP_002591457.1| hypothetical protein BRAFLDRAFT_70033 [Branchiostoma floridae]
gi|229276662|gb|EEN47468.1| hypothetical protein BRAFLDRAFT_70033 [Branchiostoma floridae]
Length = 1493
Score = 35.9 bits (80), Expect = 6.7, Method: Composition-based stats.
Identities = 22/196 (11%), Positives = 48/196 (24%), Gaps = 6/196 (3%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAF------VQYSAGKYQQAAS 115
+ + KA YF Q + + + A ++ A
Sbjct: 1141 NLGEAWCNLGDGRKAISYFEQALQMLRSIYGQNIANVHIALSLNNLGQAWNNLGDYSTAI 1200
Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
+ Q S D + + + + + Y + ++
Sbjct: 1201 HYLKQALQMCRSIYGDGTAHPDIATSLNNLGFAWGKLGDCRKAIGYHEQALQMNKAIHGQ 1260
Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
A N LA +G Y + + + + + H ++ L
Sbjct: 1261 DTAHPDTATSLNNLAEAFNSLGDYSTAINYHEQVLQMHESIYGQNATHPHIATSLYNLGS 1320
Query: 236 AYVALALMDEAREVVS 251
A+ L +A
Sbjct: 1321 AWYNLGDYRKAISYYE 1336
>gi|270012187|gb|EFA08635.1| hypothetical protein TcasGA2_TC006298 [Tribolium castaneum]
Length = 553
Score = 35.9 bits (80), Expect = 6.8, Method: Composition-based stats.
Identities = 24/197 (12%), Positives = 54/197 (27%), Gaps = 11/197 (5%)
Query: 65 VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY 124
+LK+++++ A P + + AF Q + K +
Sbjct: 31 EDYLKKRDYTGAMTLLEFMQIQEPDVNIDLW-MGYCAFHQGNYKKALTIYENLLKSKPDL 89
Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184
Y Y + + + + + ++ V
Sbjct: 90 DNLAVNLACCYFYLGMYEESKEILQKSGPSGLKTRLNFHLSHKLRDEAALMEHHEQLQDV 149
Query: 185 GRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM-ARLVEAYVALALM 243
+QL+ + R + + + Q A+ + Y L
Sbjct: 150 LEDQLSLAAIHYLRAHYQEAIDIYKRLLLQNRNNL---------ALNVYVALCYYKLDYY 200
Query: 244 DEAREVVSLIQERYPQG 260
D ++EV++L +YP
Sbjct: 201 DVSQEVLTLYLNQYPDS 217
>gi|299821234|ref|ZP_07053122.1| conserved hypothetical protein [Listeria grayi DSM 20601]
gi|299816899|gb|EFI84135.1| conserved hypothetical protein [Listeria grayi DSM 20601]
Length = 288
Score = 35.9 bits (80), Expect = 6.8, Method: Composition-based stats.
Identities = 6/41 (14%), Positives = 18/41 (43%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQRE 59
+ K + F I++ L +++ DS + + +++
Sbjct: 1 MKKSLFFLIFIISIVLLASCSQKNDTPATSDSSSSKQEKQD 41
>gi|124009354|ref|ZP_01694032.1| TPR repeat [Microscilla marina ATCC 23134]
gi|123985016|gb|EAY24967.1| TPR repeat [Microscilla marina ATCC 23134]
Length = 220
Score = 35.9 bits (80), Expect = 6.8, Method: Composition-based stats.
Identities = 16/210 (7%), Positives = 54/210 (25%), Gaps = 14/210 (6%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
K TI F C L D+ + E+ ++ ++ + A +
Sbjct: 1 MKLTQTICFLGIACLLFLRVSVVPGQTDNDTPPPEKSVAELLKEGEAKYQKGDILGAIKN 60
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
+N ++ +A + + + + ++ +
Sbjct: 61 YNAVIEKQAYSAIAYQKRARCKRRIQNYPGAIKDYEKAIQLKSELANAYIG--------- 111
Query: 140 SYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRY 199
+ K ++ +R ++ Y+ + + ++ + + +
Sbjct: 112 -----KAQTYVAMKNHKKAIKDYARALDLQPPKKYLPLIHYNKGLAHLEIKDYKEAMTDF 166
Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
+ + Y ++ A
Sbjct: 167 NKAIELHPKMAKAYLNRGNIYYHFNKSKRA 196
>gi|120599217|ref|YP_963791.1| tetratricopeptide domain-containing protein [Shewanella sp.
W3-18-1]
gi|146292709|ref|YP_001183133.1| tetratricopeptide domain-containing protein [Shewanella
putrefaciens CN-32]
gi|120559310|gb|ABM25237.1| Tetratricopeptide domain protein [Shewanella sp. W3-18-1]
gi|145564399|gb|ABP75334.1| Tetratricopeptide domain protein [Shewanella putrefaciens CN-32]
gi|319426013|gb|ADV54087.1| tol-pal system protein YbgF [Shewanella putrefaciens 200]
Length = 249
Score = 35.9 bits (80), Expect = 6.8, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 33/79 (41%), Gaps = 2/79 (2%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
LK +Y AIP F+ + Y D+ +A A L + + EA++ +
Sbjct: 130 YESAVNLVLKERKYDDAIPAFRAFIKQYPDSVYAANANYWLGQLLFNKSEFAEAKQAFNT 189
Query: 253 IQERYPQGYWARYVETLVK 271
+ R+ + ++LVK
Sbjct: 190 VVVRFSDSN--KRGDSLVK 206
>gi|91088387|ref|XP_972439.1| PREDICTED: similar to Tetratricopeptide repeat protein 26 (TPR
repeat protein 26) [Tribolium castaneum]
Length = 554
Score = 35.9 bits (80), Expect = 6.8, Method: Composition-based stats.
Identities = 24/197 (12%), Positives = 54/197 (27%), Gaps = 11/197 (5%)
Query: 65 VLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQY 124
+LK+++++ A P + + AF Q + K +
Sbjct: 32 EDYLKKRDYTGAMTLLEFMQIQEPDVNIDLW-MGYCAFHQGNYKKALTIYENLLKSKPDL 90
Query: 125 PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTV 184
Y Y + + + + + ++ V
Sbjct: 91 DNLAVNLACCYFYLGMYEESKEILQKSGPSGLKTRLNFHLSHKLRDEAALMEHHEQLQDV 150
Query: 185 GRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM-ARLVEAYVALALM 243
+QL+ + R + + + Q A+ + Y L
Sbjct: 151 LEDQLSLAAIHYLRAHYQEAIDIYKRLLLQNRNNL---------ALNVYVALCYYKLDYY 201
Query: 244 DEAREVVSLIQERYPQG 260
D ++EV++L +YP
Sbjct: 202 DVSQEVLTLYLNQYPDS 218
>gi|44662948|gb|AAS47565.1| pullulanase type I [Anaerobranca gottschalkii]
Length = 865
Score = 35.9 bits (80), Expect = 6.8, Method: Composition-based stats.
Identities = 7/41 (17%), Positives = 12/41 (29%)
Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRY 56
++L K I F + FL G + +
Sbjct: 1 MFKLRKLTPFILFLFIITFLAGCGSKDVTQPPQQEEPEDLS 41
>gi|118354513|ref|XP_001010518.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89292285|gb|EAR90273.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 1619
Score = 35.9 bits (80), Expect = 6.8, Method: Composition-based stats.
Identities = 23/192 (11%), Positives = 45/192 (23%)
Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
Y + + +A + + +C P +L ++ + + Q+ E
Sbjct: 817 YYNLGNAYKAKGLLDEAIKSYQKCLETNPKNNFCYNNLGIAYNEKGLHDEAIQSYQKCLE 876
Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
N + Y + I+ + + Y A
Sbjct: 877 INPNNDVCYNNLGIAYNQKGLQDEAIQSYQKYLEINPKDDVCYNNLGNAYKGKGLHDEAI 936
Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
+ + E Q L + + L AY A
Sbjct: 937 QSYQKCLEINPKNDGCHENLGIAYNEKGLQDEAIQYYLQCLEINPNKDSCYQNLGNAYKA 996
Query: 240 LALMDEAREVVS 251
L DEA +
Sbjct: 997 KGLYDEAIKSYQ 1008
Score = 35.2 bits (78), Expect = 9.6, Method: Composition-based stats.
Identities = 21/190 (11%), Positives = 46/190 (24%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
+ + ++ +A + + +C P +L + + + + Q+ E
Sbjct: 1023 NLGIAYNEKGLQDEAIQSYQKCLEINPNKDSCYNNLGNAYYEKGFQDEAIQSYQKCLEIN 1082
Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
+ N + Y + I+ + + Y A
Sbjct: 1083 PKNEGCYNNLGIAYNEKGLQDEAIQSYQKYLEINPKNDACYNNLGNAYQAKGLQDEAIKQ 1142
Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
E + Q + + L AY A
Sbjct: 1143 YQKCLEINPKNEGCYENLGNAYNQKGLQDEAIQSYQKCLEMNPNKDSCYYNLGNAYKAKG 1202
Query: 242 LMDEAREVVS 251
L+DEA +
Sbjct: 1203 LLDEAIKSYQ 1212
>gi|225376603|ref|ZP_03753824.1| hypothetical protein ROSEINA2194_02245 [Roseburia inulinivorans DSM
16841]
gi|225211486|gb|EEG93840.1| hypothetical protein ROSEINA2194_02245 [Roseburia inulinivorans DSM
16841]
Length = 397
Score = 35.9 bits (80), Expect = 6.8, Method: Composition-based stats.
Identities = 25/219 (11%), Positives = 59/219 (26%)
Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
D + Y + ++LK+ N A F++ ++ ++ + K ++
Sbjct: 136 DKKAADAYYLRGCVYLKQGNTEGAVSDFDEAVKNNSSDYELYVNIYENLSAYDMTEKGEE 195
Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
+ + E Y Y ++ ++ V
Sbjct: 196 YLNKAFDIKGNSAEDYAWRGRIYYDLGQYDNAQTELKSALDKESVIANLYIAQVYEAQGD 255
Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232
P + V ++ + + + + + E M
Sbjct: 256 PENAETYYQNYVNSGSADSQAMNALGEIEMAKGNYSGALTYLEQGIAMENVTNRRELMQN 315
Query: 233 LVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
L+ Y + + A VV + YP A+ +K
Sbjct: 316 LIICYEYTSDFNSAWNVVQEYVQVYPDDASAQREYIFLK 354
>gi|159484104|ref|XP_001700100.1| intraflagellar transport particle protein 88 [Chlamydomonas
reinhardtii]
gi|158272596|gb|EDO98394.1| intraflagellar transport particle protein 88 [Chlamydomonas
reinhardtii]
Length = 782
Score = 35.9 bits (80), Expect = 6.8, Method: Composition-based stats.
Identities = 22/202 (10%), Positives = 53/202 (26%), Gaps = 6/202 (2%)
Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA-GVARKSLLMSAFVQYSAGKYQQAAS 115
+Y ++ + A F + P V + + +
Sbjct: 507 VEAIYNLGLVSQRLNELPYALAAFKKLHNMVPDNVEVIHQIATTYDMMGDFKNAVKWFEL 566
Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
L + ++ + + M + Y
Sbjct: 567 LTSLVSNDPGVLARLGAIHARFDDEAKALHYYQESHRVYPVNMDVISWLGAYHVKSEVYE 626
Query: 176 KGARFYVTVGRNQLAAKEVE--IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
K F+ + Q + + Y + AA+ +++ + + D E + L
Sbjct: 627 KAMPFFDLASKIQPQEVKWALMVASCYRRTNNLPAALGKYKQIHTQHPD---NVECLRYL 683
Query: 234 VEAYVALALMDEAREVVSLIQE 255
V L EA E ++ +++
Sbjct: 684 VHLCSELGRRAEAAEYMTKLKK 705
>gi|117920970|ref|YP_870162.1| hypothetical protein Shewana3_2529 [Shewanella sp. ANA-3]
gi|117613302|gb|ABK48756.1| conserved hypothetical protein [Shewanella sp. ANA-3]
Length = 250
Score = 35.9 bits (80), Expect = 6.8, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 33/79 (41%), Gaps = 2/79 (2%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
LK +Y AIP F+ + Y D+ +A A L + + EA++ +
Sbjct: 131 YESAVNLVLKERKYDDAIPAFRAFIKQYPDSVYAANANYWLGQLLFNKSEFAEAKQAFNT 190
Query: 253 IQERYPQGYWARYVETLVK 271
+ R+ + ++LVK
Sbjct: 191 VVTRFSDSN--KRGDSLVK 207
>gi|28329439|ref|NP_006522.2| intraflagellar transport protein 88 homolog isoform 2 [Homo
sapiens]
gi|122889169|emb|CAM13405.1| intraflagellar transport 88 homolog (Chlamydomonas) [Homo sapiens]
gi|123233609|emb|CAM20430.1| intraflagellar transport 88 homolog (Chlamydomonas) [Homo sapiens]
Length = 824
Score = 35.9 bits (80), Expect = 6.8, Method: Composition-based stats.
Identities = 21/193 (10%), Positives = 54/193 (27%), Gaps = 7/193 (3%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
KAV +L+++++++A E + A + L + + + +
Sbjct: 420 NKAVTYLRQKDYNQAVEILKVLEKKDSRVKSAAATNLSALYYMGKDFAQASSYADIAVNS 479
Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVP----YDQRATKLMLQYMSRIVERYTNSPYVKG 177
+Y + + + + + + + L + E+
Sbjct: 480 DRYNPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNRLDEALD 539
Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
+ A +I Y AI V++ +++L E Y
Sbjct: 540 CFLKLHAILRNSAEVLYQIANIYELMENPSQAIEWLMQVVSVIPTDPQV---LSKLGELY 596
Query: 238 VALALMDEAREVV 250
+A +
Sbjct: 597 DREGDKSQAFQYY 609
>gi|15678100|ref|NP_275215.1| O-linked GlcNAc transferase [Methanothermobacter thermautotrophicus
str. Delta H]
gi|2621106|gb|AAB84576.1| O-linked GlcNAc transferase [Methanothermobacter thermautotrophicus
str. Delta H]
Length = 403
Score = 35.9 bits (80), Expect = 6.8, Method: Composition-based stats.
Identities = 18/200 (9%), Positives = 47/200 (23%), Gaps = 6/200 (3%)
Query: 55 RYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAA 114
+ Y KA++F + + + +A E + + + P + K +
Sbjct: 184 EFVEAWYNKALIFEELKRYDEALECYGRALQIDPQDDGTWNNKGALLDTIGKPEKAIECY 243
Query: 115 SLGEEYITQYPESKNVDYVYYLVGMSYAQM---IRDVPYDQRATKLMLQYMSRIVERYTN 171
E + ++ N V Y + ++ +
Sbjct: 244 EKALEINQKNAKAWNNKGVVLEELKRYDEALECYEKALEINLENDETWANKGVLLRKLGK 303
Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231
+ A G + A+ ++ L +
Sbjct: 304 YEEALECFEKALEINPEFADAWEWKGIILEDLKKPEEALKCYEKALKLNPQDKTLW---Y 360
Query: 232 RLVEAYVALALMDEAREVVS 251
+ L +A++
Sbjct: 361 MQGKTLQKLGKHQKAKKSYK 380
>gi|298480594|ref|ZP_06998791.1| TPR domain-containing protein [Bacteroides sp. D22]
gi|298273415|gb|EFI14979.1| TPR domain-containing protein [Bacteroides sp. D22]
Length = 590
Score = 35.5 bits (79), Expect = 6.9, Method: Composition-based stats.
Identities = 23/225 (10%), Positives = 57/225 (25%), Gaps = 1/225 (0%)
Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
S ++ L + +Y + +A+ ++ + A+ C P A A +
Sbjct: 35 ASFSVKESLLPAEQQRKYDY-FFLEAMRMKEKNEYDAAFGLLQHCLDINPNASSALYEIS 93
Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
+ Q A + Y + + +
Sbjct: 94 QYYMFLRQVPQGQAALEQAVAFAPDNFWYSQGLVSLYQQQNELDKAVTLLEKMVTRFPSK 153
Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
+ + +++ Y+ + +L E + + FQ + +
Sbjct: 154 QEPLFSLLDIYSRQEKYNDVISTLNRLEKRLGKNEQLSMEKFRIYLQMKDDKKAFQEIES 213
Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
+ L + Y+ EA + + P A
Sbjct: 214 LVQEYPMDMRYQVILGDVYLQNGKKQEAYDAYQKVLAIEPDNPMA 258
>gi|294651489|ref|ZP_06728802.1| type 4 fimbrial biogenesis protein [Acinetobacter haemolyticus ATCC
19194]
gi|292822639|gb|EFF81529.1| type 4 fimbrial biogenesis protein [Acinetobacter haemolyticus ATCC
19194]
Length = 289
Score = 35.5 bits (79), Expect = 6.9, Method: Composition-based stats.
Identities = 25/254 (9%), Positives = 71/254 (27%), Gaps = 14/254 (5%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
K + I + L + S + VR + A +++ ++ A
Sbjct: 29 LKTTIAITVVLIAGGLTACQSTPSTKDP-EKAVQVRT-----QLAAEYIRTRDLDSAKRS 82
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
+Q + A + + + S ++A + + I+ P++ Y
Sbjct: 83 LDQALKLNSRDANANMMMGILLQQEGSKLNMEKADAYFKRAISSEPDNAQARNNYGTYLY 142
Query: 140 SYAQMIRDVPYD--------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
+ + L+ + RI + + +
Sbjct: 143 QMQRYNEAIEQFTRAGATLGYDQRFQSLENLGRIYLLLGDVTNAEKSFKQALQANRNATI 202
Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
+E+ + + A ++ + + A+ + A A + +V+
Sbjct: 203 SMLELSEIFYLQQNNRDASQLYEQYVRSVGQRNQGARALWIGIRIARANADQLGMQVLVN 262
Query: 252 LIQERYPQGYWARY 265
++ +P +
Sbjct: 263 QLRALFPDSPEYQR 276
>gi|282891878|ref|ZP_06300357.1| hypothetical protein pah_c200o023 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281498138|gb|EFB40478.1| hypothetical protein pah_c200o023 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 322
Score = 35.5 bits (79), Expect = 6.9, Method: Composition-based stats.
Identities = 24/190 (12%), Positives = 60/190 (31%), Gaps = 4/190 (2%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
+ Y V E+N+ +A + F +F + A+K+L + +
Sbjct: 25 KELATQPMHVHYNLGVEAYNEENWHEAVKQFTVVVSNFSSSSWAQKALFFLGIANFHLDE 84
Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
+ + EY+ +K + + R L + + +
Sbjct: 85 FDFSNQYFTEYL----SAKGCPEHFEEAIEYKFAIAEKFREGARRHLLGTKRLPKWASGE 140
Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
+ + + ++ A G Y + ++ ++ F L++ + E A E+
Sbjct: 141 SLALQIYDEVTAAMPSQDIAAKALYCKGLYLWELKDFRESVDSFYLLIRRFPKHELAPES 200
Query: 230 MARLVEAYVA 239
+ Y+
Sbjct: 201 YVAISRVYLE 210
>gi|38637810|ref|NP_942784.1| hypothetical protein PHG146 [Ralstonia eutropha H16]
gi|32527148|gb|AAP85898.1| conserved hypothetical protein [Ralstonia eutropha H16]
Length = 166
Score = 35.5 bits (79), Expect = 6.9, Method: Composition-based stats.
Identities = 16/136 (11%), Positives = 39/136 (28%), Gaps = 2/136 (1%)
Query: 136 LVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
+ P ++ L++ + + + + Y LA
Sbjct: 30 QHASVEDRQGTSQPGEKPEYDAALKHFQAGDFKSAGNAFSSFIKKYPQSPYLPLAQY--W 87
Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
+G + +Y + ++ +AM + + RE + +
Sbjct: 88 LGNSLYAQRDYKGSTWVLHKMIDANPRHPKVPDAMIAVANNQLESGQKAAGRETLEQVVA 147
Query: 256 RYPQGYWARYVETLVK 271
+YP AR + +K
Sbjct: 148 KYPGTEGARAADNRLK 163
Score = 35.5 bits (79), Expect = 8.5, Method: Composition-based stats.
Identities = 11/74 (14%), Positives = 25/74 (33%)
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
Y+ A+ + +F A F+ + +P + + Y+ Y+ + + +
Sbjct: 49 YDAALKHFQAGDFKSAGNAFSSFIKKYPQSPYLPLAQYWLGNSLYAQRDYKGSTWVLHKM 108
Query: 121 ITQYPESKNVDYVY 134
I P V
Sbjct: 109 IDANPRHPKVPDAM 122
>gi|37572247|gb|AAH30776.2| Intraflagellar transport 88 homolog (Chlamydomonas) [Homo sapiens]
Length = 833
Score = 35.5 bits (79), Expect = 6.9, Method: Composition-based stats.
Identities = 21/193 (10%), Positives = 54/193 (27%), Gaps = 7/193 (3%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
KAV +L+++++++A E + A + L + + + +
Sbjct: 429 NKAVTYLRQKDYNQAVEILKVLEKKDSRVKSAAATNLSALYYMGKDFAQASSYADIAVNS 488
Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVP----YDQRATKLMLQYMSRIVERYTNSPYVKG 177
+Y + + + + + + + L + E+
Sbjct: 489 DRYNPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNRLDEALD 548
Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
+ A +I Y AI V++ +++L E Y
Sbjct: 549 CFLKLHAILRNSAEVLYQIANIYELMENPSQAIEWLMQVVSVIPTDPQV---LSKLGELY 605
Query: 238 VALALMDEAREVV 250
+A +
Sbjct: 606 DRGGDKSQAFQYY 618
>gi|296203513|ref|XP_002748928.1| PREDICTED: intraflagellar transport protein 88 homolog [Callithrix
jacchus]
Length = 786
Score = 35.5 bits (79), Expect = 6.9, Method: Composition-based stats.
Identities = 22/193 (11%), Positives = 54/193 (27%), Gaps = 7/193 (3%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
KAV +L+++++++A E + A + L + + + +
Sbjct: 420 NKAVTYLRQRDYNQAVEILKMLEKKDSRVKSAAATNLSALYYMGKDFAQASSYADIAVNS 479
Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVP----YDQRATKLMLQYMSRIVERYTNSPYVKG 177
+Y + + + + + + + L + E+
Sbjct: 480 DRYNPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNVGLTYEKMNRLDEALD 539
Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
+ A +I Y AI V++ +A+L E Y
Sbjct: 540 CFLKLHAILRNSAEVLYQIANIYELMENLSEAIEWLMQVVSVVPTNPQV---LAKLGELY 596
Query: 238 VALALMDEAREVV 250
+A +
Sbjct: 597 DREGDKSQAFQYY 609
>gi|237665587|ref|ZP_04525575.1| secretion protein HlyD family protein [Clostridium butyricum E4
str. BoNT E BL5262]
gi|237658534|gb|EEP56086.1| secretion protein HlyD family protein [Clostridium butyricum E4
str. BoNT E BL5262]
Length = 329
Score = 35.5 bits (79), Expect = 6.9, Method: Composition-based stats.
Identities = 7/42 (16%), Positives = 15/42 (35%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV 60
+ K + I + I + L G + + + Q E+
Sbjct: 1 MKKIQIGIVYLILIALLSGCSIANKKAENNNEQITDNVQEEI 42
>gi|148380571|ref|YP_001255112.1| putative thiosulfate sulfurtransferase [Clostridium botulinum A
str. ATCC 3502]
gi|153932911|ref|YP_001384858.1| putative thiosulfate sulfurtransferase [Clostridium botulinum A
str. ATCC 19397]
gi|153934630|ref|YP_001388328.1| putative thiosulfate sulfurtransferase [Clostridium botulinum A
str. Hall]
gi|148290055|emb|CAL84174.1| rhodanese-like protein [Clostridium botulinum A str. ATCC 3502]
gi|152928955|gb|ABS34455.1| putative thiosulfate sulfurtransferase [Clostridium botulinum A
str. ATCC 19397]
gi|152930544|gb|ABS36043.1| putative thiosulfate sulfurtransferase [Clostridium botulinum A
str. Hall]
Length = 324
Score = 35.5 bits (79), Expect = 6.9, Method: Composition-based stats.
Identities = 21/225 (9%), Positives = 54/225 (24%), Gaps = 20/225 (8%)
Query: 18 QLYKFALTIFFSIAVCF------LVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQ 71
++ K F SI +CF G SS Q+E Y+ + ++
Sbjct: 2 KMKKNFFKSFSSIILCFVLGVIIFTGCSNSSSNKEETKDKKQETTQKESYKDS-SYIISS 60
Query: 72 NFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
++ + Q + D
Sbjct: 61 DW----------LSKNLNKDNVIIVDARPDKDYKKGHIPGAINVQWPYFTNQEGKPGEKD 110
Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
+ L ++ + + D+ T + ++
Sbjct: 111 WGMLLPEKELSKKLSSLGIDKNKTIVAYAENKSGWGEDGRIIWMLRMVGIENSKMLNGGF 170
Query: 192 KEVEIGRYYLKRGEYVAAIPRFQLVLAN---YSDAEHAEEAMARL 233
+ + + + F + + Y+D + +E + ++
Sbjct: 171 DYWKNKSLEISKDDVTPKKSDFVVENMDKSMYADTKWVKENLDKI 215
>gi|262280924|ref|ZP_06058707.1| type 4 fimbrial biogenesis protein [Acinetobacter calcoaceticus
RUH2202]
gi|262257824|gb|EEY76559.1| type 4 fimbrial biogenesis protein [Acinetobacter calcoaceticus
RUH2202]
Length = 266
Score = 35.5 bits (79), Expect = 7.0, Method: Composition-based stats.
Identities = 24/243 (9%), Positives = 67/243 (27%), Gaps = 13/243 (5%)
Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90
G + ++ + VR + A ++ + A +Q
Sbjct: 16 VALLASGCQTTHTQKKDPEKAVKVRT-----QLAAEHIRSGDLDSAKRALDQALSVDSRD 70
Query: 91 GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150
A + + + S ++A + I+ P++ Y + +
Sbjct: 71 ATANMMMGILLQQEGSKPNLEKAEHYFKRAISSEPDNAQAHNNYGTYLYQMERYNDAIEQ 130
Query: 151 D--------QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
L+ + RI + + + + +E+ +
Sbjct: 131 FRIAGTTLGYDQRYQALENLGRIYLKLGDVANAEKTFKQSLLANRDSYISMLELAEIFYL 190
Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
+ + AA ++ + A+ V A A + +V+ ++ +P+
Sbjct: 191 QQQIPAATQMYEQYVRTVGQKNQGARALWIGVRVARANADKMGMQVLVNQLRALFPESPE 250
Query: 263 ARY 265
+
Sbjct: 251 YQR 253
>gi|298529209|ref|ZP_07016612.1| hypothetical protein Dthio_PD1920 [Desulfonatronospira
thiodismutans ASO3-1]
gi|298510645|gb|EFI34548.1| hypothetical protein Dthio_PD1920 [Desulfonatronospira
thiodismutans ASO3-1]
Length = 263
Score = 35.5 bits (79), Expect = 7.0, Method: Composition-based stats.
Identities = 24/248 (9%), Positives = 67/248 (27%), Gaps = 8/248 (3%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKE--QNFSKA 76
+ + IF + L G + D + + + +A ++
Sbjct: 1 MKRLLYIIFPVLIFFMLPGC-LEQKEDTDDFDQAEYYFSTGQFNQARNLYQQYIDENEHG 59
Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
+ + +R + + + + I K
Sbjct: 60 RKRYQAWNRLLSISVDIYNDIEGGLDILKAMQMEYDGELDTILDINARIAGKYDRLGQPR 119
Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196
+ +++ + K ++S+ + V+ + + A+ +
Sbjct: 120 ESRRLWKKNKELAQSGKERKKAALFLSKTGIQLREFERVREDLEKFSDCSGETDAELCSM 179
Query: 197 GRYYLKRGEY-----VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
Y + Y A + + E+ A L E + +D+A +++
Sbjct: 180 IHYTRGKSYYLENDLTRAGEVLSRAYSLDAGNEYRSRAGLLLTEVLLDQDKVDQAVDLLK 239
Query: 252 LIQERYPQ 259
I + +P
Sbjct: 240 EILDIHPN 247
>gi|224088480|ref|XP_002308458.1| predicted protein [Populus trichocarpa]
gi|222854434|gb|EEE91981.1| predicted protein [Populus trichocarpa]
Length = 934
Score = 35.5 bits (79), Expect = 7.0, Method: Composition-based stats.
Identities = 29/242 (11%), Positives = 63/242 (26%), Gaps = 12/242 (4%)
Query: 35 LVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR 94
L G ++ + Y D Y Y V++ + + A + + + + P A
Sbjct: 169 LSGNTQEGIQKYYDALKVDPHYAPAYYNLGVVYSEMMQYDTALSCYEKAAIERPMYAEAY 228
Query: 95 KSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRA 154
++ + + + +KN + + ++ D+
Sbjct: 229 CNMGVIYKNRGDLESAIACYERCLAVSPNFEIAKNNMAIALTDLGTKVKLEGDINQGVTY 288
Query: 155 TKLMLQYMSRIVERYTN--SPYVKGARFYVTVGRNQLAAKEVEIGRYY-LKRGEYVAAIP 211
K L Y + N Y + +F + + +LA G
Sbjct: 289 YKKALYYNWHYADAMYNLGVAYGEMLKFEMAIVFYELAFHFNPHCAEACNNLGVIYKDRD 348
Query: 212 RFQLVLANYSDA----EHAEEAMARLVEAYVALALMDEARE-VVSLIQERYPQGYWARYV 266
+ Y + +++ L Y MD A + I
Sbjct: 349 NLDKAVECYQATLSIKPNFSQSLNNLGVVYTVQGKMDAAASMIEKAIMAN----PTYAEA 404
Query: 267 ET 268
Sbjct: 405 YN 406
>gi|197106555|ref|YP_002131932.1| hypothetical protein PHZ_c3094 [Phenylobacterium zucineum HLK1]
gi|196479975|gb|ACG79503.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1]
Length = 282
Score = 35.5 bits (79), Expect = 7.0, Method: Composition-based stats.
Identities = 14/73 (19%), Positives = 29/73 (39%)
Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
+ G+ RG + A + + + A +A+ L + VAL +A
Sbjct: 190 QRTPEARYWWGKTLSVRGAHNDAATAYIGAIRGWPQTSWAPDAVVELARSLVALKKPQDA 249
Query: 247 REVVSLIQERYPQ 259
++ + +RYP+
Sbjct: 250 CRTLAELPKRYPK 262
>gi|88602724|ref|YP_502902.1| tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1]
gi|88188186|gb|ABD41183.1| Tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1]
Length = 1067
Score = 35.5 bits (79), Expect = 7.0, Method: Composition-based stats.
Identities = 25/205 (12%), Positives = 53/205 (25%), Gaps = 8/205 (3%)
Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
++ + +A + + P A ++ + S ++ E
Sbjct: 377 GDTQIERGQYQEAIAAYEKALELDPENPTAWNQRGLALRLLDSHPAALESFEHAAETKNA 436
Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPY---DQRATKLMLQYMSRIVERYTNSPYVKGARF 180
PES + Y Q + + + + A
Sbjct: 437 KPESWINHAITSFELGEYHQSVHSFERACKFGPIPSDSWLIYLNALAYEHENQKLIKASE 496
Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
A +G + +Y AA+ F+ L D +A+ + L
Sbjct: 497 RFIELFGPDAEVLFLLGVAQYELKQYEAALHHFRETLKLDKDHT---DALFWAGLTLLEL 553
Query: 241 ALMDEAREVVSLIQERYPQGY--WA 263
EA +++ +P W
Sbjct: 554 YQFTEAITAFEGVEDNHPDDDQAWY 578
>gi|28558993|ref|NP_783195.2| intraflagellar transport protein 88 homolog isoform 1 [Homo
sapiens]
gi|206729873|sp|Q13099|IFT88_HUMAN RecName: Full=Intraflagellar transport protein 88 homolog; AltName:
Full=Recessive polycystic kidney disease protein Tg737
homolog; AltName: Full=Tetratricopeptide repeat protein
10; Short=TPR repeat protein 10
gi|122889168|emb|CAH70874.2| intraflagellar transport 88 homolog (Chlamydomonas) [Homo sapiens]
gi|123233608|emb|CAI14390.2| intraflagellar transport 88 homolog (Chlamydomonas) [Homo sapiens]
Length = 833
Score = 35.5 bits (79), Expect = 7.0, Method: Composition-based stats.
Identities = 21/193 (10%), Positives = 54/193 (27%), Gaps = 7/193 (3%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
KAV +L+++++++A E + A + L + + + +
Sbjct: 429 NKAVTYLRQKDYNQAVEILKVLEKKDSRVKSAAATNLSALYYMGKDFAQASSYADIAVNS 488
Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVP----YDQRATKLMLQYMSRIVERYTNSPYVKG 177
+Y + + + + + + + L + E+
Sbjct: 489 DRYNPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNRLDEALD 548
Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
+ A +I Y AI V++ +++L E Y
Sbjct: 549 CFLKLHAILRNSAEVLYQIANIYELMENPSQAIEWLMQVVSVIPTDPQV---LSKLGELY 605
Query: 238 VALALMDEAREVV 250
+A +
Sbjct: 606 DREGDKSQAFQYY 618
>gi|260589297|ref|ZP_05855210.1| putative tetratricopeptide repeat-containing domain protein
[Blautia hansenii DSM 20583]
gi|260540378|gb|EEX20947.1| putative tetratricopeptide repeat-containing domain protein
[Blautia hansenii DSM 20583]
Length = 497
Score = 35.5 bits (79), Expect = 7.1, Method: Composition-based stats.
Identities = 8/42 (19%), Positives = 17/42 (40%)
Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
M +L +AY + A + I + +P A + ++
Sbjct: 418 MFQLAQAYDKKGDKENANQWYQKIIDEFPGTKAASDAKDYLE 459
>gi|225551900|ref|ZP_03772840.1| FF domain protein [Borrelia sp. SV1]
gi|225370898|gb|EEH00328.1| FF domain protein [Borrelia sp. SV1]
Length = 903
Score = 35.5 bits (79), Expect = 7.1, Method: Composition-based stats.
Identities = 23/219 (10%), Positives = 60/219 (27%)
Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
+ +VY Q + Y+ ++ K + + + E F+Q + P A + ++
Sbjct: 544 KAENVYEKITKLTNTQEDHYKLGIIRFKLKKYEHSIESFDQTIKLDPKHKKALHNKGIAL 603
Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
+ K ++ + Y + + Q K
Sbjct: 604 MMLNKNKKAIESFEKAIQIDKNYGTAYYQKGIAEEKNGDMQQAFASFKNAYNLYKNPNYA 663
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
+ + + + + N E+ I + + E + +
Sbjct: 664 LKAGIVSNNLGNFKQSEEYLNFFNANAKKPNEIAIYNLSIAKFENNKLEESLETINKAID 723
Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
E + + A + SL+ ++ P+
Sbjct: 724 LNPEKSEYLYLKASINLKKENYQNAIPLYSLVIKKNPEN 762
>gi|91202613|emb|CAJ72252.1| Hypothetical Protein kustd1507 [Candidatus Kuenenia
stuttgartiensis]
Length = 700
Score = 35.5 bits (79), Expect = 7.1, Method: Composition-based stats.
Identities = 26/199 (13%), Positives = 50/199 (25%), Gaps = 6/199 (3%)
Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
Y +++ + KA F++ P + A ++ + F + + +
Sbjct: 471 KNDYPEGHNSLGTMYIDKGLTDKAISEFSKAIHYDPASSYAYYNMGNAYFDKNALDECIV 530
Query: 113 AASLGEEYITQYPESKNV---DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
+ + P+ N Y+ + R Y + I
Sbjct: 531 FFNKAIQLNMHKPQVFNNLGSAYLKKGNPDAAIAQYRKALYIYPGYAEAHSNLGFIYTET 590
Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
A +G Y ++G + A F + A
Sbjct: 591 NRFEEALSELKKALRLNPDHANAHNNLGALYCRQGLWDLAEMEFLSSIRANPRNIG---A 647
Query: 230 MARLVEAYVALALMDEARE 248
L Y EARE
Sbjct: 648 RKNLGIIYFQQGKKQEARE 666
>gi|289423758|ref|ZP_06425553.1| hypothetical protein HMPREF0631_0959 [Peptostreptococcus
anaerobius 653-L]
gi|289155797|gb|EFD04467.1| hypothetical protein HMPREF0631_0959 [Peptostreptococcus
anaerobius 653-L]
Length = 238
Score = 35.5 bits (79), Expect = 7.1, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 26/81 (32%), Gaps = 14/81 (17%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K LTI I++ L G S E+ A F++E + KA
Sbjct: 1 MKKRLLTIVVLISMISLSGCGFSESG--------------ELMSDARKFIEEGQYDKAMS 46
Query: 79 YFNQCSRDFPFAGVARKSLLM 99
++ + AR
Sbjct: 47 NLSKVISEDESNTEARGMYYQ 67
>gi|242242201|ref|ZP_04796646.1| ABC superfamily ATP binding cassette transporter, binding protein
[Staphylococcus epidermidis W23144]
gi|242234374|gb|EES36686.1| ABC superfamily ATP binding cassette transporter, binding protein
[Staphylococcus epidermidis W23144]
Length = 270
Score = 35.5 bits (79), Expect = 7.1, Method: Composition-based stats.
Identities = 10/70 (14%), Positives = 20/70 (28%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K I L ++ + E+ EKA LK++ + +
Sbjct: 1 MKKLFGIILVLALTIALAACGGGKDKEKTITVGASPAPHAEILEKAKPLLKKKGYDLKIK 60
Query: 79 YFNQCSRDFP 88
N +
Sbjct: 61 PINDYTTPNK 70
>gi|254411761|ref|ZP_05025537.1| Tetratricopeptide repeat family [Microcoleus chthonoplastes PCC
7420]
gi|196181483|gb|EDX76471.1| Tetratricopeptide repeat family [Microcoleus chthonoplastes PCC
7420]
Length = 1282
Score = 35.5 bits (79), Expect = 7.1, Method: Composition-based stats.
Identities = 26/234 (11%), Positives = 63/234 (26%), Gaps = 30/234 (12%)
Query: 48 LDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP---FAGVARKSLLMSAFVQ 104
+ V+ + ++Y++ ++ ++ +A F Q +L V
Sbjct: 466 YKAPLPVKREVQLYQEGRQLSQKGDYQEALGKFQQVLVIHQENGNKAEEGTTLNQIGLVY 525
Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM------ 158
+ G+Y +A ++ + + + + D +
Sbjct: 526 SNVGEYAKALDFYQQALAIPEQVVGNTGAIHYNIGRVYSQLGDYNQALDFYQKASALAQE 585
Query: 159 ----------LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA-KEVEIGRYYLKRGEYV 207
+ + + + N +A K++ G G+
Sbjct: 586 RSYKSGEVRIINAIGNVHSKLGQYDLALEFYQQALAVLNTVAFDKKLLEGATLNNIGQVY 645
Query: 208 AAIPRFQLVLANYSDAEHAEE----------AMARLVEAYVALALMDEAREVVS 251
++L L Y A ++ + + EAYV L A
Sbjct: 646 RHQGNYELALDLYQQALAIQKQLGSQGGEGVILDNMGEAYVQLGKYKTALAYYQ 699
>gi|56963352|ref|YP_175083.1| hypothetical protein ABC1587 [Bacillus clausii KSM-K16]
gi|56909595|dbj|BAD64122.1| conserved hypothetical protein [Bacillus clausii KSM-K16]
Length = 219
Score = 35.5 bits (79), Expect = 7.1, Method: Composition-based stats.
Identities = 18/198 (9%), Positives = 51/198 (25%), Gaps = 7/198 (3%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
+ + +++ N+ +A + F + P ++ + E
Sbjct: 4 QAGIELMRKGNYEEAAKQFAAYIEENPKEPTGYINMGNLLAALNDFERALVFYERALELD 63
Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
+ + ++ Q I+ + S Y +G +
Sbjct: 64 HDATVAYYGIGCVHYQQENHQQAIQAFTEALTGGMNEADLFYML----GMSYYSEGKLAH 119
Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
++ E + G +A + + + + +AY L
Sbjct: 120 AQANLSRAYELSSEDSEIVFQYGLCLAQLELLDEARPLFEKTIALDPSH---ADAYYNLG 176
Query: 242 LMDEAREVVSLIQERYPQ 259
++ A + + Q
Sbjct: 177 VVQAASDEAEAALASFNQ 194
>gi|332711804|ref|ZP_08431735.1| glycosyltransferase involved in cell wall biogenesis [Lyngbya
majuscula 3L]
gi|332349782|gb|EGJ29391.1| glycosyltransferase involved in cell wall biogenesis [Lyngbya
majuscula 3L]
Length = 1427
Score = 35.5 bits (79), Expect = 7.2, Method: Composition-based stats.
Identities = 22/206 (10%), Positives = 44/206 (21%), Gaps = 20/206 (9%)
Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
+Y VL + + A + F P + A SL Q +
Sbjct: 808 PEALYGLGVLAQQTGQYDTAEKLFRATVEAEPNSVKAWFSLGNLCQGQGQLSDSVECYQR 867
Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
+ + Q + + +E
Sbjct: 868 VLTI--------------QPNLVPVYNNLGYALQQQGNWDDAIASYQQALEIEPTCTEAD 913
Query: 177 GARFYVTVGRNQLA-AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAE----EAMA 231
+ +LA K+ + + G +A Y A + A
Sbjct: 914 VNLGNALHAQEKLALEKQAHYAQLNHELGVTRQKAGDLTNAVAYYRQAVAMQSDLVSAHY 973
Query: 232 RLVEAYVALALMDEA-REVVSLIQER 256
L + A +++
Sbjct: 974 NLGVVLQDQGEFENAIASYQKVLELN 999
>gi|325265758|ref|ZP_08132445.1| type IV pilus biogenesis/stability protein [Kingella denitrificans
ATCC 33394]
gi|324982741|gb|EGC18366.1| type IV pilus biogenesis/stability protein [Kingella denitrificans
ATCC 33394]
Length = 268
Score = 35.5 bits (79), Expect = 7.2, Method: Composition-based stats.
Identities = 21/258 (8%), Positives = 57/258 (22%), Gaps = 15/258 (5%)
Query: 18 QLYKFALT---IFFSIAVCFLVGW------ERQSSRDVYLDSVTDVRYQREVYEKAVLFL 68
+ F + I + L G + + R + AV ++
Sbjct: 1 MMKNFFIKKHWIIAGCIIGLLSGCVTEGPGATLTKFRSRTSREKNDEAVRIKTQLAVEYM 60
Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
+++ A + +A + + + + ++
Sbjct: 61 NARDYRAATVAIEDALKTNSRYDIAW-LIRAQIYQFLKVYDKAEESFQRALSLSPNGAEI 119
Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
N +Y +Y+ + +D+ G +
Sbjct: 120 NNNYGWYICSIKNNPNAAIPYFDRALADPTYPTPEMAYLNKGICSAKMGQFSLADAYFER 179
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA-----EEAMARLVEAYVALALM 243
+ + +R + + +A+ A
Sbjct: 180 ALGMNPDFIPVFKERARAKLQSGDLSDAGRYFRIYQSRVDQLDADALLLGWRLSKAEGQT 239
Query: 244 DEAREVVSLIQERYPQGY 261
A E + ++ YP
Sbjct: 240 QAAFEYEAQLRANYPYSD 257
>gi|313676765|ref|YP_004054761.1| hypothetical protein [Marivirga tractuosa DSM 4126]
gi|312943463|gb|ADR22653.1| Tetratricopeptide TPR_1 repeat-containing protein [Marivirga
tractuosa DSM 4126]
Length = 469
Score = 35.5 bits (79), Expect = 7.2, Method: Composition-based stats.
Identities = 17/234 (7%), Positives = 50/234 (21%), Gaps = 1/234 (0%)
Query: 32 VCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAG 91
V + +++ + +++ + + + + +A + + +
Sbjct: 110 VLSISNRNKEAIECLEKALTFAEDKDEVLFQMGMAYQQLGKYEEAIKNYKAVLEENIDHE 169
Query: 92 VARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD 151
A L V + + V Y + I Y
Sbjct: 170 SAIYELAYCLDVTDQLEGSIAYYEKFIDADPYSYHAWYNLGVVLHKLGKYEKAIEAYEYA 229
Query: 152 QRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIP 211
+ + Y+ + + R + A
Sbjct: 230 VAIDENFASAYFNMGNTYSALEKNNKSLDAFSQTLRIEGPSAEVFCRMAETYDKLDQADL 289
Query: 212 RFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL-IQERYPQGYWAR 264
+ +EA + + EA I+ + + +
Sbjct: 290 AIKYFQKAVKFDSLYDEAYFGMSLCLIQQEKWIEAVHYSKKAIKINKHESKYWQ 343
>gi|255036713|ref|YP_003087334.1| TPR repeat-containing protein [Dyadobacter fermentans DSM 18053]
gi|254949469|gb|ACT94169.1| TPR repeat-containing protein [Dyadobacter fermentans DSM 18053]
Length = 468
Score = 35.5 bits (79), Expect = 7.2, Method: Composition-based stats.
Identities = 13/193 (6%), Positives = 40/193 (20%)
Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
++ + + A +Y+ + R+ A L + +
Sbjct: 133 EDRDEIYFQIGQTYQNWGKYEDAIKYYKRSLRNNLNNENALYELAHCLDLVGQLESHLGY 192
Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
+ + + + + + + Y ++ Y N
Sbjct: 193 YNDLVDRDPFSHHAWYNLGIAFSKLERHEDAVHAYEYATLIKDDFASAFFQLGNSYMNLE 252
Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
+ A+ + + + ++ L
Sbjct: 253 KFEDAKVQYLRAIELEGNQPETCCCLGTCYEKLGEFETAIKYYRQTVKLDSQWDDGWYGL 312
Query: 234 VEAYVALALMDEA 246
+ L EA
Sbjct: 313 GICFSELGRWYEA 325
>gi|169626489|ref|XP_001806644.1| hypothetical protein SNOG_16534 [Phaeosphaeria nodorum SN15]
gi|160706105|gb|EAT76074.2| hypothetical protein SNOG_16534 [Phaeosphaeria nodorum SN15]
Length = 645
Score = 35.5 bits (79), Expect = 7.2, Method: Composition-based stats.
Identities = 17/219 (7%), Positives = 46/219 (21%), Gaps = 7/219 (3%)
Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
+D + + + A+ ++ ++ +F K +
Sbjct: 213 DDKDWEAHFAELEQTDQNL--DALDAEANKHIEAELNEMDRSVDEFGDFESIWKGIQAET 270
Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
+ + Q+ ++ + T
Sbjct: 271 EYARQLANEESFVEGHMGDLDQWEGFDGLNTHSVRDPAMGDYLFEQDNLFSNVTN----P 326
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
V+ + A + R + + P + +
Sbjct: 327 FDEGVKIMEEGGNLSLAALAFEAAVQKDPNHIAAWTRLGESQAQNEKETPAIRALEHALK 386
Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSL-IQERYPQ 259
EA+ L +Y A + + +YP
Sbjct: 387 QDPSNLEALMGLAVSYTNEGYESTAYRTLERWLATKYPS 425
>gi|115380198|ref|ZP_01467224.1| TPR domain protein, putative [Stigmatella aurantiaca DW4/3-1]
gi|115362798|gb|EAU62007.1| TPR domain protein, putative [Stigmatella aurantiaca DW4/3-1]
Length = 289
Score = 35.5 bits (79), Expect = 7.2, Method: Composition-based stats.
Identities = 34/261 (13%), Positives = 72/261 (27%), Gaps = 17/261 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKE---QNFSK 75
+ + AL F+++ CF ++ D E ++A L + K
Sbjct: 1 MRRLALLALFTLSGCFYPANRGRALEAKVDRLTADNTRMTEELKQAREQLSATLPRIDEK 60
Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
E + + + + Y E+
Sbjct: 61 VAEVTRALEGLDKASRRNDADIGIQLQKTVEDMAQLRGQVETYIYKISELETALARTSEE 120
Query: 136 LVGMSYAQMIRDVPYDQRATKLM--------LQYMSRIVERYTNSPYVKGARFYVTVGRN 187
A + A K + + + + V AR T
Sbjct: 121 SEKKLLALQGSAAVKEAEAKKQAEALQRPTDKKEFLALAQEKAKAGEVLVARQLYTEFLK 180
Query: 188 QLAA------KEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
+ A +G Y + A+ + V+ +++ A +A R + + L
Sbjct: 181 KWAKDALAGEAHFGLGETYFGEDKCREALFEYGKVIQDHTKTPSAPDAYLRSSDCFAKLK 240
Query: 242 LMDEAREVVSLIQERYPQGYW 262
+ DE+R + + + YP+
Sbjct: 241 MKDESRLALEELVKSYPKTEA 261
>gi|32265935|ref|NP_859967.1| hypothetical protein HH0436 [Helicobacter hepaticus ATCC 51449]
gi|32261984|gb|AAP77033.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449]
Length = 281
Score = 35.5 bits (79), Expect = 7.2, Method: Composition-based stats.
Identities = 11/104 (10%), Positives = 32/104 (30%)
Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
+ + K ++ + A +G Y AI ++ ++
Sbjct: 170 MFKKLEYVSAKERFEWLLEIDYKKADSHFYLGEIAFADKSYNTAIYHYKESAMVNDKTKY 229
Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETL 269
+ +++ A+ + + + + YP A+ + L
Sbjct: 230 MPTLLLHTAQSFNAIKDIKNYNKFLDSLIGNYPSSKEAQSAKKL 273
>gi|332840996|ref|XP_003314116.1| PREDICTED: intraflagellar transport protein 88 homolog [Pan
troglodytes]
Length = 805
Score = 35.5 bits (79), Expect = 7.2, Method: Composition-based stats.
Identities = 21/193 (10%), Positives = 54/193 (27%), Gaps = 7/193 (3%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
KAV +L+++++++A E + A + L + + + +
Sbjct: 401 NKAVTYLRQKDYNQAVEILKVLEKKDSRVKSAAATNLSALYYMGKDFAQASSYADIAVNS 460
Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVP----YDQRATKLMLQYMSRIVERYTNSPYVKG 177
+Y + + + + + + + L + E+
Sbjct: 461 DRYNPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNRLDEALD 520
Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
+ A +I Y AI V++ +++L E Y
Sbjct: 521 CFLKLHAILRNSAEVLYQIANIYELMENPSQAIEWLMQVVSVIPTDPQV---LSKLGELY 577
Query: 238 VALALMDEAREVV 250
+A +
Sbjct: 578 DREGDKSQAFQYY 590
>gi|19112511|ref|NP_595719.1| mitochondrial fission protein Fis1 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|74698433|sp|Q9USZ8|FIS1_SCHPO RecName: Full=Mitochondria fission 1 protein
gi|6165477|emb|CAB59803.1| mitochondrial fission protein Fis1 (predicted) [Schizosaccharomyces
pombe]
Length = 160
Score = 35.5 bits (79), Expect = 7.2, Method: Composition-based stats.
Identities = 8/52 (15%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Query: 220 YSDAEHAE-EAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
Y D+ E + + ++ L +E+R ++++ + P A ++ +
Sbjct: 70 YKDSPERRLECLYYIALSHYKLKQYEESRRYLNMLLSKDPNSPEALKLKNRL 121
>gi|329767965|ref|ZP_08259476.1| hypothetical protein HMPREF0428_01173 [Gemella haemolysans M341]
gi|328838450|gb|EGF88058.1| hypothetical protein HMPREF0428_01173 [Gemella haemolysans M341]
Length = 144
Score = 35.5 bits (79), Expect = 7.3, Method: Composition-based stats.
Identities = 12/45 (26%), Positives = 18/45 (40%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKA 64
K L I + FLVG + VY+ V+ + +Y K
Sbjct: 1 MKKILQIISVFLLVFLVGCSEKEGSKVYVKKQPGVQMEITLYYKG 45
>gi|302771664|ref|XP_002969250.1| hypothetical protein SELMODRAFT_170612 [Selaginella moellendorffii]
gi|300162726|gb|EFJ29338.1| hypothetical protein SELMODRAFT_170612 [Selaginella moellendorffii]
Length = 810
Score = 35.5 bits (79), Expect = 7.3, Method: Composition-based stats.
Identities = 11/46 (23%), Positives = 17/46 (36%)
Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
+ Y + A +VE YV MDEA + + +P
Sbjct: 252 HMTELYPQVKPNARTYALIVECYVKFNFMDEAMRHFRALTKLFPGS 297
>gi|261392853|emb|CAX50434.1| putative heme biosynthesis protein HemY [Neisseria meningitidis
8013]
Length = 405
Score = 35.5 bits (79), Expect = 7.3, Method: Composition-based stats.
Identities = 40/279 (14%), Positives = 80/279 (28%), Gaps = 11/279 (3%)
Query: 1 MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV 60
+ VLG+ + A+ L + + F++G + S R
Sbjct: 28 VYIVLGQTMLRINLHAFVLGSLIAVVVWYFLFKFIIGVFNIPEKMQRFGSARKGRKAALA 87
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
KA L E F KA ++ + +L++ A + E
Sbjct: 88 LNKAGLAYFEGRFEKAELEASRVLVNKEAGDNRTLALMLGAHAAGQMENIELRDRYLAEI 147
Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
+ + Y+ + + A M ++R+V + +G
Sbjct: 148 AKLPEKQQLSRYLLLAESALNRRDYEAAEANLHAAAKMNANLTRLVRLQLRYAFDRGDAL 207
Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEY--------VAAIPRFQLVLANYSDAEHAEEAMAR 232
V +L+ + + A + L D+ E
Sbjct: 208 QVLAKTEKLSKAGALGKSEMERYQNWAYRRQLADAADAAALKTCLKRTPDSLKNGELSVS 267
Query: 233 LVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+ E Y L L +A + +++ YP +E V+
Sbjct: 268 VAEKYERLGLYADAVKW---VKQHYPHNRRPELLEAFVE 303
>gi|224113375|ref|XP_002316475.1| predicted protein [Populus trichocarpa]
gi|222865515|gb|EEF02646.1| predicted protein [Populus trichocarpa]
Length = 165
Score = 35.5 bits (79), Expect = 7.3, Method: Composition-based stats.
Identities = 13/99 (13%), Positives = 29/99 (29%), Gaps = 1/99 (1%)
Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVAR-KSLLMSAFV 103
+ LD T Y + +Y +A L++ + S A + C D+ + + R F
Sbjct: 67 KIGLDEATLDTYPKLLYSEAKERLEKGDDSVAASNCSICLADYTDSDLLRLLPECNHLFH 126
Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
+ + + ++
Sbjct: 127 SQCIDPWFKLHTTCPVCRNSPSRPPQREFFGTWFLRFVH 165
>gi|307150578|ref|YP_003885962.1| MCP methyltransferase, CheR-type with Tpr repeats [Cyanothece sp.
PCC 7822]
gi|306980806|gb|ADN12687.1| MCP methyltransferase, CheR-type with Tpr repeats [Cyanothece sp.
PCC 7822]
Length = 434
Score = 35.5 bits (79), Expect = 7.3, Method: Composition-based stats.
Identities = 9/42 (21%), Positives = 13/42 (30%)
Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWA 263
+A L + Y AL EA + + P A
Sbjct: 358 QTPSDPQAYLLLGQIYQALGSEIEAEQYFQKVVYLDPNCEEA 399
>gi|114648901|ref|XP_001147935.1| PREDICTED: intraflagellar transport 88 homolog isoform 7 [Pan
troglodytes]
Length = 796
Score = 35.5 bits (79), Expect = 7.3, Method: Composition-based stats.
Identities = 21/193 (10%), Positives = 54/193 (27%), Gaps = 7/193 (3%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
KAV +L+++++++A E + A + L + + + +
Sbjct: 429 NKAVTYLRQKDYNQAVEILKVLEKKDSRVKSAAATNLSALYYMGKDFAQASSYADIAVNS 488
Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVP----YDQRATKLMLQYMSRIVERYTNSPYVKG 177
+Y + + + + + + + L + E+
Sbjct: 489 DRYNPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNRLDEALD 548
Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
+ A +I Y AI V++ +++L E Y
Sbjct: 549 CFLKLHAILRNSAEVLYQIANIYELMENPSQAIEWLMQVVSVIPTDPQV---LSKLGELY 605
Query: 238 VALALMDEAREVV 250
+A +
Sbjct: 606 DREGDKSQAFQYY 618
>gi|11528335|gb|AAG37228.1|AF298884_1 intraflagellar transport particle protein IFT88 [Chlamydomonas
reinhardtii]
Length = 782
Score = 35.5 bits (79), Expect = 7.3, Method: Composition-based stats.
Identities = 22/202 (10%), Positives = 53/202 (26%), Gaps = 6/202 (2%)
Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA-GVARKSLLMSAFVQYSAGKYQQAAS 115
+Y ++ + A F + P V + + +
Sbjct: 507 VEAIYNLGLVSQRLNELPYALAAFKKLHNMVPDNVEVIHQIATTYDMMGDFKNAVKWFEL 566
Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
L + ++ + + M + Y
Sbjct: 567 LTSLVSNDPGVLARLGAIHARFDDEAKALHYYQESHRVYPVNMDVISWLGAYHVKSEVYE 626
Query: 176 KGARFYVTVGRNQLAAKEVE--IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
K F+ + Q + + Y + AA+ +++ + + D E + L
Sbjct: 627 KAMPFFDLASKIQPQEVKWALMVASCYRRTNNLPAALGKYKQIHTQHPD---NVECLRYL 683
Query: 234 VEAYVALALMDEAREVVSLIQE 255
V L EA E ++ +++
Sbjct: 684 VHLCSELGRRAEAAEYMTKLKK 705
>gi|16127458|ref|NP_422022.1| hypothetical protein CC_3228 [Caulobacter crescentus CB15]
gi|221236271|ref|YP_002518708.1| Tol system periplasmic component YbgF [Caulobacter crescentus
NA1000]
gi|13424912|gb|AAK25190.1| hypothetical protein CC_3228 [Caulobacter crescentus CB15]
gi|220965444|gb|ACL96800.1| Tol system periplasmic component YbgF [Caulobacter crescentus
NA1000]
Length = 284
Score = 35.5 bits (79), Expect = 7.3, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 32/105 (30%), Gaps = 2/105 (1%)
Query: 155 TKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
K + + Y R A +G R Y A +
Sbjct: 163 FKQAKDLLLAGDYANAEQAFAAYVNNYPESARTPEARY--WLGETQFVREAYTDAAGNYI 220
Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
+ + A +A +L + VAL EA + + +RYP+
Sbjct: 221 GAIRGWPQTSWAPDATLKLARSMVALRKTTEACRTLDELAKRYPK 265
>gi|86143498|ref|ZP_01061883.1| putative outer membrane protein, probably involved in nutrient
binding [Leeuwenhoekiella blandensis MED217]
gi|85829945|gb|EAQ48406.1| putative outer membrane protein, probably involved in nutrient
binding [Leeuwenhoekiella blandensis MED217]
Length = 550
Score = 35.5 bits (79), Expect = 7.3, Method: Composition-based stats.
Identities = 24/250 (9%), Positives = 58/250 (23%), Gaps = 25/250 (10%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K +I + + D + A F +F +
Sbjct: 1 MKK---SIILLVLIFAFSSC----------DEDYLDENPEDFLSSANAFTTYDDFLASVN 47
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
R ++ + + + Y + ++ V++ +
Sbjct: 48 NLYFLVRRQYYSRDEERPFDFLYGTDLVYDGEPRNSDRHSFMEAAYNPASSIPTVHWNLY 107
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
+ +++ + + ++ G L EV +
Sbjct: 108 YKTIAETNTIIDRSEGSQMTEEEKASVLAEARFFRGFTYRALAYIYGGVPLVTSEVTAPK 167
Query: 199 YYL----KRGEYVAAIPRFQLVLANYSDAEHAEE--------AMARLVEAYVALALMDEA 246
K A + N E A L E Y+AL +A
Sbjct: 168 VDFVRASKEEVLNQAASDLEYAAQNLPGITEVAEDGRINALTAYHFLAEVYLALGRNTDA 227
Query: 247 REVVSLIQER 256
++ + +
Sbjct: 228 IAALNKVIDN 237
>gi|330825813|ref|YP_004389116.1| tetratricopeptide repeat-containing protein [Alicycliphilus
denitrificans K601]
gi|329311185|gb|AEB85600.1| tetratricopeptide repeat protein [Alicycliphilus denitrificans
K601]
Length = 385
Score = 35.5 bits (79), Expect = 7.4, Method: Composition-based stats.
Identities = 28/228 (12%), Positives = 58/228 (25%), Gaps = 14/228 (6%)
Query: 28 FSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDF 87
+ + G +SR + R + Y K + +L + +A + F + ++
Sbjct: 8 LLLGLPLAFGLGWLASRLDLRQMREENRRAPKAYFKGLNYLLNEQQDQAIDAFIEAVQND 67
Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147
P +L + + + + + A ++
Sbjct: 68 PDTTELHFALGNLFRRRGEYNRAVRVHEHLLSRGDLSRTDRERAQHALALDFLKAGLLDR 127
Query: 148 VPYDQRATK------LMLQYMSRIVERYTNSPYVKGARFYVT-----VGRNQLAAKEVEI 196
R + + I ER + + + A E
Sbjct: 128 AEDALRRLEGTPFEAQARMALLAIYERSRDWAQASDIAQRMQAAQQGDFSTRQAHYLCEQ 187
Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMD 244
RGE AA + +A A A A + + D
Sbjct: 188 ALPLAARGELQAAQALLEQAVA---TAPQAPRARIEMARLQQRMGRPD 232
>gi|253681285|ref|ZP_04862083.1| putative lipoprotein [Clostridium botulinum D str. 1873]
gi|253562523|gb|EES91974.1| putative lipoprotein [Clostridium botulinum D str. 1873]
Length = 360
Score = 35.5 bits (79), Expect = 7.4, Method: Composition-based stats.
Identities = 18/154 (11%), Positives = 46/154 (29%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K+ + V LVG + +V V D++ + EK +L+ + A +
Sbjct: 1 MKKYTSYALIFLTVFMLVGCNNKQYENVKEKDVFDMKIATNIVEKYFNYLELDKYKDAGD 60
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
++ L + + + + + + Y +
Sbjct: 61 MLIGKAKTNTKDITPSDLKLRGHRIVGIMESGGEGNFKIDVMKSNISKPETQILEYVITV 120
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
+ + + K + Q +++ R N
Sbjct: 121 IKSGMDYKISNVNSVLMKEVFQSFNQLRLRKENQ 154
>gi|269120834|ref|YP_003309011.1| hypothetical protein Sterm_2226 [Sebaldella termitidis ATCC
33386]
gi|268614712|gb|ACZ09080.1| conserved hypothetical protein [Sebaldella termitidis ATCC 33386]
Length = 549
Score = 35.5 bits (79), Expect = 7.4, Method: Composition-based stats.
Identities = 11/77 (14%), Positives = 25/77 (32%), Gaps = 1/77 (1%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K F + FLV + ++ + T+V + + + A + +N A
Sbjct: 1 MRKKQKAFLFILGALFLVSCGKTEQKETAAEK-TEVTQEVKTEQTAEISKPAENPYLAAP 59
Query: 79 YFNQCSRDFPFAGVARK 95
+ D +
Sbjct: 60 TYAITHFDSSQSDAFPY 76
>gi|237808311|ref|YP_002892751.1| Tetratricopeptide domain-containing protein [Tolumonas auensis DSM
9187]
gi|237500572|gb|ACQ93165.1| Tetratricopeptide domain protein [Tolumonas auensis DSM 9187]
Length = 385
Score = 35.5 bits (79), Expect = 7.4, Method: Composition-based stats.
Identities = 24/233 (10%), Positives = 57/233 (24%), Gaps = 10/233 (4%)
Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
V +D + Y + FL + KA + F + +L +
Sbjct: 24 VRIDEDRKSSQRSRNYAAGINFLLSEQPDKAVDLFIDLLQVDTDTIDTHLALGNLFRQRG 83
Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY-------DQRATKLM 158
+ + E +N+ + A ++ D
Sbjct: 84 EVDRAIRIHQNLVARCLDSTEQQNLSMLELARDFVAAGLLDRAENVLISLLNDDELADDA 143
Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
+ + +I E+ ++ ++ + +
Sbjct: 144 RKMLLQIYEQLNEWQKAIDIADKLSSKKHHRVV-AHYYCQLAENDASQSDFKTAASRLKR 202
Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
A L + Y+ D+A + + I E +A L++
Sbjct: 203 ALKSDPQCVRAQMLLAQLYIKQQQYDQAIKHIDQIPEL--SSAFASEAWKLLQ 253
>gi|119628671|gb|EAX08266.1| intraflagellar transport 88 homolog (Chlamydomonas), isoform CRA_a
[Homo sapiens]
Length = 796
Score = 35.5 bits (79), Expect = 7.4, Method: Composition-based stats.
Identities = 21/193 (10%), Positives = 54/193 (27%), Gaps = 7/193 (3%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
KAV +L+++++++A E + A + L + + + +
Sbjct: 429 NKAVTYLRQKDYNQAVEILKVLEKKDNRVKSAAATNLSALYYMGKDFAQASSYADIAVNS 488
Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVP----YDQRATKLMLQYMSRIVERYTNSPYVKG 177
+Y + + + + + + + L + E+
Sbjct: 489 DRYNPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNRLDEALD 548
Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
+ A +I Y AI V++ +++L E Y
Sbjct: 549 CFLKLHAILRNSAEVLYQIANIYELMENPSQAIEWLMQVVSVIPTDPQV---LSKLGELY 605
Query: 238 VALALMDEAREVV 250
+A +
Sbjct: 606 DREGDKSQAFQYY 618
>gi|119628672|gb|EAX08267.1| intraflagellar transport 88 homolog (Chlamydomonas), isoform CRA_b
[Homo sapiens]
Length = 795
Score = 35.5 bits (79), Expect = 7.4, Method: Composition-based stats.
Identities = 21/193 (10%), Positives = 54/193 (27%), Gaps = 7/193 (3%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
KAV +L+++++++A E + A + L + + + +
Sbjct: 429 NKAVTYLRQKDYNQAVEILKVLEKKDNRVKSAAATNLSALYYMGKDFAQASSYADIAVNS 488
Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVP----YDQRATKLMLQYMSRIVERYTNSPYVKG 177
+Y + + + + + + + L + E+
Sbjct: 489 DRYNPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNRLDEALD 548
Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
+ A +I Y AI V++ +++L E Y
Sbjct: 549 CFLKLHAILRNSAEVLYQIANIYELMENPSQAIEWLMQVVSVIPTDPQV---LSKLGELY 605
Query: 238 VALALMDEAREVV 250
+A +
Sbjct: 606 DREGDKSQAFQYY 618
>gi|157872758|ref|XP_001684907.1| hypothetical protein [Leishmania major strain Friedlin]
gi|68127977|emb|CAJ06696.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 847
Score = 35.5 bits (79), Expect = 7.4, Method: Composition-based stats.
Identities = 30/209 (14%), Positives = 58/209 (27%), Gaps = 7/209 (3%)
Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
+ ++ +A K N+++A E + P +L +S + + + QA +
Sbjct: 444 KALFNRAFCEDKLMNYTRAIEDYTAALDLDPRNPFTHYNLGISYDHKGNHARATQAFTRA 503
Query: 118 EEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD---QRATKLMLQYMSRIVERYTNSPY 174
E ++P+ + +YA I D + +
Sbjct: 504 IELDDRHPDFYHNRGFTQRKQGAYAAAIADYTTAVSLDPKHFKSHYNRAYCFSKLGRYEE 563
Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLV 234
+ A G + G AA+ F L A+
Sbjct: 564 AVADYAAALQIDSNNANAYHNRGAALAQLGRLEAAVEDFNRALRLNPKLTF---ALNARG 620
Query: 235 EAYVALALMDEA-REVVSLIQERYPQGYW 262
Y L D+A + I+ W
Sbjct: 621 LVYDQLQQYDKALADFTEAIRLDQRNSAW 649
>gi|301311993|ref|ZP_07217915.1| conserved hypothetical protein [Bacteroides sp. 20_3]
gi|300830095|gb|EFK60743.1| conserved hypothetical protein [Bacteroides sp. 20_3]
Length = 553
Score = 35.5 bits (79), Expect = 7.4, Method: Composition-based stats.
Identities = 29/234 (12%), Positives = 60/234 (25%), Gaps = 31/234 (13%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K+ + IF + +VC L+ + RE + +A + E N A
Sbjct: 1 MTKWFVYIFLA-SVCLLLSCGGK--------------SVREKFAEADRLVNENNLDSAAW 45
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+ + + + +Y Y + +
Sbjct: 46 LLEEQITLSALSDSDKAEYGRRLAWLHLLQGRSLVNDSLIDYSVDYYKEHASE------- 98
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
++ L+ + +S Y + Y+ ++L + G
Sbjct: 99 -PLLSAYFVKAIYMGDSRKGLEQRRALYREAIDSAYSRSDSTYLVRFYDRLTSLSFGEGL 157
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
Y + A E A +Y L + D A + L
Sbjct: 158 YRETIADSKEWEAS--------PKAGFKEMAYYMAGLSYSRLRMRDSADYYLRL 203
>gi|195470292|ref|XP_002087442.1| GE16040 [Drosophila yakuba]
gi|194173543|gb|EDW87154.1| GE16040 [Drosophila yakuba]
Length = 1503
Score = 35.5 bits (79), Expect = 7.4, Method: Composition-based stats.
Identities = 28/244 (11%), Positives = 68/244 (27%), Gaps = 16/244 (6%)
Query: 34 FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFN----------QC 83
L ++ + + Y+KA + + A EYF Q
Sbjct: 912 LLQSIGHLDEAVELAETEDRIHLKHTYYQKAQELRERGDIKGALEYFEKTQNPAQNITQL 971
Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
+ P A + G+Y +++ + + Y ++++ ++
Sbjct: 972 LMENPGAMKRYIQTTSDPKLLKWWGQYIESSGDMDAALAVYHKAEDWFSQVKILCYLGKI 1031
Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQL---AAKEVEIGRYY 200
D Q + +++R E N + + + +
Sbjct: 1032 SKADAIARQSGDRAACYHLARHYENVGKFQEAIMFFTRAQTFSNAIRICKENDFQEELWT 1091
Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE--VVSLIQER-Y 257
+ + +HA E R + AL + E+++ ++ +I
Sbjct: 1092 VASSSRQRDKAIAAAYFEECGNFKHAVELYHRAGMLHKALEMAFESQQPEILEIIASDLA 1151
Query: 258 PQGY 261
P
Sbjct: 1152 PDSD 1155
>gi|149369467|ref|ZP_01889319.1| transcriptional regulator [unidentified eubacterium SCB49]
gi|149356894|gb|EDM45449.1| transcriptional regulator [unidentified eubacterium SCB49]
Length = 571
Score = 35.5 bits (79), Expect = 7.4, Method: Composition-based stats.
Identities = 17/205 (8%), Positives = 53/205 (25%)
Query: 45 DVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQ 104
+ + R +Y ++ +E+N + +Y N+ ++L +
Sbjct: 56 EKAISEKQTEREWEGIYTMGMIHYQERNLKYSIKYENKLLDFINNDDPEAQALKFETYFS 115
Query: 105 YSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSR 164
A + + + MI + + +
Sbjct: 116 VGAFNLHEGTLGRALNYFTKAKDEAKQNDNLNQLQRSYFMINLIQAMSGDFENAINTQKE 175
Query: 165 IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAE 224
++ + + ++ + + + + +D
Sbjct: 176 LLFKIAQTDTNNIKTSQREELYFRVYSSLGDTYLKAKNADSSRHYAAKALNEIKKTNDTC 235
Query: 225 HAEEAMARLVEAYVALALMDEAREV 249
+ A L +AY+ L +A++
Sbjct: 236 RIKYAYRLLSDAYIENKLYAKAKKY 260
>gi|15594555|ref|NP_212344.1| surface-located membrane protein 1 (lmp1) [Borrelia burgdorferi
B31]
gi|13324578|gb|AAK18792.1|AF305600_1 LMP1 [Borrelia burgdorferi]
gi|13324582|gb|AAK18794.1|AF305602_1 LMP1 [Borrelia burgdorferi]
gi|13324586|gb|AAK18796.1|AF305604_1 LMP1 [Borrelia burgdorferi]
gi|13324590|gb|AAK18798.1|AF305606_1 LMP1 [Borrelia burgdorferi]
gi|2688100|gb|AAC66595.1| surface-located membrane protein 1 (lmp1) [Borrelia burgdorferi
B31]
Length = 1119
Score = 35.5 bits (79), Expect = 7.4, Method: Composition-based stats.
Identities = 23/219 (10%), Positives = 60/219 (27%)
Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
+ + Y + Q + Y+ ++ K + + + E F+Q + P A + ++
Sbjct: 760 KAENAYEKIIKLTNTQEDHYKLGIIRFKLKKYEHSIESFDQTIKLDPKHKKALHNKGIAL 819
Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
+ K ++ + Y + + Q K
Sbjct: 820 MMLNKNKKAIESFEKAIQIDKNYGTAYYQKGIAEEKNGDMQQAFASFKNAYNLDKNPNYA 879
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
+ + + + + N E+ I + + E + +
Sbjct: 880 LKAGIVSNNLGNFKQSEEYLNFFNANAKKPNEIAIYNLSIAKFENNKLEESLETINKAID 939
Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
E + + A + SL+ E+ P+
Sbjct: 940 LNPEKSEYLYLKASINLKKENYQNAISLYSLVIEKNPEN 978
>gi|251778611|ref|ZP_04821531.1| putative lipoprotein [Clostridium botulinum E1 str. 'BoNT E
Beluga']
gi|243082926|gb|EES48816.1| putative lipoprotein [Clostridium botulinum E1 str. 'BoNT E
Beluga']
Length = 356
Score = 35.5 bits (79), Expect = 7.5, Method: Composition-based stats.
Identities = 20/205 (9%), Positives = 63/205 (30%), Gaps = 1/205 (0%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K L I + + +G + S + +D + +K ++ ++ +NF +A +
Sbjct: 1 MKKMTLIIMSMMVIFISIGCSNKISNNENIDLYDSKKAIETA-QKYLMEIQNENFEEAKK 59
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+ + S + + S + + L + + N Y +
Sbjct: 60 FCTKDFASASKINDLGNSKIQVFKINKSVDGGDKVSILFDVLRGEDYSPNNNLDKYNIDV 119
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
+ + + + + + + + S K + + + + + R
Sbjct: 120 IKENDEYKINNLSAAENVEVYEKENELRLQTSGSGESKLILKLLDMPKQVYNKGDNPLER 179
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDA 223
+ ++ + + YS
Sbjct: 180 VDIPIDKFSSCGLSYSGDKVAYSTT 204
>gi|117306667|gb|AAI26581.1| DnaJ (Hsp40) homolog, subfamily C, member 3 [Bos taurus]
Length = 504
Score = 35.5 bits (79), Expect = 7.5, Method: Composition-based stats.
Identities = 23/258 (8%), Positives = 67/258 (25%), Gaps = 20/258 (7%)
Query: 34 FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93
L ++ + + + +A+ + +F+ A + ++ +
Sbjct: 131 VLKSNPSENEEKEAQSQLVKSDEMQRLRSQALDAFESSDFTAAITFLDKILEVCVWDAEL 190
Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153
R+ + K + E+ Y + + +V +
Sbjct: 191 RELRAECFIKEGEPRKAISDLKASSKLKNDNTEAFYKISTLYYELGDHELSLSEVRECLK 250
Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK----------- 202
+ + + + + ++ A + GR A + E
Sbjct: 251 LDQDHKRCFAHYKQVKKLNKLIESAEELIKEGRYTDAISKYESVMKTEPGVHEYTIRSKE 310
Query: 203 -----RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA-REVVSLIQER 256
+ + ++ A+ EAY+ + DEA ++ + +
Sbjct: 311 RICHCFSKDEKPVEAIRVCSEVLQVEPDNVNALKDRAEAYLIEEMYDEAIQDYETAQEHN 370
Query: 257 YPQGYWA---RYVETLVK 271
+ L+K
Sbjct: 371 ENDQQIREGLEKAQRLLK 388
>gi|113970701|ref|YP_734494.1| hypothetical protein Shewmr4_2366 [Shewanella sp. MR-4]
gi|114047930|ref|YP_738480.1| hypothetical protein Shewmr7_2438 [Shewanella sp. MR-7]
gi|113885385|gb|ABI39437.1| conserved hypothetical protein [Shewanella sp. MR-4]
gi|113889372|gb|ABI43423.1| conserved hypothetical protein [Shewanella sp. MR-7]
Length = 250
Score = 35.5 bits (79), Expect = 7.5, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 33/79 (41%), Gaps = 2/79 (2%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
LK +Y AIP F+ + Y D+ +A A L + + EA++ +
Sbjct: 131 YESAVNLVLKERKYDDAIPAFRAFIKQYPDSVYAANANYWLGQLLFNKSEFAEAKQAFNT 190
Query: 253 IQERYPQGYWARYVETLVK 271
+ R+ + ++LVK
Sbjct: 191 VVTRFSDSN--KRGDSLVK 207
>gi|15594660|ref|NP_212449.1| hypothetical protein BB0315 [Borrelia burgdorferi B31]
gi|195941331|ref|ZP_03086713.1| hypothetical protein Bbur8_00415 [Borrelia burgdorferi 80a]
gi|218249786|ref|YP_002374837.1| hypothetical protein BbuZS7_0320 [Borrelia burgdorferi ZS7]
gi|221217696|ref|ZP_03589164.1| conserved hypothetical protein [Borrelia burgdorferi 72a]
gi|224533207|ref|ZP_03673807.1| conserved hypothetical protein [Borrelia burgdorferi WI91-23]
gi|224533773|ref|ZP_03674361.1| conserved hypothetical protein [Borrelia burgdorferi CA-11.2a]
gi|225550163|ref|ZP_03771123.1| conserved hypothetical protein [Borrelia burgdorferi 118a]
gi|226320616|ref|ZP_03796176.1| conserved hypothetical protein [Borrelia burgdorferi 29805]
gi|226321632|ref|ZP_03797158.1| conserved hypothetical protein [Borrelia burgdorferi Bol26]
gi|2688223|gb|AAC66704.1| predicted coding region BB0315 [Borrelia burgdorferi B31]
gi|218164974|gb|ACK75035.1| conserved hypothetical protein [Borrelia burgdorferi ZS7]
gi|221192373|gb|EEE18592.1| conserved hypothetical protein [Borrelia burgdorferi 72a]
gi|224511934|gb|EEF82335.1| conserved hypothetical protein [Borrelia burgdorferi WI91-23]
gi|224513066|gb|EEF83429.1| conserved hypothetical protein [Borrelia burgdorferi CA-11.2a]
gi|225369275|gb|EEG98728.1| conserved hypothetical protein [Borrelia burgdorferi 118a]
gi|226232821|gb|EEH31574.1| conserved hypothetical protein [Borrelia burgdorferi Bol26]
gi|226234035|gb|EEH32756.1| conserved hypothetical protein [Borrelia burgdorferi 29805]
gi|312148142|gb|ADQ30801.1| conserved hypothetical protein [Borrelia burgdorferi JD1]
gi|312149570|gb|ADQ29641.1| conserved hypothetical protein [Borrelia burgdorferi N40]
Length = 228
Score = 35.5 bits (79), Expect = 7.5, Method: Composition-based stats.
Identities = 16/168 (9%), Positives = 45/168 (26%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
+TI + ++ + L+ + ++Y+K++L + ++KA E
Sbjct: 1 MRKITIMILFYGLIINVCPTTTTSILKLNKKANKHTIEKLYQKSMLLKDSKKYNKAIESL 60
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
+ A L ++ + K + + I + +D + +
Sbjct: 61 TKIINMDQNQADAHLLLSELEYLNKNWKKAIIKSQDYLKIIDFKDKKNFLDISWAYFLIG 120
Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQ 188
+ D + L + +
Sbjct: 121 EVKNSMDYIIKFFQSGKELFRENIFIAIDALFKKSIYHFTNNENAAFN 168
>gi|298207293|ref|YP_003715472.1| hypothetical protein CA2559_03540 [Croceibacter atlanticus
HTCC2559]
gi|83849929|gb|EAP87797.1| hypothetical protein CA2559_03540 [Croceibacter atlanticus
HTCC2559]
Length = 432
Score = 35.5 bits (79), Expect = 7.5, Method: Composition-based stats.
Identities = 22/220 (10%), Positives = 58/220 (26%), Gaps = 3/220 (1%)
Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
D +E + +A+ +N+ +A + +C P V L +
Sbjct: 8 QQDINVDDLGNVSNTFKEQFFEALKQKGIENYDRAIQALQRCLAQEPKNAVIHFELGKNY 67
Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
+++ Y + Y + + V + +
Sbjct: 68 NALKQYDAAEESLKEALVYRKDDEDILKELYDVQFSKQDFQAAVTTVKQLISYNIIYKED 127
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
++++ +R + + ++ Y + A R + +
Sbjct: 128 LAKLYQRTKEFDKAIEQLDEIDNAQGSSIYRDNLRRVIYNQTNNKEAQANRLEQQIKAAP 187
Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
L+ Y +A D+A + + +P
Sbjct: 188 GNIQN---YLNLIYVYSEMAANDKAFSTAQRLLKAHPDAE 224
>gi|113476308|ref|YP_722369.1| glycosyl transferase family protein [Trichodesmium erythraeum
IMS101]
gi|110167356|gb|ABG51896.1| glycosyl transferase, family 2 [Trichodesmium erythraeum IMS101]
Length = 1486
Score = 35.5 bits (79), Expect = 7.5, Method: Composition-based stats.
Identities = 33/200 (16%), Positives = 63/200 (31%), Gaps = 8/200 (4%)
Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
++KA +L E+ F +A + A K+L + Q + +
Sbjct: 6 PQETAAENFHKKAEAYLAEKKFDEAIASCELAIKIEDNYFPAYKTLGNTWQAQGKLAEAE 65
Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL---MLQYMSRIVER 168
E + +PE Y + + + I + M ++
Sbjct: 66 NWYKKALEIKSNWPEIYANLGSLYAMQQKWEEAISYYQKAVDIKPDFAGAYRNMRKVWLS 125
Query: 169 YTNSPYVKGARFYVTVGRNQLAAK--EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
N ++ V + A + +G+ K G AI +++ S++
Sbjct: 126 LGNQKLATYCQYKVLSIEPEKATFEEFMNVGKTLEKEGSLNDAISCYRMATKLNSNSS-- 183
Query: 227 EEAMARLVEAYVALALMDEA 246
EA L EA +DEA
Sbjct: 184 -EAYQNLGEALKEQGNLDEA 202
>gi|330445543|ref|ZP_08309195.1| tol-pal system protein YbgF [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328489734|dbj|GAA03692.1| tol-pal system protein YbgF [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 240
Score = 35.5 bits (79), Expect = 7.5, Method: Composition-based stats.
Identities = 16/191 (8%), Positives = 46/191 (24%), Gaps = 2/191 (1%)
Query: 82 QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSY 141
Q ++ + V+ ++ ++ E +
Sbjct: 46 QLQMQRRLEQMSSDIDELRGNVERNSYDIKKIVERQREIYREVDNLSRQPEKAAPAEEKK 105
Query: 142 AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAK--EVEIGRY 199
+ + + ++ + + A K
Sbjct: 106 EPASTEAYSSNVSENAAYEKAVNLILKDKDYKGATKAFQSFLTTYPDSVYKPNASYWLGQ 165
Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
+A V+A+ D+ +A+ +L + A+ + + YP
Sbjct: 166 LFFAQNQLADAATNFKVVADTKDSSKRADALLKLGVIAERSNDVATAKTYYQEVVKSYPN 225
Query: 260 GYWARYVETLV 270
A+ +T +
Sbjct: 226 STTAQQAKTAL 236
>gi|224121752|ref|XP_002330644.1| predicted protein [Populus trichocarpa]
gi|222872248|gb|EEF09379.1| predicted protein [Populus trichocarpa]
Length = 686
Score = 35.5 bits (79), Expect = 7.5, Method: Composition-based stats.
Identities = 21/204 (10%), Positives = 59/204 (28%), Gaps = 9/204 (4%)
Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK-----SLLMSAFVQYSAGKYQQAASLGE 118
A +L + +KA +F + + AR L + + +
Sbjct: 431 AQCYLSLNDRAKAIMFFYKALPMLKDSIDARVALASLILEDAKEDEAISLLSPPKDLDSL 490
Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
+ + +D L + + +++ + + ++
Sbjct: 491 DSNSYMQNPWWLDGKIKLKLCHIYKAKGMLEDFVNTISPLVRESLYVKTLRPKTESLQSK 550
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
R + + + + ++ + N E+++EA+ + AY
Sbjct: 551 REEQKAADKAAGTALINLTLGFRLQNKHQCLAQGLAFLYNNLQLTENSQEALYNIARAYH 610
Query: 239 ALALMDEAREVVSLI----QERYP 258
+ L+ A + ++ YP
Sbjct: 611 HVGLVSLAASYYEKVLAACEKDYP 634
>gi|167623624|ref|YP_001673918.1| Tol-Pal system YbgF [Shewanella halifaxensis HAW-EB4]
gi|167353646|gb|ABZ76259.1| Tol-Pal system YbgF [Shewanella halifaxensis HAW-EB4]
Length = 241
Score = 35.5 bits (79), Expect = 7.5, Method: Composition-based stats.
Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 202 KRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
K +Y AAIP F + +Y ++ +A A L + + A + + + E+Y
Sbjct: 133 KDKKYEAAIPAFAQFIESYPNSSYAPNANYWLGQLLYNKSEFVGASKAFTTVVEKYKDSG 192
Query: 262 WARYVETLVK 271
+ E+LVK
Sbjct: 193 --KRGESLVK 200
>gi|119628677|gb|EAX08272.1| intraflagellar transport 88 homolog (Chlamydomonas), isoform CRA_g
[Homo sapiens]
gi|194374639|dbj|BAG62434.1| unnamed protein product [Homo sapiens]
Length = 805
Score = 35.5 bits (79), Expect = 7.5, Method: Composition-based stats.
Identities = 21/193 (10%), Positives = 54/193 (27%), Gaps = 7/193 (3%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
KAV +L+++++++A E + A + L + + + +
Sbjct: 401 NKAVTYLRQKDYNQAVEILKVLEKKDNRVKSAAATNLSALYYMGKDFAQASSYADIAVNS 460
Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVP----YDQRATKLMLQYMSRIVERYTNSPYVKG 177
+Y + + + + + + + L + E+
Sbjct: 461 DRYNPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNRLDEALD 520
Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
+ A +I Y AI V++ +++L E Y
Sbjct: 521 CFLKLHAILRNSAEVLYQIANIYELMENPSQAIEWLMQVVSVIPTDPQV---LSKLGELY 577
Query: 238 VALALMDEAREVV 250
+A +
Sbjct: 578 DREGDKSQAFQYY 590
>gi|114685618|ref|XP_001172489.1| PREDICTED: tetratricopeptide repeat protein 28 [Pan troglodytes]
Length = 2481
Score = 35.5 bits (79), Expect = 7.5, Method: Composition-based stats.
Identities = 25/203 (12%), Positives = 56/203 (27%), Gaps = 12/203 (5%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
S ++ RE+ +++ +F A + Q + + K A+ +
Sbjct: 347 SKDELSEARELGNMGAVYIAMGDFENAVQCHEQHLKIAK--DLGNKREEARAYSNLGSAY 404
Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
+ + Y + + + M + + + QY + +
Sbjct: 405 HYRRNFDKAMSYHNYVLELAQELMEKAIEMRAYAGLGHAARCMQDLERAKQYHEQQLGIA 464
Query: 170 TN-SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
+ R +G + + K +A SD
Sbjct: 465 EDLKDRAAEGRASSNLGIIHQMKGDYDTALKLHKTHLCIAQEL---------SDYAAQGR 515
Query: 229 AMARLVEAYVALALMDEAREVVS 251
A + AY AL + D+A +
Sbjct: 516 AYGNMGNAYNALGMYDQAVKYHR 538
>gi|113475981|ref|YP_722042.1| hypothetical protein Tery_2349 [Trichodesmium erythraeum IMS101]
gi|110167029|gb|ABG51569.1| TPR repeat [Trichodesmium erythraeum IMS101]
Length = 649
Score = 35.5 bits (79), Expect = 7.5, Method: Composition-based stats.
Identities = 31/211 (14%), Positives = 59/211 (27%), Gaps = 7/211 (3%)
Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
+ +Y + +++ K+ + A NQ + P A K+ + Q
Sbjct: 320 NPKYADAYNNRGIVYRKQGKYDLALADLNQAIQLNPKYADAYKNRGNVYYNQGKYDLALA 379
Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL---MLQYMSRIVERY 169
+ + +Y E+ N + Y Y I + + + +
Sbjct: 380 DYNQAIQLNPKYAEAYNNRGLVYDDQGKYDLAIAEFNQAIQLNPKYAYAYNNRGVVYDDQ 439
Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
+ A G YL++G+Y AI + + EA
Sbjct: 440 GKYDLALADYNQAIQLNPKYAEAYNNRGGVYLEQGKYDLAIADYNQAIQLNPK---LAEA 496
Query: 230 MARLVEAYVALALMDEA-REVVSLIQERYPQ 259
Y D A + I+ PQ
Sbjct: 497 YNNRGAVYRKQGKYDLALADYNESIRLNNPQ 527
>gi|255593609|ref|XP_002535911.1| Cobalt-zinc-cadmium resistance protein czcB, putative [Ricinus
communis]
gi|223521556|gb|EEF26471.1| Cobalt-zinc-cadmium resistance protein czcB, putative [Ricinus
communis]
Length = 357
Score = 35.5 bits (79), Expect = 7.6, Method: Composition-based stats.
Identities = 15/158 (9%), Positives = 49/158 (31%)
Query: 15 WAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFS 74
+ LY AL + I L G ++++ + T + ++ ++ L
Sbjct: 4 FFRNLYVIALALSVIIFFVLLSGCSSKNNQPQESKTETSSTPAKTKADEDLIKLSPAEIQ 63
Query: 75 KAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVY 134
++ + ++ ++ + +++ + + + L + K +
Sbjct: 64 QSGVTIAKVAKQPIQDQLSFTANILANQNKLAHVTPRIEGKLSKVIANLGDHVKTGQTLA 123
Query: 135 YLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
+ + + + L RI + Y +
Sbjct: 124 EIDSVPMGEARAQFRSSKTDLTLAQANFDRISKLYEDK 161
>gi|75909668|ref|YP_323964.1| hypothetical protein Ava_3462 [Anabaena variabilis ATCC 29413]
gi|75703393|gb|ABA23069.1| TPR repeat protein [Anabaena variabilis ATCC 29413]
Length = 791
Score = 35.5 bits (79), Expect = 7.6, Method: Composition-based stats.
Identities = 16/178 (8%), Positives = 40/178 (22%), Gaps = 8/178 (4%)
Query: 74 SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
+A + F Q R + S + + Y KN + +
Sbjct: 598 EEAAKLFQQVIYLAQNTDHHRWAEKASVCLALVNSYLGLYDAAYLLADVAYQNIKNEEIL 657
Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
+ Q++ + + + + S Y++ + +
Sbjct: 658 ETGRFAYFMQILGQTYVNLGEFTKAKEMFHQALTFAEESHYMQVKAKTLNGLAEIHRQQA 717
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
E +L Y +A D +++ +
Sbjct: 718 DYPLALAYHTEAIELLEKIGAKCD--------LAETYFQLGLTYQKMAKSDASQKYFA 767
>gi|332217852|ref|XP_003258077.1| PREDICTED: LOW QUALITY PROTEIN: tetratricopeptide repeat protein
28-like [Nomascus leucogenys]
Length = 2480
Score = 35.5 bits (79), Expect = 7.7, Method: Composition-based stats.
Identities = 25/203 (12%), Positives = 56/203 (27%), Gaps = 12/203 (5%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
S ++ RE+ +++ +F A + Q + + K A+ +
Sbjct: 347 SKDELSEARELGNMGAVYIAMGDFENAVQCHEQHLKIAK--DLGNKREEARAYSNLGSAY 404
Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
+ + Y + + + M + + + QY + +
Sbjct: 405 HYRRNFDKAMSYHNYVLELAQELMEKAIEMRAYAGLGHAARCMQDLERAKQYHEQQLGIA 464
Query: 170 TN-SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
+ R +G + + K +A SD
Sbjct: 465 EDLKDRAAEGRASSNLGIIHQMKGDYDTALKLHKTHLCIAQEL---------SDYAAQGR 515
Query: 229 AMARLVEAYVALALMDEAREVVS 251
A + AY AL + D+A +
Sbjct: 516 AYGNMGNAYNALGMYDQAVKYHR 538
>gi|295134310|ref|YP_003584986.1| gluconolactonase precursor [Zunongwangia profunda SM-A87]
gi|294982325|gb|ADF52790.1| possible gluconolactonase precursor [Zunongwangia profunda SM-A87]
Length = 303
Score = 35.5 bits (79), Expect = 7.7, Method: Composition-based stats.
Identities = 15/192 (7%), Positives = 38/192 (19%), Gaps = 15/192 (7%)
Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
++ K+ L + V E+ +S ++ ++ + KE N
Sbjct: 2 KMKKYLLILSVCSLHLLTVSCEKHTSPVKDGAKP-ELISDEFIFTEGPASDKEGNVYFTD 60
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
+ NQ + + + + Q +
Sbjct: 61 QPNNQILKWDAKSNSISVYMKDAGRSNGMYFDDDQNLWTCAD--------------ENFQ 106
Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
+ + + Y + + E
Sbjct: 107 LWKISPDKEVSVVLDGHENKAFNGPNDLWMDEKGGFYFTDPYYQREYWERKSPEMEKRKV 166
Query: 198 RYYLKRGEYVAA 209
Y + V
Sbjct: 167 YYLSPDHKTVTP 178
>gi|237748200|ref|ZP_04578680.1| Sel1 repeat-containing protein [Oxalobacter formigenes OXCC13]
gi|229379562|gb|EEO29653.1| Sel1 repeat-containing protein [Oxalobacter formigenes OXCC13]
Length = 317
Score = 35.5 bits (79), Expect = 7.7, Method: Composition-based stats.
Identities = 18/178 (10%), Positives = 48/178 (26%)
Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
Q+ K +L + + + + + + + YQ Y+KA+ LK+ S +
Sbjct: 16 QMKKQSLFLIIIAMILTISACTEKEYKYLADEKAGIEYYQNGSYDKALASLKKAYGSGSM 75
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
E + K ++S + + + P++++ +
Sbjct: 76 EAAYYLGEMYRQGNGVEKDRIVSCNYYQKSAEGGNRKAFLRAGTCHIPDTRDGEGFKETF 135
Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
D + Y+ + Y ++ +
Sbjct: 136 KWFKKASEELKETDLNEAEKKDMYIRLGIMYYAGKGTLQDWSEAAKWFEKAAEMGDAY 193
>gi|206889791|ref|YP_002249691.1| tetratricopeptide repeat domain protein [Thermodesulfovibrio
yellowstonii DSM 11347]
gi|206741729|gb|ACI20786.1| tetratricopeptide repeat domain protein [Thermodesulfovibrio
yellowstonii DSM 11347]
Length = 758
Score = 35.5 bits (79), Expect = 7.7, Method: Composition-based stats.
Identities = 14/175 (8%), Positives = 46/175 (26%), Gaps = 5/175 (2%)
Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
++ F++ + + S S + ++
Sbjct: 571 EIRDNNIYDNNLNIYSETFLKIAPNYFGSINSDEMRLRNIQISSVYDAKLPEGKLVNPIT 630
Query: 144 MIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI-GRYYLK 202
+ + +++ E + Y K + + Q + Y +
Sbjct: 631 NPYAKLSQEERQRKATEFVIEAGEYFRQRNYGKAVTLFEEALKAQPTPEIYYYLAICYQE 690
Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV-SLIQER 256
E + + + + ++++ Y DEA++V +++
Sbjct: 691 MKEEEKTLKYLREGVEKFPKDSTLQKSL---GLIYYQAGREDEAKKVFEEVLRLN 742
>gi|94969216|ref|YP_591264.1| hypothetical protein Acid345_2189 [Candidatus Koribacter versatilis
Ellin345]
gi|94551266|gb|ABF41190.1| hypothetical protein Acid345_2189 [Candidatus Koribacter versatilis
Ellin345]
Length = 216
Score = 35.5 bits (79), Expect = 7.7, Method: Composition-based stats.
Identities = 7/57 (12%), Positives = 21/57 (36%)
Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARK 95
+ ++ + + E Y+ A+ + ++ A E+F++ + P
Sbjct: 94 STCKQQMSRTENASKFKTPEEHYDFAISLVNMGDYITAREHFDKLLKTHPTKDFIWY 150
>gi|224028289|ref|NP_001138890.1| tetratricopeptide repeat protein 28 [Homo sapiens]
gi|218512146|sp|Q96AY4|TTC28_HUMAN RecName: Full=Tetratricopeptide repeat protein 28; Short=TPR repeat
protein 28
gi|55660890|emb|CAH73824.1| tetratricopeptide repeat domain 28 [Homo sapiens]
gi|55957129|emb|CAI17993.1| tetratricopeptide repeat domain 28 [Homo sapiens]
gi|56202627|emb|CAI17985.1| tetratricopeptide repeat domain 28 [Homo sapiens]
gi|56202693|emb|CAI21502.1| tetratricopeptide repeat domain 28 [Homo sapiens]
gi|56202776|emb|CAI18818.1| tetratricopeptide repeat domain 28 [Homo sapiens]
gi|56202802|emb|CAI18760.1| tetratricopeptide repeat domain 28 [Homo sapiens]
Length = 2481
Score = 35.5 bits (79), Expect = 7.7, Method: Composition-based stats.
Identities = 25/203 (12%), Positives = 56/203 (27%), Gaps = 12/203 (5%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
S ++ RE+ +++ +F A + Q + + K A+ +
Sbjct: 347 SKDELSEARELGNMGAVYIAMGDFENAVQCHEQHLKIAK--DLGNKREEARAYSNLGSAY 404
Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
+ + Y + + + M + + + QY + +
Sbjct: 405 HYRRNFDKAMSYHNYVLELAQELMEKAIEMRAYAGLGHAARCMQDLERAKQYHEQQLGIA 464
Query: 170 TN-SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
+ R +G + + K +A SD
Sbjct: 465 EDLKDRAAEGRASSNLGIIHQMKGDYDTALKLHKTHLCIAQEL---------SDYAAQGR 515
Query: 229 AMARLVEAYVALALMDEAREVVS 251
A + AY AL + D+A +
Sbjct: 516 AYGNMGNAYNALGMYDQAVKYHR 538
>gi|59711571|ref|YP_204347.1| hypothetical protein VF_0964 [Vibrio fischeri ES114]
gi|59479672|gb|AAW85459.1| predicted protein [Vibrio fischeri ES114]
Length = 252
Score = 35.5 bits (79), Expect = 7.7, Method: Composition-based stats.
Identities = 20/123 (16%), Positives = 34/123 (27%), Gaps = 3/123 (2%)
Query: 149 PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVA 208
+ + + I A A LK Y
Sbjct: 92 DQMLERQRQLYIEIDNIRTAKPTVEAKPEATEGAYAADTNENAAYQNAVDLILKEKNYAG 151
Query: 209 AIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
A FQ + Y D+ ++ A L + Y A EA + + + Y + +
Sbjct: 152 ATKAFQEFVTAYPDSVYSSNAHYWLGQLYFAQKNDVEAAKSFAKVVS-YADSN--KRADA 208
Query: 269 LVK 271
L+K
Sbjct: 209 LLK 211
>gi|53712987|ref|YP_098979.1| putative cell surface antigen [Bacteroides fragilis YCH46]
gi|52215852|dbj|BAD48445.1| putative cell surface antigen [Bacteroides fragilis YCH46]
Length = 520
Score = 35.5 bits (79), Expect = 7.7, Method: Composition-based stats.
Identities = 8/54 (14%), Positives = 18/54 (33%), Gaps = 4/54 (7%)
Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRD----VYLDSVTDVRYQREVYEKAVLF 67
+ +F F +++CFL + S + + D + +Y
Sbjct: 2 KQKQFYFIYVFLLSMCFLGACSKDSPNELIPNTIVKIEIDELPGKRIYFIGEEL 55
>gi|317153056|ref|YP_004121104.1| response regulator receiver [Desulfovibrio aespoeensis Aspo-2]
gi|316943307|gb|ADU62358.1| response regulator receiver [Desulfovibrio aespoeensis Aspo-2]
Length = 370
Score = 35.5 bits (79), Expect = 7.7, Method: Composition-based stats.
Identities = 18/200 (9%), Positives = 48/200 (24%), Gaps = 24/200 (12%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
++A ++ +F +A E F + A +
Sbjct: 146 QEARDMVERGDFDEAIEAFEELISYQDEAQKYYDMGCQFMLQCKYGKAIVAFKKAVKIND 205
Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
K + Y G ++ + + +
Sbjct: 206 LFAEAYKGLADAYKGKGD-------------------MEAYKLFLRKAADIHAQFDRLEA 246
Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD----AEHAEEAMARLVEAY 237
++ + E + G + + L Y E + +A+
Sbjct: 247 TKALFIEILKHDAETPNPFNTLGVNLRKQGDYPGALHAYRRALELTPSDENIYFNMAKAF 306
Query: 238 VALALMDEA-REVVSLIQER 256
+ ++EA + V+ ++
Sbjct: 307 YFMEKVEEASKNVIMALKMN 326
>gi|226312092|ref|YP_002771986.1| hypothetical protein BBR47_25050 [Brevibacillus brevis NBRC 100599]
gi|226095040|dbj|BAH43482.1| hypothetical protein [Brevibacillus brevis NBRC 100599]
Length = 469
Score = 35.5 bits (79), Expect = 7.7, Method: Composition-based stats.
Identities = 22/215 (10%), Positives = 50/215 (23%), Gaps = 25/215 (11%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
+ Y A+ +L++ + A E ++ ++ ++
Sbjct: 195 EIKPEQEEAKYNLALCYLRDGD---AQEALDELEPYLEKNEHDWEAQMLWLRAAKLLHMM 251
Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
+ Q P + Y + + ER
Sbjct: 252 DKTVEWSPPKGLQLPTRDLDSDTLQEMASLYETVGNYH--------RAQICYHFLTERSP 303
Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
+ + T + + E + + +L E A +A
Sbjct: 304 KDGWTWHGLAWNTWLIAGTKRALTLVKKAISLAPENDDFLFSYGWMLLFDGRVEEAIKAF 363
Query: 231 ARLVE--------------AYVALALMDEAREVVS 251
++E AY L EA+ +
Sbjct: 364 RIMLEKNRDNRLGQSGMISAYEKLGDTQEAKRMAK 398
>gi|224540058|ref|ZP_03680597.1| hypothetical protein BACCELL_04971 [Bacteroides cellulosilyticus
DSM 14838]
gi|224518322|gb|EEF87427.1| hypothetical protein BACCELL_04971 [Bacteroides cellulosilyticus
DSM 14838]
Length = 667
Score = 35.5 bits (79), Expect = 7.7, Method: Composition-based stats.
Identities = 22/229 (9%), Positives = 53/229 (23%), Gaps = 5/229 (2%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K+ I V +V + + KA F ++ + A
Sbjct: 1 MNKY-FIFPLIILVSGIVSCNKPPGSAHPPAQFHADS--IAILAKANQFRLDKEYDSAIS 57
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV-DYVYYLV 137
+ + L + + + K+
Sbjct: 58 LLDSAFLLPVKSNQHPNGLSPDDARRLMSYAIRHLMFAYNHSRRIAEGHKHFLRLREMNH 117
Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
+ R++ L + + + + + +AA +
Sbjct: 118 PILSNHCQREILVCDAQMLQTLGRRAEACQLLDQAMSINENDDPSSELFCTIAAGITYMA 177
Query: 198 RYYLKRGEYVAAIPRFQLVLAN-YSDAEHAEEAMARLVEAYVALALMDE 245
+ A + + + Y D +AMA L Y+ +
Sbjct: 178 VDSTETRAEPALLRAAEAMRNGAYDDTGLYPQAMANLANIYIRKNEFQK 226
>gi|332885676|gb|EGK05922.1| hypothetical protein HMPREF9456_02186 [Dysgonomonas mossii DSM
22836]
Length = 267
Score = 35.5 bits (79), Expect = 7.8, Method: Composition-based stats.
Identities = 13/113 (11%), Positives = 30/113 (26%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K I I++ L + + D V V +A + ++ + E
Sbjct: 1 MKKINGLITICISLLLLTSCGNKKNNDPNHIKVGVSSGPEYVIAEAAKKVAKEKYGLEVE 60
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD 131
P + + + + F + Q + I +
Sbjct: 61 LVQFSDYVMPNTALDQGDIEANVFQTKPFLEEQTTNRGYKFAIVGNTFVYPMA 113
>gi|313204167|ref|YP_004042824.1| tpr domaiN-containing protein [Paludibacter propionicigenes WB4]
gi|312443483|gb|ADQ79839.1| TPR domain-containing protein [Paludibacter propionicigenes WB4]
Length = 1157
Score = 35.5 bits (79), Expect = 7.8, Method: Composition-based stats.
Identities = 7/64 (10%), Positives = 22/64 (34%)
Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
K + +I F+ + + +A + + + D+A + + +P
Sbjct: 595 DKIEDVPMSIATFEEFCRRFGSDKRVADAYFNIYQIQLKSGNQDQANVYRTKLITDFPDS 654
Query: 261 YWAR 264
+ +
Sbjct: 655 KYQK 658
>gi|118780595|ref|XP_310258.5| AGAP003727-PA [Anopheles gambiae str. PEST]
gi|116130924|gb|EAA05979.3| AGAP003727-PA [Anopheles gambiae str. PEST]
Length = 951
Score = 35.5 bits (79), Expect = 7.8, Method: Composition-based stats.
Identities = 13/91 (14%), Positives = 31/91 (34%), Gaps = 4/91 (4%)
Query: 175 VKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA----EHAEEAM 230
A K ++ +Y R + +++ + + + + +A+
Sbjct: 30 CWEAAIKWYTKAIHAGEKHKDLPVFYKNRAAAYLKLEQYEEAHKDCTQSLEICPNDPKAL 89
Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQGY 261
R +A+ AL +EA + + I P
Sbjct: 90 FRRFQAFEALERFEEAYKDLRTIHTNDPNNK 120
>gi|91200490|emb|CAJ73538.1| similar to N-acetylglucosaminyltransferases (O-GlcNAc transferase)
[Candidatus Kuenenia stuttgartiensis]
Length = 568
Score = 35.5 bits (79), Expect = 7.8, Method: Composition-based stats.
Identities = 29/214 (13%), Positives = 62/214 (28%), Gaps = 9/214 (4%)
Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
Y A+L+L+ +++++Y N+ + S+ ++ + + K
Sbjct: 157 AEAYYTMALLYLETNKINESFDYLNKAIKLDSNNPDFHFSMGLAFYKKNMPEKALTEFQK 216
Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD---QRATKLMLQYMSRIVERYTNSP 173
+ + E+ N + Y + I + + + + N
Sbjct: 217 TLDLNPRDAEAHNYLGIIYYEMNEIEKAISAHQTAVKLKNNYTDAYNNLGIALFAHNNLN 276
Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
K A R A +G K G AI + +A + A +L
Sbjct: 277 EAKDAFETALKLRADFAEAHYNLGLILSKEGNSKEAIASLEKAIAI---SNAIAPAHFKL 333
Query: 234 VEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
E Y + + D+A +
Sbjct: 334 GEIYTKINMPDKALSAYE---SAFSDDPSYEEAY 364
>gi|186684583|ref|YP_001867779.1| signal transduction protein [Nostoc punctiforme PCC 73102]
gi|186467035|gb|ACC82836.1| putative signal transduction protein with Nacht domain protein
[Nostoc punctiforme PCC 73102]
Length = 1815
Score = 35.5 bits (79), Expect = 7.8, Method: Composition-based stats.
Identities = 17/195 (8%), Positives = 44/195 (22%), Gaps = 10/195 (5%)
Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
++ + + +A YF Q + G + + ++ +
Sbjct: 1405 ASAYFQLGSIHQAWGKYEQAIAYFQQSYDLYEQLGKEKDVANLWYWLADCYSNW--GKYE 1462
Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
Q + + + + + Y + + Y K
Sbjct: 1463 QALECQQQCLIIRQTLNDTSLIAVTYHQLGRIYQTWGKYEKAITYFQQSRDLYEQLGQDK 1522
Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
+ K + V ++ L+ + + A L
Sbjct: 1523 NVANQWDWLA--------YCYLNWGKYEQAVEYQKQYLLLHQSLDNQPEIANAYYWLGRI 1574
Query: 237 YVALALMDEAREVVS 251
Y ++A E
Sbjct: 1575 YRVWDKYEQALEYFQ 1589
>gi|326428532|gb|EGD74102.1| kinesin light chain isoform 1 [Salpingoeca sp. ATCC 50818]
Length = 431
Score = 35.5 bits (79), Expect = 7.9, Method: Composition-based stats.
Identities = 12/203 (5%), Positives = 43/203 (21%), Gaps = 6/203 (2%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
+ + + KA ++ + + S + + Y
Sbjct: 4 EKHPSTADSYLGLGNAYYSKGEYDKAIAFYEKALAITVETLGEKHPSTASTYNNLGSAYY 63
Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGM--SYAQMIRDVPYDQRATKLMLQYMSRIVER 168
+ + + V+ + + + + + +
Sbjct: 64 SKGEYDKAIAFYEKALAITVETLGEKHPSTADTYNNLGSTYGSKGDFDKAVVCFEKALAI 123
Query: 169 YTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
+ K + G +A K + E + + +
Sbjct: 124 QAETLGEKHPSTATSYGSLGVAYKHKGEYDRAIAFYE-KDLAITVEALGEKHP---SVAT 179
Query: 229 AMARLVEAYVALALMDEAREVVS 251
+ + Y ++A +
Sbjct: 180 SYFNIGLLYDKRGDKEQACAYIQ 202
>gi|325202424|gb|ADY97878.1| conserved hypothetical protein [Neisseria meningitidis M01-240149]
gi|325207824|gb|ADZ03276.1| conserved hypothetical protein [Neisseria meningitidis NZ-05/33]
Length = 405
Score = 35.5 bits (79), Expect = 7.9, Method: Composition-based stats.
Identities = 40/279 (14%), Positives = 80/279 (28%), Gaps = 11/279 (3%)
Query: 1 MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV 60
+ VLG+ + A+ L + + F++G + S R
Sbjct: 28 VYIVLGQTMLRINLHAFVLGSLIAVVVWYFLFKFIIGVFNIPEKMQRFGSARKGRKAALA 87
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
KA L E F KA ++ + +L++ A + E
Sbjct: 88 LNKAGLAYFEGRFEKAELEASRVLVNKEAGDNRTLALMLGAHAAGQMENIELRDRYLAEI 147
Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
+ + Y+ + + A M ++R+V + +G
Sbjct: 148 AKLPEKQQLSRYLLLAESALNRRDYEAAEANLHAAAKMNANLTRLVRLQLRYAFDRGDAL 207
Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEY--------VAAIPRFQLVLANYSDAEHAEEAMAR 232
V +L+ + + A + L D+ E
Sbjct: 208 QVLAKTEKLSKAGALGKSEMERYQNWAYRRQLADAADAAALKTCLKRIPDSLKNGELSVS 267
Query: 233 LVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+ E Y L L +A + +++ YP +E V+
Sbjct: 268 VAEKYERLGLYADAVKW---VKQHYPHNRRPELLEAFVE 303
>gi|297274066|ref|XP_002800721.1| PREDICTED: intraflagellar transport protein 88 homolog [Macaca
mulatta]
Length = 805
Score = 35.5 bits (79), Expect = 7.9, Method: Composition-based stats.
Identities = 21/193 (10%), Positives = 54/193 (27%), Gaps = 7/193 (3%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
KAV +L+++++++A E + A + L + + + +
Sbjct: 401 NKAVTYLRQKDYNQAVEILKMLEKKDSRVKSAAATNLSALYYMGKDFAQASSYADIAVNS 460
Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVP----YDQRATKLMLQYMSRIVERYTNSPYVKG 177
+Y + + + + + + + L + E+
Sbjct: 461 DRYNPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNRLDEALD 520
Query: 178 ARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY 237
+ A +I Y AI V++ +++L E Y
Sbjct: 521 CFLKLHAILRNSAEVLYQIANIYELMENPSQAIEWLMQVVSVVPTDPQV---LSKLGELY 577
Query: 238 VALALMDEAREVV 250
+A +
Sbjct: 578 DHEGDKSQAFQYY 590
>gi|295092953|emb|CBK82044.1| hypothetical protein [Coprococcus sp. ART55/1]
Length = 536
Score = 35.5 bits (79), Expect = 7.9, Method: Composition-based stats.
Identities = 8/46 (17%), Positives = 18/46 (39%)
Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
D +++ A+ Y+ L+ + A V + + E P +
Sbjct: 383 QDTPNSDVALFYKAMCYLKLSDDNNATLVFNQLVENCPNSVYYTVA 428
>gi|269118691|ref|YP_003306868.1| hypothetical protein Sterm_0049 [Sebaldella termitidis ATCC 33386]
gi|268612569|gb|ACZ06937.1| Tetratricopeptide TPR_2 repeat protein [Sebaldella termitidis ATCC
33386]
Length = 503
Score = 35.5 bits (79), Expect = 7.9, Method: Composition-based stats.
Identities = 26/226 (11%), Positives = 61/226 (26%), Gaps = 5/226 (2%)
Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90
+++ Y D Y +L+ NF A Y+ + +
Sbjct: 135 LAVLYNSSSKKNDAIKYFKMAADKGDIDAAYNLGLLYDDAGNFDSAEYYYKKAADVNNSN 194
Query: 91 GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150
A +L + Q + + + + G
Sbjct: 195 INAMYNLAILYEKQNKINDSLKYYEKTYNRNYDPKILYKLGLLNDISGNYQNAEKYYKQA 254
Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
++A Y ++ N F +N+ IG Y ++ Y A
Sbjct: 255 AEKAGDTDAMYNLGLLYMSQNKYNDAQKYFLQLYSKNKTGKTANLIGNIYERQKNYKLAE 314
Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
+ L + + A+ + Y + ++A++ + + +
Sbjct: 315 QYYNEAL-----SLGEKNAVYNIAMLYQSQENYEQAQKYLENLAQN 355
>gi|325127890|gb|EGC50794.1| hypothetical protein NMXN1568_1359 [Neisseria meningitidis N1568]
Length = 405
Score = 35.5 bits (79), Expect = 7.9, Method: Composition-based stats.
Identities = 40/279 (14%), Positives = 80/279 (28%), Gaps = 11/279 (3%)
Query: 1 MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV 60
+ VLG+ + A+ L + + F++G + S R
Sbjct: 28 VYIVLGQTMLRINLHAFVLGSLIAVVVWYFLFKFIIGVFNIPEKMQRFGSARKGRKAALA 87
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
KA L E F KA ++ + +L++ A + E
Sbjct: 88 LNKAGLAYFEGRFEKAELEASRVLGNKEAGDNRTLALMLGAHAAGQMENIELRDRYLAEI 147
Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
+ + Y+ + + A M ++R+V + +G
Sbjct: 148 AKLPEKQQLSRYLLLAESALNRRDYEAAEANLHAAAKMNANLTRLVRLQLRYAFDRGDAL 207
Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEY--------VAAIPRFQLVLANYSDAEHAEEAMAR 232
V +L+ + + A + L D+ E
Sbjct: 208 QVLAKTEKLSKAGALGKSEMERYQNWAYRRQLADAADAAALKTCLKRIPDSLKNGELSVS 267
Query: 233 LVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+ E Y L L +A + +++ YP +E V+
Sbjct: 268 VAEKYERLGLYADAVKW---VKQHYPHNRRPELLEAFVE 303
>gi|297172348|gb|ADI23324.1| thiol-disulfide isomerase and thioredoxins [uncultured nuHF2
cluster bacterium HF0770_19K18]
Length = 647
Score = 35.5 bits (79), Expect = 7.9, Method: Composition-based stats.
Identities = 32/266 (12%), Positives = 69/266 (25%), Gaps = 15/266 (5%)
Query: 19 LYKFALTIF-FSIAVCFLVGWERQSSRDVYLDSVTDVRYQRE---VYEKAVLFLKEQNFS 74
+ +F F + C ++ +V+ S + + +Y L+ N
Sbjct: 1 MTRFTKIYTWFFLVSCLMMSCSSYDFSNVFSTSPANPQAGEIVTLLYNPKGTILEGTNQI 60
Query: 75 KAY------EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
A + S V ++
Sbjct: 61 FAIVRTYGDRNYQPASMFSMPNNVIDTEEYKMKRKHPGWLVKILVPDSVVGFVVTLHNET 120
Query: 129 NVDYVYYLVGMSY-AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRN 187
+ DY L + + A + + Y + +
Sbjct: 121 DTDYNEGLGYWVPLYTQDQHLLPGAEAGYAASLVRRGWGAKLDKTLYADTLLGFYDKEFS 180
Query: 188 QLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD----AEHAEEAMARLVEAYVALALM 243
+ K+ + Y + F + AN + EE + L Y A+
Sbjct: 181 RNPDKKPDFAFSYFSALKKSKGSDGFVEIEANLQALDNPDQWTEEHLFFLSAWYGAVKNQ 240
Query: 244 DEAREVVSLIQERYPQGYWARYVETL 269
++A + +E++P G W + E +
Sbjct: 241 EKADYYKTKSREKFPTGRWVQREEAI 266
>gi|309800353|ref|ZP_07694520.1| TPR domain protein [Streptococcus infantis SK1302]
gi|308116025|gb|EFO53534.1| TPR domain protein [Streptococcus infantis SK1302]
Length = 365
Score = 35.5 bits (79), Expect = 7.9, Method: Composition-based stats.
Identities = 31/233 (13%), Positives = 69/233 (29%), Gaps = 5/233 (2%)
Query: 39 ERQSSRDVYLDSVTDVRYQRE-VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSL 97
+ S +L+ ++ Y+ + +E A L+ ++ + KA YF Q P
Sbjct: 137 GKFESAIEFLEKALELDYEDQTAFELASLYFDQEEYQKAVLYFKQLDTISPDFEGYEYGY 196
Query: 98 LMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
+ ++ + A G E + Q + Q +
Sbjct: 197 SQALHKEHQTEQALLIAQQGLEKNPFETRLLLLASQLSYELHQPGQAETYLLQAQEDAED 256
Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
+ + R+ Y + G L K + E ++
Sbjct: 257 QEEILLRLATMYQEQERYEDILALEVYGPENLLTKWM----IARSYQETEDLDVAYESYQ 312
Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
A S+ + E + + + L +EA+E + + P + + +
Sbjct: 313 ALVSELKENPEFLEQYIHLLRELGRFEEAKEQIQHYLKLVPDDIQMQDLYERL 365
>gi|291234504|ref|XP_002737189.1| PREDICTED: kinesin light chain-like [Saccoglossus kowalevskii]
Length = 1060
Score = 35.5 bits (79), Expect = 7.9, Method: Composition-based stats.
Identities = 22/219 (10%), Positives = 55/219 (25%), Gaps = 4/219 (1%)
Query: 43 SRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR----DFPFAGVARKSLL 98
+ + TD + ++++ EY + + + +
Sbjct: 629 KQKDVGEDTTDEMIANAYNLIGNSYYSMNKYNESSEYLEKSLQIRREMQGQSSTSIGIAS 688
Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
+ + E + K D + + V +
Sbjct: 689 SLNNLGHVYEALDHFKKAAECHEEALEIRKRYDDEVHEDVAQSLGNLGRVYVSMGEFEKA 748
Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLA 218
++Y + A + N + IG + + A+ +LV
Sbjct: 749 VKYHEEALRVKRKLYRKSSAHPDILSSINIIGRIYANIGEHQKAVNYHHDALVMSKLVHG 808
Query: 219 NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
++ + + L Y +L D+A + Y
Sbjct: 809 ERNNHSDIADCLWNLGNTYHSLRDNDKALDYYQQSLNMY 847
>gi|149730451|ref|XP_001492322.1| PREDICTED: DnaJ (Hsp40) homolog, subfamily C, member 3 [Equus
caballus]
Length = 525
Score = 35.5 bits (79), Expect = 7.9, Method: Composition-based stats.
Identities = 24/258 (9%), Positives = 69/258 (26%), Gaps = 20/258 (7%)
Query: 34 FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93
L ++ + + + +A+ + +++ A + ++ +
Sbjct: 152 VLKSNPSENEEKEAQAQLIKSDEMQRLRSQALDAFESSDYTAAITFLDKILEVCVWDAEL 211
Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153
R+ + K + E+ Y + + +V +
Sbjct: 212 RELRAECFIKEGEPRKAISDLKAASKLKNDNTEAFYKISTLYYQLGDHELSLSEVRECLK 271
Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRF 213
+ + + + + ++ A + GR A + E +
Sbjct: 272 LDQDHKRCFAHYKQVKKLNKLIESAEELIRDGRYTEATSKYESVMKTEPSVSEYTIRSKE 331
Query: 214 QLVLANYSDAEHAE----------------EAMARLVEAYVALALMDEA-REVVSLIQER 256
++ D + E A+ EAY+ + DEA ++ + +
Sbjct: 332 RICHCFSKDEKPVEAIRVCSEVLQMEADNVNALKDRAEAYLIEEMYDEAIQDYETAQEHN 391
Query: 257 YPQGYWA---RYVETLVK 271
+ L+K
Sbjct: 392 ENDQQIREGLEKAQRLLK 409
>gi|78778008|ref|YP_394323.1| TPR repeat-containing protein [Sulfurimonas denitrificans DSM 1251]
gi|78498548|gb|ABB45088.1| TPR repeat [Sulfurimonas denitrificans DSM 1251]
Length = 788
Score = 35.5 bits (79), Expect = 7.9, Method: Composition-based stats.
Identities = 13/82 (15%), Positives = 30/82 (36%)
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
A R + K + + + L +YS E+ E ++ + AY + L +A
Sbjct: 213 RAELLFYKIRSHAKLNDNDKLVEVAKDYLRDYSSDENVAEVLSLIARAYNKIGLNSDAEY 272
Query: 249 VVSLIQERYPQGYWARYVETLV 270
+ + +A++ +
Sbjct: 273 FYDRLFSEHYDSIYAKWGYIYM 294
>gi|330506551|ref|YP_004382979.1| TPR-repeat-containing protein [Methanosaeta concilii GP-6]
gi|328927359|gb|AEB67161.1| TPR-repeat protein [Methanosaeta concilii GP-6]
Length = 261
Score = 35.5 bits (79), Expect = 8.0, Method: Composition-based stats.
Identities = 25/251 (9%), Positives = 55/251 (21%), Gaps = 19/251 (7%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSR----DVYLDSVTDVRYQREVYEKAV--------- 65
+ IA+ + + L S D E Y++A+
Sbjct: 1 MKLIYPLFILIIAIAAPSTCQENAEEWLERGNELFSQGDYEEAIEAYDEALRLDPENPVA 60
Query: 66 ------LFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
+ ++ + +A + F++ R P A + + A
Sbjct: 61 WSNKGTALINQRRYEEAIQAFDEVIRIDPELASAWSYKGGALHELGEYDEAIVALDQAIG 120
Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
+ ++ Y + + + R S + + A
Sbjct: 121 LEPENGSIWSLKGSALYFQGEYDEALTAIEEAIRLEPDSTIAWSLKADILYEQGDYQEAI 180
Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
V + + + +A EA A
Sbjct: 181 TAVDEVIRLMPDYPAAWSNRGELLWRLERYDESLEALDRAIQLDSDLADAWYNRGEALKA 240
Query: 240 LALMDEAREVV 250
+EA
Sbjct: 241 QGRDEEADVAY 251
>gi|289168139|ref|YP_003446408.1| hypothetical protein smi_1300 [Streptococcus mitis B6]
gi|288907706|emb|CBJ22543.1| conserved hypothetical protein [Streptococcus mitis B6]
Length = 403
Score = 35.5 bits (79), Expect = 8.0, Method: Composition-based stats.
Identities = 22/230 (9%), Positives = 63/230 (27%), Gaps = 4/230 (1%)
Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
+++ + ++ +E A L+ ++ + KA YF Q +
Sbjct: 178 ETATEFLEKALELEYDDLTAFELASLYFDQEEYQKAVLYFKQIDTI---SPDFEGYEYGY 234
Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
+ + + Q+A + ++ + + P + Y A +
Sbjct: 235 SQALHKEHQVQEALRIAKQGLEKNPFETRLLLAASQFSYELHDASGAENYLLTAKEDAED 294
Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANY 220
I+ R + + +++ + E ++
Sbjct: 295 T-EEILLRLATIYLEQERYEDILDLQSEEPENLLTKWMIARSYQEMDDLDTAYEHYQELT 353
Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
D + E + + L +EA+ + P + + +
Sbjct: 354 GDLKDNPEFLEHYIYLLRELGYFEEAKVNAQAYLKLVPDDVQMQELYERL 403
>gi|255534040|ref|YP_003094412.1| TPR repeat-containing protein [Pedobacter heparinus DSM 2366]
gi|255347024|gb|ACU06350.1| TPR repeat-containing protein [Pedobacter heparinus DSM 2366]
Length = 467
Score = 35.5 bits (79), Expect = 8.0, Method: Composition-based stats.
Identities = 17/200 (8%), Positives = 48/200 (24%)
Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
+ Y K ++ +++A E + Q P ++ + +
Sbjct: 234 KDNFASAYYNKGNALVQLDRYTEAIEVYKQTFEYEPPNADTYCAIGECYEKLERMDEARS 293
Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
+ + ++ V Y + + + + + +
Sbjct: 294 YYKKSVKMDAKMADAWFGIGVTLNFEERYFESLHFYRKALELDAENPDFWFAMADAHYKL 353
Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232
++ + + E + + + + A E R
Sbjct: 354 GQIEQSVEAYYKVLEYNPVDVEAWLDFSTVLYEQGKLLEASETMSDAIKNNPDAAELYYR 413
Query: 233 LVEAYVALALMDEAREVVSL 252
+V AL EA +
Sbjct: 414 MVAYLFALGKKSEALLYLET 433
>gi|225619824|ref|YP_002721081.1| ABC transporter substrate binding protein [Brachyspira
hyodysenteriae WA1]
gi|225214643|gb|ACN83377.1| ABC transporter substrate binding protein [Brachyspira
hyodysenteriae WA1]
Length = 329
Score = 35.5 bits (79), Expect = 8.0, Method: Composition-based stats.
Identities = 5/35 (14%), Positives = 12/35 (34%), Gaps = 2/35 (5%)
Query: 15 WAYQ--LYKFALTIFFSIAVCFLVGWERQSSRDVY 47
++ + L I SI + F+ + +
Sbjct: 1 MIFKGDIIMKKLFIALSIVILFIASCSSKKDNENI 35
>gi|15639938|ref|NP_219391.1| hypothetical protein TP0954 [Treponema pallidum subsp. pallidum
str. Nichols]
gi|189026177|ref|YP_001933949.1| hypothetical protein TPASS_0954 [Treponema pallidum subsp. pallidum
SS14]
gi|3323274|gb|AAC65909.1| conserved hypothetical protein [Treponema pallidum subsp. pallidum
str. Nichols]
gi|189018752|gb|ACD71370.1| hypothetical protein TPASS_0954 [Treponema pallidum subsp. pallidum
SS14]
gi|291060309|gb|ADD73044.1| putative tetratricopeptide repeat protein [Treponema pallidum
subsp. pallidum str. Chicago]
Length = 478
Score = 35.5 bits (79), Expect = 8.0, Method: Composition-based stats.
Identities = 24/216 (11%), Positives = 53/216 (24%)
Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
+ D T + Y A++ +++ K +Y + P A
Sbjct: 101 EKLGQDGPTASETVQLWYAHAMIAQAKRDVRKKKQYVEKILAQDPHDLWALTERGYDFLS 160
Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
+ QA S + +++ Y + + + T + ++
Sbjct: 161 VNDYAQAVQAFSRALRVEPRAQDARVGLGKVYYLQGKMQEAEAQYRQVLQDTPEHERALA 220
Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
+ V A + + + +
Sbjct: 221 ECARVKAETNRVLEAIRDLERVVQLDPHDPAYWTDLGTYLSQAGKKERAAAAFERAVALS 280
Query: 224 EHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
A A L Y L ++A E + YP+
Sbjct: 281 ADAYFAHIYLGGIYDELGRAEKAIEHYQRAVQLYPK 316
>gi|121998569|ref|YP_001003356.1| hypothetical protein Hhal_1790 [Halorhodospira halophila SL1]
gi|121589974|gb|ABM62554.1| Tetratricopeptide TPR_2 repeat protein [Halorhodospira halophila
SL1]
Length = 241
Score = 35.5 bits (79), Expect = 8.0, Method: Composition-based stats.
Identities = 20/239 (8%), Positives = 46/239 (19%), Gaps = 8/239 (3%)
Query: 29 SIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP 88
+AV + G + D R + + E +A + +
Sbjct: 1 MLAVLMVAGCATGP------EVPDDRRAADSHAGAGLYLIAEGQPDQARSRLERALQIDA 54
Query: 89 FAGV--ARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIR 146
L+ + A + + + + + A +
Sbjct: 55 EHPQALTGMGLVAESQGDAQAAHGYHQRAAQADPDSGAILNNWGRSLCRAGEEDDALAVF 114
Query: 147 DVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEY 206
++ ++ A R
Sbjct: 115 AEAAQVDGYDAAEVPLTNAARCALDAGREDAAARRADAAVEAAPEFAPARVVRGELRYRQ 174
Query: 207 VAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARY 265
A + + A +EA + ER+P W+
Sbjct: 175 GALEAAADDLARARDSGGAGARGLYWSARVAAARDRPEEAAAFAQRLAERFPGSEWSER 233
>gi|319900831|ref|YP_004160559.1| integral membrane sensor signal transduction histidine kinase
[Bacteroides helcogenes P 36-108]
gi|319415862|gb|ADV42973.1| integral membrane sensor signal transduction histidine kinase
[Bacteroides helcogenes P 36-108]
Length = 502
Score = 35.5 bits (79), Expect = 8.1, Method: Composition-based stats.
Identities = 19/218 (8%), Positives = 45/218 (20%), Gaps = 15/218 (6%)
Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
+ K +F + + E+ ++A L ++ ++KA
Sbjct: 1 MMKKIITILFLAFLCA--------------YSQIHAQNRADELMKQAQENLAKKEYTKAR 46
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
F Q F RK++ + E +
Sbjct: 47 YLFLQAYNTFSSQEQYRKAVECGINASALYHRENYYKEAFELLRGAEMTVAAGEQKNGKA 106
Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
+I + + + A G
Sbjct: 107 MPELHFLINKERLQMYIGLKNPTRAKEQLSKLEETAEASRNDSLNNDLLYTQANYYYTFG 166
Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
+ I +++ NY + + +
Sbjct: 167 QNAQGDAAINRLIGKYKE-QKNYDKVSECYKTLINIAR 203
>gi|302754366|ref|XP_002960607.1| hypothetical protein SELMODRAFT_164431 [Selaginella moellendorffii]
gi|300171546|gb|EFJ38146.1| hypothetical protein SELMODRAFT_164431 [Selaginella moellendorffii]
Length = 810
Score = 35.5 bits (79), Expect = 8.1, Method: Composition-based stats.
Identities = 11/46 (23%), Positives = 17/46 (36%)
Query: 215 LVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
+ Y + A +VE YV MDEA + + +P
Sbjct: 252 HMTELYPQVKPNARTYALIVECYVKFNFMDEAMRHFRALTKLFPGS 297
>gi|291280518|ref|YP_003497353.1| flagellar L-ring protein FlgH [Deferribacter desulfuricans SSM1]
gi|290755220|dbj|BAI81597.1| flagellar L-ring protein FlgH [Deferribacter desulfuricans SSM1]
Length = 238
Score = 35.5 bits (79), Expect = 8.1, Method: Composition-based stats.
Identities = 7/45 (15%), Positives = 13/45 (28%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEK 63
+ K TI I G ++ +V + Y+
Sbjct: 1 MMKKNFTISLIILSFMFYGCAKKVVTEVPSTDYKKEIEEYRKYQA 45
>gi|209527396|ref|ZP_03275903.1| serine/threonine protein kinase with TPR repeats [Arthrospira
maxima CS-328]
gi|209492187|gb|EDZ92535.1| serine/threonine protein kinase with TPR repeats [Arthrospira
maxima CS-328]
Length = 687
Score = 35.5 bits (79), Expect = 8.1, Method: Composition-based stats.
Identities = 32/235 (13%), Positives = 63/235 (26%), Gaps = 27/235 (11%)
Query: 32 VCFLVGW-ERQSSRDVYLDSVTDVRYQREVY---EKAVLFLKEQNFSKAYEYFNQCSRDF 87
+ LV +Q + + ++ + + KE N+ KA + Q
Sbjct: 384 ILGLVSCRSQQWKQAIQQLQHGIKLSPKQAWMHANLGWAWGKEGNWQKADQTIQQALNLD 443
Query: 88 PFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRD 147
P + A +F QA + G Q P S + +L ++ A + R
Sbjct: 444 PNSSFALGVKAWISFHLRQWKIVVQAGTQGIFKSQQQPSSVAIALKSWLYPLTIAALERV 503
Query: 148 VPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYV 207
LQ ++ V + ++ +
Sbjct: 504 TTNKSGDITRRLQAFTQQVPNNA----------LALGFKAWYEYRKSDHVSCRQSLNLAS 553
Query: 208 AAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
V+ N Y L +A + + I ++ P+ W
Sbjct: 554 QCPEIPDWVMRNG-------------GLIYEHLGDFQKAADWYNKIYQKQPKDAW 595
>gi|195382543|ref|XP_002049989.1| GJ20442 [Drosophila virilis]
gi|194144786|gb|EDW61182.1| GJ20442 [Drosophila virilis]
Length = 1050
Score = 35.5 bits (79), Expect = 8.1, Method: Composition-based stats.
Identities = 18/205 (8%), Positives = 43/205 (20%), Gaps = 9/205 (4%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
A + ++ A + + + P R L + + E
Sbjct: 148 NLAAALVAARDMESAVQAYITALQYNPELYCVRSDLGNLLKALGRLEEAKACYLKAIETC 207
Query: 122 ---TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
+ + + +++ A
Sbjct: 208 PGFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAA 267
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
A + Y ++G AI ++ + + +A L A
Sbjct: 268 YLRALNLSPNNAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPNFP---DAYCNLANALK 324
Query: 239 ALALMDEARE---VVSLIQERYPQG 260
+ EA E + +
Sbjct: 325 EKGQVKEAEECYNTALRLCSNHADS 349
>gi|167753497|ref|ZP_02425624.1| hypothetical protein ALIPUT_01771 [Alistipes putredinis DSM 17216]
gi|167658122|gb|EDS02252.1| hypothetical protein ALIPUT_01771 [Alistipes putredinis DSM 17216]
Length = 671
Score = 35.5 bits (79), Expect = 8.1, Method: Composition-based stats.
Identities = 22/203 (10%), Positives = 44/203 (21%)
Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
Y + L+ + + +A E F++ A + + +
Sbjct: 131 PDAYYSRGYTRLQNKQYEEAIEDFDKFIFQENKVADAYIGRGTAYLYLKDTVRALENFDQ 190
Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
+ P L YA+ D R L Y+N+
Sbjct: 191 AIRTNRENPNGYYQRGTLLLQKEEYARAEADFDMSIRCDSAFLPPYFNRAVVYSNTNRPM 250
Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
A + + R + + +
Sbjct: 251 QALADFDRVLQLDSTNSFTYFNRAILRTQIGDYNRALDDFDRVALYSPGNVQVYYLRAML 310
Query: 237 YVALALMDEAREVVSLIQERYPQ 259
L ++ A + E YP
Sbjct: 311 KTRLGDLEGAERDYTRAIELYPD 333
>gi|149195041|ref|ZP_01872133.1| TPR repeat [Caminibacter mediatlanticus TB-2]
gi|149134754|gb|EDM23238.1| TPR repeat [Caminibacter mediatlanticus TB-2]
Length = 747
Score = 35.5 bits (79), Expect = 8.1, Method: Composition-based stats.
Identities = 16/188 (8%), Positives = 42/188 (22%)
Query: 83 CSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYA 142
+ L+ ++ + + + Y +
Sbjct: 86 YKIFSFNDNLYNNPLITPFKLKKAKKWVIVVNEQFLSKEKNKGLNFYYHHTYLPYVGAID 145
Query: 143 QMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
+ +R V + + ++ + + + K
Sbjct: 146 ENLRPVNTQISKDVIKFFEILNSYKKGLDVLNEIDNFVKKYPKSIFIPDILYLKLKILDK 205
Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYW 262
I + + Y+ E + + Y + + EA + I YP W
Sbjct: 206 ENRSEDVISLGKKWIKEYAFNPKLPEVLLLIGSNYSKMGFLSEASYYFNRIITDYPNTKW 265
Query: 263 ARYVETLV 270
A +
Sbjct: 266 AYLATIYL 273
>gi|116329905|ref|YP_799623.1| TPR repeat-containing protein [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
gi|116123594|gb|ABJ74865.1| TPR-repeat-containing protein [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
Length = 1197
Score = 35.5 bits (79), Expect = 8.1, Method: Composition-based stats.
Identities = 24/232 (10%), Positives = 61/232 (26%), Gaps = 9/232 (3%)
Query: 39 ERQSSRDVYLDSVTDVRYQREVYEK--AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
L+ + +Y+ + +KA YF + +
Sbjct: 320 GNYRKSVSVLEKSISLFPNNAIYQNQMGLNMKALGEPAKALVYFTKARELDSAFAEPVTN 379
Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
L+ + ++ A + + +D + D+ + +
Sbjct: 380 LVFLLIAENRYKAARKEAESLKSESEKKQIISFIDVSEQIYEGDKHLRQGDIKGAKVFYE 439
Query: 157 LMLQYMSR--IVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ 214
+ S V Y + + A + L+ + + + Q
Sbjct: 440 KAKKASSEEPSVYNAFGRLYFISGDPKSSEENFKKALSINKQNIPALQGLIRLYSSQKNQ 499
Query: 215 LVLANYSD-----AEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGY 261
++ Y+ + A L Y ++A V +Q+++P
Sbjct: 500 NLVNQYTKELENLTGNDPSAAIVLGRTYEDKKEYEKAENVYKNLQKKFPNNE 551
>gi|157827613|ref|YP_001496677.1| hypothetical protein A1I_06620 [Rickettsia bellii OSU 85-389]
gi|157802917|gb|ABV79640.1| hypothetical protein A1I_06620 [Rickettsia bellii OSU 85-389]
Length = 250
Score = 35.5 bits (79), Expect = 8.1, Method: Composition-based stats.
Identities = 24/254 (9%), Positives = 65/254 (25%), Gaps = 20/254 (7%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
+ + F++ L E + + L ++ + + + E
Sbjct: 1 MKLVILIFTLLFSLLTFAESGTIKGQPLKYAASNDFESRL---DEQEQEIRRLIGKIEVL 57
Query: 81 N---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
++ S + + L + + +
Sbjct: 58 QHKIDILSKNSNVPQLSENTETSETDHQNTPDIFDVSLLKDLPNNVEEVKTAPEPNKDVA 117
Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
A + Y T +++Y S + A F+ G
Sbjct: 118 PDKQAYDLALASYKDNKTDDAKNKFKNFIQKYPKSSMISNAYFW--------------YG 163
Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
+ K+ +Y A + + +A+ +L + L EA ++ + + +
Sbjct: 164 ECFFKQKDYNTAAVNYLKGYKESPKGAKSSDALLKLALSLGELKKTTEACNILDKLNKEF 223
Query: 258 PQGYWARYVETLVK 271
P + + +
Sbjct: 224 PGNNRTAASKKMAE 237
>gi|299143657|ref|ZP_07036737.1| conserved hypothetical protein [Peptoniphilus sp. oral taxon 386
str. F0131]
gi|298518142|gb|EFI41881.1| conserved hypothetical protein [Peptoniphilus sp. oral taxon 386
str. F0131]
Length = 197
Score = 35.5 bits (79), Expect = 8.1, Method: Composition-based stats.
Identities = 11/163 (6%), Positives = 36/163 (22%), Gaps = 2/163 (1%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDV--RYQREVYEKAVLFLKEQNFSKA 76
+ K L I L+G + + + + + K +N A
Sbjct: 1 MNKKFLLIIILCFSILLIGCGKNKNTEAEKPETKIQTNKSANDKNTAVSNEQKSKNVEDA 60
Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
+ + + + + I ++
Sbjct: 61 DSENTDILDEPVENETQITGQNVKLSREVLKNLMDNSDYISRVRIQVGQDNTTDVSFLED 120
Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
+ ++ ++P + + + + V +
Sbjct: 121 YKGDLSSVVIELPKNLLQNREYIIFYRDNVNGKIEPVRGAESF 163
>gi|297708519|ref|XP_002831013.1| PREDICTED: tetratricopeptide repeat protein 28-like [Pongo abelii]
Length = 2482
Score = 35.5 bits (79), Expect = 8.1, Method: Composition-based stats.
Identities = 25/203 (12%), Positives = 56/203 (27%), Gaps = 12/203 (5%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
S ++ RE+ +++ +F A + Q + + K A+ +
Sbjct: 348 SKDELSEARELGNMGAVYIAMGDFENAVQCHEQHLKIAK--DLGNKREEARAYSNLGSAY 405
Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
+ + Y + + + M + + + QY + +
Sbjct: 406 HYRRNFDKAMSYHNYVLELAQELMEKAIEMRAYAGLGHAARCMQDLERAKQYHEQQLGIA 465
Query: 170 TN-SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
+ R +G + + K +A SD
Sbjct: 466 EDLKDRAAEGRASSNLGIIHQMKGDYDTALKLHKTHLCIAQEL---------SDYAAQGR 516
Query: 229 AMARLVEAYVALALMDEAREVVS 251
A + AY AL + D+A +
Sbjct: 517 AYGNMGNAYNALGMYDQAVKYHR 539
>gi|304387911|ref|ZP_07370084.1| HemY family protein [Neisseria meningitidis ATCC 13091]
gi|254669888|emb|CBA04384.1| protoporphyrinogen IX and coproporphyrinogen III oxidase HemY
[Neisseria meningitidis alpha153]
gi|304338008|gb|EFM04145.1| HemY family protein [Neisseria meningitidis ATCC 13091]
Length = 405
Score = 35.5 bits (79), Expect = 8.1, Method: Composition-based stats.
Identities = 40/279 (14%), Positives = 80/279 (28%), Gaps = 11/279 (3%)
Query: 1 MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV 60
+ VLG+ + A+ L + + F++G + S R
Sbjct: 28 VYIVLGQTMLRINLHAFVLGSLIAVVVWYFLFKFIIGVFNIPEKMQRFGSARKGRKAALA 87
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
KA L E F KA ++ + +L++ A + E
Sbjct: 88 LNKAGLAYFEGRFEKAELEASRVLGNKEAGDNRTLALMLGAHAAGQMENIELRDRYLAEI 147
Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
+ + Y+ + + A M ++R+V + +G
Sbjct: 148 AKLPEKQQLSRYLLLAESALNRRDYEAAEANLHAAAKMNANLTRLVRLQLRYAFDRGDAL 207
Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEY--------VAAIPRFQLVLANYSDAEHAEEAMAR 232
V +L+ + + A + L D+ E
Sbjct: 208 QVLAKTEKLSKAGALGKSEMERYQNWAYRRQLADAADAAALKTCLKRIPDSLKNGELSVS 267
Query: 233 LVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+ E Y L L +A + +++ YP +E V+
Sbjct: 268 VAEKYERLGLYADAVKW---VKQHYPHNRRPELLEAFVE 303
>gi|221103525|ref|XP_002164032.1| PREDICTED: similar to nephrocystin 3, partial [Hydra
magnipapillata]
Length = 1469
Score = 35.5 bits (79), Expect = 8.1, Method: Composition-based stats.
Identities = 20/206 (9%), Positives = 63/206 (30%), Gaps = 6/206 (2%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFP----FAGVARKSLLMSAFVQY 105
S + + + +++ +++N+ KA +Y+ + + R + ++
Sbjct: 731 SKSHPSFAASLNNLGLVYNRKKNYDKAIKYYEKSLKIHRLIYKDEPHPRVADCLNNIAIT 790
Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
Q ++ + ++ V + + ++Y
Sbjct: 791 YRANGQYDQTIKYYKKSLKIYKFVYQDEFHPVVADTLYNLGIASAAKLQHDEAVKYYDEC 850
Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
+ + Y + + +AA G+Y Y ++ ++L+ +
Sbjct: 851 I-QIYKHIYDDEPHQNIALSFKNIAAVYNAKGQYDKAIECYEESLKVYKLIYQDKPH-PG 908
Query: 226 AEEAMARLVEAYVALALMDEAREVVS 251
++ L + Y D+A +
Sbjct: 909 VVIVLSSLGKVYKNQNKYDQAIKYYE 934
>gi|213580480|ref|ZP_03362306.1| outer membrane protein assembly complex subunit YfiO [Salmonella
enterica subsp. enterica serovar Typhi str. E98-0664]
Length = 40
Score = 35.5 bits (79), Expect = 8.1, Method: Composition-based stats.
Identities = 8/36 (22%), Positives = 16/36 (44%)
Query: 221 SDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
D + +A+ + AY + L +A +V +I
Sbjct: 1 PDTQATRDALPLMENAYRQMQLNAQADKVAKIIAAN 36
>gi|72383029|ref|YP_292384.1| TPR repeat-containing protein [Prochlorococcus marinus str. NATL2A]
gi|72002879|gb|AAZ58681.1| TPR repeat [Prochlorococcus marinus str. NATL2A]
Length = 262
Score = 35.5 bits (79), Expect = 8.1, Method: Composition-based stats.
Identities = 30/248 (12%), Positives = 75/248 (30%), Gaps = 13/248 (5%)
Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
+ + + +++ F+ S + ++EKA+ KE +F +A
Sbjct: 1 MILGRVVKVLLLLSIIFVF----------VPLSTQAKVLPKVLFEKALQESKEGDFIRAE 50
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
+ ++ D+P A + + + E + + +
Sbjct: 51 KDWSSYLNDYPDDAAALSNRGNIRLALGDPKGAIKDQTKAIEISPEDLDPYLNRGIAEEA 110
Query: 138 GMSYAQMIRDVPYDQRATKL---MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
+ +D Y + L + ++ N K N +A
Sbjct: 111 LQRWEDASKDYNYVLKNNPKDVSALYNLGNVMGSMDNWSEAKKLFAQAASSNNAIAMARS 170
Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
+ G+ A + ++++ Y A A++ L+ + L + + +
Sbjct: 171 SEALAIYQLGDLELAEKKIRILIRKYPLFADARAALSALLWSKGFLGEAESNWAAAAGLD 230
Query: 255 ERYPQGYW 262
RY + W
Sbjct: 231 IRYREKEW 238
>gi|313228767|emb|CBY17918.1| unnamed protein product [Oikopleura dioica]
Length = 528
Score = 35.5 bits (79), Expect = 8.2, Method: Composition-based stats.
Identities = 27/192 (14%), Positives = 52/192 (27%), Gaps = 6/192 (3%)
Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
+ AV L + +A+ F + S L + + E
Sbjct: 238 IMNIAVSKLYQGKCEEAFRLFMKASEALYDQPSIWYRLAECCIAHKQETLKEDKQVITEI 297
Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
+ + + + + + + Y + ++
Sbjct: 298 GEGCAR------LAIADHKTQSIEPDQPDDKPRLSYCFAYKCLQNALSYYPTTKTPTMSQ 351
Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
V V + V +G L+ G++ AI + Y D + A EA +
Sbjct: 352 DEVKVMHRMNSTILVTLGFVCLRLGKFSEAIGYTNQSIEKYPDHGYNYFANLYKAEALME 411
Query: 240 LALMDEAREVVS 251
L M EA V
Sbjct: 412 LNEMSEACTVFK 423
>gi|293368286|ref|ZP_06614914.1| D-methionine ABC superfamily ATP binding cassette transporter,
binding protein [Staphylococcus epidermidis
M23864:W2(grey)]
gi|291317533|gb|EFE57951.1| D-methionine ABC superfamily ATP binding cassette transporter,
binding protein [Staphylococcus epidermidis
M23864:W2(grey)]
gi|329737567|gb|EGG73813.1| NLPA lipoprotein [Staphylococcus epidermidis VCU045]
Length = 270
Score = 35.5 bits (79), Expect = 8.2, Method: Composition-based stats.
Identities = 10/70 (14%), Positives = 20/70 (28%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K I L ++ + E+ EKA LK++ + +
Sbjct: 1 MKKLFGIILVLALTIALAACGGGKDKEKTITVGASPAPHAEILEKAKPLLKKKGYDLKIK 60
Query: 79 YFNQCSRDFP 88
N +
Sbjct: 61 PINDYTTPNK 70
>gi|281345253|gb|EFB20837.1| hypothetical protein PANDA_018638 [Ailuropoda melanoleuca]
Length = 1261
Score = 35.5 bits (79), Expect = 8.2, Method: Composition-based stats.
Identities = 16/176 (9%), Positives = 52/176 (29%), Gaps = 3/176 (1%)
Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
A + ++++ KA +++ + L Q + ++ +
Sbjct: 883 AKHSVAQRDYEKAIKFYREALVHCETDNKIMLELARLYLAQDEPDACLRHCAMLLQSDQD 942
Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
+ + Y Q + + +SR+++ ++ +
Sbjct: 943 NEAATMMMADLMFRKQDYEQAVFHLQQLLERKPDNYMTLSRLIDFLRRCGKLEDVPRFFL 1002
Query: 184 VGRNQLAAKEVEIGRYYLKRGEYV---AAIPRFQLVLANYSDAEHAEEAMARLVEA 236
+ + + ++E G Y K + D++ + A+ ++E
Sbjct: 1003 MAEKRNSRAKLEPGFQYCKGLYLWYTGEPNDALRHFNKARKDSDWGQNALYNMIEI 1058
>gi|296127530|ref|YP_003634782.1| Cupin 2 conserved barrel domain protein [Brachyspira murdochii DSM
12563]
gi|296019346|gb|ADG72583.1| Cupin 2 conserved barrel domain protein [Brachyspira murdochii DSM
12563]
Length = 174
Score = 35.5 bits (79), Expect = 8.2, Method: Composition-based stats.
Identities = 9/174 (5%), Positives = 37/174 (21%), Gaps = 2/174 (1%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQ--NFSKA 76
+ K+ L F + V S + + +K + ++
Sbjct: 1 MKKYLLITFTLSIIFTAVSCNAGSKEASNGYEYAKSPEETVLIKKGDGQKSKGSADYFTG 60
Query: 77 YEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL 136
+ + + + + + + L + + +
Sbjct: 61 DVEVESITAPNETSKFSVAYVTFQPGARSAWHTHPAGQHLIVVEGVGLTQEEGKPIQEFR 120
Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
G + + +++++ + N+
Sbjct: 121 AGDILYCPSNVKHWHGASPNSYMKHVAITGDSNGNNVTWMEHVTDEEYYSYTNQ 174
>gi|167465246|ref|ZP_02330335.1| hypothetical lipoprotein [Paenibacillus larvae subsp. larvae
BRL-230010]
Length = 228
Score = 35.5 bits (79), Expect = 8.3, Method: Composition-based stats.
Identities = 16/202 (7%), Positives = 42/202 (20%), Gaps = 8/202 (3%)
Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
++ K + I ++ + + + D + ++ N A
Sbjct: 9 KMKKIGIFILTAVVCLAVSACGSKLPEPADIVEGVDKCE--------ICNMQVANNQHAT 60
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
+ + F + + + +E+I S D +
Sbjct: 61 QIILNDGKILKFDDLGDMYAWIKKNGKGKIKVQYVRDFHSKEWINAKEASYLYDQEFQTP 120
Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
+D + K + E + + E + G
Sbjct: 121 MAFGVLSFKDKNGAESYQKEQQKGKLLTYEDLDKHSWEPNREMMKKMKEEHGGGHEHKDG 180
Query: 198 RYYLKRGEYVAAIPRFQLVLAN 219
+ Q
Sbjct: 181 EQGHQDHGKQDGEHGGQDNNHK 202
>gi|110802315|ref|YP_698451.1| TPR repeat-containing protein [Clostridium perfringens SM101]
gi|110682816|gb|ABG86186.1| tetratricopeptide repeat protein [Clostridium perfringens SM101]
Length = 473
Score = 35.5 bits (79), Expect = 8.3, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 35/110 (31%), Gaps = 6/110 (5%)
Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS----- 221
++Y ++ + + +G Y + AI FQ L +Y
Sbjct: 360 KKYEDALKDFEKAYAFSSDSYLRPHLIYFMGTSYENLDKNTEAIKYFQEYLKDYKAKPDA 419
Query: 222 -DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLV 270
D + + + L Y E+++ I+ YP + V +
Sbjct: 420 EDFMYTPQCLYNLAILYNKEGNSAESKKYAQEIENDYPNTMFYNDVTKKI 469
>gi|313675474|ref|YP_004053470.1| hypothetical protein [Marivirga tractuosa DSM 4126]
gi|312942172|gb|ADR21362.1| Tetratricopeptide TPR_1 repeat-containing protein [Marivirga
tractuosa DSM 4126]
Length = 1579
Score = 35.5 bits (79), Expect = 8.3, Method: Composition-based stats.
Identities = 20/217 (9%), Positives = 51/217 (23%), Gaps = 6/217 (2%)
Query: 33 CFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGV 92
F +G QS+ + V Q+ + + + + +A ++ +
Sbjct: 968 FFELGNFSQSAEQLRKAVDKGVSDQKVIENLGNALYEGKKYEEASKFLQKAIGFGTQNPK 1027
Query: 93 ARKSLLMSAFVQYSAGKYQQAASLGEEYITQY---PESKNVDYVYYLVGMSYAQMIRDVP 149
+ F + ++ + ++ + Q +
Sbjct: 1028 THYHYANTLFREDRFKDAIKSYDEAIGLGQRDEVIYNNRGKAKAKLEQFEAAIQDYKQSL 1087
Query: 150 YDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAA 209
+ ++G Y K G + A
Sbjct: 1088 SINENYGQAILNRGNAYFEMEAYQEALNDFEKSVELSQTDNDTFTKMGLSYYKLGNFEQA 1147
Query: 210 IPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
I Y + + AY +L +++A
Sbjct: 1148 IVMMDQA---YQTGNQSADVFYGRGNAYYSLGEIEKA 1181
>gi|311270844|ref|XP_003133000.1| PREDICTED: tetratricopeptide repeat protein 28-like [Sus scrofa]
Length = 2366
Score = 35.5 bits (79), Expect = 8.3, Method: Composition-based stats.
Identities = 25/203 (12%), Positives = 56/203 (27%), Gaps = 12/203 (5%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
S ++ RE+ +++ +F A + Q + + K A+ +
Sbjct: 234 SKDELSEARELGNMGAVYIAMGDFENAVQCHEQHLKIAK--DLGNKREEARAYSNLGSAY 291
Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
+ + Y + + + M + + + QY + +
Sbjct: 292 HYRRNFDKAMSYHNYVLELAQELMEKAIEMRAYAGLGHAARCMQDLERAKQYHEQQLGIA 351
Query: 170 TN-SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
+ R +G + + K +A SD
Sbjct: 352 EDLKDRAAEGRASSNLGIIHQMKGDYDTALKLHKTHLCIAQEL---------SDYAAQGR 402
Query: 229 AMARLVEAYVALALMDEAREVVS 251
A + AY AL + D+A +
Sbjct: 403 AYGNMGNAYNALGMYDQAVKYHR 425
>gi|222423063|dbj|BAH19513.1| AT3G04240 [Arabidopsis thaliana]
Length = 750
Score = 35.5 bits (79), Expect = 8.3, Method: Composition-based stats.
Identities = 28/204 (13%), Positives = 57/204 (27%), Gaps = 9/204 (4%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
A ++++ S+A + Q P A +L Q +
Sbjct: 160 NLASAYMRKGRLSEATQCCQQALSLNPLLVDAHSNLGNLMKAQGLIHEAYSCYLEAVRIQ 219
Query: 122 ---TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
+ ++ Q ++ + A + + +
Sbjct: 220 PTFAIAWSNLAGLFMESGDLNRALQYYKEAVKLKPAFPDAYLNLGNVYKALGRPTEAIMC 279
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
+ R A I Y ++G+ AI ++ L+ EA L A
Sbjct: 280 YQHALQMRPNSAMAFGNIASIYYEQGQLDLAIRHYKQALSRDPRFL---EAYNNLGNALK 336
Query: 239 ALALMDEAREVVS---LIQERYPQ 259
+ +DEA + +Q +PQ
Sbjct: 337 DIGRVDEAVRCYNQCLALQPNHPQ 360
>gi|78186372|ref|YP_374415.1| TPR repeat-containing protein [Chlorobium luteolum DSM 273]
gi|78166274|gb|ABB23372.1| TPR repeat [Chlorobium luteolum DSM 273]
Length = 435
Score = 35.5 bits (79), Expect = 8.3, Method: Composition-based stats.
Identities = 15/189 (7%), Positives = 44/189 (23%), Gaps = 8/189 (4%)
Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
Y +A + A E + Q P A +L ++ + +
Sbjct: 210 AWYNRANVLAINGRIEDAAESYRQTLIYEPDDINALYNLGIACEELELYTEAVECYQKCI 269
Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
+ + + + D + + + + Y
Sbjct: 270 AQSADFAD----AWFALACCYDAMEKYPDAFHAVMESLKHIPDSIEYLLLKAEIEYNMND 325
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA----EHAEEAMARLV 234
++ + E + ++ + + + + +A +
Sbjct: 326 LDDSIETYRRVIDLDPESPQIWVDFAMVLKEAGHMNTSIEALEQSLKLQPLSADAHFEIA 385
Query: 235 EAYVALALM 243
AY A+
Sbjct: 386 AAYFAMGDK 394
>gi|332291862|ref|YP_004430471.1| TPR domain protein [Krokinobacter diaphorus 4H-3-7-5]
gi|332169948|gb|AEE19203.1| TPR domain protein [Krokinobacter diaphorus 4H-3-7-5]
Length = 847
Score = 35.5 bits (79), Expect = 8.4, Method: Composition-based stats.
Identities = 27/234 (11%), Positives = 56/234 (23%), Gaps = 15/234 (6%)
Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
F + L R++ + + +Y + L+E
Sbjct: 1 MKLLLKRLFFIGVTTLSLSSCSRKNDSFLSRNFHAVTTEFNTLYN-GNVALEEGK----- 54
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
N + F + AF + +A + + + + +
Sbjct: 55 ---NALVQTFNDDYWDILPIERIAFEENTALGEENRDPNFLRAEEKAIK----AIQNHAM 107
Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
+ + + Y + V YV KE
Sbjct: 108 KIDGEERNPQMDEAFLLLGKARYYDQQFVPALEAFNYVLAYYPKSNNIAQAKIWKEKTNI 167
Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
R F++ +A A L +AY+ L + D A + +
Sbjct: 168 RLENNEVAIKNLKQIFKVEKNLKDQDIA--DAHAMLTQAYLNLGIQDSAFQYIQ 219
>gi|332520954|ref|ZP_08397414.1| Cytochrome-c peroxidase [Lacinutrix algicola 5H-3-7-4]
gi|332043484|gb|EGI79680.1| Cytochrome-c peroxidase [Lacinutrix algicola 5H-3-7-4]
Length = 348
Score = 35.5 bits (79), Expect = 8.4, Method: Composition-based stats.
Identities = 18/194 (9%), Positives = 50/194 (25%), Gaps = 4/194 (2%)
Query: 23 ALTIFFSIAVCFLVGWERQSS----RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
IFF + + V +S + + T + +Y + + F +
Sbjct: 2 KKIIFFLLGIVCCVSCSNESQVAVYEPIPMVIETPSNFPDIIYNLDNNPITQAGFELGKK 61
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
F + A + + + G + P ++
Sbjct: 62 LFYEGKLSSNNAIACAFCHEQAFAFTHHGHNLSHGVNGGIGFRNAQPIQNLAYQTSFMWD 121
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
S + + + M + +S I+++ + PY + ++
Sbjct: 122 GSASHLDLQPIIPITSELEMGESLSNIIQKLSAEPYYQEQFTRAFNDGEINTENMLKALS 181
Query: 199 YYLKRGEYVAAIPR 212
++ +
Sbjct: 182 QFMVAMVSSNSKYD 195
>gi|307634806|gb|ADI83951.2| TPR domain lipoprotein [Geobacter sulfurreducens KN400]
Length = 247
Score = 35.5 bits (79), Expect = 8.4, Method: Composition-based stats.
Identities = 31/256 (12%), Positives = 63/256 (24%), Gaps = 18/256 (7%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
+F + + + Y+ + L E + ++A
Sbjct: 1 MRFTRILP-MVLCFLVAACAAND---------ASRNQASYHYQMGLSHLGENDTTRALIE 50
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGM 139
F + + P + SL ++ F + + Y +++N V YL
Sbjct: 51 FIEAEKITPDDPILLNSLGLAYFYKKRFDLAELKFRKAISLKPDYSDARNNLGVNYLEMQ 110
Query: 140 SYAQMIRDVPYDQR-----ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEV 194
+ I + + + P + V
Sbjct: 111 RWDDAISQFKLVMADILFLNQEDARINLGLAYLGKGDLPQALETLRASVSHNPRNLIARV 170
Query: 195 EIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQ 254
IGR Y AI ++ + + + A L A+V A +
Sbjct: 171 AIGRVYFAMDRAEMAIQEYRKAIEINKNY---QNAHYYLALAHVKQKDYVAAADAFREAI 227
Query: 255 ERYPQGYWARYVETLV 270
P R +
Sbjct: 228 RIAPDSEKGRLSREYL 243
>gi|301786478|ref|XP_002928654.1| PREDICTED: tetratricopeptide repeat protein 21B-like [Ailuropoda
melanoleuca]
Length = 1315
Score = 35.5 bits (79), Expect = 8.4, Method: Composition-based stats.
Identities = 16/176 (9%), Positives = 52/176 (29%), Gaps = 3/176 (1%)
Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
A + ++++ KA +++ + L Q + ++ +
Sbjct: 890 AKHSVAQRDYEKAIKFYREALVHCETDNKIMLELARLYLAQDEPDACLRHCAMLLQSDQD 949
Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
+ + Y Q + + +SR+++ ++ +
Sbjct: 950 NEAATMMMADLMFRKQDYEQAVFHLQQLLERKPDNYMTLSRLIDFLRRCGKLEDVPRFFL 1009
Query: 184 VGRNQLAAKEVEIGRYYLKRGEYV---AAIPRFQLVLANYSDAEHAEEAMARLVEA 236
+ + + ++E G Y K + D++ + A+ ++E
Sbjct: 1010 MAEKRNSRAKLEPGFQYCKGLYLWYTGEPNDALRHFNKARKDSDWGQNALYNMIEI 1065
>gi|297693599|ref|XP_002824108.1| PREDICTED: intraflagellar transport protein 88 homolog [Pongo
abelii]
Length = 840
Score = 35.5 bits (79), Expect = 8.4, Method: Composition-based stats.
Identities = 20/226 (8%), Positives = 55/226 (24%), Gaps = 31/226 (13%)
Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
+D + K ++ KA E++ + R+ S
Sbjct: 492 SDRYNPAALTNKGNTVFANGDYEKAAEFYKEALRNDS-----------SCTEALYNIGKA 540
Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
+ + + I ++ ++++ ++V
Sbjct: 541 LTYEKTKSGXMRLWDCFLKLSAILRNSAEVLYQIANIYELMENPSQAIEWLMQVVSVIPT 600
Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231
+ ++ K YY + I + + A Y D + E+A+
Sbjct: 601 D---PQVLSKLGELYDREGDKSQAFQYYYESYRYFPCNIEVIEWLGAYYIDTQFWEKAIQ 657
Query: 232 R-----------------LVEAYVALALMDEAREVVSLIQERYPQG 260
+ + +A + ++P+
Sbjct: 658 YFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDTHRKFPEN 703
>gi|254483485|ref|ZP_05096713.1| tetratricopeptide repeat domain protein [marine gamma
proteobacterium HTCC2148]
gi|214036274|gb|EEB76953.1| tetratricopeptide repeat domain protein [marine gamma
proteobacterium HTCC2148]
Length = 669
Score = 35.5 bits (79), Expect = 8.4, Method: Composition-based stats.
Identities = 27/210 (12%), Positives = 48/210 (22%), Gaps = 2/210 (0%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
T EV +A L L+ A + L + +
Sbjct: 5 DQTVSSTPDEVLREAKLQLQRGQLQAAISTLQHLLVEQAQHREGLYYLAVCYRQNANNTA 64
Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
+ + +Y + + +L + RY
Sbjct: 65 AAEVLARLISAHPRYGRAYQENGHNLAAMQEADAATTAFEKAVALNPALLGSWRALQGRY 124
Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
+ A R + Q+ H +EA
Sbjct: 125 QYIGATQKAEEAQNHVRWLSGMP--PQLQTVSSLLYEDKLYVAEQICRQYLQQEPHHKEA 182
Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQ 259
M L E L ++D+A ++ E YP
Sbjct: 183 MRLLAEIGNKLQILDDAEFLLESCIEFYPD 212
>gi|242023889|ref|XP_002432363.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase,
putative [Pediculus humanus corporis]
gi|212517786|gb|EEB19625.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase,
putative [Pediculus humanus corporis]
Length = 1041
Score = 35.5 bits (79), Expect = 8.4, Method: Composition-based stats.
Identities = 17/190 (8%), Positives = 43/190 (22%), Gaps = 6/190 (3%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
A + + +A + + + P R L + + E
Sbjct: 134 NLAAALVAAGDMEQAVQAYVTALQYNPDLYCVRSDLGNLLKALGRLDEAKACYLKAIETY 193
Query: 122 TQY---PESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
+ + + + + +++ A
Sbjct: 194 SDFAVAWSNLGCVFNATGEIWLAIHHFEKAVALDPNFLDAYINLGNVLKEARIFDRAVAA 253
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
A + Y ++G AI ++ + + +A L A
Sbjct: 254 YLRALNLSPNNAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPNFP---DAYCNLANALK 310
Query: 239 ALALMDEARE 248
+ EA +
Sbjct: 311 EKGQVPEAED 320
>gi|25146922|ref|NP_741021.1| abnormal DYe Filling family member (dyf-13) [Caenorhabditis
elegans]
gi|15145289|gb|AAK84493.1|U14635_7 Abnormal dye filling protein 13, isoform a [Caenorhabditis elegans]
Length = 574
Score = 35.5 bits (79), Expect = 8.4, Method: Composition-based stats.
Identities = 23/199 (11%), Positives = 52/199 (26%), Gaps = 4/199 (2%)
Query: 66 LFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYP 125
FL Q++ A N + SL + Y + + A+ ++
Sbjct: 28 DFLSNQDYEGAISLLNHKLKAGNLDREEEDSLQLWLAHCYYRLRNYEEAANVYTFLMNKD 87
Query: 126 ESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVG 185
++ VY Y + + + R++ + +
Sbjct: 88 DAPAELGVYLACCKFYLKQYIEAKSIAEKCPKTPLCI-RLMMNVSLRLNDEKRILTFHSS 146
Query: 186 RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDE 245
+ + R Y AI + VL + + Y +
Sbjct: 147 LGDTLEDRLSLAGVNYSRMHYQDAIEVYTSVLQTSPNLIGL---NVNMALCYAKMDYPHV 203
Query: 246 AREVVSLIQERYPQGYWAR 264
A ++ +P +A+
Sbjct: 204 AYNLIKNYLRNFPNSPFAK 222
>gi|73994867|ref|XP_543463.2| PREDICTED: similar to TPR repeat containing protein KIAA1043
isoform 1 [Canis familiaris]
Length = 2469
Score = 35.5 bits (79), Expect = 8.4, Method: Composition-based stats.
Identities = 25/203 (12%), Positives = 56/203 (27%), Gaps = 12/203 (5%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
S ++ RE+ +++ +F A + Q + + K A+ +
Sbjct: 347 SKDELSEARELGNMGAVYIAMGDFENAVQCHEQHLKIAK--DLGNKREEARAYSNLGSAY 404
Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
+ + Y + + + M + + + QY + +
Sbjct: 405 HYRRNFDKAMSYHNYVLELAQELMEKAIEMRAYAGLGHAARCMQDLERAKQYHEQQLGIA 464
Query: 170 TN-SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
+ R +G + + K +A SD
Sbjct: 465 EDLKDRAAEGRASSNLGIIHQMKGDYDTALKLHKTHLCIAQEL---------SDYAAQGR 515
Query: 229 AMARLVEAYVALALMDEAREVVS 251
A + AY AL + D+A +
Sbjct: 516 AYGNMGNAYNALGMFDQAVKYHR 538
>gi|74227683|dbj|BAE35690.1| unnamed protein product [Mus musculus]
Length = 458
Score = 35.5 bits (79), Expect = 8.4, Method: Composition-based stats.
Identities = 29/191 (15%), Positives = 60/191 (31%), Gaps = 5/191 (2%)
Query: 74 SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
+A + + + + + + + + + ES +
Sbjct: 205 EEAIQRMEKGEHSIVYLKPSYAFGSVGKERFQIPPHAELRYEVRLKSFEKAKESWEMSSA 264
Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
L + + + + K L +IV + V +LA+
Sbjct: 265 EKLEQSNIVKERGTAYFKEGKYKQALLQYKKIV-SWLEYESSFSGEEMQKVHALRLASHL 323
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+ +LK + AAI L S+ E+ + R EA++A+ D AR +
Sbjct: 324 N-LAMCHLKLQAFSAAIESCNKALELDSN---NEKGLFRRREAHLAVNDFDLARADFQKV 379
Query: 254 QERYPQGYWAR 264
+ YP A+
Sbjct: 380 LQLYPSNKAAK 390
>gi|332882456|ref|ZP_08450081.1| conserved domain protein [Capnocytophaga sp. oral taxon 329 str.
F0087]
gi|332679626|gb|EGJ52598.1| conserved domain protein [Capnocytophaga sp. oral taxon 329 str.
F0087]
Length = 486
Score = 35.5 bits (79), Expect = 8.5, Method: Composition-based stats.
Identities = 18/215 (8%), Positives = 50/215 (23%), Gaps = 11/215 (5%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ + T I ++S+ Y + YE+AV +E N + A
Sbjct: 1 MKIYFKTSAIIILSLLFTNCRKEST-----------SYLQRAYEEAVKLHQEGNLNDAVF 49
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
Y+ + + + + A Q+ + + Y
Sbjct: 50 YYQLTALNCQYHPEDSLTYWWKAMCGQGEVWRQKNFLDRAQTDFETVLQNAPKYRLDTAE 109
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGR 198
++ + + +++ Y R + + + R
Sbjct: 110 YIASRKLTLIALERQHYDKAYSYAMRAWKTAAKKQFPETMTDGQENERILAGFACALNNG 169
Query: 199 YYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
+ + ++ +
Sbjct: 170 QAVSDTVFGQMEKLAASPSLELRTTALKLLSLYEM 204
>gi|322796271|gb|EFZ18847.1| hypothetical protein SINV_80216 [Solenopsis invicta]
Length = 1022
Score = 35.5 bits (79), Expect = 8.5, Method: Composition-based stats.
Identities = 28/199 (14%), Positives = 64/199 (32%), Gaps = 18/199 (9%)
Query: 69 KEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESK 128
+ +A ++F R A L + G Q+ + T ++
Sbjct: 528 DKGQIYEASDWFKDALRINNEHPDAWSLLGNLHLAKMEWGPGQKKFERILKNPTTSTDAY 587
Query: 129 NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPY-------------- 174
++ + + + Q +D ++R L +++ + +
Sbjct: 588 SLIALGNIWLQTLHQSGKDKEREKRHQDRALAMYKQVLRNDPKNIWASNGIGAVLAHKGC 647
Query: 175 VKGARFYVTVGRNQLAAKEVEI---GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMA 231
V AR R A Y+++ ++V+AI ++ L + H E +
Sbjct: 648 VNEARDIFAQVREATAEFCDVWLNIAHIYVEQKQFVSAIQMYENCLRKFYKYHHV-EVLQ 706
Query: 232 RLVEAYVALALMDEAREVV 250
L AY + E++ +
Sbjct: 707 YLGRAYFKAGKLKESKLTL 725
>gi|304317962|ref|YP_003853107.1| hypothetical protein Tthe_2571 [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302779464|gb|ADL70023.1| protein of unknown function DUF187 [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 1149
Score = 35.5 bits (79), Expect = 8.5, Method: Composition-based stats.
Identities = 20/206 (9%), Positives = 51/206 (24%), Gaps = 4/206 (1%)
Query: 40 RQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRD----FPFAGVARK 95
++ Y D T + + A +L ++ +A + D + + K
Sbjct: 298 KEFKNIPYDDVQTIIDNAKIKLNNARTYLNNGSYKEAEDVLKSLDDDINKAMYMSFASEK 357
Query: 96 SLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRAT 155
+ +++ + + + + +D + +
Sbjct: 358 VESRAVWIRPKEKNLDEVVRNLDMLKSININTIYLDTFWSGYTIYPTNSKYTSQNPIYGG 417
Query: 156 KLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQL 215
+L + + Y F + + +L +
Sbjct: 418 FDVLDAYIKEAHKRGMVVYAWTENFLIGTSDVSDGGPIKKEKPEWLMVSRKGYNYTLDKY 477
Query: 216 VLANYSDAEHAEEAMARLVEAYVALA 241
+ Y EA L E Y +A
Sbjct: 478 GIKYYYLNPAIPEARDFLSELYKEIA 503
>gi|300864445|ref|ZP_07109316.1| tetratricopeptide TPR_2 [Oscillatoria sp. PCC 6506]
gi|300337589|emb|CBN54464.1| tetratricopeptide TPR_2 [Oscillatoria sp. PCC 6506]
Length = 1129
Score = 35.5 bits (79), Expect = 8.5, Method: Composition-based stats.
Identities = 34/216 (15%), Positives = 62/216 (28%), Gaps = 8/216 (3%)
Query: 41 QSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMS 100
S + V + E ++A +L + NF +A + P A +L +
Sbjct: 301 SSFNFNPPEQVAKFQEVEEYKKRAEAYLLQGNFREAIASCQLALKIRPDFIQAYVTLGNA 360
Query: 101 AFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQ 160
Q +A E+ Y E + Y + I +
Sbjct: 361 LQGQGKMDAAIRAYEQALEFEPNYAEVRANIGSMYFKMGHLEKAIVYYQQAIALKPDLAG 420
Query: 161 YMSRIVERYTNSPYVKGARFYVTVGRNQL-----AAKEVEIGRYYLKRGEYVAAIPRFQL 215
+ + + A Y + A + L G+ AI +Q
Sbjct: 421 VYWNLGKVFQKQGKSAEAIAYFQKTSDINPHVVGADFHFNLANTLLTEGKRDEAIQSYQR 480
Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
+A D EA A + A + ++EA +
Sbjct: 481 AIAVKPD---WAEAYANIGSARMQQGNLEEAIQYYR 513
>gi|296191565|ref|XP_002743706.1| PREDICTED: tetratricopeptide repeat protein 28 [Callithrix jacchus]
Length = 2183
Score = 35.5 bits (79), Expect = 8.5, Method: Composition-based stats.
Identities = 25/203 (12%), Positives = 56/203 (27%), Gaps = 12/203 (5%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
S ++ RE+ +++ +F A + Q + + K A+ +
Sbjct: 51 SKDELSEARELGNMGAVYIAMGDFENAVQCHEQHLKIAK--DLGNKREEARAYSNLGSAY 108
Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
+ + Y + + + M + + + QY + +
Sbjct: 109 HYRRNFDKAMSYHNYVLELAQELMEKAIEMRAYAGLGHAARCMQDLERAKQYHEQQLGIA 168
Query: 170 TN-SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
+ R +G + + K +A SD
Sbjct: 169 EDLKDRAAEGRASSNLGIIHQMKGDYDTALKLHKAHLCIAQEL---------SDYAAQGR 219
Query: 229 AMARLVEAYVALALMDEAREVVS 251
A + AY AL + D+A +
Sbjct: 220 AYGNMGNAYNALGMYDQAVKYHR 242
>gi|255692989|ref|ZP_05416664.1| putative TPR domain protein [Bacteroides finegoldii DSM 17565]
gi|260621301|gb|EEX44172.1| putative TPR domain protein [Bacteroides finegoldii DSM 17565]
Length = 585
Score = 35.5 bits (79), Expect = 8.5, Method: Composition-based stats.
Identities = 24/253 (9%), Positives = 61/253 (24%), Gaps = 10/253 (3%)
Query: 21 KFALTIFFSIAVCFLVGWER----QSSRDVYLDSVTDVRYQRE------VYEKAVLFLKE 70
+ +F I + +V + + + +A+ ++
Sbjct: 1 MKKIILFLLINALLFPLCTTVQGKKKKVRKEEKTVVLQLTEEQQRKYDYFFLEAIRMKEK 60
Query: 71 QNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNV 130
+ ++ A+ C P A A + + Q A Y
Sbjct: 61 KEYATAFGLLQHCLEINPNASSALYEISQYYMFLRQVPQGQAALEKAVAYAPDNYWYSQG 120
Query: 131 DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLA 190
Y + + + + +++ Y++ + +L
Sbjct: 121 LVSLYQQQNELDKAVTLLETMVTRFPAKQDPLFNLLDIYSHQEKYNDVISTLNRLEKRLG 180
Query: 191 AKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
E + + F+ + + + L + Y+ EA E
Sbjct: 181 KNEQLSMEKFRIYLQMKDDKKAFREIESLVQEYPMDMRYQVILGDVYLQNGKKQEAYEAY 240
Query: 251 SLIQERYPQGYWA 263
+ P A
Sbjct: 241 QKVLAVEPDNPMA 253
>gi|172038545|ref|YP_001805046.1| putative prenyltransferase [Cyanothece sp. ATCC 51142]
gi|171699999|gb|ACB52980.1| putative prenyltransferase [Cyanothece sp. ATCC 51142]
Length = 383
Score = 35.5 bits (79), Expect = 8.5, Method: Composition-based stats.
Identities = 31/214 (14%), Positives = 70/214 (32%), Gaps = 9/214 (4%)
Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
V+ L+++N+ A E + + P A + S Q + Q E +
Sbjct: 171 GVVLLRQENYEGAAEAYKRVIALDPNNPEAFAIMGSSLLQQKQLDQALQYLGNAVERFSG 230
Query: 124 YPESK---NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
+ + Y+ + ++ + + ++RI E N
Sbjct: 231 DVDLRLLLATAYLQQGQLELGKEQLQRAERIDPSNTKIQLKIARIYEVQENLDEALKIYR 290
Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVAL 240
++ + +GR L + +Y+ AI ++ ++ E L A+
Sbjct: 291 RISYLNRKSPEAYAGVGRIQLAQKDYLGAIITYKDLIEIIP---QNPEPYYYLGVAFKER 347
Query: 241 ALMDEARE---VVSLIQERYPQGYWARYVETLVK 271
EA++ + + Y + V+ L+K
Sbjct: 348 QRNSEAKKALQYAKKLYQEYDNTEGIKKVDELLK 381
>gi|319891823|ref|YP_004148698.1| Methionine ABC transporter substrate-binding protein
[Staphylococcus pseudintermedius HKU10-03]
gi|317161519|gb|ADV05062.1| Methionine ABC transporter substrate-binding protein
[Staphylococcus pseudintermedius HKU10-03]
gi|323465021|gb|ADX77174.1| putative lipoprotein [Staphylococcus pseudintermedius ED99]
Length = 273
Score = 35.5 bits (79), Expect = 8.6, Method: Composition-based stats.
Identities = 9/73 (12%), Positives = 21/73 (28%), Gaps = 3/73 (4%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQ---REVYEKAVLFLKEQNFSK 75
+ + I L +S+ + E+ E+A LK++ +
Sbjct: 1 MKRILSIIVILALAIGLAACGNKSAEKKDDKKIVVGASPAPHAEILEQAKPLLKDKGYDL 60
Query: 76 AYEYFNQCSRDFP 88
+ N +
Sbjct: 61 EIKTINDYTTPNK 73
>gi|223889263|ref|ZP_03623851.1| hypothetical protein BBU64B_0217 [Borrelia burgdorferi 64b]
gi|223885296|gb|EEF56398.1| hypothetical protein BBU64B_0217 [Borrelia burgdorferi 64b]
Length = 1119
Score = 35.5 bits (79), Expect = 8.6, Method: Composition-based stats.
Identities = 23/219 (10%), Positives = 60/219 (27%)
Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
+ + Y + Q + Y+ ++ K + + + E F+Q + P A + ++
Sbjct: 760 KAENAYEKIIKLTNTQEDHYKLGIIRFKLKKYEHSIESFDQTIKLDPKHKKALHNKGIAL 819
Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
+ K ++ + Y + + Q K
Sbjct: 820 MMLNKNKKAIESFEKAIQIDKNYGTAYYQKGIAEEKNGDMQQAFASFKNAYNLDKNPNYA 879
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
+ + + + + N E+ I + + E + +
Sbjct: 880 LKAGIVSNNLGNFKQSEEYLNFFNANAKKPNEIAIYNLSIAKFENNKLEESLETINKAID 939
Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
E + + A + SL+ E+ P+
Sbjct: 940 LNPEKSEYLYLKASINLKKENYQNAISLYSLVIEKNPEN 978
>gi|121634574|ref|YP_974819.1| hypothetical protein NMC0732 [Neisseria meningitidis FAM18]
gi|161869723|ref|YP_001598890.1| hypothetical protein NMCC_0743 [Neisseria meningitidis 053442]
gi|120866280|emb|CAM10021.1| hypothetical protein NMC0732 [Neisseria meningitidis FAM18]
gi|161595276|gb|ABX72936.1| HemY protein [Neisseria meningitidis 053442]
gi|325142015|gb|EGC64447.1| hypothetical protein NMB9615945_1382 [Neisseria meningitidis
961-5945]
gi|325197999|gb|ADY93455.1| conserved hypothetical protein [Neisseria meningitidis G2136]
Length = 405
Score = 35.5 bits (79), Expect = 8.6, Method: Composition-based stats.
Identities = 40/279 (14%), Positives = 80/279 (28%), Gaps = 11/279 (3%)
Query: 1 MSAVLGRAICIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV 60
+ VLG+ + A+ L + + F++G + S R
Sbjct: 28 VYIVLGQTMLRINLHAFVLGSLIAVVVWYFLFKFIIGVFNIPEKMQRFGSARKGRKAALA 87
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
KA L E F KA ++ + +L++ A + E
Sbjct: 88 LNKAGLAYFEGRFEKAELEASRVLVNKEAGDNRTLALMLGAHAAGQMENIELRDRYLAEI 147
Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARF 180
+ + Y+ + + A M ++R+V + +G
Sbjct: 148 AKLPEKQQLSRYLLLAESALNRRDYEAAEANLHAAAKMNANLTRLVRLQLRYAFDRGDAL 207
Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEY--------VAAIPRFQLVLANYSDAEHAEEAMAR 232
V +L+ + + A + L D+ E
Sbjct: 208 QVLAKTEKLSKAGALGKSEMERYQNWAYRRQLADAADAAALKTCLKRIPDSLKNGELSVS 267
Query: 233 LVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
+ E Y L L +A + +++ YP +E V+
Sbjct: 268 VAEKYERLGLYADAVKW---VKQHYPHNRRPELLEAFVE 303
>gi|109093703|ref|XP_001108189.1| PREDICTED: tetratricopeptide repeat protein 28-like, partial
[Macaca mulatta]
Length = 2354
Score = 35.5 bits (79), Expect = 8.6, Method: Composition-based stats.
Identities = 25/203 (12%), Positives = 56/203 (27%), Gaps = 12/203 (5%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
S ++ RE+ +++ +F A + Q + + K A+ +
Sbjct: 220 SKDELSEARELGNMGAVYIAMGDFENAVQCHEQHLKIAK--DLGNKREEARAYSNLGSAY 277
Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
+ + Y + + + M + + + QY + +
Sbjct: 278 HYRRNFDKAMSYHNYVLELAQELMEKAIEMRAYAGLGHAARCMQDLERAKQYHEQQLGIA 337
Query: 170 TN-SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
+ R +G + + K +A SD
Sbjct: 338 EDLKDRAAEGRASSNLGIIHQMKGDYDTALKLHKTHLCIAQEL---------SDYAAQGR 388
Query: 229 AMARLVEAYVALALMDEAREVVS 251
A + AY AL + D+A +
Sbjct: 389 AYGNMGNAYNALGMYDQAVKYHR 411
>gi|325285198|ref|YP_004260988.1| hypothetical protein Celly_0282 [Cellulophaga lytica DSM 7489]
gi|324320652|gb|ADY28117.1| Tetratricopeptide TPR_1 repeat-containing protein [Cellulophaga
lytica DSM 7489]
Length = 466
Score = 35.5 bits (79), Expect = 8.6, Method: Composition-based stats.
Identities = 25/201 (12%), Positives = 58/201 (28%), Gaps = 9/201 (4%)
Query: 52 TDVRYQREVY-EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
T E+Y ++A +F K+ + +KA + + + L M ++
Sbjct: 92 TIDSNNEEIYIQRANIFSKKDDHNKAIQLLEKALTLSDDSIDIHSLLGM----EHLFMDN 147
Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
+ A + E + + + Y +
Sbjct: 148 FEEAKKHFIQCVLFDEHDYASLYNIIYCFDFLEDFDGAIVFLNDYLEKNPYCEVAWHQLG 207
Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE-- 228
KG + + Y ++G+ + + R+ + NY E+
Sbjct: 208 KQYIEKGMYKEAIAAFDFAIISDDSFVGAYFEKGKILEKLKRYNEAIENYEITIEIEDPS 267
Query: 229 --AMARLVEAYVALALMDEAR 247
A R+ + + + + AR
Sbjct: 268 AFAYLRIGKCHEKIGNTELAR 288
>gi|307354797|ref|YP_003895848.1| TPR repeat-containing protein [Methanoplanus petrolearius DSM
11571]
gi|307158030|gb|ADN37410.1| TPR repeat-containing protein [Methanoplanus petrolearius DSM
11571]
Length = 253
Score = 35.5 bits (79), Expect = 8.6, Method: Composition-based stats.
Identities = 9/64 (14%), Positives = 15/64 (23%), Gaps = 2/64 (3%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K L + F + Y AV ++ A E
Sbjct: 1 MKKILLIFAVFLIAAFFTSPACADENTSAFQITDTGYIDQ--YNNAVDLANSGDYEAALE 58
Query: 79 YFNQ 82
N+
Sbjct: 59 AINK 62
>gi|226320951|ref|ZP_03796499.1| tetratricopeptide repeat domain protein [Borrelia burgdorferi
29805]
gi|226233653|gb|EEH32386.1| tetratricopeptide repeat domain protein [Borrelia burgdorferi
29805]
Length = 1065
Score = 35.5 bits (79), Expect = 8.6, Method: Composition-based stats.
Identities = 23/219 (10%), Positives = 60/219 (27%)
Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
+ + Y + Q + Y+ ++ K + + + E F+Q + P A + ++
Sbjct: 706 KAENAYEKIIKLTNTQEDHYKLGIIRFKLKKYEHSIESFDQTIKLDPKHKKALHNKGIAL 765
Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
+ K ++ + Y + + Q K
Sbjct: 766 MMLNKNKKAIESFEKAIQIDKNYGTAYYQKGIAEEKNGDMQQAFASFKNAYNLDKNPNYA 825
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
+ + + + + N E+ I + + E + +
Sbjct: 826 LKAGIVSNNLGNFKQSEEYLNFFNANAKKPNEIAIYNLSIAKFENNKLEESLETINKAID 885
Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
E + + A + SL+ E+ P+
Sbjct: 886 LNPEKSEYLYLKASINLKKENYQNAISLYSLVIEKNPEN 924
>gi|170288929|ref|YP_001739167.1| TPR repeat-containing protein [Thermotoga sp. RQ2]
gi|170176432|gb|ACB09484.1| Tetratricopeptide TPR_2 repeat protein [Thermotoga sp. RQ2]
Length = 357
Score = 35.5 bits (79), Expect = 8.6, Method: Composition-based stats.
Identities = 28/219 (12%), Positives = 63/219 (28%), Gaps = 9/219 (4%)
Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFN---QCSRDFPFAGVARKSLLMSAFVQYSAGK 109
D Y K L +++ + ++ + + A + + A
Sbjct: 127 DENYAPAYELKGSLLVEQGKIEEGIKFLDKAVEIDPWLVQAYASLGEAYYNLGDYEKAIH 186
Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
Y + Y + + + L +S++
Sbjct: 187 YWERELEYNPSDKITYFMITEAYHEMNRKDLAVKALERLLEIDPDNIPALYQLSQLYREL 246
Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
+ + + + + + R LK G Y + + ++ + + A
Sbjct: 247 GSEEKAREMEEKIMNCKPKYPTELEPWARVMLKHGRYKEVVEELEKIVES---SPLNTLA 303
Query: 230 MARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVET 268
LV YV L +D+ARE++ I +W Y +
Sbjct: 304 RLLLVVPYVKLGQIDKAREILDDIG---QSNFWYYYGKK 339
>gi|13324580|gb|AAK18793.1|AF305601_1 LMP1 [Borrelia burgdorferi]
Length = 957
Score = 35.5 bits (79), Expect = 8.6, Method: Composition-based stats.
Identities = 23/219 (10%), Positives = 60/219 (27%)
Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
+ + Y + Q + Y+ ++ K + + + E F+Q + P A + ++
Sbjct: 598 KAENAYEKIIKLTNTQEDHYKLGIIRFKLKKYEHSIESFDQTIKLDPKHKKALHNKGIAL 657
Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
+ K ++ + Y + + Q K
Sbjct: 658 MMLNKNKKAIESFEKAIQIDKNYGTAYYQKGIAEEKNGDMQQAFASFKNAYNLDKNPNYA 717
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
+ + + + + N E+ I + + E + +
Sbjct: 718 LKAGIVSNNLGNFKQSEEYLNFFNANAKKPNEIAIYNLSIAKFENNKLEESLETINKAID 777
Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
E + + A + SL+ E+ P+
Sbjct: 778 LNPEKSEYLYLKASINLKKENYQNAISLYSLVIEKNPEN 816
>gi|312148550|gb|ADQ31209.1| Surface-located membrane protein 1 (LMP1) [Borrelia burgdorferi
JD1]
Length = 1065
Score = 35.5 bits (79), Expect = 8.7, Method: Composition-based stats.
Identities = 23/219 (10%), Positives = 60/219 (27%)
Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
+ + Y + Q + Y+ ++ K + + + E F+Q + P A + ++
Sbjct: 706 KAENAYEKIIKLTNTQEDHYKLGIIRFKLKKYEHSIESFDQTIKLDPKHKKALHNKGIAL 765
Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
+ K ++ + Y + + Q K
Sbjct: 766 MMLNKNKKAIESFEKAIQIDKNYGTAYYQKGIAEEKNGDMQQAFASFKNAYNLDKNPNYA 825
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
+ + + + + N E+ I + + E + +
Sbjct: 826 LKAGIVSNNLGNFKQSEEYLNFFNANAKKPNEIAIYNLSIAKFENNKLEESLETINKAID 885
Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
E + + A + SL+ E+ P+
Sbjct: 886 LNPEKSEYLYLKASINLKKENYQNAISLYSLVIEKNPEN 924
>gi|300311388|ref|YP_003775480.1| TPR repeat containing protein [Herbaspirillum seropedicae SmR1]
gi|300074173|gb|ADJ63572.1| TPR repeat containing protein [Herbaspirillum seropedicae SmR1]
Length = 658
Score = 35.5 bits (79), Expect = 8.7, Method: Composition-based stats.
Identities = 20/187 (10%), Positives = 47/187 (25%), Gaps = 6/187 (3%)
Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
+ ++ + E F+ A Y + P +L + Q +
Sbjct: 64 RGLVAMHEGKFADAEAYLRKAIEADPENAEYMSNLAGTVLSQDRIDEAIALYEHAIRIDR 123
Query: 123 QYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKG---AR 179
+ S+ + + +S +
Sbjct: 124 DHRASRIGLANALHEKNDPEASVAYFEDAVKREPNAPGPLSHLGRALIECKRYNEAVAVI 183
Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
+ A +G + Y AI + + + A ++ ++Y+
Sbjct: 184 LKSLELQISFAPSHTALGEAFHAMEMYKEAIESHKTAILLDPQDTY---AHNKIADSYLK 240
Query: 240 LALMDEA 246
L +DEA
Sbjct: 241 LNRIDEA 247
>gi|291277600|ref|YP_003517372.1| putative paralysed flagellum protein PflA [Helicobacter mustelae
12198]
gi|290964794|emb|CBG40650.1| putative paralysed flagellum protein, PflA [Helicobacter mustelae
12198]
Length = 774
Score = 35.5 bits (79), Expect = 8.7, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 25/77 (32%)
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+ Y +AI L NYS E + + +Y L E+ I
Sbjct: 216 FFQIKALYHLKRYDSAIDYANAWLKNYSSDTSVPEMLYLVANSYARLRFPSESNYYYRRI 275
Query: 254 QERYPQGYWARYVETLV 270
+ YP +A + +
Sbjct: 276 IDEYPGNRFAALSKIKI 292
>gi|270004555|gb|EFA01003.1| hypothetical protein TcasGA2_TC003916 [Tribolium castaneum]
Length = 1054
Score = 35.5 bits (79), Expect = 8.7, Method: Composition-based stats.
Identities = 18/190 (9%), Positives = 41/190 (21%), Gaps = 6/190 (3%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY- 120
A + + +A + + + P R L + + E
Sbjct: 147 NLAAALVAAGDMEQAVQAYITALQYNPDLYCVRSDLGNLLKALGRLDEAKACYLKAIETR 206
Query: 121 --ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
+ + + +++ A
Sbjct: 207 PDFAVAWSNLGCVFNAQGEIWLAIHHFEKAVGLDPNFLDAYINLGNVLKEARIFDRAVAA 266
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
A + Y ++G AI ++ + + +A L A
Sbjct: 267 YLRALNLSPNNAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPNFP---DAYCNLANALK 323
Query: 239 ALALMDEARE 248
+ EA E
Sbjct: 324 EKGQVAEAEE 333
>gi|241888574|ref|ZP_04775881.1| conserved hypothetical protein [Gemella haemolysans ATCC 10379]
gi|241864597|gb|EER68972.1| conserved hypothetical protein [Gemella haemolysans ATCC 10379]
Length = 144
Score = 35.5 bits (79), Expect = 8.7, Method: Composition-based stats.
Identities = 12/45 (26%), Positives = 18/45 (40%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKA 64
K L I + FLVG + VY+ V+ + +Y K
Sbjct: 1 MKKILQIISVFLLVFLVGCSEKEGSKVYVKKQPGVQMEITLYYKG 45
>gi|221115592|ref|XP_002165527.1| PREDICTED: similar to Putative eukaryotic translation initiation
factor 3 subunit [Hydra magnipapillata]
Length = 1316
Score = 35.5 bits (79), Expect = 8.7, Method: Composition-based stats.
Identities = 19/214 (8%), Positives = 52/214 (24%), Gaps = 2/214 (0%)
Query: 46 VYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQY 105
V + ++E A L+ F +A+E + F V
Sbjct: 1024 VVKYTTPKATDACAIFETAQNRLQAGFFGEAHELMVEALNMFNQ--VYGPLHEDIVVCYR 1081
Query: 106 SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRI 165
+ + A + ++ ++ V + + + + ++
Sbjct: 1082 AIARIHYLADDAPQAVSFQKKAVIVAERIFGIDHPETLVAYVHLALYCYHAGLANASLKL 1141
Query: 166 VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEH 225
+ R + + + + + G + + + + H
Sbjct: 1142 MYRSRYLTLLAFGDDHPDMAAFDTNIGLMLHNQREFSVGCKFLERSCYLQMKYHGPKSIH 1201
Query: 226 AEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
+ + A AL A + Y
Sbjct: 1202 TATSHHLVARALTALGEYKSALNSEKMTFSIYQS 1235
>gi|189235894|ref|XP_967579.2| PREDICTED: similar to AGAP006254-PA [Tribolium castaneum]
Length = 1086
Score = 35.5 bits (79), Expect = 8.7, Method: Composition-based stats.
Identities = 18/190 (9%), Positives = 41/190 (21%), Gaps = 6/190 (3%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY- 120
A + + +A + + + P R L + + E
Sbjct: 179 NLAAALVAAGDMEQAVQAYITALQYNPDLYCVRSDLGNLLKALGRLDEAKACYLKAIETR 238
Query: 121 --ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
+ + + +++ A
Sbjct: 239 PDFAVAWSNLGCVFNAQGEIWLAIHHFEKAVGLDPNFLDAYINLGNVLKEARIFDRAVAA 298
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
A + Y ++G AI ++ + + +A L A
Sbjct: 299 YLRALNLSPNNAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPNFP---DAYCNLANALK 355
Query: 239 ALALMDEARE 248
+ EA E
Sbjct: 356 EKGQVAEAEE 365
>gi|254829000|ref|ZP_05233687.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165]
gi|258601411|gb|EEW14736.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165]
Length = 384
Score = 35.5 bits (79), Expect = 8.7, Method: Composition-based stats.
Identities = 19/155 (12%), Positives = 41/155 (26%), Gaps = 1/155 (0%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K + + +VG + + T Q +K V +K N +
Sbjct: 1 MKKLIIVMLTIFTAVLVVGCSGMADKAETKKETTKESKQANAVKKEVKEMKS-NLENVKK 59
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVG 138
+ + + A F Y + E+Y T D +
Sbjct: 60 AISDKDKSALQSSAADLHKHWLEFENNVRDLYPLQYTDVEKYETPIFYESKNDNPNFDTL 119
Query: 139 MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
A + K S ++++ ++
Sbjct: 120 NDNATGLDGALDTLEKAKETKAKTSEVLDKAVDNY 154
>gi|156120863|ref|NP_001095578.1| tetratricopeptide repeat protein 21B [Bos taurus]
gi|154425629|gb|AAI51354.1| TTC21B protein [Bos taurus]
Length = 1316
Score = 35.5 bits (79), Expect = 8.7, Method: Composition-based stats.
Identities = 22/211 (10%), Positives = 60/211 (28%), Gaps = 3/211 (1%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
E A + ++N+ KA +++ + L +Q + +L +
Sbjct: 889 EIAKHSVAQRNYEKAIKFYREALVHCETDNKIMLELARLYLLQDDPDACLRHCALLLQSD 948
Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
+ + Y Q + + +SR+++ ++ +
Sbjct: 949 QDNEAATMMMADLMFRKQDYEQAVFHLQQLLERKPDNYMTLSRLIDFLRRCGKLEDVPRF 1008
Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYV---AAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
+ + + ++E G Y K + D++ + A+ ++E +
Sbjct: 1009 FLMAEKRNSRAKLEPGFQYCKGLYLWYTGEPNDALRHFNKARKDSDWGQNALYNMIEICL 1068
Query: 239 ALALMDEAREVVSLIQERYPQGYWARYVETL 269
EV + + L
Sbjct: 1069 NPDNETVGGEVFENLDADLGNSTEKQESVQL 1099
>gi|153810402|ref|ZP_01963070.1| hypothetical protein RUMOBE_00783 [Ruminococcus obeum ATCC 29174]
gi|149833581|gb|EDM88662.1| hypothetical protein RUMOBE_00783 [Ruminococcus obeum ATCC 29174]
Length = 169
Score = 35.5 bits (79), Expect = 8.7, Method: Composition-based stats.
Identities = 10/84 (11%), Positives = 23/84 (27%), Gaps = 1/84 (1%)
Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQ-REVYEKAVLFLKEQNFSKA 76
K I F + V + + + Q +E Y++A + + A
Sbjct: 1 MKKKIIAVIAFVLVVTGVPFCAIKGDEAARARAKEAAESQNKEWYKEANACIDAGEYEDA 60
Query: 77 YEYFNQCSRDFPFAGVARKSLLMS 100
+ + D+ +
Sbjct: 61 IKLLEKLPTDYEDSRYIIPYAEYC 84
>gi|228472629|ref|ZP_04057389.1| tetratricopeptide repeat domain protein [Capnocytophaga gingivalis
ATCC 33624]
gi|228276042|gb|EEK14798.1| tetratricopeptide repeat domain protein [Capnocytophaga gingivalis
ATCC 33624]
Length = 918
Score = 35.5 bits (79), Expect = 8.8, Method: Composition-based stats.
Identities = 25/244 (10%), Positives = 59/244 (24%), Gaps = 11/244 (4%)
Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
++ K + + +V +D + D ++ YE+A L +
Sbjct: 2 KMTKIYSVLLLLLPCISVVA------QDKKELKLIDSYFKEGQYEEAKKLLDKN-----I 50
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
+ + + G + +Y + + Y
Sbjct: 51 TQYPKNGDIQFYMGTYYYQKQDNDKARYHLLRALDELPNHVAAKEILASIETTQKHYSSA 110
Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
+++ PYD + + + +K R +
Sbjct: 111 ICYVNELLETRPYDAELWRKKIALYRLQGNDIEANRLLKRIRVIYPQDEQFKKDYLYSLQ 170
Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
+ + ++ EEA L Y+ D+A V+ +
Sbjct: 171 VQSSQEKKKGNIEEAIKMEQETLRLNPKDEEAYLTLTNTYLLSGDKDKALTYVNRGLQNL 230
Query: 258 PQGY 261
P
Sbjct: 231 PNNQ 234
>gi|225848751|ref|YP_002728915.1| slei family protein [Sulfurihydrogenibium azorense Az-Fu1]
gi|225644694|gb|ACN99744.1| slei family protein [Sulfurihydrogenibium azorense Az-Fu1]
Length = 291
Score = 35.5 bits (79), Expect = 8.8, Method: Composition-based stats.
Identities = 23/200 (11%), Positives = 49/200 (24%), Gaps = 8/200 (4%)
Query: 60 VYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
+Y+ V +L N + A Y + V L F + E
Sbjct: 39 LYDMGVSYLSSGNNAMAISYLEKALEINKQPEVYNSLALAYQFAGEYEKALKTFKEGLER 98
Query: 120 YITQYPESKNV----DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
Y N + ++ + I
Sbjct: 99 YPNSPELLTNYGILLAVLKKYNEAITYLEKAVNHPTYPKKEIAFYNLGLIYRELGKEDKF 158
Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD----AEHAEEAMA 231
+ + + +G YY +R + + ++ Y+ + +
Sbjct: 159 IDYVNKAIMYNSNYLNAYLTLGDYYYERYKKYKNLLDLKISRDYYAKALQLSINDPIIFY 218
Query: 232 RLVEAYVALALMDEAREVVS 251
+L Y L +D A+ +
Sbjct: 219 KLGLVYKNLNQVDLAKFYLE 238
>gi|224532851|ref|ZP_03673466.1| hypothetical protein BBUWI9123_0229 [Borrelia burgdorferi WI91-23]
gi|224512240|gb|EEF82626.1| hypothetical protein BBUWI9123_0229 [Borrelia burgdorferi WI91-23]
Length = 791
Score = 35.5 bits (79), Expect = 8.8, Method: Composition-based stats.
Identities = 23/219 (10%), Positives = 60/219 (27%)
Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
+ + Y + Q + Y+ ++ K + + + E F+Q + P A + ++
Sbjct: 432 KAENAYEKIIKLTNTQEDHYKLGIIRFKLKKYEHSIESFDQTIKLDPKHKKALHNKGIAL 491
Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
+ K ++ + Y + + Q K
Sbjct: 492 MMLNKNKKAIESFEKAIQIDKNYGTAYYQKGIAEEKNGDMQQAFASFKNAYNLDKNPNYA 551
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
+ + + + + N E+ I + + E + +
Sbjct: 552 LKAGIVSNNLGNFKQSEEYLNFFNANAKKPNEIAIYNLSIAKFENNKLEESLETINKAID 611
Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
E + + A + SL+ E+ P+
Sbjct: 612 LNPEKIEYLYLKASINLKKENYQNAISLYSLVIEKNPEN 650
>gi|17230385|ref|NP_486933.1| hypothetical protein all2893 [Nostoc sp. PCC 7120]
gi|17131987|dbj|BAB74592.1| all2893 [Nostoc sp. PCC 7120]
Length = 268
Score = 35.5 bits (79), Expect = 8.8, Method: Composition-based stats.
Identities = 31/239 (12%), Positives = 59/239 (24%), Gaps = 36/239 (15%)
Query: 23 ALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQ--REVYEKAVLFLKEQNFSKAYEYF 80
I +++ L GW +T + + E +A + +F A +Y+
Sbjct: 2 IKLISVVLSLLVLFGWVTPVMAQSQQPWITQEQIEQGEEWKNQAFTATNKGDFVTAEKYW 61
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
+ +FP A + + + + + N
Sbjct: 62 TRIIDNFPTNAGAWSNRGN--------------SRVSQNKLQAALTDFNKAIELAPNVTD 107
Query: 141 YAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
+ + ++E N A G
Sbjct: 108 PYLNRGTALEGLGKWSEAIADYNHVLELDPN-----------------DAMAYNNRGNAK 150
Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ 259
G++ AI +Q + A A A DEA + I +YP
Sbjct: 151 AGLGQWSEAIADYQKSFEIAPNFAF---ARANYAIALYETGQKDEAIREMRNIVRKYPN 206
>gi|120598176|ref|YP_962750.1| type IV pilus biogenesis/stability protein PilW [Shewanella sp.
W3-18-1]
gi|146293750|ref|YP_001184174.1| type IV pilus biogenesis/stability protein PilW [Shewanella
putrefaciens CN-32]
gi|120558269|gb|ABM24196.1| type IV pilus biogenesis/stability protein PilW [Shewanella sp.
W3-18-1]
gi|145565440|gb|ABP76375.1| type IV pilus biogenesis/stability protein PilW [Shewanella
putrefaciens CN-32]
gi|319427124|gb|ADV55198.1| outer membrane PilQ pilotin, PilF [Shewanella putrefaciens 200]
Length = 262
Score = 35.5 bits (79), Expect = 8.8, Method: Composition-based stats.
Identities = 32/248 (12%), Positives = 72/248 (29%), Gaps = 4/248 (1%)
Query: 22 FALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVR--YQREVYEKAVLFLKEQNFSKAYEY 79
F+L I S+ + V + D+ + R RE + + +L N +A
Sbjct: 8 FSLAITLSLVMTGCVTERTYTGTDIPVSERKLDRVAAARERMQLGLTYLNRGNSEQAKYN 67
Query: 80 FNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD--YVYYLV 137
++ P ++ + +QA +S N ++
Sbjct: 68 LDKAIEYAPELEDVHVAMAYYYQTVGDLVRTEQAYQKAISTKDASGDSMNNFGVFLCQQK 127
Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
A+ + + + S + AR Y + + V +
Sbjct: 128 QYEKAEKMFLAAIEMPKYTRTASSYENLGLCSRESGKAEKARQYFQMALKYDPRRSVSLL 187
Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
E I + + A E++A ++ A+ ++ L+ ++
Sbjct: 188 ELAELETEQGDFIQARNQLARYHQVAAQTPESLALGIKIEQAMNDDAAVKKFGILLLAKF 247
Query: 258 PQGYWARY 265
P A+
Sbjct: 248 PASPQAKQ 255
>gi|325473812|gb|EGC77000.1| TPR domain-containing protein [Treponema denticola F0402]
Length = 658
Score = 35.5 bits (79), Expect = 8.8, Method: Composition-based stats.
Identities = 25/250 (10%), Positives = 60/250 (24%), Gaps = 31/250 (12%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K F + ++Y+K + +++ A E
Sbjct: 1 MKKPFFGFMFIALFSASLFCN-----------------PADLYQKGSEYQANEDWYGAIE 43
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL-- 136
+ ++ P + + L + + +Y P+ +N+ +
Sbjct: 44 MYQSALKENPSYNLVYQGLAECFYALDEYDQALSFVESARKYKKDDPDLQNLHGFILVGL 103
Query: 137 -VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
+ + V ++ I + + +
Sbjct: 104 GKIDAAKTLFNGVLKKYPNNPEARFGLAEIEVSQGKLYLASEMYKQNLQRQGENRKALLS 163
Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL-----------VEAYVALALMD 244
+ + G A L + D A L Y AL L +
Sbjct: 164 LALVSYEAGNVKQAEDYINRALKYHGDNPQVHYFAAYLNSLDGKLEEAEGRIYSALKLKE 223
Query: 245 EAREVVSLIQ 254
+ E +L+
Sbjct: 224 DYDEAYALLA 233
>gi|296490571|gb|DAA32684.1| tetratricopeptide repeat domain 21B [Bos taurus]
Length = 1316
Score = 35.5 bits (79), Expect = 8.8, Method: Composition-based stats.
Identities = 22/211 (10%), Positives = 60/211 (28%), Gaps = 3/211 (1%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYI 121
E A + ++N+ KA +++ + L +Q + +L +
Sbjct: 889 EIAKHSVAQRNYEKAIKFYREALVHCETDNKIMLELARLYLLQDDPDACLRHCALLLQSD 948
Query: 122 TQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFY 181
+ + Y Q + + +SR+++ ++ +
Sbjct: 949 QDNEAATMMMADLMFRKQDYEQAVFHLQQLLERKPDNYMTLSRLIDFLRRCGKLEDVPRF 1008
Query: 182 VTVGRNQLAAKEVEIGRYYLKRGEYV---AAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
+ + + ++E G Y K + D++ + A+ ++E +
Sbjct: 1009 FLMAEKRNSRAKLEPGFQYCKGLYLWYTGEPNDALRHFNKARKDSDWGQNALYNMIEICL 1068
Query: 239 ALALMDEAREVVSLIQERYPQGYWARYVETL 269
EV + + L
Sbjct: 1069 NPDNETVGGEVFENLDADLGNSTEKQESVQL 1099
>gi|213407466|ref|XP_002174504.1| anaphase-promoting complex subunit 8 [Schizosaccharomyces japonicus
yFS275]
gi|212002551|gb|EEB08211.1| anaphase-promoting complex subunit 8 [Schizosaccharomyces japonicus
yFS275]
Length = 563
Score = 35.5 bits (79), Expect = 8.8, Method: Composition-based stats.
Identities = 33/229 (14%), Positives = 67/229 (29%), Gaps = 6/229 (2%)
Query: 26 IFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSR 85
IFF A L + ++A+L ++F +A E F +
Sbjct: 233 IFFVFASHELHQVNSVVYEQLEEAERVFPSSVYLTTQRALLAYDARDFDEAEEMFEDILK 292
Query: 86 DFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMI 145
+ P+ + FV K A + PE+ ++ YY + + +
Sbjct: 293 NDPYRLDDMDTYSNILFVMERKSKLGFLAQVSSAVDRFRPETCSIIGNYYSLLSEHENAV 352
Query: 146 RDVPYDQRATKLMLQYMSRI---VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLK 202
+ + L + + N+ A + + +G+ Y
Sbjct: 353 TYFRRALQLNRNYLAAWTLMGHEYVELKNTHAAIEAYRHAVDVNRKDYRAWYGLGQTYEV 412
Query: 203 RGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
+ A+ FQ A + +A+ Y + EA +
Sbjct: 413 LDMHFYALYYFQRATALRPYDQRMWQAL---GNCYEKIQRPQEAIKSYK 458
>gi|149280086|ref|ZP_01886210.1| hypothetical protein PBAL39_10875 [Pedobacter sp. BAL39]
gi|149229100|gb|EDM34495.1| hypothetical protein PBAL39_10875 [Pedobacter sp. BAL39]
Length = 488
Score = 35.5 bits (79), Expect = 8.8, Method: Composition-based stats.
Identities = 8/50 (16%), Positives = 14/50 (28%), Gaps = 3/50 (6%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFL 68
+ K + + IA FL + D V ++ A
Sbjct: 1 MKKIYIVL---IAAVFLSSCAKNLEEYNIDDKKATVVPAATLFSAAQKSF 47
>gi|78223878|ref|YP_385625.1| TPR repeat-containing protein [Geobacter metallireducens GS-15]
gi|78195133|gb|ABB32900.1| TPR repeat protein [Geobacter metallireducens GS-15]
Length = 247
Score = 35.5 bits (79), Expect = 8.8, Method: Composition-based stats.
Identities = 31/256 (12%), Positives = 65/256 (25%), Gaps = 17/256 (6%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
L + +A+ L + + ++ + +L E + ++A
Sbjct: 1 MKRLLVLIVMALFSLTACA---------VTDASRKQASYHFQMGLSYLGENDATRALIEL 51
Query: 81 NQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMS 140
+ + P SL ++ F + + E Y E++N V YL
Sbjct: 52 AEAEKLTPDDPALLNSLGLAYFYKKRYDLAELKYRRAIELKPDYSEARNNLGVNYLEMQR 111
Query: 141 YAQMIRDV-----PYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
+ + + + + P Q V
Sbjct: 112 WDDAVAQFTLVLADLFFINHEDARINLGLAYLGKGDYPKSLDILRQAVATSPQNIVARVG 171
Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
+GR Y AI F + + + L A++ A +
Sbjct: 172 LGRVYFAMDRNDLAIQEFTKAVELNKNY---QNGYYYLALAHLKGKDYVSAADAFREAIR 228
Query: 256 RYPQGYWARYVETLVK 271
P R ++
Sbjct: 229 IAPDSEKGRLSREYLE 244
>gi|331239275|ref|XP_003332291.1| anaphase-promoting complex subunit CDC23 [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
gi|309311281|gb|EFP87872.1| anaphase-promoting complex subunit CDC23 [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
Length = 537
Score = 35.5 bits (79), Expect = 8.9, Method: Composition-based stats.
Identities = 23/239 (9%), Positives = 55/239 (23%), Gaps = 9/239 (3%)
Query: 27 FFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVY---EKAVLFLKEQNFSKAYEYFNQC 83
FF + + + ++ ++A++ ++F A F+
Sbjct: 184 FFFVHATLETHTTGNGDTLTKVVEELRELFPSSLFLKSQQALIAYHVRDFDTAETIFDSI 243
Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
+ + +V K A + + V L+G ++
Sbjct: 244 YEADTYRVEDVDTYSNILYVMDKRAKLTSLAQHYAGGVESAGGDRMRPEVCCLLGNYWSL 303
Query: 144 MIRDVPYDQRATKLMLQYMSRI--VERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYL 201
+ + + + + + + R +
Sbjct: 304 SGEHEKAIIEFKRALRLDPGYLSAWTLMGHEYVEMKNTYAAIESYRRAIDANSKDYRAWY 363
Query: 202 KRGEYVAAIPRFQLVLANYSDA----EHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
G+ + L Y A + L + Y L EAR
Sbjct: 364 GLGQTYEVLDMLSYSLYYYQQATALKPYDTRMWLALAQVYEKLGRRREARMTTKRALMN 422
>gi|283955280|ref|ZP_06372780.1| LOW QUALITY PROTEIN: hypothetical protein C414_000440063
[Campylobacter jejuni subsp. jejuni 414]
gi|283793194|gb|EFC31963.1| LOW QUALITY PROTEIN: hypothetical protein C414_000440063
[Campylobacter jejuni subsp. jejuni 414]
Length = 309
Score = 35.5 bits (79), Expect = 8.9, Method: Composition-based stats.
Identities = 10/87 (11%), Positives = 29/87 (33%)
Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
++ + + A +G K+ +Y AI ++ + + ++ + + +
Sbjct: 219 NFLITKQYKPARANFWLGEIEYKQKKYNNAIVYYKKSSSLSTKGDYFPKLLYHTAISLDK 278
Query: 240 LALMDEAREVVSLIQERYPQGYWARYV 266
A ++ YP A+
Sbjct: 279 TGDTKAANGFYKALKTNYPNSPEAKAS 305
>gi|209695367|ref|YP_002263296.1| hypothetical protein VSAL_I1900 [Aliivibrio salmonicida LFI1238]
gi|208009319|emb|CAQ79585.1| putative exported protein [Aliivibrio salmonicida LFI1238]
Length = 254
Score = 35.5 bits (79), Expect = 8.9, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 31/79 (39%), Gaps = 3/79 (3%)
Query: 193 EVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSL 252
LK+ +Y A FQ +A Y D+ ++ A L + Y A EA + +
Sbjct: 139 YQNAVDLILKKKDYAGATKAFQEFVAAYPDSVYSSNAHYWLGQLYFAQKNDVEAAKSFTK 198
Query: 253 IQERYPQGYWARYVETLVK 271
+ Y + + L+K
Sbjct: 199 VVS-YADSN--KRADALLK 214
>gi|218778927|ref|YP_002430245.1| hypothetical protein Dalk_1074 [Desulfatibacillum alkenivorans
AK-01]
gi|218760311|gb|ACL02777.1| Tetratricopeptide TPR_2 repeat protein [Desulfatibacillum
alkenivorans AK-01]
Length = 647
Score = 35.5 bits (79), Expect = 8.9, Method: Composition-based stats.
Identities = 16/208 (7%), Positives = 55/208 (26%), Gaps = 14/208 (6%)
Query: 62 EKAVLFLKEQNFSKAYEYFNQCSRDFPF--AGVARKSLLMSAFVQYSAGKYQQAASLGEE 119
E+A+ ++ + ++KA + + + + + K +
Sbjct: 40 EQALNYMAQGKYAKAEPLLLKDLKIKEEALGKIHPGVGEICNNIGRLYRKQGKYQEAESF 99
Query: 120 YITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
Y+ ++ + + + + + R +E + +
Sbjct: 100 YLRALEITEKNLGDAHPQAAALCNNLAVLYHALGKYAQAEPLFMRALEIREKAL-GEDHP 158
Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
N + + + A + ++ D ++ L Y +
Sbjct: 159 DVAQTCSNLALLYQDQDKYSQAEHLIKRALKIEVNALGEDHPDTAAVYNILSGL---YSS 215
Query: 240 LALMDEAREV--------VSLIQERYPQ 259
D+A + ++ + +P
Sbjct: 216 QGKYDQAEPLQLRVLKIREKVLGKNHPD 243
>gi|254495292|ref|ZP_05108216.1| conserved hypothetical protein [Polaribacter sp. MED152]
gi|85819646|gb|EAQ40803.1| conserved hypothetical protein [Polaribacter sp. MED152]
Length = 1011
Score = 35.5 bits (79), Expect = 8.9, Method: Composition-based stats.
Identities = 23/231 (9%), Positives = 52/231 (22%), Gaps = 16/231 (6%)
Query: 52 TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQ 111
T ++ Y +A + +N+ +A F + A LL
Sbjct: 460 TIEISRKAKYWEAETLYRLENYEEALSKFIALNNSLRSANNKDFPLLEYNIAYCHFKLKD 519
Query: 112 QAASLGEEYITQYPESKNVD-------------YVYYLVGMSYAQMIRDVPYDQRATKLM 158
+ + + + + + V
Sbjct: 520 YEKAALTFNQFSGKGNIDQNIKDDSFLRLGDSYFAIRNYEKAIRAYKVIVDNSGLDADYA 579
Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE---VEIGRYYLKRGEYVAAIPRFQL 215
+ + A V + K+ ++ Y K ++ A +
Sbjct: 580 MYQTGMSYGFQNKNEAKVNALTKVINNYQISSLKDDALFQLAATYTKLKDFEKAHQAYTR 639
Query: 216 VLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYV 266
+ + + A+ R Y A + + YP A
Sbjct: 640 LQEKHVKSVFIPTALVREGLLYYNQNKNSLALNNFKKVAQTYPNSSEALEA 690
>gi|320353060|ref|YP_004194399.1| TPR repeat-containing protein [Desulfobulbus propionicus DSM 2032]
gi|320121562|gb|ADW17108.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfobulbus
propionicus DSM 2032]
Length = 711
Score = 35.2 bits (78), Expect = 9.0, Method: Composition-based stats.
Identities = 22/221 (9%), Positives = 51/221 (23%), Gaps = 2/221 (0%)
Query: 31 AVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFA 90
G ++ + + +A++ +E+N+++A + Q
Sbjct: 117 ISLAATGKNAEAREQLNAAKRLGPDTLFTLAAEAIILQREKNYTEAIKKCEQAIALNATH 176
Query: 91 GVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPY 150
R L K E + + Y + I
Sbjct: 177 PYPRNILGRVYADMGHHAKALDCFQKAVELKVDFLLGYINLGAVSYLTGDYERSIASFSK 236
Query: 151 DQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAI 210
+ + Y K A + + + +
Sbjct: 237 AIELNRNAYAAHYGLGVVYETLGKNKEAMQALQKSLELRPGNASALETLGKLQLKEGLIE 296
Query: 211 PRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
Q +++ + A L +A + DEA +
Sbjct: 297 AALQTGNEM--ASKNMDGAFVLLGDALLQAGKTDEAIASLK 335
>gi|317505438|ref|ZP_07963357.1| conserved hypothetical protein [Prevotella salivae DSM 15606]
gi|315663452|gb|EFV03200.1| conserved hypothetical protein [Prevotella salivae DSM 15606]
Length = 642
Score = 35.2 bits (78), Expect = 9.0, Method: Composition-based stats.
Identities = 21/217 (9%), Positives = 47/217 (21%), Gaps = 17/217 (7%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQ---NFSK 75
+ K + L D + + EVY + + + +
Sbjct: 1 MKKIYKLFLLFGILFCLTACS----ESFLDKEKDDKKSEEEVYSR-YEEVNKNVATAYWN 55
Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
A F+ S+ V+ + G + + +Y
Sbjct: 56 ARYAMRPLVWLEHFSSSVITDECESSNVEGNIGNRYNQGDWSPNSDFPGNNRQFWNSMYS 115
Query: 136 LVGMSYAQMIRDVPYDQRAT---------KLMLQYMSRIVERYTNSPYVKGARFYVTVGR 186
+ + Y ++ Y R Y +
Sbjct: 116 AIRHINLTLEGIEKYKTPDNPLSPGDLERRIGELYFLRGYMHYRLMMLYGEIPYIDHSIA 175
Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
A K + + A ++ V Y+ +
Sbjct: 176 TNDAMKFERESIHAVVDKIVADAETAYKKVAEMYNRS 212
>gi|229544008|ref|ZP_04433067.1| Tetratricopeptide TPR_2 repeat protein [Bacillus coagulans 36D1]
gi|229325147|gb|EEN90823.1| Tetratricopeptide TPR_2 repeat protein [Bacillus coagulans 36D1]
Length = 421
Score = 35.2 bits (78), Expect = 9.0, Method: Composition-based stats.
Identities = 25/219 (11%), Positives = 54/219 (24%), Gaps = 9/219 (4%)
Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
++ A+ + + KA E F + P L + + + AA
Sbjct: 203 EANTLFGYALTAYQAGFYEKAIELFEELRETDPGYHPLYLYLGRAYEHEQMPEEALAAAE 262
Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYD---QRATKLMLQYMSRIVERYTNS 172
G + E + + + ++ +
Sbjct: 263 KGIKEDEYDKELYHFAGKMATKAGDEEKAENYFKKALELDPGYLDAALSYNELLLQKERY 322
Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS-DAEHAEEAMA 231
V+ + + ++ EY A+ + + D E+
Sbjct: 323 EEVRDRALSMEKEGDTDPRLYWDLAISLKHLEEYSQALKYYGYAYNDLQNDTVFLEDYGY 382
Query: 232 RLVEAYVALALMDEAREVVSLIQERYP-QGYWARYVETL 269
L+E EA + + P W +E L
Sbjct: 383 FLIE----EGRRKEAYGIFQKLLREDPANDEWIALLERL 417
>gi|85859401|ref|YP_461603.1| protein ERFK [Syntrophus aciditrophicus SB]
gi|85722492|gb|ABC77435.1| protein ERFK [Syntrophus aciditrophicus SB]
Length = 314
Score = 35.2 bits (78), Expect = 9.0, Method: Composition-based stats.
Identities = 10/90 (11%), Positives = 33/90 (36%), Gaps = 6/90 (6%)
Query: 185 GRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAY----VAL 240
+ +A Y +G Y+A++ +++ ++ Y + + + Y
Sbjct: 29 CSHYMARPSFGEANEYFSQGNYIASLSKYEQIMKKYP--AAGDRVLFEMGIIYAYPGNEQ 86
Query: 241 ALMDEAREVVSLIQERYPQGYWARYVETLV 270
++ E + + YP+ + + ++
Sbjct: 87 KDYQKSLECFQKLLKDYPESRYRQDSVEMI 116
>gi|126175194|ref|YP_001051343.1| type IV pilus biogenesis/stability protein PilW [Shewanella baltica
OS155]
gi|153001520|ref|YP_001367201.1| type IV pilus biogenesis/stability protein PilW [Shewanella baltica
OS185]
gi|160876256|ref|YP_001555572.1| type IV pilus biogenesis/stability protein PilW [Shewanella baltica
OS195]
gi|304410037|ref|ZP_07391656.1| type IV pilus biogenesis/stability protein PilW [Shewanella baltica
OS183]
gi|307302250|ref|ZP_07582008.1| type IV pilus biogenesis/stability protein PilW [Shewanella baltica
BA175]
gi|125998399|gb|ABN62474.1| type IV pilus biogenesis/stability protein PilW [Shewanella baltica
OS155]
gi|151366138|gb|ABS09138.1| type IV pilus biogenesis/stability protein PilW [Shewanella baltica
OS185]
gi|160861778|gb|ABX50312.1| type IV pilus biogenesis/stability protein PilW [Shewanella baltica
OS195]
gi|304351446|gb|EFM15845.1| type IV pilus biogenesis/stability protein PilW [Shewanella baltica
OS183]
gi|306914288|gb|EFN44709.1| type IV pilus biogenesis/stability protein PilW [Shewanella baltica
BA175]
gi|315268445|gb|ADT95298.1| type IV pilus biogenesis/stability protein PilW [Shewanella baltica
OS678]
Length = 262
Score = 35.2 bits (78), Expect = 9.0, Method: Composition-based stats.
Identities = 28/249 (11%), Positives = 73/249 (29%), Gaps = 4/249 (1%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVR--YQREVYEKAVLFLKEQNFSKAYE 78
+F+L + S+ + V + D+ + + RE + + +L N +A
Sbjct: 7 RFSLILTLSLLMTGCVTERTYTGTDIPVSERKLDKVAAARERLQLGLTYLNRGNSEQAKY 66
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVD--YVYYL 136
++ P +L + +++ +S N ++
Sbjct: 67 NLDKALEYAPELEDVHTALAYYYQTVGDLVRTEESYMNAISTKDASGDSMNNFGVFLCQQ 126
Query: 137 VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEI 196
A+ + + + + + AR Y + + V +
Sbjct: 127 KQYDKAEKMFLAAIEMPKYTRTASSYENLGLCSREAGQAEKARQYFQMALKYDPRRSVSL 186
Query: 197 GRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQER 256
+ I + + AE E++A ++ A+ + L+ +
Sbjct: 187 LEMAELEVDQGDFIQARNQLARYHQVAEQTPESLALGIKIEQAVNDDAAVKRFGILLLAK 246
Query: 257 YPQGYWARY 265
+P A+
Sbjct: 247 FPASPQAKQ 255
>gi|332304873|ref|YP_004432724.1| PEP-CTERM system TPR-repeat lipoprotein [Glaciecola agarilytica
4H-3-7+YE-5]
gi|332172202|gb|AEE21456.1| PEP-CTERM system TPR-repeat lipoprotein [Glaciecola agarilytica
4H-3-7+YE-5]
Length = 916
Score = 35.2 bits (78), Expect = 9.1, Method: Composition-based stats.
Identities = 27/246 (10%), Positives = 67/246 (27%), Gaps = 21/246 (8%)
Query: 16 AYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSK 75
+++ K ++++ L+ +Q+S + + A F+ + + +
Sbjct: 1 MHKMKKT----IIALSLGMLISCGQQTSEEHI--------------QAAQKFIAQNDNAS 42
Query: 76 AYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYY 135
A + P + AR L + ++ S EY + + Y
Sbjct: 43 AIISLKTAVQLAPKSPEARFELGKVYIEEKQFESAEKELSRALEYGYDGAKVLPLLTRAY 102
Query: 136 LVGMSY--AQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
+Y + D + + ++V AR +
Sbjct: 103 QRTGAYAAISEMEDTNVNLSNEEKAEIGFFKVVSLVR-LNKPDDARAIIADQGQLETDSV 161
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLI 253
+ A Q + ++ E + + +++L A +
Sbjct: 162 FKSLSQVYSDILDKAYPLALQNITQLKAEHPDHPEVLKLAAQLHLSLQDPKAAAQEFDHY 221
Query: 254 QERYPQ 259
YP
Sbjct: 222 VSLYPD 227
>gi|315453239|ref|YP_004073509.1| paralysed flagellum protein, PflA [Helicobacter felis ATCC 49179]
gi|315132291|emb|CBY82919.1| paralysed flagellum protein, PflA [Helicobacter felis ATCC 49179]
Length = 790
Score = 35.2 bits (78), Expect = 9.1, Method: Composition-based stats.
Identities = 9/84 (10%), Positives = 20/84 (23%)
Query: 187 NQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA 246
+ E+ + + L Y + AY + +A
Sbjct: 215 FRKDLYLYEMIALDKLNKRQDLLLQIGERWLKLYPADPKVPHVLYLTGTAYDRINHAKQA 274
Query: 247 REVVSLIQERYPQGYWARYVETLV 270
+ YP +A + +
Sbjct: 275 QNQFQRAIIEYPGSRYAPLSQMRL 298
>gi|306828815|ref|ZP_07462007.1| Fe3+ ABC superfamily ATP binding cassette transporter, binding
protein [Streptococcus mitis ATCC 6249]
gi|304428993|gb|EFM32081.1| Fe3+ ABC superfamily ATP binding cassette transporter, binding
protein [Streptococcus mitis ATCC 6249]
Length = 360
Score = 35.2 bits (78), Expect = 9.1, Method: Composition-based stats.
Identities = 10/68 (14%), Positives = 24/68 (35%), Gaps = 6/68 (8%)
Query: 10 CIFEAWAYQLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVR------YQREVYEK 63
+F + K + FS L G + + +++ TD ++ E+
Sbjct: 6 IMFVKRRKNMKKKLSLLSFSWIFLLLSGCSSTTEAETSIENDTDKTLVVYSPNPEDLIEE 65
Query: 64 AVLFLKEQ 71
+ +E+
Sbjct: 66 TIPAFEEK 73
>gi|254491164|ref|ZP_05104345.1| tetratricopeptide repeat domain protein [Methylophaga thiooxidans
DMS010]
gi|224463677|gb|EEF79945.1| tetratricopeptide repeat domain protein [Methylophaga thiooxydans
DMS010]
Length = 596
Score = 35.2 bits (78), Expect = 9.1, Method: Composition-based stats.
Identities = 23/201 (11%), Positives = 51/201 (25%), Gaps = 8/201 (3%)
Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLM----SAFVQYSAGKYQ 111
Q+ Y + N A +F A+ + + + +
Sbjct: 345 TQQATYFMGLSEQMNGNLDAALVWFASVPVHSNRFDNAQNNYINILLERGELDKARAHLA 404
Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
E QY + ++ D ++ + + I E
Sbjct: 405 AMRQDLPEQALQYYLFEASILREADQSQDAFDLLTDAMGQYPQSEELRYSRAMIAESINK 464
Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRY-YLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
++ ++ A +G + + A+ Q L +
Sbjct: 465 LDVLEKDLRWILEKDPNNAQALNALGYTLTDRTDRHQEALVMIQKALEIKPGDPFY---L 521
Query: 231 ARLVEAYVALALMDEAREVVS 251
L AY L +D+A + +
Sbjct: 522 DSLGWAYYRLGELDKAEKYLR 542
>gi|196014187|ref|XP_002116953.1| hypothetical protein TRIADDRAFT_61020 [Trichoplax adhaerens]
gi|190580444|gb|EDV20527.1| hypothetical protein TRIADDRAFT_61020 [Trichoplax adhaerens]
Length = 1314
Score = 35.2 bits (78), Expect = 9.1, Method: Composition-based stats.
Identities = 18/193 (9%), Positives = 57/193 (29%), Gaps = 6/193 (3%)
Query: 59 EVY-EKAVLFLKEQNFSKAYEYFNQCSRDFP--FAGVARKSLLMSAFVQYSAGKYQQAAS 115
++Y + + +A +C + + + + + ++
Sbjct: 250 QLYRNIGLAKFDNGDHGEALSSHQKCLEICINIYGEEHPNVAMSYSSLASIYYQQEEYQQ 309
Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
+ + + V + + I ++ Y+Q L+ +
Sbjct: 310 AYDMFRKSLDINLKVLGSNHWIIADTYHNIGNIHYNQEKCSDALKMYQVAMFMRLKQTRN 369
Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
R + +A + +Y+ ++ ++ FQ + Y ++ ++ E
Sbjct: 370 DHIRHRIADSYFVVANVYAKQSKYHDALEMFLKSVSIFQNL---YGESNIVAIIYQKIAE 426
Query: 236 AYVALALMDEARE 248
Y D+A +
Sbjct: 427 LYDRDGRADDAND 439
>gi|149720457|ref|XP_001495569.1| PREDICTED: similar to Tetratricopeptide repeat protein 28 (TPR
repeat protein 28) [Equus caballus]
Length = 2490
Score = 35.2 bits (78), Expect = 9.1, Method: Composition-based stats.
Identities = 25/203 (12%), Positives = 56/203 (27%), Gaps = 12/203 (5%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
S ++ RE+ +++ +F A + Q + + K A+ +
Sbjct: 356 SKDELSEARELGNMGAVYIAMGDFENAVQCHEQHLKIAK--DLGNKREEARAYSNLGSAY 413
Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
+ + Y + + + M + + + QY + +
Sbjct: 414 HYRRNFDKAMSYHNYVLELAQELMEKAIEMRAYAGLGHAARCMQDLERAKQYHEQQLGIA 473
Query: 170 TN-SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
+ R +G + + K +A SD
Sbjct: 474 EDLKDRAAEGRASSNLGIIHQMKGDYDTALKLHKTHLCIAQEL---------SDYAAQGR 524
Query: 229 AMARLVEAYVALALMDEAREVVS 251
A + AY AL + D+A +
Sbjct: 525 AYGNMGNAYNALGMYDQAVKYHR 547
>gi|153815963|ref|ZP_01968631.1| hypothetical protein RUMTOR_02208 [Ruminococcus torques ATCC 27756]
gi|145846782|gb|EDK23700.1| hypothetical protein RUMTOR_02208 [Ruminococcus torques ATCC 27756]
Length = 926
Score = 35.2 bits (78), Expect = 9.1, Method: Composition-based stats.
Identities = 29/223 (13%), Positives = 74/223 (33%), Gaps = 9/223 (4%)
Query: 40 RQSSRDVYLDSVTDVRYQREVYEK-AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
++ + ++ + + ++Y V+++ F KA + + +
Sbjct: 621 TKAQNIIDINHIKNPELTSDIYNDMGVIYINLDIFDKALANYQKAREIRESVENPDLEQI 680
Query: 99 MSAFVQY-SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
++ + + Q+ + + + E + Y ++ + + Y Q A
Sbjct: 681 AYSYHNIGTVYQRQKKYADAITWHKKALEIRQEIYPDNEPIIAASLTMIGNDYTQAAKND 740
Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
+ + E + + + + A IG ++ +GEY AI + L
Sbjct: 741 SSYHFNDAFEYFAKGL--EIRKLTLGETHPDTAWSYQSIGLWHFYQGEYEEAIENYLKCL 798
Query: 218 A-----NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
+ + E L EAY+ + + A+E + L
Sbjct: 799 SIRKTILQPSHAYTAEISYLLGEAYLKINQIHSAKEHLLLFLY 841
>gi|192361757|ref|YP_001983772.1| tetratricopeptide repeat domain-containing protein [Cellvibrio
japonicus Ueda107]
gi|190687922|gb|ACE85600.1| tetratricopeptide repeat domain protein [Cellvibrio japonicus
Ueda107]
Length = 964
Score = 35.2 bits (78), Expect = 9.1, Method: Composition-based stats.
Identities = 27/201 (13%), Positives = 60/201 (29%), Gaps = 21/201 (10%)
Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
R +Y +A L+ + A + ++ P +A K+ + K+ QA
Sbjct: 614 ERIAASIYRQAEASLEFGDKDTAISQLLRITQVTPDTDIAIKAQYDAGLYLMEQEKWSQA 673
Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
++ + +YP+ + + + Y +L + + ++
Sbjct: 674 ENVYLGFRQKYPQHSLTATLPAKMVLIYQSQ--------EKWQLAADELVVMERSSSDPE 725
Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
+ + + + + I +Y EY EA +L
Sbjct: 726 VKRQSLYMGAELYEKSGRRTQAIEQYRRYALEYPRPFAN-------------NLEAQHKL 772
Query: 234 VEAYVALALMDEAREVVSLIQ 254
E Y A D+ + I
Sbjct: 773 TELYQATGEQDKRLYWLQKII 793
>gi|225548523|ref|ZP_03769571.1| tetratricopeptide repeat domain protein [Borrelia burgdorferi 94a]
gi|225370786|gb|EEH00221.1| tetratricopeptide repeat domain protein [Borrelia burgdorferi 94a]
Length = 1065
Score = 35.2 bits (78), Expect = 9.1, Method: Composition-based stats.
Identities = 23/219 (10%), Positives = 60/219 (27%)
Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
+ + Y + Q + Y+ ++ K + + + E F+Q + P A + ++
Sbjct: 706 KAENAYEKIIKLTNTQEDHYKLGIIRFKLKKYEHSIESFDQTIKLDPKHKKALHNKGIAL 765
Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
+ K ++ + Y + + Q K
Sbjct: 766 MMLNKNKKAIESFEKAIQIDKNYGTAYYQKGIAEEKNGDMQQAFASFKNAYNLDKNPNYA 825
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
+ + + + + N E+ I + + E + +
Sbjct: 826 LKAGIVSNNLGNFKQSEEYLNFFNANAKKPNEIAIYNLSIAKFENNKLEESLETINKAID 885
Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
E + + A + SL+ E+ P+
Sbjct: 886 LNPEKSEYLYLKASINLKKENYQNAISLYSLVIEKNPEN 924
>gi|125556482|gb|EAZ02088.1| hypothetical protein OsI_24169 [Oryza sativa Indica Group]
Length = 435
Score = 35.2 bits (78), Expect = 9.1, Method: Composition-based stats.
Identities = 21/214 (9%), Positives = 57/214 (26%), Gaps = 15/214 (7%)
Query: 39 ERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
+S D+ + + ++ + A L+ + +A + + + F + + +
Sbjct: 185 SLCTSSDILNNLNLKNYWMKDFF-LASAHLELKMHEEALKRYERLMGVFRCSDYIQAQIA 243
Query: 99 MSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLM 158
+ + + + M +
Sbjct: 244 TVQYSMRDLDEADMIFEELLRT-----------DPFRVDSMDVYSNLLRAVDINPRDYRA 292
Query: 159 LQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRG-EYVAAIPRFQLVL 217
+ +I E Y + + A + + Y + + +
Sbjct: 293 WYGLGQIYEMMGMPFYAVYYFRKSSYLQPNDAQLWNAMAQCYESDQLQMIEEAIKCYERS 352
Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVS 251
AN +D E A+ +L + + L +EA
Sbjct: 353 ANNNDTEGI--ALHQLAKLHGMLGQSEEAAFYYK 384
>gi|13324588|gb|AAK18797.1|AF305605_1 LMP1 [Borrelia burgdorferi]
Length = 1065
Score = 35.2 bits (78), Expect = 9.1, Method: Composition-based stats.
Identities = 23/219 (10%), Positives = 60/219 (27%)
Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
+ + Y + Q + Y+ ++ K + + + E F+Q + P A + ++
Sbjct: 706 KAENAYEKIIKLTNTQEDHYKLGIIRFKLKKYEHSIESFDQTIKLDPKHKKALHNKGIAL 765
Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
+ K ++ + Y + + Q K
Sbjct: 766 MMLNKNKKAIESFEKAIQIDKNYGTAYYQKGIAEEKNGDMQQAFASFKNAYNLDKNPNYA 825
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
+ + + + + N E+ I + + E + +
Sbjct: 826 LKAGIVSNNLGNFKQSEEYLNFFNANAKKPNEIAIYNLSIAKFENNKLEESLETINKAID 885
Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
E + + A + SL+ E+ P+
Sbjct: 886 LNPEKSEYLYLKASINLKKENYQNAISLYSLVIEKNPEN 924
>gi|82703428|ref|YP_412994.1| lytic transglycosylase, catalytic [Nitrosospira multiformis ATCC
25196]
gi|123544004|sp|Q2Y6L9|MLTF_NITMU RecName: Full=Membrane-bound lytic murein transglycosylase F;
AltName: Full=Murein lyase F; Flags: Precursor
gi|82411493|gb|ABB75602.1| lytic transglycosylase, catalytic [Nitrosospira multiformis ATCC
25196]
Length = 478
Score = 35.2 bits (78), Expect = 9.1, Method: Composition-based stats.
Identities = 11/124 (8%), Positives = 28/124 (22%), Gaps = 6/124 (4%)
Query: 13 EAWAYQLYKFALTIFFSIAV-CFLVGWERQSSRDVYLDSVTDV-----RYQREVYEKAVL 66
++ + + + + L + + D ++ YE A
Sbjct: 5 SSYLFSMRSLSRFLIAIFGCGALLASCDSFERSVLPFDKTDELVVITVNSPDTYYENAEG 64
Query: 67 FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126
++ A E+ + F V R S ++ +
Sbjct: 65 SYAGLDYDLATEFAKELGMKVRFKTVPRLDKAWSLLEKHKGHFAAGMNISAKHSRHVAFG 124
Query: 127 SKNV 130
Sbjct: 125 PIYQ 128
>gi|42527934|ref|NP_973032.1| treponemal membrane protein, putative [Treponema denticola ATCC
35405]
gi|41818979|gb|AAS12951.1| treponemal membrane protein, putative [Treponema denticola ATCC
35405]
Length = 233
Score = 35.2 bits (78), Expect = 9.1, Method: Composition-based stats.
Identities = 12/98 (12%), Positives = 25/98 (25%), Gaps = 8/98 (8%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K + F + + L + R E A E ++ A E
Sbjct: 1 MKKLITILIFLLVLIPLFALSYDDNEYQRKS--------RAYMELATKAYDEGDYDAAIE 52
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
Y + + +L + K + +
Sbjct: 53 YSKLAESYAQQSSEFIQRMLAKTEAEQEMNKARTRFTW 90
>gi|302873598|ref|YP_003842231.1| Tetratricopeptide TPR_1 repeat-containing protein [Clostridium
cellulovorans 743B]
gi|307688221|ref|ZP_07630667.1| Tetratricopeptide TPR_1 repeat-containing protein [Clostridium
cellulovorans 743B]
gi|302576455|gb|ADL50467.1| Tetratricopeptide TPR_1 repeat-containing protein [Clostridium
cellulovorans 743B]
Length = 257
Score = 35.2 bits (78), Expect = 9.2, Method: Composition-based stats.
Identities = 28/204 (13%), Positives = 58/204 (28%), Gaps = 5/204 (2%)
Query: 58 REVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLG 117
E Y + K + ++KA E+F +C + L ++ + +
Sbjct: 4 EEYYGIGESYYKNKEYAKALEHFKKCISIDNYYFCLEYIGLCYLQLKQYEVAARIFQKIS 63
Query: 118 EEYITQYPESKNVDYVYYLVG--MSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
E+ N+ VY + + + Y+ +
Sbjct: 64 EDIPELASSRINLGRVYLYQDLLEKAFENFIKAIDMEPDNEDAYFYLGVYFGKINKYEEA 123
Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVE 235
K + + + +G Y + A+ F L Y+ EA +
Sbjct: 124 KSCYKKSLSINMEQSEAHLNLGICYYNLKFFNDALHEFHLA---YNYDNQCLEARENMGL 180
Query: 236 AYVALALMDEAREVVSLIQERYPQ 259
YV + ++A + I P
Sbjct: 181 IYVEMNDYEKALDEFLFINRMQPD 204
>gi|118443393|ref|YP_877100.1| hypothetical protein NT01CX_1003 [Clostridium novyi NT]
gi|118133849|gb|ABK60893.1| conserved protein [Clostridium novyi NT]
Length = 359
Score = 35.2 bits (78), Expect = 9.2, Method: Composition-based stats.
Identities = 15/155 (9%), Positives = 47/155 (30%)
Query: 18 QLYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAY 77
+ K+ I + + VG + +V V +++ ++ E + K + ++
Sbjct: 1 MIKKYTSYILIFLTIFMCVGCNKNQYENVKEKDVFNMKVATKIVEAYFNYTKADKYEESA 60
Query: 78 EYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
+ ++ ++ K + + + + + + + Y +
Sbjct: 61 KLLDEKAKTDTKDLKPSKLRIRGYRISEVTESGGEGDFKVDVIKSSVDKPETQVIDYRIK 120
Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
+ K Q ++I R N+
Sbjct: 121 VAKKGLDYKITEVSTSLFKEAFQKKNQIRFRKENN 155
>gi|42526753|ref|NP_971851.1| TPR domain-containing protein [Treponema denticola ATCC 35405]
gi|41817068|gb|AAS11762.1| TPR domain protein [Treponema denticola ATCC 35405]
Length = 658
Score = 35.2 bits (78), Expect = 9.2, Method: Composition-based stats.
Identities = 25/250 (10%), Positives = 60/250 (24%), Gaps = 31/250 (12%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K F + ++Y+K + +++ A E
Sbjct: 1 MKKPFFGFMFIALFSASLFCN-----------------PADLYQKGAEYQANEDWYGAIE 43
Query: 79 YFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYL-- 136
+ ++ P + + L + + +Y P+ +N+ +
Sbjct: 44 MYQSALKENPSYNLVYQGLAECFYALDEYDQALSFVESARKYKKDDPDLQNLHGFILVGL 103
Query: 137 -VGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE 195
+ + V ++ I + + +
Sbjct: 104 GKIDAAKTLFNGVLKKYPNNPEARFGLAEIEVSQGKLYLASEMYKQNLQRQGENRKDLLS 163
Query: 196 IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL-----------VEAYVALALMD 244
+ + G A L + D A L Y AL L +
Sbjct: 164 LALVSYEAGNVKQAEDYINRALKYHGDNPQVHYFAAYLHSLDGKLEEAEGRIYSALKLKE 223
Query: 245 EAREVVSLIQ 254
+ E +L+
Sbjct: 224 DYDEAYALLA 233
>gi|17230929|ref|NP_487477.1| hypothetical protein alr3437 [Nostoc sp. PCC 7120]
gi|17132570|dbj|BAB75136.1| alr3437 [Nostoc sp. PCC 7120]
Length = 791
Score = 35.2 bits (78), Expect = 9.2, Method: Composition-based stats.
Identities = 15/177 (8%), Positives = 36/177 (20%), Gaps = 8/177 (4%)
Query: 74 SKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
A + F Q R + S + + Y K +
Sbjct: 598 EDAAKLFQQVIYLAQNTDHHRWAEKASVCLALVNSYLGLCDAAYLLADVAYRNIKKEAII 657
Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
+ Q++ + + + + S Y++ + +
Sbjct: 658 ETGRFAYFIQILGQTYVNLGDFTKAKEMFHQALTFAEESHYMQVKAKTLNGLAEIHRQQA 717
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
E +L Y +A D +++
Sbjct: 718 DYPLALAYHTEAIELLDKIGAKCD--------LAETYFQLGLTYKKMAKSDASQKYF 766
>gi|332710918|ref|ZP_08430854.1| hypothetical protein LYNGBM3L_59420 [Lyngbya majuscula 3L]
gi|332350232|gb|EGJ29836.1| hypothetical protein LYNGBM3L_59420 [Lyngbya majuscula 3L]
Length = 481
Score = 35.2 bits (78), Expect = 9.3, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 33/82 (40%), Gaps = 3/82 (3%)
Query: 181 YVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE---AMARLVEAY 237
++ A++ V+ G + + G++ +AI +Q L Y + + L AY
Sbjct: 39 NPATAQSPDASQLVQQGVEHYQLGDFTSAIEYWQTALTTYQQTNNRPNQTIVIENLARAY 98
Query: 238 VALALMDEAREVVSLIQERYPQ 259
+ +D+A + Y Q
Sbjct: 99 QQIGQIDQAINYWEQVITNYQQ 120
>gi|326432559|gb|EGD78129.1| TPR repeat-containing protein [Salpingoeca sp. ATCC 50818]
Length = 931
Score = 35.2 bits (78), Expect = 9.3, Method: Composition-based stats.
Identities = 17/222 (7%), Positives = 55/222 (24%), Gaps = 15/222 (6%)
Query: 50 SVTDVRYQREVYEK-AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAG 108
+Y + + + + KA E++ + A + +++
Sbjct: 304 EGEKGEGVAALYNNLGLAYDNKGKYDKAIEFYEKALAITVEALGEKHPSTATSYNNLGNA 363
Query: 109 KYQQAASLGEEYITQYPESKNVDYVYYLVGMS--YAQMIRDVPYDQRATKLMLQYMSRIV 166
+ + + V+ V + + + + + + + +
Sbjct: 364 YADKGEYDRAIAYVEKALAITVETVGEKHPSTASTYGNLGNAYDSKGDHDKAVHFYEKAL 423
Query: 167 ERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHA 226
+ + N A + + + A + + + +
Sbjct: 424 AIKVETL-GEKHPSTADTYNNLGGAYDSKGDYKKAIQLYEKALAIQVETLGEKHPSTAST 482
Query: 227 EEAMARLVEAYVALALMDEARE--------VVSLIQERYPQG 260
L AY + D A + + E++P
Sbjct: 483 YN---NLGNAYASKGEYDRAVQQYEKALAIYAEALGEKHPST 521
>gi|315123119|ref|YP_004065125.1| putative lytic cell-wall binding lipoprotein [Pseudoalteromonas sp.
SM9913]
gi|315016879|gb|ADT70216.1| putative lytic cell-wall binding lipoprotein [Pseudoalteromonas sp.
SM9913]
Length = 294
Score = 35.2 bits (78), Expect = 9.3, Method: Composition-based stats.
Identities = 28/222 (12%), Positives = 59/222 (26%), Gaps = 4/222 (1%)
Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
S + V + + + R A+ +L N S+A + S P SL
Sbjct: 9 SDKPVVENKINNAGAARTRIALALQYLNTGNNSQAKYNLERASEYAPNLPEVHYSLAYY- 67
Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
+ Q A I + +Y +L + D ++
Sbjct: 68 YQQVGENALADKAYQKALAIKPDDPNTLNNYGTFLCSIDEYDRATDQFLKAIEIPSYIRV 127
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQ--LVLAN 219
+ + + L Y A ++ ++
Sbjct: 128 AQSYENLALCAIEFNDFTNAESYFQQALNHSSQRASTLISLAALYYAKSDLYKASTLIKR 187
Query: 220 YSDAEHAE-EAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
Y D A+ + +++A ++ + I + YP
Sbjct: 188 YDDTAQVSSRALLLSYLVKQRMGRIEDAEKIAATILQTYPNS 229
>gi|254498761|ref|ZP_05111476.1| hypothetical protein LDG_2846 [Legionella drancourtii LLAP12]
gi|254352030|gb|EET10850.1| hypothetical protein LDG_2846 [Legionella drancourtii LLAP12]
Length = 1196
Score = 35.2 bits (78), Expect = 9.3, Method: Composition-based stats.
Identities = 19/202 (9%), Positives = 46/202 (22%), Gaps = 10/202 (4%)
Query: 54 VRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQA 113
R++Y+KAV + +E+++ A E + + + + G + A
Sbjct: 951 PISPRKLYDKAVEYYREKDYHNALECCEKALAGYKQNKGEQSLI----------GHFYSA 1000
Query: 114 ASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSP 173
+ + ES + + Q ++ T
Sbjct: 1001 QASCYNALKLMNESLVCSEKALNYFYLLNKKTMEKLLGQAEKNYATYLSQSGMDFVTVYK 1060
Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
+ K + + + E A A
Sbjct: 1061 RAEDCFKNKDYVSTLYQMKYLIEKYPAATSEQKGSCYFMLASCYRELHQQESAIVARKEA 1120
Query: 234 VEAYVALALMDEAREVVSLIQE 255
+ + + +E
Sbjct: 1121 INLFAEAKKEQLLKNAQEKFKE 1142
>gi|195941941|ref|ZP_03087323.1| surface-located membrane protein 1 [Borrelia burgdorferi 80a]
Length = 957
Score = 35.2 bits (78), Expect = 9.3, Method: Composition-based stats.
Identities = 23/219 (10%), Positives = 60/219 (27%)
Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
+ + Y + Q + Y+ ++ K + + + E F+Q + P A + ++
Sbjct: 598 KAENAYEKIIKLTNTQEDHYKLGIIRFKLKKYEHSIESFDQTIKLDPKHKKALHNKGIAL 657
Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
+ K ++ + Y + + Q K
Sbjct: 658 MMLNKNKKAIESFEKAIQIDKNYGTAYYQKGIAEEKNGDMQQAFASFKNAYNLDKNPNYA 717
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
+ + + + + N E+ I + + E + +
Sbjct: 718 LKAGIVSNNLGNFKQSEEYLNFFNANAKKPNEIAIYNLSIAKFENNKLEESLETINKAID 777
Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
E + + A + SL+ E+ P+
Sbjct: 778 LNPEKSEYLYLKASINLKKENYQNAISLYSLVIEKNPEN 816
>gi|154489946|ref|ZP_02030207.1| hypothetical protein PARMER_00175 [Parabacteroides merdae ATCC
43184]
gi|154089388|gb|EDN88432.1| hypothetical protein PARMER_00175 [Parabacteroides merdae ATCC
43184]
Length = 1197
Score = 35.2 bits (78), Expect = 9.3, Method: Composition-based stats.
Identities = 18/144 (12%), Positives = 41/144 (28%), Gaps = 4/144 (2%)
Query: 132 YVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAA 191
+ + + + + L Y +++V + S Y ++
Sbjct: 619 FPKHSHLLESYYQVYLMALRSGNQALAAAYKNKLVTTFPESDYAVAIADPNYEYNIRMMD 678
Query: 192 KEVEIGRYYLKRGE----YVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAR 247
K + V ++ V A Y A+ + M YV + +
Sbjct: 679 KVQDSIYQATYASYLAEDTVTVRRNYRDVSAKYPLADLLPKFMFLEALTYVQAGDAEGFK 738
Query: 248 EVVSLIQERYPQGYWARYVETLVK 271
+ + E+YP ++K
Sbjct: 739 NALKALVEKYPTADVTELAGEMLK 762
>gi|91205042|ref|YP_537397.1| hypothetical protein RBE_0227 [Rickettsia bellii RML369-C]
gi|91068586|gb|ABE04308.1| unknown [Rickettsia bellii RML369-C]
Length = 250
Score = 35.2 bits (78), Expect = 9.3, Method: Composition-based stats.
Identities = 24/254 (9%), Positives = 65/254 (25%), Gaps = 20/254 (7%)
Query: 21 KFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYF 80
+ + F++ L E + + L ++ + + + E
Sbjct: 1 MKLVILIFTLLFSLLTFAESGTIKGQPLKYAASNDFESRL---DEQEQEIRRLIGKIEVL 57
Query: 81 N---QCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
++ S + + L + + +
Sbjct: 58 QHKIDILSKNSNVPQLSENTETSETDHQNTPDIFDVSLLKDLPNNVEEVKTAPEPNKDVA 117
Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
A + Y T +++Y S + A F+ G
Sbjct: 118 PDKQAYDLALASYKDNKTDDAKNKFKNFIQKYPKSSMISNAYFW--------------YG 163
Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERY 257
+ K+ +Y A + + +A+ +L + L EA ++ + + +
Sbjct: 164 ECFFKQKDYNTAAVNYLKGYKESPKGAKSSDALLKLALSLGELKKTTEACNILDKLNKEF 223
Query: 258 PQGYWARYVETLVK 271
P + + +
Sbjct: 224 PGNNRTAASKKMAE 237
>gi|116747525|ref|YP_844212.1| TPR repeat-containing protein [Syntrophobacter fumaroxidans MPOB]
gi|116696589|gb|ABK15777.1| TPR repeat-containing protein [Syntrophobacter fumaroxidans MPOB]
Length = 567
Score = 35.2 bits (78), Expect = 9.3, Method: Composition-based stats.
Identities = 25/195 (12%), Positives = 56/195 (28%), Gaps = 6/195 (3%)
Query: 67 FLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPE 126
+ +E+ + +A E F+ P VA + ++ +
Sbjct: 157 YAQEKKYDEAMEAFDHLKALLPDNPVALYYKARVFLDMKLYKQAEKIYLDVLAIEPAFEN 216
Query: 127 SK---NVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
+ Y Q + A + + R ++
Sbjct: 217 ASLDLAYVYEVTERLKDAEQTYLQILSANPANVNARTRLGNLYMRQDRPAEALRHFSHLL 276
Query: 184 VGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM 243
+ +++G +L++ +Y AI F +L + ++A+ L Y
Sbjct: 277 KLNRKDVESRLKVGIIHLQQKDYEEAIKDFTYLLKDEPQY---DQALYYLASTYAEKQDF 333
Query: 244 DEAREVVSLIQERYP 258
++A LI P
Sbjct: 334 EQAIRNFRLIARSSP 348
>gi|329960729|ref|ZP_08299053.1| conserved domain protein [Bacteroides fluxus YIT 12057]
gi|328532444|gb|EGF59242.1| conserved domain protein [Bacteroides fluxus YIT 12057]
Length = 431
Score = 35.2 bits (78), Expect = 9.4, Method: Composition-based stats.
Identities = 5/53 (9%), Positives = 11/53 (20%), Gaps = 3/53 (5%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQ 71
+ K L G + + D ++Y +
Sbjct: 1 MMKNLLIFACLFFCGLFSGCSSSPKSGLEIRKTGDG---HKLYIDGRETYIKG 50
>gi|254444909|ref|ZP_05058385.1| hypothetical protein VDG1235_3152 [Verrucomicrobiae bacterium
DG1235]
gi|198259217|gb|EDY83525.1| hypothetical protein VDG1235_3152 [Verrucomicrobiae bacterium
DG1235]
Length = 490
Score = 35.2 bits (78), Expect = 9.4, Method: Composition-based stats.
Identities = 10/48 (20%), Positives = 17/48 (35%), Gaps = 1/48 (2%)
Query: 224 EHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQ-GYWARYVETLV 270
A E RL Y+ A +++ + E YP W ++
Sbjct: 70 SLAAETCFRLASVYLEQGKKALAFKLLGDLVENYPDEAPWVAEATAIL 117
>gi|229165778|ref|ZP_04293546.1| hypothetical protein bcere0007_7550 [Bacillus cereus AH621]
gi|228617779|gb|EEK74836.1| hypothetical protein bcere0007_7550 [Bacillus cereus AH621]
Length = 179
Score = 35.2 bits (78), Expect = 9.5, Method: Composition-based stats.
Identities = 7/67 (10%), Positives = 20/67 (29%), Gaps = 1/67 (1%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYE 78
+ K + + F + LV + ++ L + + ++ + A +
Sbjct: 3 MKKLFMFLSFFVICIVLVACSGEQKTEIQLLKEMPKPKAMTI-DPSLSKKEATEIVHAAQ 61
Query: 79 YFNQCSR 85
F
Sbjct: 62 RFYAFWD 68
>gi|124514224|gb|EAY55739.1| putative TPR-domain containing protein [Leptospirillum rubarum]
Length = 254
Score = 35.2 bits (78), Expect = 9.5, Method: Composition-based stats.
Identities = 17/218 (7%), Positives = 43/218 (19%), Gaps = 4/218 (1%)
Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
E Y + L AY F + P +L + + + +
Sbjct: 35 ALEHYMSGLRNLGIGKLQDAYWDFEYAAHLDPTMKKVHYALG-HVYYRMHDFQDAKKEFR 93
Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
+ + L +V +
Sbjct: 94 LSMQGVVRVAAAYNYLGLIAYKQRQYHRAIRYFQKALSDPLYKTPEHPLVNMGRTYIALN 153
Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR---FQLVLANYSDAEHAEEAMARL 233
+ ++ ++ + + + A + L
Sbjct: 154 KPEKARETFSLAILRNSNDVAAHFWQGKLLMTTGDYKGALEEFSEVIRLAPRFPRSYYEL 213
Query: 234 VEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
Y+ L ++A + P + +K
Sbjct: 214 GRVYLKLENQNKALLAFKEVVRLDPDSPESVKARQYIK 251
>gi|73620810|sp|Q9R0T3|DNJC3_RAT RecName: Full=DnaJ homolog subfamily C member 3; AltName:
Full=Interferon-induced, double-stranded RNA-activated
protein kinase inhibitor; AltName: Full=Protein kinase
inhibitor of 58 kDa; Short=Protein kinase inhibitor p58;
Flags: Precursor
gi|149050211|gb|EDM02535.1| DnaJ (Hsp40) homolog, subfamily C, member 3, isoform CRA_a [Rattus
norvegicus]
Length = 504
Score = 35.2 bits (78), Expect = 9.5, Method: Composition-based stats.
Identities = 30/261 (11%), Positives = 73/261 (27%), Gaps = 26/261 (9%)
Query: 34 FLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVA 93
L ++ + + + +A+ +++ A + ++ +
Sbjct: 131 VLKSNPSENEEKEAQSQLVKADEMQRLRAQALDAFDSADYTAAITFLDEILEVCVWDAEL 190
Query: 94 RKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR 153
R+ + K + E+ + Y + + +V +
Sbjct: 191 RELRAECFIKEGEPRKAISDLKAASKLKNDNTEAFYKISILYYQLGDHELSLSEVRECLK 250
Query: 154 ATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVE------------------ 195
+ + + + + + A + GR A + E
Sbjct: 251 LDQDHKRCFAHYKQVKKLNKLIGSAEELIRDGRYTDATSKYESVMKAEPSVAEYTVRSKE 310
Query: 196 -IGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEA-REVVSLI 253
I + K + V AI VL D A+ EAY+ + DEA ++ +
Sbjct: 311 RICHCFSKDEKPVEAIKICSEVLQLEPD---NVNALKDRAEAYLIEEMYDEAIQDYEAAQ 367
Query: 254 QERYPQGYWA---RYVETLVK 271
++ + L+K
Sbjct: 368 EQNENDQQIREGLEKAQRLLK 388
>gi|224588324|gb|ACN58948.1| hypothetical protein AKSOIL_0107 [uncultured bacterium BLR7]
Length = 428
Score = 35.2 bits (78), Expect = 9.5, Method: Composition-based stats.
Identities = 26/228 (11%), Positives = 54/228 (23%), Gaps = 7/228 (3%)
Query: 25 TIFFSIAVCFLVGWERQSSRDVYLDSV-TDVRYQREVYEKAVLFLKEQNFSKAYEYFNQC 83
+ A+ FL G S + T Y+ +E +++A + F++
Sbjct: 80 LALIAGAMLFLQGAADPPSPSSVAAAPITANTEAAAAYQDCERLFREGKYAEAVQAFSRA 139
Query: 84 SRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQ 143
P A + + + S + + + YA+
Sbjct: 140 VERDPNMAQAYAFRGYTHNSLNDYDRAIADFARAIAIDPNDATSFSDRGMVFSNKKDYAR 199
Query: 144 MIRDVPYDQRATKL---MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYY 200
I D + + + A G +
Sbjct: 200 AIADYDQAIKLDPKLTYAFNGRGTVYNALGDDDRALADYDEAIRLDPNYAEAYGNRGVSF 259
Query: 201 LKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
+G+ AI + + A AY + A +
Sbjct: 260 KAKGDNDRAILEYSKAIELDPKF---ANAFGNRGIAYYDKGDYEHAIQ 304
>gi|190344528|gb|EDK36216.2| hypothetical protein PGUG_00314 [Meyerozyma guilliermondii ATCC
6260]
Length = 659
Score = 35.2 bits (78), Expect = 9.5, Method: Composition-based stats.
Identities = 19/214 (8%), Positives = 47/214 (21%), Gaps = 10/214 (4%)
Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
S + D Y + +A L + + KA ++ L
Sbjct: 330 SKEIEHCDKALLELYAT--FARAFKSLCKYDCYKAIRTIDELPAHEKETPWVLSKLGRLH 387
Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
+ + + + E +
Sbjct: 388 YEIVNHRQSEHYFVQLRSIDRTRLEDMEYYSTLLWHLHKKVDLTYLADELHEVDAKSPIT 447
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
+ ++ + A N+ + + Y +G +++ L N+
Sbjct: 448 WCVVGNLFSLNRDTDDA----ISCFNKAIRADRKFTYAYTLKGHEYFGNDNYEMALENFR 503
Query: 222 DA----EHAEEAMARLVEAYVALALMDEAREVVS 251
+ A+ + Y+ L A
Sbjct: 504 TSLLIDPRHYNALYGIGMVYINLGDFQRADYHFR 537
>gi|218245682|ref|YP_002371053.1| tetratricopeptide repeat-containing protein [Cyanothece sp. PCC
8801]
gi|218166160|gb|ACK64897.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 8801]
Length = 310
Score = 35.2 bits (78), Expect = 9.5, Method: Composition-based stats.
Identities = 23/245 (9%), Positives = 66/245 (26%), Gaps = 7/245 (2%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEY 79
K + L+ ++ E++++ + ++ ++ +A
Sbjct: 1 MKNQYHALLKFGLILLISLTCFIQPVKATTQISANVKDSELFDQGIEHIENNDYEQALSD 60
Query: 80 FNQCSRDFPFAGVARKSLLM--SAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLV 137
Q + S + + + + N Y +
Sbjct: 61 LTQVINLGSALTPSAYSNRCLVNLQLNNNQAAKLDCTEAIKLNPNNTEAYLNRGLAEYRL 120
Query: 138 GMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIG 197
G + + +R + ++ + + Y + Y + + G
Sbjct: 121 GNYEQALEQYQKVVERDADDYRSHYNQGLVNFALERYEIALQNYEKALASTRLISDSAKG 180
Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAE----HAEEAMARLVEAYVALALMDEA-REVVSL 252
Y R + Q +A++++A ++A AY + A + +
Sbjct: 181 IIYYDRALVQLKLDNIQQAIADFTEAINLDNLNDKAYYNRAYAYQKIKNYRAAIADFSEV 240
Query: 253 IQERY 257
I +
Sbjct: 241 IALNH 245
>gi|109946831|ref|YP_664059.1| paralysed flagella protein [Helicobacter acinonychis str. Sheeba]
gi|109714052|emb|CAJ99060.1| paralysed flagella protein [Helicobacter acinonychis str. Sheeba]
Length = 794
Score = 35.2 bits (78), Expect = 9.5, Method: Composition-based stats.
Identities = 8/50 (16%), Positives = 15/50 (30%)
Query: 218 ANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWARYVE 267
NY + E + + +A +A I Y +A +
Sbjct: 254 KNYPADPNIPEVLYYVAKALDENNNYKQAMRFYKRILLEYKNSRYAPLAQ 303
>gi|13324594|gb|AAK18800.1|AF305608_1 LMP1 [Borrelia burgdorferi]
Length = 1065
Score = 35.2 bits (78), Expect = 9.5, Method: Composition-based stats.
Identities = 23/219 (10%), Positives = 60/219 (27%)
Query: 42 SSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSA 101
+ + Y + Q + Y+ ++ K + + + E F+Q + P A + ++
Sbjct: 706 KAENAYEKIIKLTNTQEDHYKLGIIRFKLKKYEHSIESFDQTIKLDPKHKKALHNKGIAL 765
Query: 102 FVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQY 161
+ K ++ + Y + + Q K
Sbjct: 766 MMLNKNKKAIESFEKAIQIDKNYGTAYYQKGIAEEKNGDMQQAFASFKNAYNLDKNPNYA 825
Query: 162 MSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYS 221
+ + + + + N E+ I + + E + +
Sbjct: 826 LKAGIVSNNLGNFKQSEEYLNFFNANAKKPNEIAIYNLSIAKFENNKLEESLETINKAID 885
Query: 222 DAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQG 260
E + + A + SL+ E+ P+
Sbjct: 886 LNPEKSEYLYLKASINLKKENYQNAISLYSLVIEKNPEN 924
>gi|300869588|ref|ZP_07114169.1| putative Serine/threonine protein kinase with TPR repeats
[Oscillatoria sp. PCC 6506]
gi|300332456|emb|CBN59369.1| putative Serine/threonine protein kinase with TPR repeats
[Oscillatoria sp. PCC 6506]
Length = 774
Score = 35.2 bits (78), Expect = 9.6, Method: Composition-based stats.
Identities = 26/201 (12%), Positives = 53/201 (26%), Gaps = 10/201 (4%)
Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL-MSAFVQYSAGKYQ 111
+ R Y++A + +A + + Q + P A + ++ Q
Sbjct: 416 NSRDAEAYYKRANTHYDLGAYQQAIQDYTQAIQVDPNNVKAYYNRGLAYTDIEDRRSAVQ 475
Query: 112 QAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTN 171
+ YY +G + + Y +R + R
Sbjct: 476 DFTQVIRLNPNDAEAYYQRALGYYELGDYKTAIEDYTQAIRLNPNDAKSYSNRGLARSAA 535
Query: 172 SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSD----AEHAE 227
+ V R + ++ + +YS +
Sbjct: 536 GDKQGAMSDFTQAIELNPKQASVYYSRGRARFNL-----ADYKGAMEDYSQAIVLDPNQA 590
Query: 228 EAMARLVEAYVALALMDEARE 248
+A AY+ LA D+A E
Sbjct: 591 DAYTNRCSAYLNLATYDKAIE 611
>gi|295399327|ref|ZP_06809309.1| Tetratricopeptide TPR_2 repeat protein [Geobacillus
thermoglucosidasius C56-YS93]
gi|312110112|ref|YP_003988428.1| hypothetical protein GY4MC1_1005 [Geobacillus sp. Y4.1MC1]
gi|294978793|gb|EFG54389.1| Tetratricopeptide TPR_2 repeat protein [Geobacillus
thermoglucosidasius C56-YS93]
gi|311215213|gb|ADP73817.1| Tetratricopeptide TPR_1 repeat-containing protein [Geobacillus sp.
Y4.1MC1]
Length = 220
Score = 35.2 bits (78), Expect = 9.6, Method: Composition-based stats.
Identities = 23/219 (10%), Positives = 55/219 (25%), Gaps = 8/219 (3%)
Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
E + ++++ N+ +A + F+ + P V + K
Sbjct: 1 MEEKNRAGIAYMQKGNYEEAIKCFHDAIEENPNDPVGYINFGTVLAAAGEEEKALNFFKK 60
Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
E + + + +AQ + + S
Sbjct: 61 AIELDSNAAAAYYGMGSVFYKRQQFAQAKDMFEQAIQKGLNDGDVFFML----GMSLMHL 116
Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE----AMAR 232
A + A + G +A + + + E A
Sbjct: 117 EAPRLALPYLQRAAELNESDVEAVFQLGLCLAQLEFVDEAMRYFQKTIQLNERHADAYYN 176
Query: 233 LVEAYVALALMDEAREVVSLIQERYPQGYWARYVETLVK 271
L Y + A ++ + + P A Y + +++
Sbjct: 177 LGVIYAYKDDVKTALKMFTTALQIQPDHLLAGYGKKMME 215
>gi|298529231|ref|ZP_07016634.1| N-acetylmuramoyl-L-alanine amidase [Desulfonatronospira
thiodismutans ASO3-1]
gi|298510667|gb|EFI34570.1| N-acetylmuramoyl-L-alanine amidase [Desulfonatronospira
thiodismutans ASO3-1]
Length = 594
Score = 35.2 bits (78), Expect = 9.6, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 23/77 (29%), Gaps = 7/77 (9%)
Query: 198 RYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALM-------DEAREVV 250
R ++ RFQ L D A+ L Y L ++A E
Sbjct: 45 NRNQFRSHWLDLAGRFQQELDESQDGNDKARALYYLGRTYQELGKKSFLPSDFEKAEEFY 104
Query: 251 SLIQERYPQGYWARYVE 267
+ +P +A +
Sbjct: 105 TRAVREHPDTDFAGRSQ 121
>gi|213401323|ref|XP_002171434.1| tetratricopeptide repeat protein [Schizosaccharomyces japonicus
yFS275]
gi|211999481|gb|EEB05141.1| tetratricopeptide repeat protein [Schizosaccharomyces japonicus
yFS275]
Length = 1044
Score = 35.2 bits (78), Expect = 9.6, Method: Composition-based stats.
Identities = 23/190 (12%), Positives = 47/190 (24%), Gaps = 19/190 (10%)
Query: 59 EVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGE 118
+ KA++ ++NF A +++ + P + + ++A +
Sbjct: 175 ALMGKALVLYHKKNFRSALKFYQRALVSNP--SFQPDPRIGIGLCFWQLDMKEEAHAAWT 232
Query: 119 EYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGA 178
P + + L A L Y
Sbjct: 233 RAQELNPSNYAIGTYLSLYHYDRAFKNLGTEEFVANYSQALNY----------------- 275
Query: 179 RFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYV 238
A + + + A I V+ N + + + AY
Sbjct: 276 TQKAFKACPTNAVAACILAGFTYTKKNLEACIKLANAVVHNAFTPSLSADGYFWMGRAYH 335
Query: 239 ALALMDEARE 248
L DEA +
Sbjct: 336 QLGKYDEAMK 345
>gi|189346154|ref|YP_001942683.1| hypothetical protein Clim_0617 [Chlorobium limicola DSM 245]
gi|189340301|gb|ACD89704.1| Tetratricopeptide TPR_2 repeat protein [Chlorobium limicola DSM
245]
Length = 579
Score = 35.2 bits (78), Expect = 9.6, Method: Composition-based stats.
Identities = 26/263 (9%), Positives = 68/263 (25%), Gaps = 8/263 (3%)
Query: 15 WAYQLYKFALTIFFSIAVCFLVGW-----ERQSSRDVYLDSVTDVRYQREVYEKAVLFLK 69
++ ++ + IA FL + + + + A+L +
Sbjct: 10 MRFRFLRYMFFLLPVIAFPFLSSCTPRFAASHEVSMPATVRDSSAEHAKNRFIAALLLAE 69
Query: 70 EQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKN 129
+ +F A + + + FA AR + ++F++ + +
Sbjct: 70 KGDFWGAIDGYRSVQLNGSFAEAARDHAISASFLELGVIDSARVYAEKAAAGEPENRYYL 129
Query: 130 VDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVE-RYTNSPYVKGARFYVTVGRNQ 188
M ++ + ++ + + + A +
Sbjct: 130 RMLAAVAHLMKDYPRAVEIYRQLVQLEPQNSDYLTLLALEHIAAGDPEQALGIFQRLLSL 189
Query: 189 LAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEARE 248
+ + L + + + A + E E L E YV A +
Sbjct: 190 DPSNNSTRSQVLLLEIKLKHYENAIETLSALIEEGEEKERLKLTLGELYVETGQNGPASK 249
Query: 249 VVSLIQERYPQGYWARYVETLVK 271
I + L++
Sbjct: 250 TFREIIAA--NSRFVPAWLALLE 270
>gi|134045733|ref|YP_001097219.1| hypothetical protein MmarC5_0693 [Methanococcus maripaludis C5]
gi|132663358|gb|ABO35004.1| Tetratricopeptide TPR_2 repeat protein [Methanococcus maripaludis
C5]
Length = 395
Score = 35.2 bits (78), Expect = 9.6, Method: Composition-based stats.
Identities = 17/205 (8%), Positives = 59/205 (28%), Gaps = 3/205 (1%)
Query: 53 DVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQ 112
+ + ++++ K + + + KA E FN+ P A + + Q
Sbjct: 8 ETKEPKKLFGKGMEYYNRGKYQKAIELFNKTINSEPNNPHAWYFKGHAYQMLDKPKLAQD 67
Query: 113 AASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNS 172
+ E + + + + + + + + +
Sbjct: 68 SYEKALSISPNDLEMVKNYAMLLNSLELFNESVEVLKDVSEPDFEITEILGNAYLKMGKF 127
Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232
+ + + + G + ++ A+ ++ VL + + E
Sbjct: 128 DEALVEFDKILEKKPKYKEVLAKKGTVLVGLKKFDEALDIYEKVLKI---SPYDTEVWKN 184
Query: 233 LVEAYVALALMDEAREVVSLIQERY 257
+ A+ + ++A + + +
Sbjct: 185 IGNAFYTVKKYEKAIQFYDMYLTEH 209
>gi|260814860|ref|XP_002602131.1| hypothetical protein BRAFLDRAFT_128460 [Branchiostoma floridae]
gi|229287438|gb|EEN58143.1| hypothetical protein BRAFLDRAFT_128460 [Branchiostoma floridae]
Length = 1290
Score = 35.2 bits (78), Expect = 9.7, Method: Composition-based stats.
Identities = 22/192 (11%), Positives = 53/192 (27%), Gaps = 11/192 (5%)
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
Y+ A L L+ + + KA + + + V S ++
Sbjct: 795 YDLAELLLRLRQYDKAEKVLRVALEKETASDLQALMDETRCQVLLSKVHHKAGKIEEALG 854
Query: 121 ITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQR--------ATKLMLQYMSRIVERYTNS 172
+ + Q D + ++R+ +
Sbjct: 855 ALNKARDAQASICSQMAQHAKEQRDYDKAIKFYKEALVYSDNDGKAMLELARLYLAQDDL 914
Query: 173 PYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMAR 232
+ + + A + + ++ EY A +Q +L + EA++R
Sbjct: 915 DACQHQCAILLKTDKENDAATMMMADLMFRKNEYDQATFHYQQLLER---SPEHYEALSR 971
Query: 233 LVEAYVALALMD 244
L++ +D
Sbjct: 972 LIDLLRRAGRLD 983
>gi|47570454|ref|ZP_00241088.1| conserved hypothetical protein protein [Bacillus cereus G9241]
gi|47552874|gb|EAL11291.1| conserved hypothetical protein protein [Bacillus cereus G9241]
Length = 254
Score = 35.2 bits (78), Expect = 9.7, Method: Composition-based stats.
Identities = 9/60 (15%), Positives = 20/60 (33%), Gaps = 5/60 (8%)
Query: 19 LYKFALTIFFSIAVCFLVGWERQSSRDVYLDSVTDVRYQREV-----YEKAVLFLKEQNF 73
+ K + + + VG V+ ++E+ + KA LK + +
Sbjct: 1 MKKIMIASSLLLTIGLGVGCSSDKVSKTDGPKTASVKKEKELAAKDVFNKAYENLKNEEY 60
>gi|304396353|ref|ZP_07378234.1| TPR repeat-containing protein [Pantoea sp. aB]
gi|304355862|gb|EFM20228.1| TPR repeat-containing protein [Pantoea sp. aB]
Length = 294
Score = 35.2 bits (78), Expect = 9.8, Method: Composition-based stats.
Identities = 37/265 (13%), Positives = 66/265 (24%), Gaps = 30/265 (11%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSV------------------------TDVR 55
K L F L G + R + +V TD
Sbjct: 1 MKPFLRWCFVATALTLAGCSNSNWRKNEVLAVPLQPTLQQEVILARMEQILASRALTDDE 60
Query: 56 YQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAAS 115
+ +YE+ VL+ + A F+Q P L + + A
Sbjct: 61 RAQLLYERGVLYDSLGLRALARNDFSQALSIRPDMPEVFNYLGIYLTQAGNFDAAYDAFD 120
Query: 116 LGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYV 175
E Y + + G Y D+ + +
Sbjct: 121 SVLELDPTYNYAHLNRGIALYYGGRYKLAQDDLLAFYQDDPN--DPFRSLWLYLVEREMD 178
Query: 176 KGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM----A 231
R AAK+ + + + A+ +D E +
Sbjct: 179 ADKAKVALQQRYDKAAKDQWGWNIVEFYLGDINEKTLMESLKADATDNTSLAEHLSETNF 238
Query: 232 RLVEAYVALALMDEAREVVSLIQER 256
L + Y++L D+A+ + L
Sbjct: 239 YLGKYYLSLGEKDDAKALFKLAVAN 263
>gi|297621740|ref|YP_003709877.1| hypothetical protein wcw_1522 [Waddlia chondrophila WSU 86-1044]
gi|297377041|gb|ADI38871.1| conserved hypothetical protein [Waddlia chondrophila WSU 86-1044]
Length = 347
Score = 35.2 bits (78), Expect = 9.8, Method: Composition-based stats.
Identities = 16/74 (21%), Positives = 26/74 (35%)
Query: 174 YVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARL 233
Y G AA E+G G+ A+ +V N+ + + ++A L
Sbjct: 24 YHDGELTRKEDTPYLSAADHFELGMNAFHHGDMTLAVKHLHIVSHNFPNTSYGQDAFFYL 83
Query: 234 VEAYVALALMDEAR 247
+Y L D A
Sbjct: 84 GMSYYKLCEFDLAN 97
>gi|189424814|ref|YP_001951991.1| hypothetical protein Glov_1755 [Geobacter lovleyi SZ]
gi|189421073|gb|ACD95471.1| TPR repeat-containing protein [Geobacter lovleyi SZ]
Length = 265
Score = 35.2 bits (78), Expect = 9.8, Method: Composition-based stats.
Identities = 32/200 (16%), Positives = 54/200 (27%), Gaps = 6/200 (3%)
Query: 63 KAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYIT 122
+A+ L N + A + ++ S P A + + QA G + +
Sbjct: 12 RAIDLLDAGNPAAALQLLDKYSGHTPTDPHAHFYRGDTLAELGRLDEAIQAYRTGTDIVP 71
Query: 123 QYPESKNVDY---VYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
P++ R V L + + + K A
Sbjct: 72 DDPDALTTLGDLLFEAGRHQEALAQYRAVLLIDPQDADALVSIGLVHNALDQTEEAKAAF 131
Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
+G Y G++ AAI +Q + A L E Y
Sbjct: 132 RLAIEHEPDNTFAWNALGDLYYGSGDHKAAIEAYQKGIELDPTDPA---AYHNLGELYYD 188
Query: 240 LALMDEAREVVSLIQERYPQ 259
L D A E + + P
Sbjct: 189 LEEYDPAEENCKIAVKLAPD 208
>gi|218441625|ref|YP_002379954.1| serine/threonine protein kinase with TPR repeats [Cyanothece sp.
PCC 7424]
gi|218174353|gb|ACK73086.1| serine/threonine protein kinase with TPR repeats [Cyanothece sp.
PCC 7424]
Length = 730
Score = 35.2 bits (78), Expect = 9.8, Method: Composition-based stats.
Identities = 22/225 (9%), Positives = 50/225 (22%), Gaps = 26/225 (11%)
Query: 44 RDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFV 103
+ D Y+K +N+ +A + + + + P S
Sbjct: 487 NKSLQINPDDEWS---WYQKGFALQNLKNYEEAIKSYEKAVKINP-----------SFSQ 532
Query: 104 QYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMS 163
+ + + + R + +
Sbjct: 533 AWYQKGNSYMNLEKYSQAGESYRQAVQFQPDLYQAWYSQGIALNRLNRYREALKAFEEGT 592
Query: 164 RIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDA 223
+I + Y K + R K + +L +Y A
Sbjct: 593 QIQPNSFEAWYQKAWTLQTLNRYGEAVEAYNTATRLNPKNPQAWYNKGNSLYLLEDYQQA 652
Query: 224 EHAEE-----------AMARLVEAYVALALMDEA-REVVSLIQER 256
A + A L ++ L EA + ++ +
Sbjct: 653 IAAYQQVISLDKDFYPAWKSLGNSFFKLKRYSEAIKAYDQTLRYK 697
>gi|119485065|ref|ZP_01619450.1| TPR repeat protein [Lyngbya sp. PCC 8106]
gi|119457293|gb|EAW38418.1| TPR repeat protein [Lyngbya sp. PCC 8106]
Length = 815
Score = 35.2 bits (78), Expect = 9.8, Method: Composition-based stats.
Identities = 18/222 (8%), Positives = 52/222 (23%), Gaps = 1/222 (0%)
Query: 51 VTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKY 110
D + + L++ + ++Q + +P L +
Sbjct: 143 EPDKLQLEDYFNLGKTLLEQNQIEQVISLYSQAIKLYPNTAKIYYLLGQAFSQNEQWTAA 202
Query: 111 QQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYT 170
+ N + + + I + + + ++ + Y
Sbjct: 203 ISNYKQAIKINQTANHYYNSLGDAFSQLQQWNEAIDCYLHSIQIKPDVCWSYLKLADAYL 262
Query: 171 NSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAM 230
+ + A G + E + + +
Sbjct: 263 ECQHWENAIKTYYQGLELNPDNYWPYIKIGDAYIEQGHKKEAIAIYRQAQQINPNLSTSY 322
Query: 231 ARLVEAYVALALMDEAREVVSLIQERYPQGYW-ARYVETLVK 271
+L + DEA ++ E P + + L++
Sbjct: 323 YKLADLLQEFYQEDEAIDLYKKALEIDPNLPFLYEKLGDLLQ 364
>gi|91093513|ref|XP_969441.1| PREDICTED: similar to tpr repeat nuclear phosphoprotein [Tribolium
castaneum]
gi|270002675|gb|EEZ99122.1| hypothetical protein TcasGA2_TC005228 [Tribolium castaneum]
Length = 1187
Score = 35.2 bits (78), Expect = 9.8, Method: Composition-based stats.
Identities = 33/231 (14%), Positives = 78/231 (33%), Gaps = 19/231 (8%)
Query: 38 WERQSSRDVYLDSVTDVRYQREVY-EKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
S +Y D + + + Y + + + +A ++F + R A
Sbjct: 510 CLFDKSEKLYKDILKERPNYVDCYLRLGCMARDKGHIYEASDWFKEALRFNTEHPDAWSL 569
Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
L + G Q+ + +S ++ + + + Q +D ++R +
Sbjct: 570 LGNLHLAKAEWGPGQKKYERILKNPATSQDSYSLIVLGNVWLQTLHQPTKDKEREKRHQE 629
Query: 157 LMLQYMSRIVERYTNSPY--------------VKGARFYVTVGRNQLAAKEVEI---GRY 199
L ++++ + + V AR R A
Sbjct: 630 RALSMFKQVLKIDPKNIWAANGIGAVLAHKGAVNEARDIFAQVREATADFCDVWLNIAHV 689
Query: 200 YLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVV 250
Y+++ ++V+AI ++ L + + E + L AY + + EA+ V+
Sbjct: 690 YVEQKQFVSAIQMYENCLRKFFKYNNV-EVLQYLARAYYKASKLKEAKMVL 739
>gi|257796280|ref|NP_077797.3| tetratricopeptide repeat protein 28 [Mus musculus]
Length = 2481
Score = 35.2 bits (78), Expect = 9.9, Method: Composition-based stats.
Identities = 26/203 (12%), Positives = 55/203 (27%), Gaps = 12/203 (5%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
S D+ RE+ +++ +F A + Q R + K A+ +
Sbjct: 372 SKDDLSEARELGNMGAVYIAMGDFENAVQCHEQHLRIAK--DLGSKREEARAYSNLGSAY 429
Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
+ + + + + M + + + QY + +
Sbjct: 430 HYRRNFDKAMSYHNCVLELAQELMEKPIEMRAYAGLGHAARCMQDLERAKQYHEQQLGIA 489
Query: 170 TN-SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
+ R +G + + K +A SD
Sbjct: 490 EDLKDRAAEGRASSNLGIIHQMKGDYDTALKLHKTHLCIAQEL---------SDYAAQGR 540
Query: 229 AMARLVEAYVALALMDEAREVVS 251
A + AY AL + D+A +
Sbjct: 541 AYGNMGNAYNALGMYDQAVKYHR 563
>gi|149634296|ref|XP_001508738.1| PREDICTED: similar to OTTHUMP00000028696 [Ornithorhynchus anatinus]
Length = 2467
Score = 35.2 bits (78), Expect = 9.9, Method: Composition-based stats.
Identities = 23/202 (11%), Positives = 49/202 (24%), Gaps = 10/202 (4%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
S ++ RE+ +++ +F A + Q + + K A+ +
Sbjct: 333 SKDELSEARELGNMGAVYIAMGDFENAVQCHEQHLKIAK--DLGNKREEARAYSNLGSAY 390
Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
+ + + + M + + + QY + +
Sbjct: 391 HYRRNFDKAMSYHNSVLELAQELTEKAIEMRAYAGLGHAARCMQDLERAKQYHEQQLGIA 450
Query: 170 TNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEA 229
N + K L + A A
Sbjct: 451 ENLKDRAAEGRASSNLGIIHQMKGDYDAALKLHKTHLSIAQELSDYAAQG--------RA 502
Query: 230 MARLVEAYVALALMDEAREVVS 251
+ AY AL L D+A +
Sbjct: 503 YGNMGNAYNALGLYDQAVKYHR 524
>gi|148688047|gb|EDL19994.1| tetratricopeptide repeat domain 28 [Mus musculus]
Length = 2146
Score = 35.2 bits (78), Expect = 9.9, Method: Composition-based stats.
Identities = 26/203 (12%), Positives = 55/203 (27%), Gaps = 12/203 (5%)
Query: 50 SVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGK 109
S D+ RE+ +++ +F A + Q R + K A+ +
Sbjct: 37 SKDDLSEARELGNMGAVYIAMGDFENAVQCHEQHLRIAK--DLGSKREEARAYSNLGSAY 94
Query: 110 YQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERY 169
+ + + + + M + + + QY + +
Sbjct: 95 HYRRNFDKAMSYHNCVLELAQELMEKPIEMRAYAGLGHAARCMQDLERAKQYHEQQLGIA 154
Query: 170 TN-SPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEE 228
+ R +G + + K +A SD
Sbjct: 155 EDLKDRAAEGRASSNLGIIHQMKGDYDTALKLHKTHLCIAQEL---------SDYAAQGR 205
Query: 229 AMARLVEAYVALALMDEAREVVS 251
A + AY AL + D+A +
Sbjct: 206 AYGNMGNAYNALGMYDQAVKYHR 228
>gi|82701720|ref|YP_411286.1| hypothetical protein Nmul_A0586 [Nitrosospira multiformis ATCC
25196]
gi|82409785|gb|ABB73894.1| conserved hypothetical protein [Nitrosospira multiformis ATCC
25196]
Length = 573
Score = 35.2 bits (78), Expect = 9.9, Method: Composition-based stats.
Identities = 25/200 (12%), Positives = 53/200 (26%), Gaps = 7/200 (3%)
Query: 64 AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQ 123
A L L E+++SKA E F + + P ++ + + + + E +
Sbjct: 261 ARLLLAERDYSKAREQFQKLLTENPDNPDVAIAVGLLSLELQNYDVAESNFKRALELGYR 320
Query: 124 YPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVT 183
P + + + + + K ++
Sbjct: 321 DPGMVRFYLGGISEKKQQIPQALNWYRSVTEGTQFIPAQIKYAILLSRTGKTKEGLHHLQ 380
Query: 184 VG----RNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
Q A + + + G Y A L D+ E + A
Sbjct: 381 QLPVANDQQRAQVIIAEAQLLRESGAYKKAFQLLSSSLEKLPDSP---ELLYDRALAAEK 437
Query: 240 LALMDEAREVVSLIQERYPQ 259
+ D + + + E P
Sbjct: 438 IGKADIMEQDLRKLIELRPD 457
>gi|331089800|ref|ZP_08338693.1| hypothetical protein HMPREF1025_02276 [Lachnospiraceae bacterium
3_1_46FAA]
gi|330403497|gb|EGG83055.1| hypothetical protein HMPREF1025_02276 [Lachnospiraceae bacterium
3_1_46FAA]
Length = 926
Score = 35.2 bits (78), Expect = 9.9, Method: Composition-based stats.
Identities = 29/223 (13%), Positives = 74/223 (33%), Gaps = 9/223 (4%)
Query: 40 RQSSRDVYLDSVTDVRYQREVYEK-AVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLL 98
++ + ++ + + ++Y V+++ F KA + + +
Sbjct: 621 TKAQNIIDINHIKNPELTSDIYNDMGVIYINLDIFDKALANYQKAREIRESVENPDLEQI 680
Query: 99 MSAFVQY-SAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKL 157
++ + + Q+ + + + E + Y ++ + + Y Q A
Sbjct: 681 AYSYHNIGTVYQRQKKYADAITWHKKALEIRQEIYPDNEPIIAASLTMIGNDYTQAAKND 740
Query: 158 MLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVL 217
+ + E + + + + A IG ++ +GEY AI + L
Sbjct: 741 SSYHFNDAFEYFAKGL--EIRKLTLGETHPDTAWSYQSIGLWHFYQGEYEEAIENYLKCL 798
Query: 218 A-----NYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQE 255
+ + E L EAY+ + + A+E + L
Sbjct: 799 SIRKTILQPSHAYTAEISYLLGEAYLKINQIHSAKEHLLLFLY 841
>gi|218132070|ref|ZP_03460874.1| hypothetical protein BACEGG_03697 [Bacteroides eggerthii DSM 20697]
gi|217985720|gb|EEC52061.1| hypothetical protein BACEGG_03697 [Bacteroides eggerthii DSM 20697]
Length = 564
Score = 35.2 bits (78), Expect = 9.9, Method: Composition-based stats.
Identities = 20/228 (8%), Positives = 50/228 (21%), Gaps = 12/228 (5%)
Query: 20 YKFALTIFFSIAVCFLVGWERQSSRDVYLDSVT----DVRYQREVYEKA-VLFLKEQNFS 74
K L I IA + + Y D +E + +
Sbjct: 1 MKIRLLIALLIASVTITSCNDFLTEKEYDFIGPGLVGDSEDSKEYWLNGVYSTFNSGEYF 60
Query: 75 KAYEYFNQCSRDFP-FAGVARKSLLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYV 133
+ + + + + + ++ N +
Sbjct: 61 ----LYGAFEQMWELDSDDVTGPAWAMSGIGAGVFTEFWGYNVTWTGPYNIIHRANQALL 116
Query: 134 YYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKE 193
S ++ ++ Q Y + + + + A E
Sbjct: 117 RVAEMGSLSEESKNDALGQLYFLRAFAYFQLVRAYGPCPIHETSVSEGDEPHKPRAAVSE 176
Query: 194 VEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVALA 241
V +K + + + + A L + Y+ +A
Sbjct: 177 VY--AQIIKDLKMAETLMFSMKSQEHKPGRPASGAASLLLAKVYLTMA 222
>gi|126178012|ref|YP_001045977.1| TPR repeat-containing protein [Methanoculleus marisnigri JR1]
gi|125860806|gb|ABN55995.1| TPR repeat-containing protein [Methanoculleus marisnigri JR1]
Length = 562
Score = 35.2 bits (78), Expect = 9.9, Method: Composition-based stats.
Identities = 24/195 (12%), Positives = 51/195 (26%), Gaps = 2/195 (1%)
Query: 61 YEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASLGEEY 120
Y + + N A + + R P VA + + + + E
Sbjct: 352 YYRGESYYALGNCEAAIDCYRAVVRLNPENAVAWNNCGNALYHLKHYEEALVCYERALEI 411
Query: 121 ITQYPESKNV-DYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVKGAR 179
+ N V ++ ++ + + ++ V + Y +
Sbjct: 412 DPENRRVWNNKASVLSVLSHYDKALVCYDQELLAHPENADAWYNKGVALFVLGRYSEAVT 471
Query: 180 FYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEAYVA 239
Y V A EV + + + + EA+ A +
Sbjct: 472 CYAHVLEIDPARAEVWNTMGNALVIL-ERSEEALECYDLALAASPDDIEALNGKAVALIN 530
Query: 240 LALMDEAREVVSLIQ 254
L EA + +Q
Sbjct: 531 LDRPAEAAKYYERLQ 545
>gi|118785037|ref|XP_314265.3| AGAP003363-PA [Anopheles gambiae str. PEST]
gi|116128163|gb|EAA09649.3| AGAP003363-PA [Anopheles gambiae str. PEST]
Length = 676
Score = 35.2 bits (78), Expect = 9.9, Method: Composition-based stats.
Identities = 20/208 (9%), Positives = 47/208 (22%)
Query: 57 QREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKSLLMSAFVQYSAGKYQQAASL 116
+ Y A L + + + A+ ++ + P A +L + + +
Sbjct: 424 AKVYYNIARLATDQGDRATAFTFYRRAIELHPEYEAAHMNLGNLYRETHELDRAEWHLRR 483
Query: 117 GEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATKLMLQYMSRIVERYTNSPYVK 176
E +P + + + + + + + Y +
Sbjct: 484 AIEIHEPFPSAWMNLGIVQAARKDHDAALTSYQRALQLKPNYANCLYNLGNLYIDKQNSS 543
Query: 177 GARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLVLANYSDAEHAEEAMARLVEA 236
A Y Q + + + + A
Sbjct: 544 MALRYWREAIQQNPRHSKAWANILALYDNRDRTEDIIRTSALALTFLPNDTAILFTRANA 603
Query: 237 YVALALMDEAREVVSLIQERYPQGYWAR 264
Y L + A + I P R
Sbjct: 604 YGKLGQYETAESLYHQIIAARPDHAVYR 631
>gi|116327789|ref|YP_797509.1| TPR repeat-containing protein [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116120533|gb|ABJ78576.1| Tetratricopeptide repeat family protein [Leptospira borgpetersenii
serovar Hardjo-bovis L550]
Length = 281
Score = 35.2 bits (78), Expect = 9.9, Method: Composition-based stats.
Identities = 23/226 (10%), Positives = 61/226 (26%), Gaps = 8/226 (3%)
Query: 37 GWERQSSRDVYLDSVTDVRYQREVYEKAVLFLKEQNFSKAYEYFNQCSRDFPFAGVARKS 96
E + + + E++ +A ++ ++ KA + +++ P +
Sbjct: 47 SSESSNPNPTASVTNNNGEDPNEIFNRAYRTNEKGDYLKAIKEYSKYLELVPGDASGYYN 106
Query: 97 LLMSAFVQYSAGKYQQAASLGEEYITQYPESKNVDYVYYLVGMSYAQMIRDVPYDQRATK 156
++ + G+ + E + + AQ I D +
Sbjct: 107 RGLAKYTLKQYGEAVKDFDKAAETDPNKASVFLYKGYGNEMLDNCAQAIDDFQKAIELGE 166
Query: 157 LMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPRFQLV 216
+ + + + + + + R+
Sbjct: 167 KNDP---ELYGHKARCENHDENYDEGFKDALKAVNLDKKNVYAFFELAYAQYGLERYSDS 223
Query: 217 LANYSD----AEHAEEAMARLVEAYVALALMDEA-REVVSLIQERY 257
+A+YS + E A AY L + A ++ + Y
Sbjct: 224 VASYSMVLQLNPNDEVAFHNRGLAYAFLKKIPSACKDFRKSLGLGY 269
>gi|47224137|emb|CAG13057.1| unnamed protein product [Tetraodon nigroviridis]
Length = 303
Score = 35.2 bits (78), Expect = 9.9, Method: Composition-based stats.
Identities = 13/112 (11%), Positives = 33/112 (29%)
Query: 153 RATKLMLQYMSRIVERYTNSPYVKGARFYVTVGRNQLAAKEVEIGRYYLKRGEYVAAIPR 212
+ K + + + S + + A + + +
Sbjct: 149 QYFKDGKYKQASVQYKKIVSWLEHESGLAEEDEKKAKALRLAAHLNLAMCFLKVKELTQA 208
Query: 213 FQLVLANYSDAEHAEEAMARLVEAYVALALMDEAREVVSLIQERYPQGYWAR 264
+ + E+A+ R EA+ + D+A+ + + YP A+
Sbjct: 209 LENCDKALELDQSNEKALFRRGEAFFNMNEFDKAKNDFQQVVQLYPTNKAAK 260
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.314 0.0947 0.237
Lambda K H
0.267 0.0290 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,120,915,238
Number of Sequences: 14124377
Number of extensions: 31019456
Number of successful extensions: 549865
Number of sequences better than 10.0: 8126
Number of HSP's better than 10.0 without gapping: 3238
Number of HSP's successfully gapped in prelim test: 4888
Number of HSP's that attempted gapping in prelim test: 524195
Number of HSP's gapped (non-prelim): 22840
length of query: 271
length of database: 4,842,793,630
effective HSP length: 137
effective length of query: 134
effective length of database: 2,907,753,981
effective search space: 389639033454
effective search space used: 389639033454
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 79 (35.5 bits)