HHsearch alignment for GI: 254781176 and conserved domain: PRK05442

Probab=91.06  E-value=0.66  Score=26.02  Aligned_cols=106  Identities=18%  Similarity=0.238  Sum_probs=55.5

Q ss_pred             EEEEEE-ECCCHHHHHHHHHHCCCCC----CEEEEECC--CHHHHH-----HCCCCEEEEECCCCCCCCCCCCCHHHHHH
Q ss_conf             179999-6681479999999858998----44999825--578855-----18997048515542556788888389999
Q gi|254781176|r   16 RITVFG-VGGGGGNAVNNMVSSGLQG----VNFVVANT--DAQALM-----MSKAKQIIQLGSGITEGLGAGSHPEVGRA   83 (502)
Q Consensus        16 ~i~v~g-~gg~g~n~~~~~~~~~~~~----~~~~~~nt--d~~~l~-----~~~~~~~~~~g~~~~~g~g~g~~~~~g~~   83 (502)
T Consensus         6 kV~I~GAaG~ig~~l~~~la~g~l~g~~~~v~l~L~Di~~~~~~l~G~ameL~d~a~p~l------~~v~~~--------   71 (325)
T PRK05442          6 RVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPQAQKALKGVVMELEDCAFPLL------AGVVIT--------   71 (325)
T ss_pred             EEEEECCCCHHHHHHHHHHHCHHHCCCCCCEEEEEECCCCCCCCCCEEEEEHHCCCCCCC------CCEEEE--------
T ss_conf             999988886888999999866132089984699996577766655667734211675444------876850--------


Q ss_pred             HHHHHHHHHHHHHCCCCEEEEEECCCCCCCCC-------HHHHHHHHHHHC-----CCEEEEEEECCCCC
Q ss_conf             99972999999726998999980367666740-------789999999864-----98499995043000
Q gi|254781176|r   84 AAEECIDEITEMLDKTHMCFVTAGMGGGTGTG-------AAPIIAKIARNK-----GVLTVGVVTKPFHF  141 (502)
Q Consensus        84 ~a~~~~~~i~~~~~~~~~~~~~ag~gggtgtg-------~~p~ia~~a~~~-----~~~~~~~v~~pf~~  141 (502)
T Consensus        72 ------~~~~~a~~~aDvviitag~prkPGmtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlVv~NPvd~  135 (325)
T PRK05442         72 ------DDPKVAFKDADVALLVGARPRGPGMERKDLLKANGEIFTAQGKALNEVAARDVKVLVVGNPANT  135 (325)
T ss_pred             ------CCHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHH
T ss_conf             ------8878983799889980786799997489999760889999999998657987189995781587