HHsearch alignment for GI: 254781176 and conserved domain: cd00300
>cd00300 LDH_like L-lactate dehydrogenase-like enzymes. Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot
Probab=95.27 E-value=0.23 Score=29.45 Aligned_cols=102 Identities=25% Similarity=0.421 Sum_probs=64.2
Q ss_pred EEEEEECCCHHHHHHHHHHCCCCCCEEEEEC--C---CHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 7999966814799999998589984499982--5---5788551899704851554255678888838999999972999
Q gi|254781176|r 17 ITVFGVGGGGGNAVNNMVSSGLQGVNFVVAN--T---DAQALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAEECIDE 91 (502)
Q Consensus 17 i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~n--t---d~~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~~~~ 91 (502)
T Consensus 1 V~IIGaG~VG~~~A~~l~~~~l~~-el~L~Di~~~~a~g~a~Dl~~~~~~~~~-~~~---~~-~~~-------------- 60 (300)
T cd00300 1 ITIIGAGNVGAAVAFALIAKGLAS-ELVLVDVNEEKAKGDALDLSHASAFLAT-GTI---VR-GGD-------------- 60 (300)
T ss_pred CEEECCCHHHHHHHHHHHHCCCCC-EEEEECCCCCCCHHHHHHHHHCCCCCCC-CEE---EC-CCC--------------
T ss_conf 989896889999999998679988-7999818998115688887725634688-539---82-798--------------
Q ss_pred HHHHHCCCCEEEEEECCCCCCCCC-------HHHHHHHHHHHC-----CCEEEEEEECCCC
Q ss_conf 999726998999980367666740-------789999999864-----9849999504300
Q gi|254781176|r 92 ITEMLDKTHMCFVTAGMGGGTGTG-------AAPIIAKIARNK-----GVLTVGVVTKPFH 140 (502)
Q Consensus 92 i~~~~~~~~~~~~~ag~gggtgtg-------~~p~ia~~a~~~-----~~~~~~~v~~pf~ 140 (502)
T Consensus 61 -~~~~~daDvvVitaG~~rkpg~tR~dll~~Na~I~k~i~~~i~~~~p~~-ivivvtNPvD 119 (300)
T cd00300 61 -YADAADADIVVITAGAPRKPGETRLDLINRNAPILRSVITNLKKYGPDA-IILVVSNPVD 119 (300)
T ss_pred -HHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC-EEEECCCCHH
T ss_conf -8996799999987898999799889999988899999999998419971-8998579669