HHsearch alignment for GI: 254781176 and conserved domain: cd00300

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes. Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot
Probab=95.27  E-value=0.23  Score=29.45  Aligned_cols=102  Identities=25%  Similarity=0.421  Sum_probs=64.2

Q ss_pred             EEEEEECCCHHHHHHHHHHCCCCCCEEEEEC--C---CHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf             7999966814799999998589984499982--5---5788551899704851554255678888838999999972999
Q gi|254781176|r   17 ITVFGVGGGGGNAVNNMVSSGLQGVNFVVAN--T---DAQALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAEECIDE   91 (502)
Q Consensus        17 i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~n--t---d~~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~~~~   91 (502)
T Consensus         1 V~IIGaG~VG~~~A~~l~~~~l~~-el~L~Di~~~~a~g~a~Dl~~~~~~~~~-~~~---~~-~~~--------------   60 (300)
T cd00300           1 ITIIGAGNVGAAVAFALIAKGLAS-ELVLVDVNEEKAKGDALDLSHASAFLAT-GTI---VR-GGD--------------   60 (300)
T ss_pred             CEEECCCHHHHHHHHHHHHCCCCC-EEEEECCCCCCCHHHHHHHHHCCCCCCC-CEE---EC-CCC--------------
T ss_conf             989896889999999998679988-7999818998115688887725634688-539---82-798--------------


Q ss_pred             HHHHHCCCCEEEEEECCCCCCCCC-------HHHHHHHHHHHC-----CCEEEEEEECCCC
Q ss_conf             999726998999980367666740-------789999999864-----9849999504300
Q gi|254781176|r   92 ITEMLDKTHMCFVTAGMGGGTGTG-------AAPIIAKIARNK-----GVLTVGVVTKPFH  140 (502)
Q Consensus        92 i~~~~~~~~~~~~~ag~gggtgtg-------~~p~ia~~a~~~-----~~~~~~~v~~pf~  140 (502)
T Consensus        61 -~~~~~daDvvVitaG~~rkpg~tR~dll~~Na~I~k~i~~~i~~~~p~~-ivivvtNPvD  119 (300)
T cd00300          61 -YADAADADIVVITAGAPRKPGETRLDLINRNAPILRSVITNLKKYGPDA-IILVVSNPVD  119 (300)
T ss_pred             -HHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC-EEEECCCCHH
T ss_conf             -8996799999987898999799889999988899999999998419971-8998579669