HHsearch alignment for GI: 254781176 and conserved domain: cd00704
>cd00704 MDH Malate dehydrogenase. Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=95.34 E-value=0.09 Score=32.42 Aligned_cols=101 Identities=16% Similarity=0.201 Sum_probs=57.7
Q ss_pred EEEEEEE-CCCHHHHHHHHHHCCCCC----CEEEEECCC-------HHHHHHCC--CC--EEEEECCCCCCCCCCCCCHH
Q ss_conf 1799996-681479999999858998----449998255-------78855189--97--04851554255678888838
Q gi|254781176|r 16 RITVFGV-GGGGGNAVNNMVSSGLQG----VNFVVANTD-------AQALMMSK--AK--QIIQLGSGITEGLGAGSHPE 79 (502)
Q Consensus 16 ~i~v~g~-gg~g~n~~~~~~~~~~~~----~~~~~~ntd-------~~~l~~~~--~~--~~~~~g~~~~~g~g~g~~~~ 79 (502)
T Consensus 2 KV~IiGA~G~IG~~la~~l~~~~l~g~~~~i~l~L~Di~~~~~~~~G~~mdl~~~a~~~~~~v~~~----------~--- 68 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEGVVMELQDCAFPLLKGVVIT----------T--- 68 (323)
T ss_pred EEEEECCCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCEEEC----------C---
T ss_conf 899989997899999999972863699860089997588865553148786653466555874842----------8---
Q ss_pred HHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCC-------HHHHHHHHHHHC-----CCEEEEEEECCCC
Q ss_conf 999999972999999726998999980367666740-------789999999864-----9849999504300
Q gi|254781176|r 80 VGRAAAEECIDEITEMLDKTHMCFVTAGMGGGTGTG-------AAPIIAKIARNK-----GVLTVGVVTKPFH 140 (502)
Q Consensus 80 ~g~~~a~~~~~~i~~~~~~~~~~~~~ag~gggtgtg-------~~p~ia~~a~~~-----~~~~~~~v~~pf~ 140 (502)
T Consensus 69 -----------~~~~~~~~aDvViitaG~prkpG~tR~DLl~~N~~I~k~~~~~i~~~a~p~~~vivvsNPvD 130 (323)
T cd00704 69 -----------DPEEAFKDVDVAILVGAFPRKPGMERADLLRKNAKIFKEQGEALNKVAKPTVKVLVVGNPAN 130 (323)
T ss_pred -----------CHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCH
T ss_conf -----------85898379988998278788999827999987489999999999851799838999578646