HHsearch alignment for GI: 254781176 and conserved domain: cd01336
>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=91.17 E-value=0.78 Score=25.48 Aligned_cols=106 Identities=17% Similarity=0.211 Sum_probs=58.1
Q ss_pred EEEEEE-ECCCHHHHHHHHHHCCCCC----CEEEEECCC--HHHHH-----HCCCCEEEEECCCCCCCCCCCCCHHHHHH
Q ss_conf 179999-6681479999999858998----449998255--78855-----18997048515542556788888389999
Q gi|254781176|r 16 RITVFG-VGGGGGNAVNNMVSSGLQG----VNFVVANTD--AQALM-----MSKAKQIIQLGSGITEGLGAGSHPEVGRA 83 (502)
Q Consensus 16 ~i~v~g-~gg~g~n~~~~~~~~~~~~----~~~~~~ntd--~~~l~-----~~~~~~~~~~g~~~~~g~g~g~~~~~g~~ 83 (502)
T Consensus 4 kV~VtGAaG~Ig~~l~~~la~g~~~g~~~~i~L~L~Di~~~~~~l~Gv~mel~d~------a~p~l~~i~~~~~~----- 72 (325)
T cd01336 4 RVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDC------AFPLLKSVVATTDP----- 72 (325)
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEHHHC------CCCCCCCEEECCCH-----
T ss_conf 9999888718899999999758856899705999966778677655267457437------86455873522887-----
Q ss_pred HHHHHHHHHHHHHCCCCEEEEEECCCCCCCCC-------HHHHHHHHHHHC-----CCEEEEEEECCCCC
Q ss_conf 99972999999726998999980367666740-------789999999864-----98499995043000
Q gi|254781176|r 84 AAEECIDEITEMLDKTHMCFVTAGMGGGTGTG-------AAPIIAKIARNK-----GVLTVGVVTKPFHF 141 (502)
Q Consensus 84 ~a~~~~~~i~~~~~~~~~~~~~ag~gggtgtg-------~~p~ia~~a~~~-----~~~~~~~v~~pf~~ 141 (502)
T Consensus 73 ---------~~a~~~aDvvii~ag~prkpGmtR~DLl~~Na~I~k~~~~~I~~~a~p~~~viVv~NPvn~ 133 (325)
T cd01336 73 ---------EEAFKDVDVAILVGAMPRKEGMERKDLLKANVKIFKEQGEALDKYAKKNVKVLVVGNPANT 133 (325)
T ss_pred ---------HHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHH
T ss_conf ---------8983688789994887799998279999989999999999999861458199992793588