HHsearch alignment for GI: 254781176 and conserved domain: cd02188

>cd02188 gamma_tubulin Gamma-tubulin is a ubiquitous phylogenetically conserved member of tubulin superfamily. Gamma is a low abundance protein present within the cells in both various types of microtubule-organizing centers and cytoplasmic protein complexes. Gamma-tubulin recruits the alpha/beta-tubulin dimers that form the minus ends of microtubules and is thought to be involved in microtubule nucleation and capping.
Probab=99.28  E-value=1.1e-10  Score=98.27  Aligned_cols=269  Identities=18%  Similarity=0.249  Sum_probs=172.9

Q ss_pred             EEEEEECCCHHHHHHHHHHC-----CC-------------------------CC---CEEEEECCCHHHHHHCCCCE---
Q ss_conf             79999668147999999985-----89-------------------------98---44999825578855189970---
Q gi|254781176|r   17 ITVFGVGGGGGNAVNNMVSS-----GL-------------------------QG---VNFVVANTDAQALMMSKAKQ---   60 (502)
Q Consensus        17 i~v~g~gg~g~n~~~~~~~~-----~~-------------------------~~---~~~~~~ntd~~~l~~~~~~~---   60 (502)
T Consensus         3 II~iqvGQcGnQIG~~fW~~l~~Eh~i~~~g~~~~~~~~~~~~~~~fF~e~~~~~~~pRavliD~E~~vI~~i~~~~~~~   82 (431)
T cd02188           3 IITLQVGQCGNQIGSEFWKQLCAEHGISPDGILEDFATDGGDRKDVFFYQADDEHYVPRAILIDLEPRVINSIQNSEYRN   82 (431)
T ss_pred             EEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEECCHHHHHHHHCCCCCC
T ss_conf             89995377298999999999999858698998777766555554423788899977367799989816898884686514


Q ss_pred             -----EEEECCCCCCCCCCCCCHHH----HHHHHHHHHHHHHHHHCCCCE---EEEEECCCCCCCCCHHHHHHHHHHHC-
Q ss_conf             -----48515542556788888389----999999729999997269989---99980367666740789999999864-
Q gi|254781176|r   61 -----IIQLGSGITEGLGAGSHPEV----GRAAAEECIDEITEMLDKTHM---CFVTAGMGGGTGTGAAPIIAKIARNK-  127 (502)
Q Consensus        61 -----~~~~g~~~~~g~g~g~~~~~----g~~~a~~~~~~i~~~~~~~~~---~~~~ag~gggtgtg~~p~ia~~a~~~-  127 (502)
T Consensus        83 lf~~~n~~~~---~~~~gsgnNwA~GY~~G~~~~d~i~d~irk~~E~cD~l~gf~~~~Sl~GGTGSGlgs~l~e~l~d~y  159 (431)
T cd02188          83 LYNPENIFLS---KHGGGAGNNWASGYSQGEEVQEEILDIIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLERLNDRY  159 (431)
T ss_pred             CCCCCCEEEE---CCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHH
T ss_conf             4385437983---4578876644756454399899999999999980887565688974488675408999999999871


Q ss_pred             -CCEEEEEEECCCCC-CCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH-HHHHHHHHHHHHHHHHHH
Q ss_conf             -98499995043000-4067--888899999999986333545027888741366531899-974467999999888887
Q gi|254781176|r  128 -GVLTVGVVTKPFHF-EGSR--RMRVAESGIEALQETVDTLIVIPNQNLFRIANDKTTFAD-AFSMADQVLYSGVSCITD  202 (502)
Q Consensus       128 -~~~~~~~v~~pf~~-eg~~--r~~~a~~~~~~l~~~~d~~i~i~n~~l~~~~~~~~~~~~-af~~~d~~l~~~v~~i~~  202 (502)
T Consensus       160 p~~~i~~~~V~P~~~~~~~vivqpYNsvLsl~~L~e~sd~v~~~dN~aL~~i~~~~l~~~~~~~~~~N~vIa~~ls~~t~  239 (431)
T cd02188         160 PKKLIQTYSVFPNQDESSDVVVQPYNSILTLKRLILNADCVVVLDNTALNRIATDRLHIQNPTFDQINSLVSTVMSASTT  239 (431)
T ss_pred             CCCEEEEEEEECCCCCCCCCEEECCHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCC
T ss_conf             50307568986688666770433236465378898608656862538899999985599998878899999998603553


Q ss_pred             HHHCCCCCCCCHHHHHHHHC-CCCEEEEEEEECC-----CCCH-----HHHHHHHHHH--CCCCCCCCCCCCCEEE---E
Q ss_conf             65166555589878787641-5865899876148-----6204-----8999988752--7010002245553789---9
Q gi|254781176|r  203 LMIKEGLINLDFADVRSVMR-NMGRAMMGTGEAS-----GHGR-----GIQAAEAAVA--NPLLDEASMKGSQGLL---I  266 (502)
Q Consensus       203 ~i~~~g~in~df~d~~~v~~-~~g~a~~g~g~~~-----g~~r-----~~~a~~~a~~--~pll~~~~~~~a~~~l---~  266 (502)
T Consensus       240 ~~Rf~g~~n~dl~~l~~nLvP~P~l~fl~~s~~P~~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~-~~~~-~~~~~ls~~  317 (431)
T cd02188         240 TLRYPGYMNNDLISLIASLIPTPRLHFLMTSYTPLTSDQIAASVRKTTVLDVMRRLLQPKNIMVS-TATR-KNGCYISIL  317 (431)
T ss_pred             CEECCCCCCCCHHHHHHCCCCCCCCEEEECCCCCCCCCCCHHHHHCCCHHHHHHHHHCCCCCEEE-CCCC-CCCHHHHHH
T ss_conf             12358634765899976068875532210145665343210124038899999997482466562-3688-785577779


Q ss_pred             EEECCCCCCHHHHHHHHHHHHHHCC
Q ss_conf             9616888899999999999997416
Q gi|254781176|r  267 SITGGSDLTLFEVDEAATRIREEVD  291 (502)
Q Consensus       267 ~i~~~~~~~l~e~~~~~~~i~~~~~  291 (502)
T Consensus       318 ~~~RG-~~~~~~~~~~~~~~~~~~~  341 (431)
T cd02188         318 NIIQG-EVDPTQVHKSLQRIRERRL  341 (431)
T ss_pred             HHHCC-CCCHHHHHHHHHHHHHHCC
T ss_conf             98848-9887899999999987367