HHsearch alignment for GI: 254781176 and conserved domain: cd02189

>cd02189 delta_tubulin The tubulin superfamily includes five distinct families, the alpha-, beta-, gamma-, delta-, and epsilon-tubulins and a sixth family (zeta-tubulin) which is present only in kinetoplastid protozoa. The alpha- and beta-tubulins are the major components of microtubules, while gamma-tubulin plays a major role in the nucleation of microtubule assembly. The delta- and epsilon-tubulins are widespread but unlike the alpha, beta, and gamma-tubulins they are not ubiquitous among eukaryotes. Delta-tubulin plays an essential role in forming the triplet microtubules of centrioles and basal bodies.
Probab=99.10  E-value=2.8e-09  Score=87.93  Aligned_cols=200  Identities=17%  Similarity=0.258  Sum_probs=139.8

Q ss_pred             EEEEEECCCHHHHHHHHHHC-----C------------------------CCCCEEEEECCCHHHHHHCCCC-EEEE--E
Q ss_conf             79999668147999999985-----8------------------------9984499982557885518997-0485--1
Q gi|254781176|r   17 ITVFGVGGGGGNAVNNMVSS-----G------------------------LQGVNFVVANTDAQALMMSKAK-QIIQ--L   64 (502)
Q Consensus        17 i~v~g~gg~g~n~~~~~~~~-----~------------------------~~~~~~~~~ntd~~~l~~~~~~-~~~~--~   64 (502)
T Consensus         2 II~iqvGQcGnQIG~~fW~~l~~E~~~~~~~~~~~~~~~~~~ff~e~~~~~~vpRavliD~Ep~vI~~i~~~~~~~~~~~   81 (446)
T cd02189           2 VVTVQLGQCGNQLGHELFDTLAKEASSSDDEGYKYERDAQERFFSEKSDGQPIARSVLVDMEPKVIESTLSKSSGGTWKY   81 (446)
T ss_pred             EEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCCCCCEEEEECCHHHHHHHHCCCCCCCCCC
T ss_conf             78997487499999999999997318897766455543300000055699650577999887238999856665554667


Q ss_pred             CC--CCCCCCCCCCCH-----HHHHHHHHHHHHHHHHHHCCCCE---EEEEECCCCCCCCCHHHHHHHHHHHC--CCEEE
Q ss_conf             55--425567888883-----89999999729999997269989---99980367666740789999999864--98499
Q gi|254781176|r   65 GS--GITEGLGAGSHP-----EVGRAAAEECIDEITEMLDKTHM---CFVTAGMGGGTGTGAAPIIAKIARNK--GVLTV  132 (502)
Q Consensus        65 g~--~~~~g~g~g~~~-----~~g~~~a~~~~~~i~~~~~~~~~---~~~~ag~gggtgtg~~p~ia~~a~~~--~~~~~  132 (502)
T Consensus        82 ~~~n~i~~~~gsgNNwA~Gy~~~G~~~~d~i~d~IRk~~E~CD~lqGF~i~hSlgGGTGSGlGs~lle~L~d~yp~~~~~  161 (446)
T cd02189          82 DKKNVICQQSGSGNNWAYGYYVHGPQIKEDILDLIRKEVEKCDSFEGFLVLHSLAGGTGSGLGSRVTELLRDEYPESLLL  161 (446)
T ss_pred             CCCCEEECCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEE
T ss_conf             85307877878522104530042588899999999999973577576677840578675417778889988766875056


Q ss_pred             EEEECCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH-HHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf             995043000-4067888899999999986333545027888741366531899-97446799999988888765166555
Q gi|254781176|r  133 GVVTKPFHF-EGSRRMRVAESGIEALQETVDTLIVIPNQNLFRIANDKTTFAD-AFSMADQVLYSGVSCITDLMIKEGLI  210 (502)
Q Consensus       133 ~~v~~pf~~-eg~~r~~~a~~~~~~l~~~~d~~i~i~n~~l~~~~~~~~~~~~-af~~~d~~l~~~v~~i~~~i~~~g~i  210 (502)
T Consensus       162 ~~~V~P~~~~evvvepYNs~Lsl~~L~e~sD~v~~~dN~aL~~i~~~~~~~~~~~~~~lN~~Ia~~ls~~~~p~~~~~~~  241 (446)
T cd02189         162 NIVVWPYTTGEVIVQNYNTVLTLAHLYESSDAIILLENDDIHRICSKLRNLKNVSLSDINKVIAHQLASLLQPSLDSTGS  241 (446)
T ss_pred             EEEEECCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf             68960577886200125307778889852763466118889999998548999986789999999985113434357764


Q ss_pred             CCCHHH
Q ss_conf             589878
Q gi|254781176|r  211 NLDFAD  216 (502)
Q Consensus       211 n~df~d  216 (502)
T Consensus       242 ~~~~~~  247 (446)
T cd02189         242 NGALAG  247 (446)
T ss_pred             CCCCHH
T ss_conf             555502