HHsearch alignment for GI: 254781176 and conserved domain: cd02190
>cd02190 epsilon_tubulin The tubulin superfamily includes five distinct families, the alpha-, beta-, gamma-, delta-, and epsilon-tubulins and a sixth family (zeta-tubulin) which is present only in kinetoplastid protozoa. The epsilon-tubulins which are widespread but not ubiquitous among eukaryotes play a role in basal body/centriole morphogenesis.
Probab=99.16 E-value=2.5e-09 Score=88.27 Aligned_cols=261 Identities=18% Similarity=0.218 Sum_probs=171.8
Q ss_pred EEEEEECCCHHHHHHHHHH----CCCCCCEEEEECCCHHHHHHCC-CCEEEEECC--CCCCCCCCCCCHHHHH-----HH
Q ss_conf 7999966814799999998----5899844999825578855189-970485155--4255678888838999-----99
Q gi|254781176|r 17 ITVFGVGGGGGNAVNNMVS----SGLQGVNFVVANTDAQALMMSK-AKQIIQLGS--GITEGLGAGSHPEVGR-----AA 84 (502)
Q Consensus 17 i~v~g~gg~g~n~~~~~~~----~~~~~~~~~~~ntd~~~l~~~~-~~~~~~~g~--~~~~g~g~g~~~~~g~-----~~ 84 (502)
T Consensus 3 IItiqvGQcGnQIG~~fw~~~~~Eh~~-~RavliD~e~~vi~~i~~~~~~~~~~~~~~~~~~~gsGNNwa~Gy~~~G~~~ 81 (379)
T cd02190 3 IIVVQVGQCGNQIGCRFWDLALREHLK-ARAVLIDMEEGVVNEILKGPLRDLFDETQLVTDVSGAGNNWAVGYHQYGHQY 81 (379)
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHCCC-CCEEEEECCCCHHHHHHCCCCCCCCCCCCEEECCCCCCHHHHCCCCCCCHHH
T ss_conf 899944785889999999999971374-3379998881168888557641447821166479985021114010321989
Q ss_pred HHHHHHHHHHHHCCCCE---EEEEECCCCCCCCCHHHHHHHHHHHC--CCEEEEEEECCCCCCCHH--HHHHHHHHHHHH
Q ss_conf 99729999997269989---99980367666740789999999864--984999950430004067--888899999999
Q gi|254781176|r 85 AEECIDEITEMLDKTHM---CFVTAGMGGGTGTGAAPIIAKIARNK--GVLTVGVVTKPFHFEGSR--RMRVAESGIEAL 157 (502)
Q Consensus 85 a~~~~~~i~~~~~~~~~---~~~~ag~gggtgtg~~p~ia~~a~~~--~~~~~~~v~~pf~~eg~~--r~~~a~~~~~~l 157 (502)
T Consensus 82 ~d~i~d~IrkevE~CD~l~Gf~~~hSl~GGTGSGlGs~l~e~L~d~ypk~~i~~~~V~Ps~~-~~vvvqpYNsvLsl~~L 160 (379)
T cd02190 82 IDSILEKIRKAAEKCDSLQSFFILHSLGGGTGSGLGTYVLELLADEFPEVYRFVTSVYPSAD-DDVITSPYNSVLALREL 160 (379)
T ss_pred HHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCC-CCCCCCCCHHHHHHHHH
T ss_conf 99999999999971699676457730488776518888789889766985140258516889-98413254778778888
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCE-EEEEEEECCC
Q ss_conf 986333545027888741366531899974467999999888887651665555898787876415865-8998761486
Q gi|254781176|r 158 QETVDTLIVIPNQNLFRIANDKTTFADAFSMADQVLYSGVSCITDLMIKEGLINLDFADVRSVMRNMGR-AMMGTGEASG 236 (502)
Q Consensus 158 ~~~~d~~i~i~n~~l~~~~~~~~~~~~af~~~d~~l~~~v~~i~~~i~~~g~in~df~d~~~v~~~~g~-a~~g~g~~~g 236 (502)
T Consensus 161 ~e~sD~i~~~dN~al~-----------~~~~iN~~Ia~~ls~~t~~~Rf~g~~n~~l~~l~~nLvP~P~~~fl~~s~~P~ 229 (379)
T cd02190 161 IEHADCVLPIENQALV-----------PFDAMNSIVANLLLNLTSSMRFEGSLNVDLNEITMNLVPFPRLHFLVSSLSPL 229 (379)
T ss_pred HHCCCEEEEEEHHHHH-----------HHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCEEEEEEECCC
T ss_conf 7407479994156543-----------14777899999975035534268645888889965569986625455200355
Q ss_pred ---------CCHHHHHHHHHHHC--CCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCC
Q ss_conf ---------20489999887527--01000224555378999616888899999999999997416
Q gi|254781176|r 237 ---------HGRGIQAAEAAVAN--PLLDEASMKGSQGLLISITGGSDLTLFEVDEAATRIREEVD 291 (502)
Q Consensus 237 ---------~~r~~~a~~~a~~~--pll~~~~~~~a~~~l~~i~~~~~~~l~e~~~~~~~i~~~~~ 291 (502)
T Consensus 230 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~~ls~~~~~RG~~~~~~~~~~~~~~~~~~~ 294 (379)
T cd02190 230 YPLADVNVPPRRLDQMFSDAFSRNHQLI-RADPKHGLYLACALLVRGNVSVSDLRRNIERLKPKLK 294 (379)
T ss_pred CCHHHHCCCCCCHHHHHHHHHCCCCCEE-EECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC
T ss_conf 6444403446669999999738000377-4078886201458776079877999999999861303