HHsearch alignment for GI: 254781176 and conserved domain: cd05291
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=95.78 E-value=0.081 Score=32.77 Aligned_cols=105 Identities=18% Similarity=0.279 Sum_probs=63.3
Q ss_pred CEEEEEEECCCHHHHHHHHHHCCCCC-CEEEEECCC---HHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 61799996681479999999858998-449998255---78855189970485155425567888883899999997299
Q gi|254781176|r 15 PRITVFGVGGGGGNAVNNMVSSGLQG-VNFVVANTD---AQALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAEECID 90 (502)
Q Consensus 15 ~~i~v~g~gg~g~n~~~~~~~~~~~~-~~~~~~ntd---~~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~~~ 90 (502)
T Consensus 1 rKI~IIGaG~VG~~~a~~l~~~~l~~el~L~Di~~~~a~G~a~DL~~~~~~~--~~~-~~i-~-~~~~------------ 63 (306)
T cd05291 1 RKVVIIGAGHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFL--PSP-VKI-K-AGDY------------ 63 (306)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHC--CCC-EEE-E-ECCH------------
T ss_conf 9599999698899999999857998779998189870176999887013305--997-399-6-0887------------
Q ss_pred HHHHHHCCCCEEEEEECCCCCCCCC-------HHHHHHHHHHHC-----CCEEEEEEECCCC
Q ss_conf 9999726998999980367666740-------789999999864-----9849999504300
Q gi|254781176|r 91 EITEMLDKTHMCFVTAGMGGGTGTG-------AAPIIAKIARNK-----GVLTVGVVTKPFH 140 (502)
Q Consensus 91 ~i~~~~~~~~~~~~~ag~gggtgtg-------~~p~ia~~a~~~-----~~~~~~~v~~pf~ 140 (502)
T Consensus 64 ---~~~~~aDvvVitAG~~rk~g~~R~dLl~~N~~I~k~i~~~i~~~~p~ai-vivvtNPvD 121 (306)
T cd05291 64 ---SDCKDADIVVITAGAPQKPGETRLDLLEKNAKIMKSIVPKIKASGFDGI-FLVASNPVD 121 (306)
T ss_pred ---HHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCE-EEEECCCHH
T ss_conf ---8847899999906766799998789999789999999999872299718-999358167