HHsearch alignment for GI: 254781176 and conserved domain: cd05292
>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=95.88 E-value=0.11 Score=31.79 Aligned_cols=103 Identities=18% Similarity=0.283 Sum_probs=65.1
Q ss_pred EEEEEEECCCHHHHHHHHHHCCCCC-CEEEEECCC---HHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 1799996681479999999858998-449998255---788551899704851554255678888838999999972999
Q gi|254781176|r 16 RITVFGVGGGGGNAVNNMVSSGLQG-VNFVVANTD---AQALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAEECIDE 91 (502)
Q Consensus 16 ~i~v~g~gg~g~n~~~~~~~~~~~~-~~~~~~ntd---~~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~~~~ 91 (502)
T Consensus 2 KI~IIGaG~VG~~~A~~l~~~~l~~el~L~Di~~~~a~g~a~DL~~a~~~--~~~~---~i~~-~~~------------- 62 (308)
T cd05292 2 KVAIVGAGFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPF--VKPV---RIYA-GDY------------- 62 (308)
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHCCC--CCCC---EEEE-CCH-------------
T ss_conf 79999948889999999986799887999918898451256876624103--6881---6840-999-------------
Q ss_pred HHHHHCCCCEEEEEECCCCCCCCC-------HHHHHHHHHHHC-----CCEEEEEEECCCC
Q ss_conf 999726998999980367666740-------789999999864-----9849999504300
Q gi|254781176|r 92 ITEMLDKTHMCFVTAGMGGGTGTG-------AAPIIAKIARNK-----GVLTVGVVTKPFH 140 (502)
Q Consensus 92 i~~~~~~~~~~~~~ag~gggtgtg-------~~p~ia~~a~~~-----~~~~~~~v~~pf~ 140 (502)
T Consensus 63 --~~l~daDvVVitaG~~rk~g~tR~dll~~Na~I~~~i~~~i~~~~p~~i-vivvsNPvD 120 (308)
T cd05292 63 --ADCKGADVVVITAGANQKPGETRLDLLKRNVAIFKEIIPQILKYAPDAI-LLVVTNPVD 120 (308)
T ss_pred --HHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCE-EEECCCCHH
T ss_conf --9977999999899999998998789998889999999999984199808-997279547