HHsearch alignment for GI: 254781176 and conserved domain: pfam00899
>pfam00899 ThiF ThiF family. This family contains a repeated domain in ubiquitin activating enzyme E1 and members of the bacterial ThiF/MoeB/HesA family.
Probab=94.96 E-value=0.25 Score=29.17 Aligned_cols=107 Identities=18% Similarity=0.322 Sum_probs=61.7
Q ss_pred CEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHH-------
Q ss_conf 6179999668147999999985899844999825578855189970485155425567888883899999997-------
Q gi|254781176|r 15 PRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDAQALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAEE------- 87 (502)
Q Consensus 15 ~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~------- 87 (502)
T Consensus 2 skVlivG~GglG~~~~~~La~~Gvg--~i~lvD~D~--ve~sNL~Rq~l~~~~d---iG~-~Ka~~~~~~l~~~np~~~i 73 (134)
T pfam00899 2 SRVLVVGAGGLGSPAAEYLARAGVG--KLTLVDFDT--VELSNLNRQILFTESD---IGK-PKAEVAKERLRAINPDVEV 73 (134)
T ss_pred CEEEEECCCHHHHHHHHHHHHHCCC--EEEEEECCC--CCCCCCCCEEECCHHH---CCC-EEHHHHHHHHHHHCCCCEE
T ss_conf 8899989888999999999993897--499998956--7632227224233646---688-1079999999977899589
Q ss_pred -------HHHHHHHHHCCCCEEEEEECCCCCCCCCHH-HHHHHHHHHCCCEEEEEE
Q ss_conf -------299999972699899998036766674078-999999986498499995
Q gi|254781176|r 88 -------CIDEITEMLDKTHMCFVTAGMGGGTGTGAA-PIIAKIARNKGVLTVGVV 135 (502)
Q Consensus 88 -------~~~~i~~~~~~~~~~~~~ag~gggtgtg~~-p~ia~~a~~~~~~~~~~v 135 (502)
T Consensus 74 ~~~~~~i~~~~~~~~~~~~DvVi~~------~Dn~~~r~~ln~~c~~~~ip~i~~~ 123 (134)
T pfam00899 74 EAYPERLTPENLEELLKGADLVVDA------LDNFAARYLLNDACVKRGIPLISAG 123 (134)
T ss_pred EEEECCCCHHHHHHCCCCCCEEEEC------CCCHHHHHHHHHHHHHCCCCEEEEE
T ss_conf 9992567977876426448899999------8999999999999998599899955