HHsearch results for GI: 254781176 and protein with PDBid: 1b8p_A
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=93.40 E-value=0.21 Score=28.09 Aligned_cols=75 Identities=11% Similarity=0.127 Sum_probs=48.1
Q ss_pred EEEEEEE-CCCHHHHHHHHHHCCCCC----CEEEEECCC---------HHH--HHHCCCC--EEEEECCCCCCCCCCCCC
Q ss_conf 1799996-681479999999858998----449998255---------788--5518997--048515542556788888
Q gi|254781176|r 16 RITVFGV-GGGGGNAVNNMVSSGLQG----VNFVVANTD---------AQA--LMMSKAK--QIIQLGSGITEGLGAGSH 77 (502)
Q Consensus 16 ~i~v~g~-gg~g~n~~~~~~~~~~~~----~~~~~~ntd---------~~~--l~~~~~~--~~~~~g~~~~~g~g~g~~ 77 (502)
||.|+|- |+-|......+....+.+ +++..++.. .++ |..+..+ ..+.++
T Consensus 7 KV~IiGA~G~vG~~la~~l~~~~l~~~~~~~~L~L~Di~~~~a~~~l~g~a~DL~~~~~~~~~~~~~~------------ 74 (329)
T 1b8p_A 7 RVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLLAGMTAH------------ 74 (329)
T ss_dssp EEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTEEEEEEE------------
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHCCCCCCEEEHHHHCCCCCCCCEEEC------------
T ss_conf 89998989789999999998376468996689999767862212300423525665576566886966------------
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC
Q ss_conf 3899999997299999972699899998036766674
Q gi|254781176|r 78 PEVGRAAAEECIDEITEMLDKTHMCFVTAGMGGGTGT 114 (502)
Q Consensus 78 ~~~g~~~a~~~~~~i~~~~~~~~~~~~~ag~gggtgt 114 (502)
....+.|.++|+|+|+||..-.-|.
T Consensus 75 ------------~~~~~~l~~advVvitag~~~~~g~ 99 (329)
T 1b8p_A 75 ------------ADPMTAFKDADVALLVGARPRGPGM 99 (329)
T ss_dssp ------------SSHHHHTTTCSEEEECCCCCCCTTC
T ss_pred ------------CCCHHHHCCCCEEEEECCCCCCCCC
T ss_conf ------------8858986678879996078889998