HHsearch results for GI: 254781176 and protein with PDBid: 1p3d_A
>1p3d_A UDP-N-acetylmuramate--alanine ligase; alpha/beta protein; HET: UMA ANP; 1.70A {Haemophilus influenzae} SCOP: c.5.1.1 c.59.1.1 c.72.2.1 PDB: 1gqq_A* 1p31_A* 1gqy_A*
Probab=93.22 E-value=0.28 Score=27.16 Aligned_cols=46 Identities=24% Similarity=0.464 Sum_probs=26.9
Q ss_pred CEEEEEEECCCHHHHHHHHH-HCCCCCCEEEEEC----CCHHHHHHCCCCEEEEEC
Q ss_conf 61799996681479999999-8589984499982----557885518997048515
Q gi|254781176|r 15 PRITVFGVGGGGGNAVNNMV-SSGLQGVNFVVAN----TDAQALMMSKAKQIIQLG 65 (502)
Q Consensus 15 ~~i~v~g~gg~g~n~~~~~~-~~~~~~~~~~~~n----td~~~l~~~~~~~~~~~g 65 (502)
-||.+||+||.|..++-++. +.|.. ....+ .-.+.|.... .++.+|
T Consensus 19 k~i~~iGiggsG~s~lA~~l~~~G~~---V~~~D~~~~~~~~~L~~~g--i~~~~g 69 (475)
T 1p3d_A 19 QQIHFIGIGGAGMSGIAEILLNEGYQ---ISGSDIADGVVTQRLAQAG--AKIYIG 69 (475)
T ss_dssp CEEEEETTTSTTHHHHHHHHHHHTCE---EEEEESCCSHHHHHHHHTT--CEEEES
T ss_pred CEEEEEEECHHHHHHHHHHHHHCCCE---EEEEECCCCHHHHHHHHCC--CEEECC
T ss_conf 77999984699999999999968894---9999089997999999787--999879