HHsearch results for GI: 254781176 and protein with PDBid: 1y6j_A

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=94.71  E-value=0.098  Score=30.54  Aligned_cols=105  Identities=17%  Similarity=0.231  Sum_probs=64.8

Q ss_pred             CCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCC-----HHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf             861799996681479999999858998449998255-----788551899704851554255678888838999999972
Q gi|254781176|r   14 KPRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTD-----AQALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAEEC   88 (502)
Q Consensus        14 ~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd-----~~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~   88 (502)
                      ++||.|||.|.-|......+...++.+ +++.++.+     .++++.+.+--  .++..  +..  .++.          
T Consensus         7 ~~KV~IiGaG~VG~~~a~~l~~~~~~~-el~L~Di~~~~~~g~a~DL~~~~~--~~~~~--~~~--~~~~----------   69 (318)
T 1y6j_A            7 RSKVAIIGAGFVGASAAFTMALRQTAN-ELVLIDVFKEKAIGEAMDINHGLP--FMGQM--SLY--AGDY----------   69 (318)
T ss_dssp             CCCEEEECCSHHHHHHHHHHHHTTCSS-EEEEECCC---CCHHHHHHTTSCC--CTTCE--EEC----CG----------
T ss_pred             CCCEEEECCCHHHHHHHHHHHHCCCCC-EEEEEECCCCHHHHHHHHHHCCCC--CCCCC--EEC--CCCH----------
T ss_conf             993899897989999999998279998-699990789707999999866575--68985--430--4887----------


Q ss_pred             HHHHHHHHCCCCEEEEEECCCCCCCCC-------HHHHHHHHHHHC----CCEEEEEEECCCC
Q ss_conf             999999726998999980367666740-------789999999864----9849999504300
Q gi|254781176|r   89 IDEITEMLDKTHMCFVTAGMGGGTGTG-------AAPIIAKIARNK----GVLTVGVVTKPFH  140 (502)
Q Consensus        89 ~~~i~~~~~~~~~~~~~ag~gggtgtg-------~~p~ia~~a~~~----~~~~~~~v~~pf~  140 (502)
                           +.|.|+|+|+||||..-..|.-       -++++.++++..    ---.+.|||-|-+
T Consensus        70 -----~~~~~advvvitag~~rk~g~~R~dll~~Na~I~~~~~~~i~~~~p~~iv~vvsNPvd  127 (318)
T 1y6j_A           70 -----SDVKDCDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVSNPVD  127 (318)
T ss_dssp             -----GGGTTCSEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECSSSHH
T ss_pred             -----HHHCCCCEEEECCCCCCCCCCCHHHHHHHCHHHHHHHHHHHHHCCCCCEEEEECCCCH
T ss_conf             -----8847888899728988999998778876566899999877642367728998079607