HHsearch results for GI: 254781176 and protein with PDBid: 3fi9_A
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Porphyromonas gingivalis atcc 33277}
Probab=94.13 E-value=0.16 Score=29.01 Aligned_cols=75 Identities=21% Similarity=0.256 Sum_probs=47.2
Q ss_pred CCEEEEEE-ECCCHHHHHHHHHHCCCCCCEEEEECCCHH-----H--HHHCCCC-EEEEECCCCCCCCCCCCCHHHHHHH
Q ss_conf 86179999-668147999999985899844999825578-----8--5518997-0485155425567888883899999
Q gi|254781176|r 14 KPRITVFG-VGGGGGNAVNNMVSSGLQGVNFVVANTDAQ-----A--LMMSKAK-QIIQLGSGITEGLGAGSHPEVGRAA 84 (502)
Q Consensus 14 ~~~i~v~g-~gg~g~n~~~~~~~~~~~~~~~~~~ntd~~-----~--l~~~~~~-~~~~~g~~~~~g~g~g~~~~~g~~~ 84 (502)
+.||.||| .|.-|..+...+...++. -+++.++.+.. + |..+..+ ..+.+ + .+
T Consensus 8 ~~KV~IiGaaG~VG~~~a~~l~~~~l~-~el~L~D~~~~~~~G~a~DL~~~~~~~~~~~~----~------~~------- 69 (343)
T 3fi9_A 8 EEKLTIVGAAGMIGSNMAQTAAMMRLT-PNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTF----T------SD------- 69 (343)
T ss_dssp SSEEEEETTTSHHHHHHHHHHHHTTCC-SCEEEECSCHHHHHHHHHHHHHHCCTTCCCEE----E------SC-------
T ss_pred CCCEEEECCCCHHHHHHHHHHHHCCCC-CEEEEECCCCCCCCHHHHHHHHCCCCCCCEEE----E------CC-------
T ss_conf 982899968867999999999837998-87999788777542223764533867887076----0------88-------
Q ss_pred HHHHHHHHHHHHCCCCEEEEEECCCCCCC
Q ss_conf 99729999997269989999803676667
Q gi|254781176|r 85 AEECIDEITEMLDKTHMCFVTAGMGGGTG 113 (502)
Q Consensus 85 a~~~~~~i~~~~~~~~~~~~~ag~gggtg 113 (502)
..+.|.|+|+|+||||.--..|
T Consensus 70 -------~~~~l~daDiVVitAG~~rkpg 91 (343)
T 3fi9_A 70 -------IKEALTDAKYIVSSGGAPRKEG 91 (343)
T ss_dssp -------HHHHHTTEEEEEECCC------
T ss_pred -------HHHHHCCCCEEEECCCCCCCCC
T ss_conf -------6898279879998688789999