HHsearch results for GI: 254781176 and protein with PDBid: 3gvi_A
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=93.17 E-value=0.16 Score=29.04 Aligned_cols=99 Identities=16% Similarity=0.248 Sum_probs=61.7
Q ss_pred CCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCC-----HHHHHHC------CCCEEEEECCCCCCCCCCCCCHHHHH
Q ss_conf 861799996681479999999858998449998255-----7885518------99704851554255678888838999
Q gi|254781176|r 14 KPRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTD-----AQALMMS------KAKQIIQLGSGITEGLGAGSHPEVGR 82 (502)
Q Consensus 14 ~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd-----~~~l~~~------~~~~~~~~g~~~~~g~g~g~~~~~g~ 82 (502)
++||.|||.|.-|..+...+...++. +++.++.+ .++++.+ ....++.- +++
T Consensus 7 ~~KV~IiGaG~VG~~~a~~l~~~~l~--el~L~Di~~~~a~g~a~DL~~~~~~~~~~~~~~~----------~~~----- 69 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGLKELG--DVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTG----------AND----- 69 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCC--EEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEE----------ESS-----
T ss_pred CCEEEEECCCHHHHHHHHHHHCCCCC--EEEEECCCCCCCCCHHHHHHHHCCCCCCCCEEEC----------CCC-----
T ss_conf 88799989798999999999639998--8999848998550386754433536788865816----------886-----
Q ss_pred HHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCC-------HHHHHHHHHHHC-----CCEEEEEEECCCC
Q ss_conf 999972999999726998999980367666740-------789999999864-----9849999504300
Q gi|254781176|r 83 AAAEECIDEITEMLDKTHMCFVTAGMGGGTGTG-------AAPIIAKIARNK-----GVLTVGVVTKPFH 140 (502)
Q Consensus 83 ~~a~~~~~~i~~~~~~~~~~~~~ag~gggtgtg-------~~p~ia~~a~~~-----~~~~~~~v~~pf~ 140 (502)
.+.++++|+|+|+||..-..|.- -++++.++++.. .. .+.|||-|-+
T Consensus 70 ----------~~~~~~adivvitag~~~k~g~~R~dll~~N~~I~~~~~~~i~~~~p~~-ivivvsNPvd 128 (324)
T 3gvi_A 70 ----------YAAIEGADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEA-FVICITNPLD 128 (324)
T ss_dssp ----------GGGGTTCSEEEECCSCCCC-----CHHHHHHHHHHHHHHHHHHHHCTTC-EEEECCSSHH
T ss_pred ----------HHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC-EEEEECCCHH
T ss_conf ----------7885587189984367899999889999989999999999999669981-8999469717