Query gi|254781176|ref|YP_003065589.1| cell division protein FtsZ [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 502
No_of_seqs 294 out of 1577
Neff 7.8
Searched_HMMs 23785
Date Wed Jun 1 01:42:11 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254781176.hhm -d /home/congqian_1/database/pdb/pdb70.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2vaw_A FTSZ, cell division pro 100.0 0 0 876.3 33.1 310 13-322 10-319 (394)
2 1rq2_A Cell division protein F 100.0 0 0 828.3 35.5 311 11-322 8-318 (382)
3 2vxy_A FTSZ, cell division pro 100.0 0 0 818.8 35.1 311 11-322 8-318 (382)
4 1ofu_A FTSZ, cell division pro 100.0 0 0 790.5 34.2 310 13-322 10-319 (320)
5 2vap_A FTSZ, cell division pro 100.0 0 0 784.4 36.1 311 11-323 34-344 (364)
6 1w5f_A Cell division protein F 100.0 0 0 770.3 34.2 316 7-323 13-332 (353)
7 2r75_1 Cell division protein F 100.0 0 0 731.1 35.2 311 14-324 7-317 (338)
8 3m89_A FTSZ/tubulin-related pr 100.0 0 0 426.8 19.5 310 9-322 37-402 (427)
9 1tvk_A Tubulin alpha chain; ep 99.2 1.4E-10 6E-15 95.8 11.5 206 17-222 4-260 (440)
10 2btq_B Tubulin btubb; structur 99.2 2.7E-10 1.1E-14 93.8 12.6 206 17-222 4-258 (426)
11 2bto_A Tubulin btuba; bacteria 99.2 2.1E-10 8.8E-15 94.6 11.3 207 16-222 5-264 (473)
12 3cb2_A Gamma-1-tubulin, tubuli 99.1 8.8E-10 3.7E-14 90.0 11.3 267 17-289 5-343 (475)
13 1tvk_B Tubulin beta chain; epo 98.8 1.1E-08 4.4E-13 82.0 6.3 270 17-289 4-336 (427)
14 1obb_A Maltase, alpha-glucosid 96.9 0.003 1.3E-07 41.7 7.5 76 14-113 3-92 (480)
15 3fef_A Putative glucosidase LP 96.6 0.011 4.8E-07 37.5 8.1 133 14-178 5-148 (450)
16 1mld_A Malate dehydrogenase; o 96.5 0.021 8.8E-07 35.5 9.4 100 15-139 1-120 (314)
17 3p7m_A Malate dehydrogenase; p 96.2 0.019 8E-07 35.8 7.6 99 14-140 5-126 (321)
18 1t2d_A LDH-P, L-lactate dehydr 96.1 0.0063 2.7E-07 39.3 4.9 100 14-140 4-130 (322)
19 1smk_A Malate dehydrogenase, g 96.1 0.05 2.1E-06 32.7 9.4 103 14-140 6-129 (326)
20 1pzg_A LDH, lactate dehydrogen 95.8 0.056 2.3E-06 32.4 8.6 100 14-140 9-136 (331)
21 1s6y_A 6-phospho-beta-glucosid 95.8 0.02 8.6E-07 35.6 6.2 115 14-162 7-137 (450)
22 3ic5_A Putative saccharopine d 95.7 0.11 4.7E-06 30.1 9.7 93 13-132 4-97 (118)
23 1ldn_A L-lactate dehydrogenase 95.6 0.14 5.8E-06 29.4 9.9 102 14-140 6-127 (316)
24 2zcu_A Uncharacterized oxidore 95.5 0.1 4.3E-06 30.4 8.7 102 17-140 2-107 (286)
25 1guz_A Malate dehydrogenase; o 95.4 0.017 7.3E-07 36.1 4.5 105 16-140 2-122 (310)
26 2hjr_A Malate dehydrogenase; m 95.1 0.16 6.7E-06 29.0 8.9 100 14-140 14-135 (328)
27 1ur5_A Malate dehydrogenase; o 95.1 0.12 4.9E-06 30.0 8.3 100 14-140 2-123 (309)
28 2zqz_A L-LDH, L-lactate dehydr 95.1 0.085 3.6E-06 31.0 7.5 105 14-140 9-129 (326)
29 1a5z_A L-lactate dehydrogenase 95.1 0.16 6.6E-06 29.0 8.7 98 16-140 2-120 (319)
30 2yva_A DNAA initiator-associat 95.0 0.089 3.7E-06 30.8 7.3 120 15-171 42-167 (196)
31 2ldx_A APO-lactate dehydrogena 95.0 0.038 1.6E-06 33.6 5.4 101 14-140 19-140 (331)
32 3d0o_A L-LDH 1, L-lactate dehy 94.9 0.21 8.8E-06 28.1 11.0 99 14-140 6-127 (317)
33 1hyh_A L-hicdh, L-2-hydroxyiso 94.8 0.059 2.5E-06 32.2 5.9 98 15-140 2-126 (309)
34 1y6j_A L-lactate dehydrogenase 94.7 0.098 4.1E-06 30.5 6.9 105 14-140 7-127 (318)
35 3e48_A Putative nucleoside-dip 94.6 0.24 1E-05 27.6 10.2 100 16-136 2-105 (289)
36 1y8q_A Ubiquitin-like 1 activa 94.6 0.057 2.4E-06 32.3 5.5 35 14-50 36-70 (346)
37 1up7_A 6-phospho-beta-glucosid 94.4 0.24 1E-05 27.7 8.4 139 14-178 2-143 (417)
38 1oju_A MDH, malate dehydrogena 94.4 0.27 1.1E-05 27.2 10.9 99 16-140 2-122 (294)
39 1tk9_A Phosphoheptose isomeras 94.3 0.3 1.2E-05 27.0 10.4 118 14-171 42-165 (188)
40 2v7p_A L-lactate dehydrogenase 94.3 0.3 1.2E-05 27.0 10.1 102 16-140 2-120 (310)
41 1y7t_A Malate dehydrogenase; N 94.2 0.12 4.8E-06 30.0 6.4 108 14-141 3-135 (327)
42 3h5n_A MCCB protein; ubiquitin 94.2 0.15 6.3E-06 29.2 7.0 101 13-132 117-238 (353)
43 3nep_X Malate dehydrogenase; h 94.2 0.013 5.5E-07 37.0 1.5 98 16-140 2-122 (314)
44 3fi9_A Malate dehydrogenase; s 94.1 0.16 6.6E-06 29.0 6.9 75 14-113 8-91 (343)
45 1o6z_A MDH, malate dehydrogena 94.1 0.21 8.9E-06 28.1 7.5 97 16-139 2-122 (303)
46 1hye_A L-lactate/malate dehydr 94.0 0.28 1.2E-05 27.2 8.0 100 16-140 2-126 (313)
47 1lld_A L-lactate dehydrogenase 94.0 0.093 3.9E-06 30.7 5.5 104 14-138 7-126 (319)
48 3h8v_A Ubiquitin-like modifier 93.8 0.24 1E-05 27.6 7.4 101 13-132 35-166 (292)
49 2axq_A Saccharopine dehydrogen 93.8 0.36 1.5E-05 26.3 11.5 99 7-133 16-117 (467)
50 1ez4_A Lactate dehydrogenase; 93.6 0.24 1E-05 27.7 7.0 99 14-140 5-125 (318)
51 2v65_A LDH-A, L-lactate dehydr 93.6 0.13 5.3E-06 29.7 5.6 105 14-140 20-140 (331)
52 2v6b_A L-LDH, L-lactate dehydr 93.5 0.29 1.2E-05 27.0 7.4 102 16-140 2-120 (304)
53 1b8p_A Protein (malate dehydro 93.4 0.21 8.8E-06 28.1 6.5 75 16-114 7-99 (329)
54 1hdo_A Biliverdin IX beta redu 93.3 0.43 1.8E-05 25.8 8.2 106 14-141 3-115 (206)
55 1p3d_A UDP-N-acetylmuramate--a 93.2 0.28 1.2E-05 27.2 6.9 46 15-65 19-69 (475)
56 3gvi_A Malate dehydrogenase; N 93.2 0.16 6.6E-06 29.0 5.5 99 14-140 7-128 (324)
57 1vjt_A Alpha-glucosidase; TM07 93.0 0.034 1.4E-06 33.9 2.0 146 14-178 12-173 (483)
58 3e8x_A Putative NAD-dependent 93.0 0.39 1.6E-05 26.1 7.2 113 5-142 14-136 (236)
59 6ldh_A M4 APO-lactate dehydrog 92.7 0.29 1.2E-05 27.0 6.3 104 16-140 23-142 (330)
60 1u8x_X Maltose-6'-phosphate gl 92.6 0.4 1.7E-05 26.1 6.9 140 16-178 30-173 (472)
61 2d4a_B Malate dehydrogenase; a 92.5 0.024 1E-06 35.1 0.6 96 17-140 2-120 (308)
62 1x92_A APC5045, phosphoheptose 92.3 0.14 5.9E-06 29.4 4.2 121 14-171 45-171 (199)
63 2nvu_B Maltose binding protein 91.9 0.49 2E-05 25.4 6.7 115 175-298 354-485 (805)
64 2x5o_A UDP-N-acetylmuramoylala 91.6 0.36 1.5E-05 26.3 5.8 85 15-132 6-92 (439)
65 2hmt_A YUAA protein; RCK, KTN, 91.5 0.69 2.9E-05 24.3 9.4 95 14-134 6-102 (144)
66 1jw9_B Molybdopterin biosynthe 91.4 0.71 3E-05 24.2 9.1 103 14-132 31-150 (249)
67 2xbl_A Phosphoheptose isomeras 91.1 0.76 3.2E-05 24.0 10.3 113 14-171 48-171 (198)
68 2z2v_A Hypothetical protein PH 91.1 0.76 3.2E-05 24.0 8.7 94 11-134 13-107 (365)
69 2ewd_A Lactate dehydrogenase,; 90.7 0.03 1.2E-06 34.4 -0.6 100 14-140 4-125 (317)
70 1zud_1 Adenylyltransferase THI 90.3 0.31 1.3E-05 26.9 4.4 102 14-131 28-146 (251)
71 1ff9_A Saccharopine reductase; 90.1 0.91 3.8E-05 23.4 9.4 94 14-134 3-98 (450)
72 3hhp_A Malate dehydrogenase; M 90.1 0.36 1.5E-05 26.3 4.6 76 16-113 2-84 (312)
73 1tt5_A APPBP1, amyloid protein 89.7 0.13 5.7E-06 29.5 2.1 102 14-134 32-155 (531)
74 1xq6_A Unknown protein; struct 89.3 1.1 4.4E-05 22.9 7.7 81 14-114 4-85 (253)
75 2i2w_A Phosphoheptose isomeras 89.0 1.1 4.6E-05 22.8 8.3 116 14-169 64-184 (212)
76 1y8q_B Anthracycline-, ubiquit 89.0 0.22 9.4E-06 27.9 2.9 53 14-66 17-70 (640)
77 3ktd_A Prephenate dehydrogenas 88.8 0.74 3.1E-05 24.0 5.4 45 8-55 2-46 (341)
78 1tt5_B Ubiquitin-activating en 88.1 0.38 1.6E-05 26.2 3.5 42 14-55 40-82 (434)
79 3cvj_A Putative phosphoheptose 88.1 0.98 4.1E-05 23.2 5.7 98 96-201 106-212 (243)
80 1j6u_A UDP-N-acetylmuramate-al 87.9 1.3 5.4E-05 22.3 7.5 90 7-132 5-99 (469)
81 3dhn_A NAD-dependent epimerase 85.5 1.7 7.1E-05 21.4 8.8 100 14-135 4-110 (227)
82 3dzb_A Prephenate dehydrogenas 85.3 0.25 1.1E-05 27.5 1.4 41 14-55 5-45 (317)
83 2rir_A Dipicolinate synthase, 85.1 0.69 2.9E-05 24.3 3.6 25 15-39 8-32 (300)
84 2g1u_A Hypothetical protein TM 84.8 1.8 7.6E-05 21.2 9.7 100 11-138 16-121 (155)
85 3d4o_A Dipicolinate synthase s 84.5 1.3 5.3E-05 22.3 4.7 25 15-39 6-30 (293)
86 1x13_A NAD(P) transhydrogenase 84.2 1 4.4E-05 23.0 4.1 14 291-304 253-266 (401)
87 5mdh_A Malate dehydrogenase; o 84.0 1.1 4.6E-05 22.8 4.2 74 16-113 5-94 (333)
88 3hn2_A 2-dehydropantoate 2-red 83.8 2 8.3E-05 20.9 6.0 39 16-56 4-42 (312)
89 2hqb_A Transcriptional activat 83.3 2 8.5E-05 20.8 5.3 32 90-128 54-86 (296)
90 1vpd_A Tartronate semialdehyde 82.9 0.99 4.2E-05 23.1 3.6 179 16-223 7-212 (299)
91 3k96_A Glycerol-3-phosphate de 82.7 0.76 3.2E-05 24.0 2.9 56 12-68 27-83 (356)
92 1xgk_A Nitrogen metabolite rep 82.3 2.3 9.5E-05 20.5 7.3 102 13-134 4-109 (352)
93 3ktn_A Carbohydrate kinase, PF 82.2 2.3 9.5E-05 20.5 5.9 150 19-174 30-205 (346)
94 2g5c_A Prephenate dehydrogenas 82.1 1.5 6.2E-05 21.9 4.2 154 16-194 3-200 (281)
95 2uyy_A N-PAC protein; long-cha 81.5 0.74 3.1E-05 24.1 2.5 187 10-224 26-238 (316)
96 2i6t_A Ubiquitin-conjugating e 81.1 2.5 0.0001 20.2 6.8 97 16-140 16-129 (303)
97 3dqp_A Oxidoreductase YLBE; al 79.6 2.8 0.00012 19.8 8.6 100 16-137 2-106 (219)
98 2rcy_A Pyrroline carboxylate r 79.4 2.8 0.00012 19.8 5.3 187 16-232 6-235 (262)
99 2b69_A UDP-glucuronate decarbo 79.3 2.5 0.0001 20.2 4.6 47 240-299 244-290 (343)
100 2h78_A Hibadh, 3-hydroxyisobut 79.0 2.6 0.00011 20.0 4.6 37 15-54 4-40 (302)
101 2ph5_A Homospermidine synthase 78.9 1.4 5.8E-05 22.0 3.2 108 10-139 9-118 (480)
102 2f00_A UDP-N-acetylmuramate--L 78.7 2.9 0.00012 19.7 9.3 115 16-140 21-160 (491)
103 1gpj_A Glutamyl-tRNA reductase 78.6 1.8 7.5E-05 21.2 3.7 34 138-175 73-106 (404)
104 3fxa_A SIS domain protein; YP_ 77.9 3.1 0.00013 19.5 5.5 100 14-172 45-148 (201)
105 3hn7_A UDP-N-acetylmuramate-L- 77.1 3.2 0.00014 19.3 6.5 90 6-132 13-108 (524)
106 3ggo_A Prephenate dehydrogenas 76.5 2.8 0.00012 19.8 4.2 153 16-193 35-231 (314)
107 3cky_A 2-hydroxymethyl glutara 75.8 3.1 0.00013 19.5 4.3 175 16-224 6-212 (301)
108 3l6d_A Putative oxidoreductase 75.6 1.2 5E-05 22.5 2.1 41 10-53 5-45 (306)
109 2o3j_A UDP-glucose 6-dehydroge 75.5 3.5 0.00015 19.0 12.7 209 15-236 10-280 (481)
110 2ajr_A Sugar kinase, PFKB fami 75.3 3.6 0.00015 19.0 10.2 113 18-133 46-181 (331)
111 1yqg_A Pyrroline-5-carboxylate 74.4 2.2 9E-05 20.6 3.2 181 16-230 2-231 (263)
112 1vim_A Hypothetical protein AF 74.1 3.7 0.00015 18.9 4.3 56 97-170 88-143 (200)
113 2f1k_A Prephenate dehydrogenas 74.1 2.9 0.00012 19.6 3.8 37 16-55 2-38 (279)
114 7mdh_A Protein (malate dehydro 74.0 3.8 0.00016 18.8 11.7 108 9-140 25-162 (375)
115 3gt0_A Pyrroline-5-carboxylate 73.9 1.2 5E-05 22.5 1.8 41 15-55 3-44 (247)
116 2gf2_A Hibadh, 3-hydroxyisobut 73.8 2.8 0.00012 19.8 3.7 168 16-224 2-208 (296)
117 2w7t_A CTP synthetase, putativ 73.7 3.9 0.00016 18.7 4.4 45 90-135 59-103 (273)
118 2wm3_A NMRA-like family domain 73.7 3.9 0.00016 18.7 5.6 103 14-137 5-115 (299)
119 1weh_A Conserved hypothetical 73.3 3.9 0.00016 18.7 4.3 83 91-186 24-115 (171)
120 3c7a_A Octopine dehydrogenase; 72.6 0.26 1.1E-05 27.5 -1.9 83 15-106 3-90 (404)
121 2p4q_A 6-phosphogluconate dehy 72.3 4.2 0.00018 18.5 5.2 99 15-134 11-133 (497)
122 2bka_A CC3, TAT-interacting pr 72.2 4.2 0.00018 18.5 5.3 109 13-141 17-136 (242)
123 2vns_A Metalloreductase steap3 71.7 2.3 9.6E-05 20.4 2.8 43 9-54 23-65 (215)
124 2h88_A Succinate dehydrogenase 71.1 2.4 1E-04 20.3 2.8 118 7-131 11-172 (621)
125 2nx2_A Hypothetical protein YP 70.9 3 0.00012 19.6 3.2 108 76-195 21-129 (181)
126 3g0o_A 3-hydroxyisobutyrate de 70.6 4.4 0.00018 18.3 4.0 184 15-225 8-218 (303)
127 1nri_A Hypothetical protein HI 70.4 4.6 0.00019 18.2 7.4 114 14-170 71-194 (306)
128 1wde_A Probable diphthine synt 70.1 4.6 0.0002 18.2 6.0 82 82-165 67-171 (294)
129 1bg6_A N-(1-D-carboxylethyl)-L 70.0 4.7 0.0002 18.1 6.2 39 14-55 4-42 (359)
130 3d1l_A Putative NADP oxidoredu 70.0 2.2 9.4E-05 20.5 2.4 77 15-107 11-103 (266)
131 3kbq_A Protein TA0487; structu 69.4 4.8 0.0002 18.0 4.5 37 89-125 53-89 (172)
132 3e82_A Putative oxidoreductase 68.9 4.9 0.00021 18.0 9.2 94 14-142 7-103 (364)
133 1txg_A Glycerol-3-phosphate de 68.9 4.3 0.00018 18.4 3.7 39 16-55 2-40 (335)
134 1lss_A TRK system potassium up 68.2 5.1 0.00021 17.9 8.2 97 16-138 6-105 (140)
135 3l9w_A Glutathione-regulated p 67.7 5.2 0.00022 17.8 8.3 95 15-135 5-102 (413)
136 3c1a_A Putative oxidoreductase 67.4 5.2 0.00022 17.8 10.8 92 13-140 9-103 (315)
137 1qyc_A Phenylcoumaran benzylic 67.1 5.3 0.00022 17.7 7.9 101 13-136 3-112 (308)
138 3b9q_A Chloroplast SRP recepto 67.1 5.3 0.00022 17.7 4.6 46 109-164 106-154 (302)
139 3llv_A Exopolyphosphatase-rela 66.5 5.5 0.00023 17.6 11.6 100 12-138 4-106 (141)
140 1mv8_A GMD, GDP-mannose 6-dehy 66.3 5.5 0.00023 17.6 5.8 108 16-139 2-127 (436)
141 1z7e_A Protein aRNA; rossmann 66.3 5.5 0.00023 17.6 10.6 161 16-202 2-226 (660)
142 3ec7_A Putative dehydrogenase; 66.0 5.6 0.00023 17.6 9.9 103 5-142 14-123 (357)
143 3ghy_A Ketopantoate reductase 65.6 2.9 0.00012 19.7 2.3 41 14-55 3-43 (335)
144 1ydw_A AX110P-like protein; st 64.9 5.8 0.00024 17.4 9.9 92 13-142 5-107 (362)
145 1wek_A Hypothetical protein TT 64.7 5.9 0.00025 17.4 6.6 104 51-169 30-140 (217)
146 1yj8_A Glycerol-3-phosphate de 64.0 3.9 0.00016 18.7 2.7 39 11-49 18-62 (375)
147 1rcu_A Conserved hypothetical 63.9 6.1 0.00025 17.3 5.8 59 71-140 31-91 (195)
148 2ahr_A Putative pyrroline carb 62.5 4.3 0.00018 18.4 2.7 35 16-53 5-39 (259)
149 1xea_A Oxidoreductase, GFO/IDH 62.5 6 0.00025 17.3 3.4 96 15-142 3-99 (323)
150 1a9x_A Carbamoyl phosphate syn 61.9 3.5 0.00015 19.1 2.1 195 15-269 8-221 (1073)
151 3gg2_A Sugar dehydrogenase, UD 61.5 6.7 0.00028 17.0 5.1 108 16-138 4-125 (450)
152 2abw_A PDX2 protein, glutamina 61.1 6.8 0.00028 17.0 5.4 49 14-65 3-51 (227)
153 3cea_A MYO-inositol 2-dehydrog 60.9 6.8 0.00029 16.9 7.7 99 12-142 5-107 (346)
154 3moi_A Probable dehydrogenase; 60.7 6.9 0.00029 16.9 6.5 133 14-197 2-141 (387)
155 1f06_A MESO-diaminopimelate D- 59.9 7.1 0.0003 16.8 6.7 89 14-139 3-91 (320)
156 3l4b_C TRKA K+ channel protien 59.6 7.1 0.0003 16.8 5.6 97 16-139 2-103 (218)
157 1mqs_A SLY1 protein, SLY1P; SM 59.4 7.2 0.0003 16.8 4.9 23 188-210 196-218 (671)
158 2r7k_A 5-formaminoimidazole-4- 59.0 7.3 0.00031 16.7 5.6 43 88-136 3-48 (361)
159 1vhv_A Diphthine synthase; str 58.9 7.3 0.00031 16.7 5.9 99 14-130 12-117 (268)
160 3fdi_A Uncharacterized protein 58.3 5.9 0.00025 17.4 2.8 26 22-50 14-39 (201)
161 2ew2_A 2-dehydropantoate 2-red 57.1 4.4 0.00019 18.3 2.0 40 15-55 4-44 (316)
162 2pgd_A 6-phosphogluconate dehy 56.7 7.9 0.00033 16.4 7.4 98 14-132 2-123 (482)
163 2f02_A Tagatose-6-phosphate ki 56.2 8.1 0.00034 16.4 9.4 114 19-135 34-166 (323)
164 1z82_A Glycerol-3-phosphate de 55.9 4.2 0.00018 18.5 1.7 38 11-49 11-48 (335)
165 2i5b_A Phosphomethylpyrimidine 55.8 7 0.00029 16.8 2.8 136 15-174 4-146 (271)
166 1f0y_A HCDH, L-3-hydroxyacyl-C 55.3 3.2 0.00013 19.4 1.0 85 16-105 17-107 (302)
167 2og2_A Putative signal recogni 55.2 8.3 0.00035 16.3 4.9 16 110-125 164-179 (359)
168 3m2t_A Probable dehydrogenase; 54.8 8.5 0.00036 16.2 7.9 98 14-142 5-104 (359)
169 3i6i_A Putative leucoanthocyan 54.8 8.5 0.00036 16.2 7.9 96 13-131 9-113 (346)
170 2dpo_A L-gulonate 3-dehydrogen 54.5 1.2 5E-05 22.6 -1.3 38 15-55 7-44 (319)
171 3cmm_A Ubiquitin-activating en 54.4 6.6 0.00028 17.0 2.5 32 13-44 26-57 (1015)
172 3e9m_A Oxidoreductase, GFO/IDH 54.4 8.6 0.00036 16.2 5.9 98 14-142 5-103 (330)
173 1evy_A Glycerol-3-phosphate de 53.9 2.4 9.9E-05 20.3 0.2 32 16-48 17-48 (366)
174 2jg1_A Tagatose-6-phosphate ki 53.2 9 0.00038 16.0 8.9 113 19-134 52-183 (330)
175 1f20_A Nitric-oxide synthase; 53.0 7.5 0.00032 16.6 2.6 29 195-223 179-207 (435)
176 2v4u_A CTP synthase 2; pyrimid 52.7 9.1 0.00038 16.0 4.5 45 90-135 82-126 (289)
177 3fpc_A NADP-dependent alcohol 52.7 8.9 0.00037 16.1 2.9 19 119-137 181-199 (352)
178 3dfz_A SIRC, precorrin-2 dehyd 52.5 9.2 0.00039 16.0 3.8 71 15-88 32-112 (223)
179 1tlt_A Putative oxidoreductase 52.4 9.2 0.00039 16.0 9.5 95 14-142 5-101 (319)
180 2dc1_A L-aspartate dehydrogena 52.3 9.2 0.00039 16.0 7.6 107 16-169 2-109 (236)
181 3oj0_A Glutr, glutamyl-tRNA re 52.3 5.2 0.00022 17.8 1.7 97 14-143 21-117 (144)
182 3ces_A MNMG, tRNA uridine 5-ca 51.7 8.9 0.00037 16.1 2.8 44 15-61 29-72 (651)
183 3cp8_A TRNA uridine 5-carboxym 51.4 9.1 0.00038 16.0 2.8 35 16-51 23-57 (641)
184 2ep5_A 350AA long hypothetical 50.9 9.7 0.00041 15.8 3.0 111 14-142 4-114 (350)
185 1ks9_A KPA reductase;, 2-dehyd 50.5 6.8 0.00028 16.9 2.1 30 16-46 2-31 (291)
186 3c1o_A Eugenol synthase; pheny 50.5 9.8 0.00041 15.7 6.8 95 14-131 4-107 (321)
187 1m3s_A Hypothetical protein YC 50.3 9.9 0.00042 15.7 5.2 56 96-169 77-132 (186)
188 1ys4_A Aspartate-semialdehyde 49.8 3.2 0.00013 19.3 0.3 106 14-141 8-119 (354)
189 3c85_A Putative glutathione-re 49.7 10 0.00042 15.7 7.5 101 12-138 37-142 (183)
190 3g17_A Similar to 2-dehydropan 49.2 10 0.00042 15.7 2.8 32 14-46 2-33 (294)
191 1y81_A Conserved hypothetical 49.1 10 0.00043 15.6 6.1 38 9-50 10-51 (138)
192 3bio_A Oxidoreductase, GFO/IDH 49.1 10 0.00043 15.6 9.5 89 12-135 7-96 (304)
193 3p2y_A Alanine dehydrogenase/p 48.9 10 0.00044 15.6 5.5 15 288-302 260-274 (381)
194 3l6b_A Serine racemase; pyrido 48.2 5 0.00021 17.9 1.1 71 60-139 40-110 (346)
195 1t35_A Hypothetical protein YV 48.1 11 0.00045 15.5 7.6 87 74-169 12-106 (191)
196 3go6_A Ribokinase RBSK; phosph 48.1 8.2 0.00035 16.3 2.2 133 19-176 52-206 (310)
197 2iyv_A Shikimate kinase, SK; t 47.9 5.5 0.00023 17.6 1.3 34 14-50 2-35 (184)
198 1y0p_A Fumarate reductase flav 46.9 11 0.00047 15.4 4.1 36 97-139 125-160 (571)
199 1orr_A CDP-tyvelose-2-epimeras 46.1 6.7 0.00028 17.0 1.5 101 15-137 2-124 (347)
200 3fwz_A Inner membrane protein 46.1 11 0.00048 15.3 8.9 100 12-138 5-108 (140)
201 3i83_A 2-dehydropantoate 2-red 46.0 7.9 0.00033 16.5 1.8 36 16-53 4-39 (320)
202 2r85_A PURP protein PF1517; AT 45.8 11 0.00048 15.3 2.6 26 111-136 7-32 (334)
203 3ff4_A Uncharacterized protein 45.5 12 0.00049 15.2 4.1 96 15-132 5-109 (122)
204 3n0x_A Possible substrate bind 45.0 12 0.0005 15.2 6.0 53 74-137 54-106 (374)
205 2iwb_A Methicillin resistance 44.8 12 0.0005 15.1 3.4 74 112-223 50-123 (246)
206 2v78_A Fructokinase; transfera 44.7 12 0.0005 15.1 4.0 40 19-59 29-75 (313)
207 2q3e_A UDP-glucose 6-dehydroge 44.4 12 0.00051 15.1 12.0 43 14-57 5-47 (467)
208 3doj_A AT3G25530, dehydrogenas 43.8 9.5 0.0004 15.9 1.9 48 176-224 181-229 (310)
209 3abq_B Ethanolamine ammonia-ly 43.8 9.2 0.00039 15.9 1.9 16 151-166 75-90 (306)
210 1jjv_A Dephospho-COA kinase; P 43.7 12 0.00052 15.0 2.6 17 19-35 7-23 (206)
211 2wdq_A Succinate dehydrogenase 43.6 12 0.00052 15.0 3.2 117 7-131 2-160 (588)
212 1x0v_A GPD-C, GPDH-C, glycerol 43.6 2.7 0.00011 19.9 -0.9 120 15-138 9-155 (354)
213 3hwr_A 2-dehydropantoate 2-red 42.9 9.4 0.0004 15.9 1.8 31 15-46 20-50 (318)
214 1ydh_A AT5G11950; structural g 42.7 13 0.00054 14.9 6.7 87 74-169 20-114 (216)
215 1o97_D Electron transferring f 42.7 13 0.00054 14.9 3.9 26 102-127 3-28 (320)
216 1s4d_A Uroporphyrin-III C-meth 42.4 6.4 0.00027 17.1 0.9 100 14-129 14-121 (280)
217 2ixa_A Alpha-N-acetylgalactosa 42.0 13 0.00055 14.9 11.3 144 8-197 11-168 (444)
218 1g8l_A Molybdopterin biosynthe 41.8 13 0.00055 14.8 3.0 19 217-235 209-227 (411)
219 2qtl_A MSR;, methionine syntha 41.7 13 0.00055 14.8 2.6 27 197-223 262-288 (539)
220 3ezy_A Dehydrogenase; structur 41.6 13 0.00055 14.8 5.1 94 15-141 3-99 (344)
221 1vma_A Cell division protein F 41.3 13 0.00056 14.8 4.3 46 108-163 109-157 (306)
222 3jqq_A Ferredoxin NADP reducta 41.1 13 0.00053 15.0 2.2 21 98-124 170-190 (316)
223 2d59_A Hypothetical protein PH 41.1 13 0.00056 14.7 6.9 41 6-49 11-58 (144)
224 2xed_A Putative maleate isomer 40.7 14 0.00057 14.7 4.1 21 119-140 136-156 (273)
225 2c5a_A GDP-mannose-3', 5'-epim 40.6 14 0.00057 14.7 9.0 105 16-142 31-150 (379)
226 2rc5_A Ferredoxin-NADP reducta 40.6 13 0.00056 14.8 2.3 19 99-123 166-184 (314)
227 2czc_A Glyceraldehyde-3-phosph 40.1 14 0.00058 14.6 5.8 107 14-140 2-114 (334)
228 1uwk_A Urocanate hydratase; hy 39.9 14 0.00059 14.6 4.7 153 65-225 125-335 (557)
229 1jbq_A Cystathionine beta-synt 39.5 14 0.00059 14.6 2.3 53 103-170 164-216 (435)
230 1h6d_A Precursor form of gluco 39.3 14 0.0006 14.6 8.1 95 14-142 83-186 (433)
231 3hh1_A Tetrapyrrole methylase 39.2 14 0.0006 14.5 7.6 105 14-135 5-115 (117)
232 2a6a_A Hypothetical protein TM 39.1 14 0.0006 14.5 2.9 97 26-138 2-107 (218)
233 2bwj_A Adenylate kinase 5; pho 38.7 15 0.00061 14.5 3.6 35 95-133 8-42 (199)
234 3dtt_A NADP oxidoreductase; YP 38.4 13 0.00056 14.8 2.0 39 14-55 19-57 (245)
235 2zyd_A 6-phosphogluconate dehy 38.3 15 0.00062 14.5 10.6 181 13-221 14-234 (480)
236 2jg5_A Fructose 1-phosphate ki 38.2 15 0.00062 14.4 12.9 163 17-197 30-211 (306)
237 1tzy_D Histone H4-VI; histone- 38.0 15 0.00062 14.4 4.2 44 189-232 59-102 (103)
238 2b5o_A FNR, ferredoxin--NADP r 37.9 13 0.00056 14.8 1.9 41 280-320 217-261 (402)
239 2hig_A 6-phospho-1-fructokinas 37.9 9 0.00038 16.0 1.1 133 87-237 176-329 (487)
240 1l7d_A Nicotinamide nucleotide 37.9 15 0.00063 14.4 3.7 12 93-104 62-73 (384)
241 1x87_A Urocanase protein; stru 37.8 15 0.00063 14.4 4.1 71 67-142 122-199 (551)
242 2om2_B Regulator of G-protein 37.7 8 0.00034 16.4 0.8 13 486-498 24-36 (36)
243 1cp2_A CP2, nitrogenase iron p 36.9 15 0.00065 14.3 5.8 37 16-52 3-41 (269)
244 2fkn_A Urocanate hydratase; ro 36.9 15 0.00065 14.3 4.7 73 65-142 121-200 (552)
245 3kux_A Putative oxidoreductase 36.9 15 0.00065 14.3 9.7 133 14-196 7-143 (352)
246 3hj6_A Fructokinase, FRK; fruc 36.8 16 0.00065 14.3 3.2 135 21-164 52-209 (327)
247 2dgd_A 223AA long hypothetical 36.5 16 0.00066 14.3 3.1 29 226-254 173-201 (223)
248 1iuk_A Hypothetical protein TT 36.1 16 0.00067 14.2 4.7 104 9-133 5-122 (140)
249 2qyt_A 2-dehydropantoate 2-red 36.1 10 0.00042 15.7 1.1 34 12-45 5-44 (317)
250 1qo8_A Flavocytochrome C3 fuma 36.0 16 0.00067 14.2 4.2 34 97-138 120-154 (566)
251 1fnb_A Ferredoxin-NADP+ reduct 35.5 15 0.00064 14.3 1.9 21 98-124 162-182 (314)
252 3n0w_A ABC branched chain amin 35.3 16 0.00069 14.1 6.4 52 74-136 54-105 (379)
253 3i09_A Periplasmic branched-ch 35.0 16 0.00069 14.1 5.7 52 74-136 52-103 (375)
254 2d8a_A PH0655, probable L-thre 34.9 17 0.00069 14.1 3.1 34 99-138 168-202 (348)
255 1efp_A ETF, protein (electron 34.9 17 0.0007 14.1 2.6 62 102-174 2-66 (307)
256 2r6j_A Eugenol synthase 1; phe 34.5 17 0.00071 14.0 7.4 108 7-136 4-115 (318)
257 3g5s_A Methylenetetrahydrofola 34.4 17 0.00071 14.0 2.5 33 16-49 3-35 (443)
258 1rsg_A FMS1 protein; FAD bindi 34.1 17 0.00071 14.0 2.6 32 13-44 7-38 (516)
259 1fs5_A Glucosamine-6-phosphate 34.0 17 0.00072 14.0 5.3 52 78-129 10-61 (266)
260 2o2z_A Hypothetical protein; N 34.0 17 0.00072 14.0 3.4 32 108-143 10-41 (323)
261 1wl4_A Acetyl-coenzyme A acety 33.9 17 0.00072 14.0 5.5 10 130-139 9-18 (397)
262 2rfg_A Dihydrodipicolinate syn 33.6 17 0.00073 13.9 3.3 62 104-169 72-133 (297)
263 3lo8_A Ferredoxin--NADP reduct 33.6 17 0.00072 14.0 1.9 15 111-125 167-181 (311)
264 3ip3_A Oxidoreductase, putativ 33.2 18 0.00074 13.9 7.6 139 14-197 2-146 (337)
265 1hv8_A Putative ATP-dependent 33.2 18 0.00074 13.9 3.0 48 90-137 35-83 (367)
266 2yy7_A L-threonine dehydrogena 32.8 18 0.00075 13.8 2.2 107 14-139 2-120 (312)
267 2x4g_A Nucleoside-diphosphate- 32.6 18 0.00075 13.8 8.1 98 16-137 15-126 (342)
268 1pjq_A CYSG, siroheme synthase 32.5 18 0.00076 13.8 7.6 87 14-132 12-101 (457)
269 3kjh_A CO dehydrogenase/acetyl 32.3 18 0.00076 13.8 3.0 37 16-52 2-40 (254)
270 2bmw_A Ferredoxin--NADP reduct 32.1 18 0.00077 13.8 1.9 20 99-124 149-168 (304)
271 3lk7_A UDP-N-acetylmuramoylala 32.0 18 0.00077 13.8 10.2 119 10-136 4-146 (451)
272 2grj_A Dephospho-COA kinase; T 32.0 18 0.00077 13.7 3.3 28 106-133 15-42 (192)
273 1ddg_A Sulfite reductase (NADP 31.9 14 0.0006 14.5 1.3 20 206-225 140-159 (374)
274 2raf_A Putative dinucleotide-b 31.9 16 0.00069 14.1 1.6 39 6-49 13-51 (209)
275 1ja1_A NADPH-cytochrome P450 r 31.9 14 0.0006 14.5 1.3 14 190-203 161-174 (622)
276 3ip1_A Alcohol dehydrogenase, 31.7 19 0.00078 13.7 4.6 158 97-288 212-385 (404)
277 3lyu_A Putative hydrogenase; t 31.7 19 0.00078 13.7 2.3 27 99-131 19-47 (142)
278 3mz0_A Inositol 2-dehydrogenas 31.4 19 0.00079 13.7 9.8 96 15-141 3-101 (344)
279 2duw_A Putative COA-binding pr 31.3 19 0.00079 13.7 4.0 40 8-48 4-50 (145)
280 1epu_A S-SEC1; parallel beta-s 31.2 19 0.00079 13.7 5.5 12 86-97 78-89 (591)
281 1r6d_A TDP-glucose-4,6-dehydra 31.1 19 0.0008 13.6 5.2 104 16-137 2-127 (337)
282 3ie7_A LIN2199 protein; phosph 30.9 19 0.0008 13.6 11.0 115 16-133 32-168 (320)
283 1dxe_A 2-dehydro-3-deoxy-galac 30.7 19 0.00081 13.6 3.8 66 160-233 169-238 (256)
284 2qgz_A Helicase loader, putati 30.5 19 0.00081 13.6 2.6 58 81-142 132-194 (308)
285 2pan_A Glyoxylate carboligase; 30.5 6.6 0.00028 17.0 -0.6 27 18-46 44-71 (616)
286 2ozp_A N-acetyl-gamma-glutamyl 30.5 19 0.00081 13.6 3.7 102 14-142 4-105 (345)
287 3evn_A Oxidoreductase, GFO/IDH 30.2 20 0.00082 13.5 9.1 95 14-141 5-102 (329)
288 1yb4_A Tartronic semialdehyde 30.0 20 0.00083 13.5 12.8 48 177-225 163-211 (295)
289 1t3l_A Dihydropyridine-sensiti 29.9 20 0.00083 13.5 2.4 17 88-104 218-234 (337)
290 3hdt_A Putative kinase; struct 29.9 20 0.00083 13.5 3.0 23 107-129 18-40 (223)
291 1s1m_A CTP synthase; CTP synth 29.4 20 0.00084 13.5 4.1 87 71-159 106-200 (545)
292 1zzg_A Glucose-6-phosphate iso 29.3 20 0.00085 13.4 5.7 38 16-54 68-107 (415)
293 2g4r_A MOGA, molybdopterin bio 28.8 21 0.00086 13.4 5.1 32 92-123 56-87 (160)
294 1i36_A Conserved hypothetical 28.8 21 0.00087 13.4 1.9 24 16-39 2-25 (264)
295 3hjh_A Transcription-repair-co 28.6 21 0.00087 13.4 4.4 162 108-319 19-189 (483)
296 2vc6_A MOSA, dihydrodipicolina 28.4 21 0.00088 13.3 2.7 62 102-167 70-131 (292)
297 3fkr_A L-2-keto-3-deoxyarabona 28.3 21 0.00088 13.3 4.0 66 102-169 78-144 (309)
298 1pea_A Amidase operon; gene re 28.1 21 0.00089 13.3 6.3 49 75-134 57-105 (385)
299 3mog_A Probable 3-hydroxybutyr 27.9 21 0.00089 13.3 3.6 44 6-56 1-44 (483)
300 2nx9_A Oxaloacetate decarboxyl 27.6 19 0.00082 13.6 1.4 24 117-140 129-152 (464)
301 2bs2_A Quinol-fumarate reducta 27.4 22 0.00091 13.2 3.1 75 17-96 8-101 (660)
302 3gdw_A Sigma-54 interaction do 27.4 22 0.00091 13.2 2.6 45 97-144 61-105 (139)
303 1cfz_A Hydrogenase 2 maturatio 27.0 22 0.00093 13.2 5.7 61 16-77 2-73 (162)
304 3bpd_A Uncharacterized protein 26.9 22 0.00093 13.1 2.5 24 211-234 59-82 (100)
305 3db2_A Putative NADPH-dependen 26.9 22 0.00093 13.1 5.8 113 14-165 5-120 (354)
306 3cwc_A Putative glycerate kina 26.9 22 0.00093 13.1 4.5 25 180-204 352-376 (383)
307 2gn0_A Threonine dehydratase c 26.3 23 0.00095 13.1 5.2 18 90-107 180-197 (342)
308 2o3i_A Hypothetical protein; N 26.2 11 0.00046 15.4 -0.1 38 71-109 21-69 (405)
309 3k40_A Aromatic-L-amino-acid d 26.2 23 0.00096 13.1 4.7 20 110-129 243-265 (475)
310 3llm_A ATP-dependent RNA helic 26.0 23 0.00096 13.0 3.4 54 85-138 62-117 (235)
311 2gn4_A FLAA1 protein, UDP-GLCN 26.0 23 0.00096 13.0 8.1 103 15-137 22-142 (344)
312 2px0_A Flagellar biosynthesis 25.9 23 0.00097 13.0 4.7 52 100-164 106-160 (296)
313 3ixl_A Amdase, arylmalonate de 25.8 23 0.00097 13.0 3.5 29 226-254 182-210 (240)
314 2jgq_A Triosephosphate isomera 25.8 23 0.00097 13.0 6.1 86 219-306 109-201 (233)
315 1b37_A Protein (polyamine oxid 25.7 23 0.00098 13.0 3.0 32 13-44 3-34 (472)
316 2raq_A Conserved protein MTH88 25.4 23 0.00099 13.0 2.8 23 211-233 59-81 (97)
317 2b9w_A Putative aminooxidase; 25.4 23 0.00099 13.0 3.1 30 14-43 6-35 (424)
318 2bpo_A CPR, P450R, NADPH-cytoc 25.3 18 0.00075 13.8 0.9 17 221-237 133-149 (682)
319 1e3i_A Alcohol dehydrogenase, 25.2 24 0.00099 12.9 4.2 35 97-137 194-228 (376)
320 3nl6_A Thiamine biosynthetic b 25.1 24 0.001 12.9 3.2 43 183-226 209-262 (540)
321 2e67_A Hypothetical protein TT 25.1 24 0.001 12.9 2.2 200 27-259 25-249 (264)
322 3cpr_A Dihydrodipicolinate syn 25.0 24 0.001 12.9 4.6 37 104-142 88-124 (304)
323 2iht_A Carboxyethylarginine sy 24.8 24 0.001 12.9 2.3 53 82-138 57-109 (573)
324 2ehh_A DHDPS, dihydrodipicolin 24.6 24 0.001 12.9 4.4 64 102-169 70-133 (294)
325 3kd6_A Carbohydrate kinase, PF 24.4 24 0.001 12.8 2.8 28 22-49 27-55 (313)
326 2iz1_A 6-phosphogluconate dehy 24.3 25 0.001 12.8 8.9 182 14-223 5-227 (474)
327 2if2_A Dephospho-COA kinase; a 24.2 25 0.001 12.8 2.5 20 16-35 3-22 (204)
328 2r8w_A AGR_C_1641P; APC7498, d 23.9 25 0.001 12.8 4.6 64 102-169 104-167 (332)
329 2x3d_A SSO6206; unknown functi 23.9 25 0.001 12.8 2.8 25 211-235 58-82 (96)
330 2z04_A Phosphoribosylaminoimid 23.9 25 0.001 12.8 6.2 33 20-52 4-36 (365)
331 1vco_A CTP synthetase; tetrame 23.9 25 0.001 12.8 4.5 88 71-160 115-212 (550)
332 2yxe_A Protein-L-isoaspartate 23.7 25 0.0011 12.7 1.8 82 49-157 41-125 (215)
333 3oqb_A Oxidoreductase; structu 23.7 25 0.0011 12.7 4.1 100 75-196 53-159 (383)
334 3e18_A Oxidoreductase; dehydro 23.6 25 0.0011 12.7 8.2 134 14-196 5-141 (359)
335 2v8p_A 4-diphosphocytidyl-2-C- 23.6 22 0.00092 13.2 1.0 26 218-245 235-260 (271)
336 3i45_A Twin-arginine transloca 23.5 25 0.0011 12.7 6.0 51 75-136 55-105 (387)
337 2ho3_A Oxidoreductase, GFO/IDH 23.4 25 0.0011 12.7 6.9 95 15-141 2-97 (325)
338 1cs1_A CGS, protein (cystathio 23.2 26 0.0011 12.7 6.6 27 201-227 143-169 (386)
339 3iup_A Putative NADPH:quinone 23.2 26 0.0011 12.7 2.2 38 96-138 169-206 (379)
340 1js3_A DDC;, DOPA decarboxylas 22.7 26 0.0011 12.6 4.7 43 89-131 223-268 (486)
341 1v71_A Serine racemase, hypoth 22.7 26 0.0011 12.6 2.9 41 89-134 165-207 (323)
342 3iij_A Coilin-interacting nucl 22.7 26 0.0011 12.6 1.5 33 13-46 10-42 (180)
343 1xky_A Dihydrodipicolinate syn 22.4 27 0.0011 12.6 4.5 58 106-167 86-143 (301)
344 2h00_A Methyltransferase 10 do 22.3 21 0.0009 13.3 0.8 34 107-142 69-103 (254)
345 2cvz_A Dehydrogenase, 3-hydrox 22.3 27 0.0011 12.5 2.3 173 15-224 2-203 (289)
346 2vpq_A Acetyl-COA carboxylase; 22.3 27 0.0011 12.5 2.4 200 16-270 3-214 (451)
347 2eyq_A TRCF, transcription-rep 22.1 27 0.0011 12.5 5.0 28 108-135 22-49 (1151)
348 1cdo_A Alcohol dehydrogenase; 22.1 24 0.00099 12.9 1.0 32 98-135 192-223 (374)
349 2bc0_A NADH oxidase; flavoprot 22.0 27 0.0011 12.5 2.8 36 13-48 34-69 (490)
350 1nvm_A HOA, 4-hydroxy-2-oxoval 22.0 27 0.0011 12.5 1.6 75 223-309 131-208 (345)
351 1vj0_A Alcohol dehydrogenase, 22.0 27 0.0011 12.5 5.2 33 99-137 196-228 (380)
352 1vht_A Dephospho-COA kinase; s 22.0 27 0.0011 12.5 3.0 26 107-133 8-33 (218)
353 1jg1_A PIMT;, protein-L-isoasp 22.0 27 0.0011 12.5 3.3 33 204-236 162-194 (235)
354 1c0p_A D-amino acid oxidase; a 21.9 27 0.0011 12.5 2.6 31 13-44 5-35 (363)
355 2pbf_A Protein-L-isoaspartate 21.9 27 0.0011 12.5 4.1 116 95-234 77-196 (227)
356 2zxi_A TRNA uridine 5-carboxym 21.8 27 0.0011 12.5 2.8 35 15-50 28-62 (637)
357 3dfu_A Uncharacterized protein 21.7 27 0.0011 12.5 1.7 120 14-163 6-126 (232)
358 2c31_A Oxalyl-COA decarboxylas 21.7 27 0.0011 12.5 2.7 14 18-31 27-40 (568)
359 1tll_A Nitric-oxide synthase, 21.6 16 0.00067 14.2 0.0 30 180-212 180-209 (688)
360 1xxx_A DHDPS, dihydrodipicolin 21.6 28 0.0012 12.4 4.6 68 95-168 79-146 (303)
361 2f6r_A COA synthase, bifunctio 21.6 28 0.0012 12.4 2.9 31 99-132 73-103 (281)
362 2z1m_A GDP-D-mannose dehydrata 21.5 28 0.0012 12.4 4.5 94 16-130 5-119 (345)
363 3dme_A Conserved exported prot 21.5 28 0.0012 12.4 2.6 28 16-44 6-33 (369)
364 3cfy_A Putative LUXO repressor 21.4 28 0.0012 12.4 11.6 108 13-144 3-112 (137)
365 3a5f_A Dihydrodipicolinate syn 21.3 28 0.0012 12.4 4.3 41 102-144 71-111 (291)
366 2o4u_X Dimeric dihydrodiol deh 21.2 28 0.0012 12.4 8.8 115 15-165 3-120 (334)
367 3en0_A Cyanophycinase; serine 21.1 28 0.0012 12.4 2.9 69 91-167 47-117 (291)
368 3c3d_A 2-phospho-L-lactate tra 21.1 28 0.0012 12.4 1.2 17 108-127 4-20 (311)
369 3m2p_A UDP-N-acetylglucosamine 21.1 28 0.0012 12.4 13.7 103 16-143 4-115 (311)
370 2hue_C Histone H4; mini beta s 21.1 28 0.0012 12.4 4.5 41 192-232 43-83 (84)
371 3kp1_E D-ornithine aminomutase 20.9 28 0.0012 12.4 2.2 12 116-127 81-92 (121)
372 1j5p_A Aspartate dehydrogenase 20.9 28 0.0012 12.3 5.7 111 11-169 9-119 (253)
373 3etn_A Putative phosphosugar i 20.7 29 0.0012 12.3 7.5 96 14-171 59-163 (220)
374 3dma_A Exopolyphosphatase-rela 20.6 29 0.0012 12.3 3.0 55 85-139 7-62 (343)
375 3flu_A DHDPS, dihydrodipicolin 20.6 29 0.0012 12.3 4.5 111 102-230 77-191 (297)
376 3nva_A CTP synthase; rossman f 20.5 29 0.0012 12.3 3.7 87 70-159 105-202 (535)
377 1dn1_A NSEC1, syntaxin binding 20.5 29 0.0012 12.3 4.4 23 189-211 165-187 (594)
378 2wam_A RV2714, conserved hypot 20.5 29 0.0012 12.3 6.7 101 75-178 149-280 (351)
379 3lx3_A 6-pyruvoyl tetrahydrobi 20.3 29 0.0012 12.3 1.6 15 207-222 65-79 (180)
380 3lkb_A Probable branched-chain 20.3 29 0.0012 12.3 3.0 52 75-138 57-108 (392)
381 2wmy_A WZB, putative acid phos 20.3 29 0.0012 12.3 2.5 96 93-204 30-148 (150)
382 2a3n_A Putative glucosamine-fr 20.2 29 0.0012 12.2 9.4 41 96-139 100-140 (355)
383 2g64_A Putative 6-pyruvoyl tet 20.1 29 0.0012 12.3 1.1 18 204-222 59-76 (140)
No 1
>2vaw_A FTSZ, cell division protein FTSZ; bacterial cell division protein, tubulin homolog, nucleotide-binding, GTPase, septation, cytoplasm; HET: GDP; 2.90A {Pseudomonas aeruginosa} SCOP: c.32.1.1 d.79.2.1
Probab=100.00 E-value=0 Score=876.27 Aligned_cols=310 Identities=50% Similarity=0.831 Sum_probs=306.0
Q ss_pred CCCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 38617999966814799999998589984499982557885518997048515542556788888389999999729999
Q gi|254781176|r 13 LKPRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDAQALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAEECIDEI 92 (502)
Q Consensus 13 ~~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~~~~i 92 (502)
-+.+||||||||||||+||||++.++.+|+|||+|||+|||.+|++++|||||.++||||||||||++||+||+|+.++|
T Consensus 10 ~~~~ikviGvGG~G~N~v~~m~~~~~~~v~~ia~NTD~q~L~~~~~~~ki~iG~~~t~G~GaG~~p~~g~~aa~~~~~~i 89 (394)
T 2vaw_A 10 QTAVIKVIGVGGGGGNAVNHMAKNNVEGVEFICANTDAQALKNIAARTVLQLGPGVTKGLGAGANPEVGRQAALEDRERI 89 (394)
T ss_dssp TTCCEEEEEEHHHHHHHHHHHHTTTCCSEEEEEEESCTTTTSSCSSSCEEECCHHHHSSSCCCSCHHHHHHHHHHTHHHH
T ss_pred CCCEEEEEEECCCCHHHHHHHHHCCCCCCEEEEEECCHHHHHCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 88648999847773789999997499983699993739988359998179607876678899888689999999709999
Q ss_pred HHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99726998999980367666740789999999864984999950430004067888899999999986333545027888
Q gi|254781176|r 93 TEMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPFHFEGSRRMRVAESGIEALQETVDTLIVIPNQNL 172 (502)
Q Consensus 93 ~~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf~~eg~~r~~~a~~~~~~l~~~~d~~i~i~n~~l 172 (502)
+++|+++||||||||||||||||||||||++||++|+|||+|||+||.|||++|+++|++||++|+++||++||||||||
T Consensus 90 ~~~l~~~d~vfi~aGmGGGTGtGaapviA~~Ake~g~ltv~ivt~PF~~Eg~~r~~~A~~gi~~L~~~~D~~Ivi~Nd~L 169 (394)
T 2vaw_A 90 SEVLEGADMVFITTGMGGGTGTGAAPIIAEVAKEMGILTVAVVTRPFPFEGRKRMQIADEGIRALAESVDSLITIPNEKL 169 (394)
T ss_dssp HHHHTTCSEEEEEEETTSSHHHHHHHHHHHHHHHHTCEEEEEEEECCGGGHHHHHHHHHHHHHHHHTTCSEEEEEEHHHH
T ss_pred HHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHH
T ss_conf 99857888899973389987554689999999981980899930886773178999999999999964481799866899
Q ss_pred HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHCCC
Q ss_conf 74136653189997446799999988888765166555589878787641586589987614862048999988752701
Q gi|254781176|r 173 FRIANDKTTFADAFSMADQVLYSGVSCITDLMIKEGLINLDFADVRSVMRNMGRAMMGTGEASGHGRGIQAAEAAVANPL 252 (502)
Q Consensus 173 ~~~~~~~~~~~~af~~~d~~l~~~v~~i~~~i~~~g~in~df~d~~~v~~~~g~a~~g~g~~~g~~r~~~a~~~a~~~pl 252 (502)
++++++++++.+||+++|++|+++|+||+++|++||+|||||+|||+||+++|.|+||+|+++|++|+.+|+++||+|||
T Consensus 170 ~~~~~~~~~~~~af~~ad~il~~~v~gI~~ii~~~g~INvDfaDvktvm~~~G~a~~G~G~a~G~~ra~~A~~~Al~spl 249 (394)
T 2vaw_A 170 LTILGKDASLLAAFAKADDVLAGAVRGISDIIKRPGMINVDFADVKTVMSEMGMAMMGTGCASGPNRAREATEAAIRNPL 249 (394)
T ss_dssp HHHHGGGCCHHHHHHHHHHHHHHHHHHHHHHHHSBCSSCCCHHHHHHHHTTTCCBEEEEEEECSTTHHHHHHHHHHTCGG
T ss_pred HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCEEEEEEEEECCCCHHHHHHHHHHHCCC
T ss_conf 87726798799999999999999988789861488733466899999970698499998886687329999999984665
Q ss_pred CCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCEEEEEEEEECCCCC
Q ss_conf 0002245553789996168888999999999999974168863999853134657547999985135532
Q gi|254781176|r 253 LDEASMKGSQGLLISITGGSDLTLFEVDEAATRIREEVDSEANIILGATFDEALEGVIRVSVVATGIENR 322 (502)
Q Consensus 253 l~~~~~~~a~~~l~~i~~~~~~~l~e~~~~~~~i~~~~~~~a~ii~G~~~d~~~~~~~~v~~iatg~d~~ 322 (502)
|++.+|+|||++||||+||++++|.|+++++++|++.++++|+||||+++|++|++++|||||||||+..
T Consensus 250 L~~~~i~~A~~vLvni~gg~d~~l~ev~~~~~~I~~~~~~~a~ii~G~~~d~~l~~~i~VtiIATG~~~~ 319 (394)
T 2vaw_A 250 LEDVNLQGARGILVNITAGPDLSLGEYSDVGNIIEQFASEHATVKVGTVIDADMRDELHVTVVATGLGAR 319 (394)
T ss_dssp GTTCCTTTCSEEEEEEEECTTCCHHHHHHHHHHHHHHSCTTSEEEEEEEECSSCCSCEEEEEEEECC---
T ss_pred CCCCCHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCEEEEEEECCCCCC
T ss_conf 5577801064337999558887799999999889874278985999877875458975999998478865
No 2
>1rq2_A Cell division protein FTSZ; cell cycle, tubulin, GTPase, signaling protein; HET: CIT; 1.86A {Mycobacterium tuberculosis} SCOP: c.32.1.1 d.79.2.1 PDB: 1rlu_A* 1rq7_A* 2q1y_A* 2q1x_A*
Probab=100.00 E-value=0 Score=828.32 Aligned_cols=311 Identities=54% Similarity=0.887 Sum_probs=305.6
Q ss_pred HHCCCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 54386179999668147999999985899844999825578855189970485155425567888883899999997299
Q gi|254781176|r 11 TELKPRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDAQALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAEECID 90 (502)
Q Consensus 11 ~~~~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~~~ 90 (502)
.+..++||||||||||||+||+|++.++.+|+|+++|||+|+|.++++++|||||.++|||+||||||++||+||+++++
T Consensus 8 ~~~~~~ikviGvGg~G~n~v~~~~~~~~~~v~~iainTD~~~L~~~~~~~ki~iG~~~t~G~Gag~~p~~g~~aa~~~~~ 87 (382)
T 1rq2_A 8 HNYLAVIKVVGIGGGGVNAVNRMIEQGLKGVEFIAINTDAQALLMSDADVKLDVGRDSTRGLGAGADPEVGRKAAEDAKD 87 (382)
T ss_dssp ----CCEEEEEEHHHHHHHHHHHHHTTCCSEEEEEEESCHHHHHHCCCSEEEECCTTTC-----CCCHHHHHHHHHHTHH
T ss_pred CCCCCEEEEEEECCHHHHHHHHHHHCCCCCEEEEEECCHHHHHHCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 67665289998686489999999984999708999815699984499882798476546788999884899999997499
Q ss_pred HHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99997269989999803676667407899999998649849999504300040678888999999999863335450278
Q gi|254781176|r 91 EITEMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPFHFEGSRRMRVAESGIEALQETVDTLIVIPNQ 170 (502)
Q Consensus 91 ~i~~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf~~eg~~r~~~a~~~~~~l~~~~d~~i~i~n~ 170 (502)
+|+++|+++|||||+|||||||||||+||||++||++|+|||+|||+||.|||++|+++|++||++|+++||++|+||||
T Consensus 88 ~i~~~l~~~d~vfi~aG~GGGTGtGaapviA~~Ake~g~l~v~ivt~PF~~Eg~~r~~~A~~gl~~L~~~~Ds~Ivi~Nd 167 (382)
T 1rq2_A 88 EIEELLRGADMVFVTAGEGGGTGTGGAPVVASIARKLGALTVGVVTRPFSFEGKRRSNQAENGIAALRESCDTLIVIPND 167 (382)
T ss_dssp HHHHHHTTCSEEEEEEETTSSHHHHHHHHHHHHHHHHTCEEEEEEEECCGGGCHHHHHHHHHHHHHHHHHCSEEEEEEHH
T ss_pred HHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHH
T ss_conf 99999768988999951589866537899999999849958999958878751789999999999999757949995266
Q ss_pred HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHC
Q ss_conf 88741366531899974467999999888887651665555898787876415865899876148620489999887527
Q gi|254781176|r 171 NLFRIANDKTTFADAFSMADQVLYSGVSCITDLMIKEGLINLDFADVRSVMRNMGRAMMGTGEASGHGRGIQAAEAAVAN 250 (502)
Q Consensus 171 ~l~~~~~~~~~~~~af~~~d~~l~~~v~~i~~~i~~~g~in~df~d~~~v~~~~g~a~~g~g~~~g~~r~~~a~~~a~~~ 250 (502)
||++++++++++.+||+++|++|.++|+||+++|++||+|||||+|||+||+++|.|+||+|+++|++|+.+|+++||+|
T Consensus 168 ~L~e~~~~~~~~~~af~~~d~~l~~~i~~I~~li~~~G~iNlDfaDvktvl~~~G~a~~G~G~a~g~~ra~~A~~~Al~~ 247 (382)
T 1rq2_A 168 RLLQMGDAAVSLMDAFRSADEVLLNGVQGITDLITTPGLINVDFADVKGIMSGAGTALMGIGSARGEGRSLKAAEIAINS 247 (382)
T ss_dssp HHTTSSCTTCCHHHHHHHHHHHHHHHHHHHHHHHHSBCSSCCCHHHHHHHHTTCEEEEEEEEEEESTTHHHHHHHHHHTC
T ss_pred HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCEEEEEEEEECCCCHHHHHHHHHHHC
T ss_conf 66431255675899999999999999999999832888424458899999864972899877754874599999999759
Q ss_pred CCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCEEEEEEEEECCCCC
Q ss_conf 010002245553789996168888999999999999974168863999853134657547999985135532
Q gi|254781176|r 251 PLLDEASMKGSQGLLISITGGSDLTLFEVDEAATRIREEVDSEANIILGATFDEALEGVIRVSVVATGIENR 322 (502)
Q Consensus 251 pll~~~~~~~a~~~l~~i~~~~~~~l~e~~~~~~~i~~~~~~~a~ii~G~~~d~~~~~~~~v~~iatg~d~~ 322 (502)
||| +.++++||++||||+||++|+|.|+++++++|++.++++|+||||+++|++|++++|||||||||+..
T Consensus 248 pLl-d~~i~~Ak~~Lv~I~g~~~~~l~ei~~~~~~i~~~~~~~a~ii~G~~~d~~l~~~i~VtiIATG~~~~ 318 (382)
T 1rq2_A 248 PLL-EASMEGAQGVLMSIAGGSDLGLFEINEAASLVQDAAHPDANIIFGTVIDDSLGDEVRVTVIAAGFDVS 318 (382)
T ss_dssp GGG-TTCGGGCSEEEEEEEECTTCCHHHHHHHHHHHHHHSCTTCEEEEEEEECGGGTTEEEEEEEEECC---
T ss_pred CCC-CCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEEEEEEEECCCCC
T ss_conf 564-68810533148999898878899999999999986289974999754667879859999999168876
No 3
>2vxy_A FTSZ, cell division protein FTSZ; GTP-binding, nucleotide-binding, septation, cytoplasm, B.subtilis, cell cycle; HET: CIT; 1.7A {Bacillus subtilis} PDB: 2vam_A* 2rhj_A* 2rhh_A* 2rhl_A* 2rho_A*
Probab=100.00 E-value=0 Score=818.76 Aligned_cols=311 Identities=52% Similarity=0.848 Sum_probs=306.0
Q ss_pred HHCCCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 54386179999668147999999985899844999825578855189970485155425567888883899999997299
Q gi|254781176|r 11 TELKPRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDAQALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAEECID 90 (502)
Q Consensus 11 ~~~~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~~~ 90 (502)
.+-+|+||||||||||||+||+|+..++++|+||++|||+|+|+++++++|||||.++|+|+||||||++||+||+|+.+
T Consensus 8 ~~~~~~i~viGvGg~G~n~v~~~~~~~~~~v~~iainTD~~~L~~~~~~~ki~ig~~~t~G~Gag~~p~~g~~aa~e~~~ 87 (382)
T 2vxy_A 8 IDGLASIKVIGVGGGGNNAVNRMIENEVQGVEYIAVNTDAQALNLSKAEVKMQIGAKLTRGLGAGANPEVGKKAAEESKE 87 (382)
T ss_dssp ---CCCEEEEEEHHHHHHHHHHHHHTTCCSCEEEEEESBHHHHHTCCCSEEEECCHHHHTTBCCTTCHHHHHHHHHHTHH
T ss_pred CCCCCEEEEEEECCCHHHHHHHHHHCCCCCEEEEEEECHHHHHHCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 56787499998786189999999982999738999927099872699980898277766788888885899999998799
Q ss_pred HHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99997269989999803676667407899999998649849999504300040678888999999999863335450278
Q gi|254781176|r 91 EITEMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPFHFEGSRRMRVAESGIEALQETVDTLIVIPNQ 170 (502)
Q Consensus 91 ~i~~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf~~eg~~r~~~a~~~~~~l~~~~d~~i~i~n~ 170 (502)
+|+++|+++|||||+|||||||||||+||||++||++|+|||+|||+||.|||++|+++|.+||++|+++||++|+||||
T Consensus 88 ~i~~~l~~~d~vfi~aGlGGGTGtgaapvia~~ake~g~l~v~ivt~PF~~Eg~~r~~~A~~gl~~L~~~~D~~Ivi~Nd 167 (382)
T 2vxy_A 88 QIEEALKGADMVFVTAGMGGGTGTGAAPVIAQIAKDLGALTVGVVTRPFTFEGRKRQLQAAGGISAMKEAVDTLIVIPND 167 (382)
T ss_dssp HHHHHHTTCSEEEEEEESSSSHHHHHHHHHHHHHHHTTCEEEEEEEECCGGGCHHHHHHHHHHHHHHHHHCSEEEEEEHH
T ss_pred HHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECH
T ss_conf 99975279887999954788877760689999999769918999956644435999999999999998609679998807
Q ss_pred HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHC
Q ss_conf 88741366531899974467999999888887651665555898787876415865899876148620489999887527
Q gi|254781176|r 171 NLFRIANDKTTFADAFSMADQVLYSGVSCITDLMIKEGLINLDFADVRSVMRNMGRAMMGTGEASGHGRGIQAAEAAVAN 250 (502)
Q Consensus 171 ~l~~~~~~~~~~~~af~~~d~~l~~~v~~i~~~i~~~g~in~df~d~~~v~~~~g~a~~g~g~~~g~~r~~~a~~~a~~~ 250 (502)
||++++++++++.+||+++|++|.++|++|+++|++||+|||||+|||+||+++|.|+||+|+++|++|+.+|+++||+|
T Consensus 168 ~l~~~~~~~~~~~~af~~ad~~l~~~i~~I~~li~~~g~iNvDfaDvktvm~~~G~a~~g~G~a~G~~r~~~A~~~Al~~ 247 (382)
T 2vxy_A 168 RILEIVDKNTPMLEAFREADNVLRQGVQGISDLIATPGLINLDFADVKTIMSNKGSALMGIGIATGENRAAEAAKKAISS 247 (382)
T ss_dssp HHHHHSCTTCCHHHHHHHHHHHHHHHHHHHHTTTSSCCTTCCCHHHHHHHTTCSSEEEEEEEEEESTTHHHHHHHHHHTC
T ss_pred HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHC
T ss_conf 98865245617999999871999999999999974778644373777888706850798730036862499999999859
Q ss_pred CCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCEEEEEEEEECCCCC
Q ss_conf 010002245553789996168888999999999999974168863999853134657547999985135532
Q gi|254781176|r 251 PLLDEASMKGSQGLLISITGGSDLTLFEVDEAATRIREEVDSEANIILGATFDEALEGVIRVSVVATGIENR 322 (502)
Q Consensus 251 pll~~~~~~~a~~~l~~i~~~~~~~l~e~~~~~~~i~~~~~~~a~ii~G~~~d~~~~~~~~v~~iatg~d~~ 322 (502)
|||+ .++++|+++||||+||++|+|.|+++++++|++.++++++||||+.+|++|++++|||||||||+..
T Consensus 248 PLl~-~~i~~A~~vLv~i~~~~d~~l~ev~~~~~~i~~~~~~~a~iI~G~~~d~~l~~~i~VtiIaTG~~~~ 318 (382)
T 2vxy_A 248 PLLE-AAIDGAQGVLMNITGGTNLSLYEVQEAADIVASASDQDVNMIFGSVINENLKDEIVVTVIATGFIEQ 318 (382)
T ss_dssp TTSC-SCGGGCSEEEEEEEECTTCCHHHHHHHHHHHHHHSCTTCEEEEEEEECTTCSSEEEEEEEEEEEC--
T ss_pred CCHH-HHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCEEEEEEECCCCCC
T ss_conf 4223-3442054799999848977889999999999986289971998445766779928999997789755
No 4
>1ofu_A FTSZ, cell division protein FTSZ; bacterial cell division inhibitor, SULA protein; HET: GDP; 2.1A {Pseudomonas aeruginosa} SCOP: c.32.1.1 d.79.2.1
Probab=100.00 E-value=0 Score=790.46 Aligned_cols=310 Identities=50% Similarity=0.831 Sum_probs=306.3
Q ss_pred CCCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 38617999966814799999998589984499982557885518997048515542556788888389999999729999
Q gi|254781176|r 13 LKPRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDAQALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAEECIDEI 92 (502)
Q Consensus 13 ~~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~~~~i 92 (502)
-.++||||||||||||+||+|++.++++|+|||+|||+|+|+++++++||+||+++||||||||||++||+||+|+.++|
T Consensus 10 ~~~~IkViGvGG~G~Navn~m~~~~~~~v~~ia~NTD~~~L~~~~a~~ki~iG~~~t~G~Gag~~p~~g~~aa~e~~~~I 89 (320)
T 1ofu_A 10 QTAVIKVIGVGGGGGNAVNHMAKNNVEGVEFICANTDAQALKNIAARTVLQLGPGVTKGLGAGANPEVGRQAALEDRERI 89 (320)
T ss_dssp -CCCEEEEEEHHHHHHHHHHHHHTTCCSEEEEEEESBTGGGSSCSCSEEEECCHHHHTTBCCCSCHHHHHHHHHHTHHHH
T ss_pred CCCEEEEEEECCCCHHHHHHHHHCCCCCCEEEEEECHHHHHHCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 88638999947771689999998099982699995739998469998089668887789889978226687799999999
Q ss_pred HHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99726998999980367666740789999999864984999950430004067888899999999986333545027888
Q gi|254781176|r 93 TEMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPFHFEGSRRMRVAESGIEALQETVDTLIVIPNQNL 172 (502)
Q Consensus 93 ~~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf~~eg~~r~~~a~~~~~~l~~~~d~~i~i~n~~l 172 (502)
+++|+++|||||+|||||||||||+||||++||++|+|||+|||+||.|||++|+++|++||++|+++||++|+||||||
T Consensus 90 ~~~l~~~dlvfi~aGmGGGTGtGaapvIA~~Ake~g~l~vaiVt~PF~~EG~~r~~~A~~gl~~L~~~~D~~Ivi~Nd~L 169 (320)
T 1ofu_A 90 SEVLEGADMVFITTGMGGGTGTGAAPIIAEVAKEMGILTVAVVTRPFPFEGRKRMQIADEGIRALAESVDSLITIPNEKL 169 (320)
T ss_dssp HHHHTTCSEEEEEEETTSSHHHHHHHHHHHHHHHTTCEEEEEEEECCGGGCHHHHHHHHHHHHHHHTTCSEEEEEEHHHH
T ss_pred HHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCHHHCCHHHHHHHHHHHHHHHHHCCCCEEECHHHH
T ss_conf 99973599899984268987554589999999985994899996783113389999999999999985874303436999
Q ss_pred HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHCCC
Q ss_conf 74136653189997446799999988888765166555589878787641586589987614862048999988752701
Q gi|254781176|r 173 FRIANDKTTFADAFSMADQVLYSGVSCITDLMIKEGLINLDFADVRSVMRNMGRAMMGTGEASGHGRGIQAAEAAVANPL 252 (502)
Q Consensus 173 ~~~~~~~~~~~~af~~~d~~l~~~v~~i~~~i~~~g~in~df~d~~~v~~~~g~a~~g~g~~~g~~r~~~a~~~a~~~pl 252 (502)
++++++++++.+||+++|++|+++|++|+++|++||+|||||+|||+||+++|.|+||+|+++|++|+.+|+++||+|||
T Consensus 170 ~~~~~~~~~~~~Af~~~d~il~~~i~~I~~ii~~~G~INvDfaDvktvl~~~G~a~iG~G~a~G~~r~~~A~~~Al~sPL 249 (320)
T 1ofu_A 170 LTILGKDASLLAAFAKADDVLAGAVRGISDIIKRPGMINVDFADVKTVMSEMGMAMMGTGCASGPNRAREATEAAIRNPL 249 (320)
T ss_dssp HHHHGGGCCHHHHHHHHHHHHHHHHHHHHHHHHSCSSSSCCHHHHHHHHTTCEEEEEEEEEEESTTHHHHHHHHHHTCGG
T ss_pred HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCEEEEEEEEECCCCCHHHHHHHHHHCCC
T ss_conf 97647687699999989999999999999985177864567899999984198289999986687548999999985937
Q ss_pred CCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCEEEEEEEEECCCCC
Q ss_conf 0002245553789996168888999999999999974168863999853134657547999985135532
Q gi|254781176|r 253 LDEASMKGSQGLLISITGGSDLTLFEVDEAATRIREEVDSEANIILGATFDEALEGVIRVSVVATGIENR 322 (502)
Q Consensus 253 l~~~~~~~a~~~l~~i~~~~~~~l~e~~~~~~~i~~~~~~~a~ii~G~~~d~~~~~~~~v~~iatg~d~~ 322 (502)
|++.++++|+++|+||+||++|+|.|+++++++|++.++++++||||+++|++|++++|||||||||+..
T Consensus 250 L~~~~i~~A~g~Lv~I~gg~d~tl~ev~ei~~~i~~~~~~~a~Ii~G~~~d~~l~d~v~VtIIaTG~~~~ 319 (320)
T 1ofu_A 250 LEDVNLQGARGILVNITAGPDLSLGEYSDVGNIIEQFASEHATVKVGTVIDADMRDELHVTVVATGLGAR 319 (320)
T ss_dssp GTTCCGGGCSEEEEEEEECTTCCHHHHHHHHHHHHHHSCTTSEEEEEEEECTTCCSEEEEEEEEESCC--
T ss_pred CCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCEEEEEEEECCCCCC
T ss_conf 5587703587799999859999899999999999997299985999768788789828999998168776
No 5
>2vap_A FTSZ, cell division protein FTSZ homolog 1; polymerization, tubulin homolog, GTPase, septation, cell cycle, GTP-binding; HET: GDP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.32.1.1 d.79.2.1 PDB: 1w59_A 1w58_1* 1w5a_A* 1w5b_A* 1fsz_A* 1w5e_A*
Probab=100.00 E-value=0 Score=784.40 Aligned_cols=311 Identities=44% Similarity=0.753 Sum_probs=305.1
Q ss_pred HHCCCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 54386179999668147999999985899844999825578855189970485155425567888883899999997299
Q gi|254781176|r 11 TELKPRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDAQALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAEECID 90 (502)
Q Consensus 11 ~~~~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~~~ 90 (502)
+.+++|||||||||||||+||+|++.++.+|+|||+|||+|+|+++++++|||||+++|+|+||||||++||+||+|+++
T Consensus 34 ~~~~~kIkViGvGGaG~N~vn~m~~~~~~~v~~iaiNTD~~~L~~~~a~~ki~iG~~~t~G~GaG~~pe~G~~aA~e~~~ 113 (364)
T 2vap_A 34 QQTKAKITVVGCGGAGNNTITRLKMEGIEGAKTVAINTDAQQLIRTKADKKILIGKKLTRGLGAGGNPKIGEEAAKESAE 113 (364)
T ss_dssp HTTCCCEEEEEEHHHHHHHHHHHHHHTCTTEEEEEEESBHHHHHTSCCSEEEECCTTTTTTBCCTTCHHHHHHHHHHTHH
T ss_pred HHCCCCEEEEEECCCHHHHHHHHHHCCCCCCEEEEEECCHHHHHCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 74598589998788279999999983999807999918799983599982797688766788888882789999999899
Q ss_pred HHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99997269989999803676667407899999998649849999504300040678888999999999863335450278
Q gi|254781176|r 91 EITEMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPFHFEGSRRMRVAESGIEALQETVDTLIVIPNQ 170 (502)
Q Consensus 91 ~i~~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf~~eg~~r~~~a~~~~~~l~~~~d~~i~i~n~ 170 (502)
+|+++|+++|||||+|||||||||||+||||++||++|+|||+|||+||.|||++|+++|.+||++|+++||++||||||
T Consensus 114 ~I~~~l~~~d~vfi~AGlGGGTGTGaapviA~~ake~g~l~v~ivt~PF~~EG~~r~~~A~~gl~~L~~~~D~lIvi~Nd 193 (364)
T 2vap_A 114 EIKAAIQDSDMVFITCGLGGGTGTGSAPVVAEISKKIGALTVAVVTLPFVMEGKVRMKNAMEGLERLKQHTDTLVVIPNE 193 (364)
T ss_dssp HHHHHHTTCSEEEEEEETTSSHHHHHHHHHHHHHHHTTCEEEEEEEECCGGGCHHHHHHHHHHHHHHHTTCSEEEEEEGG
T ss_pred HHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCHHCCCHHHHHHHHHHHHHHHHCCCEEEECHH
T ss_conf 99998754688999961389877657889999999759916999972812046179999999999999746826995067
Q ss_pred HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHC
Q ss_conf 88741366531899974467999999888887651665555898787876415865899876148620489999887527
Q gi|254781176|r 171 NLFRIANDKTTFADAFSMADQVLYSGVSCITDLMIKEGLINLDFADVRSVMRNMGRAMMGTGEASGHGRGIQAAEAAVAN 250 (502)
Q Consensus 171 ~l~~~~~~~~~~~~af~~~d~~l~~~v~~i~~~i~~~g~in~df~d~~~v~~~~g~a~~g~g~~~g~~r~~~a~~~a~~~ 250 (502)
||++.+. ++++.+||+++|++|.++|++|+++|++||+|||||+|||+||+++|.|+||+|+++|++|+.+|+++||+|
T Consensus 194 ~L~~~~~-~~~~~~Af~~ad~~l~~~i~~I~~ii~~~g~INvDfaDvktvm~~~G~a~iG~G~a~G~~ra~~A~~~Al~s 272 (364)
T 2vap_A 194 KLFEIVP-NMPLKLAFKVADEVLINAVKGLVELITKDGLINVDFADVKAVMNNGGLAMIGIGESDSEKRAKEAVSMALNS 272 (364)
T ss_dssp GHHHHST-TCCHHHHHHHHHHHHHHHHHHHHHHHHSCCSBCCCHHHHHHHHTTCEEEEEEEEEECSTTHHHHHHHHHHTC
T ss_pred HHHHHCC-CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHC
T ss_conf 8997616-886667778789999999754242156776202358899999846982899752016885189999999749
Q ss_pred CCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCEEEEEEEEECCCCCC
Q ss_conf 0100022455537899961688889999999999999741688639998531346575479999851355320
Q gi|254781176|r 251 PLLDEASMKGSQGLLISITGGSDLTLFEVDEAATRIREEVDSEANIILGATFDEALEGVIRVSVVATGIENRL 323 (502)
Q Consensus 251 pll~~~~~~~a~~~l~~i~~~~~~~l~e~~~~~~~i~~~~~~~a~ii~G~~~d~~~~~~~~v~~iatg~d~~~ 323 (502)
||| +.++++|+++||||+||++++|.|+++++++|++.++++++||||+++|++|++++|||||||||+...
T Consensus 273 PLL-d~~i~~Ak~vLv~I~gg~dlsl~Ei~ei~~~I~~~~~~da~Ii~G~~~d~~l~d~i~VtiIaTG~~s~~ 344 (364)
T 2vap_A 273 PLL-DVDIDGATGALIHVMGPEDLTLEEAREVVATVSSRLDPNATIIWGATIDENLENTVRVLLVITGVQSRI 344 (364)
T ss_dssp TTC-CSCGGGCCEEEEEEEECTTCCHHHHHHHHHHHHHHSCTTCEEEEEEEECTTCSSCEEEEEEEECCGGGE
T ss_pred CCC-CCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCEEEEEEEEECCCCCC
T ss_conf 664-677214655799997499998999999999999970999769982367877798389999992378555
No 6
>1w5f_A Cell division protein FTSZ; complete proteome, GTP-binding, multigene family, septation, tubulin, filament, Z-ring, GTPase, domain swapped; HET: G2P; 2.0A {Thermotoga maritima} SCOP: c.32.1.1 d.79.2.1
Probab=100.00 E-value=0 Score=770.29 Aligned_cols=316 Identities=43% Similarity=0.701 Sum_probs=306.4
Q ss_pred CCCHH-HCCCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHH
Q ss_conf 78845-43861799996681479999999858998449998255788551899704851554255678888838999999
Q gi|254781176|r 7 NMDIT-ELKPRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDAQALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAA 85 (502)
Q Consensus 7 ~~~~~-~~~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a 85 (502)
+.++. ..+.|||||||||||||+||+|++.++.+|+|+++|||+|+|..+++++||+||+++|||+|||++|++||+||
T Consensus 13 ~~~~~~~~~~kikViGvGGaG~N~vn~m~~~~~~~v~~iainTD~~~L~~~~~~~ki~iG~~~t~G~GaG~~pe~g~~aa 92 (353)
T 1w5f_A 13 NRNIPQANNLKIKVIGVGGAGNNAINRMIEIGIHGVEFVAVNTDLQVLEASNADVKIQIGENITRGLGAGGRPEIGEQAA 92 (353)
T ss_dssp ---------CCEEEEEEHHHHHHHHHHHHHHCCTTEEEEEEESCHHHHHTCCCSEEEECCTTTTTTSCCTTCHHHHHHHH
T ss_pred HCCCCCCCCCCEEEEEECCHHHHHHHHHHHCCCCCCEEEEEECCHHHHHCCCCCCEEEECCCCCCCCCCCCCHHHHHHHH
T ss_conf 23676568872899997871899999999839998479999184998825999837970786678888988843618899
Q ss_pred HHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 97299999972699899998036766674078999999986498499995043000406788889999999998633354
Q gi|254781176|r 86 EECIDEITEMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPFHFEGSRRMRVAESGIEALQETVDTLI 165 (502)
Q Consensus 86 ~~~~~~i~~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf~~eg~~r~~~a~~~~~~l~~~~d~~i 165 (502)
++++++|+++|+++|||||+||||||||||||||||++||++|+|||+|||+||.|||++|+++|++||++|++++|++|
T Consensus 93 ~e~~~~I~~~L~~~d~vfi~AGlGGGTGtGaapvIA~~Ake~g~l~vaivt~PF~~EG~~r~~~A~~gl~~L~~~~D~lI 172 (353)
T 1w5f_A 93 LESEEKIREVLQDTHMVFITAGFGGGTGTGASPVIAKIAKEMGILTVAIVTTPFYFEGPERLKKAIEGLKKLRKHVDTLI 172 (353)
T ss_dssp HHTHHHHHHHTTTCSEEEEEEETTSSHHHHHHHHHHHHHHHTTCEEEEEEEECCGGGCHHHHHHHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCHHHHCHHHHHHHHHHHHHHHHHCCCEE
T ss_conf 99899999984788879999436899766078999999998599279999688467465899999999999986458279
Q ss_pred HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC--CHHHHHHHHCCCCEEEEEEEECCCCCHHHHH
Q ss_conf 50278887413665318999744679999998888876516655558--9878787641586589987614862048999
Q gi|254781176|r 166 VIPNQNLFRIANDKTTFADAFSMADQVLYSGVSCITDLMIKEGLINL--DFADVRSVMRNMGRAMMGTGEASGHGRGIQA 243 (502)
Q Consensus 166 ~i~n~~l~~~~~~~~~~~~af~~~d~~l~~~v~~i~~~i~~~g~in~--df~d~~~v~~~~g~a~~g~g~~~g~~r~~~a 243 (502)
|||||+|++.+++++++.+||+++|++|+++|++|+++|+.||+||| ||+|||+||+++|.|+||+|+|+|++|+.+|
T Consensus 173 vi~Nd~L~~~~~~~~~~~~af~~ad~il~~~I~~I~~li~~~g~iNin~DfaDvktvl~~~G~a~iG~G~a~g~~ra~~A 252 (353)
T 1w5f_A 173 KISNNKLMEELPRDVKIKDAFLKADETLHQGVKGISELITKRGYIRLTSRFARIESVMKDAGAAILGIGVGKGEHRAREA 252 (353)
T ss_dssp EEEHHHHHTTSCTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHTTCEEEEEEEEEEESTTHHHHH
T ss_pred EECHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCEEEEEEEEECCCCHHHHH
T ss_conf 95265777764544178999999999999999999998707775313552574322341885389987543587689999
Q ss_pred HHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCC-CCEEEEEEEEECCCCC
Q ss_conf 988752701000224555378999616888899999999999997416886399985313465-7547999985135532
Q gi|254781176|r 244 AEAAVANPLLDEASMKGSQGLLISITGGSDLTLFEVDEAATRIREEVDSEANIILGATFDEAL-EGVIRVSVVATGIENR 322 (502)
Q Consensus 244 ~~~a~~~pll~~~~~~~a~~~l~~i~~~~~~~l~e~~~~~~~i~~~~~~~a~ii~G~~~d~~~-~~~~~v~~iatg~d~~ 322 (502)
+++||+||||+ .++++|+++||||+||++|+|.|+++++++|++.++++++||||+++|++| ++++|||||||||+.+
T Consensus 253 v~~Al~sPLLd-~~i~~Ak~vLv~I~gg~d~~l~Ei~e~~~~I~~~~~~da~Ii~G~~~d~~l~~d~i~VtiIATGf~~~ 331 (353)
T 1w5f_A 253 AKKAMESKLIE-HPVENASSIVFNITAPSNIRMEEVHEAAMIIRQNSSEDADVKFGLIFDDEVPDDEIRVIFIATRFPDE 331 (353)
T ss_dssp HHHHHTCTTCC-SCGGGCSEEEEEEEECTTCCHHHHHHHHHHHHTTSCTTSEEEEEEEECTTSCTTEEEEEEEEECCSCT
T ss_pred HHHHHHCCCCC-CCHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEEEEEEECCCCCC
T ss_conf 99997298756-88211653699998599998999999999999970999759980038877789959999998579965
Q ss_pred C
Q ss_conf 0
Q gi|254781176|r 323 L 323 (502)
Q Consensus 323 ~ 323 (502)
.
T Consensus 332 ~ 332 (353)
T 1w5f_A 332 D 332 (353)
T ss_dssp H
T ss_pred C
T ss_conf 4
No 7
>2r75_1 Cell division protein FTSZ; GTPase, tubulin-like, inhibitor, cell cycle; HET: 01G; 1.40A {Aquifex aeolicus} PDB: 2r6r_1*
Probab=100.00 E-value=0 Score=731.08 Aligned_cols=311 Identities=45% Similarity=0.706 Sum_probs=305.9
Q ss_pred CCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 86179999668147999999985899844999825578855189970485155425567888883899999997299999
Q gi|254781176|r 14 KPRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDAQALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAEECIDEIT 93 (502)
Q Consensus 14 ~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~~~~i~ 93 (502)
.|||+||||||||||+||+|++.++.+|+|+++|||+|+|+.+++++||+||.++|+|+|||+||++|++||+|++++|+
T Consensus 7 ~~kI~vIGvGgaG~n~v~~~~~~g~~~v~~iainTD~~~L~~~~a~~ki~iG~~~t~g~GaG~~pe~g~~aa~e~~~~i~ 86 (338)
T 2r75_1 7 PCKIKVIGVGGGGSNAVNRMYEDGIEGVELYAINTDVQHLSTLKVPNKIQIGEKVTRGLGAGAKPEVGEEAALEDIDKIK 86 (338)
T ss_dssp -CCEEEEEEHHHHHHHHHHHHHTTCCSCEEEEEESBHHHHHTCCCSEEEECCHHHHTTBCCTTCHHHHHHHHHHTHHHHH
T ss_pred CCCEEEEEECCHHHHHHHHHHHCCCCCEEEEEEECCHHHHHCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 87289999784589999999982999717999928899883699981895287666788888691577999997399999
Q ss_pred HHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 97269989999803676667407899999998649849999504300040678888999999999863335450278887
Q gi|254781176|r 94 EMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPFHFEGSRRMRVAESGIEALQETVDTLIVIPNQNLF 173 (502)
Q Consensus 94 ~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf~~eg~~r~~~a~~~~~~l~~~~d~~i~i~n~~l~ 173 (502)
+.|+++|||||+|||||||||||+||||++||++|+||++|||+||.|||++|+++|.+||++|++++|++|+||||+|+
T Consensus 87 ~~l~~~d~vfi~AGlGGGTGtGaapviA~~ak~~g~l~v~ivt~PF~~Eg~~r~~~A~~~l~~L~~~~d~~Ivi~Nd~l~ 166 (338)
T 2r75_1 87 EILRDTDMVFISAGLGGGTGTGAAPVIAKTAKEMGILTVAVATLPFRFEGPRKMEKALKGLEKLKESSDAYIVIHNDKIK 166 (338)
T ss_dssp HHHSSCSEEEEEEETTSSHHHHHHHHHHHHHHHTTCEEEEEEEECCGGGCHHHHHHHHHHHHHHHHTCSEEEEEEHHHHH
T ss_pred HHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCHHHH
T ss_conf 87510686999834688876752799999999859946999991676676379999999999999855803023226788
Q ss_pred HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCC
Q ss_conf 41366531899974467999999888887651665555898787876415865899876148620489999887527010
Q gi|254781176|r 174 RIANDKTTFADAFSMADQVLYSGVSCITDLMIKEGLINLDFADVRSVMRNMGRAMMGTGEASGHGRGIQAAEAAVANPLL 253 (502)
Q Consensus 174 ~~~~~~~~~~~af~~~d~~l~~~v~~i~~~i~~~g~in~df~d~~~v~~~~g~a~~g~g~~~g~~r~~~a~~~a~~~pll 253 (502)
+.+.+.+++.+||+++|++|.++|++|+++|+.||+||+||+|+|+||+++|.|+||+|+++|++|+.+|+++||+||||
T Consensus 167 ~~~~~~~~~~~af~~~d~~l~~~i~~I~~~i~~~g~iNvDf~Dl~~vl~~~G~a~ig~G~a~g~~r~~~Av~~Al~spLl 246 (338)
T 2r75_1 167 ELSNRTLTIKDAFKEVDSVLSKAVRGITSIVVTPAVINVDFADVRTTLEEGGLSIIGMGEGRGDEKADIAVEKAVTSPLL 246 (338)
T ss_dssp HTSCCCSSHHHHHHHHHHHHHHHHHHHHHHHHSCCSBCCCHHHHHHHHTTCEEEEEEEEEEESTTHHHHHHHHHHHCBSS
T ss_pred HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHHHHCCCC
T ss_conf 75052117899887899999999988777621777543578888988707963899998733775388999999729664
Q ss_pred CCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCEEEEEEEEECCCCCCC
Q ss_conf 00224555378999616888899999999999997416886399985313465754799998513553200
Q gi|254781176|r 254 DEASMKGSQGLLISITGGSDLTLFEVDEAATRIREEVDSEANIILGATFDEALEGVIRVSVVATGIENRLH 324 (502)
Q Consensus 254 ~~~~~~~a~~~l~~i~~~~~~~l~e~~~~~~~i~~~~~~~a~ii~G~~~d~~~~~~~~v~~iatg~d~~~~ 324 (502)
++.++++|+++||||+||++|+|.|+++++++|++.++++|+||||+++|++|++++|||||||||+....
T Consensus 247 e~~~i~~Ak~~Lv~I~g~~~~~l~ei~~i~~~i~~~~~~~a~Ii~G~~~d~~l~d~i~VtiIatG~~~~~~ 317 (338)
T 2r75_1 247 EGNTIEGARRLLVTIWTSEDIPYDIVDEVMERIHSKVHPEAEIIFGAVLEPQEQDFIRVAIVATDFPEEKF 317 (338)
T ss_dssp BSSCGGGCSEEEEEEEECTTSCTTHHHHHHHHHHHHSCTTCEEEEEEEECTTCCSEEEEEEEEECCSSCCE
T ss_pred CCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCEEEEEEEECCCCCCCC
T ss_conf 56670032104899992898989999999999999739998799803788888983899999866882114
No 8
>3m89_A FTSZ/tubulin-related protein; partition, TUBZ, GTP-binding, nucleotide-BIND structural protein; HET: GSP; 2.00A {Bacillus thuringiensis} PDB: 3m8k_A
Probab=100.00 E-value=0 Score=426.77 Aligned_cols=310 Identities=14% Similarity=0.129 Sum_probs=270.4
Q ss_pred CHHHCCCEEEEEEECCCHHHHHHHHHHCCCCC----CEEEEECCCHHHHH---HCCCCEEEEECCCCCCCCCCCCCHHHH
Q ss_conf 84543861799996681479999999858998----44999825578855---189970485155425567888883899
Q gi|254781176|r 9 DITELKPRITVFGVGGGGGNAVNNMVSSGLQG----VNFVVANTDAQALM---MSKAKQIIQLGSGITEGLGAGSHPEVG 81 (502)
Q Consensus 9 ~~~~~~~~i~v~g~gg~g~n~~~~~~~~~~~~----~~~~~~ntd~~~l~---~~~~~~~~~~g~~~~~g~g~g~~~~~g 81 (502)
.+.++..|+.|||+|+|||++++.+++.+..+ +..+|+|||.+.|. ..+.++||+|| +|.|+|.||++|
T Consensus 37 ~~~~~~~k~~~IG~GqaGgrI~d~f~~~~~~~~~~~~~~lavNTa~~DL~~L~~ip~~~ri~i~----~~~G~G~d~~~g 112 (427)
T 3m89_A 37 SVNDISIRWGVIGAGQKGNKEADLFAGYKFSNGTTCYPTLAVNFAESDMMHLQNIIKEDRIHFD----GLKGAARTPSVV 112 (427)
T ss_dssp CCCCCSSCEEEEEEHHHHHHHHHHHTTCBCTTSCBSCCEEEEESSGGGGTTCSSSCGGGEEEC---------------CH
T ss_pred HHHHHEEEEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEEEEECCHHHHHHCCCCCHHHEEEEC----CCCCCCCCHHHH
T ss_conf 6542223699996076507999999973641488511289997989999753078732079704----876778882888
Q ss_pred HHHHHHH--------H----HHHHHHH------CCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCC
Q ss_conf 9999972--------9----9999972------69989999803676667407899999998649849999504300040
Q gi|254781176|r 82 RAAAEEC--------I----DEITEML------DKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPFHFEG 143 (502)
Q Consensus 82 ~~~a~~~--------~----~~i~~~~------~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf~~eg 143 (502)
++++.+. . .+|...+ .++|+|||+|||||||||||+|++|+++|+++++++++||+||.|||
T Consensus 113 ~~~~~e~~~~~~~~~~d~~~~~i~~~~~~~~~~~~~D~v~v~aG~GGGtGtGa~pvia~~~k~~~~~~~v~v~~plp~eg 192 (427)
T 3m89_A 113 TDLFDPETNPNANGYLDKLAQELGRKFTNEEGEVIVDQFLICLGAGGGVGTGWGSLVLQLIREQFFPCPVSMLISLPSGD 192 (427)
T ss_dssp HHHHSSSSSTTHHHHHHHHHHHHHHHSBCTTSCBCCSEEEEEEETTSHHHHHHHHHHHHHHHTTCSSSCEEEEEEECCSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHEECCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCC
T ss_conf 88741002567778778789998775201345654112220012588654446999999999708980799999677675
Q ss_pred HHHHHHHHHHHHHHHHH---------------HHHHHHHHHHHHHHHCCCC---CHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 67888899999999986---------------3335450278887413665---31899974467999999888887651
Q gi|254781176|r 144 SRRMRVAESGIEALQET---------------VDTLIVIPNQNLFRIANDK---TTFADAFSMADQVLYSGVSCITDLMI 205 (502)
Q Consensus 144 ~~r~~~a~~~~~~l~~~---------------~d~~i~i~n~~l~~~~~~~---~~~~~af~~~d~~l~~~v~~i~~~i~ 205 (502)
++|+.+|..||++|+++ ||++|+|+||+|++++..+ +++.++|..+++++.+.|.++.++|+
T Consensus 193 e~~~~~A~~~l~~l~~~~~e~~~l~~~~~~~~vd~lIvidN~kl~~~~~~~~~~~~~~~~~~~a~~~in~~I~~~~~~i~ 272 (427)
T 3m89_A 193 PDEINNALVLLSEIDEFMREQDRLFGNSDIKPLANVIVNDNTQMQRIIESQKGTKDLKNRYVNWKEVANDNVVSTLHEIN 272 (427)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCTTSCCSEEEEEEEEHHHHHHHHHHSSCSSSCCCSCSCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCEEEEECCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 21889999999999999875421001100026552999547999987640367753566899999999999999999987
Q ss_pred C------CCCCCCCHHHHHHHHCC-CCEEEEEEEECCCCCHH---HHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCC
Q ss_conf 6------65555898787876415-86589987614862048---99998875270100022455537899961688889
Q gi|254781176|r 206 K------EGLINLDFADVRSVMRN-MGRAMMGTGEASGHGRG---IQAAEAAVANPLLDEASMKGSQGLLISITGGSDLT 275 (502)
Q Consensus 206 ~------~g~in~df~d~~~v~~~-~g~a~~g~g~~~g~~r~---~~a~~~a~~~pll~~~~~~~a~~~l~~i~~~~~~~ 275 (502)
. ||.+|+||+||+++|++ +|.+++|++.+++++++ ..+++.|+.+||+.+.+|++|+++|++|+|+++..
T Consensus 273 ~~~~~~~~g~v~vD~sDv~~~L~~~Gg~~~iG~a~~~~~d~~~~~~~i~~~~~~~~L~~~~di~~A~~alv~i~gp~~~~ 352 (427)
T 3m89_A 273 IIPENYGSDNVTYDPSDLIKLLSIPGRFLTIGKARIAKFDLHSLENSIKRSLDEGFFSAEHQFETATMYGGFVLRPSNAD 352 (427)
T ss_dssp HHHHHCCCSSSCCCHHHHHHHHHSSCSEEEEEEEEECSCSHHHHHHHHHHHHHSSTTCSCCCGGGCCEEEEEEEEESSCG
T ss_pred HHCCCCCCCCEEECHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCHHCCCCEEEEEECCCCCC
T ss_conf 51034788745654999999850799638853212664226789999999986198879968011610189998687520
Q ss_pred HHHHHHHHHHHHHHCCC--CCCEEEEEE-ECCCCCCEEEEEEEEECCCCC
Q ss_conf 99999999999974168--863999853-134657547999985135532
Q gi|254781176|r 276 LFEVDEAATRIREEVDS--EANIILGAT-FDEALEGVIRVSVVATGIENR 322 (502)
Q Consensus 276 l~e~~~~~~~i~~~~~~--~a~ii~G~~-~d~~~~~~~~v~~iatg~d~~ 322 (502)
+.+..++.++++..+++ +...|+|.. .++...+.|+|+||+|||...
T Consensus 353 ~~~~~e~~~~~r~~~~e~~~~~~i~g~~gd~~~~~d~V~v~vilsGv~~~ 402 (427)
T 3m89_A 353 FFKDVNTENRIRNTLGEYKRLDEIAGKFGDPIWDNEYAVCYTIFAGMTMP 402 (427)
T ss_dssp GGGCHHHHHHHHHHHTTTSCGGGSEEEEECCEESSSSEEEEEEEEEECCC
T ss_pred HHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEEEEEEECCCCC
T ss_conf 25689999999998630589648997257888878839999999468963
No 9
>1tvk_A Tubulin alpha chain; epothilone, taxol, ligand interactions, cell cycle, structural protein; HET: GDP GTP EP; 2.89A {Bos taurus} SCOP: c.32.1.1 d.79.2.1 PDB: 1tub_A* 1jff_A* 2wbe_A* 3dco_A* 3edl_A* 1ffx_A* 1ia0_A* 2hxf_A* 2hxh_A* 2p4n_A* 1sa0_A* 1sa1_A* 3edl_F* 3hke_A* 3hkc_A* 3hkd_A* 3hkb_A* 3n2g_A* 3n2k_A* 1z2b_A* ...
Probab=99.22 E-value=1.4e-10 Score=95.85 Aligned_cols=206 Identities=17% Similarity=0.199 Sum_probs=157.5
Q ss_pred EEEEEECCCHHHHHHHHHHC-----CCC---------------------------C---CEEEEECCCHHHHHHCCCCE-
Q ss_conf 79999668147999999985-----899---------------------------8---44999825578855189970-
Q gi|254781176|r 17 ITVFGVGGGGGNAVNNMVSS-----GLQ---------------------------G---VNFVVANTDAQALMMSKAKQ- 60 (502)
Q Consensus 17 i~v~g~gg~g~n~~~~~~~~-----~~~---------------------------~---~~~~~~ntd~~~l~~~~~~~- 60 (502)
|-.+-||.||+.+=..+.+. ++. + ..-|.+++|.+.+.......
T Consensus 4 iItlqvGQcGnQIG~~fw~~l~~Eh~i~~~g~~~~~~~~~~~~~~~~~fF~e~~~~~~~pRavliD~E~kvI~~i~~~~~ 83 (440)
T 1tvk_A 4 CISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTY 83 (440)
T ss_dssp EEEEEEHHHHHHHHHHHHHHHHHTTTCCTTC--------------------------CCCCCCEECSSHHHHHTTTTSTT
T ss_pred EEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEECCHHHHHHHHCCCC
T ss_conf 89996357299999999999999729797898377554455544200047877999671666999788079998855876
Q ss_pred E--EEECCCCCCCCCCCCCHHHHH-----HHHHHHHHHHHHHHCCCCE---EEEEECCCCCCCCCHHHHHHHHHHHC--C
Q ss_conf 4--851554255678888838999-----9999729999997269989---99980367666740789999999864--9
Q gi|254781176|r 61 I--IQLGSGITEGLGAGSHPEVGR-----AAAEECIDEITEMLDKTHM---CFVTAGMGGGTGTGAAPIIAKIARNK--G 128 (502)
Q Consensus 61 ~--~~~g~~~~~g~g~g~~~~~g~-----~~a~~~~~~i~~~~~~~~~---~~~~ag~gggtgtg~~p~ia~~a~~~--~ 128 (502)
+ ..--.-++.-.|+|.+--.|+ +.-++-.+.|++.++.+|- .+++-.||||||+|-.-.|.+.-|+. .
T Consensus 84 ~~~~~~~~~~~~~~gsGNNwA~Gy~~~G~~~~d~i~e~iRkevE~cD~l~gf~~~hSl~GGTGSGlGs~i~e~L~d~yp~ 163 (440)
T 1tvk_A 84 RQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFSVFHSFGGGTGSGFTSLLMERLSVDYGK 163 (440)
T ss_dssp GGGSCTTTCCCCSSCCCSCHHHHTTTTTHHHHHHHHHHHHHHHHSSSSEEEEEEECCTTSSTTTHHHHHHHHHHHTSCTT
T ss_pred CCCCCCCCEEECCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCC
T ss_conf 45467322565577876354106643567788999999999999588867667884257877662899999998876574
Q ss_pred CEEEEEEECCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH-HHHHHHHHHHHHHHHHHHHHH
Q ss_conf 849999504300--04067888899999999986333545027888741366531899-974467999999888887651
Q gi|254781176|r 129 VLTVGVVTKPFH--FEGSRRMRVAESGIEALQETVDTLIVIPNQNLFRIANDKTTFAD-AFSMADQVLYSGVSCITDLMI 205 (502)
Q Consensus 129 ~~~~~~v~~pf~--~eg~~r~~~a~~~~~~l~~~~d~~i~i~n~~l~~~~~~~~~~~~-af~~~d~~l~~~v~~i~~~i~ 205 (502)
...+.++..|+. -|-..-.=++.-.|..|.+++|.+|++.|+.|.++....+.+.. .|.-.|.|+++.+.+++.-+.
T Consensus 164 ~~~~~~~V~P~~~~~evvvq~YNtvLsl~~L~e~sd~ii~~~N~aL~~i~~~~~~~~~~~~~~~N~via~~ls~~t~~~r 243 (440)
T 1tvk_A 164 KSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLR 243 (440)
T ss_dssp SEEEECCEECCSSSCCSSSTHHHHHHHHHHHHTTCSEECBEEHHHHHHHHTTSSCCSCCCHHHHTTTTHHHHHHHTTTTT
T ss_pred CCEEEEEEECCCCCCCCCCCCCHHHHHHCCHHHCCCEEEEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCC
T ss_conf 30345797078777874142333055420032047468994249999999997089999725677899987346654320
Q ss_pred CCCCCCCCHHHHHHHHC
Q ss_conf 66555589878787641
Q gi|254781176|r 206 KEGLINLDFADVRSVMR 222 (502)
Q Consensus 206 ~~g~in~df~d~~~v~~ 222 (502)
-||..|.|+.++.+-|-
T Consensus 244 f~g~~~~~l~~~~~nLv 260 (440)
T 1tvk_A 244 FDGALNVDLTEFQTNLV 260 (440)
T ss_dssp SCSTTCCCHHHHHHHHC
T ss_pred CCCCCCCCHHHHHHCCC
T ss_conf 46445776788744267
No 10
>2btq_B Tubulin btubb; structural protein, cytoskeletal protein/complex, bacterial tubulin, cytoskeleton, polymerization, verrucomicrobia; HET: GDP; 3.2A {Prosthecobacter dejongeii}
Probab=99.22 E-value=2.7e-10 Score=93.84 Aligned_cols=206 Identities=20% Similarity=0.301 Sum_probs=150.3
Q ss_pred EEEEEECCCHHHHHHHHHHC-----CCC--------------------------C---CEEEEECCCHHHHHHCCCCE-E
Q ss_conf 79999668147999999985-----899--------------------------8---44999825578855189970-4
Q gi|254781176|r 17 ITVFGVGGGGGNAVNNMVSS-----GLQ--------------------------G---VNFVVANTDAQALMMSKAKQ-I 61 (502)
Q Consensus 17 i~v~g~gg~g~n~~~~~~~~-----~~~--------------------------~---~~~~~~ntd~~~l~~~~~~~-~ 61 (502)
|-.+-||.||+.+=+.+.+. ++. + ..-+.+++|.+.+....... +
T Consensus 4 iItlqvGQcGnQIG~~~w~~l~~Eh~i~~~g~~~~~~~~~~~~~~~~fF~e~~~~~~~pRavliD~Ep~vi~~i~~~~~~ 83 (426)
T 2btq_B 4 ILSIHVGQCGNQIADSFWRLALREHGLTEAGTLKEGSNAAANSNMEVFFHKVRDGKYVPRAVLVDLEPGVIARIEGGDMS 83 (426)
T ss_dssp EEEEEEHHHHHHHHHHHHHHHHHHHTBCTTSBBCC-------CCCTTTEEEEETTEEEECEEEEEECC------------
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEEEEECCHHHHHHHHCCCCC
T ss_conf 99995355299999999999999819898998067876311245553237879997752279997987899999768876
Q ss_pred EEEC--CCCCCCCCCCCCHHHHH-----HHHHHHHHHHHHHHCCCCE---EEEEECCCCCCCCCHHHHHHHHHHHC--C-
Q ss_conf 8515--54255678888838999-----9999729999997269989---99980367666740789999999864--9-
Q gi|254781176|r 62 IQLG--SGITEGLGAGSHPEVGR-----AAAEECIDEITEMLDKTHM---CFVTAGMGGGTGTGAAPIIAKIARNK--G- 128 (502)
Q Consensus 62 ~~~g--~~~~~g~g~g~~~~~g~-----~~a~~~~~~i~~~~~~~~~---~~~~ag~gggtgtg~~p~ia~~a~~~--~- 128 (502)
-+.- .-++..-|+|.+--.|+ ..-++-.+.|++.++.+|- .+++-.||||||+|-.-.|.+.-++. .
T Consensus 84 ~~~~~~~~i~~~~gsgnNwa~Gy~~~G~~~~d~i~d~iRk~vE~cD~l~gf~i~hSl~GGTGSGlGs~l~e~L~d~yp~~ 163 (426)
T 2btq_B 84 QLFDESSIVRKIPGAANNWARGYNVEGEKVIDQIMNVIDSAVEKTKGLQGFLMTHSIGGGSGSGLGSLILERLRQAYPKK 163 (426)
T ss_dssp CCCCTTSEEECCSCCTTCHHHHHTHHHHHHHHHHHHHHHHHHTTCSSEEEEEEEEESSSSTTTHHHHHHHHHHHTTCTTS
T ss_pred CCCCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCC
T ss_conf 65684212216878650201306331677888788999999981888774478842689876548899999999875755
Q ss_pred -CEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf -8499995043000406788889999999998633354502788874136653189997446799999988888765166
Q gi|254781176|r 129 -VLTVGVVTKPFHFEGSRRMRVAESGIEALQETVDTLIVIPNQNLFRIANDKTTFADAFSMADQVLYSGVSCITDLMIKE 207 (502)
Q Consensus 129 -~~~~~~v~~pf~~eg~~r~~~a~~~~~~l~~~~d~~i~i~n~~l~~~~~~~~~~~~af~~~d~~l~~~v~~i~~~i~~~ 207 (502)
++++.|+.-|-.-|-..-.=++.-.|..|.+++|.+|++.|+.|.++...++.-.-.|.-.|.++++.+.+++.-+.-|
T Consensus 164 ~~~~~~V~p~~~~~~~vvq~YNs~Lsl~~L~e~sd~~i~fdN~aL~~~~~~~l~~~~~~~~~N~vIa~~ls~~t~~~rf~ 243 (426)
T 2btq_B 164 RIFTFSVVPSPLISDSAVEPYNAILTLQRILDNADGAVLLDNEALFRIAKAKLNRSPNYMDLNNIIALIVSSVTASLRFP 243 (426)
T ss_dssp EEEEEEEECCGGGCCCTTHHHHHHHHHHHHHHHCSEEEEEEHHHHHHHHHHHSSSCCCHHHHHHHHHHHHHHHHHHHHSS
T ss_pred CEEEEEEECCCCCCCCEEECCHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 24668974785568841143345654542430475688803699999999863589985677788887625455555357
Q ss_pred CCCCCCHHHHHHHHC
Q ss_conf 555589878787641
Q gi|254781176|r 208 GLINLDFADVRSVMR 222 (502)
Q Consensus 208 g~in~df~d~~~v~~ 222 (502)
|..|.|+.++.+-|-
T Consensus 244 ~~~~~~l~~l~~nLv 258 (426)
T 2btq_B 244 GKLNTDLSEFVTNLV 258 (426)
T ss_dssp CSSSCSHHHHHHHHC
T ss_pred CCCCCCHHHHHHCCC
T ss_conf 555766788722367
No 11
>2bto_A Tubulin btuba; bacterial tubulin, polymerization, cytoskeleton, protein complex, cytoskeletal protein; HET: GTP; 2.5A {Prosthecobacter dejongeii} SCOP: c.32.1.1 d.79.2.1 PDB: 2btq_A*
Probab=99.19 E-value=2.1e-10 Score=94.62 Aligned_cols=207 Identities=17% Similarity=0.276 Sum_probs=152.6
Q ss_pred EEEEEEECCCHHHHHHHHHHC-----CCCC-------------------------------CEEEEECCCHHHHHHCCCC
Q ss_conf 179999668147999999985-----8998-------------------------------4499982557885518997
Q gi|254781176|r 16 RITVFGVGGGGGNAVNNMVSS-----GLQG-------------------------------VNFVVANTDAQALMMSKAK 59 (502)
Q Consensus 16 ~i~v~g~gg~g~n~~~~~~~~-----~~~~-------------------------------~~~~~~ntd~~~l~~~~~~ 59 (502)
.+-.|-||.||+.+=+.+.+. ++.. ..-|.+++|...+...+..
T Consensus 5 ~~ItiqvGQCGNQIG~~fw~~l~~EH~i~~~~~~~~~~~~~~~~~~~fF~~~~e~~~~~~~pRavlID~EpkvI~~i~~~ 84 (473)
T 2bto_A 5 NTIVVSIGQAGNQIAASFWKTVCLEHGIDPLTGQTAPGVAPRGNWSSFFSKLGESSSGSYVPRAIMVDLEPSVIDNVKAT 84 (473)
T ss_dssp EEEEEEEHHHHHHHHHHHHHHHHHHHTCCTTTCCCSSSCCCSSSGGGTEEECSCC--CCEEECEEEEESSSHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCHHHHHHHCC
T ss_conf 55999778869999999999999985879788867875444567433001243466995500269997881188886456
Q ss_pred EEEEEC--CCCCCCCCCCCCHHHHH-----HHHHHHHHHHHHHHCCCCE---EEEEECCCCCCCCCHHHHHHHHHHHC--
Q ss_conf 048515--54255678888838999-----9999729999997269989---99980367666740789999999864--
Q gi|254781176|r 60 QIIQLG--SGITEGLGAGSHPEVGR-----AAAEECIDEITEMLDKTHM---CFVTAGMGGGTGTGAAPIIAKIARNK-- 127 (502)
Q Consensus 60 ~~~~~g--~~~~~g~g~g~~~~~g~-----~~a~~~~~~i~~~~~~~~~---~~~~ag~gggtgtg~~p~ia~~a~~~-- 127 (502)
.+-+.- .-++...|+|.+--.|. ..-++-.+.|++.++.+|- .+++-.||||||+|-...|.+..++.
T Consensus 85 ~~~~f~~~n~i~~~~gsGNNwA~Gy~~~G~~~~d~i~d~IRkevE~CD~l~Gf~i~hSl~GGTGSGlGs~i~e~L~d~yp 164 (473)
T 2bto_A 85 SGSLFNPANLISRTEGAGGNFAVGYLGAGREVLPEVMSRLDYEIDKCDNVGGIIVLHAIGGGTGSGFGALLIESLKEKYG 164 (473)
T ss_dssp STTCSCGGGEEECSSCCTTCHHHHHTSHHHHHHHHHHHHHHHHHHHCSSEEEEEEEEESSSSHHHHHHHHHHHHHHHHTC
T ss_pred CCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCC
T ss_conf 65556865465667675347232344536899999999999999867884661578632688754388999999997657
Q ss_pred CCEEEEEEECCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH-HHHHHHHHHHHHHHHHHHHH
Q ss_conf 9849999504300--04067888899999999986333545027888741366531899-97446799999988888765
Q gi|254781176|r 128 GVLTVGVVTKPFH--FEGSRRMRVAESGIEALQETVDTLIVIPNQNLFRIANDKTTFAD-AFSMADQVLYSGVSCITDLM 204 (502)
Q Consensus 128 ~~~~~~~v~~pf~--~eg~~r~~~a~~~~~~l~~~~d~~i~i~n~~l~~~~~~~~~~~~-af~~~d~~l~~~v~~i~~~i 204 (502)
....+.++..|+. .|-..-.=++.-.|..|.+++|.++++.|+.|..+....+.... .|.-.|.++++.+.+++.-+
T Consensus 165 ~~~~~~~sV~P~~~~~~vvvqpYNtvLsl~~L~e~sD~ii~~dN~al~~i~~~~l~~~~~s~~~lN~vIa~~ls~~t~~~ 244 (473)
T 2bto_A 165 EIPVLSCAVLPSPQVSSVVTEPYNTVFALNTLRRSADACLIFDNEALFDLAHRKWNIESPTVDDLNLLITEALAGITASM 244 (473)
T ss_dssp SSCEEEEEEECCCCSSCEESHHHHHHHHHHHHHHTCSEEEEEEHHHHHHHHHHTSCCSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCC
T ss_conf 73237789835755587513020757647889853876897256899998876326899984542144430156776554
Q ss_pred HCCCCCCCC--HHHHHHHHC
Q ss_conf 166555589--878787641
Q gi|254781176|r 205 IKEGLINLD--FADVRSVMR 222 (502)
Q Consensus 205 ~~~g~in~d--f~d~~~v~~ 222 (502)
.-||..|.| +.++.+-|-
T Consensus 245 Rf~g~~n~~~~l~~l~~nLv 264 (473)
T 2bto_A 245 RFSGFLTVEISLRELLTNLV 264 (473)
T ss_dssp HC------CCCHHHHHHHHC
T ss_pred CCCCCCCHHHHHHHHHHCCC
T ss_conf 46864323666998875477
No 12
>3cb2_A Gamma-1-tubulin, tubulin gamma-1 chain; lattice, microtubule, nucleation, GTPase, lateral interaction, structural protein, hydrolase; HET: GDP; 2.30A {Homo sapiens} PDB: 1z5v_A* 1z5w_A*
Probab=99.11 E-value=8.8e-10 Score=89.99 Aligned_cols=267 Identities=19% Similarity=0.241 Sum_probs=174.6
Q ss_pred EEEEEECCCHHHHHHHHHHC-----CC-------------------------CC---CEEEEECCCHHHHHHCCC-----
Q ss_conf 79999668147999999985-----89-------------------------98---449998255788551899-----
Q gi|254781176|r 17 ITVFGVGGGGGNAVNNMVSS-----GL-------------------------QG---VNFVVANTDAQALMMSKA----- 58 (502)
Q Consensus 17 i~v~g~gg~g~n~~~~~~~~-----~~-------------------------~~---~~~~~~ntd~~~l~~~~~----- 58 (502)
|-.|-||+||+.+=+.+.+. ++ .+ ..-|.+++|.+.+.....
T Consensus 5 II~lqiGQcGnQIG~~~w~~l~~Eh~i~~~~~~~~~~~~~~~~~~~fF~e~~~~~~~pRav~vD~E~~vi~~i~~~~~~~ 84 (475)
T 3cb2_A 5 IITLQLGQCGNQIGFEFWKQLCAEHGISPEAIVEEFATEGTDRKDVFFYQADDEHYIPRAVLLDLEPRVIHSILNSPYAK 84 (475)
T ss_dssp EEEEEEHHHHHHHHHHHHHHHHHHTTBCTTSCBCTTCCTTSSCGGGTEEECTTSCEEECEEEEESSSHHHHHHHHSTTTT
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEECCEEEEECCHHHHHHHHCCCCCC
T ss_conf 89995576599999999999999829897888476555565444540578899826056799979747999987485435
Q ss_pred ---CEEEEECCCCCCCCCCCCCHHH----HHHHHHHHHHHHHHHHCCCC---EEEEEECCCCCCCCCHHHHHHHHHHHC-
Q ss_conf ---7048515542556788888389----99999972999999726998---999980367666740789999999864-
Q gi|254781176|r 59 ---KQIIQLGSGITEGLGAGSHPEV----GRAAAEECIDEITEMLDKTH---MCFVTAGMGGGTGTGAAPIIAKIARNK- 127 (502)
Q Consensus 59 ---~~~~~~g~~~~~g~g~g~~~~~----g~~~a~~~~~~i~~~~~~~~---~~~~~ag~gggtgtg~~p~ia~~a~~~- 127 (502)
+..+..|. .|-|||-.-.. |.+..++-.+.|++.++.+| =.+++-.||||||+|-.--|.+.-++.
T Consensus 85 ~f~~~n~~~~~---~~~g~~n~~~~gy~~g~~~~d~i~d~iRk~~E~cD~l~gf~~~~Sl~GGTGSGlGs~i~e~L~d~y 161 (475)
T 3cb2_A 85 LYNPENIYLSE---HGGGAGNNWASGFSQGEKIHEDIFDIIDREADGSDSLEGFVLCHSIAGGTGSGLGSYLLERLNDRY 161 (475)
T ss_dssp TSCGGGEEECC---TTCCCTTCHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCEEEEEEESSSSHHHHHHHHHHHHHHHHS
T ss_pred CCCHHHEEECC---CCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHC
T ss_conf 43723367625---678865314121053388899999999877741898556312310588877748899999987648
Q ss_pred -CCEEEEEEECCCCC---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH-HHHHHHHHHHHHHHHHHH
Q ss_conf -98499995043000---4067888899999999986333545027888741366531899-974467999999888887
Q gi|254781176|r 128 -GVLTVGVVTKPFHF---EGSRRMRVAESGIEALQETVDTLIVIPNQNLFRIANDKTTFAD-AFSMADQVLYSGVSCITD 202 (502)
Q Consensus 128 -~~~~~~~v~~pf~~---eg~~r~~~a~~~~~~l~~~~d~~i~i~n~~l~~~~~~~~~~~~-af~~~d~~l~~~v~~i~~ 202 (502)
....+.++..|+.+ |-..-.=++.-.|..|.+++|.++++.|+.|.++....+.+.. .|.-.|.++++.+.+++.
T Consensus 162 pk~~~~~~~V~Psp~~~~~vvvq~YNsvLsl~~L~e~sD~ii~fdN~aL~~ic~~~l~i~~p~~~d~N~vIAq~ls~~T~ 241 (475)
T 3cb2_A 162 PKKLVQTYSVFPNQDEMSDVVVQPYNSLLTLKRLTQNADCLVVLDNTALNRIATDRLHIQNPSFSQINQLVSTIMSASTT 241 (475)
T ss_dssp TTSEEEEEEEECCTTSCCSCTTHHHHHHHHHHHHHHSCSEEEEEEHHHHHHHHHHTSCCSSCCHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCC
T ss_conf 76247878886585103784141419899998888518768862479999999985599999813456888876335654
Q ss_pred HHHCCCCCCCCHHHHHHHHC-CCCEEEEEEEECCC---------C-CHHHHHHHHHHHC--CCCCCCCCC-CC----CEE
Q ss_conf 65166555589878787641-58658998761486---------2-0489999887527--010002245-55----378
Q gi|254781176|r 203 LMIKEGLINLDFADVRSVMR-NMGRAMMGTGEASG---------H-GRGIQAAEAAVAN--PLLDEASMK-GS----QGL 264 (502)
Q Consensus 203 ~i~~~g~in~df~d~~~v~~-~~g~a~~g~g~~~g---------~-~r~~~a~~~a~~~--pll~~~~~~-~a----~~~ 264 (502)
.+.-||..|.|+.++.+=|- ....-.+-+..+.= . -...+-....+.. -++. .... +. -.+
T Consensus 242 ~~Rf~~~~n~dl~~l~~nLvP~P~l~fl~~s~~P~~~~~~~~~~~~~t~~~~~~~l~~~~n~~~~-~~~~~~~~~~~la~ 320 (475)
T 3cb2_A 242 TLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMRRLLQPKNVMVS-TGRDRQTNHCYIAI 320 (475)
T ss_dssp TTSSSSCTTCSHHHHHHHHCSSTTCCEEEEEEECCC------CCSCCCHHHHHHHTTSGGGBSSC-CCCC--CCCCEEEE
T ss_pred CCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHCCCCCCEE-CCCCCCCCCHHHHH
T ss_conf 45677545788788503545588753012256663004565541267599999975050137573-68975657217879
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf 9996168888999999999999974
Q gi|254781176|r 265 LISITGGSDLTLFEVDEAATRIREE 289 (502)
Q Consensus 265 l~~i~~~~~~~l~e~~~~~~~i~~~ 289 (502)
++-+.| ++...++......++..
T Consensus 321 ~~~~RG--~~~~~~~~~~~~~l~~k 343 (475)
T 3cb2_A 321 LNIIQG--EVDPTQVHKSLQRIRER 343 (475)
T ss_dssp EEEEES--SCCHHHHHHHHHHHHHT
T ss_pred HHHHCC--CCCHHHHHHHHHHHHHH
T ss_conf 999749--98878999999998753
No 13
>1tvk_B Tubulin beta chain; epothilone, taxol, ligand interactions, cell cycle, structural protein; HET: GDP GTP EP; 2.89A {Bos taurus} SCOP: c.32.1.1 d.79.2.1 PDB: 1tub_B* 1jff_B* 1ia0_B* 1ffx_B* 1sa0_B* 1sa1_B* 2hxf_B* 2hxh_B* 2p4n_B* 2wbe_B* 3dco_B* 3edl_B* 1z2b_B* 3hke_B* 3du7_B* 3e22_B* 3hkc_B* 3hkd_B* 3hkb_B* 3n2g_B* ...
Probab=98.77 E-value=1.1e-08 Score=82.03 Aligned_cols=270 Identities=16% Similarity=0.185 Sum_probs=169.5
Q ss_pred EEEEEECCCHHHHHHHHHHCCCC---------------------C------------CEEEEECCCHHHHHHCCC--CEE
Q ss_conf 79999668147999999985899---------------------8------------449998255788551899--704
Q gi|254781176|r 17 ITVFGVGGGGGNAVNNMVSSGLQ---------------------G------------VNFVVANTDAQALMMSKA--KQI 61 (502)
Q Consensus 17 i~v~g~gg~g~n~~~~~~~~~~~---------------------~------------~~~~~~ntd~~~l~~~~~--~~~ 61 (502)
|-.|-||+||+.+=+.+.+.=.. . ..-+.+++|.+.++.... ..+
T Consensus 4 IItlqvGQcGnQiG~~~w~~l~~Eh~~~~~~~~~~~~~~~~~~~~~~F~e~~~~~~~pRav~iD~e~~vi~~i~~~~~~~ 83 (427)
T 1tvk_B 4 IVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEAAGNKYVPRAILVDLEPGTMDSVRSGPFGQ 83 (427)
T ss_dssp EEECCBHHHHHHHHHHHTTTTTGGGCBCSSSCBCCSSSSTTSSGGGTCCBSSTTSBCCSBCBBCSCTTTHHHHHTSSTTT
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCEEEEECCHHHHHHHHCCCCCC
T ss_conf 89995478799999999999999719998888078764111224553257889967145699989817999986575434
Q ss_pred E-EECCCCCCCCCCCCCHHHHH-----HHHHHHHHHHHHHHCCCCE---EEEEECCCCCCCCCHHHHHHHHHHHC-C---
Q ss_conf 8-51554255678888838999-----9999729999997269989---99980367666740789999999864-9---
Q gi|254781176|r 62 I-QLGSGITEGLGAGSHPEVGR-----AAAEECIDEITEMLDKTHM---CFVTAGMGGGTGTGAAPIIAKIARNK-G--- 128 (502)
Q Consensus 62 ~-~~g~~~~~g~g~g~~~~~g~-----~~a~~~~~~i~~~~~~~~~---~~~~ag~gggtgtg~~p~ia~~a~~~-~--- 128 (502)
+ .--.-++.-.|+|.+--.|. ..-++-.+.|++.++.+|- .+++-.||||||+|..-.|.+.-++. .
T Consensus 84 ~~~~~~~~~~~~gsgnnwa~Gy~~~g~~~~~~i~d~irk~~E~cD~l~gf~~~~Sl~GGTGSGlgs~l~e~l~d~yp~~~ 163 (427)
T 1tvk_B 84 IFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRI 163 (427)
T ss_dssp TSCSTTBCCCSSCCTTCHHHHTTTTTTTTTTTHHHHHHHHHTSSSCEEEEECEEESSSSTTTHHHHHHHHHHTTTCSSSE
T ss_pred CCCCCCEEECCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCE
T ss_conf 43776546557884104067035655889999999999998717875573434004776777588889999987625031
Q ss_pred CEEEEEEECCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH-HHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 849999504300-04067888899999999986333545027888741366531899-9744679999998888876516
Q gi|254781176|r 129 VLTVGVVTKPFH-FEGSRRMRVAESGIEALQETVDTLIVIPNQNLFRIANDKTTFAD-AFSMADQVLYSGVSCITDLMIK 206 (502)
Q Consensus 129 ~~~~~~v~~pf~-~eg~~r~~~a~~~~~~l~~~~d~~i~i~n~~l~~~~~~~~~~~~-af~~~d~~l~~~v~~i~~~i~~ 206 (502)
++++.|+ -|+. -|-..-.=++.-.|..|.+++|.+|++.||.|.++....+.... .|.-.|.++++.+.+++..+.-
T Consensus 164 ~~~~~V~-p~~~~~e~vvq~YNtiLsl~~l~e~sd~ii~~~NdaL~~ic~~~~~~~~~~~~~~N~via~~ls~~t~~~rf 242 (427)
T 1tvk_B 164 MNTFSVV-PSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRF 242 (427)
T ss_dssp ECCEEEE-CCSSCCSSSSHHHHHHHHHHHHTTTCSCEECEETTHHHHHHHTSSCCSSCCHHHHHHHHHHHHHHHTGGGSS
T ss_pred EEEEEEE-CCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCC
T ss_conf 1047985-785568704644285887999997088359922899999999862789998578789888762035433547
Q ss_pred CCCCCCCHHHHHHHHC-CCCEEEEEEEECC--CCC------HHHHHHHHHHHCCCCCC--CCCCCC--CEEEEEEECCCC
Q ss_conf 6555589878787641-5865899876148--620------48999988752701000--224555--378999616888
Q gi|254781176|r 207 EGLINLDFADVRSVMR-NMGRAMMGTGEAS--GHG------RGIQAAEAAVANPLLDE--ASMKGS--QGLLISITGGSD 273 (502)
Q Consensus 207 ~g~in~df~d~~~v~~-~~g~a~~g~g~~~--g~~------r~~~a~~~a~~~pll~~--~~~~~a--~~~l~~i~~~~~ 273 (502)
||..|.|+.++.+-|- ....-++-...+. ... .....+.+.+-++.-.. .+.+.. -...+-+.| +
T Consensus 243 ~g~~n~~l~~l~~nLvp~P~~~fl~~s~~p~~~~~~~~~~~~s~~~l~~~l~~~~~~~~~~~~~~~~~ls~~~~~RG--~ 320 (427)
T 1tvk_B 243 PGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRG--R 320 (427)
T ss_dssp CBTTCCCHHHHHHHHCSSTTCCEECEECSCCCCTTTCCCCCCCSTTHHHHHTSSSSBSSSSCGGGSCBSCCCCEEES--S
T ss_pred CCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCC--C
T ss_conf 74457778998540577855210114401201534454230769999999841431622479988625889999748--8
Q ss_pred CCHHHHHHHHHHHHHH
Q ss_conf 8999999999999974
Q gi|254781176|r 274 LTLFEVDEAATRIREE 289 (502)
Q Consensus 274 ~~l~e~~~~~~~i~~~ 289 (502)
....++.+....++.+
T Consensus 321 ~~~~~~~~~~~~~k~k 336 (427)
T 1tvk_B 321 MSMKEVDEQMLNVQNK 336 (427)
T ss_dssp CCHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHH
T ss_conf 8677899999999863
No 14
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=96.94 E-value=0.003 Score=41.73 Aligned_cols=76 Identities=20% Similarity=0.287 Sum_probs=51.3
Q ss_pred CCEEEEEEECCCH--HHHHHHHHH-CCCCCCEEEEECCCHHHHHH-----------CCCCEEEEECCCCCCCCCCCCCHH
Q ss_conf 8617999966814--799999998-58998449998255788551-----------899704851554255678888838
Q gi|254781176|r 14 KPRITVFGVGGGG--GNAVNNMVS-SGLQGVNFVVANTDAQALMM-----------SKAKQIIQLGSGITEGLGAGSHPE 79 (502)
Q Consensus 14 ~~~i~v~g~gg~g--~n~~~~~~~-~~~~~~~~~~~ntd~~~l~~-----------~~~~~~~~~g~~~~~g~g~g~~~~ 79 (502)
+.||.+||-|+.| ...+..+.. .++.+-+++-++.|...|.. ...+.+|...
T Consensus 3 ~~KI~iIGaGs~~~~~~~~~~~~~~~~l~~~ei~L~Did~~rl~~~~~~~~~~~~~~~~~~~i~~t-------------- 68 (480)
T 1obb_A 3 SVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKT-------------- 68 (480)
T ss_dssp CCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEE--------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEEE--------------
T ss_conf 865999998733306999999984757899989998698779999999999999872998289996--------------
Q ss_pred HHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCC
Q ss_conf 9999999729999997269989999803676667
Q gi|254781176|r 80 VGRAAAEECIDEITEMLDKTHMCFVTAGMGGGTG 113 (502)
Q Consensus 80 ~g~~~a~~~~~~i~~~~~~~~~~~~~ag~gggtg 113 (502)
...+++|+|+|.||++++-||-.+
T Consensus 69 ----------td~~~al~~adfVi~t~~vgg~~~ 92 (480)
T 1obb_A 69 ----------MNLDDVIIDADFVINTAMVGGHTY 92 (480)
T ss_dssp ----------SCHHHHHTTCSEEEECCCTTHHHH
T ss_pred ----------CCHHHHHCCCCEEEEEEECCCCCC
T ss_conf ----------889998479999998343288641
No 15
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=96.57 E-value=0.011 Score=37.46 Aligned_cols=133 Identities=10% Similarity=0.118 Sum_probs=78.3
Q ss_pred CCEEEEEEECCCH--HHHHHHHHHCCCCCCEEEEECCCHHHHHH--------CCCCEEEEECCCCCCCCCCCCCHHHHHH
Q ss_conf 8617999966814--79999999858998449998255788551--------8997048515542556788888389999
Q gi|254781176|r 14 KPRITVFGVGGGG--GNAVNNMVSSGLQGVNFVVANTDAQALMM--------SKAKQIIQLGSGITEGLGAGSHPEVGRA 83 (502)
Q Consensus 14 ~~~i~v~g~gg~g--~n~~~~~~~~~~~~~~~~~~ntd~~~l~~--------~~~~~~~~~g~~~~~g~g~g~~~~~g~~ 83 (502)
+.||.|||-|+.| +..+..+.......-+++.++.|...|.. ...+.++...
T Consensus 5 ~mKI~iIGaGsvg~t~~l~~~l~~~~~~~~ei~L~Did~~~~~~~~~~~~~~~~~~~~i~~t------------------ 66 (450)
T 3fef_A 5 QIKIAYIGGGSQGWARSLMSDLSIDERMSGTVALYDLDFEAAQKNEVIGNHSGNGRWRYEAV------------------ 66 (450)
T ss_dssp CEEEEEETTTCSSHHHHHHHHHHHCSSCCEEEEEECSSHHHHHHHHHHHTTSTTSCEEEEEE------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEE------------------
T ss_conf 87799999786888999999997344668829999177768888999998614899619997------------------
Q ss_pred HHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99972999999726998999980367666740789999999864984999950430004067888899999999986333
Q gi|254781176|r 84 AAEECIDEITEMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPFHFEGSRRMRVAESGIEALQETVDT 163 (502)
Q Consensus 84 ~a~~~~~~i~~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf~~eg~~r~~~a~~~~~~l~~~~d~ 163 (502)
...+++|+|+|.||+++|-||..+- ..=-+++.+.|++ -..-..-|.-++..|...+.-+++.+..
T Consensus 67 ------~d~~eal~~aD~Vv~t~~vg~~~~~---~~de~i~~~~G~~-----~~~~et~G~gG~~~a~r~i~v~~~i~~~ 132 (450)
T 3fef_A 67 ------STLKKALSAADIVIISILPGSLDDM---EVDVHLPERCGIY-----QSVGDTVGPGGIIRGLRAVPIFAEIARA 132 (450)
T ss_dssp ------SSHHHHHTTCSEEEECCCSSCHHHH---HHHHHGGGGGTCC-----CSSCSSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred ------CCHHHHHCCCCEEEECEECCCCCCH---HHHHHHHHHCCCC-----CCCCCCCCCCHHHHHHCCHHHHHHHHHH
T ss_conf ------7868984899999987424887623---4655533441734-----1346666864888762228999999999
Q ss_pred HHHH-HHHHHHHHCCC
Q ss_conf 5450-27888741366
Q gi|254781176|r 164 LIVI-PNQNLFRIAND 178 (502)
Q Consensus 164 ~i~i-~n~~l~~~~~~ 178 (502)
+--. ||=.++.+.+|
T Consensus 133 i~~~~p~a~iin~tNP 148 (450)
T 3fef_A 133 IRDYAPESWVINYTNP 148 (450)
T ss_dssp HHHHCTTSEEEECCSS
T ss_pred HHHCCCCEEEEEECCC
T ss_conf 9831998089982483
No 16
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=96.55 E-value=0.021 Score=35.50 Aligned_cols=100 Identities=19% Similarity=0.322 Sum_probs=61.1
Q ss_pred CEEEEEEE-CCCHHHHHHHHHHCCCCCCEEEEECCC---HHHHHHCCCCE----EEEECCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 61799996-681479999999858998449998255---78855189970----48515542556788888389999999
Q gi|254781176|r 15 PRITVFGV-GGGGGNAVNNMVSSGLQGVNFVVANTD---AQALMMSKAKQ----IIQLGSGITEGLGAGSHPEVGRAAAE 86 (502)
Q Consensus 15 ~~i~v~g~-gg~g~n~~~~~~~~~~~~~~~~~~ntd---~~~l~~~~~~~----~~~~g~~~~~g~g~g~~~~~g~~~a~ 86 (502)
.||.|||. |.-|..+...+...++-+ +++.++.+ .++|+...+.. +..++.
T Consensus 1 ~KV~IiGAsG~VG~~~A~~l~~~~~~~-el~L~Di~~~~g~a~Dl~~~~~~~~~~~~~~~-------------------- 59 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVS-RLTLYDIAHTPGVAADLSHIETRATVKGYLGP-------------------- 59 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCS-EEEEEESSSHHHHHHHHTTSSSSCEEEEEESG--------------------
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCCC-EEEEEECCCCHHHHHHHHCCCCCCCCCEEECC--------------------
T ss_conf 969999999869999999997189877-59999579856778887646555788649867--------------------
Q ss_pred HHHHHHHHHHCCCCEEEEEECCCCCCCCC-------HHHHHHHHHHHC-----CCEEEEEEECCC
Q ss_conf 72999999726998999980367666740-------789999999864-----984999950430
Q gi|254781176|r 87 ECIDEITEMLDKTHMCFVTAGMGGGTGTG-------AAPIIAKIARNK-----GVLTVGVVTKPF 139 (502)
Q Consensus 87 ~~~~~i~~~~~~~~~~~~~ag~gggtgtg-------~~p~ia~~a~~~-----~~~~~~~v~~pf 139 (502)
+...+.|+|+|+|+||||..-..|.- -+.++.++++.+ .. .|-+||-|-
T Consensus 60 ---~~~~~~l~daDiVVitaG~~~k~g~~R~dll~~N~~i~~~i~~~i~~~~p~~-ivivvsNPv 120 (314)
T 1mld_A 60 ---EQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDA-MICIISNPV 120 (314)
T ss_dssp ---GGHHHHHTTCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTS-EEEECSSCH
T ss_pred ---CCHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC-EEEEECCCC
T ss_conf ---9768884679889980576689999889998866899999998763258984-699954863
No 17
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=96.21 E-value=0.019 Score=35.80 Aligned_cols=99 Identities=20% Similarity=0.337 Sum_probs=64.2
Q ss_pred CCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCC-----HHHHHHCC------CCEEEEECCCCCCCCCCCCCHHHHH
Q ss_conf 861799996681479999999858998449998255-----78855189------9704851554255678888838999
Q gi|254781176|r 14 KPRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTD-----AQALMMSK------AKQIIQLGSGITEGLGAGSHPEVGR 82 (502)
Q Consensus 14 ~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd-----~~~l~~~~------~~~~~~~g~~~~~g~g~g~~~~~g~ 82 (502)
|+||.|||.|.-|..+...+...++ .+++.++.+ .++|+.+. .+.++. + .++.
T Consensus 5 ~~KI~IiGaG~VG~~~a~~l~~~~l--~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~-~---------~~~~---- 68 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALIKQL--GDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVR-G---------TNDY---- 68 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC--CEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEE-E---------ESCG----
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC--CEEEEEECCCCCCHHHHHHHHCCCCCCCCCCEEE-C---------CCCH----
T ss_conf 8879999989899999999982899--8799992899800408577667476578984793-5---------8867----
Q ss_pred HHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCC-------HHHHHHHHHHHC-----CCEEEEEEECCCC
Q ss_conf 999972999999726998999980367666740-------789999999864-----9849999504300
Q gi|254781176|r 83 AAAEECIDEITEMLDKTHMCFVTAGMGGGTGTG-------AAPIIAKIARNK-----GVLTVGVVTKPFH 140 (502)
Q Consensus 83 ~~a~~~~~~i~~~~~~~~~~~~~ag~gggtgtg-------~~p~ia~~a~~~-----~~~~~~~v~~pf~ 140 (502)
+.++++|+|+||||..-..|-- -++++.++++.+ ++ .+.|||-|-+
T Consensus 69 -----------~~~~dadivvitag~~~k~g~~R~dll~~N~~I~~~i~~~i~~~~p~~-ivlvvsNPvd 126 (321)
T 3p7m_A 69 -----------KDLENSDVVIVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNCPNA-FVICITNPLD 126 (321)
T ss_dssp -----------GGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTC-EEEECCSSHH
T ss_pred -----------HHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC-EEEEECCCHH
T ss_conf -----------882789899980676899999889999989999999999998638885-8999369616
No 18
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=96.15 E-value=0.0063 Score=39.34 Aligned_cols=100 Identities=26% Similarity=0.314 Sum_probs=64.6
Q ss_pred CCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCC-----HHHHHHCCC------CEEEEECCCCCCCCCCCCCHHHHH
Q ss_conf 861799996681479999999858998449998255-----788551899------704851554255678888838999
Q gi|254781176|r 14 KPRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTD-----AQALMMSKA------KQIIQLGSGITEGLGAGSHPEVGR 82 (502)
Q Consensus 14 ~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd-----~~~l~~~~~------~~~~~~g~~~~~g~g~g~~~~~g~ 82 (502)
+.||.|||.|+-|..+...+...++ .+++.++.+ .++++.+.+ ..++ .+. +
T Consensus 4 ~~KV~IiGaG~VG~~~a~~l~~~~~--~el~L~D~~~~~a~G~a~DL~h~~~~~~~~~~~-~~~---------~------ 65 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQKNL--GDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKV-SGS---------N------ 65 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC--CEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCE-EEE---------C------
T ss_pred CCEEEEECCCHHHHHHHHHHHCCCC--CEEEEECCCCCCHHHHHHHHHCCCCCCCCCCEE-ECC---------C------
T ss_conf 9979998979899999999971899--879998689981166988875305346888689-538---------8------
Q ss_pred HHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCC------------HHHHHHHHHHHC----CCEEEEEEECCCC
Q ss_conf 999972999999726998999980367666740------------789999999864----9849999504300
Q gi|254781176|r 83 AAAEECIDEITEMLDKTHMCFVTAGMGGGTGTG------------AAPIIAKIARNK----GVLTVGVVTKPFH 140 (502)
Q Consensus 83 ~~a~~~~~~i~~~~~~~~~~~~~ag~gggtgtg------------~~p~ia~~a~~~----~~~~~~~v~~pf~ 140 (502)
..+.+.++|+|+||||.--..|-. -++++.++++.. ---.+.|||-|-+
T Consensus 66 ---------~~~~~~~adivvitag~~rkpG~t~~~~~R~dl~~~Na~I~~~i~~~i~~~~p~aivlvvsNPvd 130 (322)
T 1t2d_A 66 ---------TYDDLAGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVTNPVD 130 (322)
T ss_dssp ---------CGGGGTTCSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSSHH
T ss_pred ---------CHHHHCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHCHHHHHHHHHHHHHCCCCEEEEEECCCCH
T ss_conf ---------97896586289962432337897655447889876331788999999871199749998069713
No 19
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=96.14 E-value=0.05 Score=32.73 Aligned_cols=103 Identities=18% Similarity=0.255 Sum_probs=62.4
Q ss_pred CC--EEEEEEE-CCCHHHHHHHHHHCCCCCCEEEEECCC---HHHHHHCCC--C--EEEEECCCCCCCCCCCCCHHHHHH
Q ss_conf 86--1799996-681479999999858998449998255---788551899--7--048515542556788888389999
Q gi|254781176|r 14 KP--RITVFGV-GGGGGNAVNNMVSSGLQGVNFVVANTD---AQALMMSKA--K--QIIQLGSGITEGLGAGSHPEVGRA 83 (502)
Q Consensus 14 ~~--~i~v~g~-gg~g~n~~~~~~~~~~~~~~~~~~ntd---~~~l~~~~~--~--~~~~~g~~~~~g~g~g~~~~~g~~ 83 (502)
+| ||.|||. |..|..+...+...++-+ +++.++.+ .++|+.+.+ . .+..++
T Consensus 6 ~~~~KV~IIGaaG~VG~~~A~~l~~~~l~~-el~LiDi~~a~g~a~Dl~~~~~~~~~~~~~~------------------ 66 (326)
T 1smk_A 6 APGFKVAILGAAGGIGQPLAMLMKMNPLVS-VLHLYDVVNAPGVTADISHMDTGAVVRGFLG------------------ 66 (326)
T ss_dssp --CEEEEEETTTSTTHHHHHHHHHHCTTEE-EEEEEESSSHHHHHHHHHTSCSSCEEEEEES------------------
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCCC-EEEEECCCCCHHHHHHHHHCCCCCCCCEEEC------------------
T ss_conf 999869999899869999999998289978-7999538984577998870534477764866------------------
Q ss_pred HHHHHHHHHHHHHCCCCEEEEEECCCCCCCCC-------HHHHHHHHHHHC----CCEEEEEEECCCC
Q ss_conf 99972999999726998999980367666740-------789999999864----9849999504300
Q gi|254781176|r 84 AAEECIDEITEMLDKTHMCFVTAGMGGGTGTG-------AAPIIAKIARNK----GVLTVGVVTKPFH 140 (502)
Q Consensus 84 ~a~~~~~~i~~~~~~~~~~~~~ag~gggtgtg-------~~p~ia~~a~~~----~~~~~~~v~~pf~ 140 (502)
.....+.|.++|+|+||||..-..|.- -++++.++++.+ ---.+-|||-|-.
T Consensus 67 -----~~~~~~~~~daDiVVitaG~~~k~g~sR~dll~~N~~I~~~i~~~i~~~~~~~iiivVtNPvD 129 (326)
T 1smk_A 67 -----QQQLEAALTGMDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLISNPVN 129 (326)
T ss_dssp -----HHHHHHHHTTCSEEEECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHH
T ss_pred -----CCCCHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCH
T ss_conf -----898089857999999858989998997889998777899999999863167618999738613
No 20
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii ME49} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 1sov_A 1sow_A* 3czm_A*
Probab=95.84 E-value=0.056 Score=32.35 Aligned_cols=100 Identities=23% Similarity=0.295 Sum_probs=62.7
Q ss_pred CCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCC-----HHHHHHC------CCCEEEEECCCCCCCCCCCCCHHHHH
Q ss_conf 861799996681479999999858998449998255-----7885518------99704851554255678888838999
Q gi|254781176|r 14 KPRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTD-----AQALMMS------KAKQIIQLGSGITEGLGAGSHPEVGR 82 (502)
Q Consensus 14 ~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd-----~~~l~~~------~~~~~~~~g~~~~~g~g~g~~~~~g~ 82 (502)
++||.|||.|.-|.++-..+...++. +++.++.+ .++|+.+ ....++.-+
T Consensus 9 ~~KI~IiGaG~VG~~~A~~l~~~~l~--el~LiDi~~~~~~g~alDL~h~~~~~~~~~~i~~~----------------- 69 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALRELA--DVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAE----------------- 69 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCC--EEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEE-----------------
T ss_pred CCCEEEECCCHHHHHHHHHHHCCCCC--EEEEEECCCCCCHHHHHHHHCCCCCCCCCEEEEEC-----------------
T ss_conf 99389989798999999999718998--79999089980288999886701137996699817-----------------
Q ss_pred HHHHHHHHHHHHHHCCCCEEEEEECCCCCCC------C------CHHHHHHHHHHHC-----CCEEEEEEECCCC
Q ss_conf 9999729999997269989999803676667------4------0789999999864-----9849999504300
Q gi|254781176|r 83 AAAEECIDEITEMLDKTHMCFVTAGMGGGTG------T------GAAPIIAKIARNK-----GVLTVGVVTKPFH 140 (502)
Q Consensus 83 ~~a~~~~~~i~~~~~~~~~~~~~ag~gggtg------t------g~~p~ia~~a~~~-----~~~~~~~v~~pf~ 140 (502)
....+.+.++|+|+||||..-..| | .-+.++.++++.. +.+ +-|||-|-+
T Consensus 70 -------~~~~~~~~~adivvitag~~rkpG~~~~~~sR~dll~~N~~I~~~i~~~i~~~~p~~i-vlvvtNPvd 136 (331)
T 1pzg_A 70 -------YSYEAALTGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTF-IIVVTNPLD 136 (331)
T ss_dssp -------CSHHHHHTTCSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCE-EEECCSSHH
T ss_pred -------CCHHHHHCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEE-EEEECCCHH
T ss_conf -------9837761678289970322125898877779999998747799999998860599619-999458256
No 21
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initiative; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=95.79 E-value=0.02 Score=35.56 Aligned_cols=115 Identities=14% Similarity=0.120 Sum_probs=64.5
Q ss_pred CCEEEEEEECCCHH--HHHHHHHH-CCCCCCEEEEECCC--HHHHHHC-----------CCCEEEEECCCCCCCCCCCCC
Q ss_conf 86179999668147--99999998-58998449998255--7885518-----------997048515542556788888
Q gi|254781176|r 14 KPRITVFGVGGGGG--NAVNNMVS-SGLQGVNFVVANTD--AQALMMS-----------KAKQIIQLGSGITEGLGAGSH 77 (502)
Q Consensus 14 ~~~i~v~g~gg~g~--n~~~~~~~-~~~~~~~~~~~ntd--~~~l~~~-----------~~~~~~~~g~~~~~g~g~g~~ 77 (502)
+.||.+||-|+.+- .+...+.. ..+.+.+++-++.| ...|... ..+.+|..+
T Consensus 7 ~~KI~iIGaGS~~~~~~~~~~~~~~~~l~~~ei~L~Di~~~~~rl~~~~~~~~~~~~~~~~~~~v~~~------------ 74 (450)
T 1s6y_A 7 RLKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHLT------------ 74 (450)
T ss_dssp CEEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEEE------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEE------------
T ss_conf 88699999875678999999997331168998999869988888999999999999861998299996------------
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHH
Q ss_conf 38999999972999999726998999980367666740789999999864984999950430004067888899999999
Q gi|254781176|r 78 PEVGRAAAEECIDEITEMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPFHFEGSRRMRVAESGIEAL 157 (502)
Q Consensus 78 ~~~g~~~a~~~~~~i~~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf~~eg~~r~~~a~~~~~~l 157 (502)
...+++|+|+|+||+++|-||--+ --.-=++.++.|++- + ..=|.-++-.|...+.-+
T Consensus 75 ------------tD~~~Al~~ad~Vv~t~~vg~~~~---~~~D~~ip~k~Gi~~-~------eT~G~GG~~~alRtipv~ 132 (450)
T 1s6y_A 75 ------------LDRRRALDGADFVTTQFRVGGLEA---RAKDERIPLKYGVIG-Q------ETNGPGGLFKGLRTIPVI 132 (450)
T ss_dssp ------------SCHHHHHTTCSEEEECCCTTHHHH---HHHHHHTGGGGTCCC-C------SSSTHHHHHHHHHHHHHH
T ss_pred ------------CCHHHHHCCCCEEEECCCCCCCCC---CHHHHHHHHHCCCCC-C------CCCCCCHHHHHHCCHHHH
T ss_conf ------------898998489999998967588875---047653134328221-2------344510798862228899
Q ss_pred HHHHH
Q ss_conf 98633
Q gi|254781176|r 158 QETVD 162 (502)
Q Consensus 158 ~~~~d 162 (502)
++.+.
T Consensus 133 ~~i~~ 137 (450)
T 1s6y_A 133 LDIIR 137 (450)
T ss_dssp HHHHH
T ss_pred HHHHH
T ss_conf 99999
No 22
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, PSI-2, protein structure initiative; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=95.71 E-value=0.11 Score=30.14 Aligned_cols=93 Identities=22% Similarity=0.174 Sum_probs=63.3
Q ss_pred CCCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHC-CCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 38617999966814799999998589984499982557885518-99704851554255678888838999999972999
Q gi|254781176|r 13 LKPRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDAQALMMS-KAKQIIQLGSGITEGLGAGSHPEVGRAAAEECIDE 91 (502)
Q Consensus 13 ~~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~~~l~~~-~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~~~~ 91 (502)
-+.||.|+|.|+-|.-++..|...+. .++.+++.+...+... ....+...+ | ..+.+.
T Consensus 4 m~~kI~ViGaG~vG~~va~~L~~~~~--~~v~~~dr~~~~~~~~~~~~~~~~~~-----------d--------~~d~~~ 62 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTSSN--YSVTVADHDLAALAVLNRMGVATKQV-----------D--------AKDEAG 62 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHCSS--EEEEEEESCHHHHHHHHTTTCEEEEC-----------C--------TTCHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCC--CCEEEECCCHHHHHHCCCCCCCCCCC-----------C--------CCCHHH
T ss_conf 60788998679999999999987899--84786126566641000122221112-----------4--------489999
Q ss_pred HHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEE
Q ss_conf 99972699899998036766674078999999986498499
Q gi|254781176|r 92 ITEMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTV 132 (502)
Q Consensus 92 i~~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~ 132 (502)
+++.+.+.|+|+.+. ..-...-|++.|.+.|+-.+
T Consensus 63 l~~~l~~~DvVi~~~------p~~~~~~ia~aa~~~g~~~~ 97 (118)
T 3ic5_A 63 LAKALGGFDAVISAA------PFFLTPIIAKAAKAAGAHYF 97 (118)
T ss_dssp HHHHTTTCSEEEECS------CGGGHHHHHHHHHHTTCEEE
T ss_pred HHHHHCCCCEEEECC------CCCCCHHHHHHHHHHCCCEE
T ss_conf 999985998999837------83045999999999099979
No 23
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=95.56 E-value=0.14 Score=29.42 Aligned_cols=102 Identities=18% Similarity=0.242 Sum_probs=64.8
Q ss_pred CCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCHH-----HH--HHCCC--CEEEEECCCCCCCCCCCCCHHHHHHH
Q ss_conf 86179999668147999999985899844999825578-----85--51899--70485155425567888883899999
Q gi|254781176|r 14 KPRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDAQ-----AL--MMSKA--KQIIQLGSGITEGLGAGSHPEVGRAA 84 (502)
Q Consensus 14 ~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~~-----~l--~~~~~--~~~~~~g~~~~~g~g~g~~~~~g~~~ 84 (502)
.+||.|||.|.-|..+...+...++. -+++.++.+.. ++ ..+.. ...+.++. ++.
T Consensus 6 ~~KV~IiGaG~VG~~~a~~l~~~~~~-~el~L~Di~~~~~~g~a~DL~h~~~~~~~~~~~~~---------~~~------ 69 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIA-DEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWH---------GDY------ 69 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCC-SEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEE---------CCG------
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCC-CEEEEEECCCCCCHHHHHHHHCCCCCCCCCEEEEC---------CCH------
T ss_conf 98699989798999999999817998-87999917898306584776524302699738835---------987------
Q ss_pred HHHHHHHHHHHHCCCCEEEEEECCCCCCCC-------CHHHHHHHHHHHCC----CEEEEEEECCCC
Q ss_conf 997299999972699899998036766674-------07899999998649----849999504300
Q gi|254781176|r 85 AEECIDEITEMLDKTHMCFVTAGMGGGTGT-------GAAPIIAKIARNKG----VLTVGVVTKPFH 140 (502)
Q Consensus 85 a~~~~~~i~~~~~~~~~~~~~ag~gggtgt-------g~~p~ia~~a~~~~----~~~~~~v~~pf~ 140 (502)
+.++++|+|+||||.--..|. .-++++.++++.+. --.+.|||-|-+
T Consensus 70 ---------~~~~~aDivvitag~~~k~g~~R~dll~~Na~I~~~~~~~i~~~~p~~~vivvsNPvd 127 (316)
T 1ldn_A 70 ---------DDCRDADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVATNPVD 127 (316)
T ss_dssp ---------GGTTTCSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECSSSHH
T ss_pred ---------HHHCCCCEEEECCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCEEEEEECCCCC
T ss_conf ---------8947899999847988998988689987460478999999863389729999348863
No 24
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=95.46 E-value=0.1 Score=30.40 Aligned_cols=102 Identities=15% Similarity=0.148 Sum_probs=65.0
Q ss_pred EEEEEE-CCCHHHHHHHHHHCCCCCCEEEEE--CCCH-HHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 799996-681479999999858998449998--2557-885518997048515542556788888389999999729999
Q gi|254781176|r 17 ITVFGV-GGGGGNAVNNMVSSGLQGVNFVVA--NTDA-QALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAEECIDEI 92 (502)
Q Consensus 17 i~v~g~-gg~g~n~~~~~~~~~~~~~~~~~~--ntd~-~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~~~~i 92 (502)
|.|+|- |.-|..++..+.+.+. +.+.+++ |++. ++|..-. .++..|. ..+.+.+
T Consensus 2 IlVtGaTG~iG~~vv~~L~~~~~-g~~V~~~~R~~~~~~~l~~~~--v~~~~~D-------------------~~d~~~l 59 (286)
T 2zcu_A 2 IAITGATGQLGHYVIESLMKTVP-ASQIVAIVRNPAKAQALAAQG--ITVRQAD-------------------YGDEAAL 59 (286)
T ss_dssp EEEESTTSHHHHHHHHHHTTTSC-GGGEEEEESCTTTCHHHHHTT--CEEEECC-------------------TTCHHHH
T ss_pred EEEECCCCHHHHHHHHHHHHCCC-CCEEEEEECCHHHHHHHHHCC--CEEEEEC-------------------CCCHHHH
T ss_conf 89999885799999999984499-987999978968713442089--7899961-------------------8886669
Q ss_pred HHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCC
Q ss_conf 997269989999803676667407899999998649849999504300
Q gi|254781176|r 93 TEMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPFH 140 (502)
Q Consensus 93 ~~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf~ 140 (502)
.++++|.|.||.+++...+...-.+-.+.+.|++.|+-.+.+.+.+..
T Consensus 60 ~~a~~g~d~v~~~~~~~~~~~~~~~~~~i~aa~~~gv~~~v~~S~~~~ 107 (286)
T 2zcu_A 60 TSALQGVEKLLLISSSEVGQRAPQHRNVINAAKAAGVKFIAYTSLLHA 107 (286)
T ss_dssp HHHTTTCSEEEECC--------CHHHHHHHHHHHHTCCEEEEEEETTT
T ss_pred HHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCC
T ss_conf 999963766999515443301678999999999669747865312454
No 25
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=95.36 E-value=0.017 Score=36.10 Aligned_cols=105 Identities=21% Similarity=0.312 Sum_probs=64.1
Q ss_pred EEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCC-----HHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 1799996681479999999858998449998255-----78855189970485155425567888883899999997299
Q gi|254781176|r 16 RITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTD-----AQALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAEECID 90 (502)
Q Consensus 16 ~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd-----~~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~~~ 90 (502)
||.|||.|..|......+...++. -+++.++.+ .++|+.+.+.........++. +++
T Consensus 2 KI~IiGaG~VG~~~a~~l~~~~~~-~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~~i~~----~~~------------- 63 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLA-RELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTG----SND------------- 63 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCC-SEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEE----ESC-------------
T ss_pred EEEEECCCHHHHHHHHHHHHCCCC-CCEEEECCCCCCCHHHHHHHHCCCCCCCCCCEEEC----CCC-------------
T ss_conf 799999698999999999827999-81599737998205799886644765678747966----886-------------
Q ss_pred HHHHHHCCCCEEEEEECCCCCCCCC-------HHHHHHHHHHHC----CCEEEEEEECCCC
Q ss_conf 9999726998999980367666740-------789999999864----9849999504300
Q gi|254781176|r 91 EITEMLDKTHMCFVTAGMGGGTGTG-------AAPIIAKIARNK----GVLTVGVVTKPFH 140 (502)
Q Consensus 91 ~i~~~~~~~~~~~~~ag~gggtgtg-------~~p~ia~~a~~~----~~~~~~~v~~pf~ 140 (502)
.+.+.++|+|+||||.--..|-- -++++.++++.. ---.+.+||=|-+
T Consensus 64 --~~~~~dadivvitag~~~k~g~~R~dll~~N~~I~~~i~~~i~~~~~~~ivlvvtNPvd 122 (310)
T 1guz_A 64 --YADTANSDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVSNPLD 122 (310)
T ss_dssp --GGGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECCSSHH
T ss_pred --HHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHH
T ss_conf --78836898899950068898998899999999999999877415699829997688517
No 26
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=95.15 E-value=0.16 Score=28.99 Aligned_cols=100 Identities=21% Similarity=0.284 Sum_probs=58.8
Q ss_pred CCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCC-----HHHHHHC------CCCEEEEECCCCCCCCCCCCCHHHHH
Q ss_conf 861799996681479999999858998449998255-----7885518------99704851554255678888838999
Q gi|254781176|r 14 KPRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTD-----AQALMMS------KAKQIIQLGSGITEGLGAGSHPEVGR 82 (502)
Q Consensus 14 ~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd-----~~~l~~~------~~~~~~~~g~~~~~g~g~g~~~~~g~ 82 (502)
++||.|||.|.-|..+.-.+...++ .+++.++.+ .++++.+ ..+.++. + .+++
T Consensus 14 r~KV~IiGaG~VG~~~A~~l~~~~~--~el~L~Di~~~~~~g~a~Dl~h~~~~~~~~~~v~-~---------~~~~---- 77 (328)
T 2hjr_A 14 RKKISIIGAGQIGSTIALLLGQKDL--GDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIF-G---------ENNY---- 77 (328)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC--CEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEE-E---------ESCG----
T ss_pred CCEEEEECCCHHHHHHHHHHHCCCC--CEEEEECCCCCCCHHHHHHHHHHCCCCCCCEEEE-E---------CCCH----
T ss_conf 5709999979899999999967999--8799985899830468589774052479974998-5---------7966----
Q ss_pred HHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC---CH----HHHHHHHHHHC----CCEEEEEEECCCC
Q ss_conf 99997299999972699899998036766674---07----89999999864----9849999504300
Q gi|254781176|r 83 AAAEECIDEITEMLDKTHMCFVTAGMGGGTGT---GA----APIIAKIARNK----GVLTVGVVTKPFH 140 (502)
Q Consensus 83 ~~a~~~~~~i~~~~~~~~~~~~~ag~gggtgt---g~----~p~ia~~a~~~----~~~~~~~v~~pf~ 140 (502)
+.+.++|+|+||||.--..|. .. ++++..+++.. ---.+.|||=|-+
T Consensus 78 -----------~~~~~adiVvitag~~~k~g~~R~dll~~N~~I~~~i~~~i~~~~p~~ivlvvtNPvd 135 (328)
T 2hjr_A 78 -----------EYLQNSDVVIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYCPNAFVICITNPLD 135 (328)
T ss_dssp -----------GGGTTCSEEEECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHH
T ss_pred -----------HHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCH
T ss_conf -----------8846787899971368999998888876017899999999864389809998068510
No 27
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=95.15 E-value=0.12 Score=29.96 Aligned_cols=100 Identities=17% Similarity=0.235 Sum_probs=62.9
Q ss_pred CCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEEC--CC---HHHHHHCCC------CEEEEECCCCCCCCCCCCCHHHHH
Q ss_conf 8617999966814799999998589984499982--55---788551899------704851554255678888838999
Q gi|254781176|r 14 KPRITVFGVGGGGGNAVNNMVSSGLQGVNFVVAN--TD---AQALMMSKA------KQIIQLGSGITEGLGAGSHPEVGR 82 (502)
Q Consensus 14 ~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~n--td---~~~l~~~~~------~~~~~~g~~~~~g~g~g~~~~~g~ 82 (502)
+.||.|||.|.-|......+...++ .+++.++ .+ .++|+.+.+ +.++.- .++.
T Consensus 2 ~~KV~iiGaG~VG~~~a~~l~~~~l--~el~L~D~~~~~~~g~a~DL~~~~~~~~~~~~v~~----------~~~~---- 65 (309)
T 1ur5_A 2 RKKISIIGAGFVGSTTAHWLAAKEL--GDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTG----------TNNY---- 65 (309)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC--SEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEE----------ESCG----
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC--CEEEEECCCCCHHHHHHHHHHHHHCCCCCCCEEEE----------CCCH----
T ss_conf 9749999979899999999984899--87999808987115389888722112688867971----------5998----
Q ss_pred HHHHHHHHHHHHHHCCCCEEEEEECCCCCCC---CC----HHHHHHHHHHHCC----CEEEEEEECCCC
Q ss_conf 9999729999997269989999803676667---40----7899999998649----849999504300
Q gi|254781176|r 83 AAAEECIDEITEMLDKTHMCFVTAGMGGGTG---TG----AAPIIAKIARNKG----VLTVGVVTKPFH 140 (502)
Q Consensus 83 ~~a~~~~~~i~~~~~~~~~~~~~ag~gggtg---tg----~~p~ia~~a~~~~----~~~~~~v~~pf~ 140 (502)
+.+.++|+|+||||..-..| .. -++++.+++.... --.+.|||-|-+
T Consensus 66 -----------~~~~dadivvitag~~~kpg~~R~dll~~Na~i~k~i~~~i~~~~p~~~v~vvtNPvd 123 (309)
T 1ur5_A 66 -----------ADTANSDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVNNPLD 123 (309)
T ss_dssp -----------GGGTTCSEEEECCCC--------CHHHHHHHHHHHHHHHHHGGGCTTCEEEECCSSHH
T ss_pred -----------HHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCC
T ss_conf -----------9968999999868988999988788877679999999878763299809999468710
No 28
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 1llc_A*
Probab=95.14 E-value=0.085 Score=30.98 Aligned_cols=105 Identities=16% Similarity=0.162 Sum_probs=61.5
Q ss_pred CCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCH-----HHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 8617999966814799999998589984499982557-----88551899704851554255678888838999999972
Q gi|254781176|r 14 KPRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDA-----QALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAEEC 88 (502)
Q Consensus 14 ~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~-----~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~ 88 (502)
.+||.|||.|+-|......+...++. -++..++.+. ++++.+.+... .+.. . -.+++++
T Consensus 9 ~~KV~IiGaG~VG~~la~~l~~~~l~-~el~L~Di~~~~~~G~a~DL~h~~~~--~~~~---~-~~~~d~~--------- 72 (326)
T 2zqz_A 9 HQKVILVGDGAVGSSYAYAMVLQGIA-QEIGIVDIFKDKTKGDAIDLSNALPF--TSPK---K-IYSAEYS--------- 72 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCC-SEEEEECSCHHHHHHHHHHHHTTGGG--SCCC---E-EEECCGG---------
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCC-CEEEEEECCCCCCHHHHHHHHCCCCC--CCCC---E-EECCCHH---------
T ss_conf 98799989798999999999857998-88999906888562388987625313--6985---6-7269868---------
Q ss_pred HHHHHHHHCCCCEEEEEECCCCCCCC-------CHHHHHHHHHHHCC----CEEEEEEECCCC
Q ss_conf 99999972699899998036766674-------07899999998649----849999504300
Q gi|254781176|r 89 IDEITEMLDKTHMCFVTAGMGGGTGT-------GAAPIIAKIARNKG----VLTVGVVTKPFH 140 (502)
Q Consensus 89 ~~~i~~~~~~~~~~~~~ag~gggtgt-------g~~p~ia~~a~~~~----~~~~~~v~~pf~ 140 (502)
.++++|+|+|+||.--..|- .-++++.++++.+. --.+.+||-|-+
T Consensus 73 ------~~~daDvvvi~ag~prkpg~~R~dll~~Na~I~~~~~~~i~~~~p~~~vivvsNPvd 129 (326)
T 2zqz_A 73 ------DAKDADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANPVD 129 (326)
T ss_dssp ------GGGGCSEEEECCCCC-----CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEECSSSHH
T ss_pred ------HHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCH
T ss_conf ------846964999878988998989789864246999998755302589729999168614
No 29
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=95.07 E-value=0.16 Score=29.01 Aligned_cols=98 Identities=26% Similarity=0.360 Sum_probs=64.1
Q ss_pred EEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCH-----HHHHHCC-----CCEEEEECCCCCCCCCCCCCHHHHHHHH
Q ss_conf 17999966814799999998589984499982557-----8855189-----9704851554255678888838999999
Q gi|254781176|r 16 RITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDA-----QALMMSK-----AKQIIQLGSGITEGLGAGSHPEVGRAAA 85 (502)
Q Consensus 16 ~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~-----~~l~~~~-----~~~~~~~g~~~~~g~g~g~~~~~g~~~a 85 (502)
||.|||.|+-|......+...++. -++..++.+. ++++.+. ...++. .++++
T Consensus 2 KV~IiGaG~VG~~~a~~l~~~~~~-~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~i~-----------~~~~~------ 63 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFA-REMVLIDVDKKRAEGDALDLIHGTPFTRRANIY-----------AGDYA------ 63 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCC-SEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEE-----------ECCGG------
T ss_pred EEEEECCCHHHHHHHHHHHHCCCC-CEEEEECCCCCCCHHHHHHHHCCCCCCCCCEEE-----------CCCHH------
T ss_conf 799999798999999999837998-879998588873441899886746457887582-----------39879------
Q ss_pred HHHHHHHHHHHCCCCEEEEEECCCCCCCCC-------HHHHHHHHHHHC----CCEEEEEEECCCC
Q ss_conf 972999999726998999980367666740-------789999999864----9849999504300
Q gi|254781176|r 86 EECIDEITEMLDKTHMCFVTAGMGGGTGTG-------AAPIIAKIARNK----GVLTVGVVTKPFH 140 (502)
Q Consensus 86 ~~~~~~i~~~~~~~~~~~~~ag~gggtgtg-------~~p~ia~~a~~~----~~~~~~~v~~pf~ 140 (502)
.++|+|+|+||||.--..|.- -+.++.++++.+ ---.+.|||-|-+
T Consensus 64 ---------~~~~adivvitag~~~kpg~~R~dll~~Na~I~~~i~~~i~~~~p~~~vlvvsNPvd 120 (319)
T 1a5z_A 64 ---------DLKGSDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVTNPVD 120 (319)
T ss_dssp ---------GGTTCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHH
T ss_pred ---------HHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHH
T ss_conf ---------947999999868998999998789876226788889999984299838999348625
No 30
>2yva_A DNAA initiator-associating protein DIAA; intermolecular disulfide bonding, putative phosphosugar binding protein, DNAA binding protein; 1.85A {Escherichia coli}
Probab=94.99 E-value=0.089 Score=30.84 Aligned_cols=120 Identities=17% Similarity=0.208 Sum_probs=75.4
Q ss_pred CEEEEEEECCCHHHHH---HHHHHC---CCCCCEEEEECCCHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 6179999668147999---999985---8998449998255788551899704851554255678888838999999972
Q gi|254781176|r 15 PRITVFGVGGGGGNAV---NNMVSS---GLQGVNFVVANTDAQALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAEEC 88 (502)
Q Consensus 15 ~~i~v~g~gg~g~n~~---~~~~~~---~~~~~~~~~~ntd~~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~ 88 (502)
-||.++|.||.+.++- ..|... .-.+...+++++|...+.....+. |. ..--
T Consensus 42 ~kI~~~GnGgSa~~A~h~a~~l~~~~~~~r~~l~ai~l~~~~~~~ta~~nD~----~~------------------~~~f 99 (196)
T 2yva_A 42 NKILCCGNGTSAANAQHFAASMINRFETERPSLPAIALNTDNVVLTAIANDR----LH------------------DEVY 99 (196)
T ss_dssp CCEEEEESTHHHHHHHHHHHHHHTCSSSCCCCCCEEESSCCHHHHHHHTTST----TG------------------GGHH
T ss_pred CEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHCCCCCCH----HH------------------HHHH
T ss_conf 9899998867288999999998661002566704897267703202223733----68------------------8999
Q ss_pred HHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999972699899998036766674078999999986498499995043000406788889999999998633354502
Q gi|254781176|r 89 IDEITEMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPFHFEGSRRMRVAESGIEALQETVDTLIVIP 168 (502)
Q Consensus 89 ~~~i~~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf~~eg~~r~~~a~~~~~~l~~~~d~~i~i~ 168 (502)
...++...+--|+|++.++=|. |--.--.++.||++|+-||+++.. .|. -+.+|...+|-.|.+|
T Consensus 100 ~~ql~~~~~~gDvli~iS~SGn---s~nvi~a~~~Ak~~g~~~i~ltg~----~gg--------~l~~l~~~~Di~i~vp 164 (196)
T 2yva_A 100 AKQVRALGHAGDVLLAISTRGN---SRDIVKAVEAAVTRDMTIVALTGY----DGG--------ELAGLLGPQDVEIRIP 164 (196)
T ss_dssp HHHHHHHCCTTCEEEEECSSSC---CHHHHHHHHHHHHTTCEEEEEECT----TCH--------HHHTTCCTTSEEEECS
T ss_pred HHHHHHHCCCCCEEEEEECCCC---CCCHHHHHHHHHHCCCEEEEEECC----CCC--------HHHHHCCCCCEEEEEC
T ss_conf 9999973578977999848999---743999999999869989999478----884--------2776156688899948
Q ss_pred HHH
Q ss_conf 788
Q gi|254781176|r 169 NQN 171 (502)
Q Consensus 169 n~~ 171 (502)
.+.
T Consensus 165 s~~ 167 (196)
T 2yva_A 165 SHR 167 (196)
T ss_dssp CSC
T ss_pred CCC
T ss_conf 998
No 31
>2ldx_A APO-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); 2.96A {Mus musculus} SCOP: c.2.1.5 d.162.1.1
Probab=94.99 E-value=0.038 Score=33.60 Aligned_cols=101 Identities=23% Similarity=0.325 Sum_probs=62.3
Q ss_pred CCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCC-----HHHHHHCCCC----EEEEECCCCCCCCCCCCCHHHHHHH
Q ss_conf 861799996681479999999858998449998255-----7885518997----0485155425567888883899999
Q gi|254781176|r 14 KPRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTD-----AQALMMSKAK----QIIQLGSGITEGLGAGSHPEVGRAA 84 (502)
Q Consensus 14 ~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd-----~~~l~~~~~~----~~~~~g~~~~~g~g~g~~~~~g~~~ 84 (502)
+.||.|||.|+-|......+...++- -+++.++.+ ..+++.+.+. ....++ +++.
T Consensus 19 ~~KI~IiGaG~VG~~~a~~l~~~~~~-~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~~~~---------~~~~------ 82 (331)
T 2ldx_A 19 RCKITVVGVGDVGMACAISILLKGLA-DELALVDADTDKLRGEALDLQHGSLFLSTPKIVF---------GKDY------ 82 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTSC-SEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEE---------ESSG------
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCC-CEEEEECCCCCHHHHHHHHHHCCCCCCCCCEEEE---------CCCH------
T ss_conf 98399989798999999999846998-8799974899757889999876654469971881---------7987------
Q ss_pred HHHHHHHHHHHHCCCCEEEEEECCCCCCCC---CH----HHHHHHHHHHC-----CCEEEEEEECCCC
Q ss_conf 997299999972699899998036766674---07----89999999864-----9849999504300
Q gi|254781176|r 85 AEECIDEITEMLDKTHMCFVTAGMGGGTGT---GA----APIIAKIARNK-----GVLTVGVVTKPFH 140 (502)
Q Consensus 85 a~~~~~~i~~~~~~~~~~~~~ag~gggtgt---g~----~p~ia~~a~~~-----~~~~~~~v~~pf~ 140 (502)
+.++++|+|+|+||.--..|. .- +.++.++++.. +. .|.||+-|-+
T Consensus 83 ---------~~~~~aDivvi~ag~pr~pg~~R~dll~~N~~I~~~~~~~i~~~~p~~-~vivvsNPvd 140 (331)
T 2ldx_A 83 ---------NVSANSKLVIITAGARMVSGQTRLDLLQRNVAIMKAIVPGVIQNSPDC-KIIVVTNPVD 140 (331)
T ss_dssp ---------GGGTTEEEEEECCSCCCCTTTCSSCTTHHHHHHHHHHTTTHHHHSTTC-EEEECSSSHH
T ss_pred ---------HHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCE-EEEECCCCCH
T ss_conf ---------882899899973788889999877888765899999999863359843-9996278502
No 32
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=94.93 E-value=0.21 Score=28.10 Aligned_cols=99 Identities=14% Similarity=0.244 Sum_probs=64.4
Q ss_pred CCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCH-----HHHHHCC------CCEEEEECCCCCCCCCCCCCHHHHH
Q ss_conf 8617999966814799999998589984499982557-----8855189------9704851554255678888838999
Q gi|254781176|r 14 KPRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDA-----QALMMSK------AKQIIQLGSGITEGLGAGSHPEVGR 82 (502)
Q Consensus 14 ~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~-----~~l~~~~------~~~~~~~g~~~~~g~g~g~~~~~g~ 82 (502)
++||.|||.|.-|......+...++- -+++.++.+. ++|+.+. ...++.- ++.
T Consensus 6 ~~KV~IiGaG~VG~~~a~~l~~~~l~-~el~L~Di~~~~a~g~a~DL~~~~~~~~~~~~i~~-----------~~~---- 69 (317)
T 3d0o_A 6 GNKVVLIGNGAVGSSYAFSLVNQSIV-DELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKA-----------GEY---- 69 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSC-SEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEE-----------CCG----
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCC-CEEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEEC-----------CCH----
T ss_conf 98099989788999999999707998-86999917897543488988612514799769936-----------978----
Q ss_pred HHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC-------CHHHHHHHHHHHC-----CCEEEEEEECCCC
Q ss_conf 99997299999972699899998036766674-------0789999999864-----9849999504300
Q gi|254781176|r 83 AAAEECIDEITEMLDKTHMCFVTAGMGGGTGT-------GAAPIIAKIARNK-----GVLTVGVVTKPFH 140 (502)
Q Consensus 83 ~~a~~~~~~i~~~~~~~~~~~~~ag~gggtgt-------g~~p~ia~~a~~~-----~~~~~~~v~~pf~ 140 (502)
+.+.++|+|+||||..-..|. .-++++.++++.. ..+ +.|||-|-+
T Consensus 70 -----------~~~~daDvvvitaG~~rk~g~~R~dll~~N~~i~~~i~~~i~~~~p~~i-vivvsNPvd 127 (317)
T 3d0o_A 70 -----------SDCHDADLVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMASKFDGI-FLVATNPVD 127 (317)
T ss_dssp -----------GGGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSE-EEECSSSHH
T ss_pred -----------HHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEE-EEEECCCCH
T ss_conf -----------9957998999836888998988467777679999999988642489728-999358841
No 33
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenase; HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=94.77 E-value=0.059 Score=32.19 Aligned_cols=98 Identities=14% Similarity=0.294 Sum_probs=62.4
Q ss_pred CEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCH-----HHHHHC------CCCEEEEECCCCCCCCCCCCCHHHHHH
Q ss_conf 617999966814799999998589984499982557-----885518------997048515542556788888389999
Q gi|254781176|r 15 PRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDA-----QALMMS------KAKQIIQLGSGITEGLGAGSHPEVGRA 83 (502)
Q Consensus 15 ~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~-----~~l~~~------~~~~~~~~g~~~~~g~g~g~~~~~g~~ 83 (502)
-||.|||.|.-|..+...+...++-+ +++.++.+. ++|+.+ ..+.++.- +++
T Consensus 2 rKI~IiGaG~VG~~~a~~l~~~~~~~-el~LiDi~~~~~~g~a~Dl~~~~~~~~~~~~i~~-----------~~~----- 64 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVAD-DYVFIDANEAKVKADQIDFQDAMANLEAHGNIVI-----------NDW----- 64 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCS-EEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEE-----------SCG-----
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCC-EEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEC-----------CCH-----
T ss_conf 88999896989999999998469999-7999858997258899998756755789847942-----------877-----
Q ss_pred HHHHHHHHHHHHHCCCCEEEEEECCCC----CCC---C----CHHHHHHHHHHHC-----CCEEEEEEECCCC
Q ss_conf 999729999997269989999803676----667---4----0789999999864-----9849999504300
Q gi|254781176|r 84 AAEECIDEITEMLDKTHMCFVTAGMGG----GTG---T----GAAPIIAKIARNK-----GVLTVGVVTKPFH 140 (502)
Q Consensus 84 ~a~~~~~~i~~~~~~~~~~~~~ag~gg----gtg---t----g~~p~ia~~a~~~-----~~~~~~~v~~pf~ 140 (502)
+.+.|+|+|+||||.-. ..| . .-++++..+++.+ .+ .+-|||=|-+
T Consensus 65 ----------~~~~daDivvitag~pr~~~~kpg~~R~dll~~N~~I~~~i~~~i~~~~p~~-ivivvsNPvd 126 (309)
T 1hyh_A 65 ----------AALADADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHG-VLVVISNPVD 126 (309)
T ss_dssp ----------GGGTTCSEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCS-EEEECSSSHH
T ss_pred ----------HHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCE-EEEECCCCCH
T ss_conf ----------8856886689961013334579984289998766778899999875049832-9998178507
No 34
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=94.71 E-value=0.098 Score=30.54 Aligned_cols=105 Identities=17% Similarity=0.231 Sum_probs=64.8
Q ss_pred CCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCC-----HHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 861799996681479999999858998449998255-----788551899704851554255678888838999999972
Q gi|254781176|r 14 KPRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTD-----AQALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAEEC 88 (502)
Q Consensus 14 ~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd-----~~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~ 88 (502)
++||.|||.|.-|......+...++.+ +++.++.+ .++++.+.+-- .++.. +.. .++.
T Consensus 7 ~~KV~IiGaG~VG~~~a~~l~~~~~~~-el~L~Di~~~~~~g~a~DL~~~~~--~~~~~--~~~--~~~~---------- 69 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTAN-ELVLIDVFKEKAIGEAMDINHGLP--FMGQM--SLY--AGDY---------- 69 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSS-EEEEECCC---CCHHHHHHTTSCC--CTTCE--EEC----CG----------
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCC-EEEEEECCCCHHHHHHHHHHCCCC--CCCCC--EEC--CCCH----------
T ss_conf 993899897989999999998279998-699990789707999999866575--68985--430--4887----------
Q ss_pred HHHHHHHHCCCCEEEEEECCCCCCCCC-------HHHHHHHHHHHC----CCEEEEEEECCCC
Q ss_conf 999999726998999980367666740-------789999999864----9849999504300
Q gi|254781176|r 89 IDEITEMLDKTHMCFVTAGMGGGTGTG-------AAPIIAKIARNK----GVLTVGVVTKPFH 140 (502)
Q Consensus 89 ~~~i~~~~~~~~~~~~~ag~gggtgtg-------~~p~ia~~a~~~----~~~~~~~v~~pf~ 140 (502)
+.|.|+|+|+||||..-..|.- -++++.++++.. ---.+.|||-|-+
T Consensus 70 -----~~~~~advvvitag~~rk~g~~R~dll~~Na~I~~~~~~~i~~~~p~~iv~vvsNPvd 127 (318)
T 1y6j_A 70 -----SDVKDCDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVSNPVD 127 (318)
T ss_dssp -----GGGTTCSEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECSSSHH
T ss_pred -----HHHCCCCEEEECCCCCCCCCCCHHHHHHHCHHHHHHHHHHHHHCCCCCEEEEECCCCH
T ss_conf -----8847888899728988999998778876566899999877642367728998079607
No 35
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus aureus subsp}
Probab=94.65 E-value=0.24 Score=27.60 Aligned_cols=100 Identities=12% Similarity=0.108 Sum_probs=60.3
Q ss_pred EEEEEEE-CCCHHHHHHHHHHCCCCCCEEEEECCCH-HHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 1799996-6814799999998589984499982557-8855189970485155425567888883899999997299999
Q gi|254781176|r 16 RITVFGV-GGGGGNAVNNMVSSGLQGVNFVVANTDA-QALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAEECIDEIT 93 (502)
Q Consensus 16 ~i~v~g~-gg~g~n~~~~~~~~~~~~~~~~~~ntd~-~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~~~~i~ 93 (502)
||.|.|- |.-|...+..+...+...|-.+.-|.+. +.|. ....++..| | ..+.+.+.
T Consensus 2 kIlVtGatG~iG~~l~~~Ll~~g~~~v~~~~R~~~~~~~~~--~~~v~~~~~-----------D--------~~d~~~l~ 60 (289)
T 3e48_A 2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDW--RGKVSVRQL-----------D--------YFNQESMV 60 (289)
T ss_dssp CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGG--BTTBEEEEC-----------C--------TTCHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCCEEEEEECCHHHCHHHH--CCCCEEEEE-----------E--------CCCHHHHH
T ss_conf 49998988789999999999689987999978946661341--499779997-----------3--------67867655
Q ss_pred HHHCCCCEEEEEECCCCCCCC--CHHHHHHHHHHHCCCEEEEEEE
Q ss_conf 972699899998036766674--0789999999864984999950
Q gi|254781176|r 94 EMLDKTHMCFVTAGMGGGTGT--GAAPIIAKIARNKGVLTVGVVT 136 (502)
Q Consensus 94 ~~~~~~~~~~~~ag~gggtgt--g~~p~ia~~a~~~~~~~~~~v~ 136 (502)
++|+|.|-||.+++...+... ....-+.+.|++.|+-.+.+.+
T Consensus 61 ~al~g~d~V~~~~~~~~~~~~~~~~~~~v~~aa~~~gv~~~v~~S 105 (289)
T 3e48_A 61 EAFKGMDTVVFIPSIIHPSFKRIPEVENLVYAAKQSGVAHIIFIG 105 (289)
T ss_dssp HHTTTCSEEEECCCCCCSHHHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred HHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEE
T ss_conf 543389889995178774056666789999999866775799973
No 36
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=94.64 E-value=0.057 Score=32.30 Aligned_cols=35 Identities=20% Similarity=0.553 Sum_probs=27.8
Q ss_pred CCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCH
Q ss_conf 8617999966814799999998589984499982557
Q gi|254781176|r 14 KPRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDA 50 (502)
Q Consensus 14 ~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~ 50 (502)
+-||.|+|+||-|+.++..+...|+.. +..++.|.
T Consensus 36 ~s~VliiG~gglG~ei~knL~l~Gv~~--i~i~D~d~ 70 (346)
T 1y8q_A 36 ASRVLLVGLKGLGAEIAKNLILAGVKG--LTMLDHEQ 70 (346)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSE--EEEECCCB
T ss_pred CCCEEEECCCHHHHHHHHHHHHHCCCE--EEEEECCC
T ss_conf 697999876889999999999957978--99993999
No 37
>1up7_A 6-phospho-beta-glucosidase; hydrolase, family4 hydrolase, NAD dependent; HET: G6P NAD; 2.4A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 PDB: 1up6_A* 1up4_A
Probab=94.44 E-value=0.24 Score=27.66 Aligned_cols=139 Identities=16% Similarity=0.102 Sum_probs=77.5
Q ss_pred CCEEEEEEECCCH--HHHHHHHHHC-CCCCCEEEEECCCHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 8617999966814--7999999985-899844999825578855189970485155425567888883899999997299
Q gi|254781176|r 14 KPRITVFGVGGGG--GNAVNNMVSS-GLQGVNFVVANTDAQALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAEECID 90 (502)
Q Consensus 14 ~~~i~v~g~gg~g--~n~~~~~~~~-~~~~~~~~~~ntd~~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~~~ 90 (502)
+.||.+||-|..+ +.+..-+... .+.+-+++-++.|...|....--.+-+++ .++.+ +...
T Consensus 2 ~mKI~iIGaGS~~~~~~~~~~~~~~~~l~~~ei~L~DId~~rl~~~~~l~~~~~~----------~~~~v------~~t~ 65 (417)
T 1up7_A 2 HMRIAVIGGGSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVK----------DRFKV------LISD 65 (417)
T ss_dssp CCEEEEETTTCTTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHT----------TSSEE------EECS
T ss_pred CCEEEEECCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHC----------CCCEE------EEEC
T ss_conf 9789998978889999999998261006899899985998999999999986640----------69729------9977
Q ss_pred HHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99997269989999803676667407899999998649849999504300040678888999999999863335450278
Q gi|254781176|r 91 EITEMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPFHFEGSRRMRVAESGIEALQETVDTLIVIPNQ 170 (502)
Q Consensus 91 ~i~~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf~~eg~~r~~~a~~~~~~l~~~~d~~i~i~n~ 170 (502)
..+++|+|+|.|++|+|-||--|. -.--++.++.|++- +. ..|..-.-.|..-+.-+.+.++.+=.-||=
T Consensus 66 d~~~al~gAD~Vv~t~~vg~~~~~---~~d~~i~~~~gi~~-~~------t~g~gG~~~alRtiPv~~~i~~~i~~~P~A 135 (417)
T 1up7_A 66 TFEGAVVDAKYVIFQFRPGGLKGR---ENDEGIPLKYGLIG-QE------TTGVGGFSAALRAFPIVEEYVDTVRKTSNA 135 (417)
T ss_dssp SHHHHHTTCSEEEECCCTTHHHHH---HHHHHGGGGGTCCC-CS------SSTHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CHHHHHCCCCEEEEEECCCCCCCH---HHHHHHHHHCCEEE-EE------CCCCHHHHHHHHHHHHHHHHHHHHHHCCCE
T ss_conf 889984799999994235899845---48864076478544-32------345108999875158999999998659981
Q ss_pred HHHHHCCC
Q ss_conf 88741366
Q gi|254781176|r 171 NLFRIAND 178 (502)
Q Consensus 171 ~l~~~~~~ 178 (502)
.++.+.+|
T Consensus 136 ~lin~tNP 143 (417)
T 1up7_A 136 TIVNFTNP 143 (417)
T ss_dssp EEEECSSS
T ss_pred EEEEECCH
T ss_conf 99992591
No 38
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=94.43 E-value=0.27 Score=27.25 Aligned_cols=99 Identities=22% Similarity=0.297 Sum_probs=64.3
Q ss_pred EEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCH-----HHHHHC------CCCEEEEECCCCCCCCCCCCCHHHHHHH
Q ss_conf 17999966814799999998589984499982557-----885518------9970485155425567888883899999
Q gi|254781176|r 16 RITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDA-----QALMMS------KAKQIIQLGSGITEGLGAGSHPEVGRAA 84 (502)
Q Consensus 16 ~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~-----~~l~~~------~~~~~~~~g~~~~~g~g~g~~~~~g~~~ 84 (502)
||.|||.|+-|......+...++- -|+..++.+. ++++.+ ....++. + +++++
T Consensus 2 KV~IiGaG~VG~~~A~~l~~~~~~-~el~L~Di~~~~a~g~a~DL~h~~~~~~~~~~v~-~---------~~~~~----- 65 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLNLDV-DEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIV-G---------GADYS----- 65 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCC-SEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEE-E---------ESCGG-----
T ss_pred EEEEECCCHHHHHHHHHHHHCCCC-CEEEEEECCCCCCHHHHHHHHCCCCCCCCCCEEE-C---------CCCHH-----
T ss_conf 799999698899999999847998-8799993889822889999866365589987465-3---------78978-----
Q ss_pred HHHHHHHHHHHHCCCCEEEEEECCCCCCCCCH-------HHHHHHHHHHCC----CEEEEEEECCCC
Q ss_conf 99729999997269989999803676667407-------899999998649----849999504300
Q gi|254781176|r 85 AEECIDEITEMLDKTHMCFVTAGMGGGTGTGA-------APIIAKIARNKG----VLTVGVVTKPFH 140 (502)
Q Consensus 85 a~~~~~~i~~~~~~~~~~~~~ag~gggtgtg~-------~p~ia~~a~~~~----~~~~~~v~~pf~ 140 (502)
.++++|+|+||||.--..|.-- +.++.++++... --.+.+||-|-+
T Consensus 66 ----------~~~~advvvitag~~~~~g~~R~dll~~N~~i~~~~~~~i~~~~p~~ivivvsNPvd 122 (294)
T 1oju_A 66 ----------LLKGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNPMD 122 (294)
T ss_dssp ----------GGTTCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSSSHH
T ss_pred ----------HCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCC
T ss_conf ----------928887899941478899987466654557999999999984199809995278631
No 39
>1tk9_A Phosphoheptose isomerase 1; lipopolysaccharide biosynthesis, structural genomics, NYSGXRC, LPC1_camje, PSI, protein structure initiative; 2.10A {Campylobacter jejuni} SCOP: c.80.1.3
Probab=94.26 E-value=0.3 Score=26.99 Aligned_cols=118 Identities=17% Similarity=0.222 Sum_probs=65.6
Q ss_pred CCEEEEEEECCCHHHHHHHHHHC----C--CCCCEEEEECCCHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 86179999668147999999985----8--99844999825578855189970485155425567888883899999997
Q gi|254781176|r 14 KPRITVFGVGGGGGNAVNNMVSS----G--LQGVNFVVANTDAQALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAEE 87 (502)
Q Consensus 14 ~~~i~v~g~gg~g~n~~~~~~~~----~--~~~~~~~~~ntd~~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~ 87 (502)
.-||.++|.||.+..+.-.-.+. + -.....+.+..|...+.....+. | . .+-
T Consensus 42 ~~kI~~~GnGgSa~~A~h~a~~~~~~~~~~~~~~~~i~l~~~~~~~ta~~nd~----~-----------~-------~~~ 99 (188)
T 1tk9_A 42 GGKILICGNGGSAADAQHFAAELSGRYKKERKALAGIALTTDTSALSAIGNDY----G-----------F-------EFV 99 (188)
T ss_dssp TCCEEEEESTHHHHHHHHHHHHHHSCSSSCCCCCCEEESSCCHHHHHHHHHHT----C-----------G-------GGH
T ss_pred CCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----C-----------H-------HHH
T ss_conf 99899996873188899999984588645653222214678732223312458----9-----------8-------999
Q ss_pred HHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 29999997269989999803676667407899999998649849999504300040678888999999999863335450
Q gi|254781176|r 88 CIDEITEMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPFHFEGSRRMRVAESGIEALQETVDTLIVI 167 (502)
Q Consensus 88 ~~~~i~~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf~~eg~~r~~~a~~~~~~l~~~~d~~i~i 167 (502)
...+++...+.-|+++...+=|. |-----.++.||++|+.|+++...+ .| .|.+.+|-.|.|
T Consensus 100 f~~ql~~~~~~gDvlI~iS~SG~---s~nii~a~~~Ak~~g~~~i~ltg~~---~~------------~l~~~~D~~i~v 161 (188)
T 1tk9_A 100 FSRQVEALGNEKDVLIGISTSGK---SPNVLEALKKAKELNMLCLGLSGKG---GG------------MMNKLCDHNLVV 161 (188)
T ss_dssp HHHHHHHHCCTTCEEEEECSSSC---CHHHHHHHHHHHHTTCEEEEEEEGG---GT------------THHHHCSEEEEE
T ss_pred HHHHHHHHCCCCCEEEEEECCCC---CCCHHHHHHHHHHCCCEEEEEECCC---CH------------HHHHHCCEEEEE
T ss_conf 99999983789998999828999---9557789999998799899995789---52------------679868988997
Q ss_pred HHHH
Q ss_conf 2788
Q gi|254781176|r 168 PNQN 171 (502)
Q Consensus 168 ~n~~ 171 (502)
|-+.
T Consensus 162 ps~~ 165 (188)
T 1tk9_A 162 PSDD 165 (188)
T ss_dssp SCSC
T ss_pred CCCC
T ss_conf 9998
No 40
>2v7p_A L-lactate dehydrogenase; oxidoreductase, phosphorylation, NAD, cytoplasm, glycolysis, thermophIle; HET: NAD; 2.10A {Thermus thermophilus} PDB: 2e37_A* 2v6m_A*
Probab=94.25 E-value=0.3 Score=26.99 Aligned_cols=102 Identities=17% Similarity=0.220 Sum_probs=63.1
Q ss_pred EEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCH-----HHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 17999966814799999998589984499982557-----8855189970485155425567888883899999997299
Q gi|254781176|r 16 RITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDA-----QALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAEECID 90 (502)
Q Consensus 16 ~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~-----~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~~~ 90 (502)
||.|||.|+-|......+...++- -|+..++.+. .+++.+.+.. ...... .. .++.
T Consensus 2 KV~IiGaG~VG~~la~~l~~~~~~-~el~L~Di~~~~~~g~a~Dl~~~~~--~~~~~~---i~-~~~~------------ 62 (310)
T 2v7p_A 2 KVGIVGSGMVGSATAYALALLGVA-REVVLVDLDRKLAQAHAEDILHATP--FAHPVW---VR-AGSY------------ 62 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCC-SEEEEECSSHHHHHHHHHHHHTTGG--GSCCCE---EE-EECG------------
T ss_pred EEEEECCCHHHHHHHHHHHHCCCC-CEEEEEECCCCCCCEEEHHHHCCCC--CCCCEE---EE-CCCH------------
T ss_conf 799999698999999999846998-8799993889856452276554262--478737---83-4987------------
Q ss_pred HHHHHHCCCCEEEEEECCCCCCCC-------CHHHHHHHHHHHC-----CCEEEEEEECCCC
Q ss_conf 999972699899998036766674-------0789999999864-----9849999504300
Q gi|254781176|r 91 EITEMLDKTHMCFVTAGMGGGTGT-------GAAPIIAKIARNK-----GVLTVGVVTKPFH 140 (502)
Q Consensus 91 ~i~~~~~~~~~~~~~ag~gggtgt-------g~~p~ia~~a~~~-----~~~~~~~v~~pf~ 140 (502)
+.|+++|+|+||||.--..|- .-++++.++++.+ .+ .|.|||-|-+
T Consensus 63 ---~~l~~adivvitag~~~kpg~~R~dl~~~Na~I~~~i~~~i~~~~p~~-ivivvsNPvd 120 (310)
T 2v7p_A 63 ---GDLEGARAVVLAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEAAPEA-VLLVATNPVD 120 (310)
T ss_dssp ---GGGTTCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTC-EEEECSSSHH
T ss_pred ---HHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCE-EEEEECCCCC
T ss_conf ---895568889984688899998878888865899999999873259973-9999268743
No 41
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=94.23 E-value=0.12 Score=30.02 Aligned_cols=108 Identities=17% Similarity=0.216 Sum_probs=60.3
Q ss_pred CC-EEEEEEE-CCCHHHHHHHHHHCCCCC----CEEEEECCC-------HHHHHHCCCCEEEEECCCCCCCCCCCCCHHH
Q ss_conf 86-1799996-681479999999858998----449998255-------7885518997048515542556788888389
Q gi|254781176|r 14 KP-RITVFGV-GGGGGNAVNNMVSSGLQG----VNFVVANTD-------AQALMMSKAKQIIQLGSGITEGLGAGSHPEV 80 (502)
Q Consensus 14 ~~-~i~v~g~-gg~g~n~~~~~~~~~~~~----~~~~~~ntd-------~~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~ 80 (502)
+| ||.|||. |.-|.++...+...++.+ +.+..++.+ .++++.+.+.....-....+
T Consensus 3 ~p~KV~IiGaaG~vG~~la~~l~~~~l~~~~~~~~l~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~~~~----------- 71 (327)
T 1y7t_A 3 APVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEAT----------- 71 (327)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEE-----------
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCHHHCHHHCCCCCCCCEEEC-----------
T ss_conf 998899988982889999999984143279973699998673752346141318634776555660315-----------
Q ss_pred HHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCH-------HHHHHHHHHHC----C-CEEEEEEECCCCC
Q ss_conf 999999729999997269989999803676667407-------89999999864----9-8499995043000
Q gi|254781176|r 81 GRAAAEECIDEITEMLDKTHMCFVTAGMGGGTGTGA-------APIIAKIARNK----G-VLTVGVVTKPFHF 141 (502)
Q Consensus 81 g~~~a~~~~~~i~~~~~~~~~~~~~ag~gggtgtg~-------~p~ia~~a~~~----~-~~~~~~v~~pf~~ 141 (502)
....+.+.++|+|+|+||.--..|--- +.++.++++.. . -..|-+||-|-..
T Consensus 72 ---------~~~~~~~~~adiVvi~ag~~~~~g~~r~dll~~N~~i~~~i~~~i~~~a~~~~~vivvtNPvd~ 135 (327)
T 1y7t_A 72 ---------DDPKVAFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANT 135 (327)
T ss_dssp ---------SCHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHH
T ss_pred ---------CCCHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCH
T ss_conf ---------7727886578859996277789998989999860288899988653034666499982697238
No 42
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=94.23 E-value=0.15 Score=29.17 Aligned_cols=101 Identities=12% Similarity=0.174 Sum_probs=61.1
Q ss_pred CCCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCH---HHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 38617999966814799999998589984499982557---885518997048515542556788888389999999729
Q gi|254781176|r 13 LKPRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDA---QALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAEECI 89 (502)
Q Consensus 13 ~~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~---~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~~ 89 (502)
.+.||.|||+||-|+.+...+...|+. .+..++-|. .+|.+.-....=.+|+ |.+ .+|.+..
T Consensus 117 ~~~~VlviG~GglGs~va~~La~~Gvg--~i~lvD~D~Ve~sNLnRQ~l~~~~diG~-----------~K~--~~a~~~l 181 (353)
T 3h5n_A 117 KNAKVVILGCGGIGNHVSVILATSGIG--EIILIDNDQIENTNLTRQVLFSEDDVGK-----------NKT--EVIKREL 181 (353)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHHTCS--EEEEEECCBCCGGGGGTCTTCCGGGTTS-----------BHH--HHHHHHH
T ss_pred HCCCEEEECCCHHHHHHHHHHHHHCCC--EEEEEECCEECHHHHCCCCCCCHHHHCC-----------CHH--HHHHHHH
T ss_conf 569799987688999999999982697--6999979991576857202359668397-----------199--9999999
Q ss_pred HHH------------------HHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEE
Q ss_conf 999------------------9972699899998036766674078999999986498499
Q gi|254781176|r 90 DEI------------------TEMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTV 132 (502)
Q Consensus 90 ~~i------------------~~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~ 132 (502)
.++ .+.+.+.|+|++.+.. ...+-..|.++|++.++-.|
T Consensus 182 ~~~np~v~I~~~~~~i~~~~~~~~~~~~D~vi~~~d~----~~~~r~~in~~c~~~~iP~I 238 (353)
T 3h5n_A 182 LKRNSEISVSEIALNINDYTDLHKVPEADIWVVSADH----PFNLINWVNKYCVRANQPYI 238 (353)
T ss_dssp HHHCTTSEEEEEECCCCSGGGGGGSCCCSEEEECCCC----STTHHHHHHHHHHHTTCCEE
T ss_pred HHHCCCCCEEEEHHHCCCHHHHHHHHHHHHHHHCCCH----HHHHHHHHHHHHHCCCCCEE
T ss_conf 9758987245311103633256553333343113550----77777779999860699889
No 43
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber dsm 13855}
Probab=94.20 E-value=0.013 Score=36.99 Aligned_cols=98 Identities=20% Similarity=0.393 Sum_probs=63.7
Q ss_pred EEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCC-----HHHHHHCC------CCEEEEECCCCCCCCCCCCCHHHHHHH
Q ss_conf 1799996681479999999858998449998255-----78855189------970485155425567888883899999
Q gi|254781176|r 16 RITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTD-----AQALMMSK------AKQIIQLGSGITEGLGAGSHPEVGRAA 84 (502)
Q Consensus 16 ~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd-----~~~l~~~~------~~~~~~~g~~~~~g~g~g~~~~~g~~~ 84 (502)
||.|||.|+-|......+...++. -|++.++.+ .++++.+. ...++. +. +
T Consensus 2 KV~IiGaG~VG~~~a~~l~~~~~~-~el~L~Di~~~~a~g~a~DL~~~~~~~~~~~~v~-~~---------~-------- 62 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQDVA-KEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVT-GT---------N-------- 62 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCS-SEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEE-EE---------S--------
T ss_pred EEEEECCCHHHHHHHHHHHHCCCC-CEEEEECCCCCCCCCHHHHHHCCCCCCCCCCEEE-EC---------C--------
T ss_conf 799999698999999999837999-8699976899823009988667365478887798-55---------7--------
Q ss_pred HHHHHHHHHHHHCCCCEEEEEECCCCCCC-------CCHHHHHHHHHHHC-----CCEEEEEEECCCC
Q ss_conf 99729999997269989999803676667-------40789999999864-----9849999504300
Q gi|254781176|r 85 AEECIDEITEMLDKTHMCFVTAGMGGGTG-------TGAAPIIAKIARNK-----GVLTVGVVTKPFH 140 (502)
Q Consensus 85 a~~~~~~i~~~~~~~~~~~~~ag~gggtg-------tg~~p~ia~~a~~~-----~~~~~~~v~~pf~ 140 (502)
..+.++++|+|+|+||.--..| ..-++++.++++.+ .. ++.|||=|-+
T Consensus 63 -------~~~~~~~aDivvi~ag~~r~~g~~R~dll~~N~~i~~~i~~~i~~~~p~~-i~ivvsNPvd 122 (314)
T 3nep_X 63 -------DYGPTEDSDVCIITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEGSPDS-TIIVVANPLD 122 (314)
T ss_dssp -------SSGGGTTCSEEEECCCC-------CHHHHHHHHHHHHHHHHHHHTTCTTC-EEEECCSSHH
T ss_pred -------CCHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC-EEEECCCCCH
T ss_conf -------50001586357531567889898989999987768789998774049984-6996378613
No 44
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Porphyromonas gingivalis atcc 33277}
Probab=94.13 E-value=0.16 Score=29.01 Aligned_cols=75 Identities=21% Similarity=0.256 Sum_probs=47.2
Q ss_pred CCEEEEEE-ECCCHHHHHHHHHHCCCCCCEEEEECCCHH-----H--HHHCCCC-EEEEECCCCCCCCCCCCCHHHHHHH
Q ss_conf 86179999-668147999999985899844999825578-----8--5518997-0485155425567888883899999
Q gi|254781176|r 14 KPRITVFG-VGGGGGNAVNNMVSSGLQGVNFVVANTDAQ-----A--LMMSKAK-QIIQLGSGITEGLGAGSHPEVGRAA 84 (502)
Q Consensus 14 ~~~i~v~g-~gg~g~n~~~~~~~~~~~~~~~~~~ntd~~-----~--l~~~~~~-~~~~~g~~~~~g~g~g~~~~~g~~~ 84 (502)
+.||.||| .|.-|..+...+...++. -+++.++.+.. + |..+..+ ..+.+ + .+
T Consensus 8 ~~KV~IiGaaG~VG~~~a~~l~~~~l~-~el~L~D~~~~~~~G~a~DL~~~~~~~~~~~~----~------~~------- 69 (343)
T 3fi9_A 8 EEKLTIVGAAGMIGSNMAQTAAMMRLT-PNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTF----T------SD------- 69 (343)
T ss_dssp SSEEEEETTTSHHHHHHHHHHHHTTCC-SCEEEECSCHHHHHHHHHHHHHHCCTTCCCEE----E------SC-------
T ss_pred CCCEEEECCCCHHHHHHHHHHHHCCCC-CEEEEECCCCCCCCHHHHHHHHCCCCCCCEEE----E------CC-------
T ss_conf 982899968867999999999837998-87999788777542223764533867887076----0------88-------
Q ss_pred HHHHHHHHHHHHCCCCEEEEEECCCCCCC
Q ss_conf 99729999997269989999803676667
Q gi|254781176|r 85 AEECIDEITEMLDKTHMCFVTAGMGGGTG 113 (502)
Q Consensus 85 a~~~~~~i~~~~~~~~~~~~~ag~gggtg 113 (502)
..+.|.|+|+|+||||.--..|
T Consensus 70 -------~~~~l~daDiVVitAG~~rkpg 91 (343)
T 3fi9_A 70 -------IKEALTDAKYIVSSGGAPRKEG 91 (343)
T ss_dssp -------HHHHHTTEEEEEECCC------
T ss_pred -------HHHHHCCCCEEEECCCCCCCCC
T ss_conf -------6898279879998688789999
No 45
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=94.11 E-value=0.21 Score=28.08 Aligned_cols=97 Identities=21% Similarity=0.270 Sum_probs=60.1
Q ss_pred EEEEEE-ECCCHHHHHHHHHHCCCCCCEEEEECCC-------HHH--HHH---CCCCEEEEECCCCCCCCCCCCCHHHHH
Q ss_conf 179999-6681479999999858998449998255-------788--551---899704851554255678888838999
Q gi|254781176|r 16 RITVFG-VGGGGGNAVNNMVSSGLQGVNFVVANTD-------AQA--LMM---SKAKQIIQLGSGITEGLGAGSHPEVGR 82 (502)
Q Consensus 16 ~i~v~g-~gg~g~n~~~~~~~~~~~~~~~~~~ntd-------~~~--l~~---~~~~~~~~~g~~~~~g~g~g~~~~~g~ 82 (502)
||.||| .|+-|..+...+...++. -+++.++.+ .++ |.. .....+|.-| +.
T Consensus 2 KV~IiGaaG~VG~~~a~~l~~~~~~-~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~-----------~~---- 65 (303)
T 1o6z_A 2 KVSVVGAAGTVGAAAGYNIALRDIA-DEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQG-----------GY---- 65 (303)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCC-SEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEEC-----------CG----
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCC-CEEEEEECCCCCCCCCEEHHHHHCCCCCCCCCEEECC-----------CH----
T ss_conf 4999979984999999999827998-8799982678656431100214443655799668508-----------86----
Q ss_pred HHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCH-------HHHHHHHHHHC----CCEEEEEEECCC
Q ss_conf 9999729999997269989999803676667407-------89999999864----984999950430
Q gi|254781176|r 83 AAAEECIDEITEMLDKTHMCFVTAGMGGGTGTGA-------APIIAKIARNK----GVLTVGVVTKPF 139 (502)
Q Consensus 83 ~~a~~~~~~i~~~~~~~~~~~~~ag~gggtgtg~-------~p~ia~~a~~~----~~~~~~~v~~pf 139 (502)
+.|+++|+|+||||.--..|..- +.++.++++.+ ---.+.|||-|-
T Consensus 66 -----------~~~~~aDivvitag~~rk~g~~r~dll~~Na~I~~~~~~~i~~~~p~~~vivvsNPv 122 (303)
T 1o6z_A 66 -----------EDTAGSDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSNPV 122 (303)
T ss_dssp -----------GGGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECCSSH
T ss_pred -----------HHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCC
T ss_conf -----------884689899993677889999767887765678999999862158854999945831
No 46
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=94.01 E-value=0.28 Score=27.19 Aligned_cols=100 Identities=19% Similarity=0.357 Sum_probs=58.7
Q ss_pred EEEEEEE-CCCHHHHHHHHHHCCCCCCEEEEEC--CCH---H----HHHH----CCCCEEEEECCCCCCCCCCCCCHHHH
Q ss_conf 1799996-6814799999998589984499982--557---8----8551----89970485155425567888883899
Q gi|254781176|r 16 RITVFGV-GGGGGNAVNNMVSSGLQGVNFVVAN--TDA---Q----ALMM----SKAKQIIQLGSGITEGLGAGSHPEVG 81 (502)
Q Consensus 16 ~i~v~g~-gg~g~n~~~~~~~~~~~~~~~~~~n--td~---~----~l~~----~~~~~~~~~g~~~~~g~g~g~~~~~g 81 (502)
||.|||. |.-|......+...++-+ ++..++ -|. + .|.. .....++.++..
T Consensus 2 KV~IiGA~G~vG~~la~~l~~~~~~~-el~L~D~~~~~~~~~g~a~Dl~d~~~~~~~~~~i~~~~~-------------- 66 (313)
T 1hye_A 2 KVTIIGASGRVGSATALLLAKEPFMK-DLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESD-------------- 66 (313)
T ss_dssp EEEEETTTSHHHHHHHHHHHTCTTCC-EEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEET--------------
T ss_pred EEEEECCCCHHHHHHHHHHHCCCCCC-EEEEECCCCCHHCCHHHHHHHHHHCCCCCCCCEEEECCC--------------
T ss_conf 79999999869999999997089987-599966514400055088888865646578817994488--------------
Q ss_pred HHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCC-------HHHHHHHHHHHC----CCEEEEEEECCCC
Q ss_conf 9999972999999726998999980367666740-------789999999864----9849999504300
Q gi|254781176|r 82 RAAAEECIDEITEMLDKTHMCFVTAGMGGGTGTG-------AAPIIAKIARNK----GVLTVGVVTKPFH 140 (502)
Q Consensus 82 ~~~a~~~~~~i~~~~~~~~~~~~~ag~gggtgtg-------~~p~ia~~a~~~----~~~~~~~v~~pf~ 140 (502)
+..+.|.++|+|+|+||..-..|.- -++++.++++.+ .. .|-|||-|-.
T Consensus 67 ---------~~~~al~~advVvitag~~~~~g~~r~dll~~N~~i~~~~~~~i~~~~~~-~I~vvsnPvd 126 (313)
T 1hye_A 67 ---------ENLRIIDESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEICDT-KIFVITNPVD 126 (313)
T ss_dssp ---------TCGGGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCCC-EEEECSSSHH
T ss_pred ---------CHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC-EEEEECCCCH
T ss_conf ---------41656168878998477778999887899987267799999999754557-2898337635
No 47
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=93.99 E-value=0.093 Score=30.72 Aligned_cols=104 Identities=21% Similarity=0.332 Sum_probs=62.9
Q ss_pred CCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCC-----HHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 861799996681479999999858998449998255-----788551899704851554255678888838999999972
Q gi|254781176|r 14 KPRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTD-----AQALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAEEC 88 (502)
Q Consensus 14 ~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd-----~~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~ 88 (502)
+.||.|||.|.-|..+...+...++. -+++.++.+ .++++.+.+..... +...-..++++
T Consensus 7 ~~KV~IiGaG~VG~~~a~~l~~~~l~-~el~L~Di~~~~~~g~a~DL~~~~~~~~-----~~~~~~~~~~~--------- 71 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIA-REIVLEDIAKERVEAEVLDMQHGSSFYP-----TVSIDGSDDPE--------- 71 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCC-SEEEEECSSHHHHHHHHHHHHHTGGGST-----TCEEEEESCGG---------
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCC-CEEEEEECCCCHHHHHHHHHHCCCCCCC-----CCEEEECCCHH---------
T ss_conf 98599999798999999999817999-8799995899722789999876676689-----85475179989---------
Q ss_pred HHHHHHHHCCCCEEEEEECCCCCCCCC-------HHHHHHHHHHHCC----CEEEEEEECC
Q ss_conf 999999726998999980367666740-------7899999998649----8499995043
Q gi|254781176|r 89 IDEITEMLDKTHMCFVTAGMGGGTGTG-------AAPIIAKIARNKG----VLTVGVVTKP 138 (502)
Q Consensus 89 ~~~i~~~~~~~~~~~~~ag~gggtgtg-------~~p~ia~~a~~~~----~~~~~~v~~p 138 (502)
.+.++|+|+|+||..-..|.- -++++.++++.+. --.+.|||-|
T Consensus 72 ------~~~dadvvvi~ag~~rk~g~~R~dll~~Na~I~~~~~~~i~~~~p~~iiivvsNP 126 (319)
T 1lld_A 72 ------ICRDADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLITNP 126 (319)
T ss_dssp ------GGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSS
T ss_pred ------HHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCC
T ss_conf ------9578868999358889999987898654389999999998722998189964783
No 48
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transferase, structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=93.83 E-value=0.24 Score=27.61 Aligned_cols=101 Identities=16% Similarity=0.231 Sum_probs=58.6
Q ss_pred CCCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 38617999966814799999998589984499982557885518997048515542556788888389999999729999
Q gi|254781176|r 13 LKPRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDAQALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAEECIDEI 92 (502)
Q Consensus 13 ~~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~~~~i 92 (502)
.+.||.|||+||-||.+...|...|+. .+..++-|.-.++ .....+ .... -.| .+.+ .+|.+...+|
T Consensus 35 ~~~~VlIvG~GglGs~va~~La~~GVg--~i~lvD~D~Ve~s--NL~Rq~-~~~~---diG---~~Ka--~~a~~~L~~i 101 (292)
T 3h8v_A 35 RTFAVAIVGVGGVGSVTAEMLTRCGIG--KLLLFDYDKVELA--NMNRLF-FQPH---QAG---LSKV--QAAEHTLRNI 101 (292)
T ss_dssp GGCEEEEECCSHHHHHHHHHHHHHTCS--EEEEECCCBC---------------C---CTT---SBHH--HHHHHHHHHH
T ss_pred HCCCEEEECCCHHHHHHHHHHHHCCCC--EEEEEECCCCCHH--HCCCCC-CCHH---HHC---CHHH--HHHHHHHHCC
T ss_conf 369789988688999999999981898--5999839992231--105350-3554---607---3568--9999997424
Q ss_pred -------------------HH-----------HHCCCCEEEEEECCCCCCCCCH-HHHHHHHHHHCCCEEE
Q ss_conf -------------------99-----------7269989999803676667407-8999999986498499
Q gi|254781176|r 93 -------------------TE-----------MLDKTHMCFVTAGMGGGTGTGA-APIIAKIARNKGVLTV 132 (502)
Q Consensus 93 -------------------~~-----------~~~~~~~~~~~ag~gggtgtg~-~p~ia~~a~~~~~~~~ 132 (502)
.. .+.+.|+||.+. .+-. --.|.+++.+.++..|
T Consensus 102 Np~v~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~DlVid~~------Dn~~~r~~in~~c~~~~ip~I 166 (292)
T 3h8v_A 102 NPDVLFEVHNYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCV------DNFEARMTINTACNELGQTWM 166 (292)
T ss_dssp CTTSEEEEECCCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECC------SSHHHHHHHHHHHHHHTCCEE
T ss_pred CCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCEEEECC------CCHHHHHHHHHHHHHHCCCEE
T ss_conf 99749999963215313389998776555687614788899867------898888999999997099979
No 49
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=93.76 E-value=0.36 Score=26.34 Aligned_cols=99 Identities=12% Similarity=0.123 Sum_probs=66.8
Q ss_pred CCCHHHCCCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHCC---CCEEEEECCCCCCCCCCCCCHHHHHH
Q ss_conf 788454386179999668147999999985899844999825578855189---97048515542556788888389999
Q gi|254781176|r 7 NMDITELKPRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDAQALMMSK---AKQIIQLGSGITEGLGAGSHPEVGRA 83 (502)
Q Consensus 7 ~~~~~~~~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~~~l~~~~---~~~~~~~g~~~~~g~g~g~~~~~g~~ 83 (502)
+++-+...-||.|+|.|+.|.-++..+.+. .++++++++-+...+.... -...+++ |.
T Consensus 16 ~~~~~~m~kkIlvlGaG~vg~~~a~~L~~~--~~~~v~va~r~~~~a~~~~~~~~~~~~~~------------D~----- 76 (467)
T 2axq_A 16 HIEGRHMGKNVLLLGSGFVAQPVIDTLAAN--DDINVTVACRTLANAQALAKPSGSKAISL------------DV----- 76 (467)
T ss_dssp -------CEEEEEECCSTTHHHHHHHHHTS--TTEEEEEEESSHHHHHHHHGGGTCEEEEC------------CT-----
T ss_pred CCCHHHCCCCEEEECCCHHHHHHHHHHHHC--CCCEEEEEECCHHHHHHHHHCCCCCEEEE------------EC-----
T ss_conf 520654488289999878999999999708--99349999699999999860159846998------------47-----
Q ss_pred HHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEE
Q ss_conf 99972999999726998999980367666740789999999864984999
Q gi|254781176|r 84 AAEECIDEITEMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVG 133 (502)
Q Consensus 84 ~a~~~~~~i~~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~ 133 (502)
.+.+.+.+++.++|+|+.+. .+ -..+-||+.|-+.|+-.|-
T Consensus 77 ---~d~~~l~~~i~~~DvVI~a~--P~----~~~~~va~~ai~~g~~~vd 117 (467)
T 2axq_A 77 ---TDDSALDKVLADNDVVISLI--PY----TFHPNVVKSAIRTKTDVVT 117 (467)
T ss_dssp ---TCHHHHHHHHHTSSEEEECS--CG----GGHHHHHHHHHHHTCEEEE
T ss_pred ---CCHHHHHHHHHCCCEEEECC--CH----HHCHHHHHHHHHHCCCEEC
T ss_conf ---99999999872599999997--71----2178999999981996740
No 50
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=93.62 E-value=0.24 Score=27.68 Aligned_cols=99 Identities=19% Similarity=0.279 Sum_probs=62.0
Q ss_pred CCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCC-----HHHHHHCC-----CCEEEEECCCCCCCCCCCCCHHHHHH
Q ss_conf 861799996681479999999858998449998255-----78855189-----97048515542556788888389999
Q gi|254781176|r 14 KPRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTD-----AQALMMSK-----AKQIIQLGSGITEGLGAGSHPEVGRA 83 (502)
Q Consensus 14 ~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd-----~~~l~~~~-----~~~~~~~g~~~~~g~g~g~~~~~g~~ 83 (502)
+.||.|||.|.-|..+...+...++- -|++.++.+ .++++.+. .+.++.- ++.+
T Consensus 5 ~~KV~IiGaG~VG~~~a~~l~~~~l~-~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~-----------~~~~---- 68 (318)
T 1ez4_A 5 HQKVVLVGDGAVGSSYAFAMAQQGIA-EEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYS-----------GEYS---- 68 (318)
T ss_dssp BCEEEEECCSHHHHHHHHHHHHHTCC-SEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEE-----------CCGG----
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCC-CEEEEECCCCCCCCCHHHHHHCCCCCCCCCEEEC-----------CCHH----
T ss_conf 98799989798999999999827998-8799975899845556566651654568836724-----------9989----
Q ss_pred HHHHHHHHHHHHHCCCCEEEEEECCCCCCCC-------CHHHHHHHHHHHC-----CCEEEEEEECCCC
Q ss_conf 9997299999972699899998036766674-------0789999999864-----9849999504300
Q gi|254781176|r 84 AAEECIDEITEMLDKTHMCFVTAGMGGGTGT-------GAAPIIAKIARNK-----GVLTVGVVTKPFH 140 (502)
Q Consensus 84 ~a~~~~~~i~~~~~~~~~~~~~ag~gggtgt-------g~~p~ia~~a~~~-----~~~~~~~v~~pf~ 140 (502)
.+.++|+|+||||.--..|. .-++++-++++.+ .+ .+.|||-|-+
T Consensus 69 -----------~~~~aDivvitaG~~~k~g~~R~dll~~Na~i~~~~~~~i~~~~p~~-ivivvsNPvd 125 (318)
T 1ez4_A 69 -----------DCKDADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDG-IFLVAANPVD 125 (318)
T ss_dssp -----------GGTTCSEEEECCCC----------CHHHHHHHHHHHHHHHHHTTCCS-EEEECSSSHH
T ss_pred -----------HHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC-EEEEECCCCC
T ss_conf -----------96799899994897789999868999888999999999999625783-8999658851
No 51
>2v65_A LDH-A, L-lactate dehydrogenase A chain; oxidoreductase, NAD, FISH, cytoplasm, glycolysis, psychrophIle; 2.35A {Champsocephalus gunnari}
Probab=93.58 E-value=0.13 Score=29.73 Aligned_cols=105 Identities=18% Similarity=0.249 Sum_probs=64.5
Q ss_pred CCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCH-----HHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 8617999966814799999998589984499982557-----88551899704851554255678888838999999972
Q gi|254781176|r 14 KPRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDA-----QALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAEEC 88 (502)
Q Consensus 14 ~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~-----~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~ 88 (502)
+.||.|||.|+-|......+...++. -+++.++.+. .+++.+.+.... ...+ . ..++++
T Consensus 20 ~~KV~IiGaG~VG~~~a~~l~~~~~~-~el~L~Di~~~~~~G~a~DL~h~~~~~--~~~~---~-~~~d~~--------- 83 (331)
T 2v65_A 20 RSKVTVVGVGMVGMASAISILLKDLC-DELAMVDVMEDKLKGEVMDLQHGSLFL--KTKI---V-GDKDYS--------- 83 (331)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCC-SEEEEECSCHHHHHHHHHHHHTTGGGC--CSEE---E-ECSSGG---------
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCC-CEEEEECCCCCCCHHHHHHHHCCCCCC--CCCE---E-ECCCHH---------
T ss_conf 99799989788999999999846998-879998189980265888876166446--8807---8-479989---------
Q ss_pred HHHHHHHHCCCCEEEEEECCCCCCCCC-------HHHHHHHHHHHCC----CEEEEEEECCCC
Q ss_conf 999999726998999980367666740-------7899999998649----849999504300
Q gi|254781176|r 89 IDEITEMLDKTHMCFVTAGMGGGTGTG-------AAPIIAKIARNKG----VLTVGVVTKPFH 140 (502)
Q Consensus 89 ~~~i~~~~~~~~~~~~~ag~gggtgtg-------~~p~ia~~a~~~~----~~~~~~v~~pf~ 140 (502)
.+.++|+|+|+||....-|.- -++++.++++.+. --.+.|||=|-+
T Consensus 84 ------~~~~advvvi~ag~prkpg~~R~dLl~~Na~I~~~i~~~i~~~~p~~~vivvsNPvd 140 (331)
T 2v65_A 84 ------VTANSKVVVVTAGARQQEGESRLNLVQRNVNIFKFIIPNIVKYSPNCILMVVSNPVD 140 (331)
T ss_dssp ------GGTTCSEEEECCCC----CCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHH
T ss_pred ------HHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCH
T ss_conf ------968999999878997677888789998625668999999873199739995488605
No 52
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=93.53 E-value=0.29 Score=27.00 Aligned_cols=102 Identities=21% Similarity=0.303 Sum_probs=63.9
Q ss_pred EEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCH-----HHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 17999966814799999998589984499982557-----8855189970485155425567888883899999997299
Q gi|254781176|r 16 RITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDA-----QALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAEECID 90 (502)
Q Consensus 16 ~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~-----~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~~~ 90 (502)
||.|||.|.-|..+...+...++- -+++.++.+. ++++.+.+-. +..+..++. ++.
T Consensus 2 KI~IiGaG~VG~~~a~~l~~~~~~-~el~L~Di~~~~~~g~a~DL~~~~~-~~~~~~i~~-----~~~------------ 62 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSC-SELVLVDRDEDRAQAEAEDIAHAAP-VSHGTRVWH-----GGH------------ 62 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCC-SEEEEECSSHHHHHHHHHHHTTSCC-TTSCCEEEE-----ECG------------
T ss_pred EEEEECCCHHHHHHHHHHHHCCCC-CEEEEECCCCCCCCEEEHHHHCCCC-CCCCCEEEC-----CCH------------
T ss_conf 799999688999999999837998-8699985899833121124341074-579955714-----987------------
Q ss_pred HHHHHHCCCCEEEEEECCCCCCCC-------CHHHHHHHHHHHC-----CCEEEEEEECCCC
Q ss_conf 999972699899998036766674-------0789999999864-----9849999504300
Q gi|254781176|r 91 EITEMLDKTHMCFVTAGMGGGTGT-------GAAPIIAKIARNK-----GVLTVGVVTKPFH 140 (502)
Q Consensus 91 ~i~~~~~~~~~~~~~ag~gggtgt-------g~~p~ia~~a~~~-----~~~~~~~v~~pf~ 140 (502)
+.++++|+|+||||..-..|- .-++++.++++.+ .+ .+.|||=|-+
T Consensus 63 ---~~~~~aDivvitaG~~~k~g~tR~dll~~Na~I~~~i~~~i~~~~p~~-ivivvsNPvd 120 (304)
T 2v6b_A 63 ---SELADAQVVILTAGANQKPGESRLDLLEKNADIFRELVPQITRAAPDA-VLLVTSNPVD 120 (304)
T ss_dssp ---GGGTTCSEEEECC------------CHHHHHHHHHHHHHHHHHHCSSS-EEEECSSSHH
T ss_pred ---HHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCE-EEEEECCCHH
T ss_conf ---894688889980688889999888988746799999999987429973-9999558404
No 53
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=93.40 E-value=0.21 Score=28.09 Aligned_cols=75 Identities=11% Similarity=0.127 Sum_probs=48.1
Q ss_pred EEEEEEE-CCCHHHHHHHHHHCCCCC----CEEEEECCC---------HHH--HHHCCCC--EEEEECCCCCCCCCCCCC
Q ss_conf 1799996-681479999999858998----449998255---------788--5518997--048515542556788888
Q gi|254781176|r 16 RITVFGV-GGGGGNAVNNMVSSGLQG----VNFVVANTD---------AQA--LMMSKAK--QIIQLGSGITEGLGAGSH 77 (502)
Q Consensus 16 ~i~v~g~-gg~g~n~~~~~~~~~~~~----~~~~~~ntd---------~~~--l~~~~~~--~~~~~g~~~~~g~g~g~~ 77 (502)
||.|+|- |+-|......+....+.+ +++..++.. .++ |..+..+ ..+.++
T Consensus 7 KV~IiGA~G~vG~~la~~l~~~~l~~~~~~~~L~L~Di~~~~a~~~l~g~a~DL~~~~~~~~~~~~~~------------ 74 (329)
T 1b8p_A 7 RVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLLAGMTAH------------ 74 (329)
T ss_dssp EEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTEEEEEEE------------
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHCCCCCCEEEHHHHCCCCCCCCEEEC------------
T ss_conf 89998989789999999998376468996689999767862212300423525665576566886966------------
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC
Q ss_conf 3899999997299999972699899998036766674
Q gi|254781176|r 78 PEVGRAAAEECIDEITEMLDKTHMCFVTAGMGGGTGT 114 (502)
Q Consensus 78 ~~~g~~~a~~~~~~i~~~~~~~~~~~~~ag~gggtgt 114 (502)
....+.|.++|+|+|+||..-.-|.
T Consensus 75 ------------~~~~~~l~~advVvitag~~~~~g~ 99 (329)
T 1b8p_A 75 ------------ADPMTAFKDADVALLVGARPRGPGM 99 (329)
T ss_dssp ------------SSHHHHTTTCSEEEECCCCCCCTTC
T ss_pred ------------CCCHHHHCCCCEEEEECCCCCCCCC
T ss_conf ------------8858986678879996078889998
No 54
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=93.30 E-value=0.43 Score=25.81 Aligned_cols=106 Identities=19% Similarity=0.278 Sum_probs=62.3
Q ss_pred CCEEEEEEE-CCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHC-CCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 861799996-6814799999998589984499982557885518-99704851554255678888838999999972999
Q gi|254781176|r 14 KPRITVFGV-GGGGGNAVNNMVSSGLQGVNFVVANTDAQALMMS-KAKQIIQLGSGITEGLGAGSHPEVGRAAAEECIDE 91 (502)
Q Consensus 14 ~~~i~v~g~-gg~g~n~~~~~~~~~~~~~~~~~~ntd~~~l~~~-~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~~~~ 91 (502)
..||.|+|- |+.|..+++.+.+.|.+ |-.++=|.+. +... .-...+..| |. .+.+.
T Consensus 3 ~kkIlV~GatG~iG~~l~~~ll~~g~~-V~~~~R~~~~--~~~~~~~~~~~v~~-----------D~--------~d~~~ 60 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAVQAGYE-VTVLVRDSSR--LPSEGPRPAHVVVG-----------DV--------LQAAD 60 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCE-EEEEESCGGG--SCSSSCCCSEEEES-----------CT--------TSHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEECCHHH--CCCCCCCCCEEEEE-----------CC--------CHHHH
T ss_conf 888999999868999999999978698-9999848365--65433566158960-----------24--------33678
Q ss_pred HHHHHCCCCEEEEEECCCCCCCC-----CHHHHHHHHHHHCCCEEEEEEECCCCC
Q ss_conf 99972699899998036766674-----078999999986498499995043000
Q gi|254781176|r 92 ITEMLDKTHMCFVTAGMGGGTGT-----GAAPIIAKIARNKGVLTVGVVTKPFHF 141 (502)
Q Consensus 92 i~~~~~~~~~~~~~ag~gggtgt-----g~~p~ia~~a~~~~~~~~~~v~~pf~~ 141 (502)
+.+++++.|.||.++|-...... -.+--+.+.+++.|+--+-+++.-+.+
T Consensus 61 l~~a~~~~d~Vi~~~g~~~~~~~~~~~~~~~~~~~~a~~~~~v~r~i~~ss~~~~ 115 (206)
T 1hdo_A 61 VDKTVAGQDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLL 115 (206)
T ss_dssp HHHHHTTCSEEEECCCCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGT
T ss_pred HHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCC
T ss_conf 9999769979999713688501012458889999999998599989998666136
No 55
>1p3d_A UDP-N-acetylmuramate--alanine ligase; alpha/beta protein; HET: UMA ANP; 1.70A {Haemophilus influenzae} SCOP: c.5.1.1 c.59.1.1 c.72.2.1 PDB: 1gqq_A* 1p31_A* 1gqy_A*
Probab=93.22 E-value=0.28 Score=27.16 Aligned_cols=46 Identities=24% Similarity=0.464 Sum_probs=26.9
Q ss_pred CEEEEEEECCCHHHHHHHHH-HCCCCCCEEEEEC----CCHHHHHHCCCCEEEEEC
Q ss_conf 61799996681479999999-8589984499982----557885518997048515
Q gi|254781176|r 15 PRITVFGVGGGGGNAVNNMV-SSGLQGVNFVVAN----TDAQALMMSKAKQIIQLG 65 (502)
Q Consensus 15 ~~i~v~g~gg~g~n~~~~~~-~~~~~~~~~~~~n----td~~~l~~~~~~~~~~~g 65 (502)
-||.+||+||.|..++-++. +.|.. ....+ .-.+.|.... .++.+|
T Consensus 19 k~i~~iGiggsG~s~lA~~l~~~G~~---V~~~D~~~~~~~~~L~~~g--i~~~~g 69 (475)
T 1p3d_A 19 QQIHFIGIGGAGMSGIAEILLNEGYQ---ISGSDIADGVVTQRLAQAG--AKIYIG 69 (475)
T ss_dssp CEEEEETTTSTTHHHHHHHHHHHTCE---EEEEESCCSHHHHHHHHTT--CEEEES
T ss_pred CEEEEEEECHHHHHHHHHHHHHCCCE---EEEEECCCCHHHHHHHHCC--CEEECC
T ss_conf 77999984699999999999968894---9999089997999999787--999879
No 56
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=93.17 E-value=0.16 Score=29.04 Aligned_cols=99 Identities=16% Similarity=0.248 Sum_probs=61.7
Q ss_pred CCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCC-----HHHHHHC------CCCEEEEECCCCCCCCCCCCCHHHHH
Q ss_conf 861799996681479999999858998449998255-----7885518------99704851554255678888838999
Q gi|254781176|r 14 KPRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTD-----AQALMMS------KAKQIIQLGSGITEGLGAGSHPEVGR 82 (502)
Q Consensus 14 ~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd-----~~~l~~~------~~~~~~~~g~~~~~g~g~g~~~~~g~ 82 (502)
++||.|||.|.-|..+...+...++. +++.++.+ .++++.+ ....++.- +++
T Consensus 7 ~~KV~IiGaG~VG~~~a~~l~~~~l~--el~L~Di~~~~a~g~a~DL~~~~~~~~~~~~~~~----------~~~----- 69 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGLKELG--DVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTG----------AND----- 69 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCC--EEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEE----------ESS-----
T ss_pred CCEEEEECCCHHHHHHHHHHHCCCCC--EEEEECCCCCCCCCHHHHHHHHCCCCCCCCEEEC----------CCC-----
T ss_conf 88799989798999999999639998--8999848998550386754433536788865816----------886-----
Q ss_pred HHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCC-------HHHHHHHHHHHC-----CCEEEEEEECCCC
Q ss_conf 999972999999726998999980367666740-------789999999864-----9849999504300
Q gi|254781176|r 83 AAAEECIDEITEMLDKTHMCFVTAGMGGGTGTG-------AAPIIAKIARNK-----GVLTVGVVTKPFH 140 (502)
Q Consensus 83 ~~a~~~~~~i~~~~~~~~~~~~~ag~gggtgtg-------~~p~ia~~a~~~-----~~~~~~~v~~pf~ 140 (502)
.+.++++|+|+|+||..-..|.- -++++.++++.. .. .+.|||-|-+
T Consensus 70 ----------~~~~~~adivvitag~~~k~g~~R~dll~~N~~I~~~~~~~i~~~~p~~-ivivvsNPvd 128 (324)
T 3gvi_A 70 ----------YAAIEGADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEA-FVICITNPLD 128 (324)
T ss_dssp ----------GGGGTTCSEEEECCSCCCC-----CHHHHHHHHHHHHHHHHHHHHCTTC-EEEECCSSHH
T ss_pred ----------HHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC-EEEEECCCHH
T ss_conf ----------7885587189984367899999889999989999999999999669981-8999469717
No 57
>1vjt_A Alpha-glucosidase; TM0752, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics, hydrolase; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=93.05 E-value=0.034 Score=33.90 Aligned_cols=146 Identities=16% Similarity=0.166 Sum_probs=70.0
Q ss_pred CCEEEEEEECCCH--HHHHHHHHHCC-C--CCCEEEEECCCHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 8617999966814--79999999858-9--98449998255788551899704851554255678888838999999972
Q gi|254781176|r 14 KPRITVFGVGGGG--GNAVNNMVSSG-L--QGVNFVVANTDAQALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAEEC 88 (502)
Q Consensus 14 ~~~i~v~g~gg~g--~n~~~~~~~~~-~--~~~~~~~~ntd~~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~ 88 (502)
.-||.+||=|++. ...+..+.... + ++.+++-++.|.+.|.....-.+.++ +-+|.....+ .
T Consensus 12 ~mKI~iIGaGS~~~~~~l~~~i~~~~~L~~~~~~l~L~Did~~rL~~~~~l~~~~~-----~~~~~~~~v~--------~ 78 (483)
T 1vjt_A 12 HMKISIIGAGSVRFALQLVGDIAQTEELSREDTHIYMMDVHERRLNASYILARKYV-----EELNSPVKIV--------K 78 (483)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHSTTTCSTTEEEEEECSCHHHHHHHHHHHHHHH-----HHHTCCCEEE--------E
T ss_pred CEEEEEECCCHHHHHHHHHHHHHHCHHCCCCCCEEEEECCCHHHHHHHHHHHHHHH-----HHCCCCEEEE--------E
T ss_conf 13899999865765999999997272128887779996899899999999999999-----9619890899--------9
Q ss_pred HHHHHHHHCCCCEEEEEECCCC-CCCCCHHHHHH---HHHHHCC----CE---EEEEEECCCCCCCHHHHHHHHHHHHHH
Q ss_conf 9999997269989999803676-66740789999---9998649----84---999950430004067888899999999
Q gi|254781176|r 89 IDEITEMLDKTHMCFVTAGMGG-GTGTGAAPIIA---KIARNKG----VL---TVGVVTKPFHFEGSRRMRVAESGIEAL 157 (502)
Q Consensus 89 ~~~i~~~~~~~~~~~~~ag~gg-gtgtg~~p~ia---~~a~~~~----~~---~~~~v~~pf~~eg~~r~~~a~~~~~~l 157 (502)
--..+++|+|+|.||.+.+-++ --|.|.+-..- +|-.+-| ++ |.|..-.-+.+-.-+-+....+=.+.+
T Consensus 79 Ttdr~eAl~gADfVi~~i~~~~~Rvg~~~~r~~ded~~Ip~K~gl~~gv~gQet~G~GG~~~alRtip~ipv~leia~di 158 (483)
T 1vjt_A 79 TSSLDEAIDGADFIINTAYPYDPRYHDSGSQRWDEVTKVGEKHGYYRGIDSQELNMVSTYTYVLSSYPDMKLALEIAEKM 158 (483)
T ss_dssp ESCHHHHHTTCSEEEECCCCCCTTTCSSHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTSCSTTTCHHHHHHHHHHHHHH
T ss_pred ECCHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCEECCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 78999997699999980310556546766433331232431215002545652678765513102563029999999999
Q ss_pred HHHHHHHHHHHHHHHHHHCCC
Q ss_conf 986333545027888741366
Q gi|254781176|r 158 QETVDTLIVIPNQNLFRIAND 178 (502)
Q Consensus 158 ~~~~d~~i~i~n~~l~~~~~~ 178 (502)
+++| ||=-|+...+|
T Consensus 159 ~e~~------P~AwliNyTNP 173 (483)
T 1vjt_A 159 KKMA------PKAYLMQTANP 173 (483)
T ss_dssp HHHC------TTCEEEECSSC
T ss_pred HHHC------CCEEEEECCCH
T ss_conf 9769------98089980788
No 58
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, PSI-2, protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=92.95 E-value=0.39 Score=26.14 Aligned_cols=113 Identities=17% Similarity=0.211 Sum_probs=69.7
Q ss_pred CCCCCHHHCCCEEEEEE-ECCCHHHHHHHHHHCCCCCCEEEEECCC-HHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHH
Q ss_conf 55788454386179999-6681479999999858998449998255-788551899704851554255678888838999
Q gi|254781176|r 5 NANMDITELKPRITVFG-VGGGGGNAVNNMVSSGLQGVNFVVANTD-AQALMMSKAKQIIQLGSGITEGLGAGSHPEVGR 82 (502)
Q Consensus 5 ~~~~~~~~~~~~i~v~g-~gg~g~n~~~~~~~~~~~~~~~~~~ntd-~~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~ 82 (502)
+.|+.++.- ||.|+| -|+-|..++..+.+.|.. |-.++=|.+ .+.|....+. .+..+ |.
T Consensus 14 ~~~~~~~~M--kIlI~GasG~iG~~lv~~Ll~~g~~-V~~l~R~~~k~~~~~~~~~~-~~~~~-----------d~---- 74 (236)
T 3e8x_A 14 RENLYFQGM--RVLVVGANGKVARYLLSELKNKGHE-PVAMVRNEEQGPELRERGAS-DIVVA-----------NL---- 74 (236)
T ss_dssp -------CC--EEEEETTTSHHHHHHHHHHHHTTCE-EEEEESSGGGHHHHHHTTCS-EEEEC-----------CT----
T ss_pred CCCCCCCCC--EEEEECCCCHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHCCCC-CCCCC-----------CH----
T ss_conf 644577999--0899999888999999999978598-99998887881355523553-31134-----------30----
Q ss_pred HHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHH--------HHHHHHHHHCCCEEEEEEECCCCCC
Q ss_conf 99997299999972699899998036766674078--------9999999864984999950430004
Q gi|254781176|r 83 AAAEECIDEITEMLDKTHMCFVTAGMGGGTGTGAA--------PIIAKIARNKGVLTVGVVTKPFHFE 142 (502)
Q Consensus 83 ~~a~~~~~~i~~~~~~~~~~~~~ag~gggtgtg~~--------p~ia~~a~~~~~~~~~~v~~pf~~e 142 (502)
.+.+.+++++.|.||.++|.+...+.... --+.+.|++.|+-.+.+++....+.
T Consensus 75 ------~~~~~~a~~~~d~vi~~~~~~~~~~~~~~~~~~~~~~~~li~aa~~~~v~~~v~~ss~~~~~ 136 (236)
T 3e8x_A 75 ------EEDFSHAFASIDAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGTVD 136 (236)
T ss_dssp ------TSCCGGGGTTCSEEEECCCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTCSC
T ss_pred ------HHHHHHHCCCCCHHHHCCCCCCCCCCCCCEEECCCCCHHHHHHHHHCCCCEEEEEECCCCCC
T ss_conf ------33333312454533311034677786521343123416788888755966899994240057
No 59
>6ldh_A M4 APO-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); 2.00A {Squalus acanthias} SCOP: c.2.1.5 d.162.1.1 PDB: 8ldh_A* 1ldm_A* 9ldt_A* 9ldb_A* 1i10_A* 3ldh_A* 3h3f_A* 1t2f_A* 1i0z_A* 5ldh_A* 1v6a_A*
Probab=92.67 E-value=0.29 Score=27.02 Aligned_cols=104 Identities=19% Similarity=0.271 Sum_probs=60.3
Q ss_pred EEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCH-----HHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 17999966814799999998589984499982557-----8855189970485155425567888883899999997299
Q gi|254781176|r 16 RITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDA-----QALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAEECID 90 (502)
Q Consensus 16 ~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~-----~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~~~ 90 (502)
||.|||.|+-|..+..++...++- -+++.++.+. ++|+.+.+....... ..+ +++|++
T Consensus 23 KI~IiGaG~VG~~~a~~l~~~~l~-~el~L~D~~~~~a~g~a~DL~h~~~~~~~~-~~~----~~~d~~----------- 85 (330)
T 6ldh_A 23 KITVVGVGAVGMACAISILMKDLA-DEVALVDVMEDKLKGEMMDLQHGSLFLHTA-KIV----SGKDYS----------- 85 (330)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCC-SEEEEECSCHHHHHHHHHHHHHTGGGCCCS-CEE----EESSGG-----------
T ss_pred EEEEECCCHHHHHHHHHHHHCCCC-CEEEEEECCCCCHHHHHHHHHCCCCCCCCC-EEE----CCCCHH-----------
T ss_conf 799989898999999999827998-879999189981599999987576557998-498----488678-----------
Q ss_pred HHHHHHCCCCEEEEEECCCCCCCCCH-------HHHHHHHHHHC----CCEEEEEEECCCC
Q ss_conf 99997269989999803676667407-------89999999864----9849999504300
Q gi|254781176|r 91 EITEMLDKTHMCFVTAGMGGGTGTGA-------APIIAKIARNK----GVLTVGVVTKPFH 140 (502)
Q Consensus 91 ~i~~~~~~~~~~~~~ag~gggtgtg~-------~p~ia~~a~~~----~~~~~~~v~~pf~ 140 (502)
.+.++|+|+|+||.--..|.-- +.++.++++.+ ---.|.|||-|-+
T Consensus 86 ----~~~~advvvi~ag~~rkpg~~R~dl~~~Na~i~~~~~~~i~~~~p~~~vivvsNPvd 142 (330)
T 6ldh_A 86 ----VSAGSKLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKHSPDCIILVVSNPVD 142 (330)
T ss_dssp ----GGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHH
T ss_pred ----HHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCH
T ss_conf ----846775899716888999998789988679999999987762299729998168713
No 60
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=92.63 E-value=0.4 Score=26.06 Aligned_cols=140 Identities=12% Similarity=0.103 Sum_probs=75.7
Q ss_pred EEEEEEECCCHH-HHHHHHHH--CCCCCCEEEEECCCHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 179999668147-99999998--589984499982557885518997048515542556788888389999999729999
Q gi|254781176|r 16 RITVFGVGGGGG-NAVNNMVS--SGLQGVNFVVANTDAQALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAEECIDEI 92 (502)
Q Consensus 16 ~i~v~g~gg~g~-n~~~~~~~--~~~~~~~~~~~ntd~~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~~~~i 92 (502)
||.+||=|+.-. ..|..++. ..+.+-+++-++.|...|.....-.+... +-.|+ +++ .+.--..
T Consensus 30 KI~iIGaGS~~t~~li~~~~~~~~~l~~~ei~L~DId~~rL~~~~~~~~~~~-----~~~~~--~~~------v~~ttD~ 96 (472)
T 1u8x_X 30 SIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFI-----REKAP--DIE------FAATTDP 96 (472)
T ss_dssp EEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHH-----HHHCT--TSE------EEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHH-----HHHCC--CEE------EEEECCH
T ss_conf 3999898656568999999960532788889998288889999999999999-----96099--807------9995899
Q ss_pred HHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH-HHHH
Q ss_conf 997269989999803676667407899999998649849999504300040678888999999999863335450-2788
Q gi|254781176|r 93 TEMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPFHFEGSRRMRVAESGIEALQETVDTLIVI-PNQN 171 (502)
Q Consensus 93 ~~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf~~eg~~r~~~a~~~~~~l~~~~d~~i~i-~n~~ 171 (502)
+++|+|+|.||++++-||-. +--.-=+|..+.|++- + ..=|.-.+-.|...+.-+.+.+..+--+ ||=-
T Consensus 97 ~eAl~gADfVi~t~~vGg~~---~r~~De~Ip~kyGi~g-~------eT~G~GG~~~alRtipv~leIa~~I~e~~PdAw 166 (472)
T 1u8x_X 97 EEAFTDVDFVMAHIRVGKYA---MRALDEQIPLKYGVVG-Q------ETCGPGGIAYGMRSIGGVLEILDYMEKYSPDAW 166 (472)
T ss_dssp HHHHSSCSEEEECCCTTHHH---HHHHHHHHHHTTTCCC-C------SSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTCE
T ss_pred HHHHCCCCEEEEEECCCCCC---HHHHHHHHHHHCCCCC-C------CCCCCCHHHHHCCCHHHHHHHHHHHHHHCCCEE
T ss_conf 99857999999841228864---2688875467559156-4------135623888740328999999999996699849
Q ss_pred HHHHCCC
Q ss_conf 8741366
Q gi|254781176|r 172 LFRIAND 178 (502)
Q Consensus 172 l~~~~~~ 178 (502)
|+...+|
T Consensus 167 llNyTNP 173 (472)
T 1u8x_X 167 MLNYSNP 173 (472)
T ss_dssp EEECCSC
T ss_pred EEEECCH
T ss_conf 9981786
No 61
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=92.54 E-value=0.024 Score=35.05 Aligned_cols=96 Identities=23% Similarity=0.364 Sum_probs=59.8
Q ss_pred EEEEEECCCHHHHHHHHHHCCCCCCEEEEECCC-----HHHHHHCC------CCEEEEECCCCCCCCCCCCCHHHHHHHH
Q ss_conf 799996681479999999858998449998255-----78855189------9704851554255678888838999999
Q gi|254781176|r 17 ITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTD-----AQALMMSK------AKQIIQLGSGITEGLGAGSHPEVGRAAA 85 (502)
Q Consensus 17 i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd-----~~~l~~~~------~~~~~~~g~~~~~g~g~g~~~~~g~~~a 85 (502)
|.|||.|+-|..+...+...++. ++..++.+ .++++.+. .+.++- +.+++
T Consensus 2 I~IiGaG~VG~~~a~~l~~~~~~--el~L~D~~~~~~~G~a~DL~h~~~~~~~~~~i~----------~~~~~------- 62 (308)
T 2d4a_B 2 ITILGAGKVGMATAVMLMMRGYD--DLLLIARTPGKPQGEALDLAHAAAELGVDIRIS----------GSNSY------- 62 (308)
T ss_dssp EEEECCSHHHHHHHHHHHHHTCS--CEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEE----------EESCG-------
T ss_pred EEEECCCHHHHHHHHHHHCCCCC--EEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEE----------ECCCH-------
T ss_conf 89999798999999999808999--799993888767888886660022358861998----------17888-------
Q ss_pred HHHHHHHHHHHCCCCEEEEEECCCCCCCC---CH----HHHHHHHHHHC-----CCEEEEEEECCCC
Q ss_conf 97299999972699899998036766674---07----89999999864-----9849999504300
Q gi|254781176|r 86 EECIDEITEMLDKTHMCFVTAGMGGGTGT---GA----APIIAKIARNK-----GVLTVGVVTKPFH 140 (502)
Q Consensus 86 ~~~~~~i~~~~~~~~~~~~~ag~gggtgt---g~----~p~ia~~a~~~-----~~~~~~~v~~pf~ 140 (502)
+.++++|+|+|+||..-..|. .. ++++.++++.. .+ .|.|||=|-+
T Consensus 63 --------~~~~~adiVvi~ag~~~~~g~~R~~ll~~Na~i~~~i~~~i~~~~p~a-ivlvvsNPvd 120 (308)
T 2d4a_B 63 --------EDMRGSDIVLVTAGIGRKPGMTREQLLEANANTMADLAEKIKAYAKDA-IVVITTNPVD 120 (308)
T ss_dssp --------GGGTTCSEEEECCSCCCCSSCCTHHHHHHHHHHHHHHHHHHHHHCTTC-EEEECCSSHH
T ss_pred --------HHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC-EEEEECCCCC
T ss_conf --------996899899988998889999878999988899999999987346881-8999478641
No 62
>1x92_A APC5045, phosphoheptose isomerase; midwest centre for structural genomics, SIS domain, A/B protein, lipopolysaccharide biosynthesis, PSI; HET: M7P; 2.30A {Pseudomonas aeruginosa} SCOP: c.80.1.3 PDB: 3bjz_A
Probab=92.26 E-value=0.14 Score=29.41 Aligned_cols=121 Identities=17% Similarity=0.278 Sum_probs=70.9
Q ss_pred CCEEEEEEECCCHHHHHH---HHHH---CCCCCCEEEEECCCHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 861799996681479999---9998---5899844999825578855189970485155425567888883899999997
Q gi|254781176|r 14 KPRITVFGVGGGGGNAVN---NMVS---SGLQGVNFVVANTDAQALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAEE 87 (502)
Q Consensus 14 ~~~i~v~g~gg~g~n~~~---~~~~---~~~~~~~~~~~ntd~~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~ 87 (502)
.-||.++|.||.+.++-. .+.. ..-.+...+++.+|...+.....+. |. ..-
T Consensus 45 ~~kI~~~GnGgSaa~A~h~a~dl~~~~~~~~~~l~~i~l~~~~~~~ta~~Nd~----g~------------------~~~ 102 (199)
T 1x92_A 45 EGKILSCGNGGSAGDAQHFSSELLNRFERERPSLPAVALTTDSSTITSIANDY----SY------------------NEV 102 (199)
T ss_dssp TCCEEEECSTHHHHHHHHHHHHHHTCSSSCCCCCCEEETTCCHHHHHHHHHHT----CG------------------GGT
T ss_pred CCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCHHHHHCCCCC----CH------------------HHH
T ss_conf 99899997866277799999997330002544443577568813443202676----69------------------999
Q ss_pred HHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 29999997269989999803676667407899999998649849999504300040678888999999999863335450
Q gi|254781176|r 88 CIDEITEMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPFHFEGSRRMRVAESGIEALQETVDTLIVI 167 (502)
Q Consensus 88 ~~~~i~~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf~~eg~~r~~~a~~~~~~l~~~~d~~i~i 167 (502)
-.++++...+.-|++++..+=|+ +-.---.++.||++|+.||+++.. .|. .+..|...+|..|.+
T Consensus 103 f~~ql~~~~~~gDvli~iS~SG~---S~nii~a~~~Ak~~g~~~i~ltG~----~gg--------~~~~l~~~~Di~i~v 167 (199)
T 1x92_A 103 FSKQIRALGQPGDVLLAISTSGN---SANVIQAIQAAHDREMLVVALTGR----DGG--------GMASLLLPEDVEIRV 167 (199)
T ss_dssp THHHHHHHCCTTCEEEEECSSSC---CHHHHHHHHHHHHTTCEEEEEECT----TCH--------HHHHHCCTTCEEEEC
T ss_pred HHHHHHHCCCCCCEEEEEECCCC---CCCHHHHHHHHHHCCCEEEEEECC----CCC--------CHHHCCCCCCEEEEE
T ss_conf 99999963789988999847999---945789999999869969999817----885--------176515668889995
Q ss_pred HHHH
Q ss_conf 2788
Q gi|254781176|r 168 PNQN 171 (502)
Q Consensus 168 ~n~~ 171 (502)
|-+.
T Consensus 168 ps~~ 171 (199)
T 1x92_A 168 PSKI 171 (199)
T ss_dssp SCSC
T ss_pred CCCC
T ss_conf 8997
No 63
>2nvu_B Maltose binding protein/NEDD8-activating enzyme E1 catalytic subunit chimera; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: c.111.1.2 c.94.1.1
Probab=91.93 E-value=0.49 Score=25.41 Aligned_cols=115 Identities=12% Similarity=0.174 Sum_probs=52.1
Q ss_pred HCCCCCHHHHHHHHHHHHHHHH----HHHHHHHHHCCCCCCCCH-----HHHHHHHCCCCEEEEEEEECCCCCHHHHHHH
Q ss_conf 1366531899974467999999----888887651665555898-----7878764158658998761486204899998
Q gi|254781176|r 175 IANDKTTFADAFSMADQVLYSG----VSCITDLMIKEGLINLDF-----ADVRSVMRNMGRAMMGTGEASGHGRGIQAAE 245 (502)
Q Consensus 175 ~~~~~~~~~~af~~~d~~l~~~----v~~i~~~i~~~g~in~df-----~d~~~v~~~~g~a~~g~g~~~g~~r~~~a~~ 245 (502)
+.....+..+|++-|.+-+.+. -+.|..++.+||--.-+- ..+...|+++-.-++|.|- -| .+.++
T Consensus 354 v~~G~~tpeeAL~~Aq~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~kVLvvG~gg-lG----~Ei~K 428 (805)
T 2nvu_B 354 AASGRQTVDAALAAAQTNAAADWEGRWNHVKKFLERSGPFTHPDFEPSTESLQFLLDTCKVLVIGAGG-LG----CELLK 428 (805)
T ss_dssp HHTTSSCHHHHHHHHHHHHSSSCTTTTHHHHHHHHSCCTTSCTTCCCCSHHHHHHHHTCCEEEECCSS-HH----HHHHH
T ss_pred HHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCEEECCCCH-HH----HHHHH
T ss_conf 98599956899999999876544312126788752899999999788857899997249689449789-99----99999
Q ss_pred HHHHCC-----CCCCCCC--CCC-CEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEE
Q ss_conf 875270-----1000224--555-3789996168888999999999999974168863999
Q gi|254781176|r 246 AAVANP-----LLDEASM--KGS-QGLLISITGGSDLTLFEVDEAATRIREEVDSEANIIL 298 (502)
Q Consensus 246 ~a~~~p-----ll~~~~~--~~a-~~~l~~i~~~~~~~l~e~~~~~~~i~~~~~~~a~ii~ 298 (502)
.-.-+- |+|...+ ..- +..| ..-.|+...-..-+..++++ .+|.++|..
T Consensus 429 nL~l~Gv~~i~i~D~d~V~~snL~rQfl---~~~~dvGk~Ka~~a~~~l~~-lNp~v~i~~ 485 (805)
T 2nvu_B 429 NLALSGFRQIHVIDMDTIDVSNLNRQFL---FRPKDIGRPKAEVAAEFLND-RVPNCNVVP 485 (805)
T ss_dssp HHHTTTCCEEEEEECCBCCGGGGGTCTT---CCGGGTTSBHHHHHHHHHHH-HSTTCEEEE
T ss_pred HHHHCCCCEEEEECCCEECHHHCCCCCC---CCHHHCCCHHHHHHHHHHHH-HCCCCEEEE
T ss_conf 9998499859998598506766686811---57466897699999999998-789988999
No 64
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2jfg_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=91.65 E-value=0.36 Score=26.34 Aligned_cols=85 Identities=20% Similarity=0.267 Sum_probs=46.7
Q ss_pred CEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCH--HHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 617999966814799999998589984499982557--885518997048515542556788888389999999729999
Q gi|254781176|r 15 PRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDA--QALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAEECIDEI 92 (502)
Q Consensus 15 ~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~--~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~~~~i 92 (502)
-||.|+|+||.|-.+...+...|. +....+... ..+.......+...|. -++
T Consensus 6 k~i~iiG~G~sG~s~a~~l~~~G~---~v~~~D~~~~~~~~~~l~~~~~~~~~~---------~~~-------------- 59 (439)
T 2x5o_A 6 KNVVIIGLGLTGLSCVDFFLARGV---TPRVMDTRMTPPGLDKLPEAVERHTGS---------LND-------------- 59 (439)
T ss_dssp CCEEEECCHHHHHHHHHHHHTTTC---CCEEEESSSSCTTGGGSCTTSCEEESS---------CCH--------------
T ss_pred CEEEEEEECHHHHHHHHHHHHCCC---EEEEEECCCCCCHHHHHHHCCCEEECC---------CCH--------------
T ss_conf 999999988999999999997879---499997989921589998489876368---------797--------------
Q ss_pred HHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEE
Q ss_conf 9972699899998036766674078999999986498499
Q gi|254781176|r 93 TEMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTV 132 (502)
Q Consensus 93 ~~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~ 132 (502)
+.++++|+|++..|.--. -|.+ +.|++.|+-++
T Consensus 60 -~~~~~~d~vV~SpgI~~~-----~p~l-~~a~~~~i~i~ 92 (439)
T 2x5o_A 60 -EWLMAADLIVASPGIALA-----HPSL-SAAADAGIEIV 92 (439)
T ss_dssp -HHHHTCSEEEECTTSCTT-----CHHH-HHHHHTTCEEE
T ss_pred -HHCCCCCEEEECCCCCCC-----CHHH-HHHHHCCCCEE
T ss_conf -785899899989913999-----9999-99998599287
No 65
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=91.54 E-value=0.69 Score=24.27 Aligned_cols=95 Identities=12% Similarity=0.240 Sum_probs=64.2
Q ss_pred CCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHCCCC-EEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 8617999966814799999998589984499982557885518997-048515542556788888389999999729999
Q gi|254781176|r 14 KPRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDAQALMMSKAK-QIIQLGSGITEGLGAGSHPEVGRAAAEECIDEI 92 (502)
Q Consensus 14 ~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~~~l~~~~~~-~~~~~g~~~~~g~g~g~~~~~g~~~a~~~~~~i 92 (502)
+.++-|+|.|--|..++..|...| .+++++++|.+.+...... ..+..| -+.+|++ +
T Consensus 6 ~~~~iIiG~G~~G~~la~~L~~~g---~~vvviD~d~~~~~~~~~~g~~~v~g--------D~td~~~-----------L 63 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMG---HEVLAVDINEEKVNAYASYATHAVIA--------NATEENE-----------L 63 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTT---CCCEEEESCHHHHHTTTTTCSEEEEC--------CTTCHHH-----------H
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHCCCEEEEE--------CCCCHHH-----------H
T ss_conf 783999887899999999999889---91999979679999998539749993--------1788888-----------8
Q ss_pred HHH-HCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEE
Q ss_conf 997-269989999803676667407899999998649849999
Q gi|254781176|r 93 TEM-LDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGV 134 (502)
Q Consensus 93 ~~~-~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~ 134 (502)
+++ ++.+++||++.+-- ....-.++.++|..|...+.+
T Consensus 64 ~~a~i~~a~~vii~~~~d----~~~~~~~~~~~~~~~~~~ii~ 102 (144)
T 2hmt_A 64 LSLGIRNFEYVIVAIGAN----IQASTLTTLLLKELDIPNIWV 102 (144)
T ss_dssp HTTTGGGCSEEEECCCSC----HHHHHHHHHHHHHTTCSEEEE
T ss_pred HHCCCCCCCEEEEEECCC----HHHHHHHHHHHHHCCCCEEEE
T ss_conf 630223499999981886----899999999998779985999
No 66
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding motifs, MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=91.44 E-value=0.71 Score=24.20 Aligned_cols=103 Identities=17% Similarity=0.228 Sum_probs=59.7
Q ss_pred CCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCHH---HHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHH---
Q ss_conf 86179999668147999999985899844999825578---855189970485155425567888883899999997---
Q gi|254781176|r 14 KPRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDAQ---ALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAEE--- 87 (502)
Q Consensus 14 ~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~~---~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~--- 87 (502)
+-||.|+|.||-|+.++..+...|+. +++.++-|.- +|.+......-.+|.. +.++.++...+
T Consensus 31 ~~~VliiG~GglGs~va~~La~~Gvg--~i~lvD~D~ve~sNl~Rq~l~~~~diG~~---------K~~~~~~~l~~~np 99 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVG--NLTLLDFDTVSLSNLQRQTLHSDATVGQP---------KVESARDALTRINP 99 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCS--EEEEECCCBCCGGGGGTCTTCCGGGTTSB---------HHHHHHHHHHHHCT
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCC--EEEEEECCCCCHHHHHHHHHCCHHHCCCC---------HHHHHHHHHHHHHC
T ss_conf 59889989788999999999985998--69998188677213212241526344970---------49999999997401
Q ss_pred -----------HHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEE
Q ss_conf -----------299999972699899998036766674078999999986498499
Q gi|254781176|r 88 -----------CIDEITEMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTV 132 (502)
Q Consensus 88 -----------~~~~i~~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~ 132 (502)
........+.+.|+||.++. ..-+.-.|.+.+++.++..+
T Consensus 100 ~~~i~~~~~~~~~~~~~~~~~~~d~vi~~~d-----~~~~~~~in~~~~~~~ip~i 150 (249)
T 1jw9_B 100 HIAITPVNALLDDAELAALIAEHDLVLDCTD-----NVAVRNQLNAGCFAAKVPLV 150 (249)
T ss_dssp TSEEEEECSCCCHHHHHHHHHTSSEEEECCS-----SHHHHHHHHHHHHHHTCCEE
T ss_pred CCCCHHHHHHCCCCCHHHHCCCCEEEEECCC-----CHHHHHHHHHHHHHHCCCCC
T ss_conf 4431002221010121231567359982488-----29999999999998098955
No 67
>2xbl_A Phosphoheptose isomerase; capsule; HET: M7P PGE PG4; 1.62A {Burkholderia pseudomallei} PDB: 2x3y_A
Probab=91.11 E-value=0.76 Score=23.97 Aligned_cols=113 Identities=19% Similarity=0.275 Sum_probs=68.8
Q ss_pred CCEEEEEEECCCHHHHHHHHHH--CCC----CCCEEEEECCCHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 8617999966814799999998--589----9844999825578855189970485155425567888883899999997
Q gi|254781176|r 14 KPRITVFGVGGGGGNAVNNMVS--SGL----QGVNFVVANTDAQALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAEE 87 (502)
Q Consensus 14 ~~~i~v~g~gg~g~n~~~~~~~--~~~----~~~~~~~~ntd~~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~ 87 (502)
.-||.++|.||.+..+-..-.+ ... .+...+..+.+...+.. .+...
T Consensus 48 ~gkI~~~G~G~S~~~A~~~a~~l~~~~~~~r~~l~a~~l~~~~~~~ta---------------------------~~nd~ 100 (198)
T 2xbl_A 48 GGKVLLAGNGGSAADAQHIAGEFVSRFAFDRPGLPAVALTTDTSILTA---------------------------IGNDY 100 (198)
T ss_dssp TCCEEEECSTHHHHHHHHHHHHHHSCSSSCCCCCCEEETTCCHHHHHH---------------------------HHHHH
T ss_pred CCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCC---------------------------CCCCC
T ss_conf 997999978800777999999971111146645157873376431204---------------------------00346
Q ss_pred -----HHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf -----299999972699899998036766674078999999986498499995043000406788889999999998633
Q gi|254781176|r 88 -----CIDEITEMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPFHFEGSRRMRVAESGIEALQETVD 162 (502)
Q Consensus 88 -----~~~~i~~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf~~eg~~r~~~a~~~~~~l~~~~d 162 (502)
-...++...+--|+||+...=|. |-..--.+++||+.|+.|+++...+ |. .|.+.+|
T Consensus 101 ~~~~~~~~ql~~~~~~gDvli~iS~SG~---s~~ii~a~~~Ak~~g~~~iaitg~~----~~-----------~l~~~~D 162 (198)
T 2xbl_A 101 GYEKLFSRQVQALGNEGDVLIGYSTSGK---SPNILAAFREAKAKGMTCVGFTGNR----GG-----------EMRELCD 162 (198)
T ss_dssp CGGGTTHHHHHHHCCTTCEEEEECSSSC---CHHHHHHHHHHHHTTCEEEEEECSC----CC-----------THHHHCS
T ss_pred CHHHHHHHHHHHCCCCCCEEEEECCCCC---CHHHHHHHHHHHHCCCEEEEEECCC----CC-----------HHHHHCC
T ss_conf 6789999999962799998999708999---7689999999998599899996899----85-----------4688599
Q ss_pred HHHHHHHHH
Q ss_conf 354502788
Q gi|254781176|r 163 TLIVIPNQN 171 (502)
Q Consensus 163 ~~i~i~n~~ 171 (502)
-.|.||-+.
T Consensus 163 ~~i~ips~~ 171 (198)
T 2xbl_A 163 LLLEVPSAD 171 (198)
T ss_dssp EEEECSCSS
T ss_pred EEEEECCCC
T ss_conf 999979998
No 68
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=91.11 E-value=0.76 Score=23.97 Aligned_cols=94 Identities=13% Similarity=0.147 Sum_probs=61.2
Q ss_pred HHCCCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHCCC-CEEEEECCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 543861799996681479999999858998449998255788551899-7048515542556788888389999999729
Q gi|254781176|r 11 TELKPRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDAQALMMSKA-KQIIQLGSGITEGLGAGSHPEVGRAAAEECI 89 (502)
Q Consensus 11 ~~~~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~~~l~~~~~-~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~~ 89 (502)
+--|-||.|+|.|+.|.-++..|.+ . -+...++.+...+.+... ...+++. ..+.
T Consensus 13 ~~~~mki~vlG~G~vG~~~~~~L~~-~---~~v~~~~~~~~~~~~~~~~~~~~~~d--------------------~~~~ 68 (365)
T 2z2v_A 13 EGRHMKVLILGAGNIGRAIAWDLKD-E---FDVYIGDVNNENLEKVKEFATPLKVD--------------------ASNF 68 (365)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHTT-T---SEEEEEESCHHHHHHHTTTSEEEECC--------------------TTCH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHC-C---CCEEEEECCHHHHHHHHHHCCCEEEE--------------------CCCH
T ss_conf 5872579999975999999999864-7---98699987788899877427736873--------------------4999
Q ss_pred HHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEE
Q ss_conf 999997269989999803676667407899999998649849999
Q gi|254781176|r 90 DEITEMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGV 134 (502)
Q Consensus 90 ~~i~~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~ 134 (502)
+.+.+.++++|+|+.++| ....+-|++.|-+.|+-.+-+
T Consensus 69 ~~l~~~~~~~d~Vi~~~~------~~~~~~v~~~~~~~g~~yiD~ 107 (365)
T 2z2v_A 69 DKLVEVMKEFELVIGALP------GFLGFKSIKAAIKSKVDMVDV 107 (365)
T ss_dssp HHHHHHHTTCSCEEECCC------HHHHHHHHHHHHHTTCCEEEC
T ss_pred HHHHHHHHCCCEEEECCC------CCCHHHHHHHHHHCCCCCCCC
T ss_conf 999999735899999678------510258999987528522112
No 69
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=90.67 E-value=0.03 Score=34.39 Aligned_cols=100 Identities=21% Similarity=0.344 Sum_probs=61.2
Q ss_pred CCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCC-----HHHHHHCC------CCEEEEECCCCCCCCCCCCCHHHHH
Q ss_conf 861799996681479999999858998449998255-----78855189------9704851554255678888838999
Q gi|254781176|r 14 KPRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTD-----AQALMMSK------AKQIIQLGSGITEGLGAGSHPEVGR 82 (502)
Q Consensus 14 ~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd-----~~~l~~~~------~~~~~~~g~~~~~g~g~g~~~~~g~ 82 (502)
+.||.|||.|.-|..+...+...++ .+++.++.+ .++++.+. ...++ .+. ++
T Consensus 4 ~~KV~IiGaG~VG~~~A~~l~~~~~--~el~L~Di~~~~~~g~a~Dl~h~~~~~~~~~~~-~~~---------~~----- 66 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNL--ADVVLFDIAEGIPQGKALDITHSMVMFGSTSKV-IGT---------DD----- 66 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTC--CEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCE-EEE---------SC-----
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC--CEEEEECCCCCCCCEEEEHHHCCCCCCCCCCEE-EEC---------CC-----
T ss_conf 9979998989899999999971899--879998489993532030965867435887469-605---------88-----
Q ss_pred HHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCC-------HHHHHHHHHHHC----CCEEEEEEECCCC
Q ss_conf 999972999999726998999980367666740-------789999999864----9849999504300
Q gi|254781176|r 83 AAAEECIDEITEMLDKTHMCFVTAGMGGGTGTG-------AAPIIAKIARNK----GVLTVGVVTKPFH 140 (502)
Q Consensus 83 ~~a~~~~~~i~~~~~~~~~~~~~ag~gggtgtg-------~~p~ia~~a~~~----~~~~~~~v~~pf~ 140 (502)
.+.+.++|+|+|+||..-..|.- -+.++.++++.. ---.+.+||=|-+
T Consensus 67 ----------~~~~~~adivVi~ag~~r~~g~~R~dl~~~Na~I~~~i~~~i~~~~p~~ivivvtNPvd 125 (317)
T 2ewd_A 67 ----------YADISGSDVVIITASIPGRPKDDRSELLFGNARILDSVAEGVKKYCPNAFVICITNPLD 125 (317)
T ss_dssp ----------GGGGTTCSEEEECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHH
T ss_pred ----------HHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCH
T ss_conf ----------78957898799947888998989899977345689999999996499947999248704
No 70
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, transferase/biosynthetic protein complex; 1.98A {Escherichia coli K12} PDB: 1zfn_A* 1zkm_A
Probab=90.28 E-value=0.31 Score=26.87 Aligned_cols=102 Identities=12% Similarity=0.190 Sum_probs=56.3
Q ss_pred CCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCHH---HHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHH---
Q ss_conf 86179999668147999999985899844999825578---855189970485155425567888883899999997---
Q gi|254781176|r 14 KPRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDAQ---ALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAEE--- 87 (502)
Q Consensus 14 ~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~~---~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~--- 87 (502)
+-||.|||+||-|+.++..|...|+. .+..++-|.- +|.+...-..=.+|+. +.++.++...+
T Consensus 28 ~~~VlIvG~GglGs~ia~~La~~Gvg--~i~lvD~D~ve~sNL~Rq~l~~~~dvGk~---------K~~~~~~~l~~~n~ 96 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGAGVG--TLVLADDDDVHLSNLQRQILFTTEDIDRP---------KSQVSQQRLTQLNP 96 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTCS--EEEEECCCBCCGGGTTTCTTCCGGGTTSB---------HHHHHHHHHHHHCT
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCC--EEEEECCCCCCCCHHHHHHCCCHHHHHCC---------CHHHHHHHHHHHCC
T ss_conf 69899994398999999999976997--79985597454447676415798898460---------38999999997688
Q ss_pred -----------HHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEE
Q ss_conf -----------29999997269989999803676667407899999998649849
Q gi|254781176|r 88 -----------CIDEITEMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLT 131 (502)
Q Consensus 88 -----------~~~~i~~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~ 131 (502)
....+...+.+.|+||.++. ---+--.+.+++.+.++-.
T Consensus 97 ~~~i~~~~~~~~~~~~~~~~~~~d~Vi~~~D-----~~~~~~~~n~~~~~~~ip~ 146 (251)
T 1zud_1 97 DIQLTALQQRLTGEALKDAVARADVVLDCTD-----NMATRQEINAACVALNTPL 146 (251)
T ss_dssp TSEEEEECSCCCHHHHHHHHHHCSEEEECCS-----SHHHHHHHHHHHHHTTCCE
T ss_pred CCCCCHHHHHHHHHHHHHHCCCCCEEEECCC-----CHHHHHHHHHHHHHCCCCC
T ss_conf 6432125555434313341446617984688-----5899999999998639982
No 71
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=90.13 E-value=0.91 Score=23.37 Aligned_cols=94 Identities=12% Similarity=0.056 Sum_probs=64.4
Q ss_pred CCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHCCCCE-EEE-ECCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 86179999668147999999985899844999825578855189970-485-1554255678888838999999972999
Q gi|254781176|r 14 KPRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDAQALMMSKAKQ-IIQ-LGSGITEGLGAGSHPEVGRAAAEECIDE 91 (502)
Q Consensus 14 ~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~~~l~~~~~~~-~~~-~g~~~~~g~g~g~~~~~g~~~a~~~~~~ 91 (502)
+-||.|+|.|+.|.-++.++.+.+ .+.+.++-+...+....... ++. +... ..+.+.
T Consensus 3 ~k~v~v~GaG~~g~~~~~~L~~~~---~~v~va~r~~~~~~~~~~~~~~~~~~~~d------------------~~d~~~ 61 (450)
T 1ff9_A 3 TKSVLMLGSGFVTRPTLDVLTDSG---IKVTVACRTLESAKKLSAGVQHSTPISLD------------------VNDDAA 61 (450)
T ss_dssp CCEEEEECCSTTHHHHHHHHHTTT---CEEEEEESSHHHHHHTTTTCTTEEEEECC------------------TTCHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHCCCCCEEEEC------------------CCCHHH
T ss_conf 887999888799999999998396---96999979999999999758998549961------------------799999
Q ss_pred HHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEE
Q ss_conf 9997269989999803676667407899999998649849999
Q gi|254781176|r 92 ITEMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGV 134 (502)
Q Consensus 92 i~~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~ 134 (502)
+.++++++|+|+.+++- - ..+-+++.|-+.|.-.|-+
T Consensus 62 l~~~~~~~dvVi~~~p~--~----~~~~~~~~~~~~g~~~vd~ 98 (450)
T 1ff9_A 62 LDAEVAKHDLVISLIPY--T----FHATVIKSAIRQKKHVVTT 98 (450)
T ss_dssp HHHHHTTSSEEEECCC--------CHHHHHHHHHHHTCEEEES
T ss_pred HHHHHCCCCEEEECCCC--H----HCHHHHHHHHHCCCCEEEC
T ss_conf 99987189999999982--0----0589999999739848951
No 72
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A*
Probab=90.12 E-value=0.36 Score=26.32 Aligned_cols=76 Identities=18% Similarity=0.289 Sum_probs=43.2
Q ss_pred EEEEEEE-CCCHHHHHHHHHHCCCCCCEEEEECCCHH----HHH--HCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 1799996-68147999999985899844999825578----855--1899704851554255678888838999999972
Q gi|254781176|r 16 RITVFGV-GGGGGNAVNNMVSSGLQGVNFVVANTDAQ----ALM--MSKAKQIIQLGSGITEGLGAGSHPEVGRAAAEEC 88 (502)
Q Consensus 16 ~i~v~g~-gg~g~n~~~~~~~~~~~~~~~~~~ntd~~----~l~--~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~ 88 (502)
||.|||. |-.|....-.+.......-+++.+|++.. +|+ .+....+... . .|.++
T Consensus 2 KV~IiGaaG~VG~~~A~~l~~~~~~~~el~LiD~~~~~~g~a~Dl~~~~~~~~~~~---~-----~~~~~---------- 63 (312)
T 3hhp_A 2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKG---F-----SGEDA---------- 63 (312)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSSTTHHHHHHHHHTSCSSEEEEE---E-----CSSCC----------
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCE---E-----ECCCH----------
T ss_conf 79999589769999999999689978879998789986538988765832167627---9-----75880----------
Q ss_pred HHHHHHHHCCCCEEEEEECCCCCCC
Q ss_conf 9999997269989999803676667
Q gi|254781176|r 89 IDEITEMLDKTHMCFVTAGMGGGTG 113 (502)
Q Consensus 89 ~~~i~~~~~~~~~~~~~ag~gggtg 113 (502)
.+.+.++|+|+||||---..|
T Consensus 64 ----~~~~~~aDvvvitaG~~~k~g 84 (312)
T 3hhp_A 64 ----TPALEGADVVLISAGVARKPG 84 (312)
T ss_dssp ----HHHHTTCSEEEECCSCSCCTT
T ss_pred ----HHHHCCCCEEEECCCCCCCCC
T ss_conf ----788589989999989888899
No 73
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=89.68 E-value=0.13 Score=29.52 Aligned_cols=102 Identities=14% Similarity=0.192 Sum_probs=57.7
Q ss_pred CCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECC---CHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHH----
Q ss_conf 86179999668147999999985899844999825---57885518997048515542556788888389999999----
Q gi|254781176|r 14 KPRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANT---DAQALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAE---- 86 (502)
Q Consensus 14 ~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~nt---d~~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~---- 86 (502)
+-||.|+|.||.||-++..|...|+.. +..++- +..+|.+.---..=.+|+ |.. ..++.
T Consensus 32 ~s~VlivG~gglG~eiaknLvl~GVg~--itivD~d~v~~snL~rqf~~~~~diGk-----------~ka-~~~~~~L~~ 97 (531)
T 1tt5_A 32 SAHVCLINATATGTEILKNLVLPGIGS--FTIIDGNQVSGEDAGNNFFLQRSSIGK-----------NRA-EAAMEFLQE 97 (531)
T ss_dssp HCEEEEECCSHHHHHHHHHHHTTTCSE--EEEECCCBBCHHHHHHCTTCCGGGBTS-----------BHH-HHHHHHHHT
T ss_pred CCCEEEECCCHHHHHHHHHHHHHCCCE--EEEECCCCCCHHHCCCCCCCCHHHCCC-----------HHH-HHHHHHHHH
T ss_conf 698899888899999999999817988--999879938977749310578454688-----------699-999999998
Q ss_pred -----------HHHHHH----HHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEE
Q ss_conf -----------729999----997269989999803676667407899999998649849999
Q gi|254781176|r 87 -----------ECIDEI----TEMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGV 134 (502)
Q Consensus 87 -----------~~~~~i----~~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~ 134 (502)
++...+ ...+.+.|+|+.+. .-.-..-.+.+++++.++-.|..
T Consensus 98 lNp~v~i~~~~~~~~~~~~~~~~~~~~~dvVi~~~-----~~~~~~~~ln~~c~~~~ip~I~~ 155 (531)
T 1tt5_A 98 LNSDVSGSFVEESPENLLDNDPSFFCRFTVVVATQ-----LPESTSLRLADVLWNSQIPLLIC 155 (531)
T ss_dssp TCTTSBCCEESSCHHHHHHSCGGGGGGCSEEEEES-----CCHHHHHHHHHHHHHTTCCEEEE
T ss_pred HCCCCCEEEECCCCCHHHHHHHHHHHCCCEEEECC-----CCHHHHHHHHHHHHHCCCCEEEE
T ss_conf 68999479981783125454799983498999758-----99999999999999819998999
No 74
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=89.29 E-value=1.1 Score=22.93 Aligned_cols=81 Identities=12% Similarity=0.035 Sum_probs=54.2
Q ss_pred CCEEEEEE-ECCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 86179999-66814799999998589984499982557885518997048515542556788888389999999729999
Q gi|254781176|r 14 KPRITVFG-VGGGGGNAVNNMVSSGLQGVNFVVANTDAQALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAEECIDEI 92 (502)
Q Consensus 14 ~~~i~v~g-~gg~g~n~~~~~~~~~~~~~~~~~~ntd~~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~~~~i 92 (502)
+|+|.|.| -|.-|.+++..+.+.|.+ +..+++.-+...+.......++..|.- .+.+.+
T Consensus 4 m~tVlVtGatG~iG~~l~~~Ll~~g~~-~~v~~~~R~~~~~~~~~~~~~~~~~d~-------------------~~~~~~ 63 (253)
T 1xq6_A 4 LPTVLVTGASGRTGQIVYKKLKEGSDK-FVAKGLVRSAQGKEKIGGEADVFIGDI-------------------TDADSI 63 (253)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTTT-CEEEEEESCHHHHHHTTCCTTEEECCT-------------------TSHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCC-EEEEEECCCHHHHHHCCCCCEEEEEEC-------------------CCCHHH
T ss_conf 998999899778999999999967992-799997178778865558858999542-------------------440334
Q ss_pred HHHHCCCCEEEEEECCCCCCCC
Q ss_conf 9972699899998036766674
Q gi|254781176|r 93 TEMLDKTHMCFVTAGMGGGTGT 114 (502)
Q Consensus 93 ~~~~~~~~~~~~~ag~gggtgt 114 (502)
.+++++.|.||.+|+.......
T Consensus 64 ~~~~~~~d~vi~~a~~~~~~~~ 85 (253)
T 1xq6_A 64 NPAFQGIDALVILTSAVPKMKP 85 (253)
T ss_dssp HHHHTTCSEEEECCCCCCEECT
T ss_pred HHHHCCCCEEEEEEEECCCCCC
T ss_conf 4564286558998750256632
No 75
>2i2w_A Phosphoheptose isomerase; lipopolysaccharide biosynthesis; 1.95A {Escherichia coli} PDB: 2i22_A 1x94_A
Probab=89.03 E-value=1.1 Score=22.80 Aligned_cols=116 Identities=15% Similarity=0.170 Sum_probs=62.6
Q ss_pred CCEEEEEEECCCHHHHHHH---HH-HCCCCCCEEEEEC-CCHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 8617999966814799999---99-8589984499982-55788551899704851554255678888838999999972
Q gi|254781176|r 14 KPRITVFGVGGGGGNAVNN---MV-SSGLQGVNFVVAN-TDAQALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAEEC 88 (502)
Q Consensus 14 ~~~i~v~g~gg~g~n~~~~---~~-~~~~~~~~~~~~n-td~~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~ 88 (502)
.-||.++|.||.+..+.-. +. .......-+.++. +|...+. .++...+.+. -.
T Consensus 64 ggrI~~~GnGgSa~~A~h~a~e~~~~~~~~~~~~~~~~l~~~~~~t----------------a~~nd~~~~~------~f 121 (212)
T 2i2w_A 64 GGKVLSCGNGGSHCDAMHFAEELTGRYRENRPGYPAIAISDVSHIS----------------CVGNDFGFND------IF 121 (212)
T ss_dssp TCCEEEEESTHHHHHHHHHHHHHHHHHCTTSSSCSEEECCCTTCGG----------------GGSCCCSCSS------HH
T ss_pred CCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCEECCCCHHHHH----------------HHHCCCCHHH------HH
T ss_conf 9979999689525529989998718754344543212478878878----------------8871677899------99
Q ss_pred HHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999972699899998036766674078999999986498499995043000406788889999999998633354502
Q gi|254781176|r 89 IDEITEMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPFHFEGSRRMRVAESGIEALQETVDTLIVIP 168 (502)
Q Consensus 89 ~~~i~~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf~~eg~~r~~~a~~~~~~l~~~~d~~i~i~ 168 (502)
...++...+--|+|++..+=|. |--.--.++.||++|+.|+++...+ |. .|.+.+|-.|.+|
T Consensus 122 ~~ql~~~~~~gDvli~iS~SG~---s~nvi~al~~Ak~~G~~ti~lTg~~----g~-----------~l~~~~Di~I~vp 183 (212)
T 2i2w_A 122 SRYVEAVGREGDVLLGISTSGN---SANVIKAIAAAREKGMKVITLTGKD----GG-----------KMAGTADIEIRVP 183 (212)
T ss_dssp HHHHHHHCCTTCEEEEECSSSC---CHHHHHHHHHHHHHTCEEEEEEETT----CG-----------GGTTCSSEEEEEC
T ss_pred HHHHHHHCCCCCEEEEEECCCC---CCCHHHHHHHHHHCCCEEEEEECCC----CC-----------HHHHHCCEEEECC
T ss_conf 9999985789887999808999---8328999999998599899997788----73-----------3677399899869
Q ss_pred H
Q ss_conf 7
Q gi|254781176|r 169 N 169 (502)
Q Consensus 169 n 169 (502)
.
T Consensus 184 s 184 (212)
T 2i2w_A 184 H 184 (212)
T ss_dssp C
T ss_pred C
T ss_conf 9
No 76
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=89.01 E-value=0.22 Score=27.89 Aligned_cols=53 Identities=26% Similarity=0.394 Sum_probs=34.8
Q ss_pred CCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECC-CHHHHHHCCCCEEEEECC
Q ss_conf 86179999668147999999985899844999825-578855189970485155
Q gi|254781176|r 14 KPRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANT-DAQALMMSKAKQIIQLGS 66 (502)
Q Consensus 14 ~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~nt-d~~~l~~~~~~~~~~~g~ 66 (502)
+-||.|||.||-||.++-.|...|+..+.++=.+| +..+|+|.---.+=.+|+
T Consensus 17 ~skVlivGaGgiGce~lk~Lal~Gvg~i~iiD~D~Ie~SNLnRQfLf~~~dIG~ 70 (640)
T 1y8q_B 17 GGRVLVVGAGGIGCELLKNLVLTGFSHIDLIDLDTIDVSNLNRQFLFQKKHVGR 70 (640)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCCEEEEEECCBCCGGGGGTCTTCCGGGTTS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCEECCCCCCCCCCCCHHHCCC
T ss_conf 796899898889999999999848988999859994564547020649456788
No 77
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=88.79 E-value=0.74 Score=24.03 Aligned_cols=45 Identities=13% Similarity=0.267 Sum_probs=34.9
Q ss_pred CCHHHCCCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHH
Q ss_conf 884543861799996681479999999858998449998255788551
Q gi|254781176|r 8 MDITELKPRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDAQALMM 55 (502)
Q Consensus 8 ~~~~~~~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~~~l~~ 55 (502)
|..++.+-||.|||.|--|++....+...| .+.+..+.+...+..
T Consensus 2 m~~~~~~r~V~IIGlGlIG~Sla~aL~~~g---~~V~g~D~~~~~~~~ 46 (341)
T 3ktd_A 2 MTTKDISRPVCILGLGLIGGSLLRDLHAAN---HSVFGYNRSRSGAKS 46 (341)
T ss_dssp ----CCSSCEEEECCSHHHHHHHHHHHHTT---CCEEEECSCHHHHHH
T ss_pred CCCCCCCCCEEEEEECHHHHHHHHHHHHCC---CEEEEEECCHHHHHH
T ss_conf 987889981899974989999999998787---989999899999999
No 78
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=88.15 E-value=0.38 Score=26.23 Aligned_cols=42 Identities=24% Similarity=0.434 Sum_probs=31.6
Q ss_pred CCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEEC-CCHHHHHH
Q ss_conf 8617999966814799999998589984499982-55788551
Q gi|254781176|r 14 KPRITVFGVGGGGGNAVNNMVSSGLQGVNFVVAN-TDAQALMM 55 (502)
Q Consensus 14 ~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~n-td~~~l~~ 55 (502)
+-||.|||+||-||-++..+...|+..+.++=.+ -+..+|.+
T Consensus 40 ~~kVlvvG~GglG~ei~k~L~~~Gvg~i~liD~D~Ve~sNL~R 82 (434)
T 1tt5_B 40 TCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNR 82 (434)
T ss_dssp TCCEEEECSSTHHHHHHHHHHHTTCCCEEEEECCBCCGGGTTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHCC
T ss_conf 7969999978899999999998289879999799915101151
No 79
>3cvj_A Putative phosphoheptose isomerase; NP_244191.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 2.00A {Bacillus halodurans c-125}
Probab=88.13 E-value=0.98 Score=23.16 Aligned_cols=98 Identities=14% Similarity=0.155 Sum_probs=53.5
Q ss_pred HCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH---HHHH
Q ss_conf 2699899998036766674078999999986498499995043000406788889999999998633354502---7888
Q gi|254781176|r 96 LDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPFHFEGSRRMRVAESGIEALQETVDTLIVIP---NQNL 172 (502)
Q Consensus 96 ~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf~~eg~~r~~~a~~~~~~l~~~~d~~i~i~---n~~l 172 (502)
++--|+||+...=|. |-..--.++.||+.|+.||++...|-+-=.+.|. ..=.+|.+++|-+|-.+ .|-+
T Consensus 106 i~~~DvvI~iS~SG~---t~~vi~a~~~AK~~G~~vIaIT~~~~S~~~~~~h----~~g~~L~~~ad~~id~~~~~gda~ 178 (243)
T 3cvj_A 106 VTNKDVIMIISNSGR---NTVPVEMAIESRNIGAKVIAMTSMKHSQKVTSRH----KSGKKLYEYADVVLDNGAPVGDAG 178 (243)
T ss_dssp CCTTCEEEEECSSCC---SHHHHHHHHHHHHHTCEEEEEECHHHHHHSCCCS----TTSCCGGGGCSEEEECCCCTTSCC
T ss_pred CCCCCEEEEECCCCC---CHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCC----CCCCCHHHHCCCEEECCCCCCCCE
T ss_conf 999999999778999---9999999999998799499980887675543234----444625673676676677765430
Q ss_pred HHHC------CCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 7413------6653189997446799999988888
Q gi|254781176|r 173 FRIA------NDKTTFADAFSMADQVLYSGVSCIT 201 (502)
Q Consensus 173 ~~~~------~~~~~~~~af~~~d~~l~~~v~~i~ 201 (502)
+.+- .+ ++-.-+..++|.++...++-+.
T Consensus 179 ~~~~~~~~~~~~-tst~~~~~i~~~~~~~~~~~l~ 212 (243)
T 3cvj_A 179 FQIANSEIYSGA-TSDSIGCFLAQALIVETLHLLV 212 (243)
T ss_dssp EECSSSSCEECC-CHHHHHHHHHHHHHHHHHHHHH
T ss_pred EECCCCCCCCCC-HHHHHHHHHHHHHHHHHHHHHH
T ss_conf 111467767675-8899999999999999999999
No 80
>1j6u_A UDP-N-acetylmuramate-alanine ligase MURC; structural genomics, TM0231, JCSG, PSI, protein structure initiative; 2.30A {Thermotoga maritima} SCOP: c.5.1.1 c.59.1.1 c.72.2.1
Probab=87.91 E-value=1.3 Score=22.30 Aligned_cols=90 Identities=19% Similarity=0.142 Sum_probs=53.4
Q ss_pred CCCHHHCCCEEEEEEECCCHHHHHHHHHH-CCCCCCEEEEECCC----HHHHHHCCCCEEEEECCCCCCCCCCCCCHHHH
Q ss_conf 78845438617999966814799999998-58998449998255----78855189970485155425567888883899
Q gi|254781176|r 7 NMDITELKPRITVFGVGGGGGNAVNNMVS-SGLQGVNFVVANTD----AQALMMSKAKQIIQLGSGITEGLGAGSHPEVG 81 (502)
Q Consensus 7 ~~~~~~~~~~i~v~g~gg~g~n~~~~~~~-~~~~~~~~~~~ntd----~~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g 81 (502)
++++-..+-||..+|+||.|..++-++.. .|. +....+.. .+.|...- .++.+| .+|+
T Consensus 5 ~~~~~~~~mkih~iGigg~Gms~lA~~l~~~G~---~V~gsD~~~~~~~~~L~~~G--i~~~~g----------~~~~-- 67 (469)
T 1j6u_A 5 KIHHHHHHMKIHFVGIGGIGMSAVALHEFSNGN---DVYGSNIEETERTAYLRKLG--IPIFVP----------HSAD-- 67 (469)
T ss_dssp -------CCEEEEETTTSHHHHHHHHHHHHTTC---EEEEECSSCCHHHHHHHHTT--CCEESS----------CCTT--
T ss_pred CCCCCCCCCEEEEEEECHHHHHHHHHHHHHCCC---EEEEEECCCCHHHHHHHHCC--CEEECC----------CCHH--
T ss_conf 323146877799998869999999999996899---69998299998999999888--999889----------8978--
Q ss_pred HHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEE
Q ss_conf 999997299999972699899998036766674078999999986498499
Q gi|254781176|r 82 RAAAEECIDEITEMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTV 132 (502)
Q Consensus 82 ~~~a~~~~~~i~~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~ 132 (502)
.+.+.|+|++..|.- --.|.+ +.|++.|+-++
T Consensus 68 -------------~~~~~d~vV~SpgI~-----~~~p~l-~~a~~~gi~v~ 99 (469)
T 1j6u_A 68 -------------NWYDPDLVIKTPAVR-----DDNPEI-VRARMERVPIE 99 (469)
T ss_dssp -------------SCCCCSEEEECTTCC-----TTCHHH-HHHHHTTCCEE
T ss_pred -------------HCCCCCEEEECCCCC-----CCCHHH-HHHHHCCCCEE
T ss_conf -------------879998999889689-----888999-99998599687
No 81
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=85.53 E-value=1.7 Score=21.41 Aligned_cols=100 Identities=14% Similarity=0.212 Sum_probs=59.3
Q ss_pred CCEEEEEEE-CCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 861799996-6814799999998589984499982557885518997048515542556788888389999999729999
Q gi|254781176|r 14 KPRITVFGV-GGGGGNAVNNMVSSGLQGVNFVVANTDAQALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAEECIDEI 92 (502)
Q Consensus 14 ~~~i~v~g~-gg~g~n~~~~~~~~~~~~~~~~~~ntd~~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~~~~i 92 (502)
.-||.|+|- |+-|..++..+.+.|. +.+++--+...|.......++..|. + .+.+.+
T Consensus 4 m~KIlItGatG~iG~~l~~~Ll~~g~---~V~~l~R~~~~~~~~~~~~~~i~~D-~------------------~d~~~l 61 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRGF---EVTAVVRHPEKIKIENEHLKVKKAD-V------------------SSLDEV 61 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTTC---EEEEECSCGGGCCCCCTTEEEECCC-T------------------TCHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHHCCCCCCCEEEEECC-C------------------CCHHHH
T ss_conf 99999988998899999999997849---8999986847622246623776135-5------------------546668
Q ss_pred HHHHCCCCEEEEEECCCCCCCC------CHHHHHHHHHHHCCCEEEEEE
Q ss_conf 9972699899998036766674------078999999986498499995
Q gi|254781176|r 93 TEMLDKTHMCFVTAGMGGGTGT------GAAPIIAKIARNKGVLTVGVV 135 (502)
Q Consensus 93 ~~~~~~~~~~~~~ag~gggtgt------g~~p~ia~~a~~~~~~~~~~v 135 (502)
.+++++.|.|+.+++-+.+.-. .++.-+.+.++..|.-.+-++
T Consensus 62 ~~~~~~~d~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 110 (227)
T 3dhn_A 62 CEVCKGADAVISAFNPGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMV 110 (227)
T ss_dssp HHHHTTCSEEEECCCC------CCSHHHHHHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
T ss_conf 9886077511034145545058998877654899999998599789999
No 82
>3dzb_A Prephenate dehydrogenase; domain SWAP, PSI2, NYSGXRC, tyrosine biosynthesis, EC:1.3.12.-, structural genomics; 2.46A {Streptococcus thermophilus lmg 18311}
Probab=85.33 E-value=0.25 Score=27.53 Aligned_cols=41 Identities=17% Similarity=0.152 Sum_probs=33.5
Q ss_pred CCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHH
Q ss_conf 861799996681479999999858998449998255788551
Q gi|254781176|r 14 KPRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDAQALMM 55 (502)
Q Consensus 14 ~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~~~l~~ 55 (502)
+-||.|||.|--|+...-.+.+.+.. ++.++++.+.+.+..
T Consensus 5 ~k~I~IIG~GlmG~Sia~al~~~~~~-~~V~~~D~~~~~~~~ 45 (317)
T 3dzb_A 5 KKTIYIAGLGLIGGSLALGIKRDHPD-YEILGYNRSDYSRNI 45 (317)
T ss_dssp -CEEEESCCSHHHHHHHHHHHTTCTT-SEEEEECSCHHHHHH
T ss_pred CCEEEEEEECHHHHHHHHHHHHCCCC-CEEEEEECCHHHHHH
T ss_conf 88799992188999999999960999-889999699999999
No 83
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, protein structure initiative, midwest center for structural genomics; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=85.08 E-value=0.69 Score=24.27 Aligned_cols=25 Identities=12% Similarity=0.177 Sum_probs=18.5
Q ss_pred CEEEEEEECCCHHHHHHHHHHCCCC
Q ss_conf 6179999668147999999985899
Q gi|254781176|r 15 PRITVFGVGGGGGNAVNNMVSSGLQ 39 (502)
Q Consensus 15 ~~i~v~g~gg~g~n~~~~~~~~~~~ 39 (502)
-||.|||=|-.+.-++..+.+.|.+
T Consensus 8 mkIaViGgd~r~~~la~~L~~~G~~ 32 (300)
T 2rir_A 8 LKIAVIGGDARQLEIIRKLTEQQAD 32 (300)
T ss_dssp CEEEEESBCHHHHHHHHHHHHTTCE
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCE
T ss_conf 8899988888999999999978995
No 84
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=84.83 E-value=1.8 Score=21.19 Aligned_cols=100 Identities=25% Similarity=0.293 Sum_probs=67.4
Q ss_pred HHCCCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHCC--CCEEEEECCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 54386179999668147999999985899844999825578855189--9704851554255678888838999999972
Q gi|254781176|r 11 TELKPRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDAQALMMSK--AKQIIQLGSGITEGLGAGSHPEVGRAAAEEC 88 (502)
Q Consensus 11 ~~~~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~~~l~~~~--~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~ 88 (502)
+....+|-|+|.|.-|-.++..|.+.| .++++++.|...+.... .+..+..| -+.+|++
T Consensus 16 ~~~~~~IiI~G~g~~G~~ia~~L~~~g---~~vvvId~d~~~~~~l~~~~~~~~i~G--------D~~d~~~-------- 76 (155)
T 2g1u_A 16 KQKSKYIVIFGCGRLGSLIANLASSSG---HSVVVVDKNEYAFHRLNSEFSGFTVVG--------DAAEFET-------- 76 (155)
T ss_dssp -CCCCEEEEECCSHHHHHHHHHHHHTT---CEEEEEESCGGGGGGSCTTCCSEEEES--------CTTSHHH--------
T ss_pred HHCCCEEEEECCCHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHCCCCCEEEEC--------CCCCHHH--------
T ss_conf 415981999899899999999999789---979999468898443120334136977--------7600788--------
Q ss_pred HHHHHH-HHCCCCEEEEEECCCCCCCCCH-HHHHHHHHHHC-CCE-EEEEEECC
Q ss_conf 999999-7269989999803676667407-89999999864-984-99995043
Q gi|254781176|r 89 IDEITE-MLDKTHMCFVTAGMGGGTGTGA-APIIAKIARNK-GVL-TVGVVTKP 138 (502)
Q Consensus 89 ~~~i~~-~~~~~~~~~~~ag~gggtgtg~-~p~ia~~a~~~-~~~-~~~~v~~p 138 (502)
+++ -++.+++|+.+ |+.-. .-.++.+||++ +.. +|+.+.-|
T Consensus 77 ---L~~a~i~~a~~vI~~------t~dDe~Nl~~~l~ak~~~~~~~iIar~~~~ 121 (155)
T 2g1u_A 77 ---LKECGMEKADMVFAF------TNDDSTNFFISMNARYMFNVENVIARVYDP 121 (155)
T ss_dssp ---HHTTTGGGCSEEEEC------SSCHHHHHHHHHHHHHTSCCSEEEEECSSG
T ss_pred ---HHHCCHHHCCEEEEC------CCCHHHHHHHHHHHHHHCCCCEEEEEECCH
T ss_conf ---874182246899991------498499999999999987998399998888
No 85
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=84.49 E-value=1.3 Score=22.34 Aligned_cols=25 Identities=4% Similarity=0.134 Sum_probs=19.7
Q ss_pred CEEEEEEECCCHHHHHHHHHHCCCC
Q ss_conf 6179999668147999999985899
Q gi|254781176|r 15 PRITVFGVGGGGGNAVNNMVSSGLQ 39 (502)
Q Consensus 15 ~~i~v~g~gg~g~n~~~~~~~~~~~ 39 (502)
.||-|||=|-.+..++..+.+.|..
T Consensus 6 ~kiaViGgd~r~~~~~~~L~~~G~~ 30 (293)
T 3d4o_A 6 KHVVIIGGDARQLEIIRKLSTFDAK 30 (293)
T ss_dssp CEEEEECBCHHHHHHHHHHHHTTCE
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCE
T ss_conf 8899989887999999999978995
No 86
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=84.25 E-value=1 Score=22.97 Aligned_cols=14 Identities=21% Similarity=0.318 Sum_probs=8.5
Q ss_pred CCCCCEEEEEEECC
Q ss_conf 68863999853134
Q gi|254781176|r 291 DSEANIILGATFDE 304 (502)
Q Consensus 291 ~~~a~ii~G~~~d~ 304 (502)
-..+++++++..-+
T Consensus 253 ~~~~DivI~~~~~p 266 (401)
T 1x13_A 253 AKEVDIIVTTALIP 266 (401)
T ss_dssp HHHCSEEEECCCCT
T ss_pred CCCCCEEEEEEEEC
T ss_conf 05544388840006
No 87
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=83.98 E-value=1.1 Score=22.76 Aligned_cols=74 Identities=14% Similarity=0.159 Sum_probs=46.6
Q ss_pred EEEEEEE-CCCHHHHHHHHHHCCCCC----CEEEEECCC---------HHHHHHCCCC--EEEEECCCCCCCCCCCCCHH
Q ss_conf 1799996-681479999999858998----449998255---------7885518997--04851554255678888838
Q gi|254781176|r 16 RITVFGV-GGGGGNAVNNMVSSGLQG----VNFVVANTD---------AQALMMSKAK--QIIQLGSGITEGLGAGSHPE 79 (502)
Q Consensus 16 ~i~v~g~-gg~g~n~~~~~~~~~~~~----~~~~~~ntd---------~~~l~~~~~~--~~~~~g~~~~~g~g~g~~~~ 79 (502)
||.|+|= |+-|......+....+.+ .++..++.. +..|..+..+ ..+.+.
T Consensus 5 KV~IiGAaG~iG~~la~~l~~~~l~~~~~~~~L~L~Di~~~~~~~~G~a~Dl~~~~~~~~~~~~~~-------------- 70 (333)
T 5mdh_A 5 RVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIAT-------------- 70 (333)
T ss_dssp EEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEE--------------
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCEEEE--------------
T ss_conf 999989986789999999971400289986389997787860067899999985243456865981--------------
Q ss_pred HHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCC
Q ss_conf 9999999729999997269989999803676667
Q gi|254781176|r 80 VGRAAAEECIDEITEMLDKTHMCFVTAGMGGGTG 113 (502)
Q Consensus 80 ~g~~~a~~~~~~i~~~~~~~~~~~~~ag~gggtg 113 (502)
....+.++++|+|+|+||.--..|
T Consensus 71 ----------~~~~~~l~~advVVi~aG~~rkpg 94 (333)
T 5mdh_A 71 ----------DKEEIAFKDLDVAILVGSMPRRDG 94 (333)
T ss_dssp ----------SCHHHHTTTCSEEEECCSCCCCTT
T ss_pred ----------CCCHHHHCCCCEEEECCCCCCCCC
T ss_conf ----------682999679989998899889989
No 88
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 2.50A {Geobacter metallireducens gs-15}
Probab=83.83 E-value=2 Score=20.89 Aligned_cols=39 Identities=28% Similarity=0.371 Sum_probs=30.1
Q ss_pred EEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHC
Q ss_conf 17999966814799999998589984499982557885518
Q gi|254781176|r 16 RITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDAQALMMS 56 (502)
Q Consensus 16 ~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~~~l~~~ 56 (502)
||.|+|.|.-|+-.--+|.+.|.. |.|++ ....+++...
T Consensus 4 kI~ViGaGaiG~~~a~~L~~aG~~-Vtlv~-R~~~~ai~~~ 42 (312)
T 3hn2_A 4 RIAIVGAGALGLYYGALLQRSGED-VHFLL-RRDYEAIAGN 42 (312)
T ss_dssp CEEEECCSTTHHHHHHHHHHTSCC-EEEEC-STTHHHHHHT
T ss_pred EEEEECCCHHHHHHHHHHHHCCCC-EEEEE-CCHHHHHHHC
T ss_conf 899999289999999999836995-69996-8659999978
No 89
>2hqb_A Transcriptional activator of COMK gene; berkeley structure genomics center target 1957B, structural genomics, PSI; 2.70A {Bacillus halodurans}
Probab=83.27 E-value=2 Score=20.84 Aligned_cols=32 Identities=22% Similarity=0.376 Sum_probs=21.2
Q ss_pred HHHHHHH-CCCCEEEEEECCCCCCCCCHHHHHHHHHHHCC
Q ss_conf 9999972-69989999803676667407899999998649
Q gi|254781176|r 90 DEITEML-DKTHMCFVTAGMGGGTGTGAAPIIAKIARNKG 128 (502)
Q Consensus 90 ~~i~~~~-~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~ 128 (502)
..|+++. +|.|++| ++|.+-...+.++|++.-
T Consensus 54 ~~i~~~a~~g~dlIi-------~~g~~~~~~~~~vA~~~P 86 (296)
T 2hqb_A 54 RRIKELVDGGVNLIF-------GHGHAFAEYFSTIHNQYP 86 (296)
T ss_dssp HHHHHHHHTTCCEEE-------ECSTHHHHHHHTTTTSCT
T ss_pred HHHHHHHHCCCCEEE-------ECCCCCHHHHHHHHHHCC
T ss_conf 999999987999999-------827422269999999889
No 90
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=82.86 E-value=0.99 Score=23.11 Aligned_cols=179 Identities=14% Similarity=0.194 Sum_probs=82.9
Q ss_pred EEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHCC----------------CCEEEEECCCCCCCCCCCCCHH
Q ss_conf 179999668147999999985899844999825578855189----------------9704851554255678888838
Q gi|254781176|r 16 RITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDAQALMMSK----------------AKQIIQLGSGITEGLGAGSHPE 79 (502)
Q Consensus 16 ~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~~~l~~~~----------------~~~~~~~g~~~~~g~g~g~~~~ 79 (502)
||-|||+|-.|.....++.+.|. +.++.|-+.+...... ++.-| += + .+++
T Consensus 7 kIgvIGlG~MG~~~a~~L~~~G~---~V~~~d~~~~~~~~l~~~g~~~~~s~~e~~~~~divi-~~--v-------~~~~ 73 (299)
T 1vpd_A 7 KVGFIGLGIMGKPMSKNLLKAGY---SLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVII-TM--L-------PNSP 73 (299)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTC---EEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEE-EC--C-------SSHH
T ss_pred EEEEEEEHHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHCCCEECCCHHHHHHCCCEEE-EE--C-------CCHH
T ss_conf 28898308988999999997899---6999809999999999859945489999984799899-97--5-------9878
Q ss_pred HHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC-CHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHH--------
Q ss_conf 99999997299999972699899998036766674-078999999986498499995043000406788889--------
Q gi|254781176|r 80 VGRAAAEECIDEITEMLDKTHMCFVTAGMGGGTGT-GAAPIIAKIARNKGVLTVGVVTKPFHFEGSRRMRVA-------- 150 (502)
Q Consensus 80 ~g~~~a~~~~~~i~~~~~~~~~~~~~ag~gggtgt-g~~p~ia~~a~~~~~~~~~~v~~pf~~eg~~r~~~a-------- 150 (502)
.-+... ...+.+.+.+..-.+++.+ +|.+ ..+--+++..++.|+ .++..|.. =|+......
T Consensus 74 ~v~~v~-~~~~~i~~~~~~g~iiid~-----sT~~p~~~~~~~~~~~~~G~---~~vd~pv~-gg~~~a~~g~l~i~~gg 143 (299)
T 1vpd_A 74 HVKEVA-LGENGIIEGAKPGTVLIDM-----SSIAPLASREISDALKAKGV---EMLDAPVS-GGEPKAIDGTLSVMVGG 143 (299)
T ss_dssp HHHHHH-HSTTCHHHHCCTTCEEEEC-----SCCCHHHHHHHHHHHHTTTC---EEEECCEE-SHHHHHHHTCEEEEEES
T ss_pred HHHHHH-HCCHHHHHCCCCCCEEEEC-----CCCCHHHHHHHHHHHHHCCC---EEECCCCC-CCCHHHHCCCEEEEEEC
T ss_conf 999999-5824687349999989989-----98976899999999997699---58777885-88036634971799937
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH-HHHHHHHHHCCCCCCCCHHHHHHHHCC
Q ss_conf -9999999986333545027888741366531899974467999999-888887651665555898787876415
Q gi|254781176|r 151 -ESGIEALQETVDTLIVIPNQNLFRIANDKTTFADAFSMADQVLYSG-VSCITDLMIKEGLINLDFADVRSVMRN 223 (502)
Q Consensus 151 -~~~~~~l~~~~d~~i~i~n~~l~~~~~~~~~~~~af~~~d~~l~~~-v~~i~~~i~~~g~in~df~d~~~v~~~ 223 (502)
.+-.++.+.....+ . .+.+. .+ ..+-..+++++...+..+ +.++.+.+..---..+|...+..+++.
T Consensus 144 ~~~~~~~~~~~l~~~---~-~~~~~-~G-~~G~a~~~Kl~~N~~~~~~~~~~~E~~~la~~~Gi~~~~~~~~i~~ 212 (299)
T 1vpd_A 144 DKAIFDKYYDLMKAM---A-GSVVH-TG-DIGAGNVTKLANQVIVALNIAAMSEALTLATKAGVNPDLVYQAIRG 212 (299)
T ss_dssp CHHHHHHHHHHHHTT---E-EEEEE-EE-STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHH---C-CCCEE-CC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHC
T ss_conf 588889999999997---2-88565-39-9557489999999999999999999999999829698999999963
No 91
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, cytoplasm, oxidoreductase, phospholipid biosynthesis, structural genomics; HET: EPE; 2.10A {Coxiella burnetii rsa 493}
Probab=82.65 E-value=0.76 Score=23.97 Aligned_cols=56 Identities=14% Similarity=0.166 Sum_probs=34.9
Q ss_pred HCCCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCH-HHHHHCCCCEEEEECCCC
Q ss_conf 438617999966814799999998589984499982557-885518997048515542
Q gi|254781176|r 12 ELKPRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDA-QALMMSKAKQIIQLGSGI 68 (502)
Q Consensus 12 ~~~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~-~~l~~~~~~~~~~~g~~~ 68 (502)
..|-||.|+|-|--|+-.-..+.+.+- .|.++..+.|. ..+.......+.+-|.++
T Consensus 27 ~~k~kI~ViGaGawGtAlA~~La~ng~-~V~l~~r~~~~~~~I~~~~~n~~ylp~i~l 83 (356)
T 3k96_A 27 PFKHPIAILGAGSWGTALALVLARKGQ-KVRLWSYESDHVDEMQAEGVNNRYLPNYPF 83 (356)
T ss_dssp CCCSCEEEECCSHHHHHHHHHHHTTTC-CEEEECSCHHHHHHHHHHSSBTTTBTTCCC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEEECHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 789789998969999999999997899-789998189999999973989777998959
No 92
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehydrogenase, reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=82.30 E-value=2.3 Score=20.47 Aligned_cols=102 Identities=17% Similarity=0.290 Sum_probs=66.6
Q ss_pred CCCEEEEEEE-CCCHHHHHHHHHHCCCCCCEEEEECCCH---HHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 3861799996-6814799999998589984499982557---88551899704851554255678888838999999972
Q gi|254781176|r 13 LKPRITVFGV-GGGGGNAVNNMVSSGLQGVNFVVANTDA---QALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAEEC 88 (502)
Q Consensus 13 ~~~~i~v~g~-gg~g~n~~~~~~~~~~~~~~~~~~ntd~---~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~ 88 (502)
.|..|.|+|- |.-|..++..+...|.+ |..++=|+.. +.|.. .....+..|. + .||
T Consensus 4 ~kktIlVtGaTG~iG~~lv~~Ll~~G~~-V~~l~R~~~~~~~~~l~~-~~gv~~~~gD-~-------~d~---------- 63 (352)
T 1xgk_A 4 QKKTIAVVGATGRQGASLIRVAAAVGHH-VRAQVHSLKGLIAEELQA-IPNVTLFQGP-L-------LNN---------- 63 (352)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHTTCC-EEEEESCSCSHHHHHHHT-STTEEEEESC-C-------TTC----------
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEECCCCCCCHHHCCC-CCCCEEEEEE-C-------CCC----------
T ss_conf 9998999899718999999999958995-999977853001234011-4898899975-8-------995----------
Q ss_pred HHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEE
Q ss_conf 9999997269989999803676667407899999998649849999
Q gi|254781176|r 89 IDEITEMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGV 134 (502)
Q Consensus 89 ~~~i~~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~ 134 (502)
.+.++..+.+.|.||.+......+-...+--+.+.|++.|...+-+
T Consensus 64 ~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~aa~~~g~~~~~~ 109 (352)
T 1xgk_A 64 VPLMDTLFEGAHLAFINTTSQAGDEIAIGKDLADAAKRAGTIQHYI 109 (352)
T ss_dssp HHHHHHHHTTCSEEEECCCSTTSCHHHHHHHHHHHHHHHSCCSEEE
T ss_pred HHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEEEE
T ss_conf 8899998758858997467211123467899999999809960999
No 93
>3ktn_A Carbohydrate kinase, PFKB family; PFKB family,ribokianse,2-keto-3-deoxygluconate kinase,PSI-II, NYSGXRC,, structural genomics; 2.26A {Enterococcus faecalis}
Probab=82.23 E-value=2.3 Score=20.46 Aligned_cols=150 Identities=11% Similarity=0.064 Sum_probs=73.5
Q ss_pred EEEECCCHHHHHHHHHHCCCCCCEEEE-ECCCH------HHHHHCCCCE-------------EEEECCC---CCCCCCCC
Q ss_conf 999668147999999985899844999-82557------8855189970-------------4851554---25567888
Q gi|254781176|r 19 VFGVGGGGGNAVNNMVSSGLQGVNFVV-ANTDA------QALMMSKAKQ-------------IIQLGSG---ITEGLGAG 75 (502)
Q Consensus 19 v~g~gg~g~n~~~~~~~~~~~~~~~~~-~ntd~------~~l~~~~~~~-------------~~~~g~~---~~~g~g~g 75 (502)
-.-+||+|.|+.-.+.+.|.. +.|+. +-.|. ++|....+.. .+.+... .+-....+
T Consensus 30 ~~~~GG~a~NvA~~la~lG~~-~~~i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (346)
T 3ktn_A 30 RMNFVGTGVNLLANLAHFQLE-TALITKLPANRLGEAGKAALRKLGISDQWVGEKGDHIGSFFAEMGYGIRPTQVTYQNR 108 (346)
T ss_dssp EEEEECHHHHHHHHHHHTTCE-EEEEEEECSSHHHHHHHHHHHHTTCBCTTEEECCSCCEEEEEECCBTTBCCEEEECCC
T ss_pred EEECCCHHHHHHHHHHHCCCC-EEEEEEECCCHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEEECCCCCEEEEEECC
T ss_conf 995596699999999987998-6999995797799999999986489863156405887148999943998359998404
Q ss_pred CCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHH---HHHHHHCCCEEEEEEECCCCCCCHHHHHHHHH
Q ss_conf 883899999997299999972699899998036766674078999---99998649849999504300040678888999
Q gi|254781176|r 76 SHPEVGRAAAEECIDEITEMLDKTHMCFVTAGMGGGTGTGAAPII---AKIARNKGVLTVGVVTKPFHFEGSRRMRVAES 152 (502)
Q Consensus 76 ~~~~~g~~~a~~~~~~i~~~~~~~~~~~~~ag~gggtgtg~~p~i---a~~a~~~~~~~~~~v~~pf~~eg~~r~~~a~~ 152 (502)
..... .............+.+++++.+.. ...........++ .+.++..+............+=.........+
T Consensus 109 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (346)
T 3ktn_A 109 HQSAF--GISEAKDYDFEAFLAEVDMVHICG-ISLSLTEKTRDAALILAQKAHAYQKKVCFDFNYRPSLNTANSALFMRQ 185 (346)
T ss_dssp TTSTT--TTCCGGGSCHHHHHTTCSEEEECT-HHHHHCHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGCCHHHHHHHHH
T ss_pred CCCHH--CCCCCCCCCHHHHHCCCCEEEECC-CCHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHH
T ss_conf 31100--006810026566753789999826-304203447999999999865412322233455652100011387899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999998633354502788874
Q gi|254781176|r 153 GIEALQETVDTLIVIPNQNLFR 174 (502)
Q Consensus 153 ~~~~l~~~~d~~i~i~n~~l~~ 174 (502)
.+..|..++|.++ +|..-++
T Consensus 186 ~~~~l~~~~d~l~--~n~~E~~ 205 (346)
T 3ktn_A 186 QYERILPYCDIVF--GSRRDLV 205 (346)
T ss_dssp HHHHHGGGCSEEE--CCHHHHH
T ss_pred HHHHHHHHCCCCC--CCHHHHH
T ss_conf 9999886096023--8999999
No 94
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus VF5} SCOP: a.100.1.12 c.2.1.6
Probab=82.08 E-value=1.5 Score=21.86 Aligned_cols=154 Identities=17% Similarity=0.275 Sum_probs=82.0
Q ss_pred EEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHCCCC------------------EEEEECCCCCCCCCCCCC
Q ss_conf 17999966814799999998589984499982557885518997------------------048515542556788888
Q gi|254781176|r 16 RITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDAQALMMSKAK------------------QIIQLGSGITEGLGAGSH 77 (502)
Q Consensus 16 ~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~~~l~~~~~~------------------~~~~~g~~~~~g~g~g~~ 77 (502)
||.|||.|--|....-.+.+.|.. ++.++++.|..++.+.... .-|.|..
T Consensus 3 ~I~IiG~G~mG~sla~~L~~~g~~-~~V~~~d~~~~~~~~a~~~g~id~~~~~~~~~~~~~~dlvila~----------- 70 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFK-GKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSS----------- 70 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCC-SEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEECS-----------
T ss_pred EEEEECCCHHHHHHHHHHHHCCCC-CEEEEEECCHHHHHHHHHCCCCCEECCCHHHHCCCCCCEEEECC-----------
T ss_conf 899992398999999999816998-48999989999999999869976104635553145788899836-----------
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCC--------------CCCC
Q ss_conf 38999999972999999726998999980367666740789999999864984999950430--------------0040
Q gi|254781176|r 78 PEVGRAAAEECIDEITEMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPF--------------HFEG 143 (502)
Q Consensus 78 ~~~g~~~a~~~~~~i~~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf--------------~~eg 143 (502)
| -.+..+-.++|...+...-+|.-+ +|--.+++..+.+..+.--|+. -|. -|+|
T Consensus 71 p---~~~~~~~~~~l~~~~~~~~ii~Dv-------~Svk~~~~~~~~~~~~~~fV~~--HPm~G~e~~g~~~a~~~lf~~ 138 (281)
T 2g5c_A 71 P---VRTFREIAKKLSYILSEDATVTDQ-------GSVKGKLVYDLENILGKRFVGG--HPIAGTEKSGVEYSLDNLYEG 138 (281)
T ss_dssp C---HHHHHHHHHHHHHHSCTTCEEEEC-------CSCCTHHHHHHHHHHGGGEECE--EEECCCSCCSGGGCCSSTTTT
T ss_pred C---CHHHHHHHHHHHHCCCCCCEEECC-------CCHHHHHHHHHHHHCCCCEEEC--CCCCCCCCCCCCCCCCCCCCC
T ss_conf 8---044321565553102466213233-------4407999999986368856732--655576667722234440038
Q ss_pred --------HHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHCCCCCHHHHHHHHHHHHHH
Q ss_conf --------678888999999999863335450----278887413665318999744679999
Q gi|254781176|r 144 --------SRRMRVAESGIEALQETVDTLIVI----PNQNLFRIANDKTTFADAFSMADQVLY 194 (502)
Q Consensus 144 --------~~r~~~a~~~~~~l~~~~d~~i~i----~n~~l~~~~~~~~~~~~af~~~d~~l~ 194 (502)
..+...+.+-+.++-+.+-+.++. .-|+++-...- +|..-||.++..+..
T Consensus 139 ~~~i~~~~~~~~~~~~~~v~~~~~~~G~~~~~~~~e~HD~~~A~~sh-lph~~a~al~~~~~~ 200 (281)
T 2g5c_A 139 KKVILTPTKKTDKKRLKLVKRVWEDVGGVVEYMSPELHDYVFGVVSH-LPHAVAFALVDTLIH 200 (281)
T ss_dssp CEEEECCCSSSCHHHHHHHHHHHHHTTCEEEECCHHHHHHHHHHHTH-HHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
T ss_conf 54898458889899999999999971996999577998889988823-999999999999983
No 95
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=81.53 E-value=0.74 Score=24.07 Aligned_cols=187 Identities=11% Similarity=0.118 Sum_probs=87.3
Q ss_pred HHHCCCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHC----------------CCCEEEEECCCCCCCCC
Q ss_conf 45438617999966814799999998589984499982557885518----------------99704851554255678
Q gi|254781176|r 10 ITELKPRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDAQALMMS----------------KAKQIIQLGSGITEGLG 73 (502)
Q Consensus 10 ~~~~~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~~~l~~~----------------~~~~~~~~g~~~~~g~g 73 (502)
+..-.+||-|||+|-.|.....++.+.|.. ..+.|.+...+... .++.-+.. .
T Consensus 26 ~~~~~~KIg~IGlG~MG~~mA~~L~k~G~~---V~~~d~~~~k~~~l~~~Ga~~~~s~~e~~~~adiii~~-v------- 94 (316)
T 2uyy_A 26 ITPTDKKIGFLGLGLMGSGIVSNLLKMGHT---VTVWNRTAEKCDLFIQEGARLGRTPAEVVSTCDITFAC-V------- 94 (316)
T ss_dssp CCCCSSCEEEECCSHHHHHHHHHHHHTTCC---EEEECSSGGGGHHHHHTTCEECSCHHHHHHHCSEEEEC-C-------
T ss_pred CCCCCCEEEEECCHHHHHHHHHHHHHCCCE---EEEECCCHHHHHHHHHCCCEECCCHHHHHHCCCEEEEE-C-------
T ss_conf 799999699983179899999999978996---99983999999999985994659999998459859997-2-------
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHH---
Q ss_conf 88883899999997299999972699899998036766674078999999986498499995043000406788889---
Q gi|254781176|r 74 AGSHPEVGRAAAEECIDEITEMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPFHFEGSRRMRVA--- 150 (502)
Q Consensus 74 ~g~~~~~g~~~a~~~~~~i~~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf~~eg~~r~~~a--- 150 (502)
.+|..-+.. ....+.+.+.+..-.++..+ ..+....+.-+++.+++.|+- +|-.|+.- |+...+..
T Consensus 95 --~~~~a~~~v-~~~~~~l~~~~~~g~iiid~----sT~~p~~~~~~~~~l~~~g~~---~vdapv~g-~~~~a~~g~l~ 163 (316)
T 2uyy_A 95 --SDPKAAKDL-VLGPSGVLQGIRPGKCYVDM----STVDADTVTELAQVIVSRGGR---FLEAPVSG-NQQLSNDGMLV 163 (316)
T ss_dssp --SSHHHHHHH-HHSTTCGGGGCCTTCEEEEC----SCCCHHHHHHHHHHHHHTTCE---EEECCEES-CHHHHHHTCEE
T ss_pred --CCCHHHHHH-HHCCCHHHHHCCCCCEEEEC----CCCCHHHHHHHHHHHHHCCCC---EEECCCCC-CCCCCCCCCEE
T ss_conf --673667999-63540576408899889955----788767799999999975993---77257778-80405677257
Q ss_pred ------HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH-HHHHHHHHHCCCCCCCCHHHHHHHHCC
Q ss_conf ------9999999986333545027888741366531899974467999999-888887651665555898787876415
Q gi|254781176|r 151 ------ESGIEALQETVDTLIVIPNQNLFRIANDKTTFADAFSMADQVLYSG-VSCITDLMIKEGLINLDFADVRSVMRN 223 (502)
Q Consensus 151 ------~~~~~~l~~~~d~~i~i~n~~l~~~~~~~~~~~~af~~~d~~l~~~-v~~i~~~i~~~g~in~df~d~~~v~~~ 223 (502)
.+..++++....++ ..+.+. .++ .+-..+++++...+..+ +-.+.+.+..---..||...+..+++.
T Consensus 164 ~~~gG~~~~~~~~~~il~~~----~~~~~~-~G~-~G~a~~~Kl~~N~~~~~~~~~~~Ea~~la~~~Gid~~~~~~~l~~ 237 (316)
T 2uyy_A 164 ILAAGDRGLYEDCSSCFQAM----GKTSFF-LGE-VGNAAKMMLIVNMVQGSFMATIAEGLTLAQVTGQSQQTLLDILNQ 237 (316)
T ss_dssp EEEEECHHHHHHTHHHHHHH----EEEEEE-CSS-TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred EECCCCHHHHHHHCHHHHHH----CCEEEE-ECC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
T ss_conf 64488679988622167751----582799-438-654378999998999999999999999999859799999999981
Q ss_pred C
Q ss_conf 8
Q gi|254781176|r 224 M 224 (502)
Q Consensus 224 ~ 224 (502)
+
T Consensus 238 ~ 238 (316)
T 2uyy_A 238 G 238 (316)
T ss_dssp S
T ss_pred C
T ss_conf 7
No 96
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein ligase, unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=81.06 E-value=2.5 Score=20.17 Aligned_cols=97 Identities=13% Similarity=0.187 Sum_probs=54.8
Q ss_pred EEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCC------HHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 1799996681479999999858998449998255------7885518997048515542556788888389999999729
Q gi|254781176|r 16 RITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTD------AQALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAEECI 89 (502)
Q Consensus 16 ~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd------~~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~~ 89 (502)
||.|||.|.-|..+...+...++.. +++.++.+ +..|.....+.... .+++
T Consensus 16 KI~IiGaG~VG~~~A~~l~~~~l~~-el~L~Di~~~~~g~a~Dl~~~~~~~~~~-----------~~d~----------- 72 (303)
T 2i6t_A 16 KITVVGGGELGIACTLAISAKGIAD-RLVLLDLSEGTKGATMDLEIFNLPNVEI-----------SKDL----------- 72 (303)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCS-EEEEECCC-----CHHHHHHHTCTTEEE-----------ESCG-----------
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCC-EEEEEECCCCHHHHHHHHHCCCCCCEEE-----------CCCH-----------
T ss_conf 5999997989999999998479998-7999979986366886201568997442-----------5877-----------
Q ss_pred HHHHHHHCCCCEEEEEECCCCCCCCC-------HHHHHHHHHHHC---C-CEEEEEEECCCC
Q ss_conf 99999726998999980367666740-------789999999864---9-849999504300
Q gi|254781176|r 90 DEITEMLDKTHMCFVTAGMGGGTGTG-------AAPIIAKIARNK---G-VLTVGVVTKPFH 140 (502)
Q Consensus 90 ~~i~~~~~~~~~~~~~ag~gggtgtg-------~~p~ia~~a~~~---~-~~~~~~v~~pf~ 140 (502)
+.+.++|+|+|||| -.+.|.- -+.++..+++.. + --.+-|||=|-+
T Consensus 73 ----~~~~~sdvvvitag-~rk~g~tR~dll~~N~~I~~~~~~~i~~~~p~~ivivvsNPvd 129 (303)
T 2i6t_A 73 ----SASAHSKVVIFTVN-SLGSSQSYLDVVQSNVDMFRALVPALGHYSQHSVLLVASQPVE 129 (303)
T ss_dssp ----GGGTTCSEEEECCC-C----CCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEECSSSHH
T ss_pred ----HHHCCCCEEEEECC-CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCH
T ss_conf ----77459848997068-8999988889988769999999998622599739999179503
No 97
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=79.58 E-value=2.8 Score=19.83 Aligned_cols=100 Identities=12% Similarity=0.091 Sum_probs=60.5
Q ss_pred EEEEEEE-CCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 1799996-681479999999858998449998255788551899704851554255678888838999999972999999
Q gi|254781176|r 16 RITVFGV-GGGGGNAVNNMVSSGLQGVNFVVANTDAQALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAEECIDEITE 94 (502)
Q Consensus 16 ~i~v~g~-gg~g~n~~~~~~~~~~~~~~~~~~ntd~~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~~~~i~~ 94 (502)
||.|+|- |..|..++..+...| .+.+++.-+...+..... .++.. +.. . -+.+.+.+
T Consensus 2 kVlVtGatG~iG~~lv~~Ll~~g---~~V~~~~R~~~~~~~~~~-~~~~~------~d~--~----------~~~~~l~~ 59 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTD---YQIYAGARKVEQVPQYNN-VKAVH------FDV--D----------WTPEEMAK 59 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSS---CEEEEEESSGGGSCCCTT-EEEEE------CCT--T----------SCHHHHHT
T ss_pred EEEEECCCCHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHC-CCCCC------CCC--C----------CCHHHHHH
T ss_conf 39999999989999999999783---989999888788244315-52000------001--1----------20122334
Q ss_pred HHCCCCEEEEEECCCCCCCC----CHHHHHHHHHHHCCCEEEEEEEC
Q ss_conf 72699899998036766674----07899999998649849999504
Q gi|254781176|r 95 MLDKTHMCFVTAGMGGGTGT----GAAPIIAKIARNKGVLTVGVVTK 137 (502)
Q Consensus 95 ~~~~~~~~~~~ag~gggtgt----g~~p~ia~~a~~~~~~~~~~v~~ 137 (502)
.+.+.|.||.++|.++-..- -.+--+.+.|+..|+--+-+++.
T Consensus 60 ~~~~~d~Vi~~~~~~~~~~~~~~~~~~~~~~~aa~~~~v~~~i~iSs 106 (219)
T 3dqp_A 60 QLHGMDAIINVSGSGGKSLLKVDLYGAVKLMQAAEKAEVKRFILLST 106 (219)
T ss_dssp TTTTCSEEEECCCCTTSSCCCCCCHHHHHHHHHHHHTTCCEEEEECC
T ss_pred HHCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEE
T ss_conf 30586079986101233232321210168999877436660999975
No 98
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoreductase, structural genomics consortium; HET: NAP; 2.30A {Plasmodium falciparum 3D7}
Probab=79.45 E-value=2.8 Score=19.80 Aligned_cols=187 Identities=12% Similarity=0.232 Sum_probs=98.1
Q ss_pred EEEEEEECCCHHHHHHHHHHCCCC-CCEEEEECCCH-----------HHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHH
Q ss_conf 179999668147999999985899-84499982557-----------885518997048515542556788888389999
Q gi|254781176|r 16 RITVFGVGGGGGNAVNNMVSSGLQ-GVNFVVANTDA-----------QALMMSKAKQIIQLGSGITEGLGAGSHPEVGRA 83 (502)
Q Consensus 16 ~i~v~g~gg~g~n~~~~~~~~~~~-~~~~~~~ntd~-----------~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~ 83 (502)
||-+||.|.-|.-.+..++..+.. .-++++.+... +.+.. .++ -|.|..+ |..
T Consensus 6 kIgfIG~G~Mg~Ai~~gl~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~d-vIiLaVk----------P~~--- 70 (262)
T 2rcy_A 6 KLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKKNTTLNYMSSNEELAR-HCD-IIVCAVK----------PDI--- 70 (262)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCCSSSSEECSCHHHHHH-HCS-EEEECSC----------TTT---
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCCHHHEEEECCCHHHCCCEEECCHHHHHH-HCC-CEECCCC----------CCC---
T ss_conf 8999886899999999999779998565688687746438745567899986-187-5631679----------752---
Q ss_pred HHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCC-----------CCCHHHHHHHHH
Q ss_conf 999729999997269989999803676667407899999998649849999504300-----------040678888999
Q gi|254781176|r 84 AAEECIDEITEMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPFH-----------FEGSRRMRVAES 152 (502)
Q Consensus 84 ~a~~~~~~i~~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf~-----------~eg~~r~~~a~~ 152 (502)
..+-..+|+..+.+.-+|=++||. -++++.+-.+--+--+-+||-- +-+........+
T Consensus 71 -~~~vl~~i~~~~~~~~vISi~AGi----------~~~~l~~~l~~~~~ivR~MPN~~~~~g~g~t~~~~~~~~~~~~~~ 139 (262)
T 2rcy_A 71 -AGSVLNNIKPYLSSKLLISICGGL----------NIGKLEEMVGSENKIVWVMPNTPCLVGEGSFIYCSNKNVNSTDKK 139 (262)
T ss_dssp -HHHHHHHSGGGCTTCEEEECCSSC----------CHHHHHHHHCTTSEEEEEECCGGGGGTCEEEEEEECTTCCHHHHH
T ss_pred -HHHHHHHHHHHHCCCEEEEECCCC----------CHHHHHHHCCCCCCCEEECCCHHHHHCCCCCEEECCCCCCHHHHH
T ss_conf -123237777540341588733654----------399998411343300042565678851787400058755799999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH----CCCCCH----HHHHH-----------HHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 99999986333545027888741----366531----89997-----------446799999988888765166555589
Q gi|254781176|r 153 GIEALQETVDTLIVIPNQNLFRI----ANDKTT----FADAF-----------SMADQVLYSGVSCITDLMIKEGLINLD 213 (502)
Q Consensus 153 ~~~~l~~~~d~~i~i~n~~l~~~----~~~~~~----~~~af-----------~~~d~~l~~~v~~i~~~i~~~g~in~d 213 (502)
-+..|-..+-.++.++.+. ++. .+--.. +.++| ..|-++..+.+.|-..++.+.+ .+
T Consensus 140 ~v~~lf~~~G~~~~v~ee~-~d~~tal~gsgpA~~~~~~ea~~~~~~~~G~~~~~a~~l~~~~~~G~~~l~~~~~---~~ 215 (262)
T 2rcy_A 140 YVNDIFNSCGIIHEIKEKD-MDIATAISGCGPAYVYLFIESLIDAGVKNGLSRELSKNLVLQTIKGSVEMVKKSD---QP 215 (262)
T ss_dssp HHHHHHHTSEEEEECCGGG-HHHHHHHTTSHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHCS---SC
T ss_pred HHHHHHHHCCCCCCCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC---CC
T ss_conf 9999996368401468899-8899999750799999999999999987599789999999999997899885179---99
Q ss_pred HHHHH-HHHCCCCEEEEEEE
Q ss_conf 87878-76415865899876
Q gi|254781176|r 214 FADVR-SVMRNMGRAMMGTG 232 (502)
Q Consensus 214 f~d~~-~v~~~~g~a~~g~g 232 (502)
|++++ .|.+-+|.+.=|.-
T Consensus 216 ~~~l~~~V~SpgGtT~~gl~ 235 (262)
T 2rcy_A 216 VQQLKDNIVSPGGITAVGLY 235 (262)
T ss_dssp HHHHHHHHCCTTSHHHHHHH
T ss_pred HHHHHHHCCCCCHHHHHHHH
T ss_conf 99999856698663999999
No 99
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, structural genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2
Probab=79.26 E-value=2.5 Score=20.17 Aligned_cols=47 Identities=17% Similarity=0.195 Sum_probs=31.2
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEE
Q ss_conf 899998875270100022455537899961688889999999999999741688639998
Q gi|254781176|r 240 GIQAAEAAVANPLLDEASMKGSQGLLISITGGSDLTLFEVDEAATRIREEVDSEANIILG 299 (502)
Q Consensus 240 ~~~a~~~a~~~pll~~~~~~~a~~~l~~i~~~~~~~l~e~~~~~~~i~~~~~~~a~ii~G 299 (502)
+..|+..++.++ . .+ .+|+.+|..+++.|+ +..|.+.++.+..+.|.
T Consensus 244 ~a~ai~~~~~~~------~---~~-~~ni~~g~~~s~~el---~~~i~~~~~~~~~i~~~ 290 (343)
T 2b69_A 244 LVNGLVALMNSN------V---SS-PVNLGNPEEHTILEF---AQLIKNLVGSGSEIQFL 290 (343)
T ss_dssp HHHHHHHHHTSS------C---CS-CEEESCCCEEEHHHH---HHHHHHHHTCCCCEEEE
T ss_pred HHHHHHHHHHHC------C---CC-CEECCCCCCCHHHHH---HHHHHHHHCCCCCEEEC
T ss_conf 999999998624------4---78-623479851219999---99999986899876989
No 100
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A*
Probab=78.95 E-value=2.6 Score=20.00 Aligned_cols=37 Identities=22% Similarity=0.327 Sum_probs=28.0
Q ss_pred CEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCHHHHH
Q ss_conf 6179999668147999999985899844999825578855
Q gi|254781176|r 15 PRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDAQALM 54 (502)
Q Consensus 15 ~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~~~l~ 54 (502)
-||-+||+|-.|.....++.+.|. +..+.|-+.....
T Consensus 4 ~kIg~IGlG~MG~~mA~~L~~~G~---~v~v~dr~~~~~~ 40 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGY---LLNVFDLVQSAVD 40 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTC---EEEEECSSHHHHH
T ss_pred CEEEEEEEHHHHHHHHHHHHHCCC---EEEEECCCHHHHH
T ss_conf 889998254889999999997899---7899849999999
No 101
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=78.87 E-value=1.4 Score=22.05 Aligned_cols=108 Identities=14% Similarity=0.254 Sum_probs=64.6
Q ss_pred HHHCCCEEEEEEECCCHHHHHHHHHHC-CCCCCEEEEECCCHHHHHHC-CCCEEEEECCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 454386179999668147999999985-89984499982557885518-9970485155425567888883899999997
Q gi|254781176|r 10 ITELKPRITVFGVGGGGGNAVNNMVSS-GLQGVNFVVANTDAQALMMS-KAKQIIQLGSGITEGLGAGSHPEVGRAAAEE 87 (502)
Q Consensus 10 ~~~~~~~i~v~g~gg~g~n~~~~~~~~-~~~~~~~~~~ntd~~~l~~~-~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~ 87 (502)
.-.++-||.|||.|+-|.-++-.+.+. .+..-++.+++.|..+.... .-..++. -..+|+ +.
T Consensus 9 ~~~f~~kILiIG~GsVG~~vl~lL~rh~d~~~~~itVid~~~~~~~~~~~~g~~~~-~~~ld~---------------~N 72 (480)
T 2ph5_A 9 KILFKNRFVILGFGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKVDVAQQYGVSFK-LQQITP---------------QN 72 (480)
T ss_dssp CBCCCSCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSCCHHHHHTCEEE-ECCCCT---------------TT
T ss_pred EEEECCCEEEECCCHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHCCCCEE-EEECCH---------------HH
T ss_conf 77527988998987758999999985426787649997665557888875288436-763387---------------77
Q ss_pred HHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCC
Q ss_conf 2999999726998999980367666740789999999864984999950430
Q gi|254781176|r 88 CIDEITEMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPF 139 (502)
Q Consensus 88 ~~~~i~~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf 139 (502)
-.+.+..+|++.|+|.=++ ... .+..|+++|.+.|++-+-.+.-|.
T Consensus 73 ~~~~L~~~l~~~D~VVNls---~~~---~s~~I~~aC~e~Gv~YlDts~e~W 118 (480)
T 2ph5_A 73 YLEVIGSTLEENDFLIDVS---IGI---SSLALIILCNQKGALYINAATEPW 118 (480)
T ss_dssp HHHHTGGGCCTTCEEEECC---SSS---CHHHHHHHHHHHTCEEEESSCCCC
T ss_pred HHHHHHHHHCCCCEEEECC---CCC---CCHHHHHHHHHHCCCEEECCCCCC
T ss_conf 9999999834799899898---411---689999999984996686313567
No 102
>2f00_A UDP-N-acetylmuramate--L-alanine ligase; amide bond ligase, ATPase, bacterial cell WALL; 2.50A {Escherichia coli}
Probab=78.74 E-value=2.9 Score=19.66 Aligned_cols=115 Identities=23% Similarity=0.328 Sum_probs=52.7
Q ss_pred EEEEEEECCCHHHHHHHHH-HCCCCCCEEEEECCC----HHHHHHCCCCEEEEECCCCCC-----------CCCCCCCHH
Q ss_conf 1799996681479999999-858998449998255----788551899704851554255-----------678888838
Q gi|254781176|r 16 RITVFGVGGGGGNAVNNMV-SSGLQGVNFVVANTD----AQALMMSKAKQIIQLGSGITE-----------GLGAGSHPE 79 (502)
Q Consensus 16 ~i~v~g~gg~g~n~~~~~~-~~~~~~~~~~~~ntd----~~~l~~~~~~~~~~~g~~~~~-----------g~g~g~~~~ 79 (502)
||.++|+||.|..++-++. ..|.. ....+.- .+.|.... .++.+|...-. |. .=.+|+
T Consensus 21 ~i~~iGiggsGms~lA~~l~~~G~~---V~gsD~~~~~~~~~L~~~g--i~v~~g~~~~~~~~~d~vv~spgi-~~~~p~ 94 (491)
T 2f00_A 21 HIHFVGIGGAGMGGIAEVLANEGYQ---ISGSDLAPNPVTQQLMNLG--ATIYFNHRPENVRDASVVVVSSAI-SADNPE 94 (491)
T ss_dssp EEEEETTTSTTHHHHHHHHHHTTCE---EEEECSSCCHHHHHHHHTT--CEEESSCCGGGGTTCSEEEECTTC-CTTCHH
T ss_pred EEEEEEECHHHHHHHHHHHHHCCCE---EEEEECCCCHHHHHHHHCC--CEEECCCCHHHCCCCCEEEECCCC-CCCCHH
T ss_conf 7999985799999999999968993---9999499997999999788--999869898996999899989970-998899
Q ss_pred HHHHHHHH------HHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCC---EEEEEEECCCC
Q ss_conf 99999997------299999972699899998036766674078999999986498---49999504300
Q gi|254781176|r 80 VGRAAAEE------CIDEITEMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGV---LTVGVVTKPFH 140 (502)
Q Consensus 80 ~g~~~a~~------~~~~i~~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~---~~~~~v~~pf~ 140 (502)
+-+ |.+ ++-++...+-..-.++-++|--|.|-|- -.++.+.++.|. ...+-...|+.
T Consensus 95 ~~~--a~~~gi~v~~~~e~~~~~~~~~~~iaVTGTnGKTTtt--~ml~~iL~~~g~~~~~~~g~~~~~~~ 160 (491)
T 2f00_A 95 IVA--AHEARIPVIRRAEMLAELMRFRHGIAIAGTHGKTTTT--AMVSSIYAEAGLDPTFVNGGLVKAAG 160 (491)
T ss_dssp HHH--HHHTTCCEEEHHHHHHHHHTTSEEEEEESSSCHHHHH--HHHHHHHHHTTCCCEEEEEEEETTTT
T ss_pred HHH--HHHCCCCEEEHHHHHHHHHHCCEEEEEECCCCCCHHH--HHHHHHHHHCCCCCEEEECCCCCCHH
T ss_conf 999--9987996985899998665057279994567823299--99999999759993799716445024
No 103
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=78.58 E-value=1.8 Score=21.23 Aligned_cols=34 Identities=12% Similarity=0.160 Sum_probs=21.6
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 30004067888899999999986333545027888741
Q gi|254781176|r 138 PFHFEGSRRMRVAESGIEALQETVDTLIVIPNQNLFRI 175 (502)
Q Consensus 138 pf~~eg~~r~~~a~~~~~~l~~~~d~~i~i~n~~l~~~ 175 (502)
.|.+.| ..|-.-|-+.---.|+.|+=..|-|-++
T Consensus 73 ~~~~~g----~~Av~HLf~Va~GLdS~ivGE~qIlgQv 106 (404)
T 1gpj_A 73 AWVKRG----SEAVRHLFRVASGLESMMVGEQEILRQV 106 (404)
T ss_dssp CEEEEH----HHHHHHHHHHHTTTTSSSTTCHHHHHHH
T ss_pred HHEECC----HHHHHHHHHHHHCCCCCCCCHHHHHHHH
T ss_conf 510267----8999999987613534355808899999
No 104
>3fxa_A SIS domain protein; YP_013136.1, putative sugar-phosphate isomerase, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Listeria monocytogenes str}
Probab=77.86 E-value=3.1 Score=19.48 Aligned_cols=100 Identities=20% Similarity=0.267 Sum_probs=60.3
Q ss_pred CCEEEEEEECCCHHHHH---HHHHHCCCCCCEEEEEC-CCHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 86179999668147999---99998589984499982-557885518997048515542556788888389999999729
Q gi|254781176|r 14 KPRITVFGVGGGGGNAV---NNMVSSGLQGVNFVVAN-TDAQALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAEECI 89 (502)
Q Consensus 14 ~~~i~v~g~gg~g~n~~---~~~~~~~~~~~~~~~~n-td~~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~~ 89 (502)
+-||.++|+|..|-=+- .++.+.|+. .++++ ++.++....
T Consensus 45 ~~rI~~~G~G~S~~ia~~~~~kl~~lG~~---~~~~~d~~~~~~~~~--------------------------------- 88 (201)
T 3fxa_A 45 TGKIVVAGCGTSGVAAKKLVHSFNCIERP---AVFLTPSDAVHGTLG--------------------------------- 88 (201)
T ss_dssp SSCEEEECCTHHHHHHHHHHHHHHHTTCC---EEECCHHHHTTTGGG---------------------------------
T ss_pred CCCEEEEEECHHHHHHHHHHHHHHHCCCC---EEECCCHHHHHHHHC---------------------------------
T ss_conf 99389997777999999999999868996---585793788998843---------------------------------
Q ss_pred HHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999726998999980367666740789999999864984999950430004067888899999999986333545027
Q gi|254781176|r 90 DEITEMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPFHFEGSRRMRVAESGIEALQETVDTLIVIPN 169 (502)
Q Consensus 90 ~~i~~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf~~eg~~r~~~a~~~~~~l~~~~d~~i~i~n 169 (502)
.+..-|++|+...=|- |--.-.+++.||+.|+-+|+|...|-+ .|.+++|-++.++.
T Consensus 89 -----~~~~~Dv~I~iS~SG~---t~e~i~~~~~ak~~g~~vI~IT~~~~s---------------~la~~ad~~l~~~~ 145 (201)
T 3fxa_A 89 -----VLQKEDILILISKGGN---TGELLNLIPACKTKGSTLIGVTENPDS---------------VIAKEADIFFPVSV 145 (201)
T ss_dssp -----GCCTTCEEEEECSSSC---CHHHHTTHHHHHHHTCEEEEEESCTTS---------------HHHHHCSEEEECCC
T ss_pred -----CCCCCCEEEEECCCCC---CHHHHHHHHHHHHCCCEEEEEECCCCC---------------CCCCCCCEEEECCC
T ss_conf -----8897888998789999---578999999999839808998368999---------------75344786786561
Q ss_pred HHH
Q ss_conf 888
Q gi|254781176|r 170 QNL 172 (502)
Q Consensus 170 ~~l 172 (502)
+.-
T Consensus 146 ~~~ 148 (201)
T 3fxa_A 146 SKE 148 (201)
T ss_dssp SCC
T ss_pred CHH
T ss_conf 022
No 105
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; YP_263340.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=77.10 E-value=3.2 Score=19.33 Aligned_cols=90 Identities=16% Similarity=0.185 Sum_probs=48.3
Q ss_pred CCCCHHHCCCEEEEEEECCCHHHHHHHHHH-CCCCCCEEEEECC----C-HHHHHHCCCCEEEEECCCCCCCCCCCCCHH
Q ss_conf 578845438617999966814799999998-5899844999825----5-788551899704851554255678888838
Q gi|254781176|r 6 ANMDITELKPRITVFGVGGGGGNAVNNMVS-SGLQGVNFVVANT----D-AQALMMSKAKQIIQLGSGITEGLGAGSHPE 79 (502)
Q Consensus 6 ~~~~~~~~~~~i~v~g~gg~g~n~~~~~~~-~~~~~~~~~~~nt----d-~~~l~~~~~~~~~~~g~~~~~g~g~g~~~~ 79 (502)
+||+.+ --||.+||+||.|..++-++.. .|.. | ...+. + ...|.... .++.+|.. |+
T Consensus 13 ~~~~~~--g~~ih~iGigg~Gms~lA~~l~~~G~~-V--~gsD~~~~~~~~~~L~~~g--i~i~~G~~----------~~ 75 (524)
T 3hn7_A 13 ENLYFQ--GMHIHILGICGTFMGSLALLARALGHT-V--TGSDANIYPPMSTQLEQAG--VTIEEGYL----------IA 75 (524)
T ss_dssp --------CCEEEEETTTSHHHHHHHHHHHHTTCE-E--EEEESCCCTTHHHHHHHTT--CEEEESCC----------GG
T ss_pred HHHCCC--CCEEEEEEECHHHHHHHHHHHHHCCCE-E--EEEECCCCCHHHHHHHHCC--CEEECCCC----------HH
T ss_conf 650057--988999966888899999999968896-9--9990899967899999788--98985889----------89
Q ss_pred HHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEE
Q ss_conf 99999997299999972699899998036766674078999999986498499
Q gi|254781176|r 80 VGRAAAEECIDEITEMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTV 132 (502)
Q Consensus 80 ~g~~~a~~~~~~i~~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~ 132 (502)
. ...+.|+|++..|.--. .|.+ +.||+.|+-++
T Consensus 76 -----------~---i~~~~dlvV~Sp~i~~~-----~~~~-~~a~~~~i~i~ 108 (524)
T 3hn7_A 76 -----------H---LQPAPDLVVVGNAMKRG-----MDVI-EYMLDTGLRYT 108 (524)
T ss_dssp -----------G---GCSCCSEEEECTTCCTT-----SHHH-HHHHHHTCCEE
T ss_pred -----------H---CCCCCCEEEECCCCCCC-----CHHH-HHHHHCCCCEE
T ss_conf -----------9---69998789989974999-----9999-99998799787
No 106
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=76.47 E-value=2.8 Score=19.77 Aligned_cols=153 Identities=15% Similarity=0.232 Sum_probs=81.3
Q ss_pred EEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHCCCC------------------EEEEECCCCCCCCCCCCC
Q ss_conf 17999966814799999998589984499982557885518997------------------048515542556788888
Q gi|254781176|r 16 RITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDAQALMMSKAK------------------QIIQLGSGITEGLGAGSH 77 (502)
Q Consensus 16 ~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~~~l~~~~~~------------------~~~~~g~~~~~g~g~g~~ 77 (502)
||.|||+|--|......+.+.|.. ++.++++.|...+...... .-|.|...
T Consensus 35 ~I~IIGlG~mG~siA~~L~~~g~~-~~V~g~D~~~~~~~~a~~~g~id~~~~~~~~~~~~~~dlIilavP---------- 103 (314)
T 3ggo_A 35 NVLIVGVGFMGGSFAKSLRRSGFK-GKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSP---------- 103 (314)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCC-SEEEEECSCHHHHHHHHHTTSCSEEESCTTGGGGGCCSEEEECSC----------
T ss_pred EEEEEEECHHHHHHHHHHHCCCCC-CEEEEEECCHHHHHHHHHCCCCCCCCCCHHHHHCCCCCEEEECCC----------
T ss_conf 799982088999999999806999-889999799999999998699751148988872568888998355----------
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCC--------------CCC-
Q ss_conf 38999999972999999726998999980367666740789999999864984999950430--------------004-
Q gi|254781176|r 78 PEVGRAAAEECIDEITEMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPF--------------HFE- 142 (502)
Q Consensus 78 ~~~g~~~a~~~~~~i~~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf--------------~~e- 142 (502)
|+ +..+-..+|...+...-+|.-++. --.+++..+.+.++.--|+. -|. -|+
T Consensus 104 ~~----~~~~vl~~l~~~l~~~~iI~Dv~S-------vK~~i~~~~~~~~~~~fV~~--HPm~G~e~~g~~~a~~~lf~~ 170 (314)
T 3ggo_A 104 VR----TFREIAKKLSYILSEDATVTDQGS-------VKGKLVYDLENILGKRFVGG--HPIAGTEKSGVEYSLDNLYEG 170 (314)
T ss_dssp GG----GHHHHHHHHHHHSCTTCEEEECCS-------CCTHHHHHHHHHHGGGEECE--EECCCCCCCSGGGCCTTTTTT
T ss_pred HH----HHHHHHHHHHHHCCCCCCCCCCCC-------CCHHHHHHHHHHCCCCEEEC--CCCCCCCCCCCCCHHHHHHCC
T ss_conf 04----321045543111034554456455-------41899999985168865514--644566666744123454136
Q ss_pred -------CHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHCCCCCHHHHHHHHHHHHH
Q ss_conf -------06788889999999998633354502----7888741366531899974467999
Q gi|254781176|r 143 -------GSRRMRVAESGIEALQETVDTLIVIP----NQNLFRIANDKTTFADAFSMADQVL 193 (502)
Q Consensus 143 -------g~~r~~~a~~~~~~l~~~~d~~i~i~----n~~l~~~~~~~~~~~~af~~~d~~l 193 (502)
.......+.+-+.+|-+.+-+.++.- -|+.+-...- +|..-++++++-+.
T Consensus 171 ~~~il~~~~~~~~~~~~~v~~l~~~~G~~~~~~~~~eHD~~~A~vsh-lph~~a~al~~~~~ 231 (314)
T 3ggo_A 171 KKVILTPTKKTDKKRLKLVKRVWEDVGGVVEYMSPELHDYVFGVVSH-LPHAVAFALVDTLI 231 (314)
T ss_dssp CEEEECCCTTSCHHHHHHHHHHHHHTTCEEEECCHHHHHHHHHHHTH-HHHHHHHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHH-HHHHHHHHHHHHHH
T ss_conf 42652058778889999999999972997899778999999999835-89999999999998
No 107
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=75.77 E-value=3.1 Score=19.47 Aligned_cols=175 Identities=18% Similarity=0.303 Sum_probs=87.8
Q ss_pred EEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHH----------
Q ss_conf 1799996681479999999858998449998255788551899704851554255678888838999999----------
Q gi|254781176|r 16 RITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDAQALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAA---------- 85 (502)
Q Consensus 16 ~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a---------- 85 (502)
||-+||+|-.|.....++.+.|. +..+.|.+.......... |.. .-.+|. ..++
T Consensus 6 kIg~IGlG~MG~~mA~~L~~~g~---~v~v~dr~~~~~~~l~~~-----Ga~------~~~s~~--e~~~~~dvv~~~l~ 69 (301)
T 3cky_A 6 KIGFIGLGAMGKPMAINLLKEGV---TVYAFDLMEANVAAVVAQ-----GAQ------ACENNQ--KVAAASDIIFTSLP 69 (301)
T ss_dssp EEEEECCCTTHHHHHHHHHHTTC---EEEEECSSHHHHHHHHTT-----TCE------ECSSHH--HHHHHCSEEEECCS
T ss_pred EEEEEEHHHHHHHHHHHHHHCCC---EEEEECCCHHHHHHHHHC-----CCE------ECCCHH--HHHHCCCEEEEEEC
T ss_conf 89998027889999999997899---289977999999999984-----997------858999--99845873688505
Q ss_pred --------HHHHHHHHHHHCCCCEEEEEECCCCCCCC-CHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHH---
Q ss_conf --------97299999972699899998036766674-078999999986498499995043000406788889999---
Q gi|254781176|r 86 --------EECIDEITEMLDKTHMCFVTAGMGGGTGT-GAAPIIAKIARNKGVLTVGVVTKPFHFEGSRRMRVAESG--- 153 (502)
Q Consensus 86 --------~~~~~~i~~~~~~~~~~~~~ag~gggtgt-g~~p~ia~~a~~~~~~~~~~v~~pf~~eg~~r~~~a~~~--- 153 (502)
....+.+...+..-.+ ||-. .|.+ .-+--+++.+++.|+-- +--|.. =|+ ..|..|
T Consensus 70 ~~~a~~~v~~~~~~i~~~~~~g~i-iid~----sT~~p~~~~~~~~~~~~~g~~~---ldaPVs-Gg~---~~A~~g~l~ 137 (301)
T 3cky_A 70 NAGIVETVMNGPGGVLSACKAGTV-IVDM----SSVSPSSTLKMAKVAAEKGIDY---VDAPVS-GGT---KGAEAGTLT 137 (301)
T ss_dssp SHHHHHHHHHSTTCHHHHSCTTCE-EEEC----CCCCHHHHHHHHHHHHHTTCEE---EECCEE-SHH---HHHHHTCEE
T ss_pred CHHHHHHHHHCCCCHHHHCCCCCE-EEEC----CCCCHHHHHHHHHHHHHCCCEE---EECCCC-CCH---HHHHCCCEE
T ss_conf 688999998175036552589928-9989----9999899999999999769928---924775-887---786249758
Q ss_pred ---------HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH-HHHHHHHHHCCCCCCCCHHHHHHHHCC
Q ss_conf ---------9999986333545027888741366531899974467999999-888887651665555898787876415
Q gi|254781176|r 154 ---------IEALQETVDTLIVIPNQNLFRIANDKTTFADAFSMADQVLYSG-VSCITDLMIKEGLINLDFADVRSVMRN 223 (502)
Q Consensus 154 ---------~~~l~~~~d~~i~i~n~~l~~~~~~~~~~~~af~~~d~~l~~~-v~~i~~~i~~~g~in~df~d~~~v~~~ 223 (502)
+++.+.....+ -.+.+. .++ .+--...+++++.+.-+ +.++.+.+.-----.+|...+..++..
T Consensus 138 i~~gG~~~~~~~~~~~l~~~----~~~i~~-~G~-~G~g~~~Kl~~N~l~~~~~~~~~Ea~~la~~~Gid~~~~~~~l~~ 211 (301)
T 3cky_A 138 IMVGASEAVFEKIQPVLSVI----GKDIYH-VGD-TGAGDAVKIVNNLLLGCNMASLAEALVLGVKCGLKPETMQEIIGK 211 (301)
T ss_dssp EEEESCHHHHHHHHHHHHHH----EEEEEE-EES-TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHT
T ss_pred EEECCCHHHHHHCCHHHHHH----CCCEEE-ECC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC
T ss_conf 98479999998670999984----897799-589-756789999988999999999999999998729989999998627
Q ss_pred C
Q ss_conf 8
Q gi|254781176|r 224 M 224 (502)
Q Consensus 224 ~ 224 (502)
+
T Consensus 212 ~ 212 (301)
T 3cky_A 212 S 212 (301)
T ss_dssp S
T ss_pred C
T ss_conf 7
No 108
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=75.57 E-value=1.2 Score=22.54 Aligned_cols=41 Identities=15% Similarity=0.241 Sum_probs=30.7
Q ss_pred HHHCCCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCHHHH
Q ss_conf 45438617999966814799999998589984499982557885
Q gi|254781176|r 10 ITELKPRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDAQAL 53 (502)
Q Consensus 10 ~~~~~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~~~l 53 (502)
=+..+-||-|||.|-.|.-...++.+.|.+ ..+.|.+....
T Consensus 5 ~~~~~m~Ig~IG~G~mG~~ia~~L~~~G~~---V~v~~r~~~~~ 45 (306)
T 3l6d_A 5 DESFEFDVSVIGLGAMGTIMAQVLLKQGKR---VAIWNRSPGKA 45 (306)
T ss_dssp CCCCSCSEEEECCSHHHHHHHHHHHHTTCC---EEEECSSHHHH
T ss_pred CCCCCCCEEEEEHHHHHHHHHHHHHHCCCE---EEEEECCHHHH
T ss_conf 888899589985799999999999977996---99995999999
No 109
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, protein structure initiative; 1.88A {Caenorhabditis elegans}
Probab=75.47 E-value=3.5 Score=19.03 Aligned_cols=209 Identities=15% Similarity=0.232 Sum_probs=92.7
Q ss_pred CEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHCCC-----------------------------------C
Q ss_conf 61799996681479999999858998449998255788551899-----------------------------------7
Q gi|254781176|r 15 PRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDAQALMMSKA-----------------------------------K 59 (502)
Q Consensus 15 ~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~~~l~~~~~-----------------------------------~ 59 (502)
-||.|||.|=.|.-.--.+...| .+.+.++++.|..-+...+. +
T Consensus 10 ~KI~ViGlGyVGl~~a~~~A~~g-~~~~V~g~Did~~~v~~l~~g~~p~~Ep~l~ell~~~~~~~l~~tt~~~~~i~~~d 88 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKC-PHITVTVVDMNTAKIAEWNSDKLPIYEPGLDEIVFAARGRNLFFSSDIPKAIAEAD 88 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHC-TTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHHCS
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CCCEEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCEEECCHHHHHHCCC
T ss_conf 75999877777899999998149-99859999899999999977889977989899999987379589668688883299
Q ss_pred EE-EEECCCCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEE
Q ss_conf 04-8515542556788--88838999999972999999726998999980367666740789999999864984999950
Q gi|254781176|r 60 QI-IQLGSGITEGLGA--GSHPEVGRAAAEECIDEITEMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVT 136 (502)
Q Consensus 60 ~~-~~~g~~~~~g~g~--g~~~~~g~~~a~~~~~~i~~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~ 136 (502)
.- |.++.. ++.-|. ...|++ ...+.....|.+.+....+|++..-.-.||..-..|.+.+......-.-+.++.
T Consensus 89 ii~I~VpTP-~~~~~~~~~~~~d~--s~l~~~~~~i~~~~~~~~~vi~~STvppgt~~~~~~~l~~~~~~~~~~df~l~~ 165 (481)
T 2o3j_A 89 LIFISVNTP-TKMYGRGKGMAPDL--KYVESVSRTIAQYAGGPKIVVEKSTVPVKAAESIGCILREAQKNNENLKFQVLS 165 (481)
T ss_dssp EEEECCCCC-BCCSSTTTTTSBCC--HHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHHHTC----CCEEEEE
T ss_pred EEEEECCCC-CCCCCCCCCCCCCH--HHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHCCCCCCCCCCCCC
T ss_conf 899977999-88677656767504--666766999986437884799726769972434202433210236686523346
Q ss_pred CC-CCCCCHHHH---------------HHHHHHHHHHHHHH-----HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
Q ss_conf 43-000406788---------------88999999999863-----3354502788874136653189997446799999
Q gi|254781176|r 137 KP-FHFEGSRRM---------------RVAESGIEALQETV-----DTLIVIPNQNLFRIANDKTTFADAFSMADQVLYS 195 (502)
Q Consensus 137 ~p-f~~eg~~r~---------------~~a~~~~~~l~~~~-----d~~i~i~n~~l~~~~~~~~~~~~af~~~d~~l~~ 195 (502)
-| |-.||.... ..+.+....+.+.- +..+++.+=.=.|+.+ -+..+|+..+=-+.+
T Consensus 166 ~PErl~~G~a~~d~~~~~~iviG~~~~~~~~~~~~~~~~ly~~~~~~~~i~~~~~~~AE~~K---l~~N~~r~~~Iaf~N 242 (481)
T 2o3j_A 166 NPEFLAEGTAMKDLANPDRVLIGGESSPEGLQAVAELVRIYENWVPRNRIITTNTWSSELSK---LVANAFLAQRISSIN 242 (481)
T ss_dssp CCCCCCTTCHHHHHHSCSCEEEEECSSHHHHHHHHHHHHHHHTTSCGGGEEEEEHHHHHHHH---HHHHHHHHHHHHHHH
T ss_pred CCCEECCCCHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHH---HHHHHHHHHHHHHHH
T ss_conf 81103266512110478757745875477899999999999721678809957888999999---999999999999999
Q ss_pred HHHHHHHHHHCCCCCCCCHHHHHHHHCC---CCEEEEEEEECCC
Q ss_conf 9888887651665555898787876415---8658998761486
Q gi|254781176|r 196 GVSCITDLMIKEGLINLDFADVRSVMRN---MGRAMMGTGEASG 236 (502)
Q Consensus 196 ~v~~i~~~i~~~g~in~df~d~~~v~~~---~g~a~~g~g~~~g 236 (502)
-+.-+++ -.++|+.+|...+.. -|...+--|-+-|
T Consensus 243 Ela~i~e------~~gid~~~V~~a~~~d~rig~~~~~pg~G~G 280 (481)
T 2o3j_A 243 SISAVCE------ATGAEISEVAHAVGYDTRIGSKFLQASVGFG 280 (481)
T ss_dssp HHHHHHH------HHSCCHHHHHHHHHTSTTTCSSSCCCCSCCC
T ss_pred HHHHHHH------HCCCCHHHHHHHHCCCCCCCCCCCCCCCCCC
T ss_conf 9999999------8399899999996279985655567688877
No 110
>2ajr_A Sugar kinase, PFKB family; TM0828, possible 1-phosphofructokinase (EC 2.7.1.56), structural genomics, joint center for structural genomics; HET: MSE; 2.46A {Thermotoga maritima} SCOP: c.72.1.1
Probab=75.29 E-value=3.6 Score=18.99 Aligned_cols=113 Identities=18% Similarity=0.200 Sum_probs=65.3
Q ss_pred EEEEECCCHHHHHHHHHHCCCCCCEEEEE-CCC-----HHHHHHC--CCCEE-EEEC--------------CCCCCCCCC
Q ss_conf 99996681479999999858998449998-255-----7885518--99704-8515--------------542556788
Q gi|254781176|r 18 TVFGVGGGGGNAVNNMVSSGLQGVNFVVA-NTD-----AQALMMS--KAKQI-IQLG--------------SGITEGLGA 74 (502)
Q Consensus 18 ~v~g~gg~g~n~~~~~~~~~~~~~~~~~~-ntd-----~~~l~~~--~~~~~-~~~g--------------~~~~~g~g~ 74 (502)
.-...||+|.|+--.+.+.|.+ +.|+.+ --| .+.|... ..+.. +... ...|.-...
T Consensus 46 ~~~~~GG~g~NvA~~l~~LG~~-~~~~g~vG~d~g~~i~~~L~~~~~~i~~~~v~~~~~T~~~i~i~~~~~~~~~~~~~~ 124 (331)
T 2ajr_A 46 TQMSPGGKGINVSIALSKLGVP-SVATGFVGGYMGKILVEELRKISKLITTNFVYVEGETRENIEIIDEKNKTITAINFP 124 (331)
T ss_dssp EEEEEESHHHHHHHHHHHTTCC-EEEEEEEEHHHHHHHHHHHHHHCTTEEEEEEEESSCCEEEEEEEETTTTEEEEEECC
T ss_pred EEECCCCHHHHHHHHHHHCCCC-EEEEEEECCCHHHHHHHHHHHHCCCCCCEEEECCCCCCEEEEEEECCCCCEEEEECC
T ss_conf 6878798899999999987998-799999457218999999998289987125855899846899997699838998457
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEE
Q ss_conf 88838999999972999999726998999980367666740789999999864984999
Q gi|254781176|r 75 GSHPEVGRAAAEECIDEITEMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVG 133 (502)
Q Consensus 75 g~~~~~g~~~a~~~~~~i~~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~ 133 (502)
| |.+......+..+.+...+..+|+|++..-+-.|......--+++.||+.|+.++-
T Consensus 125 g--~~i~~~~~~~~~~~~~~~l~~~d~v~lsGslp~~~~~~~~~~l~~~a~~~g~~v~~ 181 (331)
T 2ajr_A 125 G--PDVTDMDVNHFLRRYKMTLSKVDCVVISGSIPPGVNEGICNELVRLARERGVFVFV 181 (331)
T ss_dssp C--CCCCHHHHHHHHHHHHHHHTTCSEEEEESCCCTTSCTTHHHHHHHHHHHTTCEEEE
T ss_pred C--CCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEE
T ss_conf 8--77999999999999997636699999957675534689999999988751965774
No 111
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics; 1.90A {Neisseria meningitidis MC58} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=74.37 E-value=2.2 Score=20.63 Aligned_cols=181 Identities=16% Similarity=0.185 Sum_probs=87.5
Q ss_pred EEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHCCCC---------------EEEEECCCCCCCCCCCCCHHH
Q ss_conf 17999966814799999998589984499982557885518997---------------048515542556788888389
Q gi|254781176|r 16 RITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDAQALMMSKAK---------------QIIQLGSGITEGLGAGSHPEV 80 (502)
Q Consensus 16 ~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~~~l~~~~~~---------------~~~~~g~~~~~g~g~g~~~~~ 80 (502)
||.+||.|.-|.-.+..++..+. .+.++.|-+...+...... .-|.|+. .|..
T Consensus 2 kI~fIG~G~mg~ai~~gl~~~~~--~~i~v~~r~~~~~~~l~~~~~v~~~~~~~~~~~~dvi~l~v----------kP~~ 69 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGG--YRIYIANRGAEKRERLEKELGVETSATLPELHSDDVLILAV----------KPQD 69 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCS--CEEEEECSSHHHHHHHHHHTCCEEESSCCCCCTTSEEEECS----------CHHH
T ss_pred EEEEECCCHHHHHHHHHHHHCCC--CCEEEECCCHHHHHHHHHHCCCEECCCHHHHCCCCEEEEEC----------CHHH
T ss_conf 89999442999999999996899--86899749999999999973957726745640467799825----------7788
Q ss_pred HHHHHHHHHHHHHHHHC--CCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCC------------CCCCHHH
Q ss_conf 99999972999999726--998999980367666740789999999864984999950430------------0040678
Q gi|254781176|r 81 GRAAAEECIDEITEMLD--KTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPF------------HFEGSRR 146 (502)
Q Consensus 81 g~~~a~~~~~~i~~~~~--~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf------------~~eg~~r 146 (502)
-+.. .+.+. +.-+|=++||. + +.++.+-.+--.--+-.||. .+. ..-
T Consensus 70 ~~~v--------l~~l~~~~~~iIS~~AGi---~-------~~~l~~~~~~~~~ivR~mPn~~~~~~~g~t~~~~~-~~~ 130 (263)
T 1yqg_A 70 MEAA--------CKNIRTNGALVLSVAAGL---S-------VGTLSRYLGGTRRIVRVMPNTPGKIGLGVSGMYAE-AEV 130 (263)
T ss_dssp HHHH--------HTTCCCTTCEEEECCTTC---C-------HHHHHHHTTSCCCEEEEECCGGGGGTCEEEEEECC-TTS
T ss_pred HHHH--------HHHHCCCCCEEEEECCCC---C-------HHHHHHHCCCCCEEEEECCCCHHHHHHCCCCCCCC-CCC
T ss_conf 8887--------787524776799807998---7-------77899873998648871797257887186200157-432
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----CCCC----HHHHHH-----------HHHHHHHHHHHHHHHHHHHCC
Q ss_conf 888999999999863335450278887413----6653----189997-----------446799999988888765166
Q gi|254781176|r 147 MRVAESGIEALQETVDTLIVIPNQNLFRIA----NDKT----TFADAF-----------SMADQVLYSGVSCITDLMIKE 207 (502)
Q Consensus 147 ~~~a~~~~~~l~~~~d~~i~i~n~~l~~~~----~~~~----~~~~af-----------~~~d~~l~~~v~~i~~~i~~~ 207 (502)
......-+..|-...-..+.+.++.++..+ +--. -+.+|| ..|.+++.+.+.|-..++.+.
T Consensus 131 ~~~~~~~v~~l~~~~G~~v~~~~E~~~~~~tal~gsgpa~~~~~~~a~~~~~~~~Gl~~~~a~~lv~~~~~G~~~l~~~s 210 (263)
T 1yqg_A 131 SETDRRIADRIMKSVGLTVWLDDEEKMHGITGISGSGPAYVFYLLDALQNAAIRQGFDMAEARALSLATFKGAVALAEQT 210 (263)
T ss_dssp CHHHHHHHHHHHHTTEEEEECSSTTHHHHHHHHTTSHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 08999999999986065102441887765777735509999999999999998749987899999999999899999862
Q ss_pred CCCCCCHHHHH-HHHCCCCEEEEE
Q ss_conf 55558987878-764158658998
Q gi|254781176|r 208 GLINLDFADVR-SVMRNMGRAMMG 230 (502)
Q Consensus 208 g~in~df~d~~-~v~~~~g~a~~g 230 (502)
| .+|++++ .|.+-+|.+.-|
T Consensus 211 ~---~~p~~l~~~V~spgGtT~~g 231 (263)
T 1yqg_A 211 G---EDFEKLQKNVTSKGGTTHEA 231 (263)
T ss_dssp C---CCHHHHHHHTCCTTSHHHHH
T ss_pred C---CCHHHHHHHCCCCCHHHHHH
T ss_conf 9---99999998578994679999
No 112
>1vim_A Hypothetical protein AF1796; structural genomics, unknown function; 1.36A {Archaeoglobus fulgidus} SCOP: c.80.1.3
Probab=74.10 E-value=3.7 Score=18.92 Aligned_cols=56 Identities=23% Similarity=0.239 Sum_probs=40.5
Q ss_pred CCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 69989999803676667407899999998649849999504300040678888999999999863335450278
Q gi|254781176|r 97 DKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPFHFEGSRRMRVAESGIEALQETVDTLIVIPNQ 170 (502)
Q Consensus 97 ~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf~~eg~~r~~~a~~~~~~l~~~~d~~i~i~n~ 170 (502)
..-|+||+.. ..|-| --.-.+++.||+.|+-+|+|...|.+ + |.+.+|-+|.+|.+
T Consensus 88 ~~~DvvI~iS-~sG~t--~~~~~~~~~ak~~g~~vI~IT~~~~s---~------------L~~~ad~~l~~~~~ 143 (200)
T 1vim_A 88 TDQDVLVGIS-GSGET--TSVVNISKKAKDIGSKLVAVTGKRDS---S------------LAKMADVVMVVKGK 143 (200)
T ss_dssp CTTCEEEEEC-SSSCC--HHHHHHHHHHHHHTCEEEEEESCTTS---H------------HHHHCSEEEECCSS
T ss_pred CCCCEEEEEC-CCCCC--CCHHHHHHHHHHCCCEEEEEECCCCC---H------------HHHHCCEEEEECCC
T ss_conf 9999899857-99774--21699999999879969999799999---7------------89959999993898
No 113
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X- RAY crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=74.08 E-value=2.9 Score=19.65 Aligned_cols=37 Identities=16% Similarity=0.249 Sum_probs=29.7
Q ss_pred EEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHH
Q ss_conf 1799996681479999999858998449998255788551
Q gi|254781176|r 16 RITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDAQALMM 55 (502)
Q Consensus 16 ~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~~~l~~ 55 (502)
||-|||.|--|....-++.+.| .+.+++|.+.+.+..
T Consensus 2 kI~iIG~G~mG~sla~~L~~~g---~~V~~~d~~~~~~~~ 38 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRG---HYLIGVSRQQSTCEK 38 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT---CEEEEECSCHHHHHH
T ss_pred EEEEEEECHHHHHHHHHHHHCC---CEEEEEECCHHHHHH
T ss_conf 8999903999999999999688---979999899999999
No 114
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by light; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=74.05 E-value=3.8 Score=18.78 Aligned_cols=108 Identities=16% Similarity=0.204 Sum_probs=56.6
Q ss_pred CHHHCCCEEEEEEECC---CHHHHHHHHHHCCCCC----CEEEEECCC---------HHHHHHCC--CCEEEEECCCCCC
Q ss_conf 8454386179999668---1479999999858998----449998255---------78855189--9704851554255
Q gi|254781176|r 9 DITELKPRITVFGVGG---GGGNAVNNMVSSGLQG----VNFVVANTD---------AQALMMSK--AKQIIQLGSGITE 70 (502)
Q Consensus 9 ~~~~~~~~i~v~g~gg---~g~n~~~~~~~~~~~~----~~~~~~ntd---------~~~l~~~~--~~~~~~~g~~~~~ 70 (502)
+.+.+++.+||.=+|+ -|.+.+-++....+.| +++..++.+ +..|..+. ...++.++..
T Consensus 25 ~~~~~k~~~kV~V~GAaG~ig~~l~~~La~g~vfg~~~~v~L~L~Di~~~~~~l~G~amDL~d~a~~~~~~i~i~~~--- 101 (375)
T 7mdh_A 25 KTKSWKKLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIGID--- 101 (375)
T ss_dssp ----CCCCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESC---
T ss_pred HHHCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCEEEECC---
T ss_conf 45411787589998997099999999996585238997069999467341001266999986047655798798278---
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCC-------HHHHHHHHHHHC-----CCEEEEEEECC
Q ss_conf 678888838999999972999999726998999980367666740-------789999999864-----98499995043
Q gi|254781176|r 71 GLGAGSHPEVGRAAAEECIDEITEMLDKTHMCFVTAGMGGGTGTG-------AAPIIAKIARNK-----GVLTVGVVTKP 138 (502)
Q Consensus 71 g~g~g~~~~~g~~~a~~~~~~i~~~~~~~~~~~~~ag~gggtgtg-------~~p~ia~~a~~~-----~~~~~~~v~~p 138 (502)
..+.++|+|+|+|+||.-..-|-- -+.++..+++.. .-.-|-|||-|
T Consensus 102 ---------------------~~~a~~~aDvVVitaG~prkpG~tR~dLl~~Na~I~k~~~~~I~~~a~~~~~ilVvsNP 160 (375)
T 7mdh_A 102 ---------------------PYEVFEDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVGNP 160 (375)
T ss_dssp ---------------------HHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSS
T ss_pred ---------------------HHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCC
T ss_conf ---------------------69984799989994688999899879999999899999999987424673499824794
Q ss_pred CC
Q ss_conf 00
Q gi|254781176|r 139 FH 140 (502)
Q Consensus 139 f~ 140 (502)
-.
T Consensus 161 vd 162 (375)
T 7mdh_A 161 CN 162 (375)
T ss_dssp HH
T ss_pred HH
T ss_conf 89
No 115
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.00A {Bacillus cereus atcc 14579}
Probab=73.89 E-value=1.2 Score=22.50 Aligned_cols=41 Identities=15% Similarity=0.317 Sum_probs=32.0
Q ss_pred CEEEEEEECCCHHHHHHHHHHCCCCC-CEEEEECCCHHHHHH
Q ss_conf 61799996681479999999858998-449998255788551
Q gi|254781176|r 15 PRITVFGVGGGGGNAVNNMVSSGLQG-VNFVVANTDAQALMM 55 (502)
Q Consensus 15 ~~i~v~g~gg~g~n~~~~~~~~~~~~-~~~~~~ntd~~~l~~ 55 (502)
-||.+||.|.-|.-.+..|+..+... -++++.+.....+..
T Consensus 3 kkI~fIG~G~mg~ai~~gl~~~~~~~~~~i~~~~~~~~~~~~ 44 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNTANLKN 44 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHH
T ss_conf 829998576999999999997799996769997989999999
No 116
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=73.82 E-value=2.8 Score=19.76 Aligned_cols=168 Identities=15% Similarity=0.186 Sum_probs=80.7
Q ss_pred EEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 17999966814799999998589984499982557885518997048515542556788888389999999729999997
Q gi|254781176|r 16 RITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDAQALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAEECIDEITEM 95 (502)
Q Consensus 16 ~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~~~~i~~~ 95 (502)
||-|||+|-.|.....++.+.|. +.++.|-+......... .|+-.-... .++
T Consensus 2 ~Ig~IGlG~MG~~ma~~L~~~G~---~v~v~dr~~~~~~~l~~-------------~Ga~~~~s~------------~e~ 53 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGY---PLIIYDVFPDACKEFQD-------------AGEQVVSSP------------ADV 53 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTC---CEEEECSSTHHHHHHHT-------------TTCEECSSH------------HHH
T ss_pred CEEEEEHHHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHH-------------CCCEECCCH------------HHH
T ss_conf 19998047989999999996899---69999199999999998-------------599672999------------999
Q ss_pred HCCCCEEEEEECC-------------------------CCCCCC-CHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHH
Q ss_conf 2699899998036-------------------------766674-07899999998649849999504300040678888
Q gi|254781176|r 96 LDKTHMCFVTAGM-------------------------GGGTGT-GAAPIIAKIARNKGVLTVGVVTKPFHFEGSRRMRV 149 (502)
Q Consensus 96 ~~~~~~~~~~ag~-------------------------gggtgt-g~~p~ia~~a~~~~~~~~~~v~~pf~~eg~~r~~~ 149 (502)
.+.+|.||++--. --.|++ .-+.-+++.+++.|+- ++--|..- |+ ..
T Consensus 54 ~~~~d~v~~~l~~~~~~~~v~~~~~~~~~~~~~g~~ivd~sT~~p~~~~~~~~~~~~~g~~---~ldapv~g-~~---~~ 126 (296)
T 2gf2_A 54 AEKADRIITMLPTSINAIEAYSGANGILKKVKKGSLLIDSSTIDPAVSKELAKEVEKMGAV---FMDAPVSG-GV---GA 126 (296)
T ss_dssp HHHCSEEEECCSSHHHHHHHHHSTTSGGGTCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE---EEECCEES-HH---HH
T ss_pred HHCCCCEEEECCCCHHHHHHHCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCE---EEECCCCC-CH---HH
T ss_conf 8579966883488467742103543311469999999989989999999999999983998---99638637-88---89
Q ss_pred HHHH------------HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH-HHHHHHHHHCCCCCCCCHHH
Q ss_conf 9999------------9999986333545027888741366531899974467999999-88888765166555589878
Q gi|254781176|r 150 AESG------------IEALQETVDTLIVIPNQNLFRIANDKTTFADAFSMADQVLYSG-VSCITDLMIKEGLINLDFAD 216 (502)
Q Consensus 150 a~~~------------~~~l~~~~d~~i~i~n~~l~~~~~~~~~~~~af~~~d~~l~~~-v~~i~~~i~~~g~in~df~d 216 (502)
|..| .++.+.....+ -.+.+. .++ .+--.+.++++..+..+ +.++.+.+..---..||...
T Consensus 127 a~~g~l~~~~gG~~~~~~~~~~~l~~~----~~~~~~-~G~-~G~a~~~Kl~~N~~~~~~~~~~~Ea~~la~~~gid~~~ 200 (296)
T 2gf2_A 127 ARSGNLTFMVGGVEDEFAAAQELLGCM----GSNVVY-CGA-VGTGQAAKICNNMLLAISMIGTAEAMNLGIRLGLDPKL 200 (296)
T ss_dssp HHHTCEEEEEESCGGGHHHHHHHHTTT----EEEEEE-EES-TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHH
T ss_pred HHCCCEEEEEECCHHHHHHHHHHHHHH----CCCEEE-ECC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
T ss_conf 853953999717662699999999984----797699-799-87889999998999999999999999999984979999
Q ss_pred HHHHHCCC
Q ss_conf 78764158
Q gi|254781176|r 217 VRSVMRNM 224 (502)
Q Consensus 217 ~~~v~~~~ 224 (502)
+..+++.+
T Consensus 201 ~~~~l~~~ 208 (296)
T 2gf2_A 201 LAKILNMS 208 (296)
T ss_dssp HHHHHHTS
T ss_pred HHHHHHHC
T ss_conf 99999857
No 117
>2w7t_A CTP synthetase, putative cytidine triphosphate synthase; glutaminase domain, trypsanosoma brucei, ligase, acivicin; HET: 5CS; 2.10A {Trypanosoma brucei}
Probab=73.73 E-value=3.9 Score=18.72 Aligned_cols=45 Identities=29% Similarity=0.388 Sum_probs=38.1
Q ss_pred HHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEE
Q ss_conf 9999972699899998036766674078999999986498499995
Q gi|254781176|r 90 DEITEMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVV 135 (502)
Q Consensus 90 ~~i~~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v 135 (502)
++..+.|.+.|=|+|..|+|. -|.-..=-.++.||+.++-++|++
T Consensus 59 ~~~~~~L~~~dGIlvpgGFG~-RG~eGkI~Ai~yARen~iPfLGIC 103 (273)
T 2w7t_A 59 DEARKALLGCDGIFVPGGFGN-RGVDGKCAAAQVARMNNIPYFGVX 103 (273)
T ss_dssp HHHHHHHHTCSEEEECCCCTT-TTHHHHHHHHHHHHHHTCCEEEET
T ss_pred HHHHHHHCCCCCEEECCCCCC-CCHHHHHHHHHHHHHCCCCCHHHH
T ss_conf 789987425774685885787-764789999999997488602455
No 118
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=73.67 E-value=3.9 Score=18.71 Aligned_cols=103 Identities=19% Similarity=0.248 Sum_probs=63.5
Q ss_pred CCEEEEEEE-CCCHHHHHHHHHHCCCCCCEEEEECCCH---HHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 861799996-6814799999998589984499982557---885518997048515542556788888389999999729
Q gi|254781176|r 14 KPRITVFGV-GGGGGNAVNNMVSSGLQGVNFVVANTDA---QALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAEECI 89 (502)
Q Consensus 14 ~~~i~v~g~-gg~g~n~~~~~~~~~~~~~~~~~~ntd~---~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~~ 89 (502)
|.+|.|.|- |.-|.+.+..+...|-..|-.+.-+++. +.|.... .++..|.- . +.
T Consensus 5 ~k~ILVtGatG~iG~~lv~~Ll~~g~~~V~~l~R~~~~~~~~~l~~~~--v~~v~~D~--------~-----------~~ 63 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQG--AEVVQGDQ--------D-----------DQ 63 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHHTT--CEEEECCT--------T-----------CH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHCCC--CEEEEEEC--------C-----------CC
T ss_conf 988999899888999999999958997199998685301013440189--78999443--------5-----------63
Q ss_pred HHHHHHHCCCCEEEEEECCCCCCCC----CHHHHHHHHHHHCCCEEEEEEEC
Q ss_conf 9999972699899998036766674----07899999998649849999504
Q gi|254781176|r 90 DEITEMLDKTHMCFVTAGMGGGTGT----GAAPIIAKIARNKGVLTVGVVTK 137 (502)
Q Consensus 90 ~~i~~~~~~~~~~~~~ag~gggtgt----g~~p~ia~~a~~~~~~~~~~v~~ 137 (502)
+.+..++.+.|.||.+++....+.. .+.-.+++.|+..|.-.+-+++.
T Consensus 64 ~~~~~a~~~~d~v~~~~~~~~~~~~~~~~~~~~~~~~aa~~~g~~~~v~~s~ 115 (299)
T 2wm3_A 64 VIMELALNGAYATFIVTNYWESCSQEQEVKQGKLLADLARRLGLHYVVYSGL 115 (299)
T ss_dssp HHHHHHHTTCSEEEECCCHHHHTCHHHHHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred CCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECC
T ss_conf 0011236775489985777764311255688999999999859967998235
No 119
>1weh_A Conserved hypothetical protein TT1887; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus HB8} SCOP: c.129.1.1
Probab=73.31 E-value=3.9 Score=18.72 Aligned_cols=83 Identities=22% Similarity=0.284 Sum_probs=44.1
Q ss_pred HHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCC-CCCCHH--------HHHHHHHHHHHHHHHH
Q ss_conf 9999726998999980367666740789999999864984999950430-004067--------8888999999999863
Q gi|254781176|r 91 EITEMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPF-HFEGSR--------RMRVAESGIEALQETV 161 (502)
Q Consensus 91 ~i~~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf-~~eg~~--------r~~~a~~~~~~l~~~~ 161 (502)
++-+.|-......++ |||. |.--.+|+-|++.|-.++||..--| ..+... ....-.+=...|-+.+
T Consensus 24 ~lG~~La~~g~~lv~---GGg~--G~M~a~a~ga~~~gg~viGi~~~~~~~~~~~~n~~~~~~i~~~~~~~Rk~~m~~~s 98 (171)
T 1weh_A 24 RYGEVLAEEGFGLAC---GGYQ--GGMEALARGVKAKGGLVVGVTAPAFFPERRGPNPFVDLELPAATLPQRIGRLLDLG 98 (171)
T ss_dssp HHHHHHHHTTEEEEE---CCSS--THHHHHHHHHHHTTCCEEECCCGGGCTTSCSSCTTCSEECCCSSHHHHHHHHHHHE
T ss_pred HHHHHHHHCCCEEEE---CCCH--HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHC
T ss_conf 999999988998998---9954--57799998898658853132112214521256878553100352889989999739
Q ss_pred HHHHHHHHHHHHHHCCCCCHHHHHH
Q ss_conf 3354502788874136653189997
Q gi|254781176|r 162 DTLIVIPNQNLFRIANDKTTFADAF 186 (502)
Q Consensus 162 d~~i~i~n~~l~~~~~~~~~~~~af 186 (502)
|++|++| +--=|+.|.|
T Consensus 99 da~I~lP--------GG~GTL~El~ 115 (171)
T 1weh_A 99 AGYLALP--------GGVGTLAELV 115 (171)
T ss_dssp EEEEECS--------CCHHHHHHHH
T ss_pred CEEEEEC--------CCCCHHHHHH
T ss_conf 9999938--------9721399999
No 120
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=72.61 E-value=0.26 Score=27.47 Aligned_cols=83 Identities=13% Similarity=0.181 Sum_probs=41.1
Q ss_pred CEEEEEEECCCHHHHHHHHHH-CCCCCCEEEEECCC-HHHHHHCCCCEEEEECCCCCCCCC---CCCCHHHHHHHHHHHH
Q ss_conf 617999966814799999998-58998449998255-788551899704851554255678---8888389999999729
Q gi|254781176|r 15 PRITVFGVGGGGGNAVNNMVS-SGLQGVNFVVANTD-AQALMMSKAKQIIQLGSGITEGLG---AGSHPEVGRAAAEECI 89 (502)
Q Consensus 15 ~~i~v~g~gg~g~n~~~~~~~-~~~~~~~~~~~ntd-~~~l~~~~~~~~~~~g~~~~~g~g---~g~~~~~g~~~a~~~~ 89 (502)
-||.|+|-|..|+-.--.|.. .|.+ |.++..+.+ .+++........+.+......+.. .+.-..+ -
T Consensus 3 MkI~ViGaG~~G~~~A~~la~~~G~~-V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------t 73 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVE-VRVLTLFADEAERWTKALGADELTVIVNEKDGTQTEVKSRPKVI--------T 73 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEE-EEEECCSTTHHHHHHHHHTTSCEEEEEECSSSCEEEEEECCSEE--------E
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCE-EEEEECCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCEE--------E
T ss_conf 77999871989999999999669985-89996998999999960545777567677301111002355222--------1
Q ss_pred HHHHHHHCCCCEEEEEE
Q ss_conf 99999726998999980
Q gi|254781176|r 90 DEITEMLDKTHMCFVTA 106 (502)
Q Consensus 90 ~~i~~~~~~~~~~~~~a 106 (502)
..+.++++++|+|||+.
T Consensus 74 ~d~~eal~~aDvVivav 90 (404)
T 3c7a_A 74 KDPEIAISGADVVILTV 90 (404)
T ss_dssp SCHHHHHTTCSEEEECS
T ss_pred CCHHHHHCCCCEEEEEC
T ss_conf 79999962696799806
No 121
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating 1; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=72.28 E-value=4.2 Score=18.49 Aligned_cols=99 Identities=21% Similarity=0.339 Sum_probs=53.2
Q ss_pred CEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCHH---HHHHC--------------------CCCEEEEECCCCCCC
Q ss_conf 6179999668147999999985899844999825578---85518--------------------997048515542556
Q gi|254781176|r 15 PRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDAQ---ALMMS--------------------KAKQIIQLGSGITEG 71 (502)
Q Consensus 15 ~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~~---~l~~~--------------------~~~~~~~~g~~~~~g 71 (502)
-+|-+||+|-.|.|...+|.+.|.+ ..+.|-+.. .|... ..+.+|.+ -++.
T Consensus 11 ~~IG~IGLG~MG~~mA~nL~~~G~~---V~vydrs~~k~~~l~~~~~~~~~~~ga~s~~~~v~~l~~~d~Iil--~vp~- 84 (497)
T 2p4q_A 11 ADFGLIGLAVMGQNLILNAADHGFT---VCAYNRTQSKVDHFLANEAKGKSIIGATSIEDFISKLKRPRKVML--LVKA- 84 (497)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSHHHHHHHHTTTTTSSEECCSSHHHHHHTSCSSCEEEE--CCCS-
T ss_pred CCEEEEEEHHHHHHHHHHHHHCCCE---EEEEECCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCEEEE--ECCC-
T ss_conf 7878982658899999999977994---899949999999999703643466465758889998468998999--7599-
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC-CHHHHHHHHHHHCCCEEEEE
Q ss_conf 7888883899999997299999972699899998036766674-07899999998649849999
Q gi|254781176|r 72 LGAGSHPEVGRAAAEECIDEITEMLDKTHMCFVTAGMGGGTGT-GAAPIIAKIARNKGVLTVGV 134 (502)
Q Consensus 72 ~g~g~~~~~g~~~a~~~~~~i~~~~~~~~~~~~~ag~gggtgt-g~~p~ia~~a~~~~~~~~~~ 134 (502)
| .+..+-.+.+...|+--++++- +||.. ..+--.++.+++.|+..+..
T Consensus 85 ---g-------~~v~~Vi~~L~~~l~~g~IIID-----~sts~~~~s~~~~~~l~~kgi~flda 133 (497)
T 2p4q_A 85 ---G-------APVDALINQIVPLLEKGDIIID-----GGNSHFPDSNRRYEELKKKGILFVGS 133 (497)
T ss_dssp ---S-------HHHHHHHHHHGGGCCTTCEEEE-----CSCCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred ---C-------HHHHHHHHHHHHHCCCCCEEEE-----CCCCCHHHHHHHHHHHHHCCCEEECC
T ss_conf ---4-------8999999999863779998995-----79997689999999987449767344
No 122
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=72.23 E-value=4.2 Score=18.48 Aligned_cols=109 Identities=12% Similarity=0.154 Sum_probs=63.8
Q ss_pred CCCEEEEEEECCC-HHHHHHHHHHCCCCCCEEEEECCCHHHHHHC-CCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 3861799996681-4799999998589984499982557885518-9970485155425567888883899999997299
Q gi|254781176|r 13 LKPRITVFGVGGG-GGNAVNNMVSSGLQGVNFVVANTDAQALMMS-KAKQIIQLGSGITEGLGAGSHPEVGRAAAEECID 90 (502)
Q Consensus 13 ~~~~i~v~g~gg~-g~n~~~~~~~~~~~~~~~~~~ntd~~~l~~~-~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~~~ 90 (502)
-+.||.|+|--|- |...+..+++.|.. ...+++..+....... .....+.++ |. ++.+
T Consensus 17 ~~kkILVtGatG~iG~~lv~~Ll~~g~~-~~v~~~~R~~~~~~~~~~~~~~~~~~-----------D~--------~~~~ 76 (242)
T 2bka_A 17 QNKSVFILGASGETGRVLLKEILEQGLF-SKVTLIGRRKLTFDEEAYKNVNQEVV-----------DF--------EKLD 76 (242)
T ss_dssp TCCEEEEECTTSHHHHHHHHHHHHHTCC-SEEEEEESSCCCCCSGGGGGCEEEEC-----------CG--------GGGG
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCC-CEEEEEECCHHHHCCCCCCCCEEEEE-----------EE--------CCHH
T ss_conf 8996999999849999999999977997-66999536723311101356416997-----------51--------0014
Q ss_pred HHHHHHCCCCEEEEEECCCCCC---------CCCHHHHHHHHHHHCCCEEEEEEECCCCC
Q ss_conf 9999726998999980367666---------74078999999986498499995043000
Q gi|254781176|r 91 EITEMLDKTHMCFVTAGMGGGT---------GTGAAPIIAKIARNKGVLTVGVVTKPFHF 141 (502)
Q Consensus 91 ~i~~~~~~~~~~~~~ag~gggt---------gtg~~p~ia~~a~~~~~~~~~~v~~pf~~ 141 (502)
.+.+.+++.|.||.++|...-- -.-.+--+|++|++.|+=.+-+++.-..+
T Consensus 77 ~~~~~~~~~d~vi~~~~~~~~~~~~~~~~~~n~~~~~~ia~~a~~~gvk~~v~~Ss~~~~ 136 (242)
T 2bka_A 77 DYASAFQGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGAD 136 (242)
T ss_dssp GGGGGGSSCSEEEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCC
T ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCEEEEEEECCCC
T ss_conf 468887641002333222233554420455215678999987875498669999446779
No 123
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=71.74 E-value=2.3 Score=20.43 Aligned_cols=43 Identities=21% Similarity=0.462 Sum_probs=33.2
Q ss_pred CHHHCCCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCHHHHH
Q ss_conf 8454386179999668147999999985899844999825578855
Q gi|254781176|r 9 DITELKPRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDAQALM 54 (502)
Q Consensus 9 ~~~~~~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~~~l~ 54 (502)
+.....|||-+||.|--|.+...++.+.|.. | ++.|-+.....
T Consensus 23 ~~~~~~pKIgiIG~G~MG~~lA~~L~~aG~~-V--~v~dR~~~~~~ 65 (215)
T 2vns_A 23 KVPDEAPKVGILGSGDFARSLATRLVGSGFK-V--VVGSRNPKRTA 65 (215)
T ss_dssp ------CCEEEECCSHHHHHHHHHHHHTTCC-E--EEEESSHHHHH
T ss_pred CCCCCCCCEEEECCCHHHHHHHHHHHHCCCE-E--EEECCCHHHHH
T ss_conf 0788999399985249999999999987997-8--99689888999
No 124
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur protein, oxidoreductase, redox enzyme; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A*
Probab=71.09 E-value=2.4 Score=20.31 Aligned_cols=118 Identities=17% Similarity=0.167 Sum_probs=71.9
Q ss_pred CCCHHHCCCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHCC---CCEEE--EECC-----------CCCC
Q ss_conf 788454386179999668147999999985899844999825578855189---97048--5155-----------4255
Q gi|254781176|r 7 NMDITELKPRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDAQALMMSK---AKQII--QLGS-----------GITE 70 (502)
Q Consensus 7 ~~~~~~~~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~~~l~~~~---~~~~~--~~g~-----------~~~~ 70 (502)
+.++.+.+--+.|||=|.||+-+--...+.|++ |-++ . ...+.+|. |.--| .++. .+.+
T Consensus 11 ~~~~~~~~~DVlVIG~G~AGl~AAi~a~~~g~~-V~lv--~--K~~~~~s~s~~A~GGina~~~~~~~Ds~~~~~~Dt~~ 85 (621)
T 2h88_A 11 QYPVVDHEFDAVVVGAGGAGLRAAFGLSEAGFN-TACV--T--KLFPTRSHTVAAQGGINAALGNMEDDNWRWHFYDTVK 85 (621)
T ss_dssp CSCEEEEEEEEEEECCSHHHHHHHHHHHHTTCC-EEEE--E--SSCGGGSGGGGCCSCEECCCCSSSCCCHHHHHHHHHH
T ss_pred CCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCC-EEEE--E--CCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
T ss_conf 887546506989999539999999999977996-7999--7--8999997679984568610479999999999999999
Q ss_pred CCCCC-CCHHHHHHHHHHHHHHHHHHHCCCCEEE---------------------------EEECCCCCCCCCHHHHHHH
Q ss_conf 67888-8838999999972999999726998999---------------------------9803676667407899999
Q gi|254781176|r 71 GLGAG-SHPEVGRAAAEECIDEITEMLDKTHMCF---------------------------VTAGMGGGTGTGAAPIIAK 122 (502)
Q Consensus 71 g~g~g-~~~~~g~~~a~~~~~~i~~~~~~~~~~~---------------------------~~ag~gggtgtg~~p~ia~ 122 (502)
| |.| +||++-+.-++++.+.|..+.+ -.+-| -+...+..||-...+.+.+
T Consensus 86 ~-g~~l~d~~lv~~l~~~a~~~v~~Le~-~Gv~f~r~~dG~~~~~~~gg~s~~~~~~~~~~R~~~~~d~tG~~i~~~L~~ 163 (621)
T 2h88_A 86 G-SDWLGDQDAIHYMTEQAPAAVIELEN-YGMPFSRTEEGKIYQRAFGGQSLQFGKGGQAHRCCCVADRTGHSLLHTLYG 163 (621)
T ss_dssp H-TTTCSCHHHHHHHHHHHHHHHHHHHH-TTCCCCBCTTSSBCEECCTTCBSTTTTSCBCCCEECSTTCHHHHHHHHHHH
T ss_pred H-HCCCCCHHHHHHHHHHHHHHHHHHHH-CCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCEEEEECCCHHHHHHHHHHH
T ss_conf 6-07877899999999999999999997-599730189987743356763301477875413477458569999999999
Q ss_pred HHHHCCCEE
Q ss_conf 998649849
Q gi|254781176|r 123 IARNKGVLT 131 (502)
Q Consensus 123 ~a~~~~~~~ 131 (502)
.+++.|+.+
T Consensus 164 ~~~~~~v~~ 172 (621)
T 2h88_A 164 RSLRYDTSY 172 (621)
T ss_dssp HHTTSCCEE
T ss_pred HHHHCCCCE
T ss_conf 998515535
No 125
>2nx2_A Hypothetical protein YPSA; structural genomics, unknown function, PSI, protein structure initiative; 2.00A {Bacillus subtilis} SCOP: c.129.1.2
Probab=70.92 E-value=3 Score=19.61 Aligned_cols=108 Identities=14% Similarity=0.094 Sum_probs=61.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHC-CCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHH
Q ss_conf 8838999999972999999726-998999980367666740789999999864984999950430004067888899999
Q gi|254781176|r 76 SHPEVGRAAAEECIDEITEMLD-KTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPFHFEGSRRMRVAESGI 154 (502)
Q Consensus 76 ~~~~~g~~~a~~~~~~i~~~~~-~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf~~eg~~r~~~a~~~~ 154 (502)
-+|.+..- -..=.+.|..+++ |.+ .|| .||-.|.-+=||-++.++.++..-+.+.+| +||.--+.+=..-.++-.
T Consensus 21 ~~~~~~~I-k~~L~~~l~~~~~~G~~-~fi-sg~a~G~D~~aAe~vl~lk~~yp~i~L~~v-lPf~~~~~~w~~~~~~~y 96 (181)
T 2nx2_A 21 DDKALYYI-KKAIKNRLIAFLDEGLE-WIL-ISGQLGVELWAAEAAYDLQEEYPDLKVAVI-TPFYEQEKNWKEPNKEQY 96 (181)
T ss_dssp CCHHHHHH-HHHHHHHHHHHHTTTCC-EEE-ECCCTTHHHHHHHHHHTTTTTCTTCEEEEE-ESSBCTTTTSCHHHHHHH
T ss_pred CCCCHHHH-HHHHHHHHHHHHHCCCC-EEE-ECCCCCHHHHHHHHHHHHHHHCCCCEEEEE-CCHHHHHCCCCHHHHHHH
T ss_conf 87107999-99999999999977995-999-769655999999999997534779549996-042787615999899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
Q ss_conf 99998633354502788874136653189997446799999
Q gi|254781176|r 155 EALQETVDTLIVIPNQNLFRIANDKTTFADAFSMADQVLYS 195 (502)
Q Consensus 155 ~~l~~~~d~~i~i~n~~l~~~~~~~~~~~~af~~~d~~l~~ 195 (502)
.+|...+|-+.++++.. ..-..+|...|+.+..
T Consensus 97 ~~ll~~ad~v~~~~~~~--------~~~~~~~~~rn~~mvd 129 (181)
T 2nx2_A 97 EAVLAQADYEASLTHRP--------YESPLQFKQKNQFFID 129 (181)
T ss_dssp HHHHHHCSEEEESSSSB--------CCCHHHHHHHHHHHHH
T ss_pred HHHHHHCCEEEECCCCC--------CCCHHHHHHHHHHHHH
T ss_conf 99996198899815689--------9999999998199998
No 126
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=70.59 E-value=4.4 Score=18.34 Aligned_cols=184 Identities=15% Similarity=0.190 Sum_probs=90.9
Q ss_pred CEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHH---C--------------CCCEEEEECCCCCCCCCCCCC
Q ss_conf 61799996681479999999858998449998255788551---8--------------997048515542556788888
Q gi|254781176|r 15 PRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDAQALMM---S--------------KAKQIIQLGSGITEGLGAGSH 77 (502)
Q Consensus 15 ~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~~~l~~---~--------------~~~~~~~~g~~~~~g~g~g~~ 77 (502)
=||-+||+|-.|.....++.+.|. +.++.|-+...... . .++.-+.. + .+
T Consensus 8 mkIg~IGlG~MG~~mA~~L~~~G~---~v~v~dr~~~~~~~l~~~g~~~~~~s~~e~~~~~diii~~---v-------~~ 74 (303)
T 3g0o_A 8 FHVGIVGLGSMGMGAARSCLRAGL---STWGADLNPQACANLLAEGACGAAASAREFAGVVDALVIL---V-------VN 74 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC---EEEEECSCHHHHHHHHHTTCSEEESSSTTTTTTCSEEEEC---C-------SS
T ss_pred CEEEEEEHHHHHHHHHHHHHHCCC---EEEEECCCHHHHHHHHHCCCCCCCCCHHHHHHCCCEEEEE---E-------EC
T ss_conf 869998427878999999997899---4899789999999999828964469999998228946888---6-------22
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC-CHHHHHHHHHHHCCCEEEEEEECCCCC------CCHHHH--H
Q ss_conf 3899999997299999972699899998036766674-078999999986498499995043000------406788--8
Q gi|254781176|r 78 PEVGRAAAEECIDEITEMLDKTHMCFVTAGMGGGTGT-GAAPIIAKIARNKGVLTVGVVTKPFHF------EGSRRM--R 148 (502)
Q Consensus 78 ~~~g~~~a~~~~~~i~~~~~~~~~~~~~ag~gggtgt-g~~p~ia~~a~~~~~~~~~~v~~pf~~------eg~~r~--~ 148 (502)
|..-+. .....+.+...+. ..-+||.. .|.+ ..+-.+++.+++.|+--+ .-|... +|.... .
T Consensus 75 ~~~~~~-v~~~~~~~~~~~~-~g~iiid~----sT~~p~~~~~~~~~~~~~g~~~l---dapv~g~~~~a~~g~l~~~~g 145 (303)
T 3g0o_A 75 AAQVRQ-VLFGEDGVAHLMK-PGSAVMVS----STISSADAQEIAAALTALNLNML---DAPVSGGAVKAAQGEMTVMAS 145 (303)
T ss_dssp HHHHHH-HHC--CCCGGGSC-TTCEEEEC----SCCCHHHHHHHHHHHHTTTCEEE---ECCEESCHHHHHTTCEEEEEE
T ss_pred CHHHCC-CCCCCCCCCCCCC-CCCEEEEC----CCCCHHHHHHHHHHHHHCCCCCC---CCCCCCCHHHHHCCCEEEEEC
T ss_conf 022200-0245433100146-76323305----77887888999999985388543---465668545775597046525
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH-HHHHHHHHHCCCCCCCCHHHHHHHHCCCC
Q ss_conf 899999999986333545027888741366531899974467999999-88888765166555589878787641586
Q gi|254781176|r 149 VAESGIEALQETVDTLIVIPNQNLFRIANDKTTFADAFSMADQVLYSG-VSCITDLMIKEGLINLDFADVRSVMRNMG 225 (502)
Q Consensus 149 ~a~~~~~~l~~~~d~~i~i~n~~l~~~~~~~~~~~~af~~~d~~l~~~-v~~i~~~i~~~g~in~df~d~~~v~~~~g 225 (502)
-.++.+++.+....++- .+.+ .+....+...+++++...+..+ +..+.+.+..----.||...+..+|..+.
T Consensus 146 G~~~~~~~~~p~l~~~~----~~~~-~~~g~~g~a~~~Kl~~N~~~~~~~~~~~Eal~la~~~Gid~~~~~~~l~~~~ 218 (303)
T 3g0o_A 146 GSEAAFTRLKPVLDAVA----SNVY-RISDTPGAGSTVKIIHQLLAGVHIAAAAEAMALAARAGIPLDVMYDVVTHAA 218 (303)
T ss_dssp CCHHHHHHHHHHHHHHE----EEEE-EEESSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHTTST
T ss_pred CCHHHHHHCCHHHHHHC----CCEE-EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC
T ss_conf 98899974163899861----8658-7069987889999999999999999999999999984999999999984577
No 127
>1nri_A Hypothetical protein HI0754; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.90A {Haemophilus influenzae} SCOP: c.80.1.3
Probab=70.36 E-value=4.6 Score=18.19 Aligned_cols=114 Identities=18% Similarity=0.249 Sum_probs=64.2
Q ss_pred CCEEEEEEECCCHHHHHHHHHH------CCCCCCEEEEECCCHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 8617999966814799999998------5899844999825578855189970485155425567888883899999997
Q gi|254781176|r 14 KPRITVFGVGGGGGNAVNNMVS------SGLQGVNFVVANTDAQALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAEE 87 (502)
Q Consensus 14 ~~~i~v~g~gg~g~n~~~~~~~------~~~~~~~~~~~ntd~~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~ 87 (502)
.-||.++|.|+.|.-++-.-.+ .....+..+....|..-+.. --++-.+++.|.
T Consensus 71 gGri~~~G~GtSG~la~~~a~e~~~tf~~~~~~~~~~iaggd~al~~~---------------~e~~ed~~~~~~----- 130 (306)
T 1nri_A 71 GGRLIYIGAGTSGRLGVLDASECPPTFGVSTEMVKGIIAGGECAIRHP---------------VEGAEDNTKAVL----- 130 (306)
T ss_dssp TCCEEEEESHHHHHHHHHHHHHHHHHHCCCTTSEEEEETTCTHHHHSC---------------CTTGGGCTTHHH-----
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCCCCCHHHCCHHCCCCCHHHHHH---------------HHHCCCCHHHHH-----
T ss_conf 985999768723999999999864656898221300026793887656---------------651246488999-----
Q ss_pred HHHHHHH-HHCCCCEEEEEECCCCCCCCCHHHHH---HHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 2999999-72699899998036766674078999---9999864984999950430004067888899999999986333
Q gi|254781176|r 88 CIDEITE-MLDKTHMCFVTAGMGGGTGTGAAPII---AKIARNKGVLTVGVVTKPFHFEGSRRMRVAESGIEALQETVDT 163 (502)
Q Consensus 88 ~~~~i~~-~~~~~~~~~~~ag~gggtgtg~~p~i---a~~a~~~~~~~~~~v~~pf~~eg~~r~~~a~~~~~~l~~~~d~ 163 (502)
..++. .+.--|+|+.+.. +|-+|.+ .+.||+.|+.|++++.-|=+ .+.+.+|-
T Consensus 131 --~~~~~~~i~~~DvvI~IS~------SG~tp~vi~al~~Ak~~G~~ti~it~~~~s---------------~l~~~ad~ 187 (306)
T 1nri_A 131 --NDLQSIHFSKNDVLVGIAA------SGRTPYVIAGLQYAKSLGALTISIASNPKS---------------EMAEIADI 187 (306)
T ss_dssp --HHHHHTTCCTTSEEEEECT------TSCCHHHHHHHHHHHHHTCEEEEEESSTTC---------------HHHHHSSE
T ss_pred --HHHHHHCCCCCCEEEEEEC------CCCCHHHHHHHHHHHHCCCCEEEEECCCCC---------------CCCHHCCE
T ss_conf --9999957998884899968------999645799999999726866999768875---------------10021776
Q ss_pred HHHHHHH
Q ss_conf 5450278
Q gi|254781176|r 164 LIVIPNQ 170 (502)
Q Consensus 164 ~i~i~n~ 170 (502)
.|.++-.
T Consensus 188 ~I~~~~g 194 (306)
T 1nri_A 188 AIETIVG 194 (306)
T ss_dssp EEECCCC
T ss_pred EEECCCC
T ss_conf 7854889
No 128
>1wde_A Probable diphthine synthase; structural genomics, conserved hypothetical protein, riken structural genomics/proteomics initiative, RSGI; 2.00A {Aeropyrum pernix} SCOP: c.90.1.1
Probab=70.14 E-value=4.6 Score=18.16 Aligned_cols=82 Identities=28% Similarity=0.172 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEE-----------------------EEEECC
Q ss_conf 999997299999972699899998036766674078999999986498499-----------------------995043
Q gi|254781176|r 82 RAAAEECIDEITEMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTV-----------------------GVVTKP 138 (502)
Q Consensus 82 ~~~a~~~~~~i~~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~-----------------------~~v~~p 138 (502)
+...++..++|.+..++-++||+++|.-.--+|+..- ...+++.|+-+- ..+|+|
T Consensus 67 ~~~~e~~~~~i~~~a~~~~Vv~L~~GDP~i~~t~~~l--~~~~~~~gi~vevIPGiSs~~aa~a~~Gl~~~~fg~~~sl~ 144 (294)
T 1wde_A 67 RRDLEERSREIVSRALDAVVAVVTAGDPMVATTHSSL--AAEALEAGVAVRYIPGVSGVQAARGATMLSFYRFGGTVTLP 144 (294)
T ss_dssp HHHHHTSHHHHTCCSSCCEEEEEESBCTTSSSSHHHH--HHHHHHTTCEEEEECCCCHHHHHHHHHTCCGGGEEEEEEEC
T ss_pred CCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHH--HHHHHHCCCCEEEECCHHHHHHHHHHHCCCCCCCCEEEEEE
T ss_conf 4139999999999855798799967999876718999--99999889978997887899999999589845684589997
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 000406788889999999998633354
Q gi|254781176|r 139 FHFEGSRRMRVAESGIEALQETVDTLI 165 (502)
Q Consensus 139 f~~eg~~r~~~a~~~~~~l~~~~d~~i 165 (502)
|.+++..-...-+.-...++...+|++
T Consensus 145 ~~~~~~~p~s~~~~i~~~~~~~~~Tlv 171 (294)
T 1wde_A 145 GPWRGVTPISVARRIYLNLCAGLHTTA 171 (294)
T ss_dssp CGGGCCCCHHHHHHHHHHHHHTCEEEE
T ss_pred EECCCCCCCCHHHHHHHHHHCCCCEEE
T ss_conf 425886789888999999977997366
No 129
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=70.02 E-value=4.7 Score=18.14 Aligned_cols=39 Identities=26% Similarity=0.295 Sum_probs=28.9
Q ss_pred CCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHH
Q ss_conf 861799996681479999999858998449998255788551
Q gi|254781176|r 14 KPRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDAQALMM 55 (502)
Q Consensus 14 ~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~~~l~~ 55 (502)
.++|.|||.|--|+-.--+|.+.|.. |.++. .+.+++..
T Consensus 4 ~~~iaViG~GaiG~~~A~~La~~G~~-V~~~~--r~~~~~~~ 42 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALKGQS-VLAWD--IDAQRIKE 42 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCE-EEEEC--SCHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCE-EEEEE--CCHHHHHH
T ss_conf 99599988798999999999978994-89998--99999999
No 130
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative; 2.19A {Bacteroides fragilis nctc 9343}
Probab=69.95 E-value=2.2 Score=20.50 Aligned_cols=77 Identities=18% Similarity=0.226 Sum_probs=43.6
Q ss_pred CEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHC----CCC------------EEEEECCCCCCCCCCCCCH
Q ss_conf 617999966814799999998589984499982557885518----997------------0485155425567888883
Q gi|254781176|r 15 PRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDAQALMMS----KAK------------QIIQLGSGITEGLGAGSHP 78 (502)
Q Consensus 15 ~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~~~l~~~----~~~------------~~~~~g~~~~~g~g~g~~~ 78 (502)
-+|.+||.|--|...+..+.+.|+. |.. ..|.+...+... .+. .-+.|-. .|
T Consensus 11 ~~I~iIG~G~mG~~la~~L~~~g~~-v~~-v~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~divilav----------~~ 78 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRKGFR-IVQ-VYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYIVSL----------KD 78 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCC-EEE-EECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEEECC----------CH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCC-EEE-EECCCHHHHHHHHHHCCCEEECCHHHHHCCCCCEEEEC----------CH
T ss_conf 9199983309999999999988996-799-97899999999998769838657788630355358845----------78
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCEEEEEEC
Q ss_conf 89999999729999997269989999803
Q gi|254781176|r 79 EVGRAAAEECIDEITEMLDKTHMCFVTAG 107 (502)
Q Consensus 79 ~~g~~~a~~~~~~i~~~~~~~~~~~~~ag 107 (502)
.+..+-..+|...+....+++.++|
T Consensus 79 ----~~i~~v~~~l~~~~~~~~ii~~~s~ 103 (266)
T 3d1l_A 79 ----SAFAELLQGIVEGKREEALMVHTAG 103 (266)
T ss_dssp ----HHHHHHHHHHHTTCCTTCEEEECCT
T ss_pred ----HHHHHHHHHHHHHCCCCCEEEEECC
T ss_conf ----8899999999974464547886168
No 131
>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCSG, PSI-2, midwest center for structural genomics; 2.00A {Thermoplasma acidophilum}
Probab=69.35 E-value=4.8 Score=18.04 Aligned_cols=37 Identities=14% Similarity=0.060 Sum_probs=23.3
Q ss_pred HHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHH
Q ss_conf 9999997269989999803676667407899999998
Q gi|254781176|r 89 IDEITEMLDKTHMCFVTAGMGGGTGTGAAPIIAKIAR 125 (502)
Q Consensus 89 ~~~i~~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~ 125 (502)
.+.++.+++.+|+||.|.|+|-|.----..++|+...
T Consensus 53 ~~~l~~~~~~~d~vittGGlGpt~dD~T~~~va~~lg 89 (172)
T 3kbq_A 53 GWAFRVALEVSDLVVSSGGLGPTFDDMTVEGFAKCIG 89 (172)
T ss_dssp HHHHHHHHHHCSEEEEESCCSSSTTCCHHHHHHHHHT
T ss_pred HHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHC
T ss_conf 9999998734889998178867875409999999809
No 132
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=68.87 E-value=4.9 Score=17.97 Aligned_cols=94 Identities=20% Similarity=0.332 Sum_probs=58.8
Q ss_pred CCEEEEEEECCCHHHHHHHHHHCCCCCCEEEE-ECCCHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 86179999668147999999985899844999-82557885518997048515542556788888389999999729999
Q gi|254781176|r 14 KPRITVFGVGGGGGNAVNNMVSSGLQGVNFVV-ANTDAQALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAEECIDEI 92 (502)
Q Consensus 14 ~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~-~ntd~~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~~~~i 92 (502)
+.||-|||+|.-|-...-..+.. ..++++++ ++.|...+...-...++ ....
T Consensus 7 ~irvgiIG~G~~g~~~~~~~l~~-~~~~~lvav~d~~~~~~~~~~~~~~~--------------------------~~~~ 59 (364)
T 3e82_A 7 TINIALIGYGFVGKTFHAPLIRS-VPGLNLAFVASRDEEKVKRDLPDVTV--------------------------IASP 59 (364)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHT-STTEEEEEEECSCHHHHHHHCTTSEE--------------------------ESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHH-CCCCEEEEEECCCHHHHHHHCCCCCE--------------------------ECCH
T ss_conf 88599994819999999999971-98958999988989999964779975--------------------------7999
Q ss_pred HHHHC--CCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCC
Q ss_conf 99726--998999980367666740789999999864984999950430004
Q gi|254781176|r 93 TEMLD--KTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPFHFE 142 (502)
Q Consensus 93 ~~~~~--~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf~~e 142 (502)
.++|. +.|.|+|+ |-+..-.-++..|-+.|.- .++.+|+..-
T Consensus 60 ~ell~~~~iD~V~I~------tp~~~H~~~~~~al~~gkh--V~~EKPla~~ 103 (364)
T 3e82_A 60 EAAVQHPDVDLVVIA------SPNATHAPLARLALNAGKH--VVVDKPFTLD 103 (364)
T ss_dssp HHHHTCTTCSEEEEC------SCGGGHHHHHHHHHHTTCE--EEECSCSCSS
T ss_pred HHHHCCCCCCEEEEC------CCHHHHHHHHHHHHHCCCC--CHHCCCCCCC
T ss_conf 999559999989982------8778867888899864995--4102874110
No 133
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=68.85 E-value=4.3 Score=18.40 Aligned_cols=39 Identities=21% Similarity=0.321 Sum_probs=28.7
Q ss_pred EEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHH
Q ss_conf 1799996681479999999858998449998255788551
Q gi|254781176|r 16 RITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDAQALMM 55 (502)
Q Consensus 16 ~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~~~l~~ 55 (502)
||.|+|-|--|+-.-..+.+.+-+ |.++.-..|.+++..
T Consensus 2 kI~ViGaGa~GtAlA~~la~~g~~-V~l~~r~~~~~~~~~ 40 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNE-VRIWGTEFDTEILKS 40 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCE-EEEECCGGGHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCE-EEEEEECCCHHHHHH
T ss_conf 899999589999999999978995-899973788999999
No 134
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=68.18 E-value=5.1 Score=17.88 Aligned_cols=97 Identities=15% Similarity=0.257 Sum_probs=64.0
Q ss_pred EEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHCCC--CEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 1799996681479999999858998449998255788551899--70485155425567888883899999997299999
Q gi|254781176|r 16 RITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDAQALMMSKA--KQIIQLGSGITEGLGAGSHPEVGRAAAEECIDEIT 93 (502)
Q Consensus 16 ~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~~~l~~~~~--~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~~~~i~ 93 (502)
||-|+|.|--|......|...+ .++++++.|.+.+..... ...+..|. +.+|++=+++
T Consensus 6 ~ViI~G~G~~G~~la~~L~~~g---~~v~vId~d~~~~~~~~~~~~~~vi~gd--------~~~~~~L~~a--------- 65 (140)
T 1lss_A 6 YIIIAGIGRVGYTLAKSLSEKG---HDIVLIDIDKDICKKASAEIDALVINGD--------CTKIKTLEDA--------- 65 (140)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHCSSEEEESC--------TTSHHHHHHT---------
T ss_pred EEEEECCCHHHHHHHHHHHHCC---CCEEEEEECHHHHHHHHHCCCCEEEECC--------CCHHHHHHHC---------
T ss_conf 9999998999999999999779---9589985015665544531474599887--------6157778745---------
Q ss_pred HHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCE-EEEEEECC
Q ss_conf 9726998999980367666740789999999864984-99995043
Q gi|254781176|r 94 EMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVL-TVGVVTKP 138 (502)
Q Consensus 94 ~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~-~~~~v~~p 138 (502)
-++.++.|+++.. --...-.++.+||+++.- +++.+.-|
T Consensus 66 -~i~~a~~vi~~t~-----~d~~Ni~~~~~ak~~~~~~iia~~~~~ 105 (140)
T 1lss_A 66 -GIEDADMYIAVTG-----KEEVNLMSSLLAKSYGINKTIARISEI 105 (140)
T ss_dssp -TTTTCSEEEECCS-----CHHHHHHHHHHHHHTTCCCEEEECSST
T ss_pred -CCCCCCEEEEEEC-----CHHHHHHHHHHHHHCCCCCEEEEECCH
T ss_conf -9130388999508-----677789999999982999489998588
No 135
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=67.75 E-value=5.2 Score=17.82 Aligned_cols=95 Identities=16% Similarity=0.193 Sum_probs=61.4
Q ss_pred CEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHC-CCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 617999966814799999998589984499982557885518-9970485155425567888883899999997299999
Q gi|254781176|r 15 PRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDAQALMMS-KAKQIIQLGSGITEGLGAGSHPEVGRAAAEECIDEIT 93 (502)
Q Consensus 15 ~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~~~l~~~-~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~~~~i~ 93 (502)
.||-|+|.|--|..+...|... |+++++++.|.+..... ....++..| -+.+|++=++|
T Consensus 5 mhVII~G~Gr~G~~va~~L~~~---g~~vvvID~d~~~v~~l~~~g~~vi~G--------Dat~~~~L~~A--------- 64 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSS---GVKMVVLDHDPDHIETLRKFGMKVFYG--------DATRMDLLESA--------- 64 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT---TCCEEEEECCHHHHHHHHHTTCCCEES--------CTTCHHHHHHT---------
T ss_pred CEEEEECCCHHHHHHHHHHHHC---CCCEEEEECCHHHHHHHHHCCCCEEEE--------CCCCHHHHHHC---------
T ss_conf 9699989888999999999968---998899989999999999779909996--------38999999856---------
Q ss_pred HHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHC--CCEEEEEE
Q ss_conf 9726998999980367666740789999999864--98499995
Q gi|254781176|r 94 EMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNK--GVLTVGVV 135 (502)
Q Consensus 94 ~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~--~~~~~~~v 135 (502)
-++.+++|+++.+ -.-..-.++..||++ .+-+++-+
T Consensus 65 -gi~~A~~vIia~~-----d~~~n~~i~~~ar~~~p~~~Iiara 102 (413)
T 3l9w_A 65 -GAAKAEVLINAID-----DPQTNLQLTEMVKEHFPHLQIIARA 102 (413)
T ss_dssp -TTTTCSEEEECCS-----SHHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred -CCCCCCEEEEEEC-----CHHHHHHHHHHHHHHCCCCEEEEEE
T ss_conf -9775999999719-----8899999999999978998399997
No 136
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase family, NAD-binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum ms-1}
Probab=67.39 E-value=5.2 Score=17.77 Aligned_cols=92 Identities=17% Similarity=0.269 Sum_probs=61.0
Q ss_pred CCCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEE-CCCHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 3861799996681479999999858998449998-255788551899704851554255678888838999999972999
Q gi|254781176|r 13 LKPRITVFGVGGGGGNAVNNMVSSGLQGVNFVVA-NTDAQALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAEECIDE 91 (502)
Q Consensus 13 ~~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~-ntd~~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~~~~ 91 (502)
-+.|+-+||.|.-|.+-+..+... .+++++++ +.|...+.+.....++- .+
T Consensus 9 ~~irv~iiG~G~~g~~h~~~~~~~--~~~eiv~v~d~~~~~~~~~~~~~~~~-----------------------~~--- 60 (315)
T 3c1a_A 9 SPVRLALIGAGRWGKNYIRTIAGL--PGAALVRLASSNPDNLALVPPGCVIE-----------------------SD--- 60 (315)
T ss_dssp CCEEEEEEECTTTTTTHHHHHHHC--TTEEEEEEEESCHHHHTTCCTTCEEE-----------------------SS---
T ss_pred CCEEEEEECCCHHHHHHHHHHHHC--CCCEEEEEECCCHHHHHHHCCCCCCC-----------------------CC---
T ss_conf 993899999939999999999718--99489999879999999753579735-----------------------99---
Q ss_pred HHHHHC--CCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCC
Q ss_conf 999726--9989999803676667407899999998649849999504300
Q gi|254781176|r 92 ITEMLD--KTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPFH 140 (502)
Q Consensus 92 i~~~~~--~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf~ 140 (502)
+.++|+ +.|.|||. |=...-.-+++.|=+.|.- .++-+|+.
T Consensus 61 ~~ell~~~~~D~V~I~------tp~~~H~~~~~~al~~gk~--V~~EKPl~ 103 (315)
T 3c1a_A 61 WRSVVSAPEVEAVIIA------TPPATHAEITLAAIASGKA--VLVEKPLT 103 (315)
T ss_dssp THHHHTCTTCCEEEEE------SCGGGHHHHHHHHHHTTCE--EEEESSSC
T ss_pred HHHHHCCCCCCEEEEC------CCHHHHHHHHHHHHHHCCC--HHCCCCCC
T ss_conf 9999559999989992------8788879999999961322--11389821
No 137
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=67.12 E-value=5.3 Score=17.73 Aligned_cols=101 Identities=18% Similarity=0.178 Sum_probs=60.8
Q ss_pred CCCEEEEEE-ECCCHHHHHHHHHHCCCCCCEEEEECCC-------HHHHHHC-CCCEEEEECCCCCCCCCCCCCHHHHHH
Q ss_conf 386179999-6681479999999858998449998255-------7885518-997048515542556788888389999
Q gi|254781176|r 13 LKPRITVFG-VGGGGGNAVNNMVSSGLQGVNFVVANTD-------AQALMMS-KAKQIIQLGSGITEGLGAGSHPEVGRA 83 (502)
Q Consensus 13 ~~~~i~v~g-~gg~g~n~~~~~~~~~~~~~~~~~~ntd-------~~~l~~~-~~~~~~~~g~~~~~g~g~g~~~~~g~~ 83 (502)
-|.||.|+| -|--|.+.++++.+.|.+ |..+.-+.. .+.+... .....+.-| |.
T Consensus 3 ~k~kILVtGatG~iG~~lv~~Ll~~g~~-V~~l~R~~~~~~~~~~~~~~~~l~~~gv~v~~~-----------D~----- 65 (308)
T 1qyc_A 3 SRSRILLIGATGYIGRHVAKASLDLGHP-TFLLVRESTASSNSEKAQLLESFKASGANIVHG-----------SI----- 65 (308)
T ss_dssp CCCCEEEESTTSTTHHHHHHHHHHTTCC-EEEECCCCCTTTTHHHHHHHHHHHTTTCEEECC-----------CT-----
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEE-----------EC-----
T ss_conf 9997999898838999999999978896-999988886555677777777650389589996-----------46-----
Q ss_pred HHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEE
Q ss_conf 99972999999726998999980367666740789999999864984999950
Q gi|254781176|r 84 AAEECIDEITEMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVT 136 (502)
Q Consensus 84 ~a~~~~~~i~~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~ 136 (502)
.+.+.+.++++++|.||-+++ .+......-+.+.|+..|+.-+.+.+
T Consensus 66 ---~d~~~l~~a~~~~d~v~~~~~---~~~~~~~~~l~~a~~~~g~~~~~~~s 112 (308)
T 1qyc_A 66 ---DDHASLVEAVKNVDVVISTVG---SLQIESQVNIIKAIKEVGTVKRFFPS 112 (308)
T ss_dssp ---TCHHHHHHHHHTCSEEEECCC---GGGSGGGHHHHHHHHHHCCCSEEECS
T ss_pred ---CCHHHHHHHHHHCEEEEECCC---CCCCCCCCHHHHHHHHCCCEEEEEEE
T ss_conf ---543556887520415763256---53233420688999973965999642
No 138
>3b9q_A Chloroplast SRP receptor homolog, alpha subunit CPFTSY; protein translocation, GTP-binding, nucleotide-binding, protein transport; 1.75A {Arabidopsis thaliana}
Probab=67.07 E-value=5.3 Score=17.72 Aligned_cols=46 Identities=20% Similarity=0.267 Sum_probs=29.0
Q ss_pred CCCCCCCHHHHHHHHHHH---CCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 766674078999999986---49849999504300040678888999999999863335
Q gi|254781176|r 109 GGGTGTGAAPIIAKIARN---KGVLTVGVVTKPFHFEGSRRMRVAESGIEALQETVDTL 164 (502)
Q Consensus 109 gggtgtg~~p~ia~~a~~---~~~~~~~~v~~pf~~eg~~r~~~a~~~~~~l~~~~d~~ 164 (502)
=|-+|+|=+-.+||+|.. .|- .|++|+.=.. | -.+++.|+.+++-+
T Consensus 106 vG~~G~GKTTTiaKLA~~~~~~~~-kv~lva~Dt~-----R----~aA~eQL~~~a~~~ 154 (302)
T 3b9q_A 106 VGVNGGGKTTSLGKLAHRLKNEGT-KVLMAAGDTF-----R----AAASDQLEIWAERT 154 (302)
T ss_dssp ECCTTSCHHHHHHHHHHHHHHTTC-CEEEECCCCS-----C----HHHHHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHHHHHHCCC-CCCEECCCCC-----C----HHHHHHHHHHHHHC
T ss_conf 579888677499999999997699-8732115657-----8----77999999998642
No 139
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=66.46 E-value=5.5 Score=17.64 Aligned_cols=100 Identities=12% Similarity=0.139 Sum_probs=65.5
Q ss_pred HCCCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHC-CCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 438617999966814799999998589984499982557885518-9970485155425567888883899999997299
Q gi|254781176|r 12 ELKPRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDAQALMMS-KAKQIIQLGSGITEGLGAGSHPEVGRAAAEECID 90 (502)
Q Consensus 12 ~~~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~~~l~~~-~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~~~ 90 (502)
+.+-+|-|+|.|.-|-+.+..|.+.| .+++++..|....... .....+..| -+.+|++
T Consensus 4 ~~~~hivIiG~g~~g~~la~~L~~~g---~~vvvid~d~~~~~~~~~~~~~~~~g--------d~~~~~~---------- 62 (141)
T 3llv_A 4 NGRYEYIVIGSEAAGVGLVRELTAAG---KKVLAVDKSKEKIELLEDEGFDAVIA--------DPTDESF---------- 62 (141)
T ss_dssp --CCSEEEECCSHHHHHHHHHHHHTT---CCEEEEESCHHHHHHHHHTTCEEEEC--------CTTCHHH----------
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCC---CCEEEEECCHHHHHHHHHCCCEEEEE--------CCCCHHH----------
T ss_conf 88798999898989999999999779---94899957199999998459729993--------4678888----------
Q ss_pred HHHH-HHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCE-EEEEEECC
Q ss_conf 9999-726998999980367666740789999999864984-99995043
Q gi|254781176|r 91 EITE-MLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVL-TVGVVTKP 138 (502)
Q Consensus 91 ~i~~-~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~-~~~~v~~p 138 (502)
+++ -+..+++|+++.+= .-..-.++..+|++|.. +++.++-|
T Consensus 63 -L~~~~i~~a~~vi~~~~~-----d~~n~~~~~~~k~~~~~~ii~~~~~~ 106 (141)
T 3llv_A 63 -YRSLDLEGVSAVLITGSD-----DEFNLKILKALRSVSDVYAIVRVSSP 106 (141)
T ss_dssp -HHHSCCTTCSEEEECCSC-----HHHHHHHHHHHHHHCCCCEEEEESCG
T ss_pred -HHHHHHHCCCEEEEEECC-----CHHHHHHHHHHHHCCCCCEEEEECCH
T ss_conf -866667238899998188-----09999999999855899889998698
No 140
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with cofactor and product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=66.29 E-value=5.5 Score=17.62 Aligned_cols=108 Identities=15% Similarity=0.193 Sum_probs=59.7
Q ss_pred EEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHH------
Q ss_conf 17999966814799999998589984499982557885518997048515542556788888389999999729------
Q gi|254781176|r 16 RITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDAQALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAEECI------ 89 (502)
Q Consensus 16 ~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~~------ 89 (502)
||.|||.|=-|.-.--.+...| -+.+++++|..-+...+.. ++.+ .+|.+.+.-. ...
T Consensus 2 kI~ViGlGyVGl~~a~~la~~G---~~V~g~D~d~~~i~~ln~g-~~p~-----------~Ep~l~~~l~-~~~~~~~l~ 65 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARG---HEVIGVDVSSTKIDLINQG-KSPI-----------VEPGLEALLQ-QGRQTGRLS 65 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTT---CEEEEECSCHHHHHHHHTT-CCSS-----------CCTTHHHHHH-HHHHTTCEE
T ss_pred EEEEECCCHHHHHHHHHHHHCC---CCEEEEECCHHHHHHHHCC-CCCC-----------CCCCHHHHHH-HHHHCCCEE
T ss_conf 7999896778999999999489---9789998999999999879-8996-----------7989999999-988639869
Q ss_pred --HHHHHHHCCCCEEEEEECCCC----CCCCC----HHHHHHHHHHHC--CCEEEEEEECCC
Q ss_conf --999997269989999803676----66740----789999999864--984999950430
Q gi|254781176|r 90 --DEITEMLDKTHMCFVTAGMGG----GTGTG----AAPIIAKIARNK--GVLTVGVVTKPF 139 (502)
Q Consensus 90 --~~i~~~~~~~~~~~~~ag~gg----gtgtg----~~p~ia~~a~~~--~~~~~~~v~~pf 139 (502)
..+.+.+.++|++||+-+.-- -.... +.-.++++.+.. +.++|-==|.|-
T Consensus 66 ~t~d~~~~i~~~dvi~I~VpTP~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~lvii~STv~P 127 (436)
T 1mv8_A 66 GTTDFKKAVLDSDVSFICVGTPSKKNGDLDLGYIETVCREIGFAIREKSERHTVVVRSTVLP 127 (436)
T ss_dssp EESCHHHHHHTCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHTTCCSCCEEEECSCCCT
T ss_pred EECCHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCC
T ss_conf 98477897620898999838884346765652233200013455540467735642136699
No 141
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=66.28 E-value=5.5 Score=17.62 Aligned_cols=161 Identities=18% Similarity=0.267 Sum_probs=78.2
Q ss_pred EEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHH---------
Q ss_conf 17999966814799999998589984499982557885518997048515542556788888389999999---------
Q gi|254781176|r 16 RITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDAQALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAE--------- 86 (502)
Q Consensus 16 ~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~--------- 86 (502)
||.++|-..-|..++..+++.|.. |..+....|......... .+.+.|.+
T Consensus 2 ki~~~g~~~~~~~~l~~L~~~~~~-i~~V~t~~d~~~~~~~~~--------------------~v~~~a~~~~i~~~~~~ 60 (660)
T 1z7e_A 2 KTVVFAYHDMGCLGIEALLAAGYE-ISAIFTHTDNPGEKAFYG--------------------SVARLAAERGIPVYAPD 60 (660)
T ss_dssp EEEEEECHHHHHHHHHHHHHTTCE-EEEEECCCC--------C--------------------CHHHHHHHHTCCEECCS
T ss_pred EEEEEECCHHHHHHHHHHHHCCCC-EEEEECCCCCCCCCCCCC--------------------HHHHHHHHCCCCEECCC
T ss_conf 599990768999999999978997-899983899997767888--------------------79999998799788469
Q ss_pred -----HHHHHHHHHHCCCCEEEEEECCCC------------C----------CCCCHHHHHHHHHHHC------------
Q ss_conf -----729999997269989999803676------------6----------6740789999999864------------
Q gi|254781176|r 87 -----ECIDEITEMLDKTHMCFVTAGMGG------------G----------TGTGAAPIIAKIARNK------------ 127 (502)
Q Consensus 87 -----~~~~~i~~~~~~~~~~~~~ag~gg------------g----------tgtg~~p~ia~~a~~~------------ 127 (502)
+..+.|++. +.|++|+++ .|- | ..-|++|+.--|...-
T Consensus 61 ~~~~~~~~~~l~~~--~~D~~~~~~-~~~ii~~~~l~~~~~g~iN~H~slLP~~RG~~p~~wai~~g~~~~gvt~~~~~~ 137 (660)
T 1z7e_A 61 NVNHPLWVERIAQL--SPDVIFSFY-YRHLIYDEILQLAPAGAFNLHGSLLPKYRGRAPLNWVLVNGETETGVTLHRMVK 137 (660)
T ss_dssp CTTSHHHHHHHHHH--CCSEEEEES-CCSCCCHHHHTTCTTCEEEEESSSTTTTCSSCHHHHHHHTTCSEEEEEEEECCS
T ss_pred CCCCHHHHHHHHHC--CCCEEEEEH-HHHHCCHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHCCCCCEEEEEEEECC
T ss_conf 89989999999845--989999832-222459999815888889988875756678178999998699803269999547
Q ss_pred ----CCEEEEEEECCC---CCCCHHHHHHHHHHHHHHHHHHHHHHH-----HHH-HHHHHHCCCCCHHHHH---HHHHHH
Q ss_conf ----984999950430---004067888899999999986333545-----027-8887413665318999---744679
Q gi|254781176|r 128 ----GVLTVGVVTKPF---HFEGSRRMRVAESGIEALQETVDTLIV-----IPN-QNLFRIANDKTTFADA---FSMADQ 191 (502)
Q Consensus 128 ----~~~~~~~v~~pf---~~eg~~r~~~a~~~~~~l~~~~d~~i~-----i~n-~~l~~~~~~~~~~~~a---f~~~d~ 191 (502)
|-+ ++-...|. ..-.....+.+..|..-|.+..+.+.- +|- +.... |-++.+-.++ |...-.
T Consensus 138 ~~D~G~I-~~q~~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~~~~t-y~~k~~~~d~~i~w~~~~~ 215 (660)
T 1z7e_A 138 RADAGAI-VAQLRIAIAPDDIAITLHHKLCHAARQLLEQTLPAIKHGNILEIAQRENEAT-CFGRRTPDDSFLEWHKPAS 215 (660)
T ss_dssp STTTSCE-EEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCBCCCGGGCC-CCCCCCGGGGBCCTTSBHH
T ss_pred CCCCCCC-CEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCE-ECCCCCHHHHCCCCCCCHH
T ss_conf 8766760-1366035688777999999999999999999999997699872158998766-7889997990905457799
Q ss_pred HHHHHHHHHHH
Q ss_conf 99999888887
Q gi|254781176|r 192 VLYSGVSCITD 202 (502)
Q Consensus 192 ~l~~~v~~i~~ 202 (502)
.+.+-|++.+.
T Consensus 216 ~i~~~ira~~~ 226 (660)
T 1z7e_A 216 VLHNMVRAVAD 226 (660)
T ss_dssp HHHHHHHHTCT
T ss_pred HHHHHHHCCCC
T ss_conf 99999867579
No 142
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium LT2}
Probab=65.99 E-value=5.6 Score=17.58 Aligned_cols=103 Identities=15% Similarity=0.244 Sum_probs=66.3
Q ss_pred CCCCCHHHCCCEEEEEEECCCHHHHHHHHHHCCCCCCEEEE-ECCCHHHHHHC----CCCEEEEECCCCCCCCCCCCCHH
Q ss_conf 55788454386179999668147999999985899844999-82557885518----99704851554255678888838
Q gi|254781176|r 5 NANMDITELKPRITVFGVGGGGGNAVNNMVSSGLQGVNFVV-ANTDAQALMMS----KAKQIIQLGSGITEGLGAGSHPE 79 (502)
Q Consensus 5 ~~~~~~~~~~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~-~ntd~~~l~~~----~~~~~~~~g~~~~~g~g~g~~~~ 79 (502)
..|+.++.-+-||-|||.|.-|-..+..+.. ...++++++ ++.+...+... ..+.+.
T Consensus 14 ~~~~~~~~m~lrigIIG~G~ig~~h~~~~~~-~~~~~~lvav~d~~~~~a~~~a~~~~~~~~~----------------- 75 (357)
T 3ec7_A 14 RENLYFQGMTLKAGIVGIGMIGSDHLRRLAN-TVSGVEVVAVCDIVAGRAQAALDKYAIEAKD----------------- 75 (357)
T ss_dssp --------CCEEEEEECCSHHHHHHHHHHHH-TCTTEEEEEEECSSTTHHHHHHHHHTCCCEE-----------------
T ss_pred HHHCCCCCCCEEEEEECCHHHHHHHHHHHHH-CCCCCEEEEEECCCHHHHHHHHHHHCCCCCC-----------------
T ss_conf 2102307993149999984999999999984-6999789999789999999999983999831-----------------
Q ss_pred HHHHHHHHHHHHHHHHHC--CCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCC
Q ss_conf 999999972999999726--998999980367666740789999999864984999950430004
Q gi|254781176|r 80 VGRAAAEECIDEITEMLD--KTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPFHFE 142 (502)
Q Consensus 80 ~g~~~a~~~~~~i~~~~~--~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf~~e 142 (502)
.+.+.++|+ +.|.|+|+ |-+..-.-+++.|-+.|.- .++-+|+..-
T Consensus 76 ---------y~~~~ell~~~~iDaV~I~------Tp~~~H~~~~~~al~~Gkh--Vl~EKPla~~ 123 (357)
T 3ec7_A 76 ---------YNDYHDLINDKDVEVVIIT------ASNEAHADVAVAALNANKY--VFCEKPLAVT 123 (357)
T ss_dssp ---------ESSHHHHHHCTTCCEEEEC------SCGGGHHHHHHHHHHTTCE--EEEESSSCSS
T ss_pred ---------CCCHHHHHCCCCCCEEEEC------CCCCCCHHHHHHHHHCCCE--EEECCCCHHH
T ss_conf ---------1999999659998889988------9850000457889851776--9975881355
No 143
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structural genomics; 2.00A {Ralstonia solanacearum MOLK2}
Probab=65.56 E-value=2.9 Score=19.69 Aligned_cols=41 Identities=27% Similarity=0.436 Sum_probs=31.1
Q ss_pred CCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHH
Q ss_conf 861799996681479999999858998449998255788551
Q gi|254781176|r 14 KPRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDAQALMM 55 (502)
Q Consensus 14 ~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~~~l~~ 55 (502)
.+||.|+|.|+-|+=.-.+|.+.| ..|.|++-.-....+.+
T Consensus 3 m~KI~IiGaGaiG~~~A~~L~~~G-~~Vtlv~R~~~~~~i~~ 43 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAG-EAINVLARGATLQALQT 43 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTT-CCEEEECCHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC-CCEEEEEEHHHHHHHHH
T ss_conf 888999887799999999999689-90899975899999998
No 144
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=64.88 E-value=5.8 Score=17.43 Aligned_cols=92 Identities=17% Similarity=0.132 Sum_probs=59.1
Q ss_pred CCCEEEEEEECCCHHHHHHHHHHCCCCCCEEEE-ECCCHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHH---
Q ss_conf 386179999668147999999985899844999-8255788551899704851554255678888838999999972---
Q gi|254781176|r 13 LKPRITVFGVGGGGGNAVNNMVSSGLQGVNFVV-ANTDAQALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAEEC--- 88 (502)
Q Consensus 13 ~~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~-~ntd~~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~--- 88 (502)
-|.||-|||.|..|...+..+.. ..++++++ ++.+...+ ++.|...
T Consensus 5 ~~irvgiiG~G~~~~~~~~~l~~--~~~~elvav~d~~~~~~----------------------------~~~a~~~~~~ 54 (362)
T 1ydw_A 5 TQIRIGVMGCADIARKVSRAIHL--APNATISGVASRSLEKA----------------------------KAFATANNYP 54 (362)
T ss_dssp -CEEEEEESCCTTHHHHHHHHHH--CTTEEEEEEECSSHHHH----------------------------HHHHHHTTCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHH--CCCCEEEEEECCCHHHH----------------------------HHHHHHHCCC
T ss_conf 96189999682999999999985--89988999987999999----------------------------9999984998
Q ss_pred -----HHHHHHHHC--CCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCC
Q ss_conf -----999999726--998999980367666740789999999864984999950430004
Q gi|254781176|r 89 -----IDEITEMLD--KTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPFHFE 142 (502)
Q Consensus 89 -----~~~i~~~~~--~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf~~e 142 (502)
.+.+.++|. +.|+||| .|-...-+-+++.|-+.|.- .++-+|+..-
T Consensus 55 ~~~~~~~d~~ell~~~~iD~V~I------~tp~~~H~~~~~~al~aGkh--Vl~EKPla~~ 107 (362)
T 1ydw_A 55 ESTKIHGSYESLLEDPEIDALYV------PLPTSLHVEWAIKAAEKGKH--ILLEKPVAMN 107 (362)
T ss_dssp TTCEEESSHHHHHHCTTCCEEEE------CCCGGGHHHHHHHHHTTTCE--EEECSSCSSS
T ss_pred CCCEECCCHHHHHCCCCCCEEEE------ECCCHHHHHHHHHHHHCCCE--EEEECCCCCH
T ss_conf 55565389999964999888999------58826889999999976985--9994781000
No 145
>1wek_A Hypothetical protein TT1465; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.20A {Thermus thermophilus} SCOP: c.129.1.1
Probab=64.66 E-value=5.9 Score=17.40 Aligned_cols=104 Identities=15% Similarity=0.150 Sum_probs=54.0
Q ss_pred HHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCE
Q ss_conf 88551899704851554255678888838999999972999999726998999980367666740789999999864984
Q gi|254781176|r 51 QALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAEECIDEITEMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVL 130 (502)
Q Consensus 51 ~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~~~~i~~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~ 130 (502)
..|.+...+.--..| |.=.|-++.. .++|.+--..|.+ .|..+|+ |||+ |.--.+|+-|++.|-.
T Consensus 30 ~~l~~~~~p~V~Vfc-----gs~~~~~~~~-~~~A~~LG~~LA~--~g~~lV~-----GGg~--GlMgava~ga~~~gG~ 94 (217)
T 1wek_A 30 ETLSELQVPLVSVFG-----SARFGEGHPA-YEAGYRLGRALAE--AGFGVVT-----GGGP--GVMEAVNRGAYEAGGV 94 (217)
T ss_dssp HHHHHCCSCEEEEEC-----CSSCCTTSHH-HHHHHHHHHHHHH--HTCEEEE-----CSCS--HHHHHHHHHHHHTTCC
T ss_pred HHHHHCCCCEEEEEC-----CCCCCCCCHH-HHHHHHHHHHHHH--CCCEEEE-----CCCH--HHHHHHHHHHHHCCCE
T ss_conf 999856998299989-----8889989989-9999999999998--7999997-----9867--8998999999866996
Q ss_pred EEEEEECCCCCCCHHH-------HHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999504300040678-------88899999999986333545027
Q gi|254781176|r 131 TVGVVTKPFHFEGSRR-------MRVAESGIEALQETVDTLIVIPN 169 (502)
Q Consensus 131 ~~~~v~~pf~~eg~~r-------~~~a~~~~~~l~~~~d~~i~i~n 169 (502)
++||..--+..+.... ...-.+=...|-+.+|++|++|-
T Consensus 95 viGI~~~~~~~~~~~~~~~~~i~~~~~~~Rk~~m~~~sDafI~LPG 140 (217)
T 1wek_A 95 SVGLNIELPHEQKPNPYQTHALSLRYFFVRKVLFVRYAVGFVFLPG 140 (217)
T ss_dssp EEEEEECCTTCCCCCSCCSEEEEESCHHHHHHHHHHTEEEEEECSC
T ss_pred EEEEECCCCHHHCCCCCCCEEEECCCHHHHHHHHHHCCCEEEECCC
T ss_conf 9999756310211474322157527599998999862976898488
No 146
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI, protein structure initiative; 2.85A {Plasmodium falciparum 3D7}
Probab=64.02 E-value=3.9 Score=18.74 Aligned_cols=39 Identities=10% Similarity=0.138 Sum_probs=26.6
Q ss_pred HHCCCEEEEEEECCCHHHHHHHHHHCC------CCCCEEEEECCC
Q ss_conf 543861799996681479999999858------998449998255
Q gi|254781176|r 11 TELKPRITVFGVGGGGGNAVNNMVSSG------LQGVNFVVANTD 49 (502)
Q Consensus 11 ~~~~~~i~v~g~gg~g~n~~~~~~~~~------~~~~~~~~~ntd 49 (502)
++-.-||.|+|-|.-|.-.-..+.+.+ ...|.+++.|.+
T Consensus 18 ~~~~mKI~IiGaGawGtALA~~La~ng~~~~~~~~~V~lw~r~~~ 62 (375)
T 1yj8_A 18 KDGPLKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp HHSCBCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCC
T ss_conf 279978999897999999999999708765556876799980654
No 147
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=63.91 E-value=6.1 Score=17.31 Aligned_cols=59 Identities=22% Similarity=0.296 Sum_probs=36.4
Q ss_pred CCCCCCCHHH--HHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCC
Q ss_conf 6788888389--999999729999997269989999803676667407899999998649849999504300
Q gi|254781176|r 71 GLGAGSHPEV--GRAAAEECIDEITEMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPFH 140 (502)
Q Consensus 71 g~g~g~~~~~--g~~~a~~~~~~i~~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf~ 140 (502)
+.|.+.+|-. -++.|.|--..|.+ .|. +|+ ||| +.|.--.+|+-|++.|..++|| +|+.
T Consensus 31 ~~~~~~~~~~~~~~~~a~elG~~La~--~G~-~V~-----~GG-~~GlM~a~a~ga~~~GG~viGI--iP~~ 91 (195)
T 1rcu_A 31 YSGPVNKSPVSELRDICLELGRTLAK--KGY-LVF-----NGG-RDGVMELVSQGVREAGGTVVGI--LPDE 91 (195)
T ss_dssp CCSCTTSTTTGGGHHHHHHHHHHHHH--TTC-EEE-----ECC-SSHHHHHHHHHHHHTTCCEEEE--ESTT
T ss_pred ECCCCCCCCCHHHHHHHHHHHHHHHH--CCC-EEE-----CCC-HHHHHHHHHHHHHHCCCEEEEE--CCHH
T ss_conf 44899999558999999999999998--799-999-----487-2748899999888629906887--3267
No 148
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P)binding protein, rossmann fold; HET: NAP; 2.15A {Streptococcus pyogenes m1 gas} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=62.51 E-value=4.3 Score=18.40 Aligned_cols=35 Identities=11% Similarity=0.339 Sum_probs=26.3
Q ss_pred EEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCHHHH
Q ss_conf 17999966814799999998589984499982557885
Q gi|254781176|r 16 RITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDAQAL 53 (502)
Q Consensus 16 ~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~~~l 53 (502)
||.+||.|.-|.-.+..+.+.+ -++++.+.+....
T Consensus 5 kIg~IG~G~mg~ai~~gl~~~~---~~i~v~~r~~~~~ 39 (259)
T 2ahr_A 5 KIGIIGVGKMASAIIKGLKQTP---HELIISGSSLERS 39 (259)
T ss_dssp EEEEECCSHHHHHHHHHHTTSS---CEEEEECSSHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHCC---CEEEEECCCHHHH
T ss_conf 8999888499999999998499---8499978999999
No 149
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=62.50 E-value=6 Score=17.34 Aligned_cols=96 Identities=14% Similarity=0.217 Sum_probs=59.4
Q ss_pred CEEEEEEECCCHHHH-HHHHHHCCCCCCEEEEECCCHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 617999966814799-9999985899844999825578855189970485155425567888883899999997299999
Q gi|254781176|r 15 PRITVFGVGGGGGNA-VNNMVSSGLQGVNFVVANTDAQALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAEECIDEIT 93 (502)
Q Consensus 15 ~~i~v~g~gg~g~n~-~~~~~~~~~~~~~~~~~ntd~~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~~~~i~ 93 (502)
.||-+||.|.-|.+. +..+ ....++++++|+.+...+...... .|.. ++-.+.+++.
T Consensus 3 irigiiG~G~~a~~~h~~~l--~~~~~~~l~~~d~~~~~~~~~a~~----~~~~----------------~~~~~~~~ll 60 (323)
T 1xea_A 3 LKIAMIGLGDIAQKAYLPVL--AQWPDIELVLCTRNPKVLGTLATR----YRVS----------------ATCTDYRDVL 60 (323)
T ss_dssp EEEEEECCCHHHHHTHHHHH--TTSTTEEEEEECSCHHHHHHHHHH----TTCC----------------CCCSSTTGGG
T ss_pred CEEEEEECCHHHHHHHHHHH--HHCCCCEEEEEECCHHHHHHHHHH----CCCC----------------CEECCHHHHH
T ss_conf 27999928899999999999--819896899998999999999998----3998----------------4108899995
Q ss_pred HHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCC
Q ss_conf 9726998999980367666740789999999864984999950430004
Q gi|254781176|r 94 EMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPFHFE 142 (502)
Q Consensus 94 ~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf~~e 142 (502)
+ .+.|.|+|+ |-+..-.-+++.|=+.|.- .+|-+|+..-
T Consensus 61 ~--~~iD~V~I~------tp~~~H~~~~~~al~~Gkh--Vl~EKP~a~~ 99 (323)
T 1xea_A 61 Q--YGVDAVMIH------AATDVHSTLAAFFLHLGIP--TFVDKPLAAS 99 (323)
T ss_dssp G--GCCSEEEEC------SCGGGHHHHHHHHHHTTCC--EEEESCSCSS
T ss_pred C--CCCCEEEEE------CCCHHHHHHHHHHHHCCCC--EEEECCCCCC
T ss_conf 5--899999981------7826779999999863896--6874576442
No 150
>1a9x_A Carbamoyl phosphate synthetase (large chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: a.92.1.1 c.24.1.1 c.30.1.1 c.30.1.1 d.142.1.2 d.142.1.2 PDB: 1ce8_A* 1m6v_A* 1c30_A* 1bxr_A* 1c3o_A* 1cs0_A* 1jdb_B* 1kee_A* 1t36_A*
Probab=61.92 E-value=3.5 Score=19.06 Aligned_cols=195 Identities=18% Similarity=0.220 Sum_probs=98.2
Q ss_pred CEEEEEEECCC-----------HHHHHHHHHHCCCCCCEEEEECCCH--HHHHHCCCCEEEEECCCCCCCCCCCCCHHHH
Q ss_conf 61799996681-----------4799999998589984499982557--8855189970485155425567888883899
Q gi|254781176|r 15 PRITVFGVGGG-----------GGNAVNNMVSSGLQGVNFVVANTDA--QALMMSKAKQIIQLGSGITEGLGAGSHPEVG 81 (502)
Q Consensus 15 ~~i~v~g~gg~-----------g~n~~~~~~~~~~~~~~~~~~ntd~--~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g 81 (502)
-||.|+|=|.- |.-++-.+.+.|+ +.|++|.+. -.++...|+ ++-+++ +|.
T Consensus 8 kKVLIiGsG~i~IGqa~EfDys~~qai~alke~Gi---~tVlVnsNpati~td~~~AD-~vYieP-lt~----------- 71 (1073)
T 1a9x_A 8 KSILILGAGPIVIGQACEFDYSGAQACKALREEGY---RVINVNSNPATIMTDPEMAD-ATYIEP-IHW----------- 71 (1073)
T ss_dssp CEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTC---EEEEECSCTTCGGGCGGGSS-EEECSC-CCH-----------
T ss_pred CEEEEECCCCCHHCCHHHHHHHHHHHHHHHHHCCC---EEEEECCCHHHHCCCCCCCC-EEEECC-CCH-----------
T ss_conf 88999888802313010137789999999998799---89998588446248844150-679878-999-----------
Q ss_pred HHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHH--HHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 999997299999972699899998036766674078999999--986498499995043000406788889999999998
Q gi|254781176|r 82 RAAAEECIDEITEMLDKTHMCFVTAGMGGGTGTGAAPIIAKI--ARNKGVLTVGVVTKPFHFEGSRRMRVAESGIEALQE 159 (502)
Q Consensus 82 ~~~a~~~~~~i~~~~~~~~~~~~~ag~gggtgtg~~p~ia~~--a~~~~~~~~~~v~~pf~~eg~~r~~~a~~~~~~l~~ 159 (502)
+...+|.+. +..| -|..|+||-|+--.+.-.++- .+++|+- |+..|. +--+++.. .....++.+
T Consensus 72 -----e~i~~Ii~~-e~pD--aI~p~~GgqtaLnl~~~L~e~gil~~~gI~---~iGps~--~~I~~~~D-r~~~r~~m~ 137 (1073)
T 1a9x_A 72 -----EVVRKIIEK-ERPD--AVLPTMGGQTALNCALELERQGVLEEFGVT---MIGATA--DAIDKAED-RRRFDVAMK 137 (1073)
T ss_dssp -----HHHHHHHHH-HCCS--EEECSSSHHHHHHHHHHHHHTTHHHHHTCE---ECSSCH--HHHHHHHS-HHHHHHHHH
T ss_pred -----HHHHHHHHH-HCCC--EEEECCCCHHHHHHHHHHHHCCCHHHCCCE---EECCCH--HHHHHHHC-HHHHHHHHH
T ss_conf -----999999998-5899--999888784789999999975967877988---988999--99997259-999999999
Q ss_pred HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEEEEEECCCCCH
Q ss_conf 63335450278887413665318999744679999998888876516655558987878764158658998761486204
Q gi|254781176|r 160 TVDTLIVIPNQNLFRIANDKTTFADAFSMADQVLYSGVSCITDLMIKEGLINLDFADVRSVMRNMGRAMMGTGEASGHGR 239 (502)
Q Consensus 160 ~~d~~i~i~n~~l~~~~~~~~~~~~af~~~d~~l~~~v~~i~~~i~~~g~in~df~d~~~v~~~~g~a~~g~g~~~g~~r 239 (502)
... +=++|. ..+ .++.+|.+.|+++ --|=+ ||.....+|+. .+.+.-++-
T Consensus 138 ~~g-vPv~~s----~~v---~s~eea~~~A~~I------------GyPVi-------Irps~~~GG~G---m~iv~~~~e 187 (1073)
T 1a9x_A 138 KIG-LETARS----GIA---HTMEEALAVAADV------------GFPCI-------IRPSFTMGGSG---GGIAYNREE 187 (1073)
T ss_dssp HTT-CCCCSE----EEE---SSHHHHHHHHHHH------------CSSEE-------EEETTCCTTTT---CEEESSHHH
T ss_pred HCC-CCCCCC----EEE---CCHHHHHHHHHHC------------CCCEE-------EEECCCCCCCC---CCEECCHHH
T ss_conf 779-998997----220---8999999999865------------99889-------99787789987---607779999
Q ss_pred HHHHHHHHHH----CCCCCCCCCCCCCEEEEEEE
Q ss_conf 8999988752----70100022455537899961
Q gi|254781176|r 240 GIQAAEAAVA----NPLLDEASMKGSQGLLISIT 269 (502)
Q Consensus 240 ~~~a~~~a~~----~pll~~~~~~~a~~~l~~i~ 269 (502)
..++++.|+. +++|=+.+|.|+|-+=+.+.
T Consensus 188 L~~~~~~a~~~s~~~~vliEk~i~g~keIEvqVl 221 (1073)
T 1a9x_A 188 FEEICARGLDLSPTKELLIDESLIGWKEYEMEVV 221 (1073)
T ss_dssp HHHHHHHHHHHCTTSCEEEEECCTTSEEEEEEEE
T ss_pred HHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEEE
T ss_conf 9999999997389986799985178558999998
No 151
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=61.47 E-value=6.7 Score=17.00 Aligned_cols=108 Identities=20% Similarity=0.265 Sum_probs=57.8
Q ss_pred EEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHH--H-----
Q ss_conf 179999668147999999985899844999825578855189970485155425567888883899999997--2-----
Q gi|254781176|r 16 RITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDAQALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAEE--C----- 88 (502)
Q Consensus 16 ~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~--~----- 88 (502)
||.|||.|=.|.-+--.+-..| .+.+++++|.+-+...++. ++.+ .+|.+.+.-... +
T Consensus 4 kI~ViG~G~vGl~~a~~~a~~g---~~V~g~D~~~~~i~~l~~g-~~p~-----------~E~~l~~~l~~~~~~~~l~~ 68 (450)
T 3gg2_A 4 DIAVVGIGYVGLVSATCFAELG---ANVRCIDTDRNKIEQLNSG-TIPI-----------YEPGLEKMIARNVKAGRLRF 68 (450)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT---CEEEEECSCHHHHHHHHHT-CSCC-----------CSTTHHHHHHHHHHTTSEEE
T ss_pred EEEEECCCHHHHHHHHHHHHCC---CCEEEEECCHHHHHHHHCC-CCCC-----------CCCCHHHHHHHHHHCCCEEE
T ss_conf 6999898778999999999679---9189998999999999779-8997-----------89899999999986498399
Q ss_pred HHHHHHHHCCCCEEEEEECCC--C--CCC-CCHHHHHHHHHHHC--CCEEEEEEECC
Q ss_conf 999999726998999980367--6--667-40789999999864--98499995043
Q gi|254781176|r 89 IDEITEMLDKTHMCFVTAGMG--G--GTG-TGAAPIIAKIARNK--GVLTVGVVTKP 138 (502)
Q Consensus 89 ~~~i~~~~~~~~~~~~~ag~g--g--gtg-tg~~p~ia~~a~~~--~~~~~~~v~~p 138 (502)
-..+.+.+..+|++||+.+-- . ..- +-.--++..+++.+ +.++|---|.|
T Consensus 69 t~~~~~~i~~~dii~icVpTP~~~~~~~d~~~~~~~~~~i~~~~~~~~~iii~STv~ 125 (450)
T 3gg2_A 69 GTEIEQAVPEADIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTKSTVP 125 (450)
T ss_dssp ESCHHHHGGGCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSCCC
T ss_pred ECCHHHHHHHCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCC
T ss_conf 878799873099999966999755668985888754899998657785899578445
No 152
>2abw_A PDX2 protein, glutaminase; PLP-synthase, vitamin B6, malaria, transferase; HET: PG4; 1.62A {Plasmodium falciparum} SCOP: c.23.16.1
Probab=61.08 E-value=6.8 Score=16.95 Aligned_cols=49 Identities=14% Similarity=0.262 Sum_probs=33.0
Q ss_pred CCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHCCCCEEEEEC
Q ss_conf 8617999966814799999998589984499982557885518997048515
Q gi|254781176|r 14 KPRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDAQALMMSKAKQIIQLG 65 (502)
Q Consensus 14 ~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~~~l~~~~~~~~~~~g 65 (502)
+.||-|+.++|.-...++.+.+.+..++++..+. +...|. .++.-|+-|
T Consensus 3 ~~kigvl~~~Gn~~~~~~al~~lg~~~~~v~~v~-~~~~l~--~~d~lILPG 51 (227)
T 2abw_A 3 EITIGVLSLQGDFEPHINHFIKLQIPSLNIIQVR-NVHDLG--LCDGLVIPG 51 (227)
T ss_dssp CEEEEEECTTSCCHHHHHHHHTTCCTTEEEEEEC-SHHHHH--TCSEEEECC
T ss_pred CCEEEEEECCCCHHHHHHHHHHHCCCCCEEEEEC-CHHHHH--CCCEEEECC
T ss_conf 8789999558869999999998378984799949-989982--799999989
No 153
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase family, NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=60.90 E-value=6.8 Score=16.93 Aligned_cols=99 Identities=25% Similarity=0.397 Sum_probs=60.9
Q ss_pred HCCC-EEEEEEECCCHHHHHHHHHHCCCCCCEEE-EECCCHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 4386-17999966814799999998589984499-982557885518997048515542556788888389999999729
Q gi|254781176|r 12 ELKP-RITVFGVGGGGGNAVNNMVSSGLQGVNFV-VANTDAQALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAEECI 89 (502)
Q Consensus 12 ~~~~-~i~v~g~gg~g~n~~~~~~~~~~~~~~~~-~~ntd~~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~~ 89 (502)
+.|| ||-+||.|.-|-..+..++.. ..+++++ .++.|...+........+ . .. .
T Consensus 5 ~~kpirvgiIG~G~~g~~~~~~~~~~-~~~~~l~~i~d~~~~~~~~~~~~~~~--~-~~--------------------~ 60 (346)
T 3cea_A 5 TRKPLRAAIIGLGRLGERHARHLVNK-IQGVKLVAACALDSNQLEWAKNELGV--E-TT--------------------Y 60 (346)
T ss_dssp CCCCEEEEEECCSTTHHHHHHHHHHT-CSSEEEEEEECSCHHHHHHHHHTTCC--S-EE--------------------E
T ss_pred CCCCCEEEEECCHHHHHHHHHHHHHC-CCCCEEEEEECCCHHHHHHHHHHCCC--C-CC--------------------C
T ss_conf 99976699998849999999999854-99968999987999999999998299--8-51--------------------5
Q ss_pred HHHHHHHC--CCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCC
Q ss_conf 99999726--998999980367666740789999999864984999950430004
Q gi|254781176|r 90 DEITEMLD--KTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPFHFE 142 (502)
Q Consensus 90 ~~i~~~~~--~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf~~e 142 (502)
..+.++|. +.|.|||+. -+..-+-+|..|=+.|+- .++-+|+.+-
T Consensus 61 ~~~~~ll~~~~vD~v~I~t------p~~~h~~~~~~al~~Gk~--V~~EKP~a~~ 107 (346)
T 3cea_A 61 TNYKDMIDTENIDAIFIVA------PTPFHPEMTIYAMNAGLN--VFCEKPLGLD 107 (346)
T ss_dssp SCHHHHHTTSCCSEEEECS------CGGGHHHHHHHHHHTTCE--EEECSCCCSC
T ss_pred CCHHHHHCCCCCCEEEEEC------HHHHHHHHHHHHHHCCCE--EEEECCCCCC
T ss_conf 9999996489988899957------176589999999864985--9885574222
No 154
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=60.67 E-value=6.9 Score=16.90 Aligned_cols=133 Identities=16% Similarity=0.239 Sum_probs=68.8
Q ss_pred CCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEE-CCCHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHH----H
Q ss_conf 861799996681479999999858998449998-25578855189970485155425567888883899999997----2
Q gi|254781176|r 14 KPRITVFGVGGGGGNAVNNMVSSGLQGVNFVVA-NTDAQALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAEE----C 88 (502)
Q Consensus 14 ~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~-ntd~~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~----~ 88 (502)
|.||-|||.|..|.+..-..+ ....+++++++ +.|...+. +.+.+ .
T Consensus 2 klrvgiIG~G~~g~~~~~~~l-~~~~~~~l~av~d~~~~~~~----------------------------~~~~~~~~~~ 52 (387)
T 3moi_A 2 KIRFGICGLGFAGSVLMAPAM-RHHPDAQIVAACDPNEDVRE----------------------------RFGKEYGIPV 52 (387)
T ss_dssp CEEEEEECCSHHHHTTHHHHH-HHCTTEEEEEEECSCHHHHH----------------------------HHHHHHTCCE
T ss_pred CCEEEEECCCHHHHHHHHHHH-HHCCCEEEEEEECCCHHHHH----------------------------HHHHHHCCCE
T ss_conf 616999989699999999999-73979199999879999999----------------------------9999859985
Q ss_pred HHHHHHHHC--CCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999726--998999980367666740789999999864984999950430004067888899999999986333545
Q gi|254781176|r 89 IDEITEMLD--KTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPFHFEGSRRMRVAESGIEALQETVDTLIV 166 (502)
Q Consensus 89 ~~~i~~~~~--~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf~~eg~~r~~~a~~~~~~l~~~~d~~i~ 166 (502)
...+.++|. +.|+|+|+ |-.-.-+-++..|=+.|.-+ ++-+|+..- ...|++=++..++ ...++.
T Consensus 53 ~~~~~ell~~~~vD~V~i~------tp~~~H~~~~~~al~~gkhV--~~EKPla~~----~~ea~~l~~~a~~-~g~~~~ 119 (387)
T 3moi_A 53 FATLAEMMQHVQMDAVYIA------SPHQFHCEHVVQASEQGLHI--IVEKPLTLS----RDEADRMIEAVER-AGVHLV 119 (387)
T ss_dssp ESSHHHHHHHSCCSEEEEC------SCGGGHHHHHHHHHHTTCEE--EECSCCCSC----HHHHHHHHHHHHH-HTCCEE
T ss_pred ECCHHHHHCCCCCCEEEEC------CCCHHHHHHHHHHHHHCCCE--ECCCCCCCC----HHHHHHHHHHHHH-HCCEEE
T ss_conf 8999999659999889990------89678999999998618956--537888799----9999999999998-099489
Q ss_pred HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 0278887413665318999744679999998
Q gi|254781176|r 167 IPNQNLFRIANDKTTFADAFSMADQVLYSGV 197 (502)
Q Consensus 167 i~n~~l~~~~~~~~~~~~af~~~d~~l~~~v 197 (502)
.+....+..+|..+-++|.++.
T Consensus 120 ---------v~~~~r~~p~~~~~k~~i~~g~ 141 (387)
T 3moi_A 120 ---------VGTSRSHDPVVRTLRAIVQEGS 141 (387)
T ss_dssp ---------ECCCGGGSHHHHHHHHHHHHCT
T ss_pred ---------EEECCCCCHHHHHHHHHHHCCC
T ss_conf ---------7222336848999999873488
No 155
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=59.89 E-value=7.1 Score=16.81 Aligned_cols=89 Identities=11% Similarity=0.078 Sum_probs=51.1
Q ss_pred CCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 86179999668147999999985899844999825578855189970485155425567888883899999997299999
Q gi|254781176|r 14 KPRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDAQALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAEECIDEIT 93 (502)
Q Consensus 14 ~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~~~~i~ 93 (502)
|.||-|+|.|..|...+..+. ...+++++++-. +... ..+++|. .....+.
T Consensus 3 ~irv~ivG~G~iG~~~~~~l~--~~~~~elv~v~~------r~~~---------~~~~~~v------------~~~~d~~ 53 (320)
T 1f06_A 3 NIRVAIVGYGNLGRSVEKLIA--KQPDMDLVGIFS------RRAT---------LDTKTPV------------FDVADVD 53 (320)
T ss_dssp CEEEEEECCSHHHHHHHHHHT--TCSSEEEEEEEE------SSSC---------CSSSSCE------------EEGGGGG
T ss_pred CCEEEEECCCHHHHHHHHHHH--HCCCCEEEEEEE------CCHH---------HCCCCCC------------CCHHHHH
T ss_conf 557999880899999999997--099979999996------8867---------6768886------------4517799
Q ss_pred HHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCC
Q ss_conf 9726998999980367666740789999999864984999950430
Q gi|254781176|r 94 EMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPF 139 (502)
Q Consensus 94 ~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf 139 (502)
..+.+.|+|+++.+. ....-+++.+=+.|+-+|.. .|+
T Consensus 54 ~~~~~~Dvvii~tp~------~~~~~~~~~~l~~G~~VV~~--~~~ 91 (320)
T 1f06_A 54 KHADDVDVLFLCMGS------ATDIPEQAPKFAQFACTVDT--YDN 91 (320)
T ss_dssp GTTTTCSEEEECSCT------TTHHHHHHHHHTTTSEEECC--CCC
T ss_pred HHCCCCCEEEECCCC------CCCHHHHHHHHHCCCCEEEC--CCC
T ss_conf 740579999987897------16899999999869999982--887
No 156
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural genomics, PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=59.56 E-value=7.1 Score=16.77 Aligned_cols=97 Identities=26% Similarity=0.322 Sum_probs=62.0
Q ss_pred EEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHH--CCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 1799996681479999999858998449998255788551--89970485155425567888883899999997299999
Q gi|254781176|r 16 RITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDAQALMM--SKAKQIIQLGSGITEGLGAGSHPEVGRAAAEECIDEIT 93 (502)
Q Consensus 16 ~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~~~l~~--~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~~~~i~ 93 (502)
||.|+|.|--|......+.+.| .++++++.|.+.+.. ......+..|. +.++++=++|
T Consensus 2 ~iiI~G~g~~g~~la~~L~~~g---~~vvvid~d~~~~~~~~~~~~~~~i~gD--------~~~~~~L~~a--------- 61 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRK---YGVVIINKDRELCEEFAKKLKATIIHGD--------GSHKEILRDA--------- 61 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTT---CCEEEEESCHHHHHHHHHHSSSEEEESC--------TTSHHHHHHH---------
T ss_pred EEEEECCCHHHHHHHHHHHHCC---CCEEEEECCHHHHHHHHHHCCCEEEECC--------CCCHHHHHHH---------
T ss_conf 8999998899999999999789---9899999999999999985263078545--------4326888766---------
Q ss_pred HHHCCCCEEEEEECCCCCCCCCHH-HHHHHHHHHC-CCE-EEEEEECCC
Q ss_conf 972699899998036766674078-9999999864-984-999950430
Q gi|254781176|r 94 EMLDKTHMCFVTAGMGGGTGTGAA-PIIAKIARNK-GVL-TVGVVTKPF 139 (502)
Q Consensus 94 ~~~~~~~~~~~~ag~gggtgtg~~-p~ia~~a~~~-~~~-~~~~v~~pf 139 (502)
-++.+++++.+ |+.-.. -.++..||+. +.. +++.+.-+-
T Consensus 62 -~i~~a~~~ia~------t~~D~~N~~~~~~~~~~~~~~~i~~~~~~~~ 103 (218)
T 3l4b_C 62 -EVSKNDVVVIL------TPRDEVNLFIAQLVMKDFGVKRVVSLVNDPG 103 (218)
T ss_dssp -TCCTTCEEEEC------CSCHHHHHHHHHHHHHTSCCCEEEECCCSGG
T ss_pred -HCCCCCEEEEC------CCCHHHHHHHHHHHHHHCCCCEEEEEECCHH
T ss_conf -40466547641------5878888999999999859974999962423
No 157
>1mqs_A SLY1 protein, SLY1P; SM-protein, snare, syntaxin, endocytosis/exocytosis complex; 3.00A {Saccharomyces cerevisiae} SCOP: e.25.1.1
Probab=59.41 E-value=7.2 Score=16.75 Aligned_cols=23 Identities=4% Similarity=-0.071 Sum_probs=13.8
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 46799999988888765166555
Q gi|254781176|r 188 MADQVLYSGVSCITDLMIKEGLI 210 (502)
Q Consensus 188 ~~d~~l~~~v~~i~~~i~~~g~i 210 (502)
..+.++.+.++|+..+...-|.+
T Consensus 196 ~~~~~l~~ia~~L~sv~~tlg~~ 218 (671)
T 1mqs_A 196 EITGLCANIADGLFNTVLTINSI 218 (671)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 56799999999999999983899
No 158
>2r7k_A 5-formaminoimidazole-4-carboxamide-1-(beta)-D- ribofuranosyl 5'-monophosphate synthetase...; ATP-grAsp superfamily, ATP-binding; HET: ACP AMZ; 2.10A {Methanocaldococcus jannaschii} SCOP: c.30.1.8 d.142.1.9 PDB: 2r7l_A* 2r7m_A* 2r7n_A*
Probab=58.99 E-value=7.3 Score=16.70 Aligned_cols=43 Identities=33% Similarity=0.386 Sum_probs=29.1
Q ss_pred HHHHHHHHHCC--CC-EEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEE
Q ss_conf 29999997269--98-999980367666740789999999864984999950
Q gi|254781176|r 88 CIDEITEMLDK--TH-MCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVT 136 (502)
Q Consensus 88 ~~~~i~~~~~~--~~-~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~ 136 (502)
.+++|+++|++ .+ +.+.+. |+..|--|.+.||++|+-||+|..
T Consensus 3 ~~~~i~~~l~~~~~~~i~I~~~------gshSa~~i~~~ake~G~~TV~V~~ 48 (361)
T 2r7k_A 3 SKDEILEIFDKYNKDEITIATL------GSHTSLHILKGAKLEGFSTVCITM 48 (361)
T ss_dssp CHHHHHHHHTTSCTTSCEEEEE------SSTTHHHHHHHHHHTTCCEEEEEC
T ss_pred CHHHHHHHHHHCCCCCCEEEEE------CCHHHHHHHHHHHHCCCEEEEEEC
T ss_conf 7799999999659788589983------658999999999983997999964
No 159
>1vhv_A Diphthine synthase; structural genomics, transferase; HET: MSE; 1.75A {Archaeoglobus fulgidus} SCOP: c.90.1.1
Probab=58.94 E-value=7.3 Score=16.70 Aligned_cols=99 Identities=17% Similarity=0.133 Sum_probs=51.7
Q ss_pred CCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECC-------CHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 86179999668147999999985899844999825-------57885518997048515542556788888389999999
Q gi|254781176|r 14 KPRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANT-------DAQALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAE 86 (502)
Q Consensus 14 ~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~nt-------d~~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~ 86 (502)
..++.+||+|=+.-.-+..--..-++.++.|.+.+ ....|... ++.+.. ...+...+
T Consensus 12 M~~L~iVG~GpG~~~~lT~~a~~~l~~advV~~~~~~~~~~~~~~~l~~~-------~~~~~~---------~~~~~~~e 75 (268)
T 1vhv_A 12 MSLLTFVGLGLWDVKDISVKGLEAVREADEVYVEYYTSKLLSSIEEMEEF-------FGKRVV---------ELERSDLE 75 (268)
T ss_dssp -CEEEEEECBSSSGGGSBHHHHHHHHHCSEEEEECSSCCCSSCHHHHHHH-------HTSCCE---------EECHHHHT
T ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHH-------HCCCCC---------CCCCCHHH
T ss_conf 67789996489997999999999997399999968775220168999887-------487602---------36632088
Q ss_pred HHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCE
Q ss_conf 72999999726998999980367666740789999999864984
Q gi|254781176|r 87 ECIDEITEMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVL 130 (502)
Q Consensus 87 ~~~~~i~~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~ 130 (502)
+..+.|.+..++-++|+++.|--+--|++. .+.+.+++.|+-
T Consensus 76 ~~~~~i~~~a~~~~vv~l~~GDP~i~~~~~--~l~~~~~~~g~~ 117 (268)
T 1vhv_A 76 ENSFRLIERAKSKSVVLLVPGDPMVATTHS--AIKLEAERKGVK 117 (268)
T ss_dssp TTHHHHHHHHTTSEEEEEESBCTTSSSHHH--HHHHHHHHTTCC
T ss_pred HHHHHHHHHHCCCCEEEEECCCCCCCCCHH--HHHHHHHHCCCC
T ss_conf 999999999627986899669986666379--999999977993
No 160
>3fdi_A Uncharacterized protein; cytidylate kinase like protein, PSI, MCSG, PRK04182 class member, structural genomics; 2.20A {Eubacterium ventriosum atcc 27560}
Probab=58.26 E-value=5.9 Score=17.40 Aligned_cols=26 Identities=15% Similarity=0.290 Sum_probs=12.4
Q ss_pred ECCCHHHHHHHHHHCCCCCCEEEEECCCH
Q ss_conf 66814799999998589984499982557
Q gi|254781176|r 22 VGGGGGNAVNNMVSSGLQGVNFVVANTDA 50 (502)
Q Consensus 22 ~gg~g~n~~~~~~~~~~~~~~~~~~ntd~ 50 (502)
-=|+|-.+|-+.....+. ..| ++||.
T Consensus 14 ~~GsGKstiak~LA~~Lg-~~~--~d~d~ 39 (201)
T 3fdi_A 14 EFGSGGHLVAKKLAEHYN-IPL--YSKEL 39 (201)
T ss_dssp CTTSSHHHHHHHHHHHTT-CCE--ECHHH
T ss_pred CCCCCHHHHHHHHHHHHC-CCE--ECCHH
T ss_conf 999986999999999959-918--89688
No 161
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, PSI; HET: MSE; 2.00A {Enterococcus faecalis V583}
Probab=57.08 E-value=4.4 Score=18.29 Aligned_cols=40 Identities=18% Similarity=0.218 Sum_probs=31.0
Q ss_pred CEEEEEEECCCHHHHHHHHHHCCCCCCEEEEEC-CCHHHHHH
Q ss_conf 617999966814799999998589984499982-55788551
Q gi|254781176|r 15 PRITVFGVGGGGGNAVNNMVSSGLQGVNFVVAN-TDAQALMM 55 (502)
Q Consensus 15 ~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~n-td~~~l~~ 55 (502)
=||.|+|.|.-|+=.-.+|.+.|.. |.|++-+ +....+..
T Consensus 4 MkI~IiGaGaiG~~~a~~La~~G~~-V~lv~r~~~~~e~i~~ 44 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGND-VTLIDQWPAHIEAIRK 44 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCE-EEEECSCHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCC-EEEEECCHHHHHHHHH
T ss_conf 9899999289999999999968997-8999788999999997
No 162
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=56.74 E-value=7.9 Score=16.44 Aligned_cols=98 Identities=21% Similarity=0.320 Sum_probs=53.9
Q ss_pred CCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCHH---HHHHC--------------------CCCEEEEECCCCCC
Q ss_conf 86179999668147999999985899844999825578---85518--------------------99704851554255
Q gi|254781176|r 14 KPRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDAQ---ALMMS--------------------KAKQIIQLGSGITE 70 (502)
Q Consensus 14 ~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~~---~l~~~--------------------~~~~~~~~g~~~~~ 70 (502)
|..|-+||+|-.|.+...+|.+.|.. ..+.|-+.. .|... ..+.+|.+= ++
T Consensus 2 ~anIG~IGLG~MG~~mA~nL~~~G~~---V~vydrt~~k~~~l~~~~a~~~~~~~a~s~~e~~~~l~~~dvIi~~--lp- 75 (482)
T 2pgd_A 2 QADIALIGLAVMGQNLILNMNDHGFV---VCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILL--VK- 75 (482)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCC---EEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEEC--SC-
T ss_pred CCCEEEEEEHHHHHHHHHHHHHCCCE---EEEECCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCEEEEE--CC-
T ss_conf 88489980458899999999977994---8998099999999998316535774558899999871699989997--89-
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC-CHHHHHHHHHHHCCCEEE
Q ss_conf 67888883899999997299999972699899998036766674-078999999986498499
Q gi|254781176|r 71 GLGAGSHPEVGRAAAEECIDEITEMLDKTHMCFVTAGMGGGTGT-GAAPIIAKIARNKGVLTV 132 (502)
Q Consensus 71 g~g~g~~~~~g~~~a~~~~~~i~~~~~~~~~~~~~ag~gggtgt-g~~p~ia~~a~~~~~~~~ 132 (502)
++ ++..+-.+.+...|+.-++++- +||.. ..+--+++.+++.|+.-+
T Consensus 76 ------~~----~~v~~Vi~~l~~~l~~G~iiID-----~sT~~~~~s~~~~~~l~~~gi~fl 123 (482)
T 2pgd_A 76 ------AG----QAVDNFIEKLVPLLDIGDIIID-----GGNSEYRDTMRRCRDLKDKGILFV 123 (482)
T ss_dssp ------TT----HHHHHHHHHHHHHCCTTCEEEE-----CSCCCHHHHHHHHHHHHHTTCEEE
T ss_pred ------CC----HHHHHHHHHHHHHCCCCCEEEE-----CCCCCHHHHHHHHHHHHHCCEEEE
T ss_conf ------82----8999999999952899998996-----788617899999999872470152
No 163
>2f02_A Tagatose-6-phosphate kinase; LACC, structural genomics, PSI, protein structure initiative; HET: ATP; 1.90A {Enterococcus faecalis V583} SCOP: c.72.1.1 PDB: 2awd_A*
Probab=56.21 E-value=8.1 Score=16.38 Aligned_cols=114 Identities=15% Similarity=0.158 Sum_probs=66.6
Q ss_pred EEEECCCHHHHHHHHHHCCCCCCEEEEEC-CC-----HHHHHHCCCCEE-EEECCCCC-------CC-----CCCCCCHH
Q ss_conf 99966814799999998589984499982-55-----788551899704-85155425-------56-----78888838
Q gi|254781176|r 19 VFGVGGGGGNAVNNMVSSGLQGVNFVVAN-TD-----AQALMMSKAKQI-IQLGSGIT-------EG-----LGAGSHPE 79 (502)
Q Consensus 19 v~g~gg~g~n~~~~~~~~~~~~~~~~~~n-td-----~~~l~~~~~~~~-~~~g~~~~-------~g-----~g~g~~~~ 79 (502)
..-.||+|.|+.-.+.+.|.. +.|+.+= -| .+.|....++.. +.+....+ .| .. ..|.
T Consensus 34 ~~~~GG~~~NvA~~la~lG~~-~~~i~~vGdd~~~~i~~~L~~~gv~~~~i~~~~~t~~~~~~~~~~~~~~~~~--~~~~ 110 (323)
T 2f02_A 34 TKTPGGKGLNVTRVIHDLGGD-VIATGVLGGFHGAFIANELKKANIPQAFTSIKEETRDSIAILHEGNQTEILE--AGPT 110 (323)
T ss_dssp EEEEESHHHHHHHHHHHHTCC-EEEEEEEEHHHHHHHHHHHHHTTCCBCCEEESSCCEEEEEEEETTEEEEEEE--CCCB
T ss_pred EECCCCHHHHHHHHHHHCCCC-EEEEEEECCCCHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEECCCCEEEEC--CCCC
T ss_conf 971697799999999987998-6999994571199999999971998427996279945999981798158834--8888
Q ss_pred HHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEE
Q ss_conf 99999997299999972699899998036766674078999999986498499995
Q gi|254781176|r 80 VGRAAAEECIDEITEMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVV 135 (502)
Q Consensus 80 ~g~~~a~~~~~~i~~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v 135 (502)
+....-.+..+.+...+..++++++..-+-.+.-.-..--+.+.+++.++.++--.
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (323)
T 2f02_A 111 VSPEEISNFLENFDQLIKQAEIVTISGSLAKGLPSDFYQELVQKAHAQEVKVLLDT 166 (323)
T ss_dssp CCHHHHHHHHHHHHHHHTTCSEEEEESCCCBTSCTTHHHHHHHHHHHTTCEEEEEC
T ss_pred CCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEECCC
T ss_conf 99999999999999762368899991777655567999999999997398052375
No 164
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genomics, joint center for structural genomics, JCSG; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima MSB8}
Probab=55.87 E-value=4.2 Score=18.50 Aligned_cols=38 Identities=18% Similarity=0.242 Sum_probs=26.9
Q ss_pred HHCCCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCC
Q ss_conf 543861799996681479999999858998449998255
Q gi|254781176|r 11 TELKPRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTD 49 (502)
Q Consensus 11 ~~~~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd 49 (502)
...+-||.|+|-|--|+-.-..+.+.+- .|.++.-+.+
T Consensus 11 ~~m~MKI~IiGaGa~GtalA~~La~ng~-~V~l~~r~~e 48 (335)
T 1z82_A 11 HHMEMRFFVLGAGSWGTVFAQMLHENGE-EVILWARRKE 48 (335)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEECCHH
T ss_conf 6455639999949999999999997899-6899971899
No 165
>2i5b_A Phosphomethylpyrimidine kinase; ADP complex, PDXK, THID, ribokinase superfamily, transferase; HET: ADP; 2.80A {Bacillus subtilis}
Probab=55.76 E-value=7 Score=16.84 Aligned_cols=136 Identities=15% Similarity=0.120 Sum_probs=72.8
Q ss_pred CEEEEE----EECCCHHHH-HHHHHHCCCCCCEEEEECCCHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 617999----966814799-999998589984499982557885518997048515542556788888389999999729
Q gi|254781176|r 15 PRITVF----GVGGGGGNA-VNNMVSSGLQGVNFVVANTDAQALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAEECI 89 (502)
Q Consensus 15 ~~i~v~----g~gg~g~n~-~~~~~~~~~~~~~~~~~ntd~~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~~ 89 (502)
+|+..| .-||||--+ +..+...|..+...+.+-| +|+........-..+. ..--.
T Consensus 4 ~~VL~IaG~D~sGgAGi~ADi~t~~a~g~~~~~viTalT-aQ~~~~~~~~~~~~~~-------------------~~~~~ 63 (271)
T 2i5b_A 4 HKALTIAGSDSSGGAGIQADLKTFQEKNVYGMTALTVIV-AMDPNNSWNHQVFPID-------------------TDTIR 63 (271)
T ss_dssp CEEEEEEEEETTSSSHHHHHHHHHHHTTCEEEEEEEEEE-EEETTTTTEEEEEECC-------------------HHHHH
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEE-EEECCCEEEEEEEECC-------------------HHHHH
T ss_conf 779999381899679999999999985997365115999-9806824899998569-------------------89999
Q ss_pred HHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCHHH-HHH-HHHHHHHHHHHHHHHHHH
Q ss_conf 999997269989999803676667407899999998649849999504300040678-888-999999999863335450
Q gi|254781176|r 90 DEITEMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPFHFEGSRR-MRV-AESGIEALQETVDTLIVI 167 (502)
Q Consensus 90 ~~i~~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf~~eg~~r-~~~-a~~~~~~l~~~~d~~i~i 167 (502)
++++..+++...=.|--||-|-. ...-+|+++.++.....+-+-..+...-|..- ... ...-.++|-+++ -|+.
T Consensus 64 ~ql~~l~~d~~~~aIk~G~l~s~--~~i~~v~~~l~~~~~~~vv~dpv~~~~~~~~l~~~~~~~~~~~~L~p~a--dviT 139 (271)
T 2i5b_A 64 AQLATITDGIGVDAMKTGMLPTV--DIIELAAKTIKEKQLKNVVIDPVMVCKGANEVLYPEHAQALREQLAPLA--TVIT 139 (271)
T ss_dssp HHHHHHHHHSCCSEEEECCCCSH--HHHHHHHHHHHHTTCSSEEECCCCSSBCSSSBSSHHHHHHHHHHTGGGC--SEEC
T ss_pred HHHHHHHCCCCCCEEEEEECCCH--HHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCC--CCCC
T ss_conf 99999971788677999621788--8888999999747998747500221689986578899999987168757--5417
Q ss_pred HHHHHHH
Q ss_conf 2788874
Q gi|254781176|r 168 PNQNLFR 174 (502)
Q Consensus 168 ~n~~l~~ 174 (502)
||..=+.
T Consensus 140 PN~~Ea~ 146 (271)
T 2i5b_A 140 PNLFEAS 146 (271)
T ss_dssp CBHHHHH
T ss_pred CCHHHHH
T ss_conf 8989999
No 166
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=55.31 E-value=3.2 Score=19.37 Aligned_cols=85 Identities=18% Similarity=0.261 Sum_probs=45.2
Q ss_pred EEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHH-----
Q ss_conf 179999668147999999985899844999825578855189970485155425567888883899999997299-----
Q gi|254781176|r 16 RITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDAQALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAEECID----- 90 (502)
Q Consensus 16 ~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~~~----- 90 (502)
||.|||-|-.|+-..-.+...| .+.+.++.+.+.|.+......=.+..-.-+|+ -..|.......+....
T Consensus 17 ~VaViGaG~mG~~iA~~~a~~G---~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~i~~~ 91 (302)
T 1f0y_A 17 HVTVIGGGLMGAGIAQVAAATG---HTVVLVDQTEDILAKSKKGIEESLRKVAKKKF--AENPKAGDEFVEKTLSTIATS 91 (302)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT---CEEEEECSCHHHHHHHHHHHHHHHHHHHHTTS--SSCHHHHHHHHHHHHHTEEEE
T ss_pred EEEEECCCHHHHHHHHHHHHCC---CCEEEEECCHHHHHHHHHHHHHHHHHHHHHCC--CCCHHCCHHHHHHHHHCCCCC
T ss_conf 6989896799999999999589---98799989878999999999999999998454--643002789999998425676
Q ss_pred -HHHHHHCCCCEEEEE
Q ss_conf -999972699899998
Q gi|254781176|r 91 -EITEMLDKTHMCFVT 105 (502)
Q Consensus 91 -~i~~~~~~~~~~~~~ 105 (502)
++.+++.++|+||=+
T Consensus 92 ~d~~~al~~aDlViEa 107 (302)
T 1f0y_A 92 TDAASVVHSTDLVVEA 107 (302)
T ss_dssp SCHHHHTTSCSEEEEC
T ss_pred CCHHHHCCCCCEEEEC
T ss_conf 6365551678489772
No 167
>2og2_A Putative signal recognition particle receptor; nucleotide-binding, protein transport; 2.00A {Arabidopsis thaliana}
Probab=55.23 E-value=8.3 Score=16.27 Aligned_cols=16 Identities=31% Similarity=0.557 Sum_probs=8.3
Q ss_pred CCCCCCHHHHHHHHHH
Q ss_conf 6667407899999998
Q gi|254781176|r 110 GGTGTGAAPIIAKIAR 125 (502)
Q Consensus 110 ggtgtg~~p~ia~~a~ 125 (502)
|-+|+|=+-.+||+|+
T Consensus 164 G~nGvGKTTTiaKLA~ 179 (359)
T 2og2_A 164 GVNGGGKTTSLGKLAH 179 (359)
T ss_dssp CCTTSCHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHH
T ss_conf 8888864617999999
No 168
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=54.79 E-value=8.5 Score=16.22 Aligned_cols=98 Identities=13% Similarity=0.113 Sum_probs=58.0
Q ss_pred CCEEEEEEECCCHH-HHHHHHHHCCCCCCEEE-EECCCHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 86179999668147-99999998589984499-98255788551899704851554255678888838999999972999
Q gi|254781176|r 14 KPRITVFGVGGGGG-NAVNNMVSSGLQGVNFV-VANTDAQALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAEECIDE 91 (502)
Q Consensus 14 ~~~i~v~g~gg~g~-n~~~~~~~~~~~~~~~~-~~ntd~~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~~~~ 91 (502)
+.||-|||+|+-|. ..+..+. ...+++++ +++.|...+......-.+ .. +-.+.++
T Consensus 5 ~irigiiG~G~~~~~~h~~~l~--~~~~~~lvav~d~~~~~~~~~a~~~~~---~~-----------------~~~~~~~ 62 (359)
T 3m2t_A 5 LIKVGLVGIGAQMQENLLPSLL--QMQDIRIVAACDSDLERARRVHRFISD---IP-----------------VLDNVPA 62 (359)
T ss_dssp CEEEEEECCSHHHHHTHHHHHH--TCTTEEEEEEECSSHHHHGGGGGTSCS---CC-----------------EESSHHH
T ss_pred CCEEEEECCHHHHHHHHHHHHH--HCCCCEEEEEECCCHHHHHHHHHHCCC---CC-----------------EECCHHH
T ss_conf 6289999171999999999998--399958999988999999999988499---85-----------------3189999
Q ss_pred HHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCC
Q ss_conf 999726998999980367666740789999999864984999950430004
Q gi|254781176|r 92 ITEMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPFHFE 142 (502)
Q Consensus 92 i~~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf~~e 142 (502)
+.+. .+.|.|+|+ |-+..-.-+++.|=+.|+-+ ++-+|+..-
T Consensus 63 ll~~-~~iD~V~I~------tp~~~H~~~~~~al~~Gk~V--~~EKP~a~~ 104 (359)
T 3m2t_A 63 MLNQ-VPLDAVVMA------GPPQLHFEMGLLAMSKGVNV--FVEKPPCAT 104 (359)
T ss_dssp HHHH-SCCSEEEEC------SCHHHHHHHHHHHHHTTCEE--EECSCSCSS
T ss_pred HHCC-CCCCEEEEC------CCHHHHHHHHHHHHHCCCEE--EEEECCCHH
T ss_conf 9659-999989987------86354358999998439809--998533031
No 169
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoid, oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=54.78 E-value=8.5 Score=16.22 Aligned_cols=96 Identities=18% Similarity=0.206 Sum_probs=56.3
Q ss_pred CCCEEEEEEE-CCCHHHHHHHHHHCCCCCCEEEEECC----C-H---HHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHH
Q ss_conf 3861799996-68147999999985899844999825----5-7---885518997048515542556788888389999
Q gi|254781176|r 13 LKPRITVFGV-GGGGGNAVNNMVSSGLQGVNFVVANT----D-A---QALMMSKAKQIIQLGSGITEGLGAGSHPEVGRA 83 (502)
Q Consensus 13 ~~~~i~v~g~-gg~g~n~~~~~~~~~~~~~~~~~~nt----d-~---~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~ 83 (502)
-|.||.|+|- |.-|..++..+.+.|.+ |..++-+. + . +.|.... .++..|.
T Consensus 9 ~k~KVlV~GaTG~iG~~lv~~Ll~~g~~-V~vl~R~~~~~~~k~~~~~~l~~~g--v~~v~gD----------------- 68 (346)
T 3i6i_A 9 PKGRVLIAGATGFIGQFVATASLDAHRP-TYILARPGPRSPSKAKIFKALEDKG--AIIVYGL----------------- 68 (346)
T ss_dssp --CCEEEECTTSHHHHHHHHHHHHTTCC-EEEEECSSCCCHHHHHHHHHHHHTT--CEEEECC-----------------
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCC-EEEEECCCCCCHHHHHHHHHHHHCC--CEEEEEE-----------------
T ss_conf 9991999898968999999999968994-8999899987755789998875089--3899930-----------------
Q ss_pred HHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEE
Q ss_conf 999729999997269989999803676667407899999998649849
Q gi|254781176|r 84 AAEECIDEITEMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLT 131 (502)
Q Consensus 84 ~a~~~~~~i~~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~ 131 (502)
..+.+.+..++++.+.+|++...++.. .....-+.+.|+..|...
T Consensus 69 --~~d~~~l~~a~~g~~~~~vi~~~~~~~-~~~~~~li~A~~~ag~~~ 113 (346)
T 3i6i_A 69 --INEQEAMEKILKEHEIDIVVSTVGGES-ILDQIALVKAMKAVGTIK 113 (346)
T ss_dssp --TTCHHHHHHHHHHTTCCEEEECCCGGG-GGGHHHHHHHHHHHCCCS
T ss_pred --CCCCCHHHHHHHCCCCCEEEECCCCCC-HHHHHHHHHHHHHCCCEE
T ss_conf --555103999962155323783378630-566677899999749658
No 170
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=54.46 E-value=1.2 Score=22.56 Aligned_cols=38 Identities=13% Similarity=0.198 Sum_probs=26.8
Q ss_pred CEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHH
Q ss_conf 61799996681479999999858998449998255788551
Q gi|254781176|r 15 PRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDAQALMM 55 (502)
Q Consensus 15 ~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~~~l~~ 55 (502)
.||.|||-|-.|....-.+...|++ .+..+.+...|.+
T Consensus 7 ~~VaViGaG~mG~~iA~~~a~~G~~---V~l~D~~~~~l~~ 44 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGGFR---VKLYDIEPRQITG 44 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCC---EEEECSCHHHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCC---EEEEECCHHHHHH
T ss_conf 9089988779999999999968992---8999799899999
No 171
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, ATP, protein turnover, ligase, conformational change, thioester, adenylation, transthioesterification, ATP-binding; 2.70A {Saccharomyces cerevisiae}
Probab=54.42 E-value=6.6 Score=17.04 Aligned_cols=32 Identities=19% Similarity=0.421 Sum_probs=27.6
Q ss_pred CCCEEEEEEECCCHHHHHHHHHHCCCCCCEEE
Q ss_conf 38617999966814799999998589984499
Q gi|254781176|r 13 LKPRITVFGVGGGGGNAVNNMVSSGLQGVNFV 44 (502)
Q Consensus 13 ~~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~ 44 (502)
.+-||.|+|.||.|+-++-+++..|+..+..+
T Consensus 26 ~~s~VliiG~~glG~Ei~KNLvL~GVg~itI~ 57 (1015)
T 3cmm_A 26 QTSNVLILGLKGLGVEIAKNVVLAGVKSMTVF 57 (1015)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHCCSEEEEE
T ss_pred HHCEEEEECCCHHHHHHHHHHHCCCCCEEEEE
T ss_conf 86959999986869999998410589759998
No 172
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=54.42 E-value=8.6 Score=16.18 Aligned_cols=98 Identities=14% Similarity=0.113 Sum_probs=58.1
Q ss_pred CCEEEEEEECCCHHHHHHHHHHCCCCCCEEEE-ECCCHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 86179999668147999999985899844999-82557885518997048515542556788888389999999729999
Q gi|254781176|r 14 KPRITVFGVGGGGGNAVNNMVSSGLQGVNFVV-ANTDAQALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAEECIDEI 92 (502)
Q Consensus 14 ~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~-~ntd~~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~~~~i 92 (502)
|.|+-|||.|.-|..-+..+.. ..++++++ ++.|...+....... |.. + +-.+.+++
T Consensus 5 kir~giIG~G~i~~~h~~~l~~--~~~~~l~av~d~~~~~~~~~a~~~----~~~--~--------------~~~~~~~l 62 (330)
T 3e9m_A 5 KIRYGIMSTAQIVPRFVAGLRE--SAQAEVRGIASRRLENAQKMAKEL----AIP--V--------------AYGSYEEL 62 (330)
T ss_dssp CEEEEECSCCTTHHHHHHHHHH--SSSEEEEEEBCSSSHHHHHHHHHT----TCC--C--------------CBSSHHHH
T ss_pred CCEEEEECCHHHHHHHHHHHHH--CCCCEEEEEECCCHHHHHHHHHHC----CCC--E--------------ECCCHHHH
T ss_conf 8589999883999999999974--899289999889999999999983----998--0--------------41999999
Q ss_pred HHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCC
Q ss_conf 99726998999980367666740789999999864984999950430004
Q gi|254781176|r 93 TEMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPFHFE 142 (502)
Q Consensus 93 ~~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf~~e 142 (502)
.+. .+.|.|+|. |-+-.-.-+++.|-+.|.-+ ++-+|+..-
T Consensus 63 l~~-~~iD~V~I~------tp~~~H~~~~~~al~~gk~v--~~EKPl~~~ 103 (330)
T 3e9m_A 63 CKD-ETIDIIYIP------TYNQGHYSAAKLALSQGKPV--LLEKPFTLN 103 (330)
T ss_dssp HHC-TTCSEEEEC------CCGGGHHHHHHHHHHTTCCE--EECSSCCSS
T ss_pred HCC-CCCCEEEEC------CCHHHHHHHHHHHHHCCCCE--EECCCCHHH
T ss_conf 548-999989989------97076899999999859957--640321122
No 173
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=53.91 E-value=2.4 Score=20.32 Aligned_cols=32 Identities=22% Similarity=0.201 Sum_probs=22.5
Q ss_pred EEEEEEECCCHHHHHHHHHHCCCCCCEEEEECC
Q ss_conf 179999668147999999985899844999825
Q gi|254781176|r 16 RITVFGVGGGGGNAVNNMVSSGLQGVNFVVANT 48 (502)
Q Consensus 16 ~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~nt 48 (502)
||.|+|-|.-|.-.-..+.+.+.+ |.++..|.
T Consensus 17 KI~ViGaG~~Gtala~~La~~g~~-V~l~~~~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCRE-VCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEE-EEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCE-EEEEECCH
T ss_conf 699989899999999999978996-89996299
No 174
>2jg1_A Tagatose-6-phosphate kinase; phosphoryl transfer, conformational changes, transferase, lactose metabolism; HET: MSE ANP TA6; 2.00A {Staphylococcus aureus} PDB: 2jgv_A* 2q5r_A*
Probab=53.20 E-value=9 Score=16.05 Aligned_cols=113 Identities=22% Similarity=0.255 Sum_probs=70.0
Q ss_pred EEEECCCHHHHHHHHHHCCCCCCEEE-EECCC-----HHHHHHCCCCEEEE-ECCC------------CCCCCCCCCCHH
Q ss_conf 99966814799999998589984499-98255-----78855189970485-1554------------255678888838
Q gi|254781176|r 19 VFGVGGGGGNAVNNMVSSGLQGVNFV-VANTD-----AQALMMSKAKQIIQ-LGSG------------ITEGLGAGSHPE 79 (502)
Q Consensus 19 v~g~gg~g~n~~~~~~~~~~~~~~~~-~~ntd-----~~~l~~~~~~~~~~-~g~~------------~~~g~g~g~~~~ 79 (502)
-...||+|.|+--.+...|.. +.|+ .+.-| .+.|....++.... +... .|.=...| |+
T Consensus 52 ~~~~GG~~~NvA~~l~~LG~~-~~~~~~vG~d~G~~i~~~L~~~GV~~~~v~~~~~t~t~i~~~~~g~~~~i~~~g--~~ 128 (330)
T 2jg1_A 52 SKTAGGKGLNVTRVLAQVGEP-VLASGFIGGELGQFIAKKLDHADIKHAFYNIKGETRNCIAILHEGQQTEILEQG--PE 128 (330)
T ss_dssp EEEEECHHHHHHHHHHHHTCC-EEEEEEEEHHHHHHHHHHHHHTTCEECCEEESSCCEEEEEEEETTEEEEEEECC--CB
T ss_pred EECCCCHHHHHHHHHHHCCCC-EEEEEEECCHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEECCCCEEEEECCC--CC
T ss_conf 873697899999999987998-799998073789999999997399834799508983689997489717996278--88
Q ss_pred HHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEE
Q ss_conf 9999999729999997269989999803676667407899999998649849999
Q gi|254781176|r 80 VGRAAAEECIDEITEMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGV 134 (502)
Q Consensus 80 ~g~~~a~~~~~~i~~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~ 134 (502)
+.........+.+.+.+...+.+++..-...+......-.+++.+++.+..++.-
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d 183 (330)
T 2jg1_A 129 IDNQEAAGFIKHFEQMMEKVEAVAISGSLPKGLNQDYYAQIIERCQNKGVPVILD 183 (330)
T ss_dssp CCHHHHHHHHHHHHHHGGGCSEEEEESCCCBTSCTTHHHHHHHHHHTTTCCEEEE
T ss_pred CCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCC
T ss_conf 8989999999999975233789998676545589999999999999729951025
No 175
>1f20_A Nitric-oxide synthase; nitric-xoide synthase, reductase domain, FAD, NADP+, oxidoreductase; HET: FAD NAP; 1.90A {Rattus norvegicus} SCOP: b.43.4.1 c.25.1.4
Probab=53.02 E-value=7.5 Score=16.60 Aligned_cols=29 Identities=3% Similarity=-0.020 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHCCCCCCCCHHHHHHHHCC
Q ss_conf 99888887651665555898787876415
Q gi|254781176|r 195 SGVSCITDLMIKEGLINLDFADVRSVMRN 223 (502)
Q Consensus 195 ~~v~~i~~~i~~~g~in~df~d~~~v~~~ 223 (502)
..-..+.|++..-.-+.+.++.+..+|.-
T Consensus 179 ~~~~~~ld~l~~f~~~~~pl~~ll~~lp~ 207 (435)
T 1f20_A 179 GKNPTMVEVLEEFPSIQMPATLLLTQLSL 207 (435)
T ss_dssp HHCCCHHHHHHHSTTBCBCHHHHHHHSCB
T ss_pred CCCCCHHHHHHHCCCCCCCHHHHHHHCCC
T ss_conf 16886899998565567899999853757
No 176
>2v4u_A CTP synthase 2; pyrimidine biosynthesis, glutamine amidotransferase, glutaminase domain, 5-OXO-L-norleucine, DON, ligase, phosphoprotein; HET: CYD; 2.3A {Homo sapiens} PDB: 2vkt_A
Probab=52.71 E-value=9.1 Score=15.99 Aligned_cols=45 Identities=29% Similarity=0.253 Sum_probs=26.8
Q ss_pred HHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEE
Q ss_conf 9999972699899998036766674078999999986498499995
Q gi|254781176|r 90 DEITEMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVV 135 (502)
Q Consensus 90 ~~i~~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v 135 (502)
+...+.|.+.|=++|..|+| --|.-..=..++.||+.++-.+|++
T Consensus 82 ~~~~~~L~~~dGIlVPGGFG-~RGieGkI~Ai~yARen~IPfLGIC 126 (289)
T 2v4u_A 82 HEAWQKLCKADGILVPGGFG-IRGTLGKLQAISWARTKKIPFLGVX 126 (289)
T ss_dssp HHHHHHHHHCSEEEECSCCS-STTHHHHHHHHHHHHHTTCCEEEET
T ss_pred HHHHHHHCCCCEEEECCCCC-CCCHHHHHHHHHHHHHCCCCCHHHH
T ss_conf 67898743488379689788-7761589999999998499702356
No 177
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=52.69 E-value=8.9 Score=16.07 Aligned_cols=19 Identities=16% Similarity=0.006 Sum_probs=12.5
Q ss_pred HHHHHHHHCCCEEEEEEEC
Q ss_conf 9999998649849999504
Q gi|254781176|r 119 IIAKIARNKGVLTVGVVTK 137 (502)
Q Consensus 119 ~ia~~a~~~~~~~~~~v~~ 137 (502)
..+.+||.+|+-.|.+++.
T Consensus 181 ~a~~~a~~~g~~~v~~~~~ 199 (352)
T 3fpc_A 181 MSVAGANHLGAGRIFAVGS 199 (352)
T ss_dssp HHHHHHHTTTCSSEEEECC
T ss_pred HHHHHHHHCCCCEEEEECC
T ss_conf 2799999849937999549
No 178
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreductase, porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=52.53 E-value=9.2 Score=15.97 Aligned_cols=71 Identities=13% Similarity=0.130 Sum_probs=39.7
Q ss_pred CEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCC--HHHHHHCCCCEEEEECCCCCCCC--------CCCCCHHHHHHH
Q ss_conf 61799996681479999999858998449998255--78855189970485155425567--------888883899999
Q gi|254781176|r 15 PRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTD--AQALMMSKAKQIIQLGSGITEGL--------GAGSHPEVGRAA 84 (502)
Q Consensus 15 ~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd--~~~l~~~~~~~~~~~g~~~~~g~--------g~g~~~~~g~~~ 84 (502)
-++.|||=|..|..-+..+.+.|-. |..|+-.-. .+.|... ..--.+-+..+.+. -|-.|+++-++.
T Consensus 32 k~VLVVGgG~vA~rKi~~Ll~~ga~-VtVisp~~~~el~~l~~~--~~i~~~~r~~~~~dl~~~~lViaAT~d~~lN~~i 108 (223)
T 3dfz_A 32 RSVLVVGGGTIATRRIKGFLQEGAA-ITVVAPTVSAEINEWEAK--GQLRVKRKKVGEEDLLNVFFIVVATNDQAVNKFV 108 (223)
T ss_dssp CCEEEECCSHHHHHHHHHHGGGCCC-EEEECSSCCHHHHHHHHT--TSCEEECSCCCGGGSSSCSEEEECCCCTHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCE-EEEEECCCCHHHHHHHHC--CCCEEEECCCCHHHCCCCCEEEECCCCHHHHHHH
T ss_conf 8599989889999999999748997-999938899899999976--9969995688866718964999778979999999
Q ss_pred HHHH
Q ss_conf 9972
Q gi|254781176|r 85 AEEC 88 (502)
Q Consensus 85 a~~~ 88 (502)
+...
T Consensus 109 ~~~a 112 (223)
T 3dfz_A 109 KQHI 112 (223)
T ss_dssp HHHS
T ss_pred HHHH
T ss_conf 9999
No 179
>1tlt_A Putative oxidoreductase (virulence factor MVIM homolog); structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=52.44 E-value=9.2 Score=15.97 Aligned_cols=95 Identities=20% Similarity=0.214 Sum_probs=55.0
Q ss_pred CCEEEEEEECCCHHHH-HHHHHHCCCCCCEEEEE-CCCHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 8617999966814799-99999858998449998-255788551899704851554255678888838999999972999
Q gi|254781176|r 14 KPRITVFGVGGGGGNA-VNNMVSSGLQGVNFVVA-NTDAQALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAEECIDE 91 (502)
Q Consensus 14 ~~~i~v~g~gg~g~n~-~~~~~~~~~~~~~~~~~-ntd~~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~~~~ 91 (502)
|.||-|||.|..|.+. +..+. ...+++++++ +.|...+.... +.+|.- .-.+.++
T Consensus 5 kikigiiG~G~~~~~~~~~~l~--~~~~~~l~av~d~~~~~~~~~~------------~~~~~~---------~~~~~~~ 61 (319)
T 1tlt_A 5 KLRIGVVGLGGIAQKAWLPVLA--AASDWTLQGAWSPTRAKALPIC------------ESWRIP---------YADSLSS 61 (319)
T ss_dssp CEEEEEECCSTHHHHTHHHHHH--SCSSEEEEEEECSSCTTHHHHH------------HHHTCC---------BCSSHHH
T ss_pred CCEEEEEECCHHHHHHHHHHHH--HCCCCEEEEEECCCHHHHHHHH------------HHHCCC---------CCCCHHH
T ss_conf 8889999388999999999997--3999689999889999999999------------982998---------2288999
Q ss_pred HHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCC
Q ss_conf 999726998999980367666740789999999864984999950430004
Q gi|254781176|r 92 ITEMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPFHFE 142 (502)
Q Consensus 92 i~~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf~~e 142 (502)
++.+.|.|+|+ |-+..-.-+++.|-+.|.-+ ++-+||..-
T Consensus 62 ---l~~~~D~V~I~------tp~~~H~~~~~~al~~gkhv--~~EKP~~~~ 101 (319)
T 1tlt_A 62 ---LAASCDAVFVH------SSTASHFDVVSTLLNAGVHV--CVDKPLAEN 101 (319)
T ss_dssp ---HHTTCSEEEEC------SCTTHHHHHHHHHHHTTCEE--EEESSSCSS
T ss_pred ---HHCCCCEEEEE------CCCHHHHHHHHHHHHCCCEE--EEECCCHHH
T ss_conf ---85699999994------88666689999998619879--996365024
No 180
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=52.35 E-value=9.2 Score=15.95 Aligned_cols=107 Identities=16% Similarity=0.161 Sum_probs=59.2
Q ss_pred EEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 17999966814799999998589984499982557885518997048515542556788888389999999729999997
Q gi|254781176|r 16 RITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDAQALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAEECIDEITEM 95 (502)
Q Consensus 16 ~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~~~~i~~~ 95 (502)
||-+||.|--|...+..+... ++++.++- | +..-..++. .+.++ .
T Consensus 2 kVgIIG~G~iG~~v~~~l~~~---~~el~~v~-d-----~~~~~~~~~-----------------------~~~de---~ 46 (236)
T 2dc1_A 2 LVGLIGYGAIGKFLAEWLERN---GFEIAAIL-D-----VRGEHEKMV-----------------------RGIDE---F 46 (236)
T ss_dssp EEEEECCSHHHHHHHHHHHHT---TCEEEEEE-C-----SSCCCTTEE-----------------------SSHHH---H
T ss_pred EEEEECCCHHHHHHHHHHHHC---CCEEEEEE-E-----CCCCCCCCC-----------------------CCHHH---H
T ss_conf 799995888999999999719---98899999-6-----785022444-----------------------89999---9
Q ss_pred H-CCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 2-6998999980367666740789999999864984999950430004067888899999999986333545027
Q gi|254781176|r 96 L-DKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPFHFEGSRRMRVAESGIEALQETVDTLIVIPN 169 (502)
Q Consensus 96 ~-~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf~~eg~~r~~~a~~~~~~l~~~~d~~i~i~n 169 (502)
+ ...|+|+++++ ..+..-+++-+=+.|+-++..-+.-|.-++. .+-|.++-+...+.+.+|.
T Consensus 47 l~~~~DvVie~a~------~~a~~e~a~~~L~~G~~vvv~S~galad~~~------~~~L~~~A~~~g~~l~i~s 109 (236)
T 2dc1_A 47 LQREMDVAVEAAS------QQAVKDYAEKILKAGIDLIVLSTGAFADRDF------LSRVREVCRKTGRRVYIAS 109 (236)
T ss_dssp TTSCCSEEEECSC------HHHHHHHHHHHHHTTCEEEESCGGGGGSHHH------HHHHHHHHHHHCCCEEECC
T ss_pred HCCCCCEEEEECC------CCCCHHHHHHHHHCCCCEEEEECHHHCCCHH------HHHHHHHHHHCCCCEEECC
T ss_conf 4388878999069------7404799999997399799962216317349------9999999986588378442
No 181
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=52.29 E-value=5.2 Score=17.81 Aligned_cols=97 Identities=13% Similarity=0.193 Sum_probs=53.8
Q ss_pred CCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 86179999668147999999985899844999825578855189970485155425567888883899999997299999
Q gi|254781176|r 14 KPRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDAQALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAEECIDEIT 93 (502)
Q Consensus 14 ~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~~~~i~ 93 (502)
.-||.|||-|..|.-++.+|.. .+.+.+.+|-.......... .+|-+.. ..+++.
T Consensus 21 ~kkilvIGaG~~~~~~a~~L~~---~~~~v~v~nRt~~ka~~la~----~~~~~~~------------------~~~~l~ 75 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSY---PQYKVTVAGRNIDHVRAFAE----KYEYEYV------------------LINDID 75 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCT---TTCEEEEEESCHHHHHHHHH----HHTCEEE------------------ECSCHH
T ss_pred CCEEEEECCHHHHHHHHHHHHH---CCCEEEEEECCHHHHHHHHH----HHCCCHH------------------HHHHHH
T ss_conf 9999999978999999999985---69846898199999999987----5052202------------------242089
Q ss_pred HHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCC
Q ss_conf 97269989999803676667407899999998649849999504300040
Q gi|254781176|r 94 EMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPFHFEG 143 (502)
Q Consensus 94 ~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf~~eg 143 (502)
++|.++|+||.+.+=. .|+|-+-....+.+.+-+ ..|-..|.
T Consensus 76 ~~l~~~DiVi~aT~s~-------~~ii~~~~~~~~~~iiDl-a~Pr~ie~ 117 (144)
T 3oj0_A 76 SLIKNNDVIITATSSK-------TPIVEERSLMPGKLFIDL-GNPPNIER 117 (144)
T ss_dssp HHHHTCSEEEECSCCS-------SCSBCGGGCCTTCEEEEC-CSSCSBCC
T ss_pred HHHHHCCEEEEECCCC-------CCEECHHHCCCCCEEEEE-CCCCCCCC
T ss_conf 9997679899923899-------744468784799789970-68865577
No 182
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=51.70 E-value=8.9 Score=16.06 Aligned_cols=44 Identities=20% Similarity=0.232 Sum_probs=34.3
Q ss_pred CEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHCCCCEE
Q ss_conf 61799996681479999999858998449998255788551899704
Q gi|254781176|r 15 PRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDAQALMMSKAKQI 61 (502)
Q Consensus 15 ~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~~~l~~~~~~~~ 61 (502)
-.+.|||=|=|||-|--.+-+.|++ |.+++.+||. |....|.+-
T Consensus 29 ~dViVIGgG~AG~EAA~~~A~~G~~-v~L~a~~~~~--~aelvCsnS 72 (651)
T 3ces_A 29 FDVIIIGGGHAGTEAAMAAARMGQQ-TLLLTHNIDT--LGQMSCNPA 72 (651)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC-EEEEESCGGG--TTCCSSSSE
T ss_pred CEEEEECCCHHHHHHHHHHHCCCCC-EEEEECCCCC--EEEEECCCC
T ss_conf 7089989878999999999828998-7999657456--378657644
No 183
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=51.36 E-value=9.1 Score=16.00 Aligned_cols=35 Identities=23% Similarity=0.401 Sum_probs=31.2
Q ss_pred EEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCHH
Q ss_conf 179999668147999999985899844999825578
Q gi|254781176|r 16 RITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDAQ 51 (502)
Q Consensus 16 ~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~~ 51 (502)
.+.|||=|=|||-|--.+-+.|++ |.+++.+||.-
T Consensus 23 dV~VIGgG~AG~EAA~~~Ar~G~~-v~L~t~~~~~~ 57 (641)
T 3cp8_A 23 DVIVVGAGHAGCEAALAVARGGLH-CLLITSDLSAV 57 (641)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCC-EEEEESCGGGT
T ss_pred CEEEECCCHHHHHHHHHHHHCCCC-EEEEECCCCCE
T ss_conf 679989877999999999808998-79996688873
No 184
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=50.88 E-value=9.7 Score=15.80 Aligned_cols=111 Identities=16% Similarity=0.192 Sum_probs=57.4
Q ss_pred CCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 86179999668147999999985899844999825578855189970485155425567888883899999997299999
Q gi|254781176|r 14 KPRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDAQALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAEECIDEIT 93 (502)
Q Consensus 14 ~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~~~~i~ 93 (502)
|.||.|+|--|-.+--+-+++.... .++++.+-.- .+.+.+++. .....+.-+..|+-.+.-...+.+ .
T Consensus 4 kikvaIvGAsGy~G~eL~~lL~~Hp-~~el~~v~~S-----~~~aG~~~~---~~~~~~~~~~~~~~~~~l~~~~~~--~ 72 (350)
T 2ep5_A 4 KIKVSLLGSTGMVGQKMVKMLAKHP-YLELVKVSAS-----PSKIGKKYK---DAVKWIEQGDIPEEVQDLPIVSTN--Y 72 (350)
T ss_dssp CEEEEEESCSSHHHHHHHHHHTTCS-SEEEEEEECC-----GGGTTSBHH---HHCCCCSSSSCCHHHHTCBEECSS--G
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC-CCEEEEEEEC-----CCCCCCCCH---HHCCCCCCCCCCCCCCCCEEEECC--H
T ss_conf 9889998941299999999997299-9608999961-----542786605---525520147763000363378667--6
Q ss_pred HHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCC
Q ss_conf 9726998999980367666740789999999864984999950430004
Q gi|254781176|r 94 EMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPFHFE 142 (502)
Q Consensus 94 ~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf~~e 142 (502)
..+.+.|+||++ +..|++.-++..+.+.|..+|-. .--|.++
T Consensus 73 ~~~~~~Dvvfla------lP~g~s~~~~~~~~~~g~~VIDl-SadfRl~ 114 (350)
T 2ep5_A 73 EDHKDVDVVLSA------LPNELAESIELELVKNGKIVVSN-ASPFRMD 114 (350)
T ss_dssp GGGTTCSEEEEC------CCHHHHHHHHHHHHHTTCEEEEC-SSTTTTC
T ss_pred HHHCCCCEEEEC------CCCHHHHHHHHHHHHCCCEEEEC-CHHHCCC
T ss_conf 572278789983------78145678899998779889828-4552445
No 185
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=50.54 E-value=6.8 Score=16.95 Aligned_cols=30 Identities=27% Similarity=0.328 Sum_probs=25.1
Q ss_pred EEEEEEECCCHHHHHHHHHHCCCCCCEEEEE
Q ss_conf 1799996681479999999858998449998
Q gi|254781176|r 16 RITVFGVGGGGGNAVNNMVSSGLQGVNFVVA 46 (502)
Q Consensus 16 ~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ 46 (502)
||.|+|.|+-|+=.--+|.+.|. .|.|++-
T Consensus 2 kI~IiGaGaiG~~~a~~L~~~G~-~V~l~~R 31 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGH-EVQGWLR 31 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred EEEEECCCHHHHHHHHHHHHCCC-CEEEEEE
T ss_conf 89999957999999999997899-3799973
No 186
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=50.45 E-value=9.8 Score=15.75 Aligned_cols=95 Identities=13% Similarity=0.063 Sum_probs=55.7
Q ss_pred CCEEEEEEE-CCCHHHHHHHHHHCCCCCCEEEEECCCH------HH-HHH-CCCCEEEEECCCCCCCCCCCCCHHHHHHH
Q ss_conf 861799996-6814799999998589984499982557------88-551-89970485155425567888883899999
Q gi|254781176|r 14 KPRITVFGV-GGGGGNAVNNMVSSGLQGVNFVVANTDA------QA-LMM-SKAKQIIQLGSGITEGLGAGSHPEVGRAA 84 (502)
Q Consensus 14 ~~~i~v~g~-gg~g~n~~~~~~~~~~~~~~~~~~ntd~------~~-l~~-~~~~~~~~~g~~~~~g~g~g~~~~~g~~~ 84 (502)
+-||.|+|- |.-|.++++.+.+.|.+ |..+.-++.. .. +.. ......+..| |
T Consensus 4 M~KILItGatG~iG~~l~~~L~~~G~~-V~~~~R~~~~~~~~~~~~~~~~~~~~~v~~v~~-----------D------- 64 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSFSHP-TFIYARPLTPDSTPSSVQLREEFRSMGVTIIEG-----------E------- 64 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTCC-EEEEECCCCTTCCHHHHHHHHHHHHTTCEEEEC-----------C-------
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCC-EEEEECCCCCCCCHHHHHHHHHHCCCCEEEEEE-----------E-------
T ss_conf 888999899828999999999978990-899989986655677888787641498199996-----------4-------
Q ss_pred HHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEE
Q ss_conf 99729999997269989999803676667407899999998649849
Q gi|254781176|r 85 AEECIDEITEMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLT 131 (502)
Q Consensus 85 a~~~~~~i~~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~ 131 (502)
..+.+.+..++.+.|.||-+++...- ...+.+...++..+...
T Consensus 65 -~~d~~~~~~~~~~~d~vi~~~~~~~~---~~~~~~~~a~~~~~~~~ 107 (321)
T 3c1o_A 65 -MEEHEKMVSVLKQVDIVISALPFPMI---SSQIHIINAIKAAGNIK 107 (321)
T ss_dssp -TTCHHHHHHHHTTCSEEEECCCGGGS---GGGHHHHHHHHHHCCCC
T ss_pred -CCCHHHHHHHCCCCCEEEECCCCCCC---CCCHHHHHHHHHCCCEE
T ss_conf -57704445424444588744666544---32122567776348546
No 187
>1m3s_A Hypothetical protein YCKF; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.95A {Bacillus subtilis} SCOP: c.80.1.3 PDB: 1viv_A
Probab=50.27 E-value=9.9 Score=15.73 Aligned_cols=56 Identities=18% Similarity=0.293 Sum_probs=39.6
Q ss_pred HCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 26998999980367666740789999999864984999950430004067888899999999986333545027
Q gi|254781176|r 96 LDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPFHFEGSRRMRVAESGIEALQETVDTLIVIPN 169 (502)
Q Consensus 96 ~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf~~eg~~r~~~a~~~~~~l~~~~d~~i~i~n 169 (502)
+..-|+||+...-|. | --.--.++.||+.|+-+|+|...|-+ .|.+++|-+|.+|-
T Consensus 77 l~~~Dl~I~iS~sG~-t--~~~~~~~~~ak~~g~~ii~IT~~~~s---------------~la~~ad~~l~~~~ 132 (186)
T 1m3s_A 77 LAEGDLVIIGSGSGE-T--KSLIHTAAKAKSLHGIVAALTINPES---------------SIGKQADLIIRMPG 132 (186)
T ss_dssp CCTTCEEEEECSSSC-C--HHHHHHHHHHHHTTCEEEEEESCTTS---------------HHHHHCSEEEECSC
T ss_pred CCCCCEEEEECCCCC-C--HHHHHHHHHHHHCCCEEEEEECCCCC---------------HHHHHCCEEEEECC
T ss_conf 999999999838975-1--46999999999879959999799999---------------67996899999789
No 188
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=49.82 E-value=3.2 Score=19.35 Aligned_cols=106 Identities=14% Similarity=0.183 Sum_probs=57.0
Q ss_pred CCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHCCCCEEEE------ECCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 86179999668147999999985899844999825578855189970485------155425567888883899999997
Q gi|254781176|r 14 KPRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDAQALMMSKAKQIIQ------LGSGITEGLGAGSHPEVGRAAAEE 87 (502)
Q Consensus 14 ~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~~~l~~~~~~~~~~------~g~~~~~g~g~g~~~~~g~~~a~~ 87 (502)
|.||.|+|.-|..+.-+-+++.... .++..++.+-.+ .+..+|. .|..+ |+....-...
T Consensus 8 kikvaIvGatGy~G~eL~rlL~~HP-~~el~~l~aS~~-----~aG~~i~~~~p~~~~~~~---------~~~~~~~~~~ 72 (354)
T 1ys4_A 8 KIKVGVLGATGSVGQRFVQLLADHP-MFELTALAASER-----SAGKKYKDACYWFQDRDI---------PENIKDMVVI 72 (354)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCS-SEEEEEEEECTT-----TTTSBHHHHSCCCCSSCC---------CHHHHTCBCE
T ss_pred CCEEEEECCCCHHHHHHHHHHHCCC-CCEEEEEEECCC-----CCCCCCHHHCCCCCCCCC---------CHHCCCCEEE
T ss_conf 7549999954399999999996599-967999997575-----489250430543257523---------2002672576
Q ss_pred HHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCC
Q ss_conf 299999972699899998036766674078999999986498499995043000
Q gi|254781176|r 88 CIDEITEMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPFHF 141 (502)
Q Consensus 88 ~~~~i~~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf~~ 141 (502)
..+.-...+++.|+||++.. .|.+.-++..+.+.|..++-- .--|.+
T Consensus 73 ~~~~~~~~~~~~DvvFlalP------~~~s~~~~~~l~~~g~~ViD~-S~~~R~ 119 (354)
T 1ys4_A 73 PTDPKHEEFEDVDIVFSALP------SDLAKKFEPEFAKEGKLIFSN-ASAYRM 119 (354)
T ss_dssp ESCTTSGGGTTCCEEEECCC------HHHHHHHHHHHHHTTCEEEEC-CSTTTT
T ss_pred ECCHHHHHHCCCCEEEECCC------CHHHHHHHHHHHHCCCEECCC-CHHHHC
T ss_conf 32502344237989998789------645689999999719730257-455413
No 189
>3c85_A Putative glutathione-regulated potassium-efflux system protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=49.66 E-value=10 Score=15.66 Aligned_cols=101 Identities=8% Similarity=0.103 Sum_probs=65.3
Q ss_pred HCCCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHC-CCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 438617999966814799999998589984499982557885518-9970485155425567888883899999997299
Q gi|254781176|r 12 ELKPRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDAQALMMS-KAKQIIQLGSGITEGLGAGSHPEVGRAAAEECID 90 (502)
Q Consensus 12 ~~~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~~~l~~~-~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~~~ 90 (502)
....+|-|+|.|--|-.++..+...+. -.+++++.|.+..... ........|. +.||+
T Consensus 37 ~~~~hviI~G~GrvG~~ia~~L~~~~~--~~~vviD~d~~~v~~l~~~g~~~v~gD--------~~d~~----------- 95 (183)
T 3c85_A 37 PGHAQVLILGMGRIGTGAYDELRARYG--KISLGIEIREEAAQQHRSEGRNVISGD--------ATDPD----------- 95 (183)
T ss_dssp CTTCSEEEECCSHHHHHHHHHHHHHHC--SCEEEEESCHHHHHHHHHTTCCEEECC--------TTCHH-----------
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHHCC--CEEEEEECCHHHHHHHHCCCCEEEECC--------CCCHH-----------
T ss_conf 789978998988899999999998489--869999388188788630461389868--------99999-----------
Q ss_pred HHHHH--HCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCC--EEEEEEECC
Q ss_conf 99997--2699899998036766674078999999986498--499995043
Q gi|254781176|r 91 EITEM--LDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGV--LTVGVVTKP 138 (502)
Q Consensus 91 ~i~~~--~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~--~~~~~v~~p 138 (502)
-+.++ ++.+++|+++.+ ..-..-.++..||+++. -+++.+..+
T Consensus 96 ~L~~a~~~~~a~~vi~~~~-----~~~~n~~~~~~~r~~~~~~~Iiara~~~ 142 (183)
T 3c85_A 96 FWERILDTGHVKLVLLAMP-----HHQGNQTALEQLQRRNYKGQIAAIAEYP 142 (183)
T ss_dssp HHHTBCSCCCCCEEEECCS-----SHHHHHHHHHHHHHTTCCSEEEEEESSH
T ss_pred HHHHHCCCCCCCEEEECCC-----CHHHHHHHHHHHHHHCCCCEEEEEECCH
T ss_conf 9997149676749998168-----4079999999999878994799997799
No 190
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, PSI-2; 2.30A {Staphylococcus aureus subsp}
Probab=49.20 E-value=10 Score=15.66 Aligned_cols=32 Identities=13% Similarity=0.197 Sum_probs=26.7
Q ss_pred CCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEE
Q ss_conf 861799996681479999999858998449998
Q gi|254781176|r 14 KPRITVFGVGGGGGNAVNNMVSSGLQGVNFVVA 46 (502)
Q Consensus 14 ~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ 46 (502)
.-||.|+|.|.-|+=.-.+|.+.|.. |.|++-
T Consensus 2 ~MkI~IiGaGaiG~~~a~~L~~~G~~-Vtl~~r 33 (294)
T 3g17_A 2 SLSVAIIGPGAVGTTIAYELQQSLPH-TTLIGR 33 (294)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHHCTT-CEEEES
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCC-EEEEEC
T ss_conf 99899999689999999999955992-799973
No 191
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=49.12 E-value=10 Score=15.60 Aligned_cols=38 Identities=18% Similarity=0.428 Sum_probs=27.6
Q ss_pred CHHHCCCEEEEEEEC----CCHHHHHHHHHHCCCCCCEEEEECCCH
Q ss_conf 845438617999966----814799999998589984499982557
Q gi|254781176|r 9 DITELKPRITVFGVG----GGGGNAVNNMVSSGLQGVNFVVANTDA 50 (502)
Q Consensus 9 ~~~~~~~~i~v~g~g----g~g~n~~~~~~~~~~~~~~~~~~ntd~ 50 (502)
++++.| +|.|||.. ..|..++.+|...|. +.+.+|-..
T Consensus 10 ~~~~~K-sIAVVGaS~~~~k~g~~v~~~l~~~g~---~V~pVnP~~ 51 (138)
T 1y81_A 10 NSKEFR-KIALVGASKNPAKYGNIILKDLLSKGF---EVLPVNPNY 51 (138)
T ss_dssp ----CC-EEEEETCCSCTTSHHHHHHHHHHHTTC---EEEEECTTC
T ss_pred CCCCCC-EEEEECCCCCCCCHHHHHHHHHHHCCC---EEEEECCCC
T ss_conf 861047-799992169999829999999997899---899988998
No 192
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis W83}
Probab=49.09 E-value=10 Score=15.60 Aligned_cols=89 Identities=16% Similarity=0.210 Sum_probs=51.5
Q ss_pred HCCCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEE-CCCHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 43861799996681479999999858998449998-25578855189970485155425567888883899999997299
Q gi|254781176|r 12 ELKPRITVFGVGGGGGNAVNNMVSSGLQGVNFVVA-NTDAQALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAEECID 90 (502)
Q Consensus 12 ~~~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~-ntd~~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~~~ 90 (502)
.-|.||-|+|.|..|.-.+..+... .+++++++ +.|.. ++... ..+...- +
T Consensus 7 ~kkirv~iiG~G~mG~~~~~~l~~~--~~~elv~v~~~~~~---------~~~~~---~~~~~~~--------------~ 58 (304)
T 3bio_A 7 DKKIRAAIVGYGNIGRYALQALREA--PDFEIAGIVRRNPA---------EVPFE---LQPFRVV--------------S 58 (304)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHC--TTEEEEEEECC----------------C---CTTSCEE--------------S
T ss_pred CCCCEEEEECCCHHHHHHHHHHHCC--CCCEEEEEECCCHH---------HHHHH---CCCCCCH--------------H
T ss_conf 8984799989869999999999739--99489999858988---------84432---2687867--------------6
Q ss_pred HHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEE
Q ss_conf 999972699899998036766674078999999986498499995
Q gi|254781176|r 91 EITEMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVV 135 (502)
Q Consensus 91 ~i~~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v 135 (502)
.+ ..+.+.|+|+++ |++....-+++.+-+.|+-+|...
T Consensus 59 d~-~~~~~~D~vi~~------t~~~~~~~~~~~~l~~g~~vv~~~ 96 (304)
T 3bio_A 59 DI-EQLESVDVALVC------SPSREVERTALEILKKGICTADSF 96 (304)
T ss_dssp SG-GGSSSCCEEEEC------SCHHHHHHHHHHHHTTTCEEEECC
T ss_pred HH-HHCCCCCEEEEE------CCCHHHHHHHHHHHHHCCCEEEEC
T ss_conf 69-863589879990------795447999999998389779836
No 193
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=48.92 E-value=10 Score=15.58 Aligned_cols=15 Identities=13% Similarity=0.383 Sum_probs=8.5
Q ss_pred HHCCCCCCEEEEEEE
Q ss_conf 741688639998531
Q gi|254781176|r 288 EEVDSEANIILGATF 302 (502)
Q Consensus 288 ~~~~~~a~ii~G~~~ 302 (502)
.+.-.+++|++++..
T Consensus 260 ~~~i~~aDivI~~~~ 274 (381)
T 3p2y_A 260 EDAITKFDIVITTAL 274 (381)
T ss_dssp HHHHTTCSEEEECCC
T ss_pred HHCCCCCCEEEEEEE
T ss_conf 413434433588433
No 194
>3l6b_A Serine racemase; pyridoxal phosphate, PLP, isomerase; HET: PLP; 1.50A {Homo sapiens} PDB: 3l6r_A* 3hmk_A* 3l6c_A*
Probab=48.24 E-value=5 Score=17.93 Aligned_cols=71 Identities=18% Similarity=0.181 Sum_probs=30.6
Q ss_pred EEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCC
Q ss_conf 04851554255678888838999999972999999726998999980367666740789999999864984999950430
Q gi|254781176|r 60 QIIQLGSGITEGLGAGSHPEVGRAAAEECIDEITEMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPF 139 (502)
Q Consensus 60 ~~~~~g~~~~~g~g~g~~~~~g~~~a~~~~~~i~~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf 139 (502)
.+|.+-.+... . +|+-=..|...+.....+-. ...+...| +++ =+|.+|.+ +|-+|+.+|.-++.|+....
T Consensus 40 ~~i~lK~E~~n-p-tGSfK~Rga~~~l~~~~~~~-~~~~~~~v-v~a-SsGN~g~a----~A~~a~~~g~~~~vv~p~~~ 110 (346)
T 3l6b_A 40 RNLFFKCELFQ-K-TGSFKIRGALNAVRSLVPDA-LERKPKAV-VTH-SSGNHGQA----LTYAAKLEGIPAYIVVPQTA 110 (346)
T ss_dssp SEEEEEEGGGS-G-GGBTHHHHHHHHHHTTC------CCCSCE-EEE-CSSHHHHH----HHHHHHHTTCCEEEEEETTS
T ss_pred CEEEEEECCCC-C-CCCHHHHHHHHHHHHHHHHH-HHCCCCEE-EEE-CCCCHHHH----HHHHHHHHCCCCCCCCCCCC
T ss_conf 98999835889-8-56819999999999999978-76589889-996-89816999----99999970856201333430
No 195
>1t35_A Hypothetical protein YVDD, putative lysine decarboxylase; structural genomics target, NYSGXRC, PSI, protein structure initiative; 2.72A {Bacillus subtilis} SCOP: c.129.1.1
Probab=48.11 E-value=11 Score=15.50 Aligned_cols=87 Identities=18% Similarity=0.258 Sum_probs=49.8
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCH--------H
Q ss_conf 88883899999997299999972699899998036766674078999999986498499995043000406--------7
Q gi|254781176|r 74 AGSHPEVGRAAAEECIDEITEMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPFHFEGS--------R 145 (502)
Q Consensus 74 ~g~~~~~g~~~a~~~~~~i~~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf~~eg~--------~ 145 (502)
.|-+|.. .++|.+--..|.+ .+-.+|+ ||-..|.=-.+|+-|++.|..+++|+...+..+.. .
T Consensus 12 ~~~~~~~-~~~a~~lg~~La~--~g~~lV~------GGG~~GlM~ava~ga~~~gg~v~Gi~~~~l~~~~~~~~~~~~~i 82 (191)
T 1t35_A 12 PGGNEAY-KRKAAELGVYMAE--QGIGLVY------GGSRVGLMGTIADAIMENGGTAIGVMPSGLFSGEVVHQNLTELI 82 (191)
T ss_dssp CCSSTHH-HHHHHHHHHHHHH--TTCEEEE------CCCCSHHHHHHHHHHHTTTCCEEEEEETTCCHHHHTTCCCSEEE
T ss_pred CCCCCHH-HHHHHHHHHHHHH--CCCEEEE------CCCCHHHHHHHHHHHHHCCCCEEEECCHHHHHCCCCCCCCCEEE
T ss_conf 9969689-9999999999998--7996998------99858899999989997599343206504330236675566248
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 888899999999986333545027
Q gi|254781176|r 146 RMRVAESGIEALQETVDTLIVIPN 169 (502)
Q Consensus 146 r~~~a~~~~~~l~~~~d~~i~i~n 169 (502)
....-.+-...|-+.+|++|++|-
T Consensus 83 ~~~~~~~Rk~~m~~~sdafI~lPG 106 (191)
T 1t35_A 83 EVNGMHERKAKMSELADGFISMPG 106 (191)
T ss_dssp EESHHHHHHHHHHHHCSEEEECSC
T ss_pred EECCHHHHHHHHHHHCCEEEEECC
T ss_conf 958999998999974787899578
No 196
>3go6_A Ribokinase RBSK; phosphofructokinase, carbohydrate kinase, transferase; HET: RIB ADP; 1.98A {Mycobacterium tuberculosis} PDB: 3go7_A*
Probab=48.08 E-value=8.2 Score=16.32 Aligned_cols=133 Identities=17% Similarity=0.201 Sum_probs=70.1
Q ss_pred EEEECCCHHHHHHHHHHCCCCCCEEEE-ECCCH------HHHHHCCCC-------------EEEEECCCCCC--CCCCCC
Q ss_conf 999668147999999985899844999-82557------885518997-------------04851554255--678888
Q gi|254781176|r 19 VFGVGGGGGNAVNNMVSSGLQGVNFVV-ANTDA------QALMMSKAK-------------QIIQLGSGITE--GLGAGS 76 (502)
Q Consensus 19 v~g~gg~g~n~~~~~~~~~~~~~~~~~-~ntd~------~~l~~~~~~-------------~~~~~g~~~~~--g~g~g~ 76 (502)
..-.||++.|+.-.+...|.+ +.|+. +-.|. +.|....+. ..+.+...-.+ -.-.+.
T Consensus 52 ~~~~GG~a~Nva~~l~~LG~~-~~~i~~vg~D~~G~~i~~~l~~~gI~~~~i~~~~~~t~~~~i~~~~~g~~~~~~~~~~ 130 (310)
T 3go6_A 52 TRTPGGKGANQAVAAARAGAQ-VQFSGAFGDDPAAAQLRAHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLVAPGA 130 (310)
T ss_dssp EEEEECHHHHHHHHHHHTTCE-EEEECEECSSHHHHHHHHHHHHTTCBCTTCEECSSCCEEEEEEECTTSCEEEEEECGG
T ss_pred EEECCCHHHHHHHHHHHCCCC-EEEEEEECCCCCCCHHHHHHCCCCCCEECCCCCCCCCEEEEEEECCCCCEEEECCCCC
T ss_conf 994595799999999987998-7999996177532122210012454100012247884268998548885554014775
Q ss_pred CHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHH
Q ss_conf 83899999997299999972699899998036766674078999999986498499995043000406788889999999
Q gi|254781176|r 77 HPEVGRAAAEECIDEITEMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPFHFEGSRRMRVAESGIEA 156 (502)
Q Consensus 77 ~~~~g~~~a~~~~~~i~~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf~~eg~~r~~~a~~~~~~ 156 (502)
........+.+..++.+++...+ .-...-.+.+.+++.++.++--. .|+.. ....+..
T Consensus 131 ---------~~~~~~~~~~~~~~d~~~~~~~~----~~~~~~~~~~~~~~~~~~v~~~~-~~~~~--------~~~~~~~ 188 (310)
T 3go6_A 131 ---------NAHLTPVPSAVANCDVLLTQLEI----PVATALAAARAAQSADAVVMVNA-SPAGQ--------DRSSLQD 188 (310)
T ss_dssp ---------GGGCCCCTTTTTTCSEEEECSSS----CHHHHHHHHHHHHHTTCEEEEEC-CSSSC--------CHHHHHH
T ss_pred ---------CCCCCHHHHHHHCCCEEEECCCC----CHHHHHHHHHHHHHCCCCEECCC-CHHHH--------HHHHHHH
T ss_conf ---------31233446667408899880668----78999999999987599642257-37765--------2356899
Q ss_pred HHHHHHHHHHHHHHHHHHHC
Q ss_conf 99863335450278887413
Q gi|254781176|r 157 LQETVDTLIVIPNQNLFRIA 176 (502)
Q Consensus 157 l~~~~d~~i~i~n~~l~~~~ 176 (502)
|.+++|.+ ++|+.-++.+
T Consensus 189 l~~~~d~~--~~ne~Ea~~l 206 (310)
T 3go6_A 189 LAAIADVV--IANEHEANDW 206 (310)
T ss_dssp HHHHCSEE--EEEHHHHHHS
T ss_pred HHHCCCCC--CCCHHHHHHH
T ss_conf 97418722--4789999987
No 197
>2iyv_A Shikimate kinase, SK; transferase, aromatic amino acid biosynthesis, P-loop kinase, metal- binding, shikimate pathway; HET: ADP; 1.35A {Mycobacterium tuberculosis} SCOP: c.37.1.2 PDB: 2iyr_A* 2iyq_A* 2iyt_A 2iyu_A* 2iys_A* 2iyw_A* 2iyx_A* 2iyy_A* 2iyz_A* 2g1k_A* 1l4y_A* 1u8a_A* 1we2_A* 1zyu_A* 2dfn_A* 2dft_A* 2g1j_A 1l4u_A* 3baf_A*
Probab=47.92 E-value=5.5 Score=17.58 Aligned_cols=34 Identities=26% Similarity=0.639 Sum_probs=26.8
Q ss_pred CCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCH
Q ss_conf 8617999966814799999998589984499982557
Q gi|254781176|r 14 KPRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDA 50 (502)
Q Consensus 14 ~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~ 50 (502)
+|+|-++|.-|+|=.+|-++....+ |..|+ ++|.
T Consensus 2 ~~~Iil~G~~GsGKSTiak~La~~L-~~~~i--D~D~ 35 (184)
T 2iyv_A 2 APKAVLVGLPGSGKSTIGRRLAKAL-GVGLL--DTDV 35 (184)
T ss_dssp CCSEEEECSTTSSHHHHHHHHHHHH-TCCEE--EHHH
T ss_pred CCCEEEECCCCCCHHHHHHHHHHHH-CCCEE--ECCH
T ss_conf 9989998799998899999999996-98968--3887
No 198
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=46.92 E-value=11 Score=15.37 Aligned_cols=36 Identities=22% Similarity=0.285 Sum_probs=19.7
Q ss_pred CCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCC
Q ss_conf 6998999980367666740789999999864984999950430
Q gi|254781176|r 97 DKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPF 139 (502)
Q Consensus 97 ~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf 139 (502)
+..|+|+|=+|+.| -.-|--|.+.|+-|+-+--.|+
T Consensus 125 et~DVlVVG~G~AG-------L~AAi~Aae~GakVlvlEK~~~ 160 (571)
T 1y0p_A 125 DTVDVVVVGSGGAG-------FSAAISATDSGAKVILIEKEPV 160 (571)
T ss_dssp EECSEEEECCSHHH-------HHHHHHHHHTTCCEEEECSSSS
T ss_pred CCEEEEEECCCHHH-------HHHHHHHHHCCCCEEEEECCCC
T ss_conf 85039998986999-------9999999988994899967999
No 199
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomerase; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=46.11 E-value=6.7 Score=16.96 Aligned_cols=101 Identities=19% Similarity=0.246 Sum_probs=56.8
Q ss_pred CEEEEEEECC-CHHHHHHHHHHCCCCCCEEEEEC-----CCHHHHHH--CCCCEEEEECCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 6179999668-14799999998589984499982-----55788551--8997048515542556788888389999999
Q gi|254781176|r 15 PRITVFGVGG-GGGNAVNNMVSSGLQGVNFVVAN-----TDAQALMM--SKAKQIIQLGSGITEGLGAGSHPEVGRAAAE 86 (502)
Q Consensus 15 ~~i~v~g~gg-~g~n~~~~~~~~~~~~~~~~~~n-----td~~~l~~--~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~ 86 (502)
.||.|.|-.| -|.+.+..+++.|.. .++++ .....+.. ..-..++..| .++
T Consensus 2 ~KILVTGgtGfIG~~lv~~Ll~~g~~---V~~~d~~~~~~~~~~~~~~~~~~~~~~i~~-Di~----------------- 60 (347)
T 1orr_A 2 AKLLITGGCGFLGSNLASFALSQGID---LIVFDNLSRKGATDNLHWLSSLGNFEFVHG-DIR----------------- 60 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE---EEEEECCCSTTHHHHHHHHHTTCCCEEEEC-CTT-----------------
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCE---EEEEECCCCCCCHHHHHHHHCCCCCEEEEC-CCC-----------------
T ss_conf 88999288748999999999978398---999979886651667887502798189976-168-----------------
Q ss_pred HHHHHHHHHHC--CCCEEEEEECCCCCCCCCHHHH------------HHHHHHHCCCEEEEEEEC
Q ss_conf 72999999726--9989999803676667407899------------999998649849999504
Q gi|254781176|r 87 ECIDEITEMLD--KTHMCFVTAGMGGGTGTGAAPI------------IAKIARNKGVLTVGVVTK 137 (502)
Q Consensus 87 ~~~~~i~~~~~--~~~~~~~~ag~gggtgtg~~p~------------ia~~a~~~~~~~~~~v~~ 137 (502)
+.+.+.++++ ..|.||-+|+....+....-|. +.+.|+..++-.+-+.+.
T Consensus 61 -d~~~l~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~~~sS 124 (347)
T 1orr_A 61 -NKNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSS 124 (347)
T ss_dssp -CHHHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred -CHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf -9899999874326747998233233122234878877549999999999876413556656666
No 200
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, protein structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=46.08 E-value=11 Score=15.28 Aligned_cols=100 Identities=18% Similarity=0.167 Sum_probs=66.1
Q ss_pred HCCCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHCC-CCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 4386179999668147999999985899844999825578855189-970485155425567888883899999997299
Q gi|254781176|r 12 ELKPRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDAQALMMSK-AKQIIQLGSGITEGLGAGSHPEVGRAAAEECID 90 (502)
Q Consensus 12 ~~~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~~~l~~~~-~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~~~ 90 (502)
+++=.|-|+|.|--|-..+..|...| .++++++.|........ ....+.. |-+.+|++=++|
T Consensus 5 ~l~~HviI~G~g~~g~~l~~~L~~~~---~~vvvId~d~~~~~~~~~~g~~~i~--------GD~~~~~~L~~a------ 67 (140)
T 3fwz_A 5 DICNHALLVGYGRVGSLLGEKLLASD---IPLVVIETSRTRVDELRERGVRAVL--------GNAANEEIMQLA------ 67 (140)
T ss_dssp CCCSCEEEECCSHHHHHHHHHHHHTT---CCEEEEESCHHHHHHHHHTTCEEEE--------SCTTSHHHHHHT------
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCC---CCEEEEECCCHHHHHHHHCCCEEEE--------CCCCCHHHHHHH------
T ss_conf 77699999896889999999999789---9789998880775015653965885--------158999999972------
Q ss_pred HHHHHHCCCCEEEEEECCCCCCCC-CHHHHHHHHHHHCC--CEEEEEEECC
Q ss_conf 999972699899998036766674-07899999998649--8499995043
Q gi|254781176|r 91 EITEMLDKTHMCFVTAGMGGGTGT-GAAPIIAKIARNKG--VLTVGVVTKP 138 (502)
Q Consensus 91 ~i~~~~~~~~~~~~~ag~gggtgt-g~~p~ia~~a~~~~--~~~~~~v~~p 138 (502)
-++.++.|+++. +. -..-.++..+|+++ +-+++-+..|
T Consensus 68 ----~i~~a~~vi~~~------~~d~~n~~~~~~~r~l~p~~~iiar~~~~ 108 (140)
T 3fwz_A 68 ----HLECAKWLILTI------PNGYEAGEIVASARAKNPDIEIIARAHYD 108 (140)
T ss_dssp ----TGGGCSEEEECC------SCHHHHHHHHHHHHHHCSSSEEEEEESSH
T ss_pred ----CHHHHCEEEECC------CCHHHHHHHHHHHHHHCCCCEEEEEECCH
T ss_conf ----744518999987------98899999999999978998499998799
No 201
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate biosynthesis, PSI-2; 1.90A {Methylococcus capsulatus}
Probab=46.01 E-value=7.9 Score=16.47 Aligned_cols=36 Identities=25% Similarity=0.305 Sum_probs=27.3
Q ss_pred EEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCHHHH
Q ss_conf 17999966814799999998589984499982557885
Q gi|254781176|r 16 RITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDAQAL 53 (502)
Q Consensus 16 ~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~~~l 53 (502)
||.|+|.|+-|+=.--+|.+.|.. |.|++= ...+++
T Consensus 4 kI~IiGaGaiG~~~a~~L~~aG~~-Vtlv~R-~~~~ai 39 (320)
T 3i83_A 4 NILVIGTGAIGSFYGALLAKTGHC-VSVVSR-SDYETV 39 (320)
T ss_dssp EEEEESCCHHHHHHHHHHHHTTCE-EEEECS-TTHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCC-EEEEEC-CHHHHH
T ss_conf 899999689999999999848991-799979-579999
No 202
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=45.76 E-value=11 Score=15.29 Aligned_cols=26 Identities=23% Similarity=0.197 Sum_probs=19.9
Q ss_pred CCCCCHHHHHHHHHHHCCCEEEEEEE
Q ss_conf 66740789999999864984999950
Q gi|254781176|r 111 GTGTGAAPIIAKIARNKGVLTVGVVT 136 (502)
Q Consensus 111 gtgtg~~p~ia~~a~~~~~~~~~~v~ 136 (502)
-.++..|--|.+.||++|+-||++..
T Consensus 7 ~~~s~sal~i~~aAkelG~~Ti~v~~ 32 (334)
T 2r85_A 7 TYASHSALQILKGAKDEGFETIAFGS 32 (334)
T ss_dssp EESSTTHHHHHHHHHHTTCCEEEESC
T ss_pred EECCHHHHHHHHHHHHCCCEEEEEEC
T ss_conf 84335999999999987997999977
No 203
>3ff4_A Uncharacterized protein; structural genomics, PSI- 2, protein structure initiative, midwest center for structural genomics; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=45.51 E-value=12 Score=15.22 Aligned_cols=96 Identities=15% Similarity=0.185 Sum_probs=55.5
Q ss_pred CEEEEEEE----CCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHCCCCEEEEECCCCCCCCCCCCCHH-----HHHHHH
Q ss_conf 61799996----681479999999858998449998255788551899704851554255678888838-----999999
Q gi|254781176|r 15 PRITVFGV----GGGGGNAVNNMVSSGLQGVNFVVANTDAQALMMSKAKQIIQLGSGITEGLGAGSHPE-----VGRAAA 85 (502)
Q Consensus 15 ~~i~v~g~----gg~g~n~~~~~~~~~~~~~~~~~~ntd~~~l~~~~~~~~~~~g~~~~~g~g~g~~~~-----~g~~~a 85 (502)
-+|.|||. +..|+-++.+|.+.|. ..+.+|.-...+ .|....+.+-.-.+|+ +.....
T Consensus 5 K~iaVvGaS~~~~k~g~~v~~~L~~~G~---~V~pVnP~~~~I----------~G~~~~~sl~~p~~iD~v~i~~p~~~~ 71 (122)
T 3ff4_A 5 KKTLILGATPETNRYAYLAAERLKSHGH---EFIPVGRKKGEV----------LGKTIINERPVIEGVDTVTLYINPQNQ 71 (122)
T ss_dssp CCEEEETCCSCTTSHHHHHHHHHHHHTC---CEEEESSSCSEE----------TTEECBCSCCCCTTCCEEEECSCHHHH
T ss_pred CEEEEEEECCCCCCHHHHHHHHHHHCCC---EEEEECCCCCCC----------CEEEEEECCCCCCCCCEEEEEECHHHH
T ss_conf 6499996669999829999999997899---899988877610----------005899745567887579999588998
Q ss_pred HHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEE
Q ss_conf 97299999972699899998036766674078999999986498499
Q gi|254781176|r 86 EECIDEITEMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTV 132 (502)
Q Consensus 86 ~~~~~~i~~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~ 132 (502)
.+-.+++.+. |...|++..|.. .+-+.++|++.|+-++
T Consensus 72 ~~~v~e~~~~--g~k~vw~q~G~~-------~e~~~~~a~~~Gi~vi 109 (122)
T 3ff4_A 72 LSEYNYILSL--KPKRVIFNPGTE-------NEELEEILSENGIEPV 109 (122)
T ss_dssp GGGHHHHHHH--CCSEEEECTTCC-------CHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHC--CCCEEEEECCCC-------CHHHHHHHHHCCCEEE
T ss_conf 9999999853--999999936987-------9999999999699799
No 204
>3n0x_A Possible substrate binding protein of ABC transpo system; receptor family ligand binding region, structural genomics; HET: MSE; 1.50A {Rhodopseudomonas palustris}
Probab=45.03 E-value=12 Score=15.17 Aligned_cols=53 Identities=19% Similarity=0.270 Sum_probs=39.2
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEEC
Q ss_conf 8888389999999729999997269989999803676667407899999998649849999504
Q gi|254781176|r 74 AGSHPEVGRAAAEECIDEITEMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTK 137 (502)
Q Consensus 74 ~g~~~~~g~~~a~~~~~~i~~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~ 137 (502)
.+++|..+.++|.+-.++ ++.++|| |..+|+.+..++.++++.+++++...+.
T Consensus 54 ~~~~~~~a~~~a~~li~~-----~~v~~ii------G~~~S~~~~a~~~~~~~~~vp~i~~~s~ 106 (374)
T 3n0x_A 54 DQSKPDLSKAALAEAYQD-----DGADIAI------GTSSSAAALADLPVAEENKKILIVEPAV 106 (374)
T ss_dssp CTTCHHHHHHHHHHHHHT-----SCCSEEE------ECSSHHHHHHHHHHHHHHTCCEEECSCC
T ss_pred CCCCHHHHHHHHHHHHHC-----CCCEEEE------CCCCCHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 899989999999999865-----8966996------5776368899999999609741025654
No 205
>2iwb_A Methicillin resistance MECR1 protein; antibiotic resistance, bacterial antibiotic resistance, methicillin resistance, beta-lactamic antibiotics, MRSA; 1.8A {Staphylococcus aureus} PDB: 2iwc_A* 2iwd_A*
Probab=44.80 E-value=12 Score=15.14 Aligned_cols=74 Identities=11% Similarity=0.107 Sum_probs=38.1
Q ss_pred CCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
Q ss_conf 67407899999998649849999504300040678888999999999863335450278887413665318999744679
Q gi|254781176|r 112 TGTGAAPIIAKIARNKGVLTVGVVTKPFHFEGSRRMRVAESGIEALQETVDTLIVIPNQNLFRIANDKTTFADAFSMADQ 191 (502)
Q Consensus 112 tgtg~~p~ia~~a~~~~~~~~~~v~~pf~~eg~~r~~~a~~~~~~l~~~~d~~i~i~n~~l~~~~~~~~~~~~af~~~d~ 191 (502)
-||--=|+++-+|=|.|+++- ...|.+.|..+.. . .-....+++.+||+.+.+
T Consensus 50 PGStfK~~t~~aaLe~g~~~~---~~~~~~~~~~~~~--------------------~----~~~~g~~~l~~Al~~S~N 102 (246)
T 2iwb_A 50 PNSTYKIYLALMAFDQNLLSL---NHTEQQWDKHQYP--------------------F----KEWNQDQNLNSSMKYSVN 102 (246)
T ss_dssp CGGGGHHHHHHHHHHTTSSBT---TBCCBCCCCCCCS--------------------S----GGGSSCBCHHHHHHTTCH
T ss_pred CCCHHHHHHHHHHHHCCCCCC---CCCCCCCCCCCCC--------------------C----CCCCCCCCHHHHHHCCCH
T ss_conf 963699999999998499788---5434169986617--------------------8----988997077884224562
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCC
Q ss_conf 99999888887651665555898787876415
Q gi|254781176|r 192 VLYSGVSCITDLMIKEGLINLDFADVRSVMRN 223 (502)
Q Consensus 192 ~l~~~v~~i~~~i~~~g~in~df~d~~~v~~~ 223 (502)
+...-+ . ..|....++..++.
T Consensus 103 ~~~~~l------a-----~~lG~~~~~~~~~~ 123 (246)
T 2iwb_A 103 WYYENL------N-----KHLRQDEVKSYLDL 123 (246)
T ss_dssp HHHHHH------H-----TTSCHHHHHHHHHH
T ss_pred HHHHHH------H-----HHCCCCHHHHHHHH
T ss_conf 999999------9-----87286078999998
No 206
>2v78_A Fructokinase; transferase, PFKB family carbohydrate kinase, 2- keto-3-deoxygluconate kinase; 2.00A {Sulfolobus solfataricus} PDB: 2var_A*
Probab=44.72 E-value=12 Score=15.14 Aligned_cols=40 Identities=15% Similarity=0.081 Sum_probs=29.8
Q ss_pred EEEECCCHHHHHHHHHHCCCCCCEEE-EECCCH------HHHHHCCCC
Q ss_conf 99966814799999998589984499-982557------885518997
Q gi|254781176|r 19 VFGVGGGGGNAVNNMVSSGLQGVNFV-VANTDA------QALMMSKAK 59 (502)
Q Consensus 19 v~g~gg~g~n~~~~~~~~~~~~~~~~-~~ntd~------~~l~~~~~~ 59 (502)
...+||+|.|+...+.+.|.+ |.|+ ++-.|. +.|....++
T Consensus 29 ~~~~GG~~~Nva~~l~~lG~~-v~~i~~vG~D~~g~~i~~~l~~~gI~ 75 (313)
T 2v78_A 29 EKHVAGSELNFCIAVVRNHLS-CSLIARVGNDEFGKNIIEYSRAQGID 75 (313)
T ss_dssp EEEEECHHHHHHHHHHHTTCC-EEEEEEEESSHHHHHHHHHHHHTTCB
T ss_pred EEECCCHHHHHHHHHHHCCCC-EEEEEEECCCHHHHHHHHHHHHCCCC
T ss_conf 884686799999999977998-79999946988999999998753456
No 207
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A*
Probab=44.39 E-value=12 Score=15.10 Aligned_cols=43 Identities=14% Similarity=0.207 Sum_probs=31.3
Q ss_pred CCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHCC
Q ss_conf 86179999668147999999985899844999825578855189
Q gi|254781176|r 14 KPRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDAQALMMSK 57 (502)
Q Consensus 14 ~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~~~l~~~~ 57 (502)
.-||.|||.|=.|.-.--.+-..|- +.+.+.++.|..-+...+
T Consensus 5 m~kI~ViGlGyVGl~~a~~lA~~g~-~~~V~g~Did~~~i~~l~ 47 (467)
T 2q3e_A 5 IKKICCIGAGYVGGPTCSVIAHMCP-EIRVTVVDVNESRINAWN 47 (467)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCT-TSEEEEECSCHHHHHHHT
T ss_pred CCEEEEECCCHHHHHHHHHHHHHCC-CCEEEEEECCHHHHHHHH
T ss_conf 8779998878526999999997399-984999989999999986
No 208
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=43.83 E-value=9.5 Score=15.87 Aligned_cols=48 Identities=2% Similarity=0.051 Sum_probs=34.8
Q ss_pred CCCCCHHHHHHHHHHHHHHHH-HHHHHHHHHCCCCCCCCHHHHHHHHCCC
Q ss_conf 366531899974467999999-8888876516655558987878764158
Q gi|254781176|r 176 ANDKTTFADAFSMADQVLYSG-VSCITDLMIKEGLINLDFADVRSVMRNM 224 (502)
Q Consensus 176 ~~~~~~~~~af~~~d~~l~~~-v~~i~~~i~~~g~in~df~d~~~v~~~~ 224 (502)
.++ .+--.+.+++++.+..+ +..+++.+..---..+|...+..++..+
T Consensus 181 ~G~-~G~g~~~Kl~~N~l~~~~~~a~aEa~~la~~~Gld~~~~~~vl~~s 229 (310)
T 3doj_A 181 LGQ-VGNGAKMKLIVNMIMGSMMNAFSEGLVLADKSGLSSDTLLDILDLG 229 (310)
T ss_dssp CSS-TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHS
T ss_pred ECC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHC
T ss_conf 799-7488899999999999999999999999863499999999999836
No 209
>3abq_B Ethanolamine ammonia-lyase light chain; (beta/alpha)8 fold, cobalt, cobalamin; HET: B12; 2.05A {Escherichia coli} PDB: 3abo_B* 3abr_B* 3abs_B*
Probab=43.76 E-value=9.2 Score=15.95 Aligned_cols=16 Identities=6% Similarity=0.125 Sum_probs=10.3
Q ss_pred HHHHHHHHHHHHHHHH
Q ss_conf 9999999986333545
Q gi|254781176|r 151 ESGIEALQETVDTLIV 166 (502)
Q Consensus 151 ~~~~~~l~~~~d~~i~ 166 (502)
.+.+.+|+++.++=|-
T Consensus 75 ~d~w~~Lr~~T~ARIg 90 (306)
T 3abq_B 75 ADVLTELRRSTVARVC 90 (306)
T ss_dssp HHHHHHHHHTCSSCCS
T ss_pred HHHHHHHHHCCHHHEE
T ss_conf 4099999843727503
No 210
>1jjv_A Dephospho-COA kinase; P-loop nucleotide-binding fold, structure 2 function project, S2F, structural genomics, transferase; HET: ATP; 2.00A {Haemophilus influenzae} SCOP: c.37.1.1
Probab=43.69 E-value=12 Score=15.03 Aligned_cols=17 Identities=24% Similarity=0.452 Sum_probs=7.8
Q ss_pred EEEECCCHHHHHHHHHH
Q ss_conf 99966814799999998
Q gi|254781176|r 19 VFGVGGGGGNAVNNMVS 35 (502)
Q Consensus 19 v~g~gg~g~n~~~~~~~ 35 (502)
|.|-=|+|=.+|..++.
T Consensus 7 itG~igSGKStv~~~l~ 23 (206)
T 1jjv_A 7 LTGGIGSGKTTIANLFT 23 (206)
T ss_dssp EECSTTSCHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHH
T ss_conf 88998766999999999
No 211
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, tricarboxylic acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=43.64 E-value=12 Score=15.02 Aligned_cols=117 Identities=19% Similarity=0.192 Sum_probs=67.3
Q ss_pred CCCHHHCCCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHC---CCCEEEE--ECC-----------CCCC
Q ss_conf 78845438617999966814799999998589984499982557885518---9970485--155-----------4255
Q gi|254781176|r 7 NMDITELKPRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDAQALMMS---KAKQIIQ--LGS-----------GITE 70 (502)
Q Consensus 7 ~~~~~~~~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~~~l~~~---~~~~~~~--~g~-----------~~~~ 70 (502)
++.+++. -+.|||=|.||+-+-=...+.|.+ | +.+.- .....+ .+.--|. ++. .+.+
T Consensus 2 ~~~~~e~--DVlVVG~G~AGl~AAi~a~~~G~~-V--~lveK--~~~~~g~s~~A~GGi~a~~~~~~~Ds~e~~~~Dt~~ 74 (588)
T 2wdq_A 2 KLPVREF--DAVVIGAGGAGMRAALQISQSGQT-C--ALLSK--VFPTRSHTVSAQGGITVALGNTHEDNWEWHMYDTVK 74 (588)
T ss_dssp CSCEEEE--EEEEECCSHHHHHHHHHHHHTTCC-E--EEEES--SCGGGSGGGGCCSCEECCCCSSSCCCHHHHHHHHHH
T ss_pred CCCCEEC--CEEEECCCHHHHHHHHHHHHCCCC-E--EEEEC--CCCCCCHHHHHHHHHEEECCCCCCCCHHHHHHHHHH
T ss_conf 9987179--999999649999999999977994-8--99978--998997388984667667689999899999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEE--------------------------EEECCCCCCCCCHHHHHHHHH
Q ss_conf 678888838999999972999999726998999--------------------------980367666740789999999
Q gi|254781176|r 71 GLGAGSHPEVGRAAAEECIDEITEMLDKTHMCF--------------------------VTAGMGGGTGTGAAPIIAKIA 124 (502)
Q Consensus 71 g~g~g~~~~~g~~~a~~~~~~i~~~~~~~~~~~--------------------------~~ag~gggtgtg~~p~ia~~a 124 (502)
+-.--+||++-+.-++++.+.+..+.+ -.+-| .+..++.+||.+..+.+.+.+
T Consensus 75 ~g~~~~d~~lv~~~~~~s~~~i~~L~~-~Gv~f~r~~~G~~~~~~~~~~~~~~~g~~~~~~~~~~~~~G~~i~~~L~~~~ 153 (588)
T 2wdq_A 75 GSDYIGDQDAIEYMCKTGPEAILELEH-MGLPFSRLDDGRIYQRPFGGQSKNFGGEQAARTAAAADRTGHALLHTLYQQN 153 (588)
T ss_dssp HTTTCSCHHHHHHHHHHHHHHHHHHHH-TTCCCCBCTTSSBCEECCTTCBSTTTCSBCCCEECSTTCHHHHHHHHHHHHH
T ss_pred HCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHH
T ss_conf 638977899999999999999999997-7998652799877123246543135786455367627875999999999976
Q ss_pred HHCCCEE
Q ss_conf 8649849
Q gi|254781176|r 125 RNKGVLT 131 (502)
Q Consensus 125 ~~~~~~~ 131 (502)
++.|+.+
T Consensus 154 ~~~gv~i 160 (588)
T 2wdq_A 154 LKNHTTI 160 (588)
T ss_dssp HHTTCEE
T ss_pred HCCCCEE
T ss_conf 5179689
No 212
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=43.61 E-value=2.7 Score=19.87 Aligned_cols=120 Identities=13% Similarity=0.165 Sum_probs=58.8
Q ss_pred CEEEEEEECCCHHHHHHHHHHCCC------CCCEEEEECCC------HHHHHHCCCCEEEEECCCCCCCCCCCCCHH---
Q ss_conf 617999966814799999998589------98449998255------788551899704851554255678888838---
Q gi|254781176|r 15 PRITVFGVGGGGGNAVNNMVSSGL------QGVNFVVANTD------AQALMMSKAKQIIQLGSGITEGLGAGSHPE--- 79 (502)
Q Consensus 15 ~~i~v~g~gg~g~n~~~~~~~~~~------~~~~~~~~ntd------~~~l~~~~~~~~~~~g~~~~~g~g~g~~~~--- 79 (502)
-||.|+|-|--|.-.-+-+.+.+. ..|.+++.+.| .+.++...-..|.+-|..+.+.+=+-.+.+
T Consensus 9 kKI~ViGaGawGtALA~~La~n~~~~~~~~~~V~lw~r~~e~~~~~~~~~In~~~~n~~ylp~~~l~~~i~~t~~l~~~~ 88 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVAVPDVVQAA 88 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEEEESSHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCHHCCCCEEEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHH
T ss_conf 83999896999999999998526301026874699972533324569999984597832379984887544206799887
Q ss_pred ---------HHHHHHHHHHHHHHHHHC-CCCEEEEEECCCCCCCCC--HHHHHHHHHHHCCCEEEEEEECC
Q ss_conf ---------999999972999999726-998999980367666740--78999999986498499995043
Q gi|254781176|r 80 ---------VGRAAAEECIDEITEMLD-KTHMCFVTAGMGGGTGTG--AAPIIAKIARNKGVLTVGVVTKP 138 (502)
Q Consensus 80 ---------~g~~~a~~~~~~i~~~~~-~~~~~~~~ag~gggtgtg--~~p~ia~~a~~~~~~~~~~v~~p 138 (502)
+--++..+..++++..+. +.-+|.++-|+..+|++. .+-++.+.. +. .+++++=|
T Consensus 89 ~~~d~iiiavPS~~~~~~~~~~~~~l~~~~~iv~~~KG~~~~~~~~~~~se~i~~~~---~~-~~~~lsGP 155 (354)
T 1x0v_A 89 EDADILIFVVPHQFIGKICDQLKGHLKANATGISLIKGVDEGPNGLKLISEVIGERL---GI-PMSVLMGA 155 (354)
T ss_dssp TTCSEEEECCCGGGHHHHHHHHTTCSCTTCEEEECCCCBCSSSSSCCBHHHHHHHHH---TC-CEEEEECS
T ss_pred HCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCEEHHHHHHHHC---CC-CEEEEECC
T ss_conf 176577653505999999988777642254167741001017986413999888873---99-76998578
No 213
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha JMP134}
Probab=42.86 E-value=9.4 Score=15.88 Aligned_cols=31 Identities=16% Similarity=0.329 Sum_probs=25.4
Q ss_pred CEEEEEEECCCHHHHHHHHHHCCCCCCEEEEE
Q ss_conf 61799996681479999999858998449998
Q gi|254781176|r 15 PRITVFGVGGGGGNAVNNMVSSGLQGVNFVVA 46 (502)
Q Consensus 15 ~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ 46 (502)
=||.|+|.|.-|+=.-.+|.+.|.+ |.|++=
T Consensus 20 MkI~IlGaGaiGt~~A~~L~~aG~d-V~li~R 50 (318)
T 3hwr_A 20 MKVAIMGAGAVGCYYGGMLARAGHE-VILIAR 50 (318)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCE-EEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCC-EEEEEC
T ss_conf 9899999079999999999847990-899983
No 214
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=42.67 E-value=13 Score=14.92 Aligned_cols=87 Identities=18% Similarity=0.320 Sum_probs=50.6
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCHH--------
Q ss_conf 888838999999972999999726998999980367666740789999999864984999950430004067--------
Q gi|254781176|r 74 AGSHPEVGRAAAEECIDEITEMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPFHFEGSR-------- 145 (502)
Q Consensus 74 ~g~~~~~g~~~a~~~~~~i~~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf~~eg~~-------- 145 (502)
.|-+|.. .++|.+--..|.+ .+-.+|+ ||-..|.=-.+|+-|++.|..++||...-|..+...
T Consensus 20 ~~~~~~~-~~~a~~lG~~La~--~g~~lV~------GGG~~GlMgava~ga~~~gG~viGV~~~~l~~~e~~~~~~~~~~ 90 (216)
T 1ydh_A 20 SGHREVF-SDAAIELGNELVK--RKIDLVY------GGGSVGLMGLISRRVYEGGLHVLGIIPKALMPIEISGETVGDVR 90 (216)
T ss_dssp CCSSHHH-HHHHHHHHHHHHH--TTCEEEE------CCCSSHHHHHHHHHHHHTTCCEEEEEEGGGHHHHCCSSCCSEEE
T ss_pred CCCCCHH-HHHHHHHHHHHHH--CCCEEEE------CCCCHHHHHHHHHHHHHCCCCEEEECCHHHCCHHCCCCCCCEEE
T ss_conf 9969389-9999999999998--7994998------99818999999987874799557635023120220576566467
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 888899999999986333545027
Q gi|254781176|r 146 RMRVAESGIEALQETVDTLIVIPN 169 (502)
Q Consensus 146 r~~~a~~~~~~l~~~~d~~i~i~n 169 (502)
....-.+-...|-+.+|++|++|-
T Consensus 91 ~~~~~~eRk~~m~~~sdafIvlPG 114 (216)
T 1ydh_A 91 VVADMHERKAAMAQEAEAFIALPG 114 (216)
T ss_dssp EESSHHHHHHHHHHHCSEEEECSC
T ss_pred EECCHHHHHHHHHHCCEEEEECCC
T ss_conf 756799999987750608998488
No 215
>1o97_D Electron transferring flavoprotein alpha-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 c.31.1.2 PDB: 1o95_D* 1o96_B* 1o94_D* 3clu_D* 3clt_D* 3clr_D* 3cls_D*
Probab=42.65 E-value=13 Score=14.92 Aligned_cols=26 Identities=12% Similarity=-0.081 Sum_probs=12.2
Q ss_pred EEEEECCCCCCCCCHHHHHHHHHHHC
Q ss_conf 99980367666740789999999864
Q gi|254781176|r 102 CFVTAGMGGGTGTGAAPIIAKIARNK 127 (502)
Q Consensus 102 ~~~~ag~gggtgtg~~p~ia~~a~~~ 127 (502)
|++.+..-+|.=...+--+...||++
T Consensus 3 IlViaE~~~g~l~~~slEll~~A~~L 28 (320)
T 1o97_D 3 ILVIAEHRRNDLRPVSLELIGAANGL 28 (320)
T ss_dssp EEEECCEETTEECTHHHHHHHHHHHH
T ss_pred EEEEEEECCCEECHHHHHHHHHHHHH
T ss_conf 99999815999989999999999998
No 216
>1s4d_A Uroporphyrin-III C-methyltransferase; tetrapyrrole biosynthesis, cobalamin, SAM, SAH, uroporphyrinogen-III methyltransferase; HET: SAH; 2.70A {Pseudomonas denitrificans} SCOP: c.90.1.1
Probab=42.41 E-value=6.4 Score=17.12 Aligned_cols=100 Identities=14% Similarity=0.185 Sum_probs=48.3
Q ss_pred CCEEEEEEECCCHH-----HHHHHHHHCCCCCCEEEEECCC--HHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 86179999668147-----9999999858998449998255--7885518997048515542556788888389999999
Q gi|254781176|r 14 KPRITVFGVGGGGG-----NAVNNMVSSGLQGVNFVVANTD--AQALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAE 86 (502)
Q Consensus 14 ~~~i~v~g~gg~g~-----n~~~~~~~~~~~~~~~~~~ntd--~~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~ 86 (502)
|=|+.+||+|=+.- -+++.+- ..+.|++.+- .+.|............ +..+..-.....
T Consensus 14 ~Gkly~VG~GPGdp~~lTl~A~~aL~-----~ADvv~~~~~~~~~~l~~~~~~~~~~~~---------~~~~~~~~~~~~ 79 (280)
T 1s4d_A 14 KGSVWLVGAGPGDPGLLTLHAANALR-----QADVIVHDALVNEDCLKLARPGAVLEFA---------GKRGGKPSPKQR 79 (280)
T ss_dssp SSCEEEEECBSSCTTSSBHHHHHHHH-----HCSEEEECSCSCTTGGGGSSTTCCEEEC---------SCCC--CCCCHH
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHH-----CCCEEEEECCCCHHHHHHCCCCCEEEEC---------CCCCCCCCCCHH
T ss_conf 82899997489997899999999997-----3999998067298999546788699814---------653554322199
Q ss_pred HHHHHHHH-HHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCC
Q ss_conf 72999999-72699899998036766674078999999986498
Q gi|254781176|r 87 ECIDEITE-MLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGV 129 (502)
Q Consensus 87 ~~~~~i~~-~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~ 129 (502)
+..+++.+ +-+|-+++++..|-.+-.+++...+ +.+++.++
T Consensus 80 ~~~~~~~~~a~~g~~V~~l~~Gdp~~~~~~~~~~--~~~~~~~~ 121 (280)
T 1s4d_A 80 DISLRLVELARAGNRVLRLKGGDPFVFGRGGEEA--LTLVEHQV 121 (280)
T ss_dssp HHHHHHHHHHHTTCCEEEEESBCTTSSSSHHHHH--HHHHTTTC
T ss_pred HHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHH--HHHHHCCC
T ss_conf 9999999999779919999789986304279999--99996589
No 217
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=42.04 E-value=13 Score=14.85 Aligned_cols=144 Identities=17% Similarity=0.209 Sum_probs=75.7
Q ss_pred CCHHHC---CCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEE-CCCHHHHHHC-------CCC-EEEEECCCCCCCCCCC
Q ss_conf 884543---861799996681479999999858998449998-2557885518-------997-0485155425567888
Q gi|254781176|r 8 MDITEL---KPRITVFGVGGGGGNAVNNMVSSGLQGVNFVVA-NTDAQALMMS-------KAK-QIIQLGSGITEGLGAG 75 (502)
Q Consensus 8 ~~~~~~---~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~-ntd~~~l~~~-------~~~-~~~~~g~~~~~g~g~g 75 (502)
+++..+ |.||-|||+|+.|-..+..+. ...+++++++ +.+...+.+. ..+ .++ .+..
T Consensus 11 ~~~~~~~~kkiri~iiG~G~~g~~h~~~~~--~~~~~~~vav~D~~~~~~~~~~~~~~~~~~~~~~~-~~~~-------- 79 (444)
T 2ixa_A 11 FNIFDFNPKKVRIAFIAVGLRGQTHVENMA--RRDDVEIVAFADPDPYMVGRAQEILKKNGKKPAKV-FGNG-------- 79 (444)
T ss_dssp --------CCEEEEEECCSHHHHHHHHHHH--TCTTEEEEEEECSCHHHHHHHHHHHHHTTCCCCEE-ECSS--------
T ss_pred HCCCCCCCCCCEEEEECCHHHHHHHHHHHH--CCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCC-CCCC--------
T ss_conf 416568999758999948199999999997--08994899997698889999999999828963000-2654--------
Q ss_pred CCHHHHHHHHHHHHHHHHHHHC--CCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHH
Q ss_conf 8838999999972999999726--99899998036766674078999999986498499995043000406788889999
Q gi|254781176|r 76 SHPEVGRAAAEECIDEITEMLD--KTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPFHFEGSRRMRVAESG 153 (502)
Q Consensus 76 ~~~~~g~~~a~~~~~~i~~~~~--~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf~~eg~~r~~~a~~~ 153 (502)
.+..+++|+ +.|+|+|+ |-...-.-++..|-+.|.-+ ++-+|+... ...|.+
T Consensus 80 -------------~~d~~~ll~~~~iD~V~I~------tp~~~H~~~~~~al~~g~~v--~~EKP~~~~----~~e~~~- 133 (444)
T 2ixa_A 80 -------------NDDYKNMLKDKNIDAVFVS------SPWEWHHEHGVAAMKAGKIV--GMEVSGAIT----LEECWD- 133 (444)
T ss_dssp -------------TTTHHHHTTCTTCCEEEEC------CCGGGHHHHHHHHHHTTCEE--EECCCCCSS----HHHHHH-
T ss_pred -------------CCCHHHHHCCCCCCEEEEC------CCCHHHHHHHHHHHHCCCEE--EECCCCCCC----HHHHHH-
T ss_conf -------------3669999638999889985------88276899999999719877--741889899----999999-
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 99999863335450278887413665318999744679999998
Q gi|254781176|r 154 IEALQETVDTLIVIPNQNLFRIANDKTTFADAFSMADQVLYSGV 197 (502)
Q Consensus 154 ~~~l~~~~d~~i~i~n~~l~~~~~~~~~~~~af~~~d~~l~~~v 197 (502)
|.++.+.....+.+ +...-+..+|..+-+.+.++.
T Consensus 134 l~~~~~~~~~~~~v---------~~~~r~~~~~~~~~~~i~~g~ 168 (444)
T 2ixa_A 134 YVKVSEQTGVPLMA---------LENVCYRRDVMAILNMVRKGM 168 (444)
T ss_dssp HHHHHHHHCCCEEE---------CCGGGGCHHHHHHHHHHHTTT
T ss_pred HHHHHHHHCCCCEE---------CCCCCCCHHHHHHHHHHHCCC
T ss_conf 99999983999601---------104445879999999998699
No 218
>1g8l_A Molybdopterin biosynthesis MOEA protein; molybdenum cofactor biosynthesis, metal binding protein; 1.95A {Escherichia coli} SCOP: b.85.6.1 b.103.1.1 c.57.1.2 PDB: 1fc5_A 1g8r_A 2nqu_A 2nro_A 2nqq_A 2nqk_A 2nqr_A 2nqm_A 2nqs_A 2nrp_A 2nqv_A 2nrs_A 2nqn_A
Probab=41.77 E-value=13 Score=14.82 Aligned_cols=19 Identities=16% Similarity=0.364 Sum_probs=8.1
Q ss_pred HHHHHCCCCEEEEEEEECC
Q ss_conf 7876415865899876148
Q gi|254781176|r 217 VRSVMRNMGRAMMGTGEAS 235 (502)
Q Consensus 217 ~~~v~~~~g~a~~g~g~~~ 235 (502)
+++.++..|.-..-.|...
T Consensus 209 l~a~l~~~G~~~~~~~~~~ 227 (411)
T 1g8l_A 209 VHLMLEQLGCEVINLGIIR 227 (411)
T ss_dssp HHHHHHHTTCEEEEEEEEC
T ss_pred HHHHHHHCCCEEEECCCCC
T ss_conf 9999997799899746426
No 219
>2qtl_A MSR;, methionine synthase reductase; alpha-beta-alpha structural motif, flattened antiparallel beta barrel, flexible hinge region; HET: FAD; 1.90A {Homo sapiens} PDB: 2qtz_A*
Probab=41.72 E-value=13 Score=14.82 Aligned_cols=27 Identities=11% Similarity=0.207 Sum_probs=17.9
Q ss_pred HHHHHHHHHCCCCCCCCHHHHHHHHCC
Q ss_conf 888887651665555898787876415
Q gi|254781176|r 197 VSCITDLMIKEGLINLDFADVRSVMRN 223 (502)
Q Consensus 197 v~~i~~~i~~~g~in~df~d~~~v~~~ 223 (502)
-+.+.|++..---+.+.+..+-.++.-
T Consensus 262 ~~t~ldvL~~fps~~~pl~~Ll~~lp~ 288 (539)
T 2qtl_A 262 CACLLDLLLAFPSCQPPLSLLLEHLPK 288 (539)
T ss_dssp TCCHHHHHHHSTTBCCCHHHHHHHSCB
T ss_pred CCCHHHHHHHCCCCCCCHHHHHHHCCC
T ss_conf 564999997687456789999974787
No 220
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=41.64 E-value=13 Score=14.81 Aligned_cols=94 Identities=18% Similarity=0.271 Sum_probs=56.3
Q ss_pred CEEEEEEECCCHHHHHHHHHHCCCCCCEEEE-ECCCHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 6179999668147999999985899844999-825578855189970485155425567888883899999997299999
Q gi|254781176|r 15 PRITVFGVGGGGGNAVNNMVSSGLQGVNFVV-ANTDAQALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAEECIDEIT 93 (502)
Q Consensus 15 ~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~-~ntd~~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~~~~i~ 93 (502)
-||-|||.|.-|-.-+..+ ....++++++ ++.+...+...... +|.. ...+.+.
T Consensus 3 lrvgiIG~G~~g~~h~~~~--~~~~~~~ivav~d~~~~~~~~~a~~----~~~~-------------------~~~~~~~ 57 (344)
T 3ezy_A 3 LRIGVIGLGRIGTIHAENL--KMIDDAILYAISDVREDRLREMKEK----LGVE-------------------KAYKDPH 57 (344)
T ss_dssp EEEEEECCSHHHHHHHHHG--GGSTTEEEEEEECSCHHHHHHHHHH----HTCS-------------------EEESSHH
T ss_pred CEEEEECCHHHHHHHHHHH--HHCCCCEEEEEECCCHHHHHHHHHH----CCCC-------------------CCCCCHH
T ss_conf 2499999719999999999--7289968999989899999999998----3998-------------------4029999
Q ss_pred HHHC--CCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCC
Q ss_conf 9726--99899998036766674078999999986498499995043000
Q gi|254781176|r 94 EMLD--KTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPFHF 141 (502)
Q Consensus 94 ~~~~--~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf~~ 141 (502)
++|+ +.|.|||+ |-+..-+-+++.|-+.|.-+ ++-+|+..
T Consensus 58 ell~~~~iD~V~I~------tp~~~H~~~~~~al~~gkhV--~~EKP~a~ 99 (344)
T 3ezy_A 58 ELIEDPNVDAVLVC------SSTNTHSELVIACAKAKKHV--FCEKPLSL 99 (344)
T ss_dssp HHHHCTTCCEEEEC------SCGGGHHHHHHHHHHTTCEE--EEESCSCS
T ss_pred HHHCCCCCCEEEEC------CCCHHHHHHHHHHHHCCCCE--EEECCCCC
T ss_conf 99649998999971------63114399999999769968--99457211
No 221
>1vma_A Cell division protein FTSY; TM0570, structural genomics, JCSG, protein structure initiative, PSI, joint center for structural genomics; HET: CIT; 1.60A {Thermotoga maritima} SCOP: a.24.13.1 c.37.1.10
Probab=41.26 E-value=13 Score=14.77 Aligned_cols=46 Identities=26% Similarity=0.292 Sum_probs=27.9
Q ss_pred CCCCCCCCHHHHHHHHHHH---CCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 6766674078999999986---4984999950430004067888899999999986333
Q gi|254781176|r 108 MGGGTGTGAAPIIAKIARN---KGVLTVGVVTKPFHFEGSRRMRVAESGIEALQETVDT 163 (502)
Q Consensus 108 ~gggtgtg~~p~ia~~a~~---~~~~~~~~v~~pf~~eg~~r~~~a~~~~~~l~~~~d~ 163 (502)
|=|-+|+|=+..+||+|+- .| ..|++|+.=- .| -.+.+.|+.+++-
T Consensus 109 ~vG~~G~GKTTT~aKLA~~~~~~~-~kv~lv~~Dt-----~R----~aA~eQL~~~a~~ 157 (306)
T 1vma_A 109 VVGVNGTGKTTSCGKLAKMFVDEG-KSVVLAAADT-----FR----AAAIEQLKIWGER 157 (306)
T ss_dssp EECCTTSSHHHHHHHHHHHHHHTT-CCEEEEEECT-----TC----HHHHHHHHHHHHH
T ss_pred EECCCCCCCCCHHHHHHHHHHHCC-CEEEEEECCC-----CC----HHHHHHHHHHHHC
T ss_conf 977888984315999999998579-8489984356-----67----7799999998851
No 222
>3jqq_A Ferredoxin NADP reductase; FAD, oxidoreductase; HET: FAD A2P; 2.20A {Plasmodium falciparum} PDB: 2ok8_A* 2ok7_A* 3jqr_A* 3jqp_A*
Probab=41.11 E-value=13 Score=14.98 Aligned_cols=21 Identities=38% Similarity=0.718 Sum_probs=14.1
Q ss_pred CCCEEEEEECCCCCCCCCHHHHHHHHH
Q ss_conf 998999980367666740789999999
Q gi|254781176|r 98 KTHMCFVTAGMGGGTGTGAAPIIAKIA 124 (502)
Q Consensus 98 ~~~~~~~~ag~gggtgtg~~p~ia~~a 124 (502)
+..+||| |+|||.||+.+=+-
T Consensus 170 ~~~ivlI------a~GtGIaP~~s~l~ 190 (316)
T 3jqq_A 170 NTNFIFI------ATGTGISPYISFLK 190 (316)
T ss_dssp TCCEEEE------EEGGGGHHHHHHHH
T ss_pred CCCEEEE------EECCCCCHHHHHHH
T ss_conf 7888999------92577365999999
No 223
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.65A {Pyrococcus horikoshii OT3} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X*
Probab=41.09 E-value=13 Score=14.75 Aligned_cols=41 Identities=17% Similarity=0.367 Sum_probs=29.5
Q ss_pred CCCCHHHC--CCE-EEEEEEC----CCHHHHHHHHHHCCCCCCEEEEECCC
Q ss_conf 57884543--861-7999966----81479999999858998449998255
Q gi|254781176|r 6 ANMDITEL--KPR-ITVFGVG----GGGGNAVNNMVSSGLQGVNFVVANTD 49 (502)
Q Consensus 6 ~~~~~~~~--~~~-i~v~g~g----g~g~n~~~~~~~~~~~~~~~~~~ntd 49 (502)
++-+++++ +|| |.|||.. -.|.-++.+|.+.|. ..+.+|..
T Consensus 11 sd~~l~~~L~~~ksIAVVGaS~~~~k~g~~v~~~L~~~g~---~V~pVnP~ 58 (144)
T 2d59_A 11 TDEDIREILTRYKKIALVGASPKPERDANIVMKYLLEHGY---DVYPVNPK 58 (144)
T ss_dssp CHHHHHHHHHHCCEEEEETCCSCTTSHHHHHHHHHHHTTC---EEEEECTT
T ss_pred CHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHCCC---EEEEECCC
T ss_conf 9999999987789499986369999729999999997799---79998987
No 224
>2xed_A Putative maleate isomerase; nicotinic acid catabolism, cofactor-independent CIS-trans isomerase; 1.95A {Nocardia farcinica} PDB: 2xec_A
Probab=40.69 E-value=14 Score=14.71 Aligned_cols=21 Identities=24% Similarity=0.339 Sum_probs=12.4
Q ss_pred HHHHHHHHCCCEEEEEEECCCC
Q ss_conf 9999998649849999504300
Q gi|254781176|r 119 IIAKIARNKGVLTVGVVTKPFH 140 (502)
Q Consensus 119 ~ia~~a~~~~~~~~~~v~~pf~ 140 (502)
-+.+..|.+|+=.|+++| |+.
T Consensus 136 Ai~~AL~~lgakrIallT-PY~ 156 (273)
T 2xed_A 136 ALVEGLRALDAQRVALVT-PYM 156 (273)
T ss_dssp HHHHHHHHTTCCEEEEEE-CSC
T ss_pred HHHHHHHHCCCCCEEEEC-CCC
T ss_conf 999999964998579974-797
No 225
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=40.63 E-value=14 Score=14.70 Aligned_cols=105 Identities=13% Similarity=0.173 Sum_probs=58.3
Q ss_pred EEEEEEECC-CHHHHHHHHHHCCCCCCEEEEECCC-HHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 179999668-1479999999858998449998255-78855189970485155425567888883899999997299999
Q gi|254781176|r 16 RITVFGVGG-GGGNAVNNMVSSGLQGVNFVVANTD-AQALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAEECIDEIT 93 (502)
Q Consensus 16 ~i~v~g~gg-~g~n~~~~~~~~~~~~~~~~~~ntd-~~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~~~~i~ 93 (502)
||.|.|-.| -|.+.++.+...|. +.++++.- ..++.......++.++ |. .+.+.+.
T Consensus 31 KILVTGatGfIGs~Lv~~L~~~g~---~Vi~~d~~~~~~~~~~~~~~~~~~~-----------Di--------~~~~~~~ 88 (379)
T 2c5a_A 31 KISITGAGGFIASHIARRLKHEGH---YVIASDWKKNEHMTEDMFCDEFHLV-----------DL--------RVMENCL 88 (379)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSCCSSSCGGGTCSEEEEC-----------CT--------TSHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCCCCCHHHHCCCCCEEEE-----------EC--------HHHHHHH
T ss_conf 799989998899999999997839---8999968985321342366747991-----------21--------4289999
Q ss_pred HHHCCCCEEEEEECCCCCCCC-------------CHHHHHHHHHHHCCCEEEEEEECCCCCC
Q ss_conf 972699899998036766674-------------0789999999864984999950430004
Q gi|254781176|r 94 EMLDKTHMCFVTAGMGGGTGT-------------GAAPIIAKIARNKGVLTVGVVTKPFHFE 142 (502)
Q Consensus 94 ~~~~~~~~~~~~ag~gggtgt-------------g~~p~ia~~a~~~~~~~~~~v~~pf~~e 142 (502)
..+.+.|.||-+|+....... ..+--+.+.+|..++-.+-+.+..-.+.
T Consensus 89 ~~~~~~D~VihlA~~~~~~~~~~~~~~~~~~~N~~gt~~lle~~~~~~~~~~i~~SS~~~~~ 150 (379)
T 2c5a_A 89 KVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYP 150 (379)
T ss_dssp HHHTTCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSC
T ss_pred HHHCCCCEEEECCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCC
T ss_conf 88618999999753201334210001001344226579999987752124377622433235
No 226
>2rc5_A Ferredoxin-NADP reductase; FAD, oxidoreductase; HET: FAD; 2.43A {Leptospira interrogans} PDB: 2rc6_A*
Probab=40.60 E-value=13 Score=14.80 Aligned_cols=19 Identities=42% Similarity=0.700 Sum_probs=13.2
Q ss_pred CCEEEEEECCCCCCCCCHHHHHHHH
Q ss_conf 9899998036766674078999999
Q gi|254781176|r 99 THMCFVTAGMGGGTGTGAAPIIAKI 123 (502)
Q Consensus 99 ~~~~~~~ag~gggtgtg~~p~ia~~ 123 (502)
.++||| ++|||.||+++=+
T Consensus 166 ~~lv~I------agGtGIaP~~s~l 184 (314)
T 2rc5_A 166 GDIMFL------ATGTGIAPFIGMS 184 (314)
T ss_dssp SCEEEE------EEGGGGHHHHHHH
T ss_pred CCEEEE------ECCEEHHHHHHHH
T ss_conf 858999------7872077899999
No 227
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics, NPPSFA; HET: NAD; 2.00A {Pyrococcus horikoshii OT3} SCOP: c.2.1.3 d.81.1.1
Probab=40.12 E-value=14 Score=14.64 Aligned_cols=107 Identities=13% Similarity=0.097 Sum_probs=59.7
Q ss_pred CCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECC---CHHH--HHHCCCCEEEEECCCCCCCCCCCCC-HHHHHHHHHH
Q ss_conf 86179999668147999999985899844999825---5788--5518997048515542556788888-3899999997
Q gi|254781176|r 14 KPRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANT---DAQA--LMMSKAKQIIQLGSGITEGLGAGSH-PEVGRAAAEE 87 (502)
Q Consensus 14 ~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~nt---d~~~--l~~~~~~~~~~~g~~~~~g~g~g~~-~~~g~~~a~~ 87 (502)
|.||-|.|.|--|-.++..+..+ ..++++++|- |..+ |..-..+.+. +.-. -...+..-.+
T Consensus 2 kikVgInG~GrIGr~v~r~l~~~--~d~evv~ind~~~~~~~~l~~~~~~~~~~-----------~~~~~i~~~k~~~~~ 68 (334)
T 2czc_A 2 KVKVGVNGYGTIGKRVAYAVTKQ--DDMELIGITKTKPDFEAYRAKELGIPVYA-----------ASEEFIPRFEKEGFE 68 (334)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTC--TTEEEEEEEESSCSHHHHHHHHTTCCEEE-----------SSGGGHHHHHHHTCC
T ss_pred CEEEEEECCCHHHHHHHHHHHHC--CCCEEEEEECCCHHHHHHHHHCCCEEEEE-----------CCCEEEEEEEEEEEC
T ss_conf 73799989847899999999609--99689999679849999997528267995-----------587289841360230
Q ss_pred HHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCC
Q ss_conf 29999997269989999803676667407899999998649849999504300
Q gi|254781176|r 88 CIDEITEMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPFH 140 (502)
Q Consensus 88 ~~~~i~~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf~ 140 (502)
....+...+.+.|+||-++|.| ....-++...+.|+-.| +.+-|+.
T Consensus 69 ~~~~i~~~~~~vDvVIdcTg~~------~~~~~~~~~~~~g~k~V-~~s~~~~ 114 (334)
T 2czc_A 69 VAGTLNDLLEKVDIIVDATPGG------IGAKNKPLYEKAGVKAI-FQGGEKA 114 (334)
T ss_dssp CSCBHHHHHTTCSEEEECCSTT------HHHHHHHHHHHHTCEEE-ECTTSCG
T ss_pred CCCCCCCHHCCCCEEEECCCCC------CCHHHHHHHHHCCCEEE-EECCCCC
T ss_conf 7654752122899999857886------88888788986798699-9557755
No 228
>1uwk_A Urocanate hydratase; hydrolase, urocanase, imidazolonepropionate, histidine metabolism, lyase; HET: NAD URO; 1.19A {Pseudomonas putida} SCOP: e.51.1.1 PDB: 1w1u_A* 1uwl_A* 2v7g_A*
Probab=39.86 E-value=14 Score=14.62 Aligned_cols=153 Identities=18% Similarity=0.321 Sum_probs=78.1
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHH-----HHHHHHHHCC--CCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEEC
Q ss_conf 554255678888838999999972-----9999997269--989999803676667407899999998649849999504
Q gi|254781176|r 65 GSGITEGLGAGSHPEVGRAAAEEC-----IDEITEMLDK--THMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTK 137 (502)
Q Consensus 65 g~~~~~g~g~g~~~~~g~~~a~~~-----~~~i~~~~~~--~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~ 137 (502)
|-.-...+-||+=--||-+-..+. ...-++.+.+ ...+|+||||||=- ||-|--+.+ .|...+++=.-
T Consensus 125 Gl~mYGQMTAGsw~YIG~QGIvqGTyeT~~~aark~~g~~L~Gk~~lTaGLGGMg--GAQplA~~m---ag~v~i~~Evd 199 (557)
T 1uwk_A 125 GLAMYGQMTAGSWIYIGSQGIVQGTYETFVEAGRQHYGGSLKGKWVLTAGLGGMG--GAQPLAATL---AGACSLNIESQ 199 (557)
T ss_dssp TCCCBCTTTTTTTCCCTTHHHHHHHHHHHHHHHHHHTSSCCTTCEEEEECCSTTT--THHHHHHHH---TTCEEEEEESC
T ss_pred CCCEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCC--CCCCCCEEE---CCCEEEEEECC
T ss_conf 8733346442003478276102049999999999862888677378832667655--566400022---47239999539
Q ss_pred CCCCCCHHHHHH---------HHHHHHHHHHHHHH------------HHHHH------------------HHHHHHHCCC
Q ss_conf 300040678888---------99999999986333------------54502------------------7888741366
Q gi|254781176|r 138 PFHFEGSRRMRV---------AESGIEALQETVDT------------LIVIP------------------NQNLFRIAND 178 (502)
Q Consensus 138 pf~~eg~~r~~~---------a~~~~~~l~~~~d~------------~i~i~------------------n~~l~~~~~~ 178 (502)
|-..+ +|.++ -++.|..+++.... +=++| -|-|.-.+..
T Consensus 200 ~~ri~--kR~~qgylD~~~~~ldeai~~~~~A~~~k~~lSIgl~GNaadv~e~l~~r~i~pDlvTDQTSaHdPl~GY~P~ 277 (557)
T 1uwk_A 200 QSRID--FRLETRYVDEQATDLDDALVRIAKYTAEGKAISIALHGNAAEILPELVKRGVRPDMVTDQTSAHDPLNGYLPA 277 (557)
T ss_dssp HHHHH--HHHHTTSCCEECSSHHHHHHHHHHHHHTTCCCEEEEESCHHHHHHHHHHHTCCCSEECCCSCTTCTTTSCCCT
T ss_pred HHHHH--HHHHCCCCEEEECCHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99999--9987588206817999999999999755984389984559999999997599864246656445865576789
Q ss_pred CCHHHHHHH-----------HHHHHHHHHHHHHHHHHHCCCCCCCCHH-HHHHHHCCCC
Q ss_conf 531899974-----------4679999998888876516655558987-8787641586
Q gi|254781176|r 179 KTTFADAFS-----------MADQVLYSGVSCITDLMIKEGLINLDFA-DVRSVMRNMG 225 (502)
Q Consensus 179 ~~~~~~af~-----------~~d~~l~~~v~~i~~~i~~~g~in~df~-d~~~v~~~~g 225 (502)
.++|.+|-. .+.+-|..-|+.|-++- ..|.+=.|+- -++..-+..|
T Consensus 278 G~s~eEa~~lr~~dP~~f~~~v~~Sm~rHv~Am~~l~-~~G~~~FDYGNn~r~~A~~aG 335 (557)
T 1uwk_A 278 GWTWEQYRDRAQTEPAAVVKAAKQSMAVHVQAMLDFQ-KQGVPTFDYGNNIRQMAKEEG 335 (557)
T ss_dssp TCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH-HTTCCBCBCSSCHHHHHHHTT
T ss_pred CCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH-HCCCEEEECCHHHHHHHHHCC
T ss_conf 8899999998764989999999999999999999999-869747645578999998579
No 229
>1jbq_A Cystathionine beta-synthase, serine sulfhydrase; fold type II of PLP enzymes, lyase; HET: HEM PLP; 2.60A {Homo sapiens} SCOP: c.79.1.1 PDB: 1m54_A*
Probab=39.46 E-value=14 Score=14.62 Aligned_cols=53 Identities=21% Similarity=0.389 Sum_probs=26.5
Q ss_pred EEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99803676667407899999998649849999504300040678888999999999863335450278
Q gi|254781176|r 103 FVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPFHFEGSRRMRVAESGIEALQETVDTLIVIPNQ 170 (502)
Q Consensus 103 ~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf~~eg~~r~~~a~~~~~~l~~~~d~~i~i~n~ 170 (502)
+|+|. .|-+|-+ +|-+|+.+|+-.+.| +|-...-.+ +..|+.+--.+|.++.+
T Consensus 164 VieaS-SGN~G~A----lA~~Aa~~G~~~~Iv--mP~~~s~~K--------~~~lr~~GA~Vi~~~~~ 216 (435)
T 1jbq_A 164 IIEPT-SGNTGIG----LALAAAVRGYRCIIV--MPEKMSSEK--------VDVLRALGAEIVRTPTN 216 (435)
T ss_dssp EEEEC-SSHHHHH----HHHHHHHHTCEEEEE--ECSCCCHHH--------HHHHHHTTCEEEECCC-
T ss_pred EEEEC-CCHHHHH----HHHHHHHHCCCEEEE--ECCCCCHHH--------HHHHHHCCCEEEEECCC
T ss_conf 99979-5799999----999999829957999--568762888--------99998449779991676
No 230
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=39.25 E-value=14 Score=14.55 Aligned_cols=95 Identities=14% Similarity=0.153 Sum_probs=55.1
Q ss_pred CCEEEEEEECCCHHHH-HHHHHHCCCCCCEEEE-ECCCHHHHHHCC----CC-EEEEECCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 8617999966814799-9999985899844999-825578855189----97-048515542556788888389999999
Q gi|254781176|r 14 KPRITVFGVGGGGGNA-VNNMVSSGLQGVNFVV-ANTDAQALMMSK----AK-QIIQLGSGITEGLGAGSHPEVGRAAAE 86 (502)
Q Consensus 14 ~~~i~v~g~gg~g~n~-~~~~~~~~~~~~~~~~-~ntd~~~l~~~~----~~-~~~~~g~~~~~g~g~g~~~~~g~~~a~ 86 (502)
+.||-|||+|+-|.+. ++.+ ....++++++ |+.|...+.... .+ .++..
T Consensus 83 ~i~v~iiG~G~~g~~~~~~~~--~~~~~~~lvav~d~~~~~a~~~~~~~~~~~~~~~~---------------------- 138 (433)
T 1h6d_A 83 RFGYAIVGLGKYALNQILPGF--AGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYD---------------------- 138 (433)
T ss_dssp CEEEEEECCSHHHHHTHHHHT--TTCSSEEEEEEECSCHHHHHHHHHHTTCCGGGEEC----------------------
T ss_pred CEEEEEEECHHHHHHHHHHHH--HHCCCCEEEEEEECCHHHHHHHHHHHCCCCCCCCC----------------------
T ss_conf 068999908199999999999--72999789999929999999999971998344667----------------------
Q ss_pred HHHHHHHHHHC--CCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCC
Q ss_conf 72999999726--998999980367666740789999999864984999950430004
Q gi|254781176|r 87 ECIDEITEMLD--KTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPFHFE 142 (502)
Q Consensus 87 ~~~~~i~~~~~--~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf~~e 142 (502)
.+.++++|+ +.|.|+|+ |-...-+-++..|-+.|.-+ ++-+|+..-
T Consensus 139 --~~~~~~ll~~~~iD~V~i~------tp~~~H~~~~~~al~aGkhv--~~EKP~a~~ 186 (433)
T 1h6d_A 139 --YSNFDKIAKDPKIDAVYII------LPNSLHAEFAIRAFKAGKHV--MCEKPMATS 186 (433)
T ss_dssp --SSSGGGGGGCTTCCEEEEC------SCGGGHHHHHHHHHHTTCEE--EECSSCCSS
T ss_pred --CCCHHHHHCCCCCCEEEEE------CCHHHHHHHHHHHHHCCCEE--EEECCCCCC
T ss_conf --6899999569998789990------98799999999999879919--995784123
No 231
>3hh1_A Tetrapyrrole methylase family protein; chlorobium tepidum, structural genomics, PSI-2, protein structure initiative; 1.85A {Chlorobaculum tepidum}
Probab=39.18 E-value=14 Score=14.54 Aligned_cols=105 Identities=16% Similarity=0.149 Sum_probs=57.7
Q ss_pred CCEEEEEEECCCHHHHH-HHHHHCCCCCCEEEEECCC---HHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 86179999668147999-9999858998449998255---7885518997048515542556788888389999999729
Q gi|254781176|r 14 KPRITVFGVGGGGGNAV-NNMVSSGLQGVNFVVANTD---AQALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAEECI 89 (502)
Q Consensus 14 ~~~i~v~g~gg~g~n~~-~~~~~~~~~~~~~~~~ntd---~~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~~ 89 (502)
+-++.+||+|=+--.-+ .|.+ .-++.++++++..- ...|.+...+.+.++...-+ .-++..
T Consensus 5 ~G~LylI~~piGn~~dit~ra~-~~l~~~d~i~~E~~r~~~~~l~~~~i~~~~~~~~~~~--------------~~~~~~ 69 (117)
T 3hh1_A 5 KGTLYVVATPLGNLDDMTFRAV-NTLRNAGAIACEDTRRTSILLKHFGIEGKRLVSYHSF--------------NEERAV 69 (117)
T ss_dssp CCCEEEEEECSSCGGGSCHHHH-HHHHHCSEEEESCHHHHHHHHHHTTCCSCCEEECCST--------------THHHHH
T ss_pred CCEEEEECCCCCCHHHHCHHHH-HHHHHCCEEEECCCHHHHHHHHHHCCCCCEEEECCCC--------------HHHHHH
T ss_conf 8589998168988002079999-9998699999827401588998737667538861565--------------168889
Q ss_pred HHH-HHHHCCCCEEEEE-ECCCCCCCCCHHHHHHHHHHHCCCEEEEEE
Q ss_conf 999-9972699899998-036766674078999999986498499995
Q gi|254781176|r 90 DEI-TEMLDKTHMCFVT-AGMGGGTGTGAAPIIAKIARNKGVLTVGVV 135 (502)
Q Consensus 90 ~~i-~~~~~~~~~~~~~-ag~gggtgtg~~p~ia~~a~~~~~~~~~~v 135 (502)
.++ ..+.+|-++++++ ||+=+=-+.|+- +.+.|++.|+-++.++
T Consensus 70 ~~~~~~l~~g~~v~lvSdaG~P~IaDPG~~--lv~~a~~~gi~V~~ip 115 (117)
T 3hh1_A 70 RQVIELLEEGSDVALVTDAGTPAISDPGYT--MASAAHAAGLPVVPVP 115 (117)
T ss_dssp HHHHHHHHTTCCEEEEEETTSCGGGSTTHH--HHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHCCCCEEEEECCCCCEEECCHHH--HHHHHHHCCCCEEECC
T ss_conf 999999984996999955899637676999--9999998699589569
No 232
>2a6a_A Hypothetical protein TM0874; glycoprotein endopeptidase, structural genomics, joint center for structural genomics, JCSG; 2.50A {Thermotoga maritima MSB8} SCOP: c.55.1.9 c.55.1.9
Probab=39.09 E-value=14 Score=14.53 Aligned_cols=97 Identities=14% Similarity=0.145 Sum_probs=55.8
Q ss_pred HHHHHHHHHHCCCCCCEEEEECCCHHHHHHCCC-CEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH-------C
Q ss_conf 479999999858998449998255788551899-70485155425567888883899999997299999972-------6
Q gi|254781176|r 26 GGNAVNNMVSSGLQGVNFVVANTDAQALMMSKA-KQIIQLGSGITEGLGAGSHPEVGRAAAEECIDEITEML-------D 97 (502)
Q Consensus 26 g~n~~~~~~~~~~~~~~~~~~ntd~~~l~~~~~-~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~~~~i~~~~-------~ 97 (502)
|.|.+.+-+ .-...++++|= +.+.-+-. ..++ +....+. +|..++.=...|.++| +
T Consensus 2 ~~~~~~~~~----~~M~iLaiDTS-~~~sval~~~~~i-~~~~~~~----------~r~hse~L~~~i~~~L~~~~l~~~ 65 (218)
T 2a6a_A 2 GSDKIHHHH----HHMNVLALDTS-QRIRIGLRKGEDL-FEISYTG----------EKKHAEILPVVVKKLLDELDLKVK 65 (218)
T ss_dssp ---------------CEEEEEECS-SSEEEEEEETTEE-EEEEEES----------CGGGGGHHHHHHHHHHHHHTCCGG
T ss_pred CCCCCCCCC----CCCEEEEEECC-CCCEEEEEECCEE-EEEEECC----------CHHHHHHHHHHHHHHHHHCCCCHH
T ss_conf 976255456----54607779827-7647999989999-9998326----------668999999999999998599978
Q ss_pred CCCEEEEEECCCCCCCCCHHHHHHH-HHHHCCCEEEEEEECC
Q ss_conf 9989999803676667407899999-9986498499995043
Q gi|254781176|r 98 KTHMCFVTAGMGGGTGTGAAPIIAK-IARNKGVLTVGVVTKP 138 (502)
Q Consensus 98 ~~~~~~~~ag~gggtgtg~~p~ia~-~a~~~~~~~~~~v~~p 138 (502)
+-|.++++.|=|+-||.-.+-.+|+ +|..+++-.++|=|+-
T Consensus 66 did~i~v~~GPGsFTGlRIg~a~akgla~~~~ipl~~vssl~ 107 (218)
T 2a6a_A 66 DLDVVGVGIGPGGLTGLRVGIATVVGLVSPYDIPVAPLNSFE 107 (218)
T ss_dssp GCSEEEEECCSSCHHHHHHHHHHHHHHHGGGTCCEEEECHHH
T ss_pred HCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
T ss_conf 863899956898088898999999999986499855457799
No 233
>2bwj_A Adenylate kinase 5; phosphoryl transfer reaction, transferase; HET: AMP; 2.3A {Homo sapiens}
Probab=38.71 E-value=15 Score=14.49 Aligned_cols=35 Identities=26% Similarity=0.502 Sum_probs=23.2
Q ss_pred HHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEE
Q ss_conf 726998999980367666740789999999864984999
Q gi|254781176|r 95 MLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVG 133 (502)
Q Consensus 95 ~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~ 133 (502)
-++.+.++||. |+.|+|=+.+..++|+.+|...|.
T Consensus 8 ~~~k~kiI~l~----G~pGSGKsT~a~~La~~~~~~~is 42 (199)
T 2bwj_A 8 DLRKCKIIFII----GGPGSGKGTQCEKLVEKYGFTHLS 42 (199)
T ss_dssp HHHHSCEEEEE----ECTTSSHHHHHHHHHHHHTCEEEE
T ss_pred HCCCCCEEEEE----CCCCCCHHHHHHHHHHHHCCEEEE
T ss_conf 65478689998----999999899999999986990683
No 234
>3dtt_A NADP oxidoreductase; YP_830112.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=38.44 E-value=13 Score=14.79 Aligned_cols=39 Identities=23% Similarity=0.418 Sum_probs=30.1
Q ss_pred CCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHH
Q ss_conf 861799996681479999999858998449998255788551
Q gi|254781176|r 14 KPRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDAQALMM 55 (502)
Q Consensus 14 ~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~~~l~~ 55 (502)
.=||.|||.|--|...-.++.+.|.+ |. ..|.+......
T Consensus 19 ~MkIaVIG~G~mG~~lA~~La~aGh~-V~--v~~r~~~~~~~ 57 (245)
T 3dtt_A 19 GMKIAVLGTGTVGRTMAGALADLGHE-VT--IGTRDPKATLA 57 (245)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCE-EE--EEESCHHHHHT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCE-EE--EECCCHHHHHH
T ss_conf 99899999679999999999987997-99--98399999999
No 235
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, gluconate utilization, pentose shunt; HET: GLO; 1.50A {Escherichia coli k-12} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=38.34 E-value=15 Score=14.45 Aligned_cols=181 Identities=18% Similarity=0.181 Sum_probs=84.0
Q ss_pred CCCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCHHHHH----------------------HCCCCEEEEECCCCCC
Q ss_conf 386179999668147999999985899844999825578855----------------------1899704851554255
Q gi|254781176|r 13 LKPRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDAQALM----------------------MSKAKQIIQLGSGITE 70 (502)
Q Consensus 13 ~~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~~~l~----------------------~~~~~~~~~~g~~~~~ 70 (502)
-|.||-+||+|-.|.+...+|.+.|.. ..+.|-+..... .+..+..|.+=..
T Consensus 14 ~K~kIG~IGLG~MG~~mA~nL~~~G~~---V~v~dr~~~k~~~l~~~~~~~~~~~~~s~~e~v~~~~~~~~Ii~~v~--- 87 (480)
T 2zyd_A 14 SKQQIGVVGMAVMGRNLALNIESRGYT---VSIFNRSREKTEEVIAENPGKKLVPYYTVKEFVESLETPRRILLMVK--- 87 (480)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHTTTCC---EEEECSSHHHHHHHHHHSTTSCEEECSSHHHHHHTBCSSCEEEECSC---
T ss_pred CCCEEEEEEEHHHHHHHHHHHHHCCCC---EEEEECCHHHHHHHHHHCCCCCCCHHCCHHHHHHHCCCCCEEEEECC---
T ss_conf 788699983079899999999977992---69982999999999983898767512329999983799998999799---
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHH
Q ss_conf 67888883899999997299999972699899998036766674078999999986498499995043000406788889
Q gi|254781176|r 71 GLGAGSHPEVGRAAAEECIDEITEMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPFHFEGSRRMRVA 150 (502)
Q Consensus 71 g~g~g~~~~~g~~~a~~~~~~i~~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf~~eg~~r~~~a 150 (502)
+|. +..+-.+.+...|+..++++- ++-+.-..+--+++.+++.|+. ++-.|-+ |.. ..|
T Consensus 88 ---~~~-------~v~~vi~~l~~~l~~g~iiID----~sT~~~~~t~~~~~~l~~~gi~---flDapVS--GG~--~gA 146 (480)
T 2zyd_A 88 ---AGA-------GTDAAIDSLKPYLDKGDIIID----GGNTFFQDTIRRNRELSAEGFN---FIGTGVS--GGE--EGA 146 (480)
T ss_dssp ---SSS-------HHHHHHHHHGGGCCTTCEEEE----CSCCCHHHHHHHHHHHHHTTCE---EEEEEEE--SHH--HHH
T ss_pred ---CCH-------HHHHHHHHHHHCCCCCCEEEE----CCCCCHHHHHHHHHHHHHCCCC---EECCCCC--CCH--HHH
T ss_conf ---975-------799999999841889978982----5875157999999999975996---3156256--677--788
Q ss_pred HHH-----------HHHHHHHHHHHHHHH--HHHHHHHCCCCCHHHHHHHHHHHHHHHH-HHHHHHHHHCC----CCCCC
Q ss_conf 999-----------999998633354502--7888741366531899974467999999-88888765166----55558
Q gi|254781176|r 151 ESG-----------IEALQETVDTLIVIP--NQNLFRIANDKTTFADAFSMADQVLYSG-VSCITDLMIKE----GLINL 212 (502)
Q Consensus 151 ~~~-----------~~~l~~~~d~~i~i~--n~~l~~~~~~~~~~~~af~~~d~~l~~~-v~~i~~~i~~~----g~in~ 212 (502)
..| .++++...+++=..- ..+-.-..++ .+--...+++++.+..+ +.+++|.+.-- ++-+.
T Consensus 147 ~~G~~iMvGG~~e~~~~v~pil~~~a~~~~~~~~~v~~~G~-~GaG~~vKlv~N~i~~~~m~~laEa~~lak~~~~~~~~ 225 (480)
T 2zyd_A 147 LKGPSIMPGGQKEAYELVAPILTKIAAVAEDGEPCVTYIGA-DGAGHYVKMVHNGIEYGDMQLIAEAYSLLKGGLNLTNE 225 (480)
T ss_dssp HHCCEEEEESCHHHHHHHHHHHHHHSCBCTTSCBSBCCCBS-TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
T ss_pred HCCCCEEECCHHHHHHHHHHHHHHCCCHHHCCCCCEEEECC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
T ss_conf 63985242256999999999997515122136642353089-52999999999999999999999999999850368889
Q ss_pred CHHHHHHHH
Q ss_conf 987878764
Q gi|254781176|r 213 DFADVRSVM 221 (502)
Q Consensus 213 df~d~~~v~ 221 (502)
|.+++-...
T Consensus 226 ~i~~v~~~~ 234 (480)
T 2zyd_A 226 ELAQTFTEW 234 (480)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
T ss_conf 999999985
No 236
>2jg5_A Fructose 1-phosphate kinase; 1-phosphofructokinase, transferase; 2.3A {Staphylococcus aureus}
Probab=38.18 E-value=15 Score=14.44 Aligned_cols=163 Identities=17% Similarity=0.117 Sum_probs=86.4
Q ss_pred EEEEEECCCHHHHHHHHHHCCCCCCEEEEECCC------HHHHHHCCCCEEEE-ECC-----------CCCCCCCCCCCH
Q ss_conf 799996681479999999858998449998255------78855189970485-155-----------425567888883
Q gi|254781176|r 17 ITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTD------AQALMMSKAKQIIQ-LGS-----------GITEGLGAGSHP 78 (502)
Q Consensus 17 i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd------~~~l~~~~~~~~~~-~g~-----------~~~~g~g~g~~~ 78 (502)
=...-.||+|.|+.-.|...|.+ +.|+..=-| .+.|....++.... ... ..|.-...+ |
T Consensus 30 ~~~~~~GG~~~NvA~~l~~LG~~-~~~i~~vG~d~~~~i~~~L~~~gI~~~~i~~~~~t~~~~~~~~~~~~~~~~~~--~ 106 (306)
T 2jg5_A 30 ATYKFAGGKGINVSRVLKTLDVE-STALGFAGGFPGKFIIDTLNNSAIQSNFIEVDEDTRINVKLKTGQETEINAPG--P 106 (306)
T ss_dssp EEEEEEESHHHHHHHHHHHTTCC-CEEEEEECHHHHHHHHHHHHHTTCEECCEECSSCCEEEEEEESSSEEEEECCC--C
T ss_pred EEEECCCCHHHHHHHHHHHCCCC-EEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCEEEEEECC--C
T ss_conf 15763797799999999987998-79999944954999999997638874223004787269997279868997047--6
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 89999999729999997269989999803676667407899999998649849999504300040678888999999999
Q gi|254781176|r 79 EVGRAAAEECIDEITEMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPFHFEGSRRMRVAESGIEALQ 158 (502)
Q Consensus 79 ~~g~~~a~~~~~~i~~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf~~eg~~r~~~a~~~~~~l~ 158 (502)
++....-......+ +.+...+.+++..-+-++.....+..+++.++..++.++.... + ..+..+.
T Consensus 107 ~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~------~--------~~l~~~l 171 (306)
T 2jg5_A 107 HITSTQFEQLLQQI-KNTTSEDIVIVAGSVPSSIPSDAYAQIAQITAQTGAKLVVDAE------K--------ELAESVL 171 (306)
T ss_dssp CCCHHHHHHHHHHH-TTCCTTCEEEEESCCCTTSCTTHHHHHHHHHHHHCCEEEEECC------H--------HHHHHHG
T ss_pred CCCHHHHHHHHHHH-HHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEECCCH------H--------HHHHHHH
T ss_conf 68988999999999-8611376899933434668799999999999862980411631------5--------6676664
Q ss_pred HHHHHHHHHHHHHHHHHCCCCC-HHHHHHHHHHHHHHHHH
Q ss_conf 8633354502788874136653-18999744679999998
Q gi|254781176|r 159 ETVDTLIVIPNQNLFRIANDKT-TFADAFSMADQVLYSGV 197 (502)
Q Consensus 159 ~~~d~~i~i~n~~l~~~~~~~~-~~~~af~~~d~~l~~~v 197 (502)
++.+.++......+..+.+... +..+....+..++..++
T Consensus 172 ~~~~~~~~~~~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~ 211 (306)
T 2jg5_A 172 PYHPLFIKPNKDELEVMFNTTVNSDADVIKYGRLLVDKGA 211 (306)
T ss_dssp GGCCSEECCBHHHHHHHTTSCCCSHHHHHHHHHHHHHTTC
T ss_pred CCCCEEEECCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC
T ss_conf 2575245254899999753112215899999998886156
No 237
>1tzy_D Histone H4-VI; histone-fold, tetramer-dimer-dimer, DNA binding protein; 1.90A {Gallus gallus} SCOP: a.22.1.1 PDB: 1f66_B 1eqz_D 1hq3_D 1u35_B 2aro_D 2cv5_B* 2f8n_B 3afa_B 3a6n_B 2hio_D 1kx5_B* 1kx4_B* 1kx3_B* 1m18_B 1m19_B 1m1a_B 1p34_B 1p3a_B 1p3k_B 1p3l_B ...
Probab=38.04 E-value=15 Score=14.42 Aligned_cols=44 Identities=16% Similarity=0.165 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEEEEE
Q ss_conf 67999999888887651665555898787876415865899876
Q gi|254781176|r 189 ADQVLYSGVSCITDLMIKEGLINLDFADVRSVMRNMGRAMMGTG 232 (502)
Q Consensus 189 ~d~~l~~~v~~i~~~i~~~g~in~df~d~~~v~~~~g~a~~g~g 232 (502)
....|.+.++-.+.....-+--.|.-.||..+|+..|..++|+|
T Consensus 59 le~~l~~I~~dav~~~~hakRKTvt~~DV~~alkR~g~plyGfg 102 (103)
T 1tzy_D 59 LKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFG 102 (103)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHHHTTCEEESCC
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCC
T ss_conf 99999999999999988608872769999999995798788889
No 238
>2b5o_A FNR, ferredoxin--NADP reductase; complex with FAD, oxidoreductase; HET: FAD; 2.50A {Synechococcus SP}
Probab=37.94 E-value=13 Score=14.80 Aligned_cols=41 Identities=20% Similarity=0.075 Sum_probs=22.3
Q ss_pred HHHHHHHHHHCCCCC-CEEEEEEECC---CCCCEEEEEEEEECCC
Q ss_conf 999999997416886-3999853134---6575479999851355
Q gi|254781176|r 280 DEAATRIREEVDSEA-NIILGATFDE---ALEGVIRVSVVATGIE 320 (502)
Q Consensus 280 ~~~~~~i~~~~~~~a-~ii~G~~~d~---~~~~~~~v~~iatg~d 320 (502)
..+.+++.+....+. -.++|-.-.. .....-.+..||+|..
T Consensus 217 G~~S~~L~~~~~~g~~v~i~gP~G~f~~~p~d~~~piImIa~GtG 261 (402)
T 2b5o_A 217 GVCSTYLCNLPVGTDDVKITGPVGKEMLLPDDEDATVVMLATGTG 261 (402)
T ss_dssp CHHHHHHHTCCTTCCCEEEEEEECSTTCCCSCTTCEEEEEEEGGG
T ss_pred CEECCHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEECCEE
T ss_conf 753866761988985999980356777776568987799985720
No 239
>2hig_A 6-phospho-1-fructokinase; transferase; 2.40A {Trypanosoma brucei} PDB: 3f5m_A*
Probab=37.89 E-value=9 Score=16.02 Aligned_cols=133 Identities=17% Similarity=0.275 Sum_probs=67.5
Q ss_pred HHHHHHHHHHC--CCCEEEEEECCCCCCCC-CHHHHHHHHHHHC--CCEEEEEEEC----------CCCCCCHHHHHHHH
Q ss_conf 72999999726--99899998036766674-0789999999864--9849999504----------30004067888899
Q gi|254781176|r 87 ECIDEITEMLD--KTHMCFVTAGMGGGTGT-GAAPIIAKIARNK--GVLTVGVVTK----------PFHFEGSRRMRVAE 151 (502)
Q Consensus 87 ~~~~~i~~~~~--~~~~~~~~ag~gggtgt-g~~p~ia~~a~~~--~~~~~~~v~~----------pf~~eg~~r~~~a~ 151 (502)
+..+++.+.|+ +-|.+|++ ||-|| -.|-.+++.+++. ++-+|+|--+ -|-|. --.+.+.
T Consensus 176 e~~~~i~~~L~~~~Id~LivI----GGdgS~~~A~~Lae~~~~~~~~i~VIGIPKTIDNDl~gtD~TiGFd--TAv~~~~ 249 (487)
T 2hig_A 176 QDPKEMVDTLERLGVNILFTV----GGDGTQRGALVISQEAKRRGVDISVFGVPKTIDNDLSFSHRTFGFQ--TAVEKAV 249 (487)
T ss_dssp CCHHHHHHHHHHHTCSEEEEE----ECHHHHHHHHHHHHHHHHHTCCCEEEEEECCTTSSCCCSSCCTTHH--HHHHHHH
T ss_pred CCHHHHHHHHHHHCCCEEEEE----CCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCHH--HHHHHHH
T ss_conf 569999999998499879995----6747899999999998862898329984025568877602356355--7999999
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHCCCCCHHHHHHHHHHHHHHHHH-HHHHHHHHCCCCCCCC----HHHHHHHHCCCC
Q ss_conf 9999999863335450278-887413665318999744679999998-8888765166555589----878787641586
Q gi|254781176|r 152 SGIEALQETVDTLIVIPNQ-NLFRIANDKTTFADAFSMADQVLYSGV-SCITDLMIKEGLINLD----FADVRSVMRNMG 225 (502)
Q Consensus 152 ~~~~~l~~~~d~~i~i~n~-~l~~~~~~~~~~~~af~~~d~~l~~~v-~~i~~~i~~~g~in~d----f~d~~~v~~~~g 225 (502)
+.+.+|...+-+. ++- -+.++.+...+|.-+.. ++ .+-++++..|=. ..| +.+++..+...+
T Consensus 250 ~ai~~l~~dA~S~---~r~v~iVEvMGR~aG~LAl~a--------alA~g~ad~ilIPE~-~~~~~~i~~~i~~~~~~~~ 317 (487)
T 2hig_A 250 QAIRAAYAEAVSA---NYGVGVVKLMGRDSGFIAAQA--------AVASAQANICLVPEN-PISEQEVMSLLERRFCHSR 317 (487)
T ss_dssp HHHHHHHHHHHTS---TTEEEEEEECCSSCCHHHHHH--------HHHHTCCSEEECTTS-CCCHHHHHHHHHHHTTSCS
T ss_pred HHHHHHHHHHHHC---CCCCEEEEECCCCCCHHHHHH--------HHHHCCCCEEECCCC-CCCHHHHHHHHHHHHHCCC
T ss_conf 9999998875533---566079996687654899999--------986288738977888-8999999999999872379
Q ss_pred EEEEEEEECCCC
Q ss_conf 589987614862
Q gi|254781176|r 226 RAMMGTGEASGH 237 (502)
Q Consensus 226 ~a~~g~g~~~g~ 237 (502)
.+++-+.|+-++
T Consensus 318 ~~vIVVaEG~~~ 329 (487)
T 2hig_A 318 SCVIIVAEGFGQ 329 (487)
T ss_dssp EEEEEEETTTTG
T ss_pred CCEEEEECCCCC
T ss_conf 754997045224
No 240
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=37.89 E-value=15 Score=14.40 Aligned_cols=12 Identities=8% Similarity=0.338 Sum_probs=6.6
Q ss_pred HHHHCCCCEEEE
Q ss_conf 997269989999
Q gi|254781176|r 93 TEMLDKTHMCFV 104 (502)
Q Consensus 93 ~~~~~~~~~~~~ 104 (502)
.+.+..+|+++-
T Consensus 62 ~e~~~~adiI~~ 73 (384)
T 1l7d_A 62 AQALSQADVVWK 73 (384)
T ss_dssp HHHHSSCSEEEE
T ss_pred HHHHHCCCEEEE
T ss_conf 898413989999
No 241
>1x87_A Urocanase protein; structural genomics, protein structure initiative, MCSG, PSI, midwest center for structural genomics; HET: MSE NAD; 2.40A {Geobacillus stearothermophilus} SCOP: e.51.1.1
Probab=37.77 E-value=15 Score=14.39 Aligned_cols=71 Identities=20% Similarity=0.318 Sum_probs=42.9
Q ss_pred CCCCCCCCCCCHHHHHHHHHHH-----HHHHHHHHCC--CCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCC
Q ss_conf 4255678888838999999972-----9999997269--98999980367666740789999999864984999950430
Q gi|254781176|r 67 GITEGLGAGSHPEVGRAAAEEC-----IDEITEMLDK--THMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPF 139 (502)
Q Consensus 67 ~~~~g~g~g~~~~~g~~~a~~~-----~~~i~~~~~~--~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf 139 (502)
.-...+-||+=--||-+-..+. ...=++.+.+ +..+|+||||||=- ||-|--+.+ .|...+++=.-|-
T Consensus 122 ~mYGQMTAGsw~YIG~QGIvqGTyeT~~~aark~~g~~L~Gk~~vTaGLGGMg--GAQplA~~m---ag~v~i~~Evd~~ 196 (551)
T 1x87_A 122 IMYGQMTAGSWIYIGSQGIVQGTYETFAEVARQHFGGTLAGTITLTAGLGGMG--GAQPLAVTM---NGGVCLAIEVDPA 196 (551)
T ss_dssp --------CCSCCCTTHHHHHHHHHHHHHHHHHHSTTCCTTCEEEEECCSTTG--GGHHHHHHH---TTCEEEEEESCHH
T ss_pred CEECCCCCCEEEEECCCCEEECHHHHHHHHHHHHCCCCCCCCEEEECCCCCCC--CCCCHHHHC---CCCEEEEEEECHH
T ss_conf 51157441002477376110148999999999872876566078723777655--555121310---5743999994899
Q ss_pred CCC
Q ss_conf 004
Q gi|254781176|r 140 HFE 142 (502)
Q Consensus 140 ~~e 142 (502)
..+
T Consensus 197 ri~ 199 (551)
T 1x87_A 197 RIQ 199 (551)
T ss_dssp HHH
T ss_pred HHH
T ss_conf 999
No 242
>2om2_B Regulator of G-protein signalling 14 goloco motif peptide; arginine finger, RGS14 goloco, signaling protein; HET: GDP; 2.20A {Homo sapiens} PDB: 1kjy_B*
Probab=37.69 E-value=8 Score=16.42 Aligned_cols=13 Identities=31% Similarity=0.726 Sum_probs=10.5
Q ss_pred CCCCCCCCCHHHC
Q ss_conf 2100025320220
Q gi|254781176|r 486 CEEDKLEIPAFLR 498 (502)
Q Consensus 486 ~EEDdLEIPAFLR 498 (502)
-..++|+.|-|||
T Consensus 24 L~Ke~l~lP~FL~ 36 (36)
T 2om2_B 24 LRKEDLVLPEFLQ 36 (36)
T ss_dssp CCTTTTCCCGGGC
T ss_pred CCHHHHCCHHHCC
T ss_conf 4198712455309
No 243
>1cp2_A CP2, nitrogenase iron protein; oxidoreductase; 1.93A {Clostridium pasteurianum} SCOP: c.37.1.10
Probab=36.93 E-value=15 Score=14.30 Aligned_cols=37 Identities=24% Similarity=0.498 Sum_probs=25.5
Q ss_pred EEEEEEECCCHHHHHHHHHHC--CCCCCEEEEECCCHHH
Q ss_conf 179999668147999999985--8998449998255788
Q gi|254781176|r 16 RITVFGVGGGGGNAVNNMVSS--GLQGVNFVVANTDAQA 52 (502)
Q Consensus 16 ~i~v~g~gg~g~n~~~~~~~~--~~~~~~~~~~ntd~~~ 52 (502)
+|.|+|=||.|--++...+-. .-.|-..++++.|.|.
T Consensus 3 ~Iai~gKGGVGKTT~a~nLA~~La~~G~rVLlID~Dpq~ 41 (269)
T 1cp2_A 3 QVAIYGKGGIGKSTTTQNLTSGLHAMGKTIMVVGCDPKA 41 (269)
T ss_dssp EEEEEECTTSSHHHHHHHHHHHHHTTTCCEEEEEECTTS
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCC
T ss_conf 999989998769999999999999789978999588999
No 244
>2fkn_A Urocanate hydratase; rossman fold, lyase; HET: NAD; 2.20A {Bacillus subtilis}
Probab=36.89 E-value=15 Score=14.30 Aligned_cols=73 Identities=19% Similarity=0.257 Sum_probs=43.5
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHH-----HHHHHHHHCC--CCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEEC
Q ss_conf 554255678888838999999972-----9999997269--989999803676667407899999998649849999504
Q gi|254781176|r 65 GSGITEGLGAGSHPEVGRAAAEEC-----IDEITEMLDK--THMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTK 137 (502)
Q Consensus 65 g~~~~~g~g~g~~~~~g~~~a~~~-----~~~i~~~~~~--~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~ 137 (502)
|-.-...+-||+=--||-+-..+. ...-++.+.+ +..+|+||||||=- ||-|--+.+ .|...+++=.-
T Consensus 121 Gl~mYGQMTAGsw~YIG~QGIvqGTyeT~~~aark~~g~~L~Gk~~vTaGLGGMg--GAQplA~~m---ag~v~i~~Evd 195 (552)
T 2fkn_A 121 GLMMYGQMTAGSWIYIGSQGILQGTYETFAELARQHFGGSLKGTLTLTAGLGGMG--GAQPLSVTM---NEGVVIAVEVD 195 (552)
T ss_dssp TCCCBCTTTTTTTCCCTTHHHHHHHHHHHHHHHHHHSSSCCTTCEEEEECCSTTT--THHHHHHHH---TTCEEEEEESC
T ss_pred CCCEECCCCCEEEEEECCCCEECCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCC--CCCCHHHEE---CCCEEEEEEEC
T ss_conf 7652356442025897565401006799999999864887565089822767665--554112100---67349999968
Q ss_pred CCCCC
Q ss_conf 30004
Q gi|254781176|r 138 PFHFE 142 (502)
Q Consensus 138 pf~~e 142 (502)
|-..+
T Consensus 196 ~~ri~ 200 (552)
T 2fkn_A 196 EKRID 200 (552)
T ss_dssp HHHHH
T ss_pred HHHHH
T ss_conf 99999
No 245
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center for structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=36.86 E-value=15 Score=14.29 Aligned_cols=133 Identities=17% Similarity=0.229 Sum_probs=72.1
Q ss_pred CCEEEEEEECCCHHHH-HHHHHHCCCCCCEEEE-ECCCHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 8617999966814799-9999985899844999-8255788551899704851554255678888838999999972999
Q gi|254781176|r 14 KPRITVFGVGGGGGNA-VNNMVSSGLQGVNFVV-ANTDAQALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAEECIDE 91 (502)
Q Consensus 14 ~~~i~v~g~gg~g~n~-~~~~~~~~~~~~~~~~-~ntd~~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~~~~ 91 (502)
|.||-|||+|..|-.. +..+ . ...++++++ ++.|+..+.... -+... .+.
T Consensus 7 ~irigiIG~G~~~~~~h~~~~-~-~~~~~~lvav~d~~~~~~~~~~------~~~~~--------------------~~~ 58 (352)
T 3kux_A 7 KIKVGLLGYGYASKTFHAPLI-M-GTPGLELAGVSSSDASKVHADW------PAIPV--------------------VSD 58 (352)
T ss_dssp CEEEEEECCSHHHHHTHHHHH-H-TSTTEEEEEEECSCHHHHHTTC------SSCCE--------------------ESC
T ss_pred CCEEEEECCCHHHHHHHHHHH-H-CCCCEEEEEEECCCHHHHHHHC------CCCCE--------------------ECC
T ss_conf 763999958799999999998-4-4998399999898999999746------99976--------------------898
Q ss_pred HHHHHC--CCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999726--998999980367666740789999999864984999950430004067888899999999986333545027
Q gi|254781176|r 92 ITEMLD--KTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPFHFEGSRRMRVAESGIEALQETVDTLIVIPN 169 (502)
Q Consensus 92 i~~~~~--~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf~~eg~~r~~~a~~~~~~l~~~~d~~i~i~n 169 (502)
+.++|. +.|.|+|. |-+.--+-+++.|=+.|.- .++-+|+.. ....|.+=++ +.+.....+.
T Consensus 59 ~~~ll~~~~iD~V~i~------tp~~~H~~~~~~al~~gkh--v~~EKP~a~----~~~ea~~l~~-~~~~~~~~~~--- 122 (352)
T 3kux_A 59 PQMLFNDPSIDLIVIP------TPNDTHFPLAQSALAAGKH--VVVDKPFTV----TLSQANALKE-HADDAGLLLS--- 122 (352)
T ss_dssp HHHHHHCSSCCEEEEC------SCTTTHHHHHHHHHHTTCE--EEECSSCCS----CHHHHHHHHH-HHHHTTCCEE---
T ss_pred HHHHHCCCCCCEEEEC------CCHHHHHHHHHHHHHCCCC--EECCCCCCC----CCCCCHHHHH-HHHHCCCCCE---
T ss_conf 9999569999989988------8688889889999985997--722687422----2232124566-7876386300---
Q ss_pred HHHHHHCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 888741366531899974467999999
Q gi|254781176|r 170 QNLFRIANDKTTFADAFSMADQVLYSG 196 (502)
Q Consensus 170 ~~l~~~~~~~~~~~~af~~~d~~l~~~ 196 (502)
.+-...+..+|..+-+++.++
T Consensus 123 ------v~~~~r~~p~~~~~k~~i~~g 143 (352)
T 3kux_A 123 ------VFHNRRWDSDFLTLKTLLAEG 143 (352)
T ss_dssp ------ECCGGGGCHHHHHHHHHHHHT
T ss_pred ------EEEEECHHHHHHHHHHHHHCC
T ss_conf ------111000003699999988658
No 246
>3hj6_A Fructokinase, FRK; fructose, transferase, carbohydrate ME; 2.80A {Halothermothrix orenii}
Probab=36.78 E-value=16 Score=14.28 Aligned_cols=135 Identities=13% Similarity=0.024 Sum_probs=61.4
Q ss_pred EECCCHHHHHHHHHHCCCCCCEEE-EECCCH------HHHHHCCCCEEEEECCCCCC---------------CCCCCCCH
Q ss_conf 966814799999998589984499-982557------88551899704851554255---------------67888883
Q gi|254781176|r 21 GVGGGGGNAVNNMVSSGLQGVNFV-VANTDA------QALMMSKAKQIIQLGSGITE---------------GLGAGSHP 78 (502)
Q Consensus 21 g~gg~g~n~~~~~~~~~~~~~~~~-~~ntd~------~~l~~~~~~~~~~~g~~~~~---------------g~g~g~~~ 78 (502)
-+||+|.|+.-.+.+.|.+ +.|+ ++-.|. +.|....+......-...++ -...++..
T Consensus 52 ~~GG~~~NvA~~la~lG~~-~~~is~vG~D~~g~~i~~~l~~~gI~~~~i~~~~~~~t~~~~i~~~~~~~~~~~~~~~~~ 130 (327)
T 3hj6_A 52 HFGGSPANIAVNLSRLGKK-VALISRLGADAFGNYLLDVLKGEQIITDGIQQDKERRTTIVYVSKSTRTPDWLPYREADM 130 (327)
T ss_dssp EEECHHHHHHHHHHHTTCC-EEEECEEESSHHHHHHHHHHHHTTCBCTTCEEESSSCCCEEEECCCTTCCCEEEECSGGG
T ss_pred CCCCHHHHHHHHHHHCCCC-EEEEEEECCCHHHHHHHHHHHHCCEEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCHHH
T ss_conf 7786799999999986998-799999489879999999875333244577741665521234305654322123430232
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCEEEEEECC-CCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHH
Q ss_conf 899999997299999972699899998036-7666740789999999864984999950430004067888899999999
Q gi|254781176|r 79 EVGRAAAEECIDEITEMLDKTHMCFVTAGM-GGGTGTGAAPIIAKIARNKGVLTVGVVTKPFHFEGSRRMRVAESGIEAL 157 (502)
Q Consensus 79 ~~g~~~a~~~~~~i~~~~~~~~~~~~~ag~-gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf~~eg~~r~~~a~~~~~~l 157 (502)
...........++....+++.... ......-......+.||+.+..+.--...+..+.... .....-+..+
T Consensus 131 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~--~~~~~~~~~~ 202 (327)
T 3hj6_A 131 ------YLQEDDIIFELIKRSKVFHLSTFILSRKPARDTAIKAFNYAREQGKIVCFDPCYRKVLWPEG--DDGAGVVEEI 202 (327)
T ss_dssp ------GCCSCCCHHHHHC--CEEEEESHHHHSHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGSCSS--SCSHHHHHHH
T ss_pred ------HCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCHHHHHCCCCH--HHHHHHHCCC
T ss_conf ------20235556678765222221122124663167899999999975996996420111115411--2210100033
Q ss_pred HHHHHHH
Q ss_conf 9863335
Q gi|254781176|r 158 QETVDTL 164 (502)
Q Consensus 158 ~~~~d~~ 164 (502)
.+++|.+
T Consensus 203 ~~~~d~~ 209 (327)
T 3hj6_A 203 ISRADFV 209 (327)
T ss_dssp HTTCSEE
T ss_pred CCCCCEE
T ss_conf 4358676
No 247
>2dgd_A 223AA long hypothetical arylmalonate decarboxylase; octamer, alpha/beta structure, lyase; 2.90A {Sulfolobus tokodaii}
Probab=36.52 E-value=16 Score=14.26 Aligned_cols=29 Identities=14% Similarity=0.098 Sum_probs=20.4
Q ss_pred EEEEEEEECCCCCHHHHHHHHHHHCCCCC
Q ss_conf 58998761486204899998875270100
Q gi|254781176|r 226 RAMMGTGEASGHGRGIQAAEAAVANPLLD 254 (502)
Q Consensus 226 ~a~~g~g~~~g~~r~~~a~~~a~~~pll~ 254 (502)
.|++-.|.+-.--++...+|+.+.-|.+.
T Consensus 173 dav~iscT~l~t~~~i~~lE~~lg~PVis 201 (223)
T 2dgd_A 173 DAVYIACTALSTYEAVQYLHEDLDMPVVS 201 (223)
T ss_dssp SEEEECCTTSCCTTHHHHHHHHHTSCEEE
T ss_pred CEEEEECCCCCHHHHHHHHHHHHCCCEEE
T ss_conf 78999415863888999999998989997
No 248
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=36.09 E-value=16 Score=14.21 Aligned_cols=104 Identities=15% Similarity=0.249 Sum_probs=55.1
Q ss_pred CHHH-C-CCE-EEEEEEC----CCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHC-------CCCEEEEECCCCCCCCCC
Q ss_conf 8454-3-861-7999966----814799999998589984499982557885518-------997048515542556788
Q gi|254781176|r 9 DITE-L-KPR-ITVFGVG----GGGGNAVNNMVSSGLQGVNFVVANTDAQALMMS-------KAKQIIQLGSGITEGLGA 74 (502)
Q Consensus 9 ~~~~-~-~~~-i~v~g~g----g~g~n~~~~~~~~~~~~~~~~~~ntd~~~l~~~-------~~~~~~~~g~~~~~g~g~ 74 (502)
+|++ | +|| |.|||.- -.|+.++.+|.+.|.+ +..+-.|...+.+.-. ..+.++-+=.=
T Consensus 5 ~i~~~L~~pksIAVVGaS~~~~k~g~~v~~~L~~~g~~-~~~v~p~~~~~~i~g~~~~~sl~dip~~vDlv~i------- 76 (140)
T 1iuk_A 5 ELRAYLSQAKTIAVLGAHKDPSRPAHYVPRYLREQGYR-VLPVNPRFQGEELFGEEAVASLLDLKEPVDILDV------- 76 (140)
T ss_dssp HHHHHHHHCCEEEEETCCSSTTSHHHHHHHHHHHTTCE-EEEECGGGTTSEETTEECBSSGGGCCSCCSEEEE-------
T ss_pred HHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHCCCC-EEEECCCCCCCEECCEEECCCHHHCCCCCCEEEE-------
T ss_conf 99999857896999810699998399999999978993-3887877765355682720656764898738999-------
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEE
Q ss_conf 88838999999972999999726998999980367666740789999999864984999
Q gi|254781176|r 75 GSHPEVGRAAAEECIDEITEMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVG 133 (502)
Q Consensus 75 g~~~~~g~~~a~~~~~~i~~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~ 133 (502)
-+......+-.++..+. |...+++..|. ..+-++++|++.|+.+|+
T Consensus 77 ----~vp~~~v~~~v~e~~~~--g~~~v~~q~G~-------~~~e~~~~a~~~Gi~vI~ 122 (140)
T 1iuk_A 77 ----FRPPSALMDHLPEVLAL--RPGLVWLQSGI-------RHPEFEKALKEAGIPVVA 122 (140)
T ss_dssp ----CSCHHHHTTTHHHHHHH--CCSCEEECTTC-------CCHHHHHHHHHTTCCEEE
T ss_pred ----EECHHHHHHHHHHHHHC--CCCEEEECCCC-------CCHHHHHHHHHCCCEEEC
T ss_conf ----80889999999999962--98989989896-------899999999995997992
No 249
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Porphyromonas gingivalis W83}
Probab=36.05 E-value=10 Score=15.71 Aligned_cols=34 Identities=29% Similarity=0.558 Sum_probs=25.8
Q ss_pred HCCC-EEEEEEECCCHHHHHHHHHHCCC-----CCCEEEE
Q ss_conf 4386-17999966814799999998589-----9844999
Q gi|254781176|r 12 ELKP-RITVFGVGGGGGNAVNNMVSSGL-----QGVNFVV 45 (502)
Q Consensus 12 ~~~~-~i~v~g~gg~g~n~~~~~~~~~~-----~~~~~~~ 45 (502)
+-+| ||.|+|.|.-|+=.--+|.+.|- ..|.|++
T Consensus 5 ~~~~MkI~IlGaGaiG~~~a~~L~~~g~~~~~~~~Vt~i~ 44 (317)
T 2qyt_A 5 NQQPIKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIA 44 (317)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEEC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCEEEEEEE
T ss_conf 8999989999968999999999998599888751679992
No 250
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=36.05 E-value=16 Score=14.20 Aligned_cols=34 Identities=26% Similarity=0.334 Sum_probs=16.7
Q ss_pred CCCCEEEEEECCCCCCCCCHH-HHHHHHHHHCCCEEEEEEECC
Q ss_conf 699899998036766674078-999999986498499995043
Q gi|254781176|r 97 DKTHMCFVTAGMGGGTGTGAA-PIIAKIARNKGVLTVGVVTKP 138 (502)
Q Consensus 97 ~~~~~~~~~ag~gggtgtg~~-p~ia~~a~~~~~~~~~~v~~p 138 (502)
+.+|+|+| |.|+| -.-|--|.+.|+-|+-+--.|
T Consensus 120 e~~DVvVV--------G~G~AGl~AAi~Aae~GakVillEK~~ 154 (566)
T 1qo8_A 120 ETTQVLVV--------GAGSAGFNASLAAKKAGANVILVDKAP 154 (566)
T ss_dssp EEEEEEEE--------CCSHHHHHHHHHHHHHTCCEEEECSSS
T ss_pred CCCCEEEE--------CCCHHHHHHHHHHHHCCCCEEEEECCC
T ss_conf 85997998--------956999999999997899389997899
No 251
>1fnb_A Ferredoxin-NADP+ reductase; oxidoreductase (NADP+(A),ferredoxin(A)); HET: FAD; 1.70A {Spinacia oleracea} SCOP: b.43.4.2 c.25.1.1 PDB: 1fnc_A* 1fnd_A* 1bx1_A* 1frq_A* 1frn_A* 1bx0_A* 1qg0_A* 1qga_A* 1qfz_A* 1qfy_A* 1gaw_A* 1gaq_A* 1sm4_A*
Probab=35.52 E-value=15 Score=14.34 Aligned_cols=21 Identities=33% Similarity=0.564 Sum_probs=14.6
Q ss_pred CCCEEEEEECCCCCCCCCHHHHHHHHH
Q ss_conf 998999980367666740789999999
Q gi|254781176|r 98 KTHMCFVTAGMGGGTGTGAAPIIAKIA 124 (502)
Q Consensus 98 ~~~~~~~~ag~gggtgtg~~p~ia~~a 124 (502)
+.++||| ++|||.||..+=+-
T Consensus 162 ~~~lvlI------AgGtGIaP~~s~l~ 182 (314)
T 1fnb_A 162 NATIIML------GTGTGIAPFRSFLW 182 (314)
T ss_dssp TCEEEEE------EEGGGGHHHHHHHH
T ss_pred CCCEEEE------ECCCCCCHHHHHHH
T ss_conf 9878999------66876644999999
No 252
>3n0w_A ABC branched chain amino acid family transporter, periplasmic ligand binding protein...; receptor family ligand binding region; HET: MSE; 1.88A {Burkholderia xenovorans}
Probab=35.28 E-value=16 Score=14.12 Aligned_cols=52 Identities=21% Similarity=0.260 Sum_probs=37.4
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEE
Q ss_conf 888838999999972999999726998999980367666740789999999864984999950
Q gi|254781176|r 74 AGSHPEVGRAAAEECIDEITEMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVT 136 (502)
Q Consensus 74 ~g~~~~~g~~~a~~~~~~i~~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~ 136 (502)
.+++|+.+.++|++-.++ ++.++|| |..+|+.+..++.++++.+++.+....
T Consensus 54 ~~~~p~~a~~~a~~Lv~~-----~~V~~vi------G~~~S~~~~a~~~~~~~~~vp~i~~~a 105 (379)
T 3n0w_A 54 YQMKTDVALSIAREWFDR-----DGVDAIF------DVVNSGTALAINNLVKDKKKLAFITAA 105 (379)
T ss_dssp CTTCHHHHHHHHHHHHHH-----SCCCEEE------ECCCHHHHHHHHHHHHHHTCEEEECSC
T ss_pred CCCCHHHHHHHHHHHHHH-----CCCEEEE------EECCHHHHHHHHHHHHHHCCCCEECCC
T ss_conf 999989999999999974-----7986999------614219899999999872477233035
No 253
>3i09_A Periplasmic branched-chain amino acid-binding protein; YP_104442.1, periplasmic binding protein BMA293, structural genomics; HET: MSE CIT; 1.80A {Burkholderia mallei}
Probab=34.98 E-value=16 Score=14.09 Aligned_cols=52 Identities=17% Similarity=0.328 Sum_probs=36.8
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEE
Q ss_conf 888838999999972999999726998999980367666740789999999864984999950
Q gi|254781176|r 74 AGSHPEVGRAAAEECIDEITEMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVT 136 (502)
Q Consensus 74 ~g~~~~~g~~~a~~~~~~i~~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~ 136 (502)
.+++|+.+.++|++-.++ -.+.+|+ |+.+|+.+-.++.++.+.+++.++...
T Consensus 52 ~~~~p~~a~~~a~~li~~-------d~V~aii----G~~~S~~~~a~~~~~~~~~vp~i~~~a 103 (375)
T 3i09_A 52 HQNKADIAASKAREWMDR-------GGLDLLV----GGTNSATALSMNQVAAEKKKVYINIGA 103 (375)
T ss_dssp CTTCHHHHHHHHHHHHHH-------SCEEEEE----ECSCHHHHHHHHHHHHHHTCEEEECSC
T ss_pred CCCCHHHHHHHHHHHHHH-------CCCEEEE----EECCCHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 999999999999999972-------8976999----725606778877778751863023421
No 254
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; HET: NAD; 2.05A {Pyrococcus horikoshii OT3} PDB: 2dfv_A* 3gfb_A*
Probab=34.93 E-value=17 Score=14.08 Aligned_cols=34 Identities=21% Similarity=0.266 Sum_probs=18.9
Q ss_pred CCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEE-EEECC
Q ss_conf 98999980367666740789999999864984999-95043
Q gi|254781176|r 99 THMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVG-VVTKP 138 (502)
Q Consensus 99 ~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~-~v~~p 138 (502)
.+-|.|. |- ||.| -...++||.+|+..|. +...|
T Consensus 168 g~~vlV~-Ga-G~vG----~~a~qla~~~g~~~v~~~~~~~ 202 (348)
T 2d8a_A 168 GKSVLIT-GA-GPLG----LLGIAVAKASGAYPVIVSEPSD 202 (348)
T ss_dssp TCCEEEE-CC-SHHH----HHHHHHHHHTTCCSEEEECSCH
T ss_pred CCEEEEE-CC-CHHH----HHHHHHHHHCCCCEEEEEECCH
T ss_conf 5989998-97-9999----9999999985998799996999
No 255
>1efp_A ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3 c.31.1.2
Probab=34.91 E-value=17 Score=14.08 Aligned_cols=62 Identities=13% Similarity=0.111 Sum_probs=33.7
Q ss_pred EEEEECCCCCCCC-CHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHH
Q ss_conf 9998036766674-0789999999864984999950430004067888899999999986--33354502788874
Q gi|254781176|r 102 CFVTAGMGGGTGT-GAAPIIAKIARNKGVLTVGVVTKPFHFEGSRRMRVAESGIEALQET--VDTLIVIPNQNLFR 174 (502)
Q Consensus 102 ~~~~ag~gggtgt-g~~p~ia~~a~~~~~~~~~~v~~pf~~eg~~r~~~a~~~~~~l~~~--~d~~i~i~n~~l~~ 174 (502)
|++.|---.|.=+ .++--+...||.+|-+++.++- .. . ..-..+|.++ +|-++++++..|-.
T Consensus 2 ILViaE~~~G~l~~~st~Ell~aAr~lgdv~alv~G----~~-~------~~~a~~l~~~~GadkV~~~d~~~l~~ 66 (307)
T 1efp_A 2 VLLLGEVTNGALNRDATAKAVAAVKALGDVTVLCAG----AS-A------KAAAEEAAKIAGVAKVLVAEDALYGH 66 (307)
T ss_dssp EEEECCBSSSCBCHHHHHHHHHHHGGGSCEEEEEEE----TT-C------HHHHHHHHTSTTEEEEEEEECGGGTT
T ss_pred EEEEEEECCCEECHHHHHHHHHHHHHHCCCEEEEEC----CC-C------HHHHHHHHHCCCCCEEEEECCCCCCC
T ss_conf 899999659998888999999999840981799988----99-5------79999986356987899956720012
No 256
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=34.50 E-value=17 Score=14.03 Aligned_cols=108 Identities=16% Similarity=0.165 Sum_probs=62.5
Q ss_pred CCCHHHCCCEEEEEEE-CCCHHHHHHHHHHCCCCCCEEEEECC-CHH-HHHH-CCCCEEEEECCCCCCCCCCCCCHHHHH
Q ss_conf 7884543861799996-68147999999985899844999825-578-8551-899704851554255678888838999
Q gi|254781176|r 7 NMDITELKPRITVFGV-GGGGGNAVNNMVSSGLQGVNFVVANT-DAQ-ALMM-SKAKQIIQLGSGITEGLGAGSHPEVGR 82 (502)
Q Consensus 7 ~~~~~~~~~~i~v~g~-gg~g~n~~~~~~~~~~~~~~~~~~nt-d~~-~l~~-~~~~~~~~~g~~~~~g~g~g~~~~~g~ 82 (502)
+|+....|-||.|+|- |--|.+.+..+.+.|.. |..+.=+. ... .+.. .....++..|.-
T Consensus 4 ~~~~~~mk~KIlVtGatG~iG~~l~~~Ll~~g~~-V~~l~R~~~~~~~~~~~l~~~~~~~~~~d~--------------- 67 (318)
T 2r6j_A 4 GMEENGMKSKILIFGGTGYIGNHMVKGSLKLGHP-TYVFTRPNSSKTTLLDEFQSLGAIIVKGEL--------------- 67 (318)
T ss_dssp -----CCCCCEEEETTTSTTHHHHHHHHHHTTCC-EEEEECTTCSCHHHHHHHHHTTCEEEECCT---------------
T ss_pred CCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEECCCCCCHHHHHHHHCCCCEEEEEEC---------------
T ss_conf 7676699983999899968999999999978697-999978974236677764118818999114---------------
Q ss_pred HHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEE
Q ss_conf 999972999999726998999980367666740789999999864984999950
Q gi|254781176|r 83 AAAEECIDEITEMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVT 136 (502)
Q Consensus 83 ~~a~~~~~~i~~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~ 136 (502)
.+.+.+...+.+.+.||-+++...-. .....+...++..++..+...+
T Consensus 68 ----~~~~~~~~~~~~~~~vi~~~~~~~~~--~~~~~~~~~~~~~~v~~~v~ss 115 (318)
T 2r6j_A 68 ----DEHEKLVELMKKVDVVISALAFPQIL--DQFKILEAIKVAGNIKRFLPSD 115 (318)
T ss_dssp ----TCHHHHHHHHTTCSEEEECCCGGGST--THHHHHHHHHHHCCCCEEECSC
T ss_pred ----CCCHHHHHHHCCCCEEEECCCCCCCC--CHHHHHHHHHHCCCEEEEEEEE
T ss_conf ----43033677614455776425665321--1000023333127742999987
No 257
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, cytoplasm, FAD, flavoprotein; HET: MSE FAD GTT; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=34.41 E-value=17 Score=14.02 Aligned_cols=33 Identities=24% Similarity=0.436 Sum_probs=28.6
Q ss_pred EEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCC
Q ss_conf 1799996681479999999858998449998255
Q gi|254781176|r 16 RITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTD 49 (502)
Q Consensus 16 ~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd 49 (502)
|+.|||=|-|||-|--..-+.|++ |-++-++++
T Consensus 3 ~ViVVGgGhAG~EAA~a~Ar~G~~-t~L~tm~~~ 35 (443)
T 3g5s_A 3 RVNVVGAGLAGSEAAWTLLRLGVP-VRLFEMRPK 35 (443)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCC-EEEECCTTT
T ss_pred CEEEECCCHHHHHHHHHHHHCCCC-EEEEEECCC
T ss_conf 279988978999999999978997-899994145
No 258
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=34.13 E-value=17 Score=13.99 Aligned_cols=32 Identities=22% Similarity=0.417 Sum_probs=26.8
Q ss_pred CCCEEEEEEECCCHHHHHHHHHHCCCCCCEEE
Q ss_conf 38617999966814799999998589984499
Q gi|254781176|r 13 LKPRITVFGVGGGGGNAVNNMVSSGLQGVNFV 44 (502)
Q Consensus 13 ~~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~ 44 (502)
-++||.|||=|=||..+--++.+.|+..|..+
T Consensus 7 ~~k~V~IIGaG~aGL~aA~~L~~~G~~~V~Vl 38 (516)
T 1rsg_A 7 AKKKVIIIGAGIAGLKAASTLHQNGIQDCLVL 38 (516)
T ss_dssp EEEEEEEECCBHHHHHHHHHHHHTTCCSEEEE
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCCEEEE
T ss_conf 97988998978899999999986799978999
No 259
>1fs5_A Glucosamine-6-phosphate deaminase; allosteric enzyme, entropic effects, aldose-ketose isomerase, multiple conformers; HET: 16G TLA; 1.73A {Escherichia coli} SCOP: c.124.1.1 PDB: 1cd5_A 1fqo_A* 1frz_A* 1dea_A* 1fs6_A 1fsf_A 1hor_A* 1hot_A* 2wu1_A* 1jt9_A
Probab=33.99 E-value=17 Score=13.98 Aligned_cols=52 Identities=21% Similarity=0.263 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCC
Q ss_conf 3899999997299999972699899998036766674078999999986498
Q gi|254781176|r 78 PEVGRAAAEECIDEITEMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGV 129 (502)
Q Consensus 78 ~~~g~~~a~~~~~~i~~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~ 129 (502)
-++++.||..-.+.|++.+...+-.|..|-=||.|-.+.-..+++..++.++
T Consensus 10 ee~~~~aA~~i~~~I~~~~~~~~~~~~i~lsgGstP~~~y~~L~~~~~~~~i 61 (266)
T 1fs5_A 10 EQVGKWAARHIVNRINAFKPTADRPFVLGLPTGGTPMTTYKALVEMHKAGQV 61 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCSSSCEEEEECCSSTTHHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCC
T ss_conf 9999999999999999735356897799989995599999999988861599
No 260
>2o2z_A Hypothetical protein; NP_244435.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: NAD; 2.60A {Bacillus halodurans} PDB: 2hzb_A
Probab=33.97 E-value=17 Score=13.97 Aligned_cols=32 Identities=25% Similarity=0.367 Sum_probs=16.4
Q ss_pred CCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCC
Q ss_conf 676667407899999998649849999504300040
Q gi|254781176|r 108 MGGGTGTGAAPIIAKIARNKGVLTVGVVTKPFHFEG 143 (502)
Q Consensus 108 ~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf~~eg 143 (502)
+||||| ++.+++-.|....=..+|| ..|.--|
T Consensus 10 l~GGtG---~~~ll~gL~~~~~~lt~IV-n~~Ddgg 41 (323)
T 2o2z_A 10 FGGGTG---LSVLLRGLKTFPVSITAIV-TVADDGG 41 (323)
T ss_dssp EECSHH---HHHHHHHHTTSSEEEEEEE-CCCCCSH
T ss_pred ECCCHH---HHHHHHHHHHCCCCEEEEE-ECCCCCC
T ss_conf 878301---8999999975899859999-8873871
No 261
>1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A
Probab=33.91 E-value=17 Score=13.97 Aligned_cols=10 Identities=10% Similarity=0.119 Sum_probs=4.7
Q ss_pred EEEEEEECCC
Q ss_conf 4999950430
Q gi|254781176|r 130 LTVGVVTKPF 139 (502)
Q Consensus 130 ~~~~~v~~pf 139 (502)
..|+.+-+||
T Consensus 9 ~Ivg~~rTpf 18 (397)
T 1wl4_A 9 VIVSAARTII 18 (397)
T ss_dssp EEEEEEECCC
T ss_pred EEEECCCCCC
T ss_conf 9994453712
No 262
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase, lysine biosynthesis; 1.50A {Hahella chejuensis}
Probab=33.61 E-value=17 Score=13.93 Aligned_cols=62 Identities=21% Similarity=0.203 Sum_probs=34.5
Q ss_pred EEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 980367666740789999999864984999950430004067888899999999986333545027
Q gi|254781176|r 104 VTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPFHFEGSRRMRVAESGIEALQETVDTLIVIPN 169 (502)
Q Consensus 104 ~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf~~eg~~r~~~a~~~~~~l~~~~d~~i~i~n 169 (502)
|.+|-| ++.|--+--.|+.|++.|+--+.+ ..|+.+-... ....+-..++.+.+|.=|++-|
T Consensus 72 vi~gv~-~~~~~~ai~~a~~a~~~G~d~i~~-~~P~~~~~~~--~~~~~~f~~i~~a~~iPi~lYn 133 (297)
T 2rfg_A 72 VIAGAG-SNNPVEAVRYAQHAQQAGADAVLC-VAGYYNRPSQ--EGLYQHFKMVHDAIDIPIIVYN 133 (297)
T ss_dssp BEEECC-CSSHHHHHHHHHHHHHHTCSEEEE-CCCTTTCCCH--HHHHHHHHHHHHHCSSCEEEEE
T ss_pred EEEECC-CHHHHHHHHHHHHHHHHCCCEEEC-CCCCCCCCCH--HHHHHHHHHHHHHCCCCEEEEE
T ss_conf 999688-601999999999999809998970-6887889899--9999999999986799789997
No 263
>3lo8_A Ferredoxin--NADP reductase; electron transport, oxidoreductase, FAD, flavoprotein; HET: FAD; 1.05A {Zea mays} PDB: 3lvb_A* 1jb9_A*
Probab=33.60 E-value=17 Score=13.97 Aligned_cols=15 Identities=47% Similarity=0.727 Sum_probs=11.4
Q ss_pred CCCCCHHHHHHHHHH
Q ss_conf 667407899999998
Q gi|254781176|r 111 GTGTGAAPIIAKIAR 125 (502)
Q Consensus 111 gtgtg~~p~ia~~a~ 125 (502)
++|||.||.++=+-.
T Consensus 167 a~GtGIaP~~s~l~~ 181 (311)
T 3lo8_A 167 ATGTGVAPFRGYLRR 181 (311)
T ss_dssp EEGGGGHHHHHHHHH
T ss_pred ECCCCHHHHHHHHHH
T ss_conf 875047689999999
No 264
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=33.23 E-value=18 Score=13.89 Aligned_cols=139 Identities=17% Similarity=0.172 Sum_probs=65.4
Q ss_pred CCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEE-----CCCHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 861799996681479999999858998449998-----255788551899704851554255678888838999999972
Q gi|254781176|r 14 KPRITVFGVGGGGGNAVNNMVSSGLQGVNFVVA-----NTDAQALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAEEC 88 (502)
Q Consensus 14 ~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~-----ntd~~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~ 88 (502)
+.||.|||.||.|...+..+. ...+..++ +.|...+.... +.+|.. |. .-.+
T Consensus 2 ~iri~iiG~G~~~~~~l~~l~----~~~~i~~v~~~~~~~~~~~~~~~~------------~~~~~~--~~-----~y~~ 58 (337)
T 3ip3_A 2 SLKICVIGSSGHFRYALEGLD----EECSITGIAPGVPEEDLSKLEKAI------------SEMNIK--PK-----KYNN 58 (337)
T ss_dssp CEEEEEECSSSCHHHHHTTCC----TTEEEEEEECSSTTCCCHHHHHHH------------HTTTCC--CE-----ECSS
T ss_pred CCEEEEECCCHHHHHHHHHHC----CCCCEEEEEECCCCCCHHHHHHHH------------HHHCCC--CE-----EECC
T ss_conf 317999925999999999732----169989999577885899999999------------984999--70-----4099
Q ss_pred HHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH-HHHH
Q ss_conf 999999726998999980367666740789999999864984999950430004067888899999999986333-5450
Q gi|254781176|r 89 IDEITEMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPFHFEGSRRMRVAESGIEALQETVDT-LIVI 167 (502)
Q Consensus 89 ~~~i~~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf~~eg~~r~~~a~~~~~~l~~~~d~-~i~i 167 (502)
.+++.+. .+.|+|||. |-+-.-.-+++.|-+.|+-+ ++-+|+..- ...|+ .|.++.+.... +++.
T Consensus 59 ~~ell~~-~~iD~V~i~------tp~~~H~~~~~~al~~gk~V--l~EKP~a~~----~~ea~-~l~~~~~~~~~~v~~~ 124 (337)
T 3ip3_A 59 WWEMLEK-EKPDILVIN------TVFSLNGKILLEALERKIHA--FVEKPIATT----FEDLE-KIRSVYQKVRNEVFFT 124 (337)
T ss_dssp HHHHHHH-HCCSEEEEC------SSHHHHHHHHHHHHHTTCEE--EECSSSCSS----HHHHH-HHHHHHHHHTTTCCEE
T ss_pred HHHHHCC-CCCCEEEEE------CCCHHHHHHHHHHHHCCCEE--EEECCCCCC----CHHHH-HHHHHHHCCCCCCCEE
T ss_conf 9999648-998889995------88616799999999879969--994785444----01222-3455432002432211
Q ss_pred HHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 278887413665318999744679999998
Q gi|254781176|r 168 PNQNLFRIANDKTTFADAFSMADQVLYSGV 197 (502)
Q Consensus 168 ~n~~l~~~~~~~~~~~~af~~~d~~l~~~v 197 (502)
.+-..-|..+|..+-+++..+.
T Consensus 125 --------v~~~~r~~p~~~~~~~~i~~g~ 146 (337)
T 3ip3_A 125 --------AMFGIRYRPHFLTAKKLVSEGA 146 (337)
T ss_dssp --------ECCGGGGSHHHHHHHHHHHHTT
T ss_pred --------CCEEEECCCHHHHHHHHCCCCC
T ss_conf --------1245541612333444211100
No 265
>1hv8_A Putative ATP-dependent RNA helicase MJ0669; RNA-binding protein, ATPase, RNA binding protein; 3.00A {Methanocaldococcus jannaschii} SCOP: c.37.1.19 c.37.1.19
Probab=33.21 E-value=18 Score=13.89 Aligned_cols=48 Identities=23% Similarity=0.323 Sum_probs=30.2
Q ss_pred HHHHHHHCCCCEEEEEECCCCC-CCCCHHHHHHHHHHHCCCEEEEEEEC
Q ss_conf 9999972699899998036766-67407899999998649849999504
Q gi|254781176|r 90 DEITEMLDKTHMCFVTAGMGGG-TGTGAAPIIAKIARNKGVLTVGVVTK 137 (502)
Q Consensus 90 ~~i~~~~~~~~~~~~~ag~ggg-tgtg~~p~ia~~a~~~~~~~~~~v~~ 137 (502)
..|..+|+|-+=|++.|.-|.| |-+-..|+++.+.+..+..++-+|..
T Consensus 35 ~ai~~~l~g~~~vlv~apTGsGKT~~~~lp~l~~~~~~~~~~~li~~p~ 83 (367)
T 1hv8_A 35 KVIPLFLNDEYNIVAQARTGSGKTASFAIPLIELVNENNGIEAIILTPT 83 (367)
T ss_dssp HHHHHHHHTCSEEEEECCSSSSHHHHHHHHHHHHSCSSSSCCEEEECSC
T ss_pred HHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEH
T ss_conf 9999997599999998899976999999999998654289669999510
No 266
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium frigidimaris KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=32.78 E-value=18 Score=13.84 Aligned_cols=107 Identities=12% Similarity=0.100 Sum_probs=49.5
Q ss_pred CCEEEEEEECC-CHHHHHHHHHHCCCCCCEEEEECCCHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 86179999668-14799999998589984499982557885518997048515542556788888389999999729999
Q gi|254781176|r 14 KPRITVFGVGG-GGGNAVNNMVSSGLQGVNFVVANTDAQALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAEECIDEI 92 (502)
Q Consensus 14 ~~~i~v~g~gg-~g~n~~~~~~~~~~~~~~~~~~ntd~~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~~~~i 92 (502)
++||.|.|..| -|...+.++++.+-. ...++.+-...............+ . ..| ..+.+.+
T Consensus 2 ~kKILItG~sGfiG~~l~~~L~~~~~~-~~v~~~~~~~~~~~~~~~~~~~~~-d--------~~d--------~~~~~~~ 63 (312)
T 2yy7_A 2 NPKILIIGACGQIGTELTQKLRKLYGT-ENVIASDIRKLNTDVVNSGPFEVV-N--------ALD--------FNQIEHL 63 (312)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHHHCG-GGEEEEESCCCSCHHHHSSCEEEC-C--------TTC--------HHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHHCCC-EEEEECCCCCCCHHHHCCCCEEEE-E--------CCC--------HHHHHHH
T ss_conf 970999758988999999999986696-699982576454545056887999-6--------478--------8999999
Q ss_pred HHHHCCCCEEEEEECCCCCCCCC-----------HHHHHHHHHHHCCCEEEEEEECCC
Q ss_conf 99726998999980367666740-----------789999999864984999950430
Q gi|254781176|r 93 TEMLDKTHMCFVTAGMGGGTGTG-----------AAPIIAKIARNKGVLTVGVVTKPF 139 (502)
Q Consensus 93 ~~~~~~~~~~~~~ag~gggtgtg-----------~~p~ia~~a~~~~~~~~~~v~~pf 139 (502)
.+.....++++.+|. .++++.. .+--+.++|+..++--+-+++.--
T Consensus 64 ~~~~~~~~~v~~~a~-~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~v~~~i~~SS~~ 120 (312)
T 2yy7_A 64 VEVHKITDIYLMAAL-LSATAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSSIA 120 (312)
T ss_dssp HHHTTCCEEEECCCC-CHHHHHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCEEGG
T ss_pred HHHCCCEEEEEECCC-CCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCC
T ss_conf 975498289862301-043244099999999999999999999970877069817702
No 267
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=32.61 E-value=18 Score=13.82 Aligned_cols=98 Identities=15% Similarity=0.145 Sum_probs=55.8
Q ss_pred EEEEEEE-CCCHHHHHHHHHHCCCCCCEEEEECC---CHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 1799996-68147999999985899844999825---5788551899704851554255678888838999999972999
Q gi|254781176|r 16 RITVFGV-GGGGGNAVNNMVSSGLQGVNFVVANT---DAQALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAEECIDE 91 (502)
Q Consensus 16 ~i~v~g~-gg~g~n~~~~~~~~~~~~~~~~~~nt---d~~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~~~~ 91 (502)
||.|.|. |--|.+++..+.+.|. +.+++.- +.+.|.... .++..| .++ +.+.
T Consensus 15 kilVtGatG~vG~~l~~~L~~~g~---~V~~l~R~~~~~~~l~~~~--~~~~~~-Dl~------------------d~~~ 70 (342)
T 2x4g_A 15 KYAVLGATGLLGHHAARAIRAAGH---DLVLIHRPSSQIQRLAYLE--PECRVA-EML------------------DHAG 70 (342)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTC---EEEEEECTTSCGGGGGGGC--CEEEEC-CTT------------------CHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCCHHHHHHCCCC--CEEEEE-ECC------------------CHHH
T ss_conf 499989998899999999997869---8999978811354503379--779994-089------------------9999
Q ss_pred HHHHHCCCCEEEEEECCCCCC----------CCCHHHHHHHHHHHCCCEEEEEEEC
Q ss_conf 999726998999980367666----------7407899999998649849999504
Q gi|254781176|r 92 ITEMLDKTHMCFVTAGMGGGT----------GTGAAPIIAKIARNKGVLTVGVVTK 137 (502)
Q Consensus 92 i~~~~~~~~~~~~~ag~gggt----------gtg~~p~ia~~a~~~~~~~~~~v~~ 137 (502)
+.+++++.|.||-+||+-.-. ..+.+-.+++.|++.|+--+-+++.
T Consensus 71 l~~~~~~~d~Vih~Aa~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~~~~~~i~~Ss 126 (342)
T 2x4g_A 71 LERALRGLDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGS 126 (342)
T ss_dssp HHHHTTTCSEEEEC------------CHHHHHHHHHHHHHHHHHHHTCSCEEEECC
T ss_pred HHHHHHCCCEEEECCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECC
T ss_conf 99998389899964444110011078999987889999999998659872352121
No 268
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=32.55 E-value=18 Score=13.81 Aligned_cols=87 Identities=9% Similarity=0.153 Sum_probs=51.0
Q ss_pred CCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECC--CHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 86179999668147999999985899844999825--5788551899704851554255678888838999999972999
Q gi|254781176|r 14 KPRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANT--DAQALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAEECIDE 91 (502)
Q Consensus 14 ~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~nt--d~~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~~~~ 91 (502)
.-++.|||=|..+..=+..+++.|-. |..|+-.- +.+.|..... .++ +-+....
T Consensus 12 ~~~vlvvGgG~vA~rK~~~ll~~ga~-v~via~~~~~~l~~l~~~~~-i~~-~~~~~~~--------------------- 67 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLEAGAR-LTVNALTFIPQFTVWANEGM-LTL-VEGPFDE--------------------- 67 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTBE-EEEEESSCCHHHHHHHTTTS-CEE-EESSCCG---------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCE-EEEECCCCCHHHHHHHHCCC-EEE-EECCCCH---------------------
T ss_conf 98399989989999999999878987-99993899989999987798-699-9078997---------------------
Q ss_pred HHHHHCCCCEEEEEECCCCCCCCC-HHHHHHHHHHHCCCEEE
Q ss_conf 999726998999980367666740-78999999986498499
Q gi|254781176|r 92 ITEMLDKTHMCFVTAGMGGGTGTG-AAPIIAKIARNKGVLTV 132 (502)
Q Consensus 92 i~~~~~~~~~~~~~ag~gggtgtg-~~p~ia~~a~~~~~~~~ 132 (502)
..|+++++||+. |+-- .--.|++.|+++|+|+-
T Consensus 68 --~dl~~~~lvi~a------t~d~~~n~~i~~~a~~~~~lvN 101 (457)
T 1pjq_A 68 --TLLDSCWLAIAA------TDDDTVNQRVSDAAESRRIFCN 101 (457)
T ss_dssp --GGGTTCSEEEEC------CSCHHHHHHHHHHHHHTTCEEE
T ss_pred --HHHCCCEEEEEC------CCCHHHHHHHHHHHHHCCCEEE
T ss_conf --895894399985------7999999999999998598899
No 269
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=32.31 E-value=18 Score=13.79 Aligned_cols=37 Identities=19% Similarity=0.222 Sum_probs=21.8
Q ss_pred EEEEEEECCCHHHHHHHH--HHCCCCCCEEEEECCCHHH
Q ss_conf 179999668147999999--9858998449998255788
Q gi|254781176|r 16 RITVFGVGGGGGNAVNNM--VSSGLQGVNFVVANTDAQA 52 (502)
Q Consensus 16 ~i~v~g~gg~g~n~~~~~--~~~~~~~~~~~~~ntd~~~ 52 (502)
||.|.|=||+|--++-.- +...-+|-..+.+++|.|+
T Consensus 2 kIav~gKGGvGKTt~a~~lA~~la~~g~~VlliD~D~~~ 40 (254)
T 3kjh_A 2 KLAVAGKGGVGKTTVAAGLIKIMASDYDKIYAVDGDPDS 40 (254)
T ss_dssp EEEEECSSSHHHHHHHHHHHHHHTTTCSCEEEEEECTTS
T ss_pred EEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCC
T ss_conf 899989882279999999999999689968999789996
No 270
>2bmw_A Ferredoxin--NADP reductase; oxidoreductase, flavoprotein, FAD, FNR, reductase reductase, phycobilisome, thylakoid; HET: FAD; 1.5A {Anabaena SP} SCOP: b.43.4.2 c.25.1.1 PDB: 1h42_A* 2vyq_A* 2vzl_A* 1ogi_A* 1ogj_A* 1gjr_A* 1e62_A* 1e64_A* 1quf_A* 1e63_A* 1go2_A* 1w34_A* 1b2r_A* 1w35_A* 1w87_A* 1que_A* 1ewy_A* 1gr1_A* 2bsa_A* 1bqe_A* ...
Probab=32.06 E-value=18 Score=13.76 Aligned_cols=20 Identities=20% Similarity=0.434 Sum_probs=13.9
Q ss_pred CCEEEEEECCCCCCCCCHHHHHHHHH
Q ss_conf 98999980367666740789999999
Q gi|254781176|r 99 THMCFVTAGMGGGTGTGAAPIIAKIA 124 (502)
Q Consensus 99 ~~~~~~~ag~gggtgtg~~p~ia~~a 124 (502)
.++||| ++|||.||..+=+-
T Consensus 149 ~~~vlI------agGtGIaP~~s~l~ 168 (304)
T 2bmw_A 149 ANVIML------AGGTGITPMRTYLW 168 (304)
T ss_dssp CEEEEE------EEGGGHHHHHHHHH
T ss_pred CCEEEE------ECCCCCCHHHHHHH
T ss_conf 868999------66777647999999
No 271
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=32.04 E-value=18 Score=13.76 Aligned_cols=119 Identities=22% Similarity=0.264 Sum_probs=66.5
Q ss_pred HHHC-CCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCC-------HHHHHHCCCCEEEEECCCCCCCCCCC------
Q ss_conf 4543-861799996681479999999858998449998255-------78855189970485155425567888------
Q gi|254781176|r 10 ITEL-KPRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTD-------AQALMMSKAKQIIQLGSGITEGLGAG------ 75 (502)
Q Consensus 10 ~~~~-~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd-------~~~l~~~~~~~~~~~g~~~~~g~g~g------ 75 (502)
+.++ .-||.|+|+||.|-.+...|.+.| ..+++++.. .+.|...- .++.+|......+..+
T Consensus 4 ~~~~~~k~v~iiG~g~sG~s~a~~l~~~G---~~v~~~d~~~~~~~~~~~~l~~~G--~~~~~~~~~~~~~~~~~~~vv~ 78 (451)
T 3lk7_A 4 ITTFENKKVLVLGLARSGEAAARLLAKLG---AIVTVNDGKPFDENPTAQSLLEEG--IKVVCGSHPLELLDEDFCYMIK 78 (451)
T ss_dssp CCTTTTCEEEEECCTTTHHHHHHHHHHTT---CEEEEEESSCGGGCHHHHHHHHTT--CEEEESCCCGGGGGSCEEEEEE
T ss_pred CCCCCCCEEEEEEECHHHHHHHHHHHHCC---CEEEEEECCCCCCCHHHHHHHHCC--CEEEECCCHHHCCCCCCCEEEE
T ss_conf 64568998999977899999999999788---979999798788997899999789--9899688978817799859998
Q ss_pred ------CCHHHHHHHHH----HHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEE
Q ss_conf ------88389999999----72999999726998999980367666740789999999864984999950
Q gi|254781176|r 76 ------SHPEVGRAAAE----ECIDEITEMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVT 136 (502)
Q Consensus 76 ------~~~~~g~~~a~----~~~~~i~~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~ 136 (502)
.+|++-+.... -+..++...+.... ++-++|--|.|-| +-.++.+.+..|.-+-...+
T Consensus 79 Sp~I~~~~p~l~~a~~~~i~~~~~~~l~~~~~~~~-vIgVTGT~GKTTt--~~~l~~iL~~~~~~~~~~~~ 146 (451)
T 3lk7_A 79 NPGIPYNNPMVKKALEKQIPVLTEVELAYLVSESQ-LIGITGSNGKTTT--TTMIAEVLNAGGQRGLLAGN 146 (451)
T ss_dssp CTTSCTTSHHHHHHHHTTCCEECHHHHHHHHCCSE-EEEEECSSCHHHH--HHHHHHHHHHTTCCEEEEET
T ss_pred CCCCCCCCHHHHHHHHCCCCEEEHHHHHHHHHHCC-EEEEECCCCCCHH--HHHHHHHHHHCCCCCEECCC
T ss_conf 99749999999999977997960999999874086-8999777786218--99999998643344123046
No 272
>2grj_A Dephospho-COA kinase; TM1387, EC 2.7.1.24, dephosphocoenzyme A kinase, structural genomics, joint center for structural genomics, JCSG; HET: ADP COD; 2.60A {Thermotoga maritima}
Probab=31.97 E-value=18 Score=13.75 Aligned_cols=28 Identities=25% Similarity=0.449 Sum_probs=22.0
Q ss_pred ECCCCCCCCCHHHHHHHHHHHCCCEEEE
Q ss_conf 0367666740789999999864984999
Q gi|254781176|r 106 AGMGGGTGTGAAPIIAKIARNKGVLTVG 133 (502)
Q Consensus 106 ag~gggtgtg~~p~ia~~a~~~~~~~~~ 133 (502)
-|+-||.|+|=+-|-.-++.++|+.++.
T Consensus 15 IgiTG~igSGKStv~~~l~~~~g~~vid 42 (192)
T 2grj_A 15 IGVTGKIGTGKSTVCEILKNKYGAHVVN 42 (192)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHCCEEEE
T ss_pred EEEECCCCCCHHHHHHHHHHHCCCEEEE
T ss_conf 9987898788999999998853998997
No 273
>1ddg_A Sulfite reductase (NADPH) flavoprotein alpha- component; cytochrome P450 reductase, FNR, modular protein, oxidoreductase; HET: FAD; 2.01A {Escherichia coli} SCOP: b.43.4.1 c.25.1.4 PDB: 1ddi_A*
Probab=31.95 E-value=14 Score=14.55 Aligned_cols=20 Identities=15% Similarity=0.223 Sum_probs=12.0
Q ss_pred CCCCCCCCHHHHHHHHCCCC
Q ss_conf 66555589878787641586
Q gi|254781176|r 206 KEGLINLDFADVRSVMRNMG 225 (502)
Q Consensus 206 ~~g~in~df~d~~~v~~~~g 225 (502)
.-..+.+.+..+-.++...-
T Consensus 140 ~f~~~~~pl~~ll~~lp~l~ 159 (374)
T 1ddg_A 140 RFSPAQLDAEALINLLRPLT 159 (374)
T ss_dssp HHSCCCCCHHHHHHHSCBCC
T ss_pred HHHCCCCCHHHHHHHCCCCC
T ss_conf 63324899899997478888
No 274
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=31.90 E-value=16 Score=14.09 Aligned_cols=39 Identities=26% Similarity=0.407 Sum_probs=28.3
Q ss_pred CCCCHHHCCCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCC
Q ss_conf 57884543861799996681479999999858998449998255
Q gi|254781176|r 6 ANMDITELKPRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTD 49 (502)
Q Consensus 6 ~~~~~~~~~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd 49 (502)
+|+.++ .=||-|||.|-.|+..--++.+.|.+ |.+ .|-+
T Consensus 13 ~~~~~~--~MKIgIIG~G~mG~~lA~~L~~~G~~-V~v--~~r~ 51 (209)
T 2raf_A 13 ENLYFQ--GMEITIFGKGNMGQAIGHNFEIAGHE-VTY--YGSK 51 (209)
T ss_dssp ---------CEEEEECCSHHHHHHHHHHHHTTCE-EEE--ECTT
T ss_pred HHCCCC--CCEEEEECCHHHHHHHHHHHHHCCCE-EEE--ECCC
T ss_conf 206637--88899988439999999999977996-899--4274
No 275
>1ja1_A NADPH-cytochrome P450 reductase; oxidoreductase; HET: FAD FMN NAP EPE; 1.80A {Rattus norvegicus} SCOP: b.43.4.1 c.23.5.2 c.25.1.4 PDB: 1ja0_A* 1j9z_A* 3es9_A* 1amo_A* 3fjo_A* 1b1c_A*
Probab=31.90 E-value=14 Score=14.54 Aligned_cols=14 Identities=0% Similarity=-0.251 Sum_probs=5.7
Q ss_pred HHHHHHHHHHHHHH
Q ss_conf 79999998888876
Q gi|254781176|r 190 DQVLYSGVSCITDL 203 (502)
Q Consensus 190 d~~l~~~v~~i~~~ 203 (502)
+.|+.+-.+.+.+.
T Consensus 161 ~~W~~~l~~~l~~~ 174 (622)
T 1ja1_A 161 ITWREQFWPAVCEF 174 (622)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
T ss_conf 99999999999997
No 276
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=31.70 E-value=19 Score=13.72 Aligned_cols=158 Identities=16% Similarity=0.160 Sum_probs=65.1
Q ss_pred CCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH----HHH
Q ss_conf 6998999980367666740789999999864984999950430004067888899999999986333545027----888
Q gi|254781176|r 97 DKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPFHFEGSRRMRVAESGIEALQETVDTLIVIPN----QNL 172 (502)
Q Consensus 97 ~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf~~eg~~r~~~a~~~~~~l~~~~d~~i~i~n----~~l 172 (502)
+..+-|.|. |- |+.|. ..+.+|+.+|+-.+.++..- +.|...|++ .-+|.+|--.+ +.+
T Consensus 212 ~~g~~VlI~-Ga-G~vG~----~a~~~a~~~G~~~v~v~~~~-----~~r~~~~~~------~Ga~~~i~~~~~~~~~~i 274 (404)
T 3ip1_A 212 RPGDNVVIL-GG-GPIGL----AAVAILKHAGASKVILSEPS-----EVRRNLAKE------LGADHVIDPTKENFVEAV 274 (404)
T ss_dssp CTTCEEEEE-CC-SHHHH----HHHHHHHHTTCSEEEEECSC-----HHHHHHHHH------HTCSEEECTTTSCHHHHH
T ss_pred CCCCEEEEE-CC-CHHHH----HHHHHHHHHCCCEEEEECCH-----HHHHHHHHH------HCCEEEEECCCCCHHHHH
T ss_conf 998999998-98-87999----99999998189739996655-----889999996------298079757875389999
Q ss_pred HHHCCC--------CCHHHHHHHHHHHHHHHHHHHHHHHHHCCC----CCCCCHHHHHHHHCCCCEEEEEEEECCCCCHH
Q ss_conf 741366--------531899974467999999888887651665----55589878787641586589987614862048
Q gi|254781176|r 173 FRIAND--------KTTFADAFSMADQVLYSGVSCITDLMIKEG----LINLDFADVRSVMRNMGRAMMGTGEASGHGRG 240 (502)
Q Consensus 173 ~~~~~~--------~~~~~~af~~~d~~l~~~v~~i~~~i~~~g----~in~df~d~~~v~~~~g~a~~g~g~~~g~~r~ 240 (502)
.++.+. -.+-..++..+-..+....+|+.-.+...| .+.+|+..+. . .+..++|.......+--
T Consensus 275 ~~~t~g~g~D~viD~vG~~~~~~~~l~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~---~-~~~~i~gs~~~~~~~~~ 350 (404)
T 3ip1_A 275 LDYTNGLGAKLFLEATGVPQLVWPQIEEVIWRARGINATVAIVARADAKIPLTGEVFQ---V-RRAQIVGSQGHSGHGTF 350 (404)
T ss_dssp HHHTTTCCCSEEEECSSCHHHHHHHHHHHHHHCSCCCCEEEECSCCCSCEEECHHHHH---H-TTCEEEECCCCCSTTHH
T ss_pred HHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCHHHHH---H-CCEEEEEEECCCCHHHH
T ss_conf 9984899851999906967899999999986267763320142167876654889985---4-51599998467849999
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 999988752701000224555378999616888899999999999997
Q gi|254781176|r 241 IQAAEAAVANPLLDEASMKGSQGLLISITGGSDLTLFEVDEAATRIRE 288 (502)
Q Consensus 241 ~~a~~~a~~~pll~~~~~~~a~~~l~~i~~~~~~~l~e~~~~~~~i~~ 288 (502)
.++++. +.+-| +++ .+ |+ .-+.|.++.+|.+.+++
T Consensus 351 ~~~~~l-~~~gl----~l~---~~---it--~~~~L~~i~~A~~~l~~ 385 (404)
T 3ip1_A 351 PRVISL-MASGM----DMT---KI---IS--KTVSMEEIPEYIKRLQT 385 (404)
T ss_dssp HHHHHH-HHTTC----CGG---GG---CC--EEECGGGHHHHHHHTTT
T ss_pred HHHHHH-HHCCC----CCC---CC---EE--EEEEHHHHHHHHHHHHC
T ss_conf 999999-98799----987---64---13--79879999999999967
No 277
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=31.67 E-value=19 Score=13.71 Aligned_cols=27 Identities=15% Similarity=0.087 Sum_probs=13.6
Q ss_pred CCEEEEEECCCCCCCCCHHHHHH--HHHHHCCCEE
Q ss_conf 98999980367666740789999--9998649849
Q gi|254781176|r 99 THMCFVTAGMGGGTGTGAAPIIA--KIARNKGVLT 131 (502)
Q Consensus 99 ~~~~~~~ag~gggtgtg~~p~ia--~~a~~~~~~~ 131 (502)
.++|||. .|||.||+++ +..++.|-.+
T Consensus 19 ~~vvlIa------gG~GiaP~~si~~~l~~~~~~~ 47 (142)
T 3lyu_A 19 GKILAIG------AYTGIVEVYPIAKAWQEIGNDV 47 (142)
T ss_dssp SEEEEEE------ETTHHHHHHHHHHHHHHTTCEE
T ss_pred CEEEEEE------ECEEHHHHHHHHHHHHHCCCEE
T ss_conf 7699999------1354547899999999769969
No 278
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=31.43 E-value=19 Score=13.69 Aligned_cols=96 Identities=20% Similarity=0.222 Sum_probs=56.5
Q ss_pred CEEEEEEECCCHHHHHHHHHHCCCCCCEEEE-ECCCHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 6179999668147999999985899844999-825578855189970485155425567888883899999997299999
Q gi|254781176|r 15 PRITVFGVGGGGGNAVNNMVSSGLQGVNFVV-ANTDAQALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAEECIDEIT 93 (502)
Q Consensus 15 ~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~-~ntd~~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~~~~i~ 93 (502)
-||.|||.|.-|-.-+..+. ....++++++ ++.+...+........ +....+ ..+.
T Consensus 3 irv~iiG~G~~g~~h~~~~~-~~~~~~~l~~v~d~~~~~~~~~~~~~~--~~~~~~--------------------~~~~ 59 (344)
T 3mz0_A 3 LRIGVIGTGAIGKEHINRIT-NKLSGAEIVAVTDVNQEAAQKVVEQYQ--LNATVY--------------------PNDD 59 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHH-HTCSSEEEEEEECSSHHHHHHHHHHTT--CCCEEE--------------------SSHH
T ss_pred EEEEEECCHHHHHHHHHHHH-HCCCCCEEEEEECCCHHHHHHHHHHHC--CCCCEE--------------------CCHH
T ss_conf 04999998299999999998-428996899998999999999999858--998067--------------------9999
Q ss_pred HHH--CCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCC
Q ss_conf 972--699899998036766674078999999986498499995043000
Q gi|254781176|r 94 EML--DKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPFHF 141 (502)
Q Consensus 94 ~~~--~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf~~ 141 (502)
++| ...|.|+|. |-+-.-.-+++.|-+.|.- .++-+|+..
T Consensus 60 ~ll~~~~~D~V~i~------tp~~~H~~~~~~al~~gkh--v~~EKP~a~ 101 (344)
T 3mz0_A 60 SLLADENVDAVLVT------SWGPAHESSVLKAIKAQKY--VFCEKPLAT 101 (344)
T ss_dssp HHHHCTTCCEEEEC------SCGGGHHHHHHHHHHTTCE--EEECSCSCS
T ss_pred HHHCCCCCCEEEEC------CCCCCHHHHHHHHHHCCCC--EEECCCCCC
T ss_conf 99559998889962------6521159999999854997--264687421
No 279
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=31.26 E-value=19 Score=13.67 Aligned_cols=40 Identities=20% Similarity=0.270 Sum_probs=28.8
Q ss_pred CCHHH-C-CC-EEEEEEE----CCCHHHHHHHHHHCCCCCCEEEEECC
Q ss_conf 88454-3-86-1799996----68147999999985899844999825
Q gi|254781176|r 8 MDITE-L-KP-RITVFGV----GGGGGNAVNNMVSSGLQGVNFVVANT 48 (502)
Q Consensus 8 ~~~~~-~-~~-~i~v~g~----gg~g~n~~~~~~~~~~~~~~~~~~nt 48 (502)
-+|+. | .| +|.|||. |-.|+-++.+|.+.|.+ +..+-.|.
T Consensus 4 ~~i~~~L~~pksIAVVGaS~~~~k~g~~v~~~L~~~g~~-~~~v~p~~ 50 (145)
T 2duw_A 4 NDIAGILTSTRTIALVGASDKPDRPSYRVMKYLLDQGYH-VIPVSPKV 50 (145)
T ss_dssp CSHHHHHHHCCCEEEESCCSCTTSHHHHHHHHHHHHTCC-EEEECSSS
T ss_pred HHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHCCCC-EEEECCCC
T ss_conf 899999867895999820599998399999999967994-48878875
No 280
>1epu_A S-SEC1; parallel beta-sheets, LEFT-hand turn connection, helical bundle, endocytosis/exocytosis complex; 2.40A {Loligo pealei} SCOP: e.25.1.1 PDB: 1fvf_A 1fvh_A
Probab=31.24 E-value=19 Score=13.66 Aligned_cols=12 Identities=17% Similarity=0.279 Sum_probs=5.7
Q ss_pred HHHHHHHHHHHC
Q ss_conf 972999999726
Q gi|254781176|r 86 EECIDEITEMLD 97 (502)
Q Consensus 86 ~~~~~~i~~~~~ 97 (502)
.++.+.|.+-++
T Consensus 78 ~~ni~~l~~d~~ 89 (591)
T 1epu_A 78 EESVKCLMADFQ 89 (591)
T ss_dssp HHHHHHHHHHTS
T ss_pred HHHHHHHHHHHH
T ss_conf 999999999853
No 281
>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*
Probab=31.08 E-value=19 Score=13.65 Aligned_cols=104 Identities=16% Similarity=0.149 Sum_probs=57.6
Q ss_pred EEEEEEECC-CHHHHHHHHHHCCCC--CC-EEEEEC-----CCHHHHHHCCCCEEEEECC-CCCCCCCCCCCHHHHHHHH
Q ss_conf 179999668-147999999985899--84-499982-----5578855189970485155-4255678888838999999
Q gi|254781176|r 16 RITVFGVGG-GGGNAVNNMVSSGLQ--GV-NFVVAN-----TDAQALMMSKAKQIIQLGS-GITEGLGAGSHPEVGRAAA 85 (502)
Q Consensus 16 ~i~v~g~gg-~g~n~~~~~~~~~~~--~~-~~~~~n-----td~~~l~~~~~~~~~~~g~-~~~~g~g~g~~~~~g~~~a 85 (502)
||.|.|..| -|.+.+.++.+.|.. +. +.+.++ .....+.......++.+=. .+ .|
T Consensus 2 KILITG~tGfIG~~l~~~Ll~~g~~v~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Di-------~d-------- 66 (337)
T 1r6d_A 2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDI-------RD-------- 66 (337)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCT-------TC--------
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHCCCCCEEEEEEEC-------CC--------
T ss_conf 599988887899999999997799766776599996787444576665530378759998023-------46--------
Q ss_pred HHHHHHHHHHHCCCCEEEEEECCCCCCCCC------------HHHHHHHHHHHCCCEEEEEEEC
Q ss_conf 972999999726998999980367666740------------7899999998649849999504
Q gi|254781176|r 86 EECIDEITEMLDKTHMCFVTAGMGGGTGTG------------AAPIIAKIARNKGVLTVGVVTK 137 (502)
Q Consensus 86 ~~~~~~i~~~~~~~~~~~~~ag~gggtgtg------------~~p~ia~~a~~~~~~~~~~v~~ 137 (502)
.+.+.....+.|.|+.+|+..+...+. .+--+.+.|++.++-.+-+++.
T Consensus 67 ---~~~~~~~~~~~d~V~h~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~a~~~~vk~~I~~SS 127 (337)
T 1r6d_A 67 ---AGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVST 127 (337)
T ss_dssp ---HHHHHHHTTTCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred ---HHHHHCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC
T ss_conf ---3540002256535897223244432122489999977889999999999859987999455
No 282
>3ie7_A LIN2199 protein; phosphofructokinases, ATP, transferase, glycerol, Mg+2 ION, PSI-II, NYSGXRC, kinase, structural genomics; HET: ATP; 1.60A {Listeria innocua} PDB: 3hic_A* 3jul_A*
Probab=30.86 E-value=19 Score=13.62 Aligned_cols=115 Identities=16% Similarity=0.179 Sum_probs=69.3
Q ss_pred EEEEEEECCCHHHHHHHHHHCCCCCCEEE-EECCC-----HHHHHHCCCCEEE--EECCC--------------CCCCCC
Q ss_conf 17999966814799999998589984499-98255-----7885518997048--51554--------------255678
Q gi|254781176|r 16 RITVFGVGGGGGNAVNNMVSSGLQGVNFV-VANTD-----AQALMMSKAKQII--QLGSG--------------ITEGLG 73 (502)
Q Consensus 16 ~i~v~g~gg~g~n~~~~~~~~~~~~~~~~-~~ntd-----~~~l~~~~~~~~~--~~g~~--------------~~~g~g 73 (502)
+=...-.||+|.|+--.+-+.|.. +.|+ ++..| .+.|....++... ..+.. .+.-..
T Consensus 32 ~~~~~~~GG~~~NvA~~l~~LG~~-~~~ig~vG~D~g~~i~~~L~~~GI~~~~i~~~~~~t~~~~~~~~~~~~~~~~~~~ 110 (320)
T 3ie7_A 32 IKTEFDCGGKGLHVSGVLSKFGIK-NEALGIAGSDNLDKLYAILKEKHINHDFLVEAGTSTRECFVVLSDDTNGSTMIPE 110 (320)
T ss_dssp SEEEEEEESHHHHHHHHHHHHTCC-EEEEEEEESTTHHHHHHHHHHTTCCBCCEEETTCCCEEEEEEEETTCSCCEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHCCCC-EEEEEEECCCHHHHHHHHHHHCCCCCCEEECCCCCCEEEEEEEECCCCCEEEEEC
T ss_conf 857871297799999999987998-7999992180499999988765987310251599970389999679882589834
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEE
Q ss_conf 888838999999972999999726998999980367666740789999999864984999
Q gi|254781176|r 74 AGSHPEVGRAAAEECIDEITEMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVG 133 (502)
Q Consensus 74 ~g~~~~~g~~~a~~~~~~i~~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~ 133 (502)
+| |.+.....+...+.+...+..++++++..-+-.+...-...-+++.+++.++.++.
T Consensus 111 ~~--~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 168 (320)
T 3ie7_A 111 AG--FTVSQTNKDNLLKQIAKKVKKEDMVVIAGSPPPHYTLSDFKELLRTVKATGAFLGC 168 (320)
T ss_dssp CC--CCCCHHHHHHHHHHHHHHCCTTCEEEEESCCCTTCCHHHHHHHHHHHHHHTCEEEE
T ss_pred CC--CCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEE
T ss_conf 77--65798999999999887633576799944677777899999999976532976971
No 283
>1dxe_A 2-dehydro-3-deoxy-galactarate aldolase; class II aldolase; 1.8A {Escherichia coli} SCOP: c.1.12.5 PDB: 1dxf_A
Probab=30.70 E-value=19 Score=13.60 Aligned_cols=66 Identities=17% Similarity=0.225 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC----CCCCCHHHHHHHHCCCCEEEEEEEE
Q ss_conf 6333545027888741366531899974467999999888887651665----5558987878764158658998761
Q gi|254781176|r 160 TVDTLIVIPNQNLFRIANDKTTFADAFSMADQVLYSGVSCITDLMIKEG----LINLDFADVRSVMRNMGRAMMGTGE 233 (502)
Q Consensus 160 ~~d~~i~i~n~~l~~~~~~~~~~~~af~~~d~~l~~~v~~i~~~i~~~g----~in~df~d~~~v~~~~g~a~~g~g~ 233 (502)
-+|.+.+=|+|-=..+--+. ...+.-+..+++-|.+...+.| .+-.+-.|++..+ +.|..++.+|.
T Consensus 169 GvD~i~iGp~DLs~slG~~g-------~~~~p~v~~ai~~v~~~~~~~gk~~G~~~~~~~~~~~~~-~~G~~~i~~g~ 238 (256)
T 1dxe_A 169 GVDGIFVGPSDLAAALGHLG-------NASHPDVQKAIQHIFNRASAHGKPSGILAPVEADARRYL-EWGATFVAVGS 238 (256)
T ss_dssp TCCEEEECHHHHHHHTTCTT-------CTTSHHHHHHHHHHHHHHHHTTCCEEEECCSHHHHHHHH-HTTCCEEEEEE
T ss_pred CCCEEEECHHHHHHHCCCCC-------CCCCHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHH-HHCCCEEEEHH
T ss_conf 98525677488987428888-------989879999999999999985998688279999999999-81999999579
No 284
>2qgz_A Helicase loader, putative primosome component; structural genomics, PSI-2, protein structure initiative; 2.40A {Streptococcus pyogenes serotype M3}
Probab=30.54 E-value=19 Score=13.58 Aligned_cols=58 Identities=17% Similarity=0.194 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHHHHHCC--CCEEEEEECCCCCCCCCHHHHHHHHHHHC---CCEEEEEEECCCCCC
Q ss_conf 999999729999997269--98999980367666740789999999864---984999950430004
Q gi|254781176|r 81 GRAAAEECIDEITEMLDK--THMCFVTAGMGGGTGTGAAPIIAKIARNK---GVLTVGVVTKPFHFE 142 (502)
Q Consensus 81 g~~~a~~~~~~i~~~~~~--~~~~~~~ag~gggtgtg~~p~ia~~a~~~---~~~~~~~v~~pf~~e 142 (502)
.+..|.+....+.+.+.. ..=+|+ -|++|||-+...+-+|+++ .-.+|.+++.|--+.
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~gl~l----~G~~G~GKT~L~~ai~~~l~~~~~~~v~~~~~~~l~~ 194 (308)
T 2qgz_A 132 SRMEAFSAILDFVEQYPSAEQKGLYL----YGDMGIGKSYLLAAMAHELSEKKGVSTTLLHFPSFAI 194 (308)
T ss_dssp HHHHHHHHHHHHHHHCSCSSCCEEEE----ECSTTSSHHHHHHHHHHHHHHHSCCCEEEEEHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCCCCEEEE----ECCCCCCHHHHHHHHHHHHHHCCCCEEEEEEHHHHHH
T ss_conf 99999999999998475467882899----8999985899999999999875797189985359999
No 285
>2pan_A Glyoxylate carboligase; thiamin-diphosphate (THDP), thimain-dependent enzymes, FAD, enzyme, lyase; HET: FAD TDP 1PE; 2.70A {Escherichia coli}
Probab=30.54 E-value=6.6 Score=17.04 Aligned_cols=27 Identities=33% Similarity=0.548 Sum_probs=12.0
Q ss_pred EEEEECCCHHHHH-HHHHHCCCCCCEEEEE
Q ss_conf 9999668147999-9999858998449998
Q gi|254781176|r 18 TVFGVGGGGGNAV-NNMVSSGLQGVNFVVA 46 (502)
Q Consensus 18 ~v~g~gg~g~n~~-~~~~~~~~~~~~~~~~ 46 (502)
+||||-|..+.-+ +.+.+. .+++||.+
T Consensus 44 ~vFg~pG~~~~~l~~al~~~--~~i~~v~~ 71 (616)
T 2pan_A 44 TAFGVPGAAINPFYSAMRKH--GGIRHILA 71 (616)
T ss_dssp EEEECCCGGGHHHHHHHHHH--CCCEEEEC
T ss_pred EEEEECCCCHHHHHHHHHHC--CCCEEEEE
T ss_conf 99990795669999999864--99879905
No 286
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics; 2.01A {Thermus thermophilus HB8}
Probab=30.52 E-value=19 Score=13.58 Aligned_cols=102 Identities=12% Similarity=0.117 Sum_probs=55.3
Q ss_pred CCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 86179999668147999999985899844999825578855189970485155425567888883899999997299999
Q gi|254781176|r 14 KPRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDAQALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAEECIDEIT 93 (502)
Q Consensus 14 ~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~~~~i~ 93 (502)
|.||.|+|--|.-+--+=+++... ..+++..+- +...+-++|.-.. +.+. ++.++ + ..+ .
T Consensus 4 K~~VaIvGATG~vG~ell~lL~~h-P~~el~~la------S~rsaGk~i~~~~---~~l~--~~~~~-~---~~~----~ 63 (345)
T 2ozp_A 4 KKTLSIVGASGYAGGEFLRLALSH-PYLEVKQVT------SRRFAGEPVHFVH---PNLR--GRTNL-K---FVP----P 63 (345)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTC-TTEEEEEEB------CSTTTTSBGGGTC---GGGT--TTCCC-B---CBC----G
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC-CCCEEEEEE------CCCCCCCCHHHHC---CCCC--CCCCC-E---ECC----H
T ss_conf 988999891519999999999819-996799998------2687998488959---3435--86663-2---158----6
Q ss_pred HHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCC
Q ss_conf 9726998999980367666740789999999864984999950430004
Q gi|254781176|r 94 EMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPFHFE 142 (502)
Q Consensus 94 ~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf~~e 142 (502)
+.+++.|+||..+ |.+.+--++..+.+.|+.+|-- +--|.+.
T Consensus 64 ~~~~~~Divf~al------p~~~S~~~~~~~~~~g~~VID~-Ss~fR~~ 105 (345)
T 2ozp_A 64 EKLEPADILVLAL------PHGVFAREFDRYSALAPVLVDL-SADFRLK 105 (345)
T ss_dssp GGCCCCSEEEECC------CTTHHHHTHHHHHTTCSEEEEC-SSTTSCS
T ss_pred HHCCCCCEEEECC------CCCHHHEECHHHHCCCCEEEEC-CCCEECC
T ss_conf 6813477899915------8970001113143258578617-8662505
No 287
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative; 2.00A {Streptococcus agalactiae serogroup V}
Probab=30.17 E-value=20 Score=13.54 Aligned_cols=95 Identities=19% Similarity=0.147 Sum_probs=58.3
Q ss_pred CCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEE-CCCHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 861799996681479999999858998449998-2557885518997048515542556788888389999999729999
Q gi|254781176|r 14 KPRITVFGVGGGGGNAVNNMVSSGLQGVNFVVA-NTDAQALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAEECIDEI 92 (502)
Q Consensus 14 ~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~-ntd~~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~~~~i 92 (502)
|.|+-|||.|..|..-+..+.. ..+++++++ +.|...+..... + .|.. + +- +.+
T Consensus 5 kik~giIG~G~i~~~h~~~l~~--~~~~~v~~v~d~~~~~~~~~a~--~--~~~~--~--------------~~---~~~ 59 (329)
T 3evn_A 5 KVRYGVVSTAKVAPRFIEGVRL--AGNGEVVAVSSRTLESAQAFAN--K--YHLP--K--------------AY---DKL 59 (329)
T ss_dssp CEEEEEEBCCTTHHHHHHHHHH--HCSEEEEEEECSCSSTTCC-----C--CCCS--C--------------EE---SCH
T ss_pred CCEEEEECCHHHHHHHHHHHHH--CCCCEEEEEECCCHHHHHHHHH--H--CCCC--C--------------EE---CCH
T ss_conf 8689999884999999999986--8992899998899999999999--8--5998--0--------------66---899
Q ss_pred HHHHC--CCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCC
Q ss_conf 99726--99899998036766674078999999986498499995043000
Q gi|254781176|r 93 TEMLD--KTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPFHF 141 (502)
Q Consensus 93 ~~~~~--~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf~~ 141 (502)
.++|+ +.|.|||+ |-+..-.-+++.|-+.|.- .++-+|+..
T Consensus 60 ~~ll~~~~~D~V~I~------tp~~~H~~~~~~al~~gk~--vl~EKP~a~ 102 (329)
T 3evn_A 60 EDMLADESIDVIYVA------TINQDHYKVAKAALLAGKH--VLVEKPFTL 102 (329)
T ss_dssp HHHHTCTTCCEEEEC------SCGGGHHHHHHHHHHTTCE--EEEESSCCS
T ss_pred HHHHCCCCCCEEEEC------CCHHHHHHHHHHHHHCCCE--EEEEECCCC
T ss_conf 999628898889905------8266555778999987998--999724545
No 288
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, PSI, protein structure initiative; 2.40A {Salmonella typhimurium LT2}
Probab=30.03 E-value=20 Score=13.52 Aligned_cols=48 Identities=10% Similarity=0.128 Sum_probs=34.4
Q ss_pred CCCCHHHHHHHHHHHHHHHH-HHHHHHHHHCCCCCCCCHHHHHHHHCCCC
Q ss_conf 66531899974467999999-88888765166555589878787641586
Q gi|254781176|r 177 NDKTTFADAFSMADQVLYSG-VSCITDLMIKEGLINLDFADVRSVMRNMG 225 (502)
Q Consensus 177 ~~~~~~~~af~~~d~~l~~~-v~~i~~~i~~~g~in~df~d~~~v~~~~g 225 (502)
++ .+--..+++++..+..+ +.++.+.+..----.||...+..++..+.
T Consensus 163 G~-~G~a~~~Kl~~N~~~~~~~~~~~Ea~~l~~k~Gid~~~~~~~l~~~~ 211 (295)
T 1yb4_A 163 GG-NGDGQTCKVANQIIVALNIEAVSEALVFASKAGADPVRVRQALMGGF 211 (295)
T ss_dssp ES-TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHTSSS
T ss_pred CC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC
T ss_conf 89-67789999999999999999999999999982969999999996235
No 289
>1t3l_A Dihydropyridine-sensitive L-type, calcium channel beta-2 subunit; protein-peptide complex, SH3 domain, guanylate kinase domain; 2.20A {Oryctolagus cuniculus} SCOP: b.34.2.1 c.37.1.1 PDB: 1t3s_A 1vyv_A 1vyu_A 1vyt_A
Probab=29.93 E-value=20 Score=13.51 Aligned_cols=17 Identities=18% Similarity=0.305 Sum_probs=8.2
Q ss_pred HHHHHHHHHCCCCEEEE
Q ss_conf 29999997269989999
Q gi|254781176|r 88 CIDEITEMLDKTHMCFV 104 (502)
Q Consensus 88 ~~~~i~~~~~~~~~~~~ 104 (502)
+.+.|++.++.-.+|++
T Consensus 218 s~~aI~~v~~~gk~ciL 234 (337)
T 1t3l_A 218 EIERIFELARTLQLVVL 234 (337)
T ss_dssp HHHHHHHHTTTCCEEEE
T ss_pred CHHHHHHHHHHCCEEEE
T ss_conf 39999999972886899
No 290
>3hdt_A Putative kinase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.79A {Clostridium symbiosum atcc 14940}
Probab=29.88 E-value=20 Score=13.50 Aligned_cols=23 Identities=22% Similarity=0.355 Sum_probs=14.0
Q ss_pred CCCCCCCCCHHHHHHHHHHHCCC
Q ss_conf 36766674078999999986498
Q gi|254781176|r 107 GMGGGTGTGAAPIIAKIARNKGV 129 (502)
Q Consensus 107 g~gggtgtg~~p~ia~~a~~~~~ 129 (502)
+..|+.|||.+.|--.+|+++|.
T Consensus 18 tI~g~~GsGKsTia~~LA~~Lg~ 40 (223)
T 3hdt_A 18 TIEREYGSGGRIVGKKLAEELGI 40 (223)
T ss_dssp EEEECTTSCHHHHHHHHHHHHTC
T ss_pred EECCCCCCCHHHHHHHHHHHHCC
T ss_conf 85799989979999999999498
No 291
>1s1m_A CTP synthase; CTP synthetase, UTP:ammonia ligase (ADP-forming), cytidine 5'-triphosphate synthase, ammonia lyase; 2.30A {Escherichia coli} SCOP: c.23.16.1 c.37.1.10 PDB: 2ad5_A*
Probab=29.44 E-value=20 Score=13.45 Aligned_cols=87 Identities=17% Similarity=0.293 Sum_probs=53.1
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC-CHHHHH---HHHHHHCC---CEEEEEEECCCC-CC
Q ss_conf 67888883899999997299999972699899998036766674-078999---99998649---849999504300-04
Q gi|254781176|r 71 GLGAGSHPEVGRAAAEECIDEITEMLDKTHMCFVTAGMGGGTGT-GAAPII---AKIARNKG---VLTVGVVTKPFH-FE 142 (502)
Q Consensus 71 g~g~g~~~~~g~~~a~~~~~~i~~~~~~~~~~~~~ag~gggtgt-g~~p~i---a~~a~~~~---~~~~~~v~~pf~-~e 142 (502)
|-=-|....+=-.-..|=.+.|++.-.++|+|++ ..||--|- -..|-+ .++..+.| .+-|-+.-.|+- .=
T Consensus 106 G~YlG~TVQvIPHiTdeIk~~i~~~~~~~di~iv--EiGGTVGDIEs~pFlEAiRQ~~~~~g~~n~~~iHvtlvP~l~~~ 183 (545)
T 1s1m_A 106 GDYLGATVQVIPHITNAIKERVLEGGEGHDVVLV--EIGGTVGDIESLPFLEAIRQMAVEIGREHTLFMHLTLVPYMAAS 183 (545)
T ss_dssp TTTTTCCCCHHHHHHHHHHHHHHHHHTTCSEEEE--EECSCTTSSTTHHHHHHHHHHHHHHCTTSEEEEEEEECCEETTT
T ss_pred CCCCCCEEEEECCHHHHHHHHHHCCCCCCCEEEE--EECCEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCC
T ss_conf 6768872687077279999788705778877999--70423200001719999999987608777899976651411443
Q ss_pred CHHHHHHHHHHHHHHHH
Q ss_conf 06788889999999998
Q gi|254781176|r 143 GSRRMRVAESGIEALQE 159 (502)
Q Consensus 143 g~~r~~~a~~~~~~l~~ 159 (502)
|..+.+-.+.++.+|+.
T Consensus 184 gE~KTKPTQhSvk~Lr~ 200 (545)
T 1s1m_A 184 GEVKTKPTQHSVKELLS 200 (545)
T ss_dssp TEECCHHHHHHHHHHHT
T ss_pred CCCCCCCHHHHHHHHHH
T ss_conf 33455430789999996
No 292
>1zzg_A Glucose-6-phosphate isomerase; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.95A {Thermus thermophilus HB8}
Probab=29.27 E-value=20 Score=13.43 Aligned_cols=38 Identities=13% Similarity=0.449 Sum_probs=16.6
Q ss_pred EEEEEEECCC--HHHHHHHHHHCCCCCCEEEEECCCHHHHH
Q ss_conf 1799996681--47999999985899844999825578855
Q gi|254781176|r 16 RITVFGVGGG--GGNAVNNMVSSGLQGVNFVVANTDAQALM 54 (502)
Q Consensus 16 ~i~v~g~gg~--g~n~~~~~~~~~~~~~~~~~~ntd~~~l~ 54 (502)
.|.+||+||. |.-++...+...-..+-|+ -|+|...+.
T Consensus 68 ~vV~iGIGGS~LG~~al~~al~~~~~~~~f~-~n~d~~~~~ 107 (415)
T 1zzg_A 68 DFVLIGIGGSALGPKALEAAFNESGVRFHYL-DHVEPEPIL 107 (415)
T ss_dssp EEEEECCGGGTHHHHHHHHHHCCSCCEEEEE-CSCCHHHHH
T ss_pred EEEEEEEEHHHHHHHHHHHHHHCCCCCEEEE-CCCCHHHHH
T ss_conf 6999966588899999999984679708994-689989999
No 293
>2g4r_A MOGA, molybdopterin biosynthesis MOG protein; anomalous substructure of MOGA, biosynthetic protein; 1.92A {Mycobacterium tuberculosis} PDB: 3oi9_A
Probab=28.82 E-value=21 Score=13.38 Aligned_cols=32 Identities=6% Similarity=0.062 Sum_probs=22.8
Q ss_pred HHHHHCCCCEEEEEECCCCCCCCCHHHHHHHH
Q ss_conf 99972699899998036766674078999999
Q gi|254781176|r 92 ITEMLDKTHMCFVTAGMGGGTGTGAAPIIAKI 123 (502)
Q Consensus 92 i~~~~~~~~~~~~~ag~gggtgtg~~p~ia~~ 123 (502)
++.+.+++|+||.|.|+|-|----..++++++
T Consensus 56 ~~~~~~~~DlVittGG~g~~~~D~t~~a~~~~ 87 (160)
T 2g4r_A 56 HDAVNAGVDVIITSGGTGISPTDTTPEHTVAV 87 (160)
T ss_dssp HHHHHTTCSEEEEESCCSSSTTCCHHHHHHHH
T ss_pred HHHHHCCCCEEEECCCEEECCCCCCHHHHHHH
T ss_conf 99986699999974753507864629999998
No 294
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=28.76 E-value=21 Score=13.37 Aligned_cols=24 Identities=21% Similarity=0.418 Sum_probs=21.9
Q ss_pred EEEEEEECCCHHHHHHHHHHCCCC
Q ss_conf 179999668147999999985899
Q gi|254781176|r 16 RITVFGVGGGGGNAVNNMVSSGLQ 39 (502)
Q Consensus 16 ~i~v~g~gg~g~n~~~~~~~~~~~ 39 (502)
||-+||+|-.|.....++.+.|..
T Consensus 2 kIg~IGlG~MG~~mA~~L~~~G~~ 25 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRGVE 25 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCE
T ss_pred EEEEEEHHHHHHHHHHHHHHCCCE
T ss_conf 799985589999999999988996
No 295
>3hjh_A Transcription-repair-coupling factor; MFD, mutation frequency decline, transcription-coupled DNA repair, ATP-binding, DNA damage, DNA repair; 1.95A {Escherichia coli} PDB: 2b2n_A*
Probab=28.60 E-value=21 Score=13.35 Aligned_cols=162 Identities=18% Similarity=0.238 Sum_probs=78.6
Q ss_pred CCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHCCCCCHHHHHH
Q ss_conf 67666740789999999864984999950430004067888899999999986333-54502788874136653189997
Q gi|254781176|r 108 MGGGTGTGAAPIIAKIARNKGVLTVGVVTKPFHFEGSRRMRVAESGIEALQETVDT-LIVIPNQNLFRIANDKTTFADAF 186 (502)
Q Consensus 108 ~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf~~eg~~r~~~a~~~~~~l~~~~d~-~i~i~n~~l~~~~~~~~~~~~af 186 (502)
+||=+|+..|.++|.++++.+--++-|+ | ....|..=-..|+.+.+- +..+|- -+.+++ +.+
T Consensus 19 ~~gl~gsa~a~~~a~~~~~~~~p~liV~--~-------~~~~A~~l~~dL~~~~~~~v~~~P~-------~e~lpy-e~~ 81 (483)
T 3hjh_A 19 LGELTGAACATLVAEIAERHAGPVVLIA--P-------DMQNALRLHDEISQFTDQMVMNLAD-------WETLPY-DSF 81 (483)
T ss_dssp EECCCTTHHHHHHHHHHHHSSSCEEEEE--S-------SHHHHHHHHHHHHHTCSSCEEECCC-------CCSCTT-CSS
T ss_pred ECCCCCHHHHHHHHHHHHHHCCCEEEEE--C-------CHHHHHHHHHHHHHCCCCCEEECCC-------CCCCCC-CCC
T ss_conf 5587746999999999997589999990--8-------9999999999998526854056675-------445776-667
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEE
Q ss_conf 44679999998888876516655558987878764158658998761486204899998875270100022455537899
Q gi|254781176|r 187 SMADQVLYSGVSCITDLMIKEGLINLDFADVRSVMRNMGRAMMGTGEASGHGRGIQAAEAAVANPLLDEASMKGSQGLLI 266 (502)
Q Consensus 187 ~~~d~~l~~~v~~i~~~i~~~g~in~df~d~~~v~~~~g~a~~g~g~~~g~~r~~~a~~~a~~~pll~~~~~~~a~~~l~ 266 (502)
....+++++=++.+..|..... + + +-+.-.||..++..-..+ +...+
T Consensus 82 ~~~~~~~~~R~~~L~~L~~~~~----------------~--i------------ivtt~~al~~~~~~~~~~---~~~~~ 128 (483)
T 3hjh_A 82 SPHQDIISSRLSTLYQLPTMQR----------------G--V------------LIVPVNTLMQRVCPHSFL---HGHAL 128 (483)
T ss_dssp CCCHHHHHHHHHHHHHGGGCCS----------------S--E------------EEEEHHHHHBCCCCHHHH---HHTCE
T ss_pred CCCHHHHHHHHHHHHHHCCCCC----------------C--C------------EEEEHHHHHCCCCCHHHH---HHCCE
T ss_conf 9856999999999998634899----------------8--5------------696667741889989999---71757
Q ss_pred EEECCCCCCHHHHHHHHHHH-HH---HCC-CCCCEEEEEEEC---CCCCCEEEEEEEEECC
Q ss_conf 96168888999999999999-97---416-886399985313---4657547999985135
Q gi|254781176|r 267 SITGGSDLTLFEVDEAATRI-RE---EVD-SEANIILGATFD---EALEGVIRVSVVATGI 319 (502)
Q Consensus 267 ~i~~~~~~~l~e~~~~~~~i-~~---~~~-~~a~ii~G~~~d---~~~~~~~~v~~iatg~ 319 (502)
.+..|.++.+.++-+-.... ++ .|. +.---+=|-.+| ...+.=+|+-..-.-+
T Consensus 129 ~l~~G~~~~~~~l~~~L~~~GY~r~~~Ve~~GefsvRGgIiDIfp~~~~~PvRIEfFgDeI 189 (483)
T 3hjh_A 129 VMKKGQRLSRDALRTQLDSAGYRHVDQVMEHGEYATRGALLDLFPMGSELPYRLDFFDDEI 189 (483)
T ss_dssp EEETTCCCCHHHHHHHHHHTTCEECSSCCSTTEEEEETTEEEECCBTCSSCEEEEEETTEE
T ss_pred EEECCCEECHHHHHHHHHHHCCCCCCEECCCCEEEEECCEEEECCCCCCCCEEEEEECCHH
T ss_conf 8726989558999999999589553333047569987897587436679638999989714
No 296
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=28.40 E-value=21 Score=13.33 Aligned_cols=62 Identities=21% Similarity=0.257 Sum_probs=35.0
Q ss_pred EEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999803676667407899999998649849999504300040678888999999999863335450
Q gi|254781176|r 102 CFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPFHFEGSRRMRVAESGIEALQETVDTLIVI 167 (502)
Q Consensus 102 ~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf~~eg~~r~~~a~~~~~~l~~~~d~~i~i 167 (502)
+.|.+|-| ++.|-.+--.|+.|++.|+--|. |..||.|-... +...+-.+++.+.+|.-|++
T Consensus 70 ~~vi~gv~-~~s~~~~i~~a~~a~~~Gad~v~-v~pP~~~~~s~--~~l~~~~~~v~~~~~~pi~~ 131 (292)
T 2vc6_A 70 VPVIAGAG-SNSTAEAIAFVRHAQNAGADGVL-IVSPYYNKPTQ--EGIYQHFKAIDAASTIPIIV 131 (292)
T ss_dssp SCBEEECC-CSSHHHHHHHHHHHHHTTCSEEE-EECCCSSCCCH--HHHHHHHHHHHHHCSSCEEE
T ss_pred CCEEEECC-CHHHHHHHHHHHHHHHCCCCEEE-ECCCCCCCCCH--HHHHHHHHHHHHHCCCCEEE
T ss_conf 61897368-43799999999999976999999-87998899899--99999999998305787899
No 297
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=28.34 E-value=21 Score=13.32 Aligned_cols=66 Identities=12% Similarity=0.038 Sum_probs=38.6
Q ss_pred EEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999803676667407899999998649849999504300040-67888899999999986333545027
Q gi|254781176|r 102 CFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPFHFEG-SRRMRVAESGIEALQETVDTLIVIPN 169 (502)
Q Consensus 102 ~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf~~eg-~~r~~~a~~~~~~l~~~~d~~i~i~n 169 (502)
+.+++|- |++.|--+=-.|+.|++.|+--+-+ ..||.+.. +..-..-..-..++.+.+|.=|+|-|
T Consensus 78 ~~vi~gv-~~~s~~~~i~~a~~a~~~G~d~~lv-~pP~y~~~~~~~~~~i~~~~~~ia~~~~lpiiiYn 144 (309)
T 3fkr_A 78 VPVIVTT-SHYSTQVCAARSLRAQQLGAAMVMA-MPPYHGATFRVPEAQIFEFYARVSDAIAIPIMVQD 144 (309)
T ss_dssp SCEEEEC-CCSSHHHHHHHHHHHHHTTCSEEEE-CCSCBTTTBCCCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred CEEEEEC-CCCCHHHHHHHHHHHHHCCCCEEEE-CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEC
T ss_conf 6089967-8786899999999974349987885-48744567788999999999999722488769851
No 298
>1pea_A Amidase operon; gene regulator, receptor, binding protein; 2.10A {Pseudomonas aeruginosa} SCOP: c.93.1.1 PDB: 1qo0_A 1qnl_A
Probab=28.10 E-value=21 Score=13.29 Aligned_cols=49 Identities=16% Similarity=0.192 Sum_probs=35.5
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEE
Q ss_conf 888389999999729999997269989999803676667407899999998649849999
Q gi|254781176|r 75 GSHPEVGRAAAEECIDEITEMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGV 134 (502)
Q Consensus 75 g~~~~~g~~~a~~~~~~i~~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~ 134 (502)
+++|+.+.++|.+-.++ ++.++|| |+.+|+.+..++.++.+.+++.++-
T Consensus 57 ~~~p~~a~~~a~~li~~-----d~V~aii------G~~~S~~~~a~~~~~~~~~vp~i~~ 105 (385)
T 1pea_A 57 GGDPDRYRLCAEDFIRN-----RGVRFLV------GCYMSHTRKAVMPVVERADALLCYP 105 (385)
T ss_dssp TTCHHHHHHHHHHHHHT-----TCCCEEE------ECCSHHHHHHHHHHHHHTTCEEEEC
T ss_pred CCCHHHHHHHHHHHHHH-----CCCEEEE------CCCCHHHHHHHHHHHHHHCCCEEEC
T ss_conf 99999999999999961-----8976999------7885088899999999739726734
No 299
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=27.92 E-value=21 Score=13.27 Aligned_cols=44 Identities=20% Similarity=0.373 Sum_probs=32.1
Q ss_pred CCCCHHHCCCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHC
Q ss_conf 578845438617999966814799999998589984499982557885518
Q gi|254781176|r 6 ANMDITELKPRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDAQALMMS 56 (502)
Q Consensus 6 ~~~~~~~~~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~~~l~~~ 56 (502)
|+++|+ ||.|||-|-.|....-.+...|+ +.+..+.|...|.+.
T Consensus 1 m~m~Ik----~VaViGaG~mG~~IA~~~a~~G~---~V~l~D~~~~~l~~~ 44 (483)
T 3mog_A 1 MSLNVQ----TVAVIGSGTMGAGIAEVAASHGH---QVLLYDISAEALTRA 44 (483)
T ss_dssp ---CCC----CEEEECCSHHHHHHHHHHHHTTC---CEEEECSCHHHHHHH
T ss_pred CCCCCC----EEEEECCCHHHHHHHHHHHHCCC---CEEEEECCHHHHHHH
T ss_conf 997876----89998979899999999995899---689997999999999
No 300
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, biotin enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=27.55 E-value=19 Score=13.55 Aligned_cols=24 Identities=8% Similarity=0.079 Sum_probs=11.9
Q ss_pred HHHHHHHHHHCCCEEEEEEECCCC
Q ss_conf 899999998649849999504300
Q gi|254781176|r 117 APIIAKIARNKGVLTVGVVTKPFH 140 (502)
Q Consensus 117 ~p~ia~~a~~~~~~~~~~v~~pf~ 140 (502)
.-+..+.+++.|....+.+..++.
T Consensus 129 ~~~~i~~~~~~g~~~~~~i~~~~~ 152 (464)
T 2nx9_A 129 MQQALQAVKKMGAHAQGTLCYTTS 152 (464)
T ss_dssp HHHHHHHHHHTTCEEEEEEECCCC
T ss_pred HHHHHHHHHHHCCCCEEEEECCCC
T ss_conf 999999999736752389980568
No 301
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=27.40 E-value=22 Score=13.21 Aligned_cols=75 Identities=21% Similarity=0.221 Sum_probs=44.3
Q ss_pred EEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHCC---CCEEE-------EEC---------CCCCCCCCCCCC
Q ss_conf 79999668147999999985899844999825578855189---97048-------515---------542556788888
Q gi|254781176|r 17 ITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDAQALMMSK---AKQII-------QLG---------SGITEGLGAGSH 77 (502)
Q Consensus 17 i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~~~l~~~~---~~~~~-------~~g---------~~~~~g~g~g~~ 77 (502)
+.|||=|.||+-+-=...+.|++ .+.+.- ....++. +.--| +.+ ..+.++-+=.+|
T Consensus 8 VLVIGsG~AGl~AAi~A~e~G~~---V~vveK--~~~~~g~S~~A~GGi~a~~~~~~~~~~Ds~e~~~~Dt~k~g~~l~d 82 (660)
T 2bs2_A 8 SLVIGGGLAGLRAAVATQQKGLS---TIVLSL--IPVKRSHSAAAQGGMQASLGNSKMSDGDNEDLHFMDTVKGSDWGCD 82 (660)
T ss_dssp EEEECCSHHHHHHHHHHHTTTCC---EEEECS--SCGGGSGGGGCCSCEECCCCCSGGGTTCCHHHHHHHHHHHTTTCSC
T ss_pred EEEECCCHHHHHHHHHHHHCCCC---EEEEEC--CCCCCCHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHCCCCC
T ss_conf 89999649999999999977997---799968--8999983888753460586546679998999999999997678877
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q ss_conf 3899999997299999972
Q gi|254781176|r 78 PEVGRAAAEECIDEITEML 96 (502)
Q Consensus 78 ~~~g~~~a~~~~~~i~~~~ 96 (502)
|++-+.-++++.+.|..+.
T Consensus 83 ~~lv~~l~~~a~~~i~~Le 101 (660)
T 2bs2_A 83 QKVARMFVNTAPKAIRELA 101 (660)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999
No 302
>3gdw_A Sigma-54 interaction domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics; HET: MSE; 2.00A {Enterococcus faecalis V583}
Probab=27.37 E-value=22 Score=13.20 Aligned_cols=45 Identities=9% Similarity=0.035 Sum_probs=33.0
Q ss_pred CCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCH
Q ss_conf 699899998036766674078999999986498499995043000406
Q gi|254781176|r 97 DKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPFHFEGS 144 (502)
Q Consensus 97 ~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf~~eg~ 144 (502)
...+=|+|.+-|||||-...+ .+......+.+|+=+.+|.-.|--
T Consensus 61 ~~~~gvLILtDL~ggtp~n~~---~~~~~~~~v~visG~Nlpmllea~ 105 (139)
T 3gdw_A 61 SLNNGILLLTDMGSLNSFGNM---LFEETGIRTKAITMTSTMIVLEAI 105 (139)
T ss_dssp GGTTCEEEEECSGGGGGHHHH---HHHHHCCCEEEECSCCHHHHHHHH
T ss_pred CCCCCEEEEEECCCCCHHHHH---HHHHHCCCEEEEECCCHHHHHHHH
T ss_conf 889877999857887379999---998618885887067789999999
No 303
>1cfz_A Hydrogenase 2 maturation protease; metzincins, nickel; 2.20A {Escherichia coli} SCOP: c.56.1.1 PDB: 2kml_A
Probab=27.00 E-value=22 Score=13.16 Aligned_cols=61 Identities=23% Similarity=0.238 Sum_probs=41.2
Q ss_pred EEEEEEECC-------CHHHHHHHHHHCC--CCCCEEEEECCCHHHHH--HCCCCEEEEECCCCCCCCCCCCC
Q ss_conf 179999668-------1479999999858--99844999825578855--18997048515542556788888
Q gi|254781176|r 16 RITVFGVGG-------GGGNAVNNMVSSG--LQGVNFVVANTDAQALM--MSKAKQIIQLGSGITEGLGAGSH 77 (502)
Q Consensus 16 ~i~v~g~gg-------~g~n~~~~~~~~~--~~~~~~~~~ntd~~~l~--~~~~~~~~~~g~~~~~g~g~g~~ 77 (502)
||.|+|+|. .|.-++.++.+.. ..+|+++-+.|...+|- ...++..|.+..- ..+...+|.
T Consensus 2 kilVlGiGN~l~gDDgvG~~v~~~L~~~~~~~~~v~v~d~gt~~~~ll~~l~~~~~viiVDA~-~~~~~~pg~ 73 (162)
T 1cfz_A 2 RILVLGVGNILLTDEAIGVRIVEALEQRYILPDYVEILDGGTAGMELLGDMANRDHLIIADAI-VSKKNAPGT 73 (162)
T ss_dssp CEEEEEESCTTBGGGGHHHHHHHHHHHHEECCTTEEEEEEETCCGGGHHHHSSCSEEEEEEEC-CSSCSCTTC
T ss_pred EEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHCCCCEEEEEEEE-ECCCCCCEE
T ss_conf 499999898542617089999999986078999859999998889999997199869999976-337999859
No 304
>3bpd_A Uncharacterized protein; heptamer, Mg+2 ION, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 2.80A {Archaeoglobus fulgidus dsm 4304} SCOP: d.58.61.1
Probab=26.91 E-value=22 Score=13.15 Aligned_cols=24 Identities=29% Similarity=0.675 Sum_probs=13.8
Q ss_pred CCCHHHHHHHHCCCCEEEEEEEEC
Q ss_conf 589878787641586589987614
Q gi|254781176|r 211 NLDFADVRSVMRNMGRAMMGTGEA 234 (502)
Q Consensus 211 n~df~d~~~v~~~~g~a~~g~g~~ 234 (502)
||||.+++.++.+.|.++-.+-+.
T Consensus 59 did~d~I~~~IE~~GgvIHSIDEV 82 (100)
T 3bpd_A 59 NLDYEQIKGVIEDMGGVIHSVDEV 82 (100)
T ss_dssp EECHHHHHHHHHTTTCEEEEEEEE
T ss_pred CCCHHHHHHHHHHCCCEEEEEEEE
T ss_conf 879799999999849827856236
No 305
>3db2_A Putative NADPH-dependent oxidoreductase; ZP_01370612.1, structural genomics, joint center for structural genomics, JCSG; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=26.89 E-value=22 Score=13.14 Aligned_cols=113 Identities=9% Similarity=0.110 Sum_probs=64.5
Q ss_pred CCEEEEEEECCCHHHHHHHHHHCCCCCCEEEE-ECCCHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 86179999668147999999985899844999-82557885518997048515542556788888389999999729999
Q gi|254781176|r 14 KPRITVFGVGGGGGNAVNNMVSSGLQGVNFVV-ANTDAQALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAEECIDEI 92 (502)
Q Consensus 14 ~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~-~ntd~~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~~~~i 92 (502)
+.||-+||.|.-|.+-+..+ ....++++++ ++.|...+...... .|... ..+.+
T Consensus 5 ~lrvgiIG~G~~~~~h~~~~--~~~~~~~v~~v~d~~~~~~~~~~~~----~~~~~-----------------~~~~~-- 59 (354)
T 3db2_A 5 PVGVAAIGLGRWAYVMADAY--TKSEKLKLVTCYSRTEDKREKFGKR----YNCAG-----------------DATME-- 59 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHH--TTCSSEEEEEEECSSHHHHHHHHHH----HTCCC-----------------CSSHH--
T ss_pred CCEEEEECCCHHHHHHHHHH--HHCCCCEEEEEECCCHHHHHHHHHH----HCCCC-----------------CCCHH--
T ss_conf 84499993839999999999--8589948999988999999999998----19983-----------------38999--
Q ss_pred HHHHC--CCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99726--99899998036766674078999999986498499995043000406788889999999998633354
Q gi|254781176|r 93 TEMLD--KTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPFHFEGSRRMRVAESGIEALQETVDTLI 165 (502)
Q Consensus 93 ~~~~~--~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf~~eg~~r~~~a~~~~~~l~~~~d~~i 165 (502)
++|. +.|.|+| .|-+..-+-+++.|-+.|.- .++-+|+..- ...|++= .++.+.....+
T Consensus 60 -~ll~~~~iD~V~i------~tp~~~h~~~~~~al~~gk~--V~~EKP~a~~----~~e~~~l-~~~a~~~~~~~ 120 (354)
T 3db2_A 60 -ALLAREDVEMVII------TVPNDKHAEVIEQCARSGKH--IYVEKPISVS----LDHAQRI-DQVIKETGVKF 120 (354)
T ss_dssp -HHHHCSSCCEEEE------CSCTTSHHHHHHHHHHTTCE--EEEESSSCSS----HHHHHHH-HHHHHHHCCCE
T ss_pred -HHHCCCCCCEEEE------CCCHHHHHHHHHHHHHCCCE--EEEECCCCCC----HHHHHHH-HHHHHHCCCCC
T ss_conf -9956999988998------79778888889999978997--9996686432----3788888-88998607764
No 306
>3cwc_A Putative glycerate kinase 2; structural genomics, center for structural genomics of infectious diseases, csgid, IDP122, transferase; 2.23A {Salmonella typhimurium LT2}
Probab=26.88 E-value=22 Score=13.14 Aligned_cols=25 Identities=16% Similarity=0.187 Sum_probs=10.3
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 3189997446799999988888765
Q gi|254781176|r 180 TTFADAFSMADQVLYSGVSCITDLM 204 (502)
Q Consensus 180 ~~~~~af~~~d~~l~~~v~~i~~~i 204 (502)
.++.+|++.+-+.|....+.|..+|
T Consensus 352 ~~l~~a~~~a~~~L~~~~~~i~r~l 376 (383)
T 3cwc_A 352 CTLEDALKNASENVRMTARNVAATL 376 (383)
T ss_dssp TTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999989999999999999999
No 307
>2gn0_A Threonine dehydratase catabolic; TDCB, biodegradative threonine deaminase, PLP, L-threonine metabolism, alternate conformation lyase; HET: LLP; 1.70A {Salmonella typhimurium} PDB: 2gn1_A* 2gn2_A*
Probab=26.35 E-value=23 Score=13.08 Aligned_cols=18 Identities=33% Similarity=0.257 Sum_probs=9.1
Q ss_pred HHHHHHHCCCCEEEEEEC
Q ss_conf 999997269989999803
Q gi|254781176|r 90 DEITEMLDKTHMCFVTAG 107 (502)
Q Consensus 90 ~~i~~~~~~~~~~~~~ag 107 (502)
.||.+.+...|.+|+..|
T Consensus 180 ~Ei~~q~~~~d~vv~~vG 197 (342)
T 2gn0_A 180 LEIMEDLYDVDNVIVPIG 197 (342)
T ss_dssp HHHHHHCTTCCEEEEECS
T ss_pred HHHHHHHCCCCEEEEEEC
T ss_conf 999997088986999736
No 308
>2o3i_A Hypothetical protein; NESG, CVR68, Q7NTB2, structural genomics, PSI-2, protein structure initiative; 2.30A {Chromobacterium violaceum} SCOP: e.73.1.1
Probab=26.21 E-value=11 Score=15.40 Aligned_cols=38 Identities=21% Similarity=0.242 Sum_probs=23.3
Q ss_pred CCCCCCCHHHHHHHHHHHHHH-------HH----HHHCCCCEEEEEECCC
Q ss_conf 678888838999999972999-------99----9726998999980367
Q gi|254781176|r 71 GLGAGSHPEVGRAAAEECIDE-------IT----EMLDKTHMCFVTAGMG 109 (502)
Q Consensus 71 g~g~g~~~~~g~~~a~~~~~~-------i~----~~~~~~~~~~~~ag~g 109 (502)
|-|-||||..|+..+++-... ++ ..|.+.++| .+++||
T Consensus 21 GtGGGGdp~~~~~l~~~~~~~~~~~~~~V~li~~del~d~~~V-~v~~mG 69 (405)
T 2o3i_A 21 GSGGGGTMISARHLAANFRKGDYYPTDKVRVVDVDEATDGDCV-MVAYMG 69 (405)
T ss_dssp TTTCSCCHHHHHHHHTTCSBTTTBSCSCEEEECGGGCCSSEEE-EEEEEE
T ss_pred EECCCCCHHHHHHHHHHHHHHHCCCCCCEEEECHHHCCCCCEE-EEEEEC
T ss_conf 8578977789999999997753478995599406336998899-996631
No 309
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster}
Probab=26.21 E-value=23 Score=13.06 Aligned_cols=20 Identities=15% Similarity=0.202 Sum_probs=8.0
Q ss_pred CCCCCCH---HHHHHHHHHHCCC
Q ss_conf 6667407---8999999986498
Q gi|254781176|r 110 GGTGTGA---APIIAKIARNKGV 129 (502)
Q Consensus 110 ggtgtg~---~p~ia~~a~~~~~ 129 (502)
|.|.||+ -.-|+++|++.|+
T Consensus 243 GTt~tGaiDpl~~I~~i~~~~~~ 265 (475)
T 3k40_A 243 GTTNSCAFDYLDECGPVGNKHNL 265 (475)
T ss_dssp SCTTTCCBCCHHHHHHHHHHTTC
T ss_pred CCCCCCCHHHHHHHHHHHHHCCC
T ss_conf 87677223029999999987596
No 310
>3llm_A ATP-dependent RNA helicase A; alpha-beta-alpha, structural genomics, structural genomics consortium, SGC, activator, ATP-binding, DNA-binding; HET: ADP; 2.80A {Homo sapiens}
Probab=26.00 E-value=23 Score=13.03 Aligned_cols=54 Identities=20% Similarity=0.273 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHH--HHCCCEEEEEEECC
Q ss_conf 9972999999726998999980367666740789999999--86498499995043
Q gi|254781176|r 85 AEECIDEITEMLDKTHMCFVTAGMGGGTGTGAAPIIAKIA--RNKGVLTVGVVTKP 138 (502)
Q Consensus 85 a~~~~~~i~~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a--~~~~~~~~~~v~~p 138 (502)
+...+++|.+.+++.++++|+++.|=|.-|-.-..+.+-. +..+.-.-.+||-|
T Consensus 62 i~~~~~~il~~i~~n~vvvV~G~TGsGKSTqiPq~Lle~~~~~~~~~~~~I~~tqP 117 (235)
T 3llm_A 62 VKKFESEILEAISQNSVVIIRGATGCGKTTQVPQFILDDFIQNDRAAECNIVVTQP 117 (235)
T ss_dssp GGGGHHHHHHHHHHCSEEEEECCTTSSHHHHHHHHHHHHHHHTTCGGGCEEEEEES
T ss_pred CHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECC
T ss_conf 16889999999997997999938989999999999998676427888865999637
No 311
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=25.97 E-value=23 Score=13.03 Aligned_cols=103 Identities=14% Similarity=0.160 Sum_probs=64.5
Q ss_pred CEEEEEEECC-CHHHHHHHHHHCCCCCCEEEEECCCHHHHH---H--CCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 6179999668-147999999985899844999825578855---1--899704851554255678888838999999972
Q gi|254781176|r 15 PRITVFGVGG-GGGNAVNNMVSSGLQGVNFVVANTDAQALM---M--SKAKQIIQLGSGITEGLGAGSHPEVGRAAAEEC 88 (502)
Q Consensus 15 ~~i~v~g~gg-~g~n~~~~~~~~~~~~~~~~~~ntd~~~l~---~--~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~ 88 (502)
-+|.|.|--| -|.+.|.+|.+.+-. +..+..+.|...+. . .....++..|.- + +
T Consensus 22 K~ILVTGg~GfiGs~lv~~Ll~~~~~-~~i~v~~~~~~~~~~~~~~~~~~~i~~i~~Di-~------------------~ 81 (344)
T 2gn4_A 22 QTILITGGTGSFGKCFVRKVLDTTNA-KKIIVYSRDELKQSEMAMEFNDPRMRFFIGDV-R------------------D 81 (344)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCC-SEEEEEESCHHHHHHHHHHHCCTTEEEEECCT-T------------------C
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCC-EEEEEEECCCCCHHHHHHHCCCCCEEEEECCC-C------------------H
T ss_conf 99999898878999999999963998-49999708754467899861799779997023-0------------------2
Q ss_pred HHHHHHHHCCCCEEEEEECCCCCCC------------CCHHHHHHHHHHHCCCEEEEEEEC
Q ss_conf 9999997269989999803676667------------407899999998649849999504
Q gi|254781176|r 89 IDEITEMLDKTHMCFVTAGMGGGTG------------TGAAPIIAKIARNKGVLTVGVVTK 137 (502)
Q Consensus 89 ~~~i~~~~~~~~~~~~~ag~gggtg------------tg~~p~ia~~a~~~~~~~~~~v~~ 137 (502)
.+.+..++.+.|.||-+|++.+--- .-.+--+.+.|++.++-.+-+++.
T Consensus 82 ~~~~~~~~~~~D~ViHlAa~~~v~~s~~~p~~~~~~Nv~gt~nll~a~~~~~ik~~i~~SS 142 (344)
T 2gn4_A 82 LERLNYALEGVDICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALST 142 (344)
T ss_dssp HHHHHHHTTTCSEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHCCCCEEEEECCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEC
T ss_conf 3444444128754685123477078887999999999999999999998569988999978
No 312
>2px0_A Flagellar biosynthesis protein FLHF; SRP GTPase, flagellum, protein transport, biosynthetic protein; HET: GNP; 3.00A {Bacillus subtilis} PDB: 2px3_A*
Probab=25.94 E-value=23 Score=13.02 Aligned_cols=52 Identities=23% Similarity=0.333 Sum_probs=33.7
Q ss_pred CEEEEEECCCCCCCCCHHHHHHHHHHH---CCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 899998036766674078999999986---49849999504300040678888999999999863335
Q gi|254781176|r 100 HMCFVTAGMGGGTGTGAAPIIAKIARN---KGVLTVGVVTKPFHFEGSRRMRVAESGIEALQETVDTL 164 (502)
Q Consensus 100 ~~~~~~ag~gggtgtg~~p~ia~~a~~---~~~~~~~~v~~pf~~eg~~r~~~a~~~~~~l~~~~d~~ 164 (502)
.+++++ |.||+|=+-.+||+|.. ..-..|++||.=.. | -.+.+.|+.|++-+
T Consensus 106 ~vI~lv----GptGvGKTTtiaKLAa~~~~~~~~~v~lit~Dt~-----R----~~A~eQLk~~a~~l 160 (296)
T 2px0_A 106 KYIVLF----GSTGAGKTTTLAKLAAISMLEKHKKIAFITTDTY-----R----IAAVEQLKTYAELL 160 (296)
T ss_dssp SEEEEE----ESTTSSHHHHHHHHHHHHHHTTCCCEEEEECCCS-----S----TTHHHHHHHHHTTT
T ss_pred CEEEEE----CCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCC-----C----HHHHHHHHHHHHHC
T ss_conf 889998----9999888999999999999957990699980799-----7----68999999999741
No 313
>3ixl_A Amdase, arylmalonate decarboxylase; enantioselective decarboxylation, lyase; HET: CME PAC; 1.45A {Bordetella bronchiseptica} PDB: 3ixm_A 2vlb_A 3dg9_A 3ip8_A* 3dtv_A* 3eis_A*
Probab=25.84 E-value=23 Score=13.01 Aligned_cols=29 Identities=10% Similarity=0.115 Sum_probs=18.5
Q ss_pred EEEEEEEECCCCCHHHHHHHHHHHCCCCC
Q ss_conf 58998761486204899998875270100
Q gi|254781176|r 226 RAMMGTGEASGHGRGIQAAEAAVANPLLD 254 (502)
Q Consensus 226 ~a~~g~g~~~g~~r~~~a~~~a~~~pll~ 254 (502)
.|++-.|..-..=+....+++.+.-|.+.
T Consensus 182 daI~iscT~~~t~~~i~~lE~~lg~PVis 210 (240)
T 3ixl_A 182 DGILLSSGGLLTLDAIPEVERRLGVPVVS 210 (240)
T ss_dssp SEEEEECTTSCCTTHHHHHHHHHSSCEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHHCCCEEE
T ss_conf 68998578861889999999998989997
No 314
>2jgq_A Triosephosphate isomerase; glycolysis, pentose shunt, gluconeogenesis, lipid synthesis, fatty acid biosynthesis; HET: QGA; 2.3A {Helicobacter pylori}
Probab=25.75 E-value=23 Score=13.00 Aligned_cols=86 Identities=8% Similarity=0.124 Sum_probs=51.3
Q ss_pred HHHCCCCEEEEEEEECCCCCHH-HHHHHHHHHCCCCCCCCCCCCCEEEEEE------ECCCCCCHHHHHHHHHHHHHHCC
Q ss_conf 7641586589987614862048-9999887527010002245553789996------16888899999999999997416
Q gi|254781176|r 219 SVMRNMGRAMMGTGEASGHGRG-IQAAEAAVANPLLDEASMKGSQGLLISI------TGGSDLTLFEVDEAATRIREEVD 291 (502)
Q Consensus 219 ~v~~~~g~a~~g~g~~~g~~r~-~~a~~~a~~~pll~~~~~~~a~~~l~~i------~~~~~~~l~e~~~~~~~i~~~~~ 291 (502)
..++++=..++.+||..-+... .......+..-|- ..+.. .+.++|-- =.|.-.+..++.++..+||..+.
T Consensus 109 ~a~~~~l~pI~CiGE~~~~~~~~~~~~~~~l~~~l~-~~~~~-~~~iiIAYEPvWAIGtG~~a~~~~i~~~~~~Ir~~~~ 186 (233)
T 2jgq_A 109 FFKSKNFKIVYCIGEELTTREKGFKAVKEFLSEQLE-NIDLN-YPNLVVAYEPIWAIGTKKSASLEDIYLTHGFLKQILN 186 (233)
T ss_dssp HHHHTTCEEEEEECCCHHHHHHCHHHHHHHHHHHHT-TSCTT-CTTEEEEECCGGGTTC--CCCHHHHHHHHHHHHHHSC
T ss_pred HHHHCCCEEEEEECCCHHHHHCCCHHHHHHHHHHHH-HCCCC-CCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHC
T ss_conf 999879969998376212233163059999999986-31002-2222246686331478998987899999999999972
Q ss_pred CCCCEEEEEEECCCC
Q ss_conf 886399985313465
Q gi|254781176|r 292 SEANIILGATFDEAL 306 (502)
Q Consensus 292 ~~a~ii~G~~~d~~~ 306 (502)
.+..|++|-.+.++-
T Consensus 187 ~~~~ilYGGSV~~~N 201 (233)
T 2jgq_A 187 QKTPLLYGGSVNTQN 201 (233)
T ss_dssp TTSCEEEESSCCTTT
T ss_pred CCCCEEEECCCCHHH
T ss_conf 688588707898759
No 315
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A*
Probab=25.66 E-value=23 Score=12.99 Aligned_cols=32 Identities=25% Similarity=0.522 Sum_probs=26.1
Q ss_pred CCCEEEEEEECCCHHHHHHHHHHCCCCCCEEE
Q ss_conf 38617999966814799999998589984499
Q gi|254781176|r 13 LKPRITVFGVGGGGGNAVNNMVSSGLQGVNFV 44 (502)
Q Consensus 13 ~~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~ 44 (502)
.-|||.|||=|=+|-.+--+|.+.|+..|..+
T Consensus 3 ~~~~VvIIGaGiaGL~aA~~L~~~G~~~V~vl 34 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAGITDLLIL 34 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTTCCCEEEE
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCCEEEE
T ss_conf 89988998978899999999996799988999
No 316
>2raq_A Conserved protein MTH889; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 3.11A {Methanothermobacterthermautotrophicus str} SCOP: d.58.61.1
Probab=25.42 E-value=23 Score=12.96 Aligned_cols=23 Identities=22% Similarity=0.561 Sum_probs=11.1
Q ss_pred CCCHHHHHHHHCCCCEEEEEEEE
Q ss_conf 58987878764158658998761
Q gi|254781176|r 211 NLDFADVRSVMRNMGRAMMGTGE 233 (502)
Q Consensus 211 n~df~d~~~v~~~~g~a~~g~g~ 233 (502)
||||.+++.++.+.|.++-.+-+
T Consensus 59 ~id~d~i~~~IE~~Gg~IHSIDe 81 (97)
T 2raq_A 59 DLDFDEITRAIESYGGSIHSVDE 81 (97)
T ss_dssp SCCHHHHHHHHHHTTCEEEEEEE
T ss_pred CCCHHHHHHHHHHCCCEEEEEEE
T ss_conf 77979999999984981775623
No 317
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=25.40 E-value=23 Score=12.96 Aligned_cols=30 Identities=23% Similarity=0.406 Sum_probs=25.2
Q ss_pred CCEEEEEEECCCHHHHHHHHHHCCCCCCEE
Q ss_conf 861799996681479999999858998449
Q gi|254781176|r 14 KPRITVFGVGGGGGNAVNNMVSSGLQGVNF 43 (502)
Q Consensus 14 ~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~ 43 (502)
..||.|||=|=||..+--+|.+.|+..|..
T Consensus 6 ~~~V~IIGaG~aGLsaA~~L~~~G~~~V~v 35 (424)
T 2b9w_A 6 DSRIAIIGAGPAGLAAGMYLEQAGFHDYTI 35 (424)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHTTCCCEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCCEEE
T ss_conf 997999898889999999998559997899
No 318
>2bpo_A CPR, P450R, NADPH-cytochrom P450 reductase; NADPH-cytochrome P450 reductase, diflavin reductase, FAD, FMN-binding, electron transfer; HET: FAD FMN NAP; 2.9A {Saccharomyces cerevisiae} PDB: 2bn4_A* 2bf4_A*
Probab=25.32 E-value=18 Score=13.82 Aligned_cols=17 Identities=24% Similarity=0.468 Sum_probs=10.6
Q ss_pred HCCCCEEEEEEEECCCC
Q ss_conf 41586589987614862
Q gi|254781176|r 221 MRNMGRAMMGTGEASGH 237 (502)
Q Consensus 221 ~~~~g~a~~g~g~~~g~ 237 (502)
|++.-.|++|.|-.+=+
T Consensus 133 l~~~~yavfGLGds~Y~ 149 (682)
T 2bpo_A 133 LSNLRYNMFGLGNSTYE 149 (682)
T ss_dssp STTCEEEEEEEECTTSS
T ss_pred CCCCEEEEECCCCCCHH
T ss_conf 78987999836789778
No 319
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=25.25 E-value=24 Score=12.94 Aligned_cols=35 Identities=17% Similarity=0.195 Sum_probs=20.2
Q ss_pred CCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEEC
Q ss_conf 69989999803676667407899999998649849999504
Q gi|254781176|r 97 DKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTK 137 (502)
Q Consensus 97 ~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~ 137 (502)
+.-+-|.|. |. |+.| -..+.+||.+|+-.|..+..
T Consensus 194 ~~g~~VlV~-G~-G~~G----~~a~~~a~~~g~~~Vi~~~~ 228 (376)
T 1e3i_A 194 TPGSTCAVF-GL-GCVG----LSAIIGCKIAGASRIIAIDI 228 (376)
T ss_dssp CTTCEEEEE-CC-SHHH----HHHHHHHHHTTCSEEEEECS
T ss_pred CCCCEEEEE-CC-CHHH----HHHHHHHHHHCCCEEEEECC
T ss_conf 899999999-55-5699----99999999819977999258
No 320
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=25.10 E-value=24 Score=12.92 Aligned_cols=43 Identities=12% Similarity=0.222 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCC--CCCC---------CHHHHHHHHCCCCE
Q ss_conf 99974467999999888887651665--5558---------98787876415865
Q gi|254781176|r 183 ADAFSMADQVLYSGVSCITDLMIKEG--LINL---------DFADVRSVMRNMGR 226 (502)
Q Consensus 183 ~~af~~~d~~l~~~v~~i~~~i~~~g--~in~---------df~d~~~v~~~~g~ 226 (502)
..|.-.+++. ..+++-+..++.++- +.+. --+|+++++....+
T Consensus 209 isaI~~a~dp-~~a~~~l~~~~~k~~~~~~~ag~d~s~gagi~adi~~~~~~~~~ 262 (540)
T 3nl6_A 209 VSDIIASLDA-AKSTKILRGLIDKTDYKFVNIGLSTKNSLTTTDEIQSIISNTLK 262 (540)
T ss_dssp SHHHHTCTTH-HHHHHHHHHHHHCCBCCCSSSBCCCCCSCCCHHHHHHHHHHHHH
T ss_pred EEHHCCCCCH-HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 8213049999-99999999731346643446778998752179999999985442
No 321
>2e67_A Hypothetical protein TTHB029; NPPSFA, national project on protein structural and functional analyses, structural genomics; 2.90A {Thermus thermophilus HB8}
Probab=25.07 E-value=24 Score=12.91 Aligned_cols=200 Identities=11% Similarity=-0.070 Sum_probs=88.5
Q ss_pred HHHHHHHHHCCCCCCEEEEECCCHHHHHHCCCCEEEEECCCCCCCCCC------CCCHHH-----------HHHH-----
Q ss_conf 799999998589984499982557885518997048515542556788------888389-----------9999-----
Q gi|254781176|r 27 GNAVNNMVSSGLQGVNFVVANTDAQALMMSKAKQIIQLGSGITEGLGA------GSHPEV-----------GRAA----- 84 (502)
Q Consensus 27 ~n~~~~~~~~~~~~~~~~~~ntd~~~l~~~~~~~~~~~g~~~~~g~g~------g~~~~~-----------g~~~----- 84 (502)
+..||.-++.|+-..--+-+|... .... ....|=|--.+|.|.-. -.-|.+ ....
T Consensus 25 s~~vn~ai~~G~vts~s~M~~~p~--~~~~-~~l~vGlHl~Lt~~~p~~~~~p~~~~psL~~~~G~F~~~~~~~~~~~~~ 101 (264)
T 2e67_A 25 THAQNGAYQALGLPTGSVMVPGAW--ASGV-KGEDLGVHLVLTSEWPAPRMRPLTEGESLRDEAGYFPESLEALWRKARA 101 (264)
T ss_dssp CHHHHHHHHHHCCCEEEECTTSTT--GGGC-CCTEEEEEECCCCCSSSSCCCCSSCCGGGCBTTTBCCSSHHHHHHHCCH
T ss_pred CHHHHHHHHHCCEEEEEEEECCHH--HHHC-CCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCH
T ss_conf 988999999397004553027888--9965-2768743578458888778787223665558888644669998733899
Q ss_pred ---HHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf ---99729999997269989999803676667407899999998649849999504300040678888999999999863
Q gi|254781176|r 85 ---AEECIDEITEMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPFHFEGSRRMRVAESGIEALQETV 161 (502)
Q Consensus 85 ---a~~~~~~i~~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf~~eg~~r~~~a~~~~~~l~~~~ 161 (502)
..|-.-+|...+++...-+|-.=++=-.--+..+++.++|++.++.....-+.+...=.......+ ..+..
T Consensus 102 ~eV~~El~AQi~~f~~~i~PsHiDsH~Hvh~~P~v~~~~~~la~~y~lp~~~~~~~~~~~~~~~~~~~~----~~~~~-- 175 (264)
T 2e67_A 102 EEVERELKAQIQAAAKLFSPTHLDAHQGAVLRPDLAEVYLRLAEAYRLVPLVPESLEGLGVPPPFLPEL----ERLLY-- 175 (264)
T ss_dssp HHHHHHHHHHHHHHHTTSCCCEEEEGGGGGGSHHHHHHHHHHHHHTTCEECCBSCCTTSCCCGGGHHHH----HHHHH--
T ss_pred HHHHHHHHHHHHHHHHCCCCCEECCCCCHHCCHHHHHHHHHHHHHHCCCEEECCCHHHCCCCHHHHHHH----HHHHH--
T ss_conf 999999999999999608997362753122386899999999998399834034013205664678999----98754--
Q ss_pred HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEEEEEECCCCCHHH
Q ss_conf 33545027888741366531899974467999999888887651665555898787876415865899876148620489
Q gi|254781176|r 162 DTLIVIPNQNLFRIANDKTTFADAFSMADQVLYSGVSCITDLMIKEGLINLDFADVRSVMRNMGRAMMGTGEASGHGRGI 241 (502)
Q Consensus 162 d~~i~i~n~~l~~~~~~~~~~~~af~~~d~~l~~~v~~i~~~i~~~g~in~df~d~~~v~~~~g~a~~g~g~~~g~~r~~ 241 (502)
....++......++-.......| -.+|.+.-.|+++++..||+.+- +++.. +. -..|..
T Consensus 176 --~~~~~~~~~~~~~~~~~~~~~~~---~~~l~~l~~G~~eim~HPg~~d~---~l~~~---s~----------~~~R~~ 234 (264)
T 2e67_A 176 --ETPFPQVRFLDPYGLPPEERLGF---YLDLAHLPPGLYYLVHHSALPTP---EGRAL---PD----------WPTREA 234 (264)
T ss_dssp --HCCSCCBEEECCTTSCGGGHHHH---HHHGGGCCSEEEEEEECCCCSCH---HHHTS---TT----------HHHHHH
T ss_pred --HCCCCCCEECCCCCCCCHHHHHH---HHHHHCCCCCCEEEEECCCCCCH---HHHHC---CC----------CHHHHH
T ss_conf --21345430034235671149999---99996189986799979999986---77618---87----------408799
Q ss_pred HHHHHHHHCCCCCCCCCC
Q ss_conf 999887527010002245
Q gi|254781176|r 242 QAAEAAVANPLLDEASMK 259 (502)
Q Consensus 242 ~a~~~a~~~pll~~~~~~ 259 (502)
+ -++|.||=+- .-++
T Consensus 235 E--~~~L~s~~~k-~~l~ 249 (264)
T 2e67_A 235 D--YFALSHPEVR-RVLA 249 (264)
T ss_dssp H--HHHHTSHHHH-HHHH
T ss_pred H--HHHHCCHHHH-HHHH
T ss_conf 9--9997299999-9998
No 322
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=24.97 E-value=24 Score=12.90 Aligned_cols=37 Identities=27% Similarity=0.358 Sum_probs=18.2
Q ss_pred EEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCC
Q ss_conf 980367666740789999999864984999950430004
Q gi|254781176|r 104 VTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPFHFE 142 (502)
Q Consensus 104 ~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf~~e 142 (502)
+.+|-|+ ..|--+=-.|+.|+++|+--+.+. .|+.+-
T Consensus 88 vi~g~~~-~s~~~~i~~a~~a~~~Gad~i~v~-pP~~~~ 124 (304)
T 3cpr_A 88 LIAGVGT-NNTRTSVELAEAAASAGADGLLVV-TPYYSK 124 (304)
T ss_dssp EEEECCC-SCHHHHHHHHHHHHHTTCSEEEEE-CCCSSC
T ss_pred EEEECCC-CHHHHHHHHHHHHHHCCCCEEEEC-CCCCCC
T ss_conf 7862574-129999999999997399999988-987789
No 323
>2iht_A Carboxyethylarginine synthase; thiamin diphosphate complex, transferase; HET: MSE TPP; 2.00A {Streptomyces clavuligerus} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1upb_A* 1upc_A* 1upa_A* 2ihu_A* 2ihv_A*
Probab=24.76 E-value=24 Score=12.87 Aligned_cols=53 Identities=17% Similarity=0.276 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECC
Q ss_conf 999997299999972699899998036766674078999999986498499995043
Q gi|254781176|r 82 RAAAEECIDEITEMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKP 138 (502)
Q Consensus 82 ~~~a~~~~~~i~~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~p 138 (502)
+++|-...+-..+.-...-+|+.|.|=|- +-+.|-+++...+. +-.|.++..+
T Consensus 57 E~~A~~~A~Gyar~tg~p~v~~~tsG~g~---~n~~~al~~A~~~~-~Pll~itg~~ 109 (573)
T 2iht_A 57 EFTAGVAADVLARITGRPQACWATLGPGM---TNLSTGIATSVLDR-SPVIALAAQS 109 (573)
T ss_dssp HHHHHHHHHHHHHHHCSCEEEEECTTHHH---HHHHHHHHHHHHHT-CCEEEEEEES
T ss_pred HHHHHHHHHHHHHHHCCCEEEEECCCHHH---HHHHHHHHHHHHHC-CCEEEEECCC
T ss_conf 89999999999999799889997837789---99999999999729-9879994516
No 324
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=24.59 E-value=24 Score=12.85 Aligned_cols=64 Identities=27% Similarity=0.269 Sum_probs=37.2
Q ss_pred EEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99980367666740789999999864984999950430004067888899999999986333545027
Q gi|254781176|r 102 CFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPFHFEGSRRMRVAESGIEALQETVDTLIVIPN 169 (502)
Q Consensus 102 ~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf~~eg~~r~~~a~~~~~~l~~~~d~~i~i~n 169 (502)
+-|.+|.| ++.|--+=-.|+.|++.|+--+- |..||.|-.. .....+-..++-+.++.=|++-|
T Consensus 70 ~~vi~gv~-~~s~~~~i~~a~~a~~~Gad~i~-v~pP~~~~~~--~~~~~~~~~~i~~~~~~pi~lYn 133 (294)
T 2ehh_A 70 IKVIAGTG-GNATHEAVHLTAHAKEVGADGAL-VVVPYYNKPT--QRGLYEHFKTVAQEVDIPIIIYN 133 (294)
T ss_dssp SEEEEECC-CSCHHHHHHHHHHHHHTTCSEEE-EECCCSSCCC--HHHHHHHHHHHHHHCCSCEEEEE
T ss_pred CCEEEEEC-CCCHHHHHHHHHHHHHCCCCEEE-ECCCCCCCCC--HHHHHHHHHHHHHHCCCCEEEEE
T ss_conf 87899817-84599999999999976999999-8899999989--99999999999971399789995
No 325
>3kd6_A Carbohydrate kinase, PFKB family; nucleoside kinase, AMP, PSI-II, NYSGXRC, structural genomics, protein structure initiative; HET: AMP; 1.88A {Chlorobaculum tepidum}
Probab=24.39 E-value=24 Score=12.82 Aligned_cols=28 Identities=14% Similarity=0.132 Sum_probs=20.1
Q ss_pred ECCCHHHHHHHHHHCCCCCCEEEEE-CCC
Q ss_conf 6681479999999858998449998-255
Q gi|254781176|r 22 VGGGGGNAVNNMVSSGLQGVNFVVA-NTD 49 (502)
Q Consensus 22 ~gg~g~n~~~~~~~~~~~~~~~~~~-ntd 49 (502)
.||++.|+...+.+.+.+.|.|+.. -.|
T Consensus 27 ~GG~a~n~a~~~~~lg~~~v~li~~vG~D 55 (313)
T 3kd6_A 27 LGGSSTYIALSASYFTDEPIRMVGVVGSD 55 (313)
T ss_dssp EECHHHHHHHHHTTTCSSCEEEEEEEETT
T ss_pred CCCHHHHHHHHHHHCCCCCEEEEEEEECC
T ss_conf 69789999999997699968999996083
No 326
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.3A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=24.30 E-value=25 Score=12.81 Aligned_cols=182 Identities=15% Similarity=0.158 Sum_probs=82.3
Q ss_pred CCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCHH---HHHH-------------------CCCCEEEEECCCCCCC
Q ss_conf 86179999668147999999985899844999825578---8551-------------------8997048515542556
Q gi|254781176|r 14 KPRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDAQ---ALMM-------------------SKAKQIIQLGSGITEG 71 (502)
Q Consensus 14 ~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~~---~l~~-------------------~~~~~~~~~g~~~~~g 71 (502)
|++|-+||+|-.|.+...+|.+.|.. ..+.|.+.. .|.. ...+..|.+=..
T Consensus 5 k~~IGfIGLG~MG~~mA~nL~~~G~~---V~v~drt~~k~~~l~~~~~~~~~~~~~s~~e~v~~l~~~~vIi~~v~---- 77 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRGYT---VAIYNRTTSKTEEVFKEHQDKNLVFTKTLEEFVGSLEKPRRIMLMVQ---- 77 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTTCC---EEEECSSHHHHHHHHHHTTTSCEEECSSHHHHHHTBCSSCEEEECCC----
T ss_pred CCCEEEEEEHHHHHHHHHHHHHCCCE---EEEEECCHHHHHHHHHHCCCCCCEECCCHHHHHHHCCCCCEEEEECC----
T ss_conf 89878980489899999999967991---79993999999999985566897527999999961799998999899----
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHH
Q ss_conf 78888838999999972999999726998999980367666740789999999864984999950430004067888899
Q gi|254781176|r 72 LGAGSHPEVGRAAAEECIDEITEMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPFHFEGSRRMRVAE 151 (502)
Q Consensus 72 ~g~g~~~~~g~~~a~~~~~~i~~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf~~eg~~r~~~a~ 151 (502)
+| .+..+-.+.+...|+.-++++- +||...+...+.++.+..--+.++-.|-+ -|+. -|.
T Consensus 78 --~~-------~~v~~vi~~l~~~l~~g~iiID-------~sts~~~~t~~~~~~l~~~gi~fldapVS-GG~~---gA~ 137 (474)
T 2iz1_A 78 --AG-------AATDATIKSLLPLLDIGDILID-------GGNTHFPDTMRRNAELADSGINFIGTGVS-GGEK---GAL 137 (474)
T ss_dssp --TT-------HHHHHHHHHHGGGCCTTCEEEE-------CSCCCHHHHHHHHHHTTTSSCEEEEEEEC-SHHH---HHH
T ss_pred --CC-------HHHHHHHHHHHHHCCCCCEEEE-------CCCCCHHHHHHHHHHHHHCCCEEECCCCC-CCHH---HHH
T ss_conf --85-------8999999999850779998984-------48888799999999998649846324334-5635---564
Q ss_pred HH-----------HHHHHHHHHHHHH---HHHHHHHHHCCCCCHHHHHHHHHHHHHHHH-HHHHHHHHHC----CCCCCC
Q ss_conf 99-----------9999986333545---027888741366531899974467999999-8888876516----655558
Q gi|254781176|r 152 SG-----------IEALQETVDTLIV---IPNQNLFRIANDKTTFADAFSMADQVLYSG-VSCITDLMIK----EGLINL 212 (502)
Q Consensus 152 ~~-----------~~~l~~~~d~~i~---i~n~~l~~~~~~~~~~~~af~~~d~~l~~~-v~~i~~~i~~----~g~in~ 212 (502)
.| .++++...+++=. -....-....++ .+--...+++++.+-.+ .+.|++.+.- -|+-|+
T Consensus 138 ~G~siMvGG~~~~~e~v~pil~~ia~k~~~~g~~~v~~~G~-~GsG~~vKmv~N~i~~~~m~~iaEa~~l~k~~~~~~~~ 216 (474)
T 2iz1_A 138 LGPSMMPGGQKEAYDLVAPIFEQIAAKAPQDGKPCVAYMGA-NGAGHYVKMVHNGIEYGDMQLIAESYDLLKRILGLSNA 216 (474)
T ss_dssp HCCCEEEEECHHHHHHHHHHHHHHSCBCTTTCCBSBCCCBS-TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
T ss_conf 03321017739999999999999843445589864888588-65889999999999999999999999999985277721
Q ss_pred CHHHHHHHHCC
Q ss_conf 98787876415
Q gi|254781176|r 213 DFADVRSVMRN 223 (502)
Q Consensus 213 df~d~~~v~~~ 223 (502)
|.++|-.....
T Consensus 217 di~~v~~~w~~ 227 (474)
T 2iz1_A 217 EIQAIFEEWNE 227 (474)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHHHC
T ss_conf 48999999857
No 327
>2if2_A Dephospho-COA kinase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 3.00A {Aquifex aeolicus VF5}
Probab=24.24 E-value=25 Score=12.81 Aligned_cols=20 Identities=35% Similarity=0.446 Sum_probs=10.0
Q ss_pred EEEEEEECCCHHHHHHHHHH
Q ss_conf 17999966814799999998
Q gi|254781176|r 16 RITVFGVGGGGGNAVNNMVS 35 (502)
Q Consensus 16 ~i~v~g~gg~g~n~~~~~~~ 35 (502)
||-|.|-=|+|=.+|..++.
T Consensus 3 kIgItG~iGSGKSTv~~~l~ 22 (204)
T 2if2_A 3 RIGLTGNIGCGKSTVAQMFR 22 (204)
T ss_dssp EEEEEECTTSSHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHH
T ss_conf 99997999777999999999
No 328
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefaciens STR. C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=23.93 E-value=25 Score=12.76 Aligned_cols=64 Identities=20% Similarity=0.079 Sum_probs=38.6
Q ss_pred EEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99980367666740789999999864984999950430004067888899999999986333545027
Q gi|254781176|r 102 CFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPFHFEGSRRMRVAESGIEALQETVDTLIVIPN 169 (502)
Q Consensus 102 ~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf~~eg~~r~~~a~~~~~~l~~~~d~~i~i~n 169 (502)
+.|++|-|+ +.|..+--.|+.|++.|+-.+-+ ..||.+-. -.+....-..++.+.+|.=|++-|
T Consensus 104 ~pvi~gv~~-~s~~~ai~~ak~a~~~Gad~v~v-~~P~~~~~--~~~~i~~~f~~ia~~~~~PiiiYn 167 (332)
T 2r8w_A 104 RTLMAGIGA-LRTDEAVALAKDAEAAGADALLL-APVSYTPL--TQEEAYHHFAAVAGATALPLAIYN 167 (332)
T ss_dssp SEEEEEECC-SSHHHHHHHHHHHHHHTCSEEEE-CCCCSSCC--CHHHHHHHHHHHHHHCSSCEEEEC
T ss_pred CEEEEECCC-CCHHHHHHHHHHHHHCCCCEEEE-CCCCCCCC--CCHHHHHHHHHHHHHCCCEEEEEE
T ss_conf 729994686-77899999998886569986996-58634655--558999999999860364389981
No 329
>2x3d_A SSO6206; unknown function; 2.70A {Sulfolobus solfataricus}
Probab=23.90 E-value=25 Score=12.76 Aligned_cols=25 Identities=28% Similarity=0.543 Sum_probs=18.1
Q ss_pred CCCHHHHHHHHCCCCEEEEEEEECC
Q ss_conf 5898787876415865899876148
Q gi|254781176|r 211 NLDFADVRSVMRNMGRAMMGTGEAS 235 (502)
Q Consensus 211 n~df~d~~~v~~~~g~a~~g~g~~~ 235 (502)
||||.+++.++.+.|.++-.+-+..
T Consensus 58 ~id~d~i~~~IE~~Gg~IHSIDeV~ 82 (96)
T 2x3d_A 58 SLNFDDIRKMLEEEGCAIHSIDEVV 82 (96)
T ss_dssp SCCHHHHHHHHHHTTCEEEEEEEEE
T ss_pred CCCHHHHHHHHHHCCCEEEEEEEEE
T ss_conf 7797999999997498177361254
No 330
>2z04_A Phosphoribosylaminoimidazole carboxylase ATPase subunit; purine nucleotide biosynthetic pathway, structural genomics, NPPSFA; 2.35A {Aquifex aeolicus}
Probab=23.87 E-value=25 Score=12.76 Aligned_cols=33 Identities=24% Similarity=0.373 Sum_probs=12.6
Q ss_pred EEECCCHHHHHHHHHHCCCCCCEEEEECCCHHH
Q ss_conf 996681479999999858998449998255788
Q gi|254781176|r 20 FGVGGGGGNAVNNMVSSGLQGVNFVVANTDAQA 52 (502)
Q Consensus 20 ~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~~~ 52 (502)
|||=|+|=-+.--.....--|+++++++.|..+
T Consensus 4 igIlG~GqL~~ml~~aAk~lGi~v~v~d~~~~~ 36 (365)
T 2z04_A 4 VGILGGGQLGWMTILEGRKLGFKFHVLEDKENA 36 (365)
T ss_dssp EEEECCSHHHHHHHHHHGGGTCEEEEECSSSSC
T ss_pred EEEECCCHHHHHHHHHHHHCCCEEEEEECCCCC
T ss_conf 999867899999999999789989999569989
No 331
>1vco_A CTP synthetase; tetramer, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; HET: GLN; 2.15A {Thermus thermophilus} SCOP: c.23.16.1 c.37.1.10 PDB: 1vcn_A 1vcm_A
Probab=23.87 E-value=25 Score=12.76 Aligned_cols=88 Identities=15% Similarity=0.207 Sum_probs=52.7
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHH--CCCCEEEEEECCCCCCCCCHHHHHHHHHHHC-------CCEEEEEEECCC-C
Q ss_conf 67888883899999997299999972--6998999980367666740789999999864-------984999950430-0
Q gi|254781176|r 71 GLGAGSHPEVGRAAAEECIDEITEML--DKTHMCFVTAGMGGGTGTGAAPIIAKIARNK-------GVLTVGVVTKPF-H 140 (502)
Q Consensus 71 g~g~g~~~~~g~~~a~~~~~~i~~~~--~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~-------~~~~~~~v~~pf-~ 140 (502)
|-=-|....+=-....|=.+.|+..- .++|+|++ .+||--|---+-..-+..|.+ +++-|-+.-.|| .
T Consensus 115 G~ylG~TVQviPHiTdeIk~~i~~~a~~~~~Di~iv--EiGGTVGDIEs~pFlEAiRQ~~~~~g~~n~~~iHvtlvP~l~ 192 (550)
T 1vco_A 115 GEYLSQTVQVIPHITDEIKERIRKVAEEQKAEIVVV--EVGGTVGDIESLPFLEAIRQFRFDEGEGNTLYLHLTLVPYLE 192 (550)
T ss_dssp TTTTTCCCCTTTHHHHHHHHHHHHHHHHTTCSEEEE--EECSCTTSSTTHHHHHHHHTHHHHHCTTSEEEEEEEECCEET
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHCCCCCCCCEEEE--ECCCEEECCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCC
T ss_conf 675785268668468999999985025788868999--568426410125789999999875496658999631201245
Q ss_pred CCCHHHHHHHHHHHHHHHHH
Q ss_conf 04067888899999999986
Q gi|254781176|r 141 FEGSRRMRVAESGIEALQET 160 (502)
Q Consensus 141 ~eg~~r~~~a~~~~~~l~~~ 160 (502)
.-|..+.+-.+-++.+|+..
T Consensus 193 ~~~E~KTKPTQhSVk~Lr~~ 212 (550)
T 1vco_A 193 TSEEFKTKPTQHSVATLRGV 212 (550)
T ss_dssp TTTEECCHHHHHHHHHHHHT
T ss_pred CCCCCCCCCHHHHHHHHHHC
T ss_conf 33444667428889999975
No 332
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, structural genomics; 2.00A {Methanocaldococcus jannaschii DSM2661}
Probab=23.71 E-value=25 Score=12.73 Aligned_cols=82 Identities=24% Similarity=0.312 Sum_probs=38.1
Q ss_pred CHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC--CCCEEEEEECCCCCCCCCH-HHHHHHHHH
Q ss_conf 5788551899704851554255678888838999999972999999726--9989999803676667407-899999998
Q gi|254781176|r 49 DAQALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAEECIDEITEMLD--KTHMCFVTAGMGGGTGTGA-APIIAKIAR 125 (502)
Q Consensus 49 d~~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~~~~i~~~~~--~~~~~~~~ag~gggtgtg~-~p~ia~~a~ 125 (502)
+.+++..+..+-.|--|+.+. .|.+=.+ +.++|+ ..+-|..+ |||||. +-++|+++.
T Consensus 41 ~~~~~aY~D~~l~i~~~~~i~-------~P~~~a~--------~l~~l~l~~g~~VLeI-----GtGsGY~ta~la~l~g 100 (215)
T 2yxe_A 41 HLKEYAYVDTPLEIGYGQTIS-------AIHMVGM--------MCELLDLKPGMKVLEI-----GTGCGYHAAVTAEIVG 100 (215)
T ss_dssp GGGGGTTSCSCEEEETTEEEC-------CHHHHHH--------HHHHTTCCTTCEEEEE-----CCTTSHHHHHHHHHHC
T ss_pred HHHHCCCCCCCCCCCCCCCCC-------CHHHHHH--------HHHHHCCCCCCEEEEE-----CCCCCHHHHHHHHHHC
T ss_conf 687344047876578886128-------7799999--------9986358999889982-----7884199999999848
Q ss_pred HCCCEEEEEEECCCCCCCHHHHHHHHHHHHHH
Q ss_conf 64984999950430004067888899999999
Q gi|254781176|r 126 NKGVLTVGVVTKPFHFEGSRRMRVAESGIEAL 157 (502)
Q Consensus 126 ~~~~~~~~~v~~pf~~eg~~r~~~a~~~~~~l 157 (502)
+.| .++++-..| .....|.+-+.++
T Consensus 101 ~~g-~V~~iE~~~------~l~~~a~~~l~~~ 125 (215)
T 2yxe_A 101 EDG-LVVSIERIP------ELAEKAERTLRKL 125 (215)
T ss_dssp TTS-EEEEEESCH------HHHHHHHHHHHHH
T ss_pred CCC-EEEEEECCH------HHHHHHHHHHHHC
T ss_conf 887-189995288------9999999999861
No 333
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=23.70 E-value=25 Score=12.73 Aligned_cols=100 Identities=20% Similarity=0.177 Sum_probs=52.3
Q ss_pred CCCHHHHHHHHHHH-----HHHHHHHH--CCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHH
Q ss_conf 88838999999972-----99999972--699899998036766674078999999986498499995043000406788
Q gi|254781176|r 75 GSHPEVGRAAAEEC-----IDEITEML--DKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPFHFEGSRRM 147 (502)
Q Consensus 75 g~~~~~g~~~a~~~-----~~~i~~~~--~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf~~eg~~r~ 147 (502)
|-+++..++.|.+. .+..+++| .+.|+|+|+ |=+..-+-++..|=+.|.-+ ++-+|+..- .
T Consensus 53 ~r~~~~~~~~a~~~gi~~~~~~~~ell~~~~iDaV~i~------tp~~~H~~~~~~al~aGkhV--l~EKPla~~----~ 120 (383)
T 3oqb_A 53 GRSAEKVEALAKRFNIARWTTDLDAALADKNDTMFFDA------ATTQARPGLLTQAINAGKHV--YCEKPIATN----F 120 (383)
T ss_dssp CSSSHHHHHHHHHTTCCCEESCHHHHHHCSSCCEEEEC------SCSSSSHHHHHHHHTTTCEE--EECSCSCSS----H
T ss_pred CCCHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCEEEEC------CCHHHHHHHHHHHHHCCCCE--EECCCCCCH----H
T ss_conf 59999999999984999221899999569999789989------98699999999999869947--802886332----9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 8899999999986333545027888741366531899974467999999
Q gi|254781176|r 148 RVAESGIEALQETVDTLIVIPNQNLFRIANDKTTFADAFSMADQVLYSG 196 (502)
Q Consensus 148 ~~a~~~~~~l~~~~d~~i~i~n~~l~~~~~~~~~~~~af~~~d~~l~~~ 196 (502)
..|++ |.++-+.....+. .+-..-+..+|..+-+++.++
T Consensus 121 ~e~~~-l~~~a~~~g~~~~---------vg~~~r~~p~~~~~k~li~~G 159 (383)
T 3oqb_A 121 EEALE-VVKLANSKGVKHG---------TVQDKLFLPGLKKIAFLRDSG 159 (383)
T ss_dssp HHHHH-HHHHHHHTTCCEE---------ECCGGGGSHHHHHHHHHHHTT
T ss_pred HHHHH-HHHHHHCCCCEEE---------EEEEECCCCCCCCCCCCCCCC
T ss_conf 99988-6546650596699---------997431466434432112211
No 334
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genomics, protein structure initiative, PSI; HET: NAD; 1.95A {Listeria innocua}
Probab=23.58 E-value=25 Score=12.72 Aligned_cols=134 Identities=15% Similarity=0.186 Sum_probs=74.3
Q ss_pred CCEEEEEEECCCHHHHHHHHHHCCCCCCEEEE-ECCCHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 86179999668147999999985899844999-82557885518997048515542556788888389999999729999
Q gi|254781176|r 14 KPRITVFGVGGGGGNAVNNMVSSGLQGVNFVV-ANTDAQALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAEECIDEI 92 (502)
Q Consensus 14 ~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~-~ntd~~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~~~~i 92 (502)
+-||-|||.|+-|-.-+..+. ...++++++ ++.+...+..... .+.. +- ..+
T Consensus 5 ~~rigiIG~G~~g~~h~~~~~--~~~~~~l~av~d~~~~~~~~~~~-----~~~~-----------------~~---~~~ 57 (359)
T 3e18_A 5 KYQLVIVGYGGMGSYHVTLAS--AADNLEVHGVFDILAEKREAAAQ-----KGLK-----------------IY---ESY 57 (359)
T ss_dssp CEEEEEECCSHHHHHHHHHHH--TSTTEEEEEEECSSHHHHHHHHT-----TTCC-----------------BC---SCH
T ss_pred CCCEEEECCCHHHHHHHHHHH--HCCCCEEEEEECCCHHHHHHHHH-----CCCC-----------------CC---CCH
T ss_conf 771999946799999999998--58995899998899999999986-----2997-----------------01---999
Q ss_pred HHHHC--CCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99726--9989999803676667407899999998649849999504300040678888999999999863335450278
Q gi|254781176|r 93 TEMLD--KTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPFHFEGSRRMRVAESGIEALQETVDTLIVIPNQ 170 (502)
Q Consensus 93 ~~~~~--~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf~~eg~~r~~~a~~~~~~l~~~~d~~i~i~n~ 170 (502)
.++|+ ..|+|+|+ |-+-.-+-+++.|-+.|.-+ ++-+||..- ...|++ |.++.+..+..+.+.
T Consensus 58 ~ell~~~~iD~V~i~------tp~~~h~~~~~~al~~gkhv--~~EKP~a~~----~~e~~~-l~~~~~~~~~~~~v~-- 122 (359)
T 3e18_A 58 EAVLADEKVDAVLIA------TPNDSHKELAISALEAGKHV--VCEKPVTMT----SEDLLA-IMDVAKRVNKHFMVH-- 122 (359)
T ss_dssp HHHHHCTTCCEEEEC------SCGGGHHHHHHHHHHTTCEE--EEESSCCSS----HHHHHH-HHHHHHHHTCCEEEE--
T ss_pred HHHHCCCCCCEEEEC------CCCHHHHHHHHHHHHCCCEE--EEECCCCCH----HHHHHH-HHHHHHHCCCCCCCC--
T ss_conf 999559998989987------88055235678888539819--995786420----878878-899997527654222--
Q ss_pred HHHHHCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 88741366531899974467999999
Q gi|254781176|r 171 NLFRIANDKTTFADAFSMADQVLYSG 196 (502)
Q Consensus 171 ~l~~~~~~~~~~~~af~~~d~~l~~~ 196 (502)
...-+..+|..+=+.|..+
T Consensus 123 -------~~~r~~p~~~~~k~~i~~g 141 (359)
T 3e18_A 123 -------QNRRWDEDFLIIKEMFEQK 141 (359)
T ss_dssp -------CGGGGCHHHHHHHHHHHHT
T ss_pred -------CCCCCCCCCHHHHHHHHHC
T ss_conf -------2211475220243321221
No 335
>2v8p_A 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; nucleotide-binding, isoprene biosynthesis, transferase, ATP-binding, non-mevalonate; HET: CDP ADP; 2.1A {Aquifex aeolicus} PDB: 2v2v_A* 2v2q_A* 2v34_A* 2v2z_A* 2vf3_A*
Probab=23.55 E-value=22 Score=13.17 Aligned_cols=26 Identities=15% Similarity=0.147 Sum_probs=16.6
Q ss_pred HHHHCCCCEEEEEEEECCCCCHHHHHHH
Q ss_conf 8764158658998761486204899998
Q gi|254781176|r 218 RSVMRNMGRAMMGTGEASGHGRGIQAAE 245 (502)
Q Consensus 218 ~~v~~~~g~a~~g~g~~~g~~r~~~a~~ 245 (502)
...|+.+|.++|++.. .++.+..|.+
T Consensus 235 ~~~lSGSGstvfal~~--~~~~~~~a~k 260 (271)
T 2v8p_A 235 KPFVSGSGSTVYFFGG--ASEELKKAAK 260 (271)
T ss_dssp CCEECTTSSCEEESSC--CCHHHHHHHH
T ss_pred CEEEECCCHHHEEEEC--CHHHHHHHHH
T ss_conf 8899784432168989--9999999874
No 336
>3i45_A Twin-arginine translocation pathway signal protein; structural genomics, protein structure initiative; 1.36A {Rhodospirillum rubrum atcc 11170}
Probab=23.54 E-value=25 Score=12.71 Aligned_cols=51 Identities=22% Similarity=0.265 Sum_probs=38.4
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEE
Q ss_conf 88838999999972999999726998999980367666740789999999864984999950
Q gi|254781176|r 75 GSHPEVGRAAAEECIDEITEMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVT 136 (502)
Q Consensus 75 g~~~~~g~~~a~~~~~~i~~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~ 136 (502)
+++|..+..++.+-.++ ++..+++ |+.+|+.+..++.++++.+++.++...
T Consensus 55 ~~~p~~a~~~~~~li~~-----~~v~~ii------G~~~s~~~~a~~~~~~~~~ip~i~~~a 105 (387)
T 3i45_A 55 GGDPGKAVTAAQELLTR-----HGVHALA------GTFLSHVGLAVSDFARQRKVLFMASEP 105 (387)
T ss_dssp TTCHHHHHHHHHHHHHH-----HCCSEEE------ECCSHHHHHHHHHHHHHHTCCEEECSC
T ss_pred CCCHHHHHHHHHHHHHC-----CCCEEEE------ECCCCHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 99999999999999962-----8977999------415338899999999983886334654
No 337
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; reductive methylation, structural genomics, PSI 2, protein structure initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=23.36 E-value=25 Score=12.69 Aligned_cols=95 Identities=11% Similarity=0.100 Sum_probs=57.5
Q ss_pred CEEEEEEECCCHHHHHHHHHHCCCCCCEEEE-ECCCHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 6179999668147999999985899844999-825578855189970485155425567888883899999997299999
Q gi|254781176|r 15 PRITVFGVGGGGGNAVNNMVSSGLQGVNFVV-ANTDAQALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAEECIDEIT 93 (502)
Q Consensus 15 ~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~-~ntd~~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~~~~i~ 93 (502)
-||-|||+|..|...+..+. ...++++++ ++.|...+........+ ...+ .+.+.+.
T Consensus 2 ~kigiIG~G~~~~~~~~~l~--~~~~~~lvav~d~~~~~~~~~a~~~~~---~~~~-----------------~~~e~l~ 59 (325)
T 2ho3_A 2 LKLGVIGTGAISHHFIEAAH--TSGEYQLVAIYSRKLETAATFASRYQN---IQLF-----------------DQLEVFF 59 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHH--HTTSEEEEEEECSSHHHHHHHGGGSSS---CEEE-----------------SCHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHH--HCCCEEEEEEECCCHHHHHHHHHHCCC---CCCC-----------------CHHHHHH
T ss_conf 59999998399999999998--688908999988999999999998499---8356-----------------8599971
Q ss_pred HHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCC
Q ss_conf 972699899998036766674078999999986498499995043000
Q gi|254781176|r 94 EMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPFHF 141 (502)
Q Consensus 94 ~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf~~ 141 (502)
+ .+.|.||| .|-+..-.-+++.|-+.|.-+ ++-+|+..
T Consensus 60 ~--~~iD~V~I------~tp~~~H~~~~~~al~~gkhV--~~EKP~a~ 97 (325)
T 2ho3_A 60 K--SSFDLVYI------ASPNSLHFAQAKAALSAGKHV--ILEKPAVS 97 (325)
T ss_dssp T--SSCSEEEE------CSCGGGHHHHHHHHHHTTCEE--EEESSCCS
T ss_pred C--CCCCEEEE------ECCCCHHHHHHHHHHHCCCCH--HCCCCCCC
T ss_conf 8--99989999------589603159999998634512--22798311
No 338
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=23.18 E-value=26 Score=12.66 Aligned_cols=27 Identities=19% Similarity=0.214 Sum_probs=15.7
Q ss_pred HHHHHCCCCCCCCHHHHHHHHCCCCEE
Q ss_conf 876516655558987878764158658
Q gi|254781176|r 201 TDLMIKEGLINLDFADVRSVMRNMGRA 227 (502)
Q Consensus 201 ~~~i~~~g~in~df~d~~~v~~~~g~a 227 (502)
.+.+++|.+-=+|+.-+..+-+..|..
T Consensus 143 ~EspsNP~l~v~Di~~i~~ia~~~g~~ 169 (386)
T 1cs1_A 143 VESPSNPLLRVVDIAKICHLAREVGAV 169 (386)
T ss_dssp EECSCTTTCCCCCHHHHHHHHHHTTCE
T ss_pred ECCCCCCCCCCCCHHHHHHHHHHCCCE
T ss_conf 657889754235689999889874986
No 339
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE NDP; 1.70A {Ralstonia eutropha JMP134}
Probab=23.16 E-value=26 Score=12.66 Aligned_cols=38 Identities=21% Similarity=0.345 Sum_probs=22.1
Q ss_pred HCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECC
Q ss_conf 2699899998036766674078999999986498499995043
Q gi|254781176|r 96 LDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKP 138 (502)
Q Consensus 96 ~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~p 138 (502)
++.-+.|+|. |-+|+.| -....+||.+|+-+|+++..+
T Consensus 169 ~~~g~~vlv~-g~~G~vG----~~~iq~ak~~G~~vi~~~~~~ 206 (379)
T 3iup_A 169 LEGHSALVHT-AAASNLG----QMLNQICLKDGIKLVNIVRKQ 206 (379)
T ss_dssp HTTCSCEEES-STTSHHH----HHHHHHHHHHTCCEEEEESSH
T ss_pred CCCCCEEEEC-CCCCCCH----HHHHHHHHHCCCEEEEEECCH
T ss_conf 6899766761-1577400----899999998799899996999
No 340
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin B6, lyase; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A*
Probab=22.73 E-value=26 Score=12.60 Aligned_cols=43 Identities=9% Similarity=0.075 Sum_probs=29.0
Q ss_pred HHHHHHHHCCCCEEEEEECCCCCCCCCH---HHHHHHHHHHCCCEE
Q ss_conf 9999997269989999803676667407---899999998649849
Q gi|254781176|r 89 IDEITEMLDKTHMCFVTAGMGGGTGTGA---APIIAKIARNKGVLT 131 (502)
Q Consensus 89 ~~~i~~~~~~~~~~~~~ag~gggtgtg~---~p~ia~~a~~~~~~~ 131 (502)
++.|.+........|++.+--|.|.||+ -+-|+++|++.|+-.
T Consensus 223 ~~~i~~~~~~g~~p~~VvataGtT~tGaiDpl~~I~~i~~~~~~wl 268 (486)
T 1js3_A 223 QEALERDKAAGLIPFFVVATLGTTSCCSFDNLLEVGPICHEEDIWL 268 (486)
T ss_dssp HHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEE
T ss_conf 9999998754998659996158866513146999999997438727
No 341
>1v71_A Serine racemase, hypothetical protein C320.14 in chromosome III; dimer, PLP, isomerase; HET: PLP; 1.70A {Schizosaccharomyces pombe} SCOP: c.79.1.1 PDB: 1wtc_A* 2zpu_A* 2zr8_A*
Probab=22.71 E-value=26 Score=12.60 Aligned_cols=41 Identities=32% Similarity=0.353 Sum_probs=20.9
Q ss_pred HHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCC--CEEEEE
Q ss_conf 9999997269989999803676667407899999998649--849999
Q gi|254781176|r 89 IDEITEMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKG--VLTVGV 134 (502)
Q Consensus 89 ~~~i~~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~--~~~~~~ 134 (502)
..||.+.+...|.||+..|-| ||-+|. +...|..+ .-++++
T Consensus 165 ~~Ei~~q~~~~d~vv~~~G~G-g~~~Gi----~~~~~~~~~~~~ii~v 207 (323)
T 1v71_A 165 AKELFEEVGPLDALFVCLGGG-GLLSGS----ALAARHFAPNCEVYGV 207 (323)
T ss_dssp HHHHHHHHCCCSEEEEECSSS-HHHHHH----HHHHHHHCTTCEEEEE
T ss_pred HHHHHHHHCCCCEEEEECCHH-HHHHHH----HHHHHHHCCCCEEEEC
T ss_conf 999998548989999937827-889999----9999975998538611
No 342
>3iij_A Coilin-interacting nuclear ATPase protein; alpha and beta proteins (A/B), protein binding, transferase, phosphotransferase; HET: ADP; 1.76A {Homo sapiens} PDB: 3iik_A 3iil_A* 3iim_A* 1rkb_A
Probab=22.68 E-value=26 Score=12.60 Aligned_cols=33 Identities=21% Similarity=0.381 Sum_probs=25.2
Q ss_pred CCCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEE
Q ss_conf 3861799996681479999999858998449998
Q gi|254781176|r 13 LKPRITVFGVGGGGGNAVNNMVSSGLQGVNFVVA 46 (502)
Q Consensus 13 ~~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ 46 (502)
..|+|.++|.-|+|=.+|-+.+...+. ..|+-+
T Consensus 10 ~~pnI~i~G~pG~GKTTiak~La~~l~-~~~id~ 42 (180)
T 3iij_A 10 LLPNILLTGTPGVGKTTLGKELASKSG-LKYINV 42 (180)
T ss_dssp CCCCEEEECSTTSSHHHHHHHHHHHHC-CEEEEH
T ss_pred CCCCEEEECCCCCCHHHHHHHHHHHHC-CCEEEH
T ss_conf 089579989999888999999999969-987766
No 343
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=22.38 E-value=27 Score=12.55 Aligned_cols=58 Identities=24% Similarity=0.287 Sum_probs=34.3
Q ss_pred ECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 03676667407899999998649849999504300040678888999999999863335450
Q gi|254781176|r 106 AGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPFHFEGSRRMRVAESGIEALQETVDTLIVI 167 (502)
Q Consensus 106 ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf~~eg~~r~~~a~~~~~~l~~~~d~~i~i 167 (502)
+|.| ++.|-.+=-.|+.|+++|+=-+ .|..||.|-.. -+...+-...+.+.+|.=|++
T Consensus 86 ~gv~-~~s~~~~i~~a~~a~~~Gad~i-~v~pP~~~~~~--~~~i~~~~~~i~~~~~~pi~l 143 (301)
T 1xky_A 86 AGTG-SNNTHASIDLTKKATEVGVDAV-MLVAPYYNKPS--QEGMYQHFKAIAESTPLPVML 143 (301)
T ss_dssp EECC-CSCHHHHHHHHHHHHHTTCSEE-EEECCCSSCCC--HHHHHHHHHHHHHTCSSCEEE
T ss_pred EEEC-CHHHHHHHHHHHHHHHCCCCEE-EECCCCCCCCC--HHHHHHHHHHHHHCCCCCEEE
T ss_conf 8727-3669999999999997599999-97899789989--999999999998518997899
No 344
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=22.30 E-value=21 Score=13.26 Aligned_cols=34 Identities=21% Similarity=0.401 Sum_probs=19.1
Q ss_pred CCCCCCCCCH-HHHHHHHHHHCCCEEEEEEECCCCCC
Q ss_conf 3676667407-89999999864984999950430004
Q gi|254781176|r 107 GMGGGTGTGA-APIIAKIARNKGVLTVGVVTKPFHFE 142 (502)
Q Consensus 107 g~gggtgtg~-~p~ia~~a~~~~~~~~~~v~~pf~~e 142 (502)
+|-=|||||+ +|.+|. +.-+.-.+|+=.-|-..|
T Consensus 69 ~lDiGtGsg~I~~~L~~--~~~~~~~~~~Di~~~al~ 103 (254)
T 2h00_A 69 GIDIGTGASCIYPLLGA--TLNGWYFLATEVDDMCFN 103 (254)
T ss_dssp EEEESCTTTTHHHHHHH--HHHCCEEEEEESCHHHHH
T ss_pred EEEECCCHHHHHHHHHH--HCCCCEEEEEECCHHHHH
T ss_conf 89956787899999999--779975999989999999
No 345
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural genomics; HET: NDP; 1.80A {Thermus thermophilus HB8} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=22.26 E-value=27 Score=12.54 Aligned_cols=173 Identities=17% Similarity=0.224 Sum_probs=90.0
Q ss_pred CEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCC-HHHHHH--------C------CCCEEEEECCCCCCCCCCCCCHH
Q ss_conf 61799996681479999999858998449998255-788551--------8------99704851554255678888838
Q gi|254781176|r 15 PRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTD-AQALMM--------S------KAKQIIQLGSGITEGLGAGSHPE 79 (502)
Q Consensus 15 ~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd-~~~l~~--------~------~~~~~~~~g~~~~~g~g~g~~~~ 79 (502)
-||-+||+|-.|.....++.+.+. .++.|-. ..+... + .++. +.+- -|.
T Consensus 2 ~kIgfIGlG~MG~~mA~~L~~~g~----~~v~nr~~~k~~~~~~~~~~~~~~~e~~~~~d~-vi~~-----------~~~ 65 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLARRFP----TLVWNRTFEKALRHQEEFGSEAVPLERVAEARV-IFTC-----------LPT 65 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHTTSC----EEEECSSTHHHHHHHHHHCCEECCGGGGGGCSE-EEEC-----------CSS
T ss_pred CEEEEECHHHHHHHHHHHHHHCCC----EEEEECCHHHHHHHHHHCCCCCCCHHHHHCCCE-EEEC-----------CCC
T ss_conf 889997518888999999994898----799989999999999971764687999845887-8850-----------676
Q ss_pred HHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC-CHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHH-----
Q ss_conf 99999997299999972699899998036766674-078999999986498499995043000406788889999-----
Q gi|254781176|r 80 VGRAAAEECIDEITEMLDKTHMCFVTAGMGGGTGT-GAAPIIAKIARNKGVLTVGVVTKPFHFEGSRRMRVAESG----- 153 (502)
Q Consensus 80 ~g~~~a~~~~~~i~~~~~~~~~~~~~ag~gggtgt-g~~p~ia~~a~~~~~~~~~~v~~pf~~eg~~r~~~a~~~----- 153 (502)
-.++.+-...+...+. ..-++|-.. |.+ ..+--+++.+++.|+ .++--|.. =|+ ..|..|
T Consensus 66 --~~~~~~~~~~~~~~~~-~g~~iId~s----T~~p~~~~~~~~~~~~~g~---~~ldaPVs-Gg~---~~A~~g~l~~~ 131 (289)
T 2cvz_A 66 --TREVYEVAEALYPYLR-EGTYWVDAT----SGEPEASRRLAERLREKGV---TYLDAPVS-GGT---SGAEAGTLTVM 131 (289)
T ss_dssp --HHHHHHHHHHHTTTCC-TTEEEEECS----CCCHHHHHHHHHHHHTTTE---EEEECCEE-SHH---HHHHHTCEEEE
T ss_pred --CCEEEEHHHHHHHHCC-CCCEEEECC----CCCHHHHHHHHHHHHHCCC---EEECCCCC-CCH---HHHHCCCEEEE
T ss_conf --4132213246887526-898477578----8899999999999997799---08826777-799---99962984799
Q ss_pred -------HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH-HHHHHHHHHHCCCCCCCCHHHHHHHHCCC
Q ss_conf -------999998633354502788874136653189997446799999-98888876516655558987878764158
Q gi|254781176|r 154 -------IEALQETVDTLIVIPNQNLFRIANDKTTFADAFSMADQVLYS-GVSCITDLMIKEGLINLDFADVRSVMRNM 224 (502)
Q Consensus 154 -------~~~l~~~~d~~i~i~n~~l~~~~~~~~~~~~af~~~d~~l~~-~v~~i~~~i~~~g~in~df~d~~~v~~~~ 224 (502)
+++.+. +.-+ -.+.+. .++ .+--.+.+++++.+.- .+.++.+.+.-----+||...+..+++.+
T Consensus 132 vgG~~~~~~~~~p----l~~~-~~~~~~-~G~-~G~a~~~Kl~~N~l~~~~~~~~aEal~la~~~Gld~~~~~~vl~~~ 203 (289)
T 2cvz_A 132 LGGPEEAVERVRP----FLAY-AKKVVH-VGP-VGAGHAVKAINNALLAVNLWAAGEGLLALVKQGVSAEKALEVINAS 203 (289)
T ss_dssp EESCHHHHHHHGG----GCTT-EEEEEE-EES-TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHTTS
T ss_pred ECCCHHHHHHHHH----HHHH-HCCCEE-CCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC
T ss_conf 7146888999879----9984-286322-399-9701899998899999999999999999998597999999999637
No 346
>2vpq_A Acetyl-COA carboxylase; bacteria, ATP-grAsp domain, biotin carboxylase, ligase; HET: ANP; 2.1A {Staphylococcus aureus}
Probab=22.26 E-value=27 Score=12.54 Aligned_cols=200 Identities=14% Similarity=0.130 Sum_probs=93.9
Q ss_pred EEEEEEECCCHHHHHHHHHHCCCCCCEEEEECC--CHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 179999668147999999985899844999825--578855189970485155425567888883899999997299999
Q gi|254781176|r 16 RITVFGVGGGGGNAVNNMVSSGLQGVNFVVANT--DAQALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAEECIDEIT 93 (502)
Q Consensus 16 ~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~nt--d~~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~~~~i~ 93 (502)
||.|.+=|=-.+-++....+.| .+.|++++ |..++....|+..+.||.... . ..-.+.+.|.
T Consensus 3 kiLIanrGeiA~riira~relG---i~tVaV~s~~D~~a~~~~~ADe~~~i~~~~~------~-------~syLd~~~Ii 66 (451)
T 2vpq_A 3 KVLIANRGEIAVRIIRACRDLG---IQTVAIYSEGDKDALHTQIADEAYCVGPTLS------K-------DSYLNIPNIL 66 (451)
T ss_dssp EEEECCCHHHHHHHHHHHHHTT---CEEEEEEEGGGTTCHHHHHSSEEEEEECSSG------G-------GTTTCHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHCC---CEEEEECCCHHHCCCCHHHCCEEEEECCCCC------C-------CCCCCHHHHH
T ss_conf 8999897099999999999879---9599984836746889778899998189864------2-------3436899999
Q ss_pred HHHC--CCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9726--99899998036766674078999999986498499995043000406788889999999998633354502788
Q gi|254781176|r 94 EMLD--KTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPFHFEGSRRMRVAESGIEALQETVDTLIVIPNQN 171 (502)
Q Consensus 94 ~~~~--~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf~~eg~~r~~~a~~~~~~l~~~~d~~i~i~n~~ 171 (502)
++.. +.|- |..|+|+=+ .-+-.|+...+.|+.-+|- .| +.-..+. -+.-..++.+.++ +=++|--
T Consensus 67 ~ia~~~~~Da--IhPGyGfls---En~~fa~~~~~~gi~fIGP--s~---~~i~~~g-dK~~ar~~a~~~g-vPv~pg~- 133 (451)
T 2vpq_A 67 SIATSTGCDG--VHPGYGFLA---ENADFAELCEACQLKFIGP--SY---QSIQKMG-IKDVAKAEMIKAN-VPVVPGS- 133 (451)
T ss_dssp HHHHHTTCSE--EECCSSTTT---TCHHHHHHHHTTTCEESSS--CH---HHHHHHH-SHHHHHHHHHHTT-CCBCSBC-
T ss_pred HHHHHHCCCE--EEECHHHHC---CCHHHHHHHHHCCCEECCC--CH---HHHHHHH-CHHHHHHHHHHCC-CCCCCCC-
T ss_conf 9999978299--995866634---4667789999759846079--79---9999864-8689999999869-9918997-
Q ss_pred HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHH---
Q ss_conf 87413665318999744679999998888876516655558987878764158658998761486204899998875---
Q gi|254781176|r 172 LFRIANDKTTFADAFSMADQVLYSGVSCITDLMIKEGLINLDFADVRSVMRNMGRAMMGTGEASGHGRGIQAAEAAV--- 248 (502)
Q Consensus 172 l~~~~~~~~~~~~af~~~d~~l~~~v~~i~~~i~~~g~in~df~d~~~v~~~~g~a~~g~g~~~g~~r~~~a~~~a~--- 248 (502)
...-.+..++.+.|.+ |--|=+ ||.++..+|+.| .....++-..+|.+.|.
T Consensus 134 ----~~~~~~~~ea~~~a~~------------IGyPvi-------IKas~ggGGrGm---riV~~~~el~~a~~~a~~ea 187 (451)
T 2vpq_A 134 ----DGLMKDVSEAKKIAKK------------IGYPVI-------IKATAGGGGKGI---RVARDEKELETGFRMTEQEA 187 (451)
T ss_dssp ----SSCBSCHHHHHHHHHH------------HCSSEE-------EEETTCCTTCSE---EEESSHHHHHHHHHHHHHHH
T ss_pred ----CCCCCCHHHHHHHHHH------------CCCCEE-------EEECCCCCCCCC---EEECCCHHHHHHHHHHHHHH
T ss_conf ----7777999999999987------------399699-------998878998862---68758245699999999999
Q ss_pred -H----CCCCCCCCCCCCCEEEEEEEC
Q ss_conf -2----701000224555378999616
Q gi|254781176|r 249 -A----NPLLDEASMKGSQGLLISITG 270 (502)
Q Consensus 249 -~----~pll~~~~~~~a~~~l~~i~~ 270 (502)
. ..+|=+..|.|++-+=|.|.|
T Consensus 188 ~~~f~~~~v~iE~~i~~~rhiEvqvl~ 214 (451)
T 2vpq_A 188 QTAFGNGGLYMEKFIENFRHIEIQIVG 214 (451)
T ss_dssp HHHHSCCCEEEEECCCSEEEEEEEEEE
T ss_pred HHCCCCCCEEEEEECCCCEEEEEEEEE
T ss_conf 854799838999735997799999998
No 347
>2eyq_A TRCF, transcription-repair coupling factor; MFD, SF2 ATPase, hydrolase; HET: EPE; 3.20A {Escherichia coli} SCOP: b.34.18.1 c.37.1.19 c.37.1.19 c.37.1.19 c.37.1.19 d.315.1.1
Probab=22.14 E-value=27 Score=12.52 Aligned_cols=28 Identities=29% Similarity=0.379 Sum_probs=20.8
Q ss_pred CCCCCCCCHHHHHHHHHHHCCCEEEEEE
Q ss_conf 6766674078999999986498499995
Q gi|254781176|r 108 MGGGTGTGAAPIIAKIARNKGVLTVGVV 135 (502)
Q Consensus 108 ~gggtgtg~~p~ia~~a~~~~~~~~~~v 135 (502)
+||-||++.|-++|.+++..+-.++-|+
T Consensus 22 lggl~gsa~a~~iA~l~~~~~~pilvV~ 49 (1151)
T 2eyq_A 22 LGELTGAACATLVAEIAERHAGPVVLIA 49 (1151)
T ss_dssp BCCCCTTHHHHHHHHHHHSSSSEEEEEE
T ss_pred ECCCCCHHHHHHHHHHHHHHCCCEEEEE
T ss_conf 4786862999999999997689989990
No 348
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=22.06 E-value=24 Score=12.95 Aligned_cols=32 Identities=22% Similarity=0.308 Sum_probs=19.3
Q ss_pred CCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEE
Q ss_conf 99899998036766674078999999986498499995
Q gi|254781176|r 98 KTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVV 135 (502)
Q Consensus 98 ~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v 135 (502)
.-+-|+|. |- |+.| -..+.+||.+|+..|-++
T Consensus 192 ~g~~VlV~-Ga-G~vG----~~a~~~a~~~G~~~Vi~~ 223 (374)
T 1cdo_A 192 PGSTCAVF-GL-GAVG----LAAVMGCHSAGAKRIIAV 223 (374)
T ss_dssp TTCEEEEE-CC-SHHH----HHHHHHHHHTTCSEEEEE
T ss_pred CCCEEEEE-CC-CHHH----HHHHHHHHHCCCCEEEEE
T ss_conf 98989998-98-5799----999999998499989999
No 349
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=22.02 E-value=27 Score=12.50 Aligned_cols=36 Identities=19% Similarity=0.307 Sum_probs=26.8
Q ss_pred CCCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECC
Q ss_conf 386179999668147999999985899844999825
Q gi|254781176|r 13 LKPRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANT 48 (502)
Q Consensus 13 ~~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~nt 48 (502)
..+||.|||=|=||..+...+.+....+.+.+.++-
T Consensus 34 ~gkKVVIIGgG~AGl~aA~~l~r~~~~~~~Vtlie~ 69 (490)
T 2bc0_A 34 WGSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQ 69 (490)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHHCCCCCEEEEECC
T ss_conf 898299999789999999999974899881999889
No 350
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling, bifunctional enzyme; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=22.00 E-value=27 Score=12.50 Aligned_cols=75 Identities=13% Similarity=0.205 Sum_probs=42.5
Q ss_pred CCCEEEEEEEECCC---CCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEE
Q ss_conf 58658998761486---204899998875270100022455537899961688889999999999999741688639998
Q gi|254781176|r 223 NMGRAMMGTGEASG---HGRGIQAAEAAVANPLLDEASMKGSQGLLISITGGSDLTLFEVDEAATRIREEVDSEANIILG 299 (502)
Q Consensus 223 ~~g~a~~g~g~~~g---~~r~~~a~~~a~~~pll~~~~~~~a~~~l~~i~~~~~~~l~e~~~~~~~i~~~~~~~a~ii~G 299 (502)
+.|..........+ .+...+.++.+... |+..+-+-=|.| -++..++.+....+++...++ +.+|
T Consensus 131 ~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~---------g~~~i~l~DT~G-~~~P~~v~~~v~~l~~~~~~~--i~ig 198 (345)
T 1nvm_A 131 NLGMDTVGFLMMSHMIPAEKLAEQGKLMESY---------GATCIYMADSGG-AMSMNDIRDRMRAFKAVLKPE--TQVG 198 (345)
T ss_dssp HHTCEEEEEEESTTSSCHHHHHHHHHHHHHH---------TCSEEEEECTTC-CCCHHHHHHHHHHHHHHSCTT--SEEE
T ss_pred HHCCCCCEEEECCCCCCHHHHHHHHHHHHHC---------CCCEEEECCCCC-CCCHHHHHHHHHHHHHHCCCC--CCCE
T ss_conf 8266300022025567635677899999843---------970466235334-668799999999999862775--4421
Q ss_pred EEECCCCCCE
Q ss_conf 5313465754
Q gi|254781176|r 300 ATFDEALEGV 309 (502)
Q Consensus 300 ~~~d~~~~~~ 309 (502)
...-.+++--
T Consensus 199 ~H~Hnd~GlA 208 (345)
T 1nvm_A 199 MHAHHNLSLG 208 (345)
T ss_dssp EECBCTTSCH
T ss_pred EEECCCCCCH
T ss_conf 5745886829
No 351
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural genomics, JCSG, PSI, protein structure initiative; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=21.98 E-value=27 Score=12.50 Aligned_cols=33 Identities=27% Similarity=0.314 Sum_probs=18.5
Q ss_pred CCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEEC
Q ss_conf 989999803676667407899999998649849999504
Q gi|254781176|r 99 THMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTK 137 (502)
Q Consensus 99 ~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~ 137 (502)
.+.|+| .|. |+.|. ..+.+|+.++.-++.+++.
T Consensus 196 ~~~vlv-~G~-G~vG~----~~~~la~~~~~~~v~v~~~ 228 (380)
T 1vj0_A 196 GKTVVI-QGA-GPLGL----FGVVIARSLGAENVIVIAG 228 (380)
T ss_dssp TCEEEE-ECC-SHHHH----HHHHHHHHTTBSEEEEEES
T ss_pred CCEEEE-CCC-CCHHH----HHHHHHHHCCCCEEEEEEC
T ss_conf 999999-488-72437----9999998606863999979
No 352
>1vht_A Dephospho-COA kinase; structural genomics, transferase; HET: BA3; 1.59A {Escherichia coli} SCOP: c.37.1.1 PDB: 1vhl_A* 1viy_A 1t3h_A 1n3b_A
Probab=21.96 E-value=27 Score=12.50 Aligned_cols=26 Identities=23% Similarity=0.551 Sum_probs=15.3
Q ss_pred CCCCCCCCCHHHHHHHHHHHCCCEEEE
Q ss_conf 367666740789999999864984999
Q gi|254781176|r 107 GMGGGTGTGAAPIIAKIARNKGVLTVG 133 (502)
Q Consensus 107 g~gggtgtg~~p~ia~~a~~~~~~~~~ 133 (502)
|+-||.|+|=+- ||++.+++|+-++.
T Consensus 8 gItG~igSGKSt-va~~l~~~G~~vid 33 (218)
T 1vht_A 8 ALTGGIGSGKST-VANAFADLGINVID 33 (218)
T ss_dssp EEECCTTSCHHH-HHHHHHHTTCEEEE
T ss_pred EEECCCCCCHHH-HHHHHHHCCCCEEE
T ss_conf 987988787999-99999987991998
No 353
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=21.95 E-value=27 Score=12.49 Aligned_cols=33 Identities=9% Similarity=-0.023 Sum_probs=17.6
Q ss_pred HHCCCCCCCCHHHHHHHHCCCCEEEEEEEECCC
Q ss_conf 516655558987878764158658998761486
Q gi|254781176|r 204 MIKEGLINLDFADVRSVMRNMGRAMMGTGEASG 236 (502)
Q Consensus 204 i~~~g~in~df~d~~~v~~~~g~a~~g~g~~~g 236 (502)
|...+-+.--...+...|+.+|+-++-+|...+
T Consensus 162 I~v~~a~~~ip~~l~~qLk~GGrLV~pv~~~~~ 194 (235)
T 1jg1_A 162 IIVTAGAPKIPEPLIEQLKIGGKLIIPVGSYHL 194 (235)
T ss_dssp EEECSBBSSCCHHHHHTEEEEEEEEEEECSSSS
T ss_pred EEEECCHHHCCHHHHHHCCCCCEEEEEECCCCC
T ss_conf 676146554349999846889599999863786
No 354
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=21.92 E-value=27 Score=12.49 Aligned_cols=31 Identities=23% Similarity=0.344 Sum_probs=24.3
Q ss_pred CCCEEEEEEECCCHHHHHHHHHHCCCCCCEEE
Q ss_conf 38617999966814799999998589984499
Q gi|254781176|r 13 LKPRITVFGVGGGGGNAVNNMVSSGLQGVNFV 44 (502)
Q Consensus 13 ~~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~ 44 (502)
-|.||.|||=|=+|+.+--+|.+.|.+ |-.+
T Consensus 5 ~~~~V~IIGaGi~G~s~A~~La~~G~~-V~vl 35 (363)
T 1c0p_A 5 SQKRVVVLGSGVIGLSSALILARKGYS-VHIL 35 (363)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCE-EEEE
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCC-EEEE
T ss_conf 999899989589999999999978993-8999
No 355
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta- aspartate methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum 3D7}
Probab=21.91 E-value=27 Score=12.49 Aligned_cols=116 Identities=12% Similarity=0.164 Sum_probs=54.0
Q ss_pred HHCCCCEEEEEECCCCCCCCCH-HHHHHHHHHH---CCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 7269989999803676667407-8999999986---49849999504300040678888999999999863335450278
Q gi|254781176|r 95 MLDKTHMCFVTAGMGGGTGTGA-APIIAKIARN---KGVLTVGVVTKPFHFEGSRRMRVAESGIEALQETVDTLIVIPNQ 170 (502)
Q Consensus 95 ~~~~~~~~~~~ag~gggtgtg~-~p~ia~~a~~---~~~~~~~~v~~pf~~eg~~r~~~a~~~~~~l~~~~d~~i~i~n~ 170 (502)
.|+..+-|.-+ |||||. +-++|+++.. .+..+++|=..| ..++.+.+.|++..-..+-+.|=
T Consensus 77 ~l~~g~~VLeI-----GtGsGY~ta~la~~~~~l~~~~g~V~~iE~~~---------~l~~~a~~~l~~~~~~~~~~~nv 142 (227)
T 2pbf_A 77 VLKPGSRAIDV-----GSGSGYLTVCMAIKMNVLENKNSYVIGLERVK---------DLVNFSLENIKRDKPELLKIDNF 142 (227)
T ss_dssp TSCTTCEEEEE-----SCTTSHHHHHHHHHTTTTTCTTCEEEEEESCH---------HHHHHHHHHHHHHCGGGGSSTTE
T ss_pred HCCCCCEEEEE-----CCCCCHHHHHHHHHHHHHCCCCCEEEEEEECH---------HHHHHHHHHHHHCCHHHHCCCCE
T ss_conf 47998869983-----79973999999999765224565389997059---------99999999998510444155758
Q ss_pred HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEEEEEEC
Q ss_conf 8874136653189997446799999988888765166555589878787641586589987614
Q gi|254781176|r 171 NLFRIANDKTTFADAFSMADQVLYSGVSCITDLMIKEGLINLDFADVRSVMRNMGRAMMGTGEA 234 (502)
Q Consensus 171 ~l~~~~~~~~~~~~af~~~d~~l~~~v~~i~~~i~~~g~in~df~d~~~v~~~~g~a~~g~g~~ 234 (502)
.+.. ++ +|....+ ...-.+--|.|...+-+.--...+..-|+.+|.-++=+|..
T Consensus 143 ~~~~--gd------~~~~~~~--g~~~~~pfD~I~v~~a~~~iP~~l~~qL~~gGrLv~pv~~~ 196 (227)
T 2pbf_A 143 KIIH--KN------IYQVNEE--EKKELGLFDAIHVGASASELPEILVDLLAENGKLIIPIEED 196 (227)
T ss_dssp EEEE--CC------GGGCCHH--HHHHHCCEEEEEECSBBSSCCHHHHHHEEEEEEEEEEEEET
T ss_pred EEEE--CC------CCCCCCC--CCCCCCCCCEEEEEECHHHHHHHHHHHCCCCCEEEEEECCC
T ss_conf 9997--77------3201255--78767882479994043564899999668897899998888
No 356
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme MNMG; 5-carboxymethylaminomethyl uridine, wobble uridine, FAD, FAD-binding protein; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=21.78 E-value=27 Score=12.47 Aligned_cols=35 Identities=26% Similarity=0.312 Sum_probs=30.6
Q ss_pred CEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCH
Q ss_conf 617999966814799999998589984499982557
Q gi|254781176|r 15 PRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDA 50 (502)
Q Consensus 15 ~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~ 50 (502)
=-+.|||=|=|||-|--.+-+.|+. |.++-++.|.
T Consensus 28 ~dViVIGgGlAG~EAA~~~Ar~G~~-v~L~em~~~~ 62 (637)
T 2zxi_A 28 FDVVVIGGGHAGIEAALAAARMGAK-TAMFVLNADT 62 (637)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCC-EEEEESCGGG
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCC-EEEEECCHHH
T ss_conf 8889989878999999999957998-7999727577
No 357
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=21.73 E-value=27 Score=12.46 Aligned_cols=120 Identities=14% Similarity=0.205 Sum_probs=62.1
Q ss_pred CCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 86179999668147999999985899844999825578855189970485155425567888883899999997299999
Q gi|254781176|r 14 KPRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDAQALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAEECIDEIT 93 (502)
Q Consensus 14 ~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~~~~i~ 93 (502)
+.||.+||.|..|......+.+.|.. | ..+ +..+.+.. ++.-+ |-. |.. ..-..++.
T Consensus 6 ~m~I~iIG~G~~g~~la~~l~~~G~~-V--~~~-~~~e~~~~--adlvi-l~v-----------~~~-----~~v~~~l~ 62 (232)
T 3dfu_A 6 RLRVGIFDDGSSTVNMAEKLDSVGHY-V--TVL-HAPEDIRD--FELVV-IDA-----------HGV-----EGYVEKLS 62 (232)
T ss_dssp CCEEEEECCSCCCSCHHHHHHHTTCE-E--EEC-SSGGGGGG--CSEEE-ECS-----------SCH-----HHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCE-E--EEE-CCHHHCCC--CCEEE-EEC-----------CCH-----HHHHHHHH
T ss_conf 67899989788999999999978997-9--996-88667036--98999-958-----------703-----99999986
Q ss_pred HHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEE-ECCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 972699899998036766674078999999986498499995-0430004067888899999999986333
Q gi|254781176|r 94 EMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVV-TKPFHFEGSRRMRVAESGIEALQETVDT 163 (502)
Q Consensus 94 ~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v-~~pf~~eg~~r~~~a~~~~~~l~~~~d~ 163 (502)
..+....+|+-++| +++. .+. +.....|+.++++- -.++.+-+......+.+-++.|-+.+-.
T Consensus 63 ~~~~~~~~v~~~s~---~~~~---~~l-~~~~~~g~~~~~~hP~~~~~~~~~~~~~~~~~~~~~l~~~lG~ 126 (232)
T 3dfu_A 63 AFARRGQMFLHTSL---THGI---TVM-DPLETSGGIVMSAHPIGQDRWVASALDELGETIVGLLVGELGG 126 (232)
T ss_dssp TTCCTTCEEEECCS---SCCG---GGG-HHHHHTTCEEEEEEEEETTEEEEEESSHHHHHHHHHHHHHTTC
T ss_pred HHCCCCCEEEEECC---CCCH---HHH-HHHHCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
T ss_conf 51578955885166---4208---999-8875279815740677544452013678899999999999399
No 358
>2c31_A Oxalyl-COA decarboxylase; oxalate, thiamin diphosphate, flavoprotein, lyase, thiamine pyrophosphate; HET: TZD ADP; 1.73A {Oxalobacter formigenes} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2ji6_A* 2ji7_A* 2ji8_A* 2ji9_A* 2jib_A*
Probab=21.73 E-value=27 Score=12.46 Aligned_cols=14 Identities=29% Similarity=0.325 Sum_probs=7.4
Q ss_pred EEEEECCCHHHHHH
Q ss_conf 99996681479999
Q gi|254781176|r 18 TVFGVGGGGGNAVN 31 (502)
Q Consensus 18 ~v~g~gg~g~n~~~ 31 (502)
.|||+-|..++.+-
T Consensus 27 ~vf~~pG~~~~~l~ 40 (568)
T 2c31_A 27 TMYGVVGIPITNLA 40 (568)
T ss_dssp EEEECCCTTTHHHH
T ss_pred EEEEECCCCHHHHH
T ss_conf 99993793469999
No 359
>1tll_A Nitric-oxide synthase, brain; reductase module, FMN, FAD, NADP+, oxidoreductase; HET: FMN FAD NAP; 2.30A {Rattus norvegicus} SCOP: b.43.4.1 c.23.5.2 c.25.1.4
Probab=21.60 E-value=16 Score=14.17 Aligned_cols=30 Identities=13% Similarity=0.093 Sum_probs=14.5
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 318999744679999998888876516655558
Q gi|254781176|r 180 TTFADAFSMADQVLYSGVSCITDLMIKEGLINL 212 (502)
Q Consensus 180 ~~~~~af~~~d~~l~~~v~~i~~~i~~~g~in~ 212 (502)
.++.+.| +.|+.+.+..+.+....+..++.
T Consensus 180 ~~~e~~~---~~W~~~~~~~l~~~~~~~~~~~~ 209 (688)
T 1tll_A 180 CGQEEAF---RTWAKKVFKAACDVFCVGDDVNI 209 (688)
T ss_dssp TTHHHHH---HHHHHHHHHHHHHHHTCCSSSCC
T ss_pred CCCHHHH---HHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 7818999---99999999999875287643343
No 360
>1xxx_A DHDPS, dihydrodipicolinate synthase; DAPA, RV2753C, lysine biosynthesis, structural genomics, PSI protein structure initiative; 2.28A {Mycobacterium tuberculosis} SCOP: c.1.10.1
Probab=21.56 E-value=28 Score=12.44 Aligned_cols=68 Identities=18% Similarity=0.244 Sum_probs=36.4
Q ss_pred HHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 72699899998036766674078999999986498499995043000406788889999999998633354502
Q gi|254781176|r 95 MLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPFHFEGSRRMRVAESGIEALQETVDTLIVIP 168 (502)
Q Consensus 95 ~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf~~eg~~r~~~a~~~~~~l~~~~d~~i~i~ 168 (502)
...+.- .+.+|- +++.|--+=-.|+.|++.|+--+ .|..||.|--. -....+-..++.+.+|.=|++-
T Consensus 79 ~~~~~~--~vi~gv-~~~s~~~~i~~a~~a~~~Gad~i-~v~~P~~~~~~--~~~i~~~~~~ia~~~~~pi~iy 146 (303)
T 1xxx_A 79 AVGDRA--RVIAGA-GTYDTAHSIRLAKACAAEGAHGL-LVVTPYYSKPP--QRGLQAHFTAVADATELPMLLY 146 (303)
T ss_dssp HHTTTS--EEEEEC-CCSCHHHHHHHHHHHHHHTCSEE-EEECCCSSCCC--HHHHHHHHHHHHTTCSSCEEEE
T ss_pred HHCCCC--CEEEEC-CCCCHHHHHHHHHHHHHHCCCEE-EEECCCCCCCC--HHHHHHHHHHHHHHCCCCEEEE
T ss_conf 928987--489845-76668999999999997169869-99457578989--9999999999997169988999
No 361
>2f6r_A COA synthase, bifunctional coenzyme A synthase; 18044849, bifunctional coenzyme A synthase (COA synthase), structural genomics; HET: ACO UNL; 1.70A {Mus musculus}
Probab=21.56 E-value=28 Score=12.44 Aligned_cols=31 Identities=19% Similarity=0.460 Sum_probs=21.7
Q ss_pred CCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEE
Q ss_conf 9899998036766674078999999986498499
Q gi|254781176|r 99 THMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTV 132 (502)
Q Consensus 99 ~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~ 132 (502)
..|. +-|+-||.|+|=+-|. ++.+++|+-++
T Consensus 73 ~~~~--IIGLTGgigSGKStva-~~L~~~G~~vi 103 (281)
T 2f6r_A 73 SGLY--VLGLTGISGSGKSSVA-QRLKNLGAYII 103 (281)
T ss_dssp TTCE--EEEEEECTTSCHHHHH-HHHHHHTCEEE
T ss_pred CCCE--EEEEECCCCCCHHHHH-HHHHHCCCCEE
T ss_conf 9998--9998788752199999-99998799699
No 362
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genomics, NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus VF5} PDB: 2z95_A*
Probab=21.54 E-value=28 Score=12.44 Aligned_cols=94 Identities=12% Similarity=0.080 Sum_probs=51.0
Q ss_pred EEEEEEECC-CHHHHHHHHHHCCCCCCEEEEECC-----CHHHHHHCCCCEEEEE-CCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 179999668-147999999985899844999825-----5788551899704851-554255678888838999999972
Q gi|254781176|r 16 RITVFGVGG-GGGNAVNNMVSSGLQGVNFVVANT-----DAQALMMSKAKQIIQL-GSGITEGLGAGSHPEVGRAAAEEC 88 (502)
Q Consensus 16 ~i~v~g~gg-~g~n~~~~~~~~~~~~~~~~~~nt-----d~~~l~~~~~~~~~~~-g~~~~~g~g~g~~~~~g~~~a~~~ 88 (502)
||.|.|..| -|.+.+.+|.+.|. +.++++- -...|.....+.++.+ =..++ +
T Consensus 5 kilVTG~tGfIGs~lv~~Ll~~g~---~V~~~dr~~~~~~~~~~~~~~~~~~~~~v~~Di~------------------d 63 (345)
T 2z1m_A 5 RALITGIRGQDGAYLAKLLLEKGY---EVYGADRRSGEFASWRLKELGIENDVKIIHMDLL------------------E 63 (345)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC---EEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTT------------------C
T ss_pred EEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCCCCCCHHHHHHHCCCCCCEEEEEECC------------------C
T ss_conf 899989987899999999997839---8999989997643455887432689779980367------------------8
Q ss_pred HHHHHHHHC--CCCEEEEEECCCCCCC------------CCHHHHHHHHHHHCCCE
Q ss_conf 999999726--9989999803676667------------40789999999864984
Q gi|254781176|r 89 IDEITEMLD--KTHMCFVTAGMGGGTG------------TGAAPIIAKIARNKGVL 130 (502)
Q Consensus 89 ~~~i~~~~~--~~~~~~~~ag~gggtg------------tg~~p~ia~~a~~~~~~ 130 (502)
.+.+...+. ..|.||-+|+..+..- ..++--+.+.|++.++.
T Consensus 64 ~~~~~~~~~~~~~d~V~hlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~a~~~~~~~ 119 (345)
T 2z1m_A 64 FSNIIRTIEKVQPDEVYNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPD 119 (345)
T ss_dssp HHHHHHHHHHHCCSEEEECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHCCCCEEEEECCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 57724556237971999735337616777564888999999999999999984999
No 363
>3dme_A Conserved exported protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=21.54 E-value=28 Score=12.44 Aligned_cols=28 Identities=21% Similarity=0.260 Sum_probs=20.7
Q ss_pred EEEEEEECCCHHHHHHHHHHCCCCCCEEE
Q ss_conf 17999966814799999998589984499
Q gi|254781176|r 16 RITVFGVGGGGGNAVNNMVSSGLQGVNFV 44 (502)
Q Consensus 16 ~i~v~g~gg~g~n~~~~~~~~~~~~~~~~ 44 (502)
-+.|||=|=+||-+--.+.+.|.+ |-++
T Consensus 6 DvvIIGaGi~G~s~A~~La~~G~~-V~li 33 (369)
T 3dme_A 6 DCIVIGAGVVGLAIARALAAGGHE-VLVA 33 (369)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCC-EEEE
T ss_pred CEEEECCCHHHHHHHHHHHHCCCC-EEEE
T ss_conf 899999079999999999878896-8999
No 364
>3cfy_A Putative LUXO repressor protein; structural genomics, unknown function, uncharacterized protein, signal receiver domain; 2.50A {Vibrio parahaemolyticus rimd 2210633}
Probab=21.40 E-value=28 Score=12.42 Aligned_cols=108 Identities=19% Similarity=0.204 Sum_probs=66.5
Q ss_pred CCCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHH--CCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 3861799996681479999999858998449998255788551--89970485155425567888883899999997299
Q gi|254781176|r 13 LKPRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDAQALMM--SKAKQIIQLGSGITEGLGAGSHPEVGRAAAEECID 90 (502)
Q Consensus 13 ~~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~~~l~~--~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~~~ 90 (502)
.||||.||-=--.=+..+.++... .|.+...+.+=.++|.. ...+.-|++.-....+- ..+-..
T Consensus 3 mk~rILIVDDd~~~~~~l~~~L~~--~g~~v~~a~~~~eal~~l~~~~pdlillD~~mp~~~------------G~~l~~ 68 (137)
T 3cfy_A 3 LRPRVLLVEDSTSLAILYKQYVKD--EPYDIFHVETGRDAIQFIERSKPQLIILDLKLPDMS------------GEDVLD 68 (137)
T ss_dssp CCCEEEEECSCTTHHHHHHHHTTT--SSSEEEEESSHHHHHHHHHHHCCSEEEECSBCSSSB------------HHHHHH
T ss_pred CCCEEEEEECCHHHHHHHHHHHHH--CCCEEEEECCHHHHHHHHHHCCCCEEEEECCCCCCC------------HHHHHH
T ss_conf 997699997999999999999998--799999989999999999847999999838999998------------899999
Q ss_pred HHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCH
Q ss_conf 999972699899998036766674078999999986498499995043000406
Q gi|254781176|r 91 EITEMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPFHFEGS 144 (502)
Q Consensus 91 ~i~~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf~~eg~ 144 (502)
.|++.-....++++|+ . + .+..+.-|.+.|+ ..++++||+.+--
T Consensus 69 ~ir~~~~~~piI~lt~-~------~-~~~~~~~~~~~Ga--~dyl~KP~~~~~L 112 (137)
T 3cfy_A 69 WINQNDIPTSVIIATA-H------G-SVDLAVNLIQKGA--EDFLEKPINADRL 112 (137)
T ss_dssp HHHHTTCCCEEEEEES-S------C-CHHHHHHHHHTTC--SEEEESSCCHHHH
T ss_pred HHHHHCCCCCEEEEEC-C------C-CHHHHHHHHHCCC--CEEEECCCCHHHH
T ss_conf 9997489984899987-7------9-9999999986798--6899898999999
No 365
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=21.30 E-value=28 Score=12.40 Aligned_cols=41 Identities=29% Similarity=0.311 Sum_probs=28.0
Q ss_pred EEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCH
Q ss_conf 9998036766674078999999986498499995043000406
Q gi|254781176|r 102 CFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPFHFEGS 144 (502)
Q Consensus 102 ~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf~~eg~ 144 (502)
+.|.+|. |++.|-.+--.|+.|++.|+-.+.+ ..||.+-..
T Consensus 71 ~~vi~gv-~~~s~~~~i~~a~~a~~~Gad~i~v-~pP~~~~~~ 111 (291)
T 3a5f_A 71 IPVIAGT-GSNNTAASIAMSKWAESIGVDGLLV-ITPYYNKTT 111 (291)
T ss_dssp SCEEEEC-CCSSHHHHHHHHHHHHHTTCSEEEE-ECCCSSCCC
T ss_pred CEEEEEE-CCCCHHHHHHHHHHHHHCCCCEEEE-CCCCCCCCC
T ss_conf 5389876-7851999999999999708997998-188778899
No 366
>2o4u_X Dimeric dihydrodiol dehydrogenase; NADP-binding rossmann-fold domain, predominantly anti- parallel beta sheet, oxidoreductase; 2.00A {Macaca fascicularis} PDB: 2o48_X 2poq_X*
Probab=21.16 E-value=28 Score=12.38 Aligned_cols=115 Identities=12% Similarity=0.094 Sum_probs=63.3
Q ss_pred CEEEEEEECCCHHHHHHHHHHCCCCCCEEEEE-CCCHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 61799996681479999999858998449998-25578855189970485155425567888883899999997299999
Q gi|254781176|r 15 PRITVFGVGGGGGNAVNNMVSSGLQGVNFVVA-NTDAQALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAEECIDEIT 93 (502)
Q Consensus 15 ~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~-ntd~~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~~~~i~ 93 (502)
.|+-|||.|..|...+..+....-.+++++++ +.+...+........+ .. -...+.
T Consensus 3 ik~giIG~G~~g~~~~~~l~~~~~~~~~l~~v~d~~~~~~~~~a~~~~~---~~--------------------~~~~~~ 59 (334)
T 2o4u_X 3 LRWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAARDLSRAKEFAQKHDI---PK--------------------AYGSYE 59 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSCTTTEEEEEEECSSHHHHHHHHHHHTC---SE--------------------EESSHH
T ss_pred EEEEEECCCHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHCCC---CC--------------------EECCHH
T ss_conf 6799999939999999999858588859999987999999999998399---82--------------------548999
Q ss_pred HHHC--CCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9726--99899998036766674078999999986498499995043000406788889999999998633354
Q gi|254781176|r 94 EMLD--KTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPFHFEGSRRMRVAESGIEALQETVDTLI 165 (502)
Q Consensus 94 ~~~~--~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf~~eg~~r~~~a~~~~~~l~~~~d~~i 165 (502)
++|+ +.|+||| .|-+..-+-+++.|=+.|.- .++-+|+... ...|++ |.++.+.....+
T Consensus 60 ~ll~~~~iD~v~I------~tp~~~h~~~~~~al~~gkh--Vl~EKP~~~~----~~e~~~-l~~~a~~~~~~~ 120 (334)
T 2o4u_X 60 ELAKDPNVEVAYV------GTQHPQHKAAVMLCLAAGKA--VLCEKPMGVN----AAEVRE-MVTEARSRGLFL 120 (334)
T ss_dssp HHHTCTTCSEEEE------CCCGGGHHHHHHHHHHTTCE--EEECSSSSSS----HHHHHH-HHHHHHHHTCCE
T ss_pred HHHCCCCCCEEEE------ECCCCCCHHHHHHHHHCCCE--EEECCCCCCC----CCCHHH-HHHHHHHCCCCE
T ss_conf 9956999988999------05654114778999986991--8846986212----221023-444454235421
No 367
>3en0_A Cyanophycinase; serine protease, beta peptide specific, hydrolase, protease; 1.50A {Synechocystis SP}
Probab=21.12 E-value=28 Score=12.38 Aligned_cols=69 Identities=12% Similarity=0.069 Sum_probs=33.8
Q ss_pred HHHHHHCC--CCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99997269--989999803676667407899999998649849999504300040678888999999999863335450
Q gi|254781176|r 91 EITEMLDK--THMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPFHFEGSRRMRVAESGIEALQETVDTLIVI 167 (502)
Q Consensus 91 ~i~~~~~~--~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf~~eg~~r~~~a~~~~~~l~~~~d~~i~i 167 (502)
++.+.-.+ +.+|||.+. ++..........++.+.+|+-.|.+ +++.. |..--...+.+.-..+|.+.+-
T Consensus 47 ~~i~lagg~~~~I~viptA--S~~~~~~~~~y~~~f~~lG~~~v~~--l~i~~----r~~A~~~~~~~~l~~Ad~I~~~ 117 (291)
T 3en0_A 47 TFWSRSGGNDAIIGIIPSA--SREPLLIGERYQTIFSDMGVKELKV--LDIRD----RAQGDDSGYRLFVEQCTGIFMT 117 (291)
T ss_dssp HHHHHTTGGGCEEEEECTT--CSSHHHHHHHHHHHHHHHCCSEEEE--CCCCS----GGGGGCHHHHHHHHHCSEEEEC
T ss_pred HHHHHHCCCCCEEEEEECC--CCCHHHHHHHHHHHHHHCCCCEEEE--EECCC----HHHCCCHHHHHHHHCCCEEEEC
T ss_conf 9999839998669999698--7883899999999999859965899--94468----3664888999998519999994
No 368
>3c3d_A 2-phospho-L-lactate transferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FO1; 2.50A {Methanosarcina mazei GO1} PDB: 2ffe_A* 3c3e_A* 3cgw_A
Probab=21.11 E-value=28 Score=12.41 Aligned_cols=17 Identities=35% Similarity=0.593 Sum_probs=9.4
Q ss_pred CCCCCCCCHHHHHHHHHHHC
Q ss_conf 67666740789999999864
Q gi|254781176|r 108 MGGGTGTGAAPIIAKIARNK 127 (502)
Q Consensus 108 ~gggtgtg~~p~ia~~a~~~ 127 (502)
+|||||. +.+++-.|+.
T Consensus 4 ~gGGtG~---~~ll~gl~~~ 20 (311)
T 3c3d_A 4 FSGGTGT---PKLLDGLKEI 20 (311)
T ss_dssp EECTTHH---HHHHHHHTTT
T ss_pred EECCCCH---HHHHHHHHHH
T ss_conf 9165128---9999999861
No 369
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=21.10 E-value=28 Score=12.37 Aligned_cols=103 Identities=11% Similarity=0.163 Sum_probs=59.4
Q ss_pred EEEEEEECC-CHHHHHHHHHHCCCCCCEEEEECCCHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 179999668-1479999999858998449998255788551899704851554255678888838999999972999999
Q gi|254781176|r 16 RITVFGVGG-GGGNAVNNMVSSGLQGVNFVVANTDAQALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAEECIDEITE 94 (502)
Q Consensus 16 ~i~v~g~gg-~g~n~~~~~~~~~~~~~~~~~~ntd~~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~~~~i~~ 94 (502)
||.|.|--| -|.+.+.++.+.|.. .+++.-......... ....++ |.. ..+...
T Consensus 4 kILItGatGfIG~~l~~~L~~~g~~---v~~~~r~~~~~~~~~--~~~~~~-----------d~~---------~~~~~~ 58 (311)
T 3m2p_A 4 KIAVTGGTGFLGQYVVESIKNDGNT---PIILTRSIGNKAIND--YEYRVS-----------DYT---------LEDLIN 58 (311)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCCC-----C--CEEEEC-----------CCC---------HHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCE---EEEEECCCCCCCCCC--CEEEEC-----------CHH---------HHHHHH
T ss_conf 4999899978999999999978698---999968988655566--327972-----------603---------489998
Q ss_pred HHCCCCEEEEEECCCCCCCCCH--------HHHHHHHHHHCCCEEEEEEECCCCCCC
Q ss_conf 7269989999803676667407--------899999998649849999504300040
Q gi|254781176|r 95 MLDKTHMCFVTAGMGGGTGTGA--------APIIAKIARNKGVLTVGVVTKPFHFEG 143 (502)
Q Consensus 95 ~~~~~~~~~~~ag~gggtgtg~--------~p~ia~~a~~~~~~~~~~v~~pf~~eg 143 (502)
.+.+.|.||-+|+..+....=. +--+.+.|++.++-.+.+++....|.+
T Consensus 59 ~~~~~d~Vih~Aa~~~~~~~~~~~~~nv~~t~nll~a~~~~~~k~~i~~Ss~~vy~~ 115 (311)
T 3m2p_A 59 QLNDVDAVVHLAATRGSQGKISEFHDNEILTQNLYDACYENNISNIVYASTISAYSD 115 (311)
T ss_dssp HTTTCSEEEECCCCCCSSSCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCC
T ss_pred HHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCC
T ss_conf 761998999844300245851004459999999999999722433896475410037
No 370
>2hue_C Histone H4; mini beta sheet, elongated beta sandwhich, DNA binding protein; 1.70A {Xenopus laevis} SCOP: a.22.1.1 PDB: 3nqj_B 1aoi_B 3kwq_B* 1hio_D
Probab=21.08 E-value=28 Score=12.37 Aligned_cols=41 Identities=17% Similarity=0.194 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEEEEE
Q ss_conf 99999888887651665555898787876415865899876
Q gi|254781176|r 192 VLYSGVSCITDLMIKEGLINLDFADVRSVMRNMGRAMMGTG 232 (502)
Q Consensus 192 ~l~~~v~~i~~~i~~~g~in~df~d~~~v~~~~g~a~~g~g 232 (502)
.|.+.++-.+.....-+--.|.-.||..+|+..|..++|+|
T Consensus 43 ~l~~I~~~a~~~a~hakRKTvt~~DV~~ALkR~g~plyGfg 83 (84)
T 2hue_C 43 FLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFG 83 (84)
T ss_dssp HHHHHHHHHHHHHHHTTCSEECHHHHHHHTTTTCEEEESCC
T ss_pred HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCC
T ss_conf 99999999999986618864669999999997798789999
No 371
>3kp1_E D-ornithine aminomutase S component; 5 aminomutase (OAM), metal binding protein; HET: PLP B12 5AD; 2.01A {Clostridium sticklandii} PDB: 3kow_E* 3koy_E* 3koz_E* 3kp0_E* 3kox_E*
Probab=20.94 E-value=28 Score=12.35 Aligned_cols=12 Identities=50% Similarity=0.642 Sum_probs=4.0
Q ss_pred HHHHHHHHHHHC
Q ss_conf 789999999864
Q gi|254781176|r 116 AAPIIAKIARNK 127 (502)
Q Consensus 116 ~~p~ia~~a~~~ 127 (502)
|..||-++||+.
T Consensus 81 AGhvV~k~ak~~ 92 (121)
T 3kp1_E 81 AGHIVYKIAKEK 92 (121)
T ss_dssp HHHHHHHHHHHT
T ss_pred CCHHHHHHHHHC
T ss_conf 553223579762
No 372
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=20.89 E-value=28 Score=12.34 Aligned_cols=111 Identities=14% Similarity=0.076 Sum_probs=59.9
Q ss_pred HHCCCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 54386179999668147999999985899844999825578855189970485155425567888883899999997299
Q gi|254781176|r 11 TELKPRITVFGVGGGGGNAVNNMVSSGLQGVNFVVANTDAQALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAEECID 90 (502)
Q Consensus 11 ~~~~~~i~v~g~gg~g~n~~~~~~~~~~~~~~~~~~ntd~~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~~~ 90 (502)
..-+-||.++|.|.-|..++..+ ..+.+++= | ++..+. .+ .....+
T Consensus 9 ~~~~mrV~iiG~G~~G~~v~~~~------~~~~v~v~-~-----r~~~~~---------~~--~~~~~~----------- 54 (253)
T 1j5p_A 9 HHHHMTVLIIGMGNIGKKLVELG------NFEKIYAY-D-----RISKDI---------PG--VVRLDE----------- 54 (253)
T ss_dssp --CCCEEEEECCSHHHHHHHHHS------CCSEEEEE-C-----SSCCCC---------SS--SEECSS-----------
T ss_pred CCCCCEEEEECCCHHHHHHHHHH------HHCCEEEE-E-----CCCCCC---------CC--CCCHHH-----------
T ss_conf 67778899998788999999986------10847999-2-----577766---------67--578788-----------
Q ss_pred HHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999726998999980367666740789999999864984999950430004067888899999999986333545027
Q gi|254781176|r 91 EITEMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPFHFEGSRRMRVAESGIEALQETVDTLIVIPN 169 (502)
Q Consensus 91 ~i~~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf~~eg~~r~~~a~~~~~~l~~~~d~~i~i~n 169 (502)
+ ....+.|+|+.+++ ..+..-+++.|-+.|+-+|..-|..+..++.. +-|.++.+.....++++-
T Consensus 55 -~-~~~~~~DvVve~~~------~~~~~~~~~~al~~g~~vv~~s~g~~~~~~~~------~~l~~~a~~~~~~i~~~~ 119 (253)
T 1j5p_A 55 -F-QVPSDVSTVVECAS------PEAVKEYSLQILKNPVNYIIISTSAFADEVFR------ERFFSELKNSPARVFFPS 119 (253)
T ss_dssp -C-CCCTTCCEEEECSC------HHHHHHHHHHHTTSSSEEEECCGGGGGSHHHH------HHHHHHHHTCSCEEECCC
T ss_pred -H-HCCCCCCEEEECCC------CHHHHHHHHHHHHCCCCEEEECCCCCCCCCHH------HHHHHHHHHCCCEEEECC
T ss_conf -6-16579989998588------07999999999973997999836424573159------999999997299399556
No 373
>3etn_A Putative phosphosugar isomerase involved in capsule formation; YP_209877.1, structural genomics; HET: MSE CMK; 1.70A {Bacteroides fragilis nctc 9343}
Probab=20.67 E-value=29 Score=12.31 Aligned_cols=96 Identities=19% Similarity=0.330 Sum_probs=55.7
Q ss_pred CCEEEEEEECCCHHHHH---HHHHHCCCCCCEEEEE-CCCHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 86179999668147999---9999858998449998-2557885518997048515542556788888389999999729
Q gi|254781176|r 14 KPRITVFGVGGGGGNAV---NNMVSSGLQGVNFVVA-NTDAQALMMSKAKQIIQLGSGITEGLGAGSHPEVGRAAAEECI 89 (502)
Q Consensus 14 ~~~i~v~g~gg~g~n~~---~~~~~~~~~~~~~~~~-ntd~~~l~~~~~~~~~~~g~~~~~g~g~g~~~~~g~~~a~~~~ 89 (502)
+.||.++|+|+.|-=+- .++.+.|+. .++. +++.++....
T Consensus 59 ~grI~~~GvG~S~~vA~~~~~kl~~lG~~---~~~~~d~~~~~~~~~--------------------------------- 102 (220)
T 3etn_A 59 KGKLVTSGMGKAGQIAMNIATTFCSTGIP---SVFLHPSEAQHGDLG--------------------------------- 102 (220)
T ss_dssp CCCEEEECSHHHHHHHHHHHHHHHHTTCC---EEECCTTGGGBTGGG---------------------------------
T ss_pred CCEEEEEEECHHHHHHHHHHHHHHHCCCC---CEECCCHHHHHHHHH---------------------------------
T ss_conf 99699997047999999999999983994---052781778888851---------------------------------
Q ss_pred HHHHHHHCCCCEEEEEECCCCCCCCCHHH---HHHHHHHH--CCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999726998999980367666740789---99999986--49849999504300040678888999999999863335
Q gi|254781176|r 90 DEITEMLDKTHMCFVTAGMGGGTGTGAAP---IIAKIARN--KGVLTVGVVTKPFHFEGSRRMRVAESGIEALQETVDTL 164 (502)
Q Consensus 90 ~~i~~~~~~~~~~~~~ag~gggtgtg~~p---~ia~~a~~--~~~~~~~~v~~pf~~eg~~r~~~a~~~~~~l~~~~d~~ 164 (502)
.++-.|+||+... +|-++ -++++||+ .|+-+|+|...|- . .|.+++|.+
T Consensus 103 -----~~~~~DvlI~iS~------SG~T~evi~~~~~ak~~~~~~~vI~IT~~~~---S------------~lak~aD~~ 156 (220)
T 3etn_A 103 -----ILQENDLLLLISN------SGKTREIVELTQLAHNLNPGLKFIVITGNPD---S------------PLASESDVC 156 (220)
T ss_dssp -----GCCTTCEEEEECS------SSCCHHHHHHHHHHHHHCTTCEEEEEESCTT---S------------HHHHHSSEE
T ss_pred -----CCCCCCEEEEECC------CCCCHHHHHHHHHHHHCCCCCCEEEEEECCC---C------------CCCCCCCEE
T ss_conf -----5888888999828------9986658888999874046871588860588---7------------421358878
Q ss_pred HHHHHHH
Q ss_conf 4502788
Q gi|254781176|r 165 IVIPNQN 171 (502)
Q Consensus 165 i~i~n~~ 171 (502)
+.++..+
T Consensus 157 L~~~~~~ 163 (220)
T 3etn_A 157 LSTGHPA 163 (220)
T ss_dssp EECCCCC
T ss_pred EECCCCC
T ss_conf 8679873
No 374
>3dma_A Exopolyphosphatase-related protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.25A {Bacteroides fragilis}
Probab=20.59 E-value=29 Score=12.30 Aligned_cols=55 Identities=15% Similarity=0.283 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHCCCCEEEEEECC-CCCCCCCHHHHHHHHHHHCCCEEEEEEECCC
Q ss_conf 997299999972699899998036-7666740789999999864984999950430
Q gi|254781176|r 85 AEECIDEITEMLDKTHMCFVTAGM-GGGTGTGAAPIIAKIARNKGVLTVGVVTKPF 139 (502)
Q Consensus 85 a~~~~~~i~~~~~~~~~~~~~ag~-gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf 139 (502)
+.-..+++.+.|+.++-|+|+.-. .=|=+-|++-.++.+++.+|.-+..+..-++
T Consensus 7 ~~~~~~~~~~~i~~~~~i~I~~H~npD~DalgSa~al~~~l~~~gk~~~i~~~~~~ 62 (343)
T 3dma_A 7 AQAHIDHFTKWFERADKIVIVSHVSPDGDAIGSSLGLYHFLDSQDKIVNVIVPNAF 62 (343)
T ss_dssp CHHHHHHHHHHHHHCSEEEEEECSSCCHHHHHHHHHHHHHHHHTSCEEEEEESSCC
T ss_pred HHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCC
T ss_conf 99999999999960996999828999818999999999999985994899969998
No 375
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, cytoplasm; 2.00A {Neisseria meningitidis serogroup B}
Probab=20.58 E-value=29 Score=12.30 Aligned_cols=111 Identities=15% Similarity=0.149 Sum_probs=55.1
Q ss_pred EEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
Q ss_conf 99980367666740789999999864984999950430004067888899999999986333545027888741366531
Q gi|254781176|r 102 CFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPFHFEGSRRMRVAESGIEALQETVDTLIVIPNQNLFRIANDKTT 181 (502)
Q Consensus 102 ~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf~~eg~~r~~~a~~~~~~l~~~~d~~i~i~n~~l~~~~~~~~~ 181 (502)
+.+.+|-|+ +.+--+--.|+.|++.|+-.+-+ ..||.|-.. -+...+-.+++.+.+|.=|++-|. |
T Consensus 77 ~~vi~gv~~-~s~~~~i~~a~~a~~~Gad~v~v-~pP~~~~~s--~~~i~~~~~~i~~a~~~pi~lYn~----------P 142 (297)
T 3flu_A 77 VPVIAGTGA-NNTVEAIALSQAAEKAGADYTLS-VVPYYNKPS--QEGIYQHFKTIAEATSIPMIIYNV----------P 142 (297)
T ss_dssp SCEEEECCC-SSHHHHHHHHHHHHHTTCSEEEE-ECCCSSCCC--HHHHHHHHHHHHHHCCSCEEEEEC----------H
T ss_pred CCCCCCCCC-CCHHHHHHHHHHHHHCCCCCCEE-CCCCCCCCC--HHHHHHHHHHHHHCCCCCEEEEEC----------C
T ss_conf 554567675-63999999999999829987562-588788989--999999999998547998899978----------8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCC--CCCHHHHHHHHCCCC--EEEEE
Q ss_conf 89997446799999988888765166555--589878787641586--58998
Q gi|254781176|r 182 FADAFSMADQVLYSGVSCITDLMIKEGLI--NLDFADVRSVMRNMG--RAMMG 230 (502)
Q Consensus 182 ~~~af~~~d~~l~~~v~~i~~~i~~~g~i--n~df~d~~~v~~~~g--~a~~g 230 (502)
....+.+..+.+.+-.+ +-.+ -|+. .-|+..++.+++..+ ..+++
T Consensus 143 ~~~g~~l~~e~l~~L~~-~pni---~giK~~~~d~~~~~~~~~~~~~~~~v~~ 191 (297)
T 3flu_A 143 GRTVVSMTNDTILRLAE-IPNI---VGVKEASGNIGSNIELINRAPEGFVVLS 191 (297)
T ss_dssp HHHSSCCCHHHHHHHTT-STTE---EEEEECSCCHHHHHHHHHHSCTTCEEEE
T ss_pred CCCCCCCCHHHHHHHHC-CCCE---EEEECCCCCHHHHHHHHHHCCCCEEEEC
T ss_conf 64477899999999865-8998---8885488999999999997699847835
No 376
>3nva_A CTP synthase; rossman fold, nucleotide binding, LIG; 2.50A {Sulfolobus solfataricus}
Probab=20.55 E-value=29 Score=12.29 Aligned_cols=87 Identities=17% Similarity=0.327 Sum_probs=52.5
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHH--CCCCEEEEEECCCCCCCCC-HHHHHHHHHH----HC---CCEEEEEEECCC
Q ss_conf 567888883899999997299999972--6998999980367666740-7899999998----64---984999950430
Q gi|254781176|r 70 EGLGAGSHPEVGRAAAEECIDEITEML--DKTHMCFVTAGMGGGTGTG-AAPIIAKIAR----NK---GVLTVGVVTKPF 139 (502)
Q Consensus 70 ~g~g~g~~~~~g~~~a~~~~~~i~~~~--~~~~~~~~~ag~gggtgtg-~~p~ia~~a~----~~---~~~~~~~v~~pf 139 (502)
+|-=-|....+=-.-..|=.+.|+..- .++|+|++ .+||--|-= ..|-+ +..| +. +.+-|-+.-.|+
T Consensus 105 ~G~ylG~TVQviPHiTdeIk~~i~~~~~~~~~Dv~iv--EiGGTVGDIEs~pFl-EAiRQ~~~~~g~~n~~~iHvtlvP~ 181 (535)
T 3nva_A 105 EGKYLGQTVQIIPHVTDQIKDMIRYASKINNAEITLV--EIGGTVGDIESLPFL-EAVRQLKLEEGEDNVIFVHIALVEY 181 (535)
T ss_dssp TTTTTTCCCCHHHHHHHHHHHHHHHHHHHHTCSEEEE--EECSCTTSGGGHHHH-HHHHHHHHHHCTTTEEEEEEEECCB
T ss_pred CCCCCCCEEEECCCHHHHHHHHHHHHCCCCCCCEEEE--ECCCEEEHHCCCHHH-HHHHHHHHHCCCCCEEEEEEEEECC
T ss_conf 4785786379777447899999997313689978999--558675100016899-9999998870988689999764123
Q ss_pred -CCCCHHHHHHHHHHHHHHHH
Q ss_conf -00406788889999999998
Q gi|254781176|r 140 -HFEGSRRMRVAESGIEALQE 159 (502)
Q Consensus 140 -~~eg~~r~~~a~~~~~~l~~ 159 (502)
..=|..+.+=.+.++.+|+.
T Consensus 182 l~~~gE~KTKPTQhSVk~Lr~ 202 (535)
T 3nva_A 182 LSVTGELKTKPLQHSVQELRR 202 (535)
T ss_dssp CTTTSSBCCHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHH
T ss_conf 355576467502899999997
No 377
>1dn1_A NSEC1, syntaxin binding protein 1; protein-protein complex, multi-subunit; 2.60A {Rattus norvegicus} SCOP: e.25.1.1 PDB: 3c98_A
Probab=20.47 E-value=29 Score=12.28 Aligned_cols=23 Identities=13% Similarity=-0.026 Sum_probs=13.5
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 67999999888887651665555
Q gi|254781176|r 189 ADQVLYSGVSCITDLMIKEGLIN 211 (502)
Q Consensus 189 ~d~~l~~~v~~i~~~i~~~g~in 211 (502)
....|...++++..+...-|.+.
T Consensus 165 ~~~~l~~ia~~L~sl~~~lg~~P 187 (594)
T 1dn1_A 165 KNPILERLAEQIATLCATLKEYP 187 (594)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 16999999999999999809997
No 378
>2wam_A RV2714, conserved hypothetical alanine and leucine rich protein; unknown function; 2.60A {Mycobacterium tuberculosis}
Probab=20.47 E-value=29 Score=12.28 Aligned_cols=101 Identities=16% Similarity=0.162 Sum_probs=57.5
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCC------------------------------CCCHHHHHHHHH
Q ss_conf 88838999999972999999726998999980367666------------------------------740789999999
Q gi|254781176|r 75 GSHPEVGRAAAEECIDEITEMLDKTHMCFVTAGMGGGT------------------------------GTGAAPIIAKIA 124 (502)
Q Consensus 75 g~~~~~g~~~a~~~~~~i~~~~~~~~~~~~~ag~gggt------------------------------gtg~~p~ia~~a 124 (502)
|--|+..-..-.+..-++.+.+ |..+|+...||..++ -+|++-++...+
T Consensus 149 G~EP~~~W~~fa~~vl~la~~l-gV~~vitLgg~~~~vPHTRp~~V~~~as~~el~~~~~~~~~~~~gp~Gi~g~L~~~~ 227 (351)
T 2wam_A 149 GLEPDLKWERFITAVRLLAERL-GVRQTIGLGTVPMAVPHTRPITMTAHSNNRELISDFQPSISEIQVPGSASNLLEYRM 227 (351)
T ss_dssp EECCSBCHHHHHHHHHHHHHHT-TCCEEEEEEEEEESCCTTSCCCEEEEESSGGGGTTSCCCCCSEEEECCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHC-CCCEEEEECCCCCCCCCCCCCEEEEEECCHHHHHHCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 7888447999999999999986-985899964504898876774399985889998633666553356630999999999
Q ss_pred HHCCCEEEEE-EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 8649849999-50430004067888899999999986333545027888741366
Q gi|254781176|r 125 RNKGVLTVGV-VTKPFHFEGSRRMRVAESGIEALQETVDTLIVIPNQNLFRIAND 178 (502)
Q Consensus 125 ~~~~~~~~~~-v~~pf~~eg~~r~~~a~~~~~~l~~~~d~~i~i~n~~l~~~~~~ 178 (502)
++.|+-++++ |..|..+=..---+-|..-|+.|.+..+ +.||-..|.+-+..
T Consensus 228 ~~~Gi~~i~l~a~VPhYl~~~pdP~AA~aLLe~L~~llg--l~id~~~L~e~Ae~ 280 (351)
T 2wam_A 228 AQHGHEVVGFTVHVPHYLTQTDYPAAAQALLEQVAKTGS--LQLPLAVLAEAAAE 280 (351)
T ss_dssp HHTTCCEEEEEEEEEGGGTTSCCHHHHHHHHHHHHHHHT--CCCCCHHHHHHHHH
T ss_pred HHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHC--CCCCHHHHHHHHHH
T ss_conf 977998279999778656899985999999999999878--98787899999999
No 379
>3lx3_A 6-pyruvoyl tetrahydrobiopterin synthase; PTS, PTP synthase, PTPS, metal-binding, tetrahydrobiopterin biosynthesis, folate biosynthesis; HET: XTN; 1.55A {Plasmodium vivax} PDB: 2a0s_A* 3m0n_A* 3lze_A*
Probab=20.32 E-value=29 Score=12.26 Aligned_cols=15 Identities=27% Similarity=0.744 Sum_probs=8.5
Q ss_pred CCCCCCCHHHHHHHHC
Q ss_conf 6555589878787641
Q gi|254781176|r 207 EGLINLDFADVRSVMR 222 (502)
Q Consensus 207 ~g~in~df~d~~~v~~ 222 (502)
.|+| +||.++|.+++
T Consensus 65 ~GmV-iDF~~lK~~ik 79 (180)
T 3lx3_A 65 DGYV-IDFSILKEKVR 79 (180)
T ss_dssp TSCS-SCHHHHHHHHH
T ss_pred CCCC-CCHHHHHHHHH
T ss_conf 7600-37999999999
No 380
>3lkb_A Probable branched-chain amino acid ABC transporter, amino acid binding protein; branched amino acid, PSI-II, NYSGXRC, structural genomics; 2.40A {Thermus thermophilus}
Probab=20.29 E-value=29 Score=12.26 Aligned_cols=52 Identities=15% Similarity=0.068 Sum_probs=32.9
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECC
Q ss_conf 8883899999997299999972699899998036766674078999999986498499995043
Q gi|254781176|r 75 GSHPEVGRAAAEECIDEITEMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKP 138 (502)
Q Consensus 75 g~~~~~g~~~a~~~~~~i~~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~p 138 (502)
+++|..+..++.+-.++ +.|+++.| .+|+.+--++.++.+.|+..++..+.|
T Consensus 57 ~~~p~~a~~~a~~lv~~--------~~v~vi~~----~~S~~~~a~~~~~~~~~ip~i~~~~~~ 108 (392)
T 3lkb_A 57 QYNNANTQRFFEEAVDR--------FKIPVFLS----YATGANLQLKPLIQELRIPTIPASMHI 108 (392)
T ss_dssp TTCHHHHHHHHHHHHHT--------TCCSCEEE----CCHHHHHHHHHHHHHHTCCEEESCCCG
T ss_pred CCCHHHHHHHHHHHHHC--------CCCEEEEC----CCCHHHHHHHHHHHHCCCEEECCCCCC
T ss_conf 99999999999999866--------99569808----985889998888876492387244564
No 381
>2wmy_A WZB, putative acid phosphatase WZB; hydrolase; 2.21A {Escherichia coli}
Probab=20.28 E-value=29 Score=12.25 Aligned_cols=96 Identities=19% Similarity=0.233 Sum_probs=55.3
Q ss_pred HHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Q ss_conf 9972699899998036766674078999999986498499995043000406788889999999998633354502788-
Q gi|254781176|r 93 TEMLDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPFHFEGSRRMRVAESGIEALQETVDTLIVIPNQN- 171 (502)
Q Consensus 93 ~~~~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf~~eg~~r~~~a~~~~~~l~~~~d~~i~i~n~~- 171 (502)
+..+.+. -+-.||.|+-.|..+.|--++++++.|+-.-+....+|.-+ +-...|-+|+.....
T Consensus 30 ~~~~~~~--~v~SaG~~~~~g~~~~~~a~~vl~~~Gid~~~h~s~~lt~~--------------~~~~~DlIl~M~~~~~ 93 (150)
T 2wmy_A 30 RRLLPSK--KINSAGVGALVDHTADESAIRVAEKNGLCLKGHRGTKFTSA--------------LARQYDLLLVMEYSHL 93 (150)
T ss_dssp HHHCTTS--EEEEEETTCCTTCCCCHHHHHHHHHTTCCCTTCCCCBCCHH--------------HHTTCSEEEESCHHHH
T ss_pred HHHCCCC--CCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCC--------------CCCCCCEEEEECHHHH
T ss_conf 9864348--81676864346899986899999980997432101243301--------------3677899999188899
Q ss_pred -------------HH---------HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf -------------87---------4136653189997446799999988888765
Q gi|254781176|r 172 -------------LF---------RIANDKTTFADAFSMADQVLYSGVSCITDLM 204 (502)
Q Consensus 172 -------------l~---------~~~~~~~~~~~af~~~d~~l~~~v~~i~~~i 204 (502)
++ ++.+|--+=.++|..+=+.|..+++++.+-|
T Consensus 94 ~~l~~~~p~~~~k~~~l~~~~~~~dI~DP~~~~~e~f~~~~~~I~~~i~~ll~~L 148 (150)
T 2wmy_A 94 EQISRIAPEARGKTMLFGHWLDSKEIPDPYRMSDEAFDSVYQLLEQASKRWAEKL 148 (150)
T ss_dssp HHHHHHCGGGGGGEEETTTTSSSCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999768874201443100168888999999998999999999999999999996
No 382
>2a3n_A Putative glucosamine-fructose-6-phosphate aminotransferase; 16423107, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.23A {Salmonella typhimurium LT2}
Probab=20.16 E-value=29 Score=12.24 Aligned_cols=41 Identities=17% Similarity=0.281 Sum_probs=22.0
Q ss_pred HCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCC
Q ss_conf 26998999980367666740789999999864984999950430
Q gi|254781176|r 96 LDKTHMCFVTAGMGGGTGTGAAPIIAKIARNKGVLTVGVVTKPF 139 (502)
Q Consensus 96 ~~~~~~~~~~ag~gggtgtg~~p~ia~~a~~~~~~~~~~v~~pf 139 (502)
+..-++|+.+.-=|.-+-| --..+.||+.|+.||+|+.-|-
T Consensus 100 ~~~~~lvi~iS~SG~t~e~---~~a~~~a~~~g~~~i~it~~~~ 140 (355)
T 2a3n_A 100 LNKDSVVITLSKSGDTKES---VAIAEWCKAQGIRVVAITKNAD 140 (355)
T ss_dssp CCTTCEEEEECSSSCCHHH---HHHHHHHHHTTCEEEEEESCTT
T ss_pred CCCCCEEEEECCCCCCHHH---HHHHHHHHHCCCEEEEEEECCC
T ss_conf 8999889998189998799---9999999975984999851267
No 383
>2g64_A Putative 6-pyruvoyl tetrahydrobiopterin synthase; tetrahydrobiopterin biosynthesis, phosphate elimination, pterine synthesis; 1.80A {Caenorhabditis elegans} SCOP: d.96.1.2
Probab=20.15 E-value=29 Score=12.29 Aligned_cols=18 Identities=22% Similarity=0.438 Sum_probs=13.2
Q ss_pred HHCCCCCCCCHHHHHHHHC
Q ss_conf 5166555589878787641
Q gi|254781176|r 204 MIKEGLINLDFADVRSVMR 222 (502)
Q Consensus 204 i~~~g~in~df~d~~~v~~ 222 (502)
....|++ +||.|++.+++
T Consensus 59 ~~~~G~v-iDf~~lk~~~~ 76 (140)
T 2g64_A 59 DPTSGMV-YDLAKLKKEMS 76 (140)
T ss_dssp CTTTCCS-SCHHHHHHHHH
T ss_pred CCCCCEE-EEHHHHHHHHH
T ss_conf 7877859-63999999999
Done!