HHsearch alignment for GI: 254781177 and conserved domain: PRK10939
>PRK10939 autoinducer-2 (AI-2) kinase; Provisional.
Probab=95.22 E-value=0.11 Score=29.30 Aligned_cols=75 Identities=19% Similarity=0.178 Sum_probs=43.2
Q ss_pred CEEEEEEECCCEEEEEEEEECCCCCCCCCCCCCCCEEEEEEEECC--C---CCCCCCEEECHHHHHHHHHHHHHHHHHHH
Q ss_conf 679999914980699999833766533335677615999996110--1---11008837478999999999999999982
Q gi|254781177|r 22 YIVSALDIGSTKTVCMIGKLVPQNTTSLLSGRTHRIEVIGIGCQQ--S---HGVKMGTIVDIDAVERVVRQVVDAAERMA 96 (440)
Q Consensus 22 ~ii~~iDiGsski~~~v~e~~~~~~~~~~~~~~~~~~iig~g~~~--s---~gi~~G~I~d~~~~~~~I~~ai~~ae~~a 96 (440)
T Consensus 3 ~Y~lgiD~GTss~Ka~l~d~--~G------------~~la~~~~~~~~~~~~~~pg~~E~D~~~~W~~~~~~i~~~~~~a 68 (521)
T PRK10939 3 SYLMALDAGTGSIRAVIFDL--NG------------NQIAVGQAEWTHLAVPDVPGSMEFDLEKNWQLACQCIRQALQKA 68 (521)
T ss_pred CEEEEEECCCCCHHHEEEEC--CC------------CEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
T ss_conf 78999986102100206989--99------------99999984044567899999730099999999999999999982
Q ss_pred CCEEEE-EEEECCCC
Q ss_conf 976537-99972687
Q gi|254781177|r 97 GFTVDN-LLVNISAG 110 (440)
Q Consensus 97 g~~i~~-v~v~i~g~ 110 (440)
T Consensus 69 ~~~~~~I~aI~is~q 83 (521)
T PRK10939 69 NIPASAIAAVSACSM 83 (521)
T ss_pred CCCHHHEEEEEECCC
T ss_conf 999547799998268