HHsearch alignment for GI: 254781177 and conserved domain: TIGR02529
>TIGR02529 EutJ ethanolamine utilization protein EutJ family protein; InterPro: IPR013366 Salmonella typhimurium is capable of growth on ethanolamine as a sole source of carbon nitrogen and energy . During growth on this compound the cells form a multimolecular structure known as a metabolosome, which is similar to the carboxysome used by some photosynthetic bacteria to fix CO2, and is thought to contain the enzymes needed to metabolise this compound to acetyl-CoA. The metabolosome is not directly involved in the biochemistry of ethanolamine utilization - instead its role is thought to be to concentrate the enzymes involved in this process, while also protecting the cell from the build-up of toxic intermediates . The genes involved in growth on ethanolamine are encoded in a 17-gene operon known as the ethanolamine utilization (eut) operon. EutJ shows similarity to chaperonins and may play a role in assembly of the metabolosme , though it is not necessary for growth on this compound..
Probab=100.00 E-value=2.6e-32 Score=209.53 Aligned_cols=238 Identities=23% Similarity=0.432 Sum_probs=194.5
Q ss_pred EEEECCCEEEEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHCCEEEEEEE
Q ss_conf 99914980699999833766533335677615999996110111008837478999999999999999982976537999
Q gi|254781177|r 26 ALDIGSTKTVCMIGKLVPQNTTSLLSGRTHRIEVIGIGCQQSHGVKMGTIVDIDAVERVVRQVVDAAERMAGFTVDNLLV 105 (440)
Q Consensus 26 ~iDiGsski~~~v~e~~~~~~~~~~~~~~~~~~iig~g~~~s~gi~~G~I~d~~~~~~~I~~ai~~ae~~ag~~i~~v~v 105 (440)
T Consensus 1 GVDLGTa~IV~vVLD--~d~------------~PVAg~~~~a~VVRDG~VVDf~~A~~iV~rLK~~lE~klG~~lt~A~~ 66 (240)
T TIGR02529 1 GVDLGTANIVIVVLD--EDG------------QPVAGVMQFADVVRDGIVVDFLEAVEIVKRLKDKLEKKLGIELTHAAT 66 (240)
T ss_pred CCCEEEEEEEEEEEE--CCC------------CEEEEEECHHHEEECCEEEECHHHHHHHHHHHHHHHHHHCCEEEECCE
T ss_conf 975045208999984--599------------638998532323553437820447889999998888880945641315
Q ss_pred ECCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCEEEECCCCCCCCCCCCCCCEEEEEEEE
Q ss_conf 72687664032111203541003527899999864232148653245775112115568655667223423203689999
Q gi|254781177|r 106 NISAGCLKSQQHFVEMKIGWREVNDSDIQILLKSSFRRYLRDQKRTLLHSIITDYALDGKSGIKSPISMFADKIGIESHL 185 (440)
Q Consensus 106 ~i~g~~i~s~~~~~~~~~~~~~I~~~DI~~~i~~a~~~~~~~~~~~iih~~p~~y~iD~~~~v~nPiGm~g~~L~v~~~~ 185 (440)
T Consensus 67 A~PPGt~---------------------------------~~~~k~~v-------------------------------- 81 (240)
T TIGR02529 67 AVPPGTE---------------------------------EGDVKVIV-------------------------------- 81 (240)
T ss_pred ECCCCCC---------------------------------CCCEEEEE--------------------------------
T ss_conf 0089758---------------------------------89758999--------------------------------
Q ss_pred EECCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEECCCHHHHH
Q ss_conf 72313688889987653233112333210234553124334555079999537715578840353024531024227750
Q gi|254781177|r 186 LTVEKSSMKNLERAINRAHLSVERMVASPYASGLATLVDDEFELGSVVIDMGGGTTKIAIFDKGKLVYMDVIAIGGSHVT 265 (440)
Q Consensus 186 v~~~~~~i~~~~~~i~~~gl~v~~i~~~p~Asa~a~L~~~ek~~Gv~iIDiGa~tT~i~i~~~g~l~~~~~i~iGG~~iT 265 (440)
T Consensus 82 ------------NV~EsAG~eV~~V~DEPTAAa~vL~i~n-----G~VVDvGGGTTGiSI~K~GKViy~ADEpTGGtHm~ 144 (240)
T TIGR02529 82 ------------NVVESAGIEVLKVLDEPTAAAAVLQIKN-----GAVVDVGGGTTGISILKKGKVIYSADEPTGGTHMS 144 (240)
T ss_pred ------------EEEECCCEEEEEEECCHHHHHHHHCCCC-----CEEEEECCCCEEEEEEECCCEEEEEECCCCCCCEE
T ss_conf ------------9872256157665142789998728857-----27998478803357997596899823799986156
Q ss_pred HHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 88886334523678887642574033555300001223357887653043389999999999999999988887640686
Q gi|254781177|r 266 NDLARGLSISLDNAERLKVMHPSIIPSLADEHDILSIPTIGNADHNDLVQVSRAMISRIIQARIEETFELIGERIKKSGF 345 (440)
Q Consensus 266 ~DIa~~l~i~~~eAE~lK~~~G~a~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~l~~II~~Rv~ei~~~i~~~l~~~~~ 345 (440)
T Consensus 145 LV~AG~ygi~~EEAEe~K~~~k-------~e----------------------~E~F~~v~PV~qKmA~Iv~~hi~~~~- 194 (240)
T TIGR02529 145 LVLAGAYGISFEEAEEIKRDKK-------KE----------------------EEVFSVVKPVVQKMASIVKKHIEGQK- 194 (240)
T ss_pred EEEEECCCCCHHHHHHHHHCCC-------CC----------------------EEEEEEECCHHHHHHHHHHHHHCCCC-
T ss_conf 7886126888889887863058-------84----------------------37887604137778999999851188-
Q ss_pred CCCCCCEEEEECCCCCCCCHHHHHHHHH-CCCEEEECCCCCCCCHHHHCCCHHHHHHHHHH
Q ss_conf 4457743999732344457899999983-89759971433478212223723799999999
Q gi|254781177|r 346 SSLASKRIVLTGGASQVIGLQEMLRETI-CSNVRMGRPIGAVGLPFSARSPAFSTVIGLMI 405 (440)
Q Consensus 346 ~~~~~~~IvLtGGgs~l~gl~~~~~~~~-~~~vri~~P~~~~g~~~~~~~p~~sta~Gl~~ 405 (440)
T Consensus 195 ----v~~~yLVGGac~~~~f~~~F~k~~Pg~~v~--~P----------~~P~~vTPLGIA~ 239 (240)
T TIGR02529 195 ----VKDLYLVGGACSFSGFEDVFEKELPGLNVI--KP----------AEPLYVTPLGIAM 239 (240)
T ss_pred ----CCEEEEECCCCCCHHHHHHHHHHCCCCCCC--CC----------CCCEEECHHHHHC
T ss_conf ----336898244005224678887642787621--68----------9873454133323