HHsearch alignment for GI: 254781177 and conserved domain: TIGR02627

>TIGR02627 rhamnulo_kin rhamnulokinase; InterPro: IPR013449 Rhamnulokinase (2.7.1.5 from EC) is an enzyme that catalyzes the second step in rhamnose catabolism.; GO: 0008993 rhamnulokinase activity, 0019301 rhamnose catabolic process.
Probab=93.14  E-value=0.6  Score=25.05  Aligned_cols=129  Identities=17%  Similarity=0.186  Sum_probs=72.6

Q ss_pred             CCHHHHHHHHHHHCCCCHHHHHHHHHHCCC-CCCCCCCCHH-CCC--------CCCCCCCCCCCEEECCHHHHHHHHHHH
Q ss_conf             422775088886334523678887642574-0335553000-012--------233578876530433899999999999
Q gi|254781177|r  259 IGGSHVTNDLARGLSISLDNAERLKVMHPS-IIPSLADEHD-ILS--------IPTIGNADHNDLVQVSRAMISRIIQAR  328 (440)
Q Consensus       259 iGG~~iT~DIa~~l~i~~~eAE~lK~~~G~-a~~~~~~~~~-~i~--------~~~~~~~~~~~~~~i~~~~l~~II~~R  328 (440)
T Consensus       296 IMGLWl~qrv~~~~~~~~dl~~l~~~A~~~p~f~~iInpnD~RF~nP~~M~~eI~~yC-REt~Q~vP~s~aeLArCiFdS  374 (460)
T TIGR02627       296 IMGLWLLQRVCRERDDIKDLAALIEQAKAEPAFKSIINPNDDRFINPENMVEEIQAYC-RETNQPVPESDAELARCIFDS  374 (460)
T ss_pred             HHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEECCCHHHCCCCHHHHHHHHHHH-HHCCCCCCCCHHHHHHHHHHH
T ss_conf             4458999998533013546999999971389811300677311479654799999975-423788999655688878888


Q ss_pred             HHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCEEEECCCCCCCCHHHHCCCHHHHHHHHH
Q ss_conf             9999998888764068644577439997323444578999999838975997143347821222372379999999
Q gi|254781177|r  329 IEETFELIGERIKKSGFSSLASKRIVLTGGASQVIGLQEMLRETICSNVRMGRPIGAVGLPFSARSPAFSTVIGLM  404 (440)
Q Consensus       329 v~ei~~~i~~~l~~~~~~~~~~~~IvLtGGgs~l~gl~~~~~~~~~~~vri~~P~~~~g~~~~~~~p~~sta~Gl~  404 (440)
T Consensus       375 LAl~Y~~~~~~l~~--l~g~~i~~LhIVGGGs~n~~LNQL~AD~cGi~V~--------------AGPvEAs~lGN~  434 (460)
T TIGR02627       375 LALLYRQVLLELAE--LRGKPISQLHIVGGGSQNAFLNQLCADLCGIEVI--------------AGPVEASTLGNI  434 (460)
T ss_pred             HHHHHHHHHHHHHH--HCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCEE--------------ECCHHHHHHHHH
T ss_conf             99999999999873--0268855146861751444667788887288144--------------153367887789