HHsearch alignment for GI: 254781177 and conserved domain: pfam06406
>pfam06406 StbA StbA protein. This family consists of several bacterial StbA plasmid stability proteins.
Probab=99.26 E-value=1.5e-10 Score=81.60 Aligned_cols=164 Identities=20% Similarity=0.277 Sum_probs=110.9
Q ss_pred CCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEEEECCCCEE---EEEECCCHHHHHHHHHHHCC-----CCHHHHH
Q ss_conf 333210234553124334555079999537715578840353024---53102422775088886334-----5236788
Q gi|254781177|r 209 RMVASPYASGLATLVDDEFELGSVVIDMGGGTTKIAIFDKGKLVY---MDVIAIGGSHVTNDLARGLS-----ISLDNAE 280 (440)
Q Consensus 209 ~i~~~p~Asa~a~L~~~ek~~Gv~iIDiGa~tT~i~i~~~g~l~~---~~~i~iGG~~iT~DIa~~l~-----i~~~eAE 280 (440)
T Consensus 144 ~V~pEslpA~~d~l~~~~~~~s~LIVDiGGtT~Dv~vv~g~~~~~s~~~g~~~iGvs~v~~~v~~~L~~~~~~~s~~iad 223 (318)
T pfam06406 144 SVMPESLPAGFSVLKDLDSFESLLIVDLGGTTLDVAHVRGQLEGISKIHGDSRIGVSLVTDAVKSALATASTRTSSFIAD 223 (318)
T ss_pred EEECCCHHHHHHHHHHCCCCCCEEEEECCCCEEEEEEECCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCHHHHH
T ss_conf 78505425677688742876733899808946889998267675440104799776899999999998732775124589
Q ss_pred HH-HHHCCCCCCCCCCCHHCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCC
Q ss_conf 87-64257403355530000122335788765304338999999999999999998888764068644577439997323
Q gi|254781177|r 281 RL-KVMHPSIIPSLADEHDILSIPTIGNADHNDLVQVSRAMISRIIQARIEETFELIGERIKKSGFSSLASKRIVLTGGA 359 (440)
Q Consensus 281 ~l-K~~~G~a~~~~~~~~~~i~~~~~~~~~~~~~~~i~~~~l~~II~~Rv~ei~~~i~~~l~~~~~~~~~~~~IvLtGGg 359 (440)
T Consensus 224 ~~I~~r~---------d~~~l~--~~~~d------~~~~~~V~~~i~~~~~~L~~~v~~~l~~~--~~--~~~V~lVGGG 282 (318)
T pfam06406 224 ELIKHRH---------DNDYLK--QRIND------EDKRDSVMNVINEAVKKLQERVIRALSRF--SG--YTHVMVVGGG 282 (318)
T ss_pred HHHHHHH---------HHHHHH--HHCCC------HHHHHHHHHHHHHHHHHHHHHHHHHHHCC--CC--CCEEEEECCC
T ss_conf 9999631---------255554--42177------14779999999999999999999998522--78--7669998787
Q ss_pred CCCCCHHHHHHHHHCCC-EEEECCCCCCCCHHHHCCCHHHHHHHHHH
Q ss_conf 44457899999983897-59971433478212223723799999999
Q gi|254781177|r 360 SQVIGLQEMLRETICSN-VRMGRPIGAVGLPFSARSPAFSTVIGLMI 405 (440)
Q Consensus 360 s~l~gl~~~~~~~~~~~-vri~~P~~~~g~~~~~~~p~~sta~Gl~~ 405 (440)
T Consensus 283 A~l--i~~air~a~~~p~~~i~~----------~d~PqFAnarGm~~ 317 (318)
T pfam06406 283 AEL--IATAIKKATGVPDAKFIM----------VDNPQFALVLGMAA 317 (318)
T ss_pred HHH--HHHHHHHHHCCCCCEEEE----------CCCHHHHHHHHHHC
T ss_conf 899--899999984699880895----------69806778777753