RPSBLAST alignment for GI: 254781177 and conserved domain: TIGR01175
>gnl|CDD|162237 TIGR01175, pilM, type IV pilus assembly protein PilM. This protein is required for the assembly of the type IV fimbria in Pseudomonas aeruginosa responsible for twitching motility, and for a similar pilus-like structure in Synechocystis. It is also found in species such as Deinococcus described as having natural transformation (for which a type IV pilus-like structure is proposed) but not fimbria. Length = 348
Score = 39.4 bits (92), Expect = 0.002
Identities = 35/181 (19%), Positives = 70/181 (38%), Gaps = 33/181 (18%)
Query: 232 VVIDMGGGTTKIAIFDKGKLVYMDVIAIGGSHVTNDLARGLSISLDNAERLKVMHPSIIP 291
++D+G ++ + + G++++ + G +T++L+R ++ + A K
Sbjct: 191 ALVDIGATSSTLNLLHPGRMLFTREVPFGTRQLTSELSRAYGLNPEEAGEAKQQG----- 245
Query: 292 SLADEHDILSIPTIGNADHNDLVQVSRAMISRIIQARIEETFELIGERIKKSGFSSLASK 351
L +D P + +LV I R +Q F SG +SL
Sbjct: 246 GLPLLYD----PEVLRRFKGELVD----EIRRSLQ------FFTAQ-----SGTNSLD-- 284
Query: 352 RIVLTGGASQVIGLQEMLRETICSNVRMGRPIGAVGLPFSARS-------PAFSTVIGLM 404
+VL GG + + GL + + + + P + L + PA T +GL
Sbjct: 285 GLVLAGGGATLSGLDAAIYQRLGLPTEVANPFALMALDAKVDAGRLAVDAPALMTALGLA 344
Query: 405 I 405
+
Sbjct: 345 L 345