HHsearch alignment for GI: 254781179 and conserved domain: COG0045
>COG0045 SucC Succinyl-CoA synthetase, beta subunit [Energy production and conversion].
Probab=98.27 E-value=1e-05 Score=56.81 Aligned_cols=165 Identities=17% Similarity=0.224 Sum_probs=99.4
Q ss_pred CCHHCCCCCCCCEEECCCEEEECCCCCHH--HHHCC-CCEEEEEC--CCCC--CCCEEEECCHHHHHHHHHHHCC----C
Q ss_conf 50010000212100001213202220001--22105-86256432--4776--4211432598999998863003----6
Q gi|254781179|r 92 DKMRSKQVVSSCGVPVCPSILVNRFTMDS--QHLIS-PPYVIKPL--KGGS--SLGIIVIKKDQSIPLDLLQSSS----W 160 (300)
Q Consensus 92 dK~~~k~~l~~~gIptp~~~~~~~~~~~~--~~~~~-~P~ivKP~--~ggs--S~Gv~~v~~~~el~~~~~~~~~----~ 160 (300)
T Consensus 4 hEYqaKelf~~~GiPvp~g~v~~s~eea~~~a~~lg~~~~VvKaQV~aGGRGKaGGVk~~~s~~ea~~~a~~~lg~~~q~ 83 (387)
T COG0045 4 HEYQAKELFAKYGIPVPPGYVATSPEEAEEAAKELGGGPVVVKAQVHAGGRGKAGGVKLAKSPEEAKEAAEEILGKNYQT 83 (387)
T ss_pred HHHHHHHHHHHCCCCCCCCEEEECHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCEEEECCHHHHHHHHHHHHCCCCCC
T ss_conf 88889989997299899954540899999999981899679992253057666676688389899999999984866545
Q ss_pred C----CCCCCCCCCCCC-CC-EEEEEECCCCCC--CEE--------EE---------------CCCCCCCCCCCCCCCCC
Q ss_conf 6----885422333578-84-578873144442--002--------20---------------25543333110000112
Q gi|254781179|r 161 N----HGDQLLIEQYVD-GI-ELTCGVMGDASL--DVT--------EI---------------AVPKSDFYSYELKYSSL 209 (300)
Q Consensus 161 ~----~~~~vlVEefI~-G~-E~~v~Vl~~~~~--~~~--------ei---------------~~~~~~~~dy~~Ky~~~ 209 (300)
T Consensus 84 ~~~G~~v~~vlvee~~~~~~~E~Ylsiv~DR~~~~p~~~~S~eGGmDIEeVa~~~PekI~~~~idp~~g~~~~~aR~la- 162 (387)
T COG0045 84 DIKGEPVNKVLVEEAVDIIKKEYYLSIVLDRSSRRPVLMASTEGGMDIEEVAEKTPEKIVKVSVDPLTGLRPYQARELA- 162 (387)
T ss_pred CCCCCEEEEEEEEECCCCCCCEEEEEEEEECCCCCEEEEEECCCCCCHHHHHHHCHHHEEEEEECCCCCCCHHHHHHHH-
T ss_conf 7688454289997467776433799999973778379999667795189950028345268974776687877999999-
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEE---EEECCCCEEEEEEE
Q ss_conf 222458652116665544444445775348764579999---99768983999974
Q gi|254781179|r 210 NSTHVLPAKIPLDIYKEVQRLAFLAHQAIGCRGISRSDF---LFDPLSRKVFWLEI 262 (300)
Q Consensus 210 ~~~~~~Pa~l~~~~~~~i~~~a~~~~~alg~~g~~rvDf---~~d~~~g~~~~lEv 262 (300)
T Consensus 163 -----~~lgl~~~~~~~~~~ii~~ly~~f~~~Da~lvEINPLvvt~~~g~v~aLDa 213 (387)
T COG0045 163 -----FKLGLEGELVKQVADIIKKLYKLFVEKDATLVEINPLVVTPDGGDVLALDA 213 (387)
T ss_pred -----HHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEEECCCCCEEEEEE
T ss_conf -----974998789999999999999999975876787525088179980899764