HHsearch alignment for GI: 254781179 and conserved domain: COG1038
>COG1038 PycA Pyruvate carboxylase [Energy production and conversion].
Probab=99.94 E-value=2.2e-25 Score=182.83 Aligned_cols=238 Identities=18% Similarity=0.259 Sum_probs=185.8
Q ss_pred HHHHHHHHHHCCCEEEEECCCCCHHHHH------------------------------HHCCCCEEEECCCCCCC---CC
Q ss_conf 9999999998798899961586568888------------------------------75399899992548843---43
Q gi|254781179|r 19 GKACASALEDAGFKVSQIDVDRSVGLVL------------------------------AHLKPDLAFNVLHGNFG---ED 65 (300)
Q Consensus 19 ~~~i~~aL~~~g~~v~~id~~~~~~~~l------------------------------~~~~~D~vf~~lhG~~g---Ed 65 (300)
T Consensus 19 AIRvFRAa~ELgi~TVAIys~ED~~S~HR~KADEsY~iG~~~~Pi~aYL~IdeII~iAk~~gaD----aIhPGYGfLSEn 94 (1149)
T COG1038 19 AIRVFRAANELGIKTVAIYSEEDRLSLHRFKADESYLIGEGKGPVEAYLSIDEIIRIAKRSGAD----AIHPGYGFLSEN 94 (1149)
T ss_pred HHHHHHHHHHHCCEEEEEEECCCCCHHHHCCCCCEEECCCCCCCHHHHCCHHHHHHHHHHCCCC----EECCCCCCCCCC
T ss_conf 6999998886086489985144543044303551066067887268743299999999970887----313784324479
Q ss_pred CHHHHHHHHHHHHCCCCCHHHHHHCCCCHHCCCCCCCCEEECCCEEEECCCC----CHHHHHCCCCEEEEECCCCCCCCE
Q ss_conf 1023566643210023100233203650010000212100001213202220----001221058625643247764211
Q gi|254781179|r 66 GLVQAILELLEIPYTHSGILASALSMDKMRSKQVVSSCGVPVCPSILVNRFT----MDSQHLISPPYVIKPLKGGSSLGI 141 (300)
Q Consensus 66 g~iq~~le~~~ipy~Gs~~~~~~l~~dK~~~k~~l~~~gIptp~~~~~~~~~----~~~~~~~~~P~ivKP~~ggsS~Gv 141 (300)
T Consensus 95 ~efA~~c~eaGI~FIGP~~e~ld~~GdKv~Ar~~A~~agvPvipgt~~~~~~~ee~~~fa~~~gyPvmiKA~~GGGGRGM 174 (1149)
T COG1038 95 PEFARACAEAGITFIGPKPEVLDMLGDKVKARNAAIKAGVPVIPGTDGPIETIEEALEFAEEYGYPVMIKAAAGGGGRGM 174 (1149)
T ss_pred HHHHHHHHHCCCEEECCCHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCE
T ss_conf 89999999759789688879998844288899999975998556999982129999999986698589997147986652
Q ss_pred EEECCHHHHHHHHHHHC----CCCCCCCCCCCCCCCC-CEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 43259899999886300----3668854223335788-457887314444200220255433331100001122224586
Q gi|254781179|r 142 IVIKKDQSIPLDLLQSS----SWNHGDQLLIEQYVDG-IELTCGVMGDASLDVTEIAVPKSDFYSYELKYSSLNSTHVLP 216 (300)
Q Consensus 142 ~~v~~~~el~~~~~~~~----~~~~~~~vlVEefI~G-~E~~v~Vl~~~~~~~~ei~~~~~~~~dy~~Ky~~~~~~~~~P 216 (300)
T Consensus 175 R~vr~~~~l~~~~~~AksEAkaAFG~~eVyvEk~ve~pkHIEVQiLgD~~GnvvHLfERDCSv---QR--RhQKVVE~AP 249 (1149)
T COG1038 175 RVVRSEADLAEAFERAKSEAKAAFGNDEVYVEKLVENPKHIEVQILGDTHGNVVHLFERDCSV---QR--RHQKVVEVAP 249 (1149)
T ss_pred EEECCHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHCCCCEEEEEEEECCCCCEEEEEECCCCH---HH--CCCEEEEECC
T ss_conf 662588899999999889999741898066565524865268998605778788886235533---10--1440378568
Q ss_pred CC-CHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCEEEEEEECCCC
Q ss_conf 52-116665544444445775348764579999997689839999747265
Q gi|254781179|r 217 AK-IPLDIYKEVQRLAFLAHQAIGCRGISRSDFLFDPLSRKVFWLEINVQP 266 (300)
Q Consensus 217 a~-l~~~~~~~i~~~a~~~~~alg~~g~~rvDf~~d~~~g~~~~lEvN~~P 266 (300)
T Consensus 250 a~~L~~~~R~~ic~~Avkla~~~~Y~~AGTvEFLvd~-~~~fyFIEvNPRi 299 (1149)
T COG1038 250 APYLSPELRDEICDDAVKLARNIGYINAGTVEFLVDE-DGKFYFIEVNPRI 299 (1149)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECC-CCCEEEEEECCCE
T ss_conf 8889999999999999999997397656647888738-8868999954734