HHsearch alignment for GI: 254781179 and conserved domain: PRK05586
>PRK05586 biotin carboxylase; Validated.
Probab=99.97 E-value=8e-31 Score=217.71 Aligned_cols=266 Identities=16% Similarity=0.266 Sum_probs=197.0
Q ss_pred HHHHHHHHHHHCCCEEEEECCCCC--H---------------------------HHHHHHCCCCEEEECCCCCCCCCCHH
Q ss_conf 999999999987988999615865--6---------------------------88887539989999254884343102
Q gi|254781179|r 18 SGKACASALEDAGFKVSQIDVDRS--V---------------------------GLVLAHLKPDLAFNVLHGNFGEDGLV 68 (300)
Q Consensus 18 S~~~i~~aL~~~g~~v~~id~~~~--~---------------------------~~~l~~~~~D~vf~~lhG~~gEdg~i 68 (300)
T Consensus 13 IA~Ri~rt~~~lgi~tVavys~~D~~a~hv~~Ade~~~lg~~~~~~sYln~~~ii~~A~~~g~dAihPG-YGFLSEna~F 91 (447)
T PRK05586 13 IAVRIIRACREMGIETVAVYSEIDKDALHVQLADEAVCIGPASSKDSYLNIYNILSATVLTGAQAIHPG-FGFLSENSKF 91 (447)
T ss_pred HHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHCCEEEECCCCCHHHHHCCHHHHHHHHHHHCCCEEECC-CCHHHCCHHH
T ss_conf 999999999983995999917033678547649899873999956511489999999998499899718-5532238999
Q ss_pred HHHHHHHHHHCCCCCHHHHHHCCCCHHCCCCCCCCEEECCCEEE--ECCCC--CHHHHHCCCCEEEEECCCCCCCCEEEE
Q ss_conf 35666432100231002332036500100002121000012132--02220--001221058625643247764211432
Q gi|254781179|r 69 QAILELLEIPYTHSGILASALSMDKMRSKQVVSSCGVPVCPSIL--VNRFT--MDSQHLISPPYVIKPLKGGSSLGIIVI 144 (300)
Q Consensus 69 q~~le~~~ipy~Gs~~~~~~l~~dK~~~k~~l~~~gIptp~~~~--~~~~~--~~~~~~~~~P~ivKP~~ggsS~Gv~~v 144 (300)
T Consensus 92 a~~~~~~Gi~fIGP~~~~i~~~GdK~~ar~~a~~~gvPv~pg~~~~v~~~~ea~~~a~~iGyPv~lKAa~GGGGrGmriv 171 (447)
T PRK05586 92 AKMCKECNIVFIGPDSETIELMGNKSNAREIMKKAGVPVVPGSEGEIENEEEALKIAEEIGYPVMVKASAGGGGRGIRIV 171 (447)
T ss_pred HHHHHHCCCEEECCCHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCEEEEE
T ss_conf 99999879879895999999853849999999984997656868888999999999986298237630569997736998
Q ss_pred CCHHHHHHHHHHHCCC----CCCCCCCCCCCCCC-CEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCC-
Q ss_conf 5989999988630036----68854223335788-45788731444420022025543333110000112222458652-
Q gi|254781179|r 145 KKDQSIPLDLLQSSSW----NHGDQLLIEQYVDG-IELTCGVMGDASLDVTEIAVPKSDFYSYELKYSSLNSTHVLPAK- 218 (300)
Q Consensus 145 ~~~~el~~~~~~~~~~----~~~~~vlVEefI~G-~E~~v~Vl~~~~~~~~ei~~~~~~~~dy~~Ky~~~~~~~~~Pa~- 218 (300)
T Consensus 172 ~~~~el~~~~~~a~~ea~~aFg~~~v~vEk~i~~~RHIEVQvl~D~~Gn~vhlgeRdCSi---QRr~--QKvIEeaPap~ 246 (447)
T PRK05586 172 RSEEELIKAFNTAKSEAKAAFGDDSMYIEKFIENPRHIEFQILGDNYGNVVHLGERDCSL---QRRN--QKVLEEAPSPV 246 (447)
T ss_pred CCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEEEECCCCCEEEEECCCCCC---CCCC--CCEEEECCCCC
T ss_conf 999999999999999999827998468877247871799999970799888840642466---5688--63799889998
Q ss_pred CHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCEEEEEEECCCCCC-CHHHHHHHHHHHCCCCHHHHHHHHHHHHH
Q ss_conf 11666554444444577534876457999999768983999974726588-82238999999839998999999999751
Q gi|254781179|r 219 IPLDIYKEVQRLAFLAHQAIGCRGISRSDFLFDPLSRKVFWLEINVQPGM-TPVSIFPEMAAYAGYSFRELLLWMVEDAS 297 (300)
Q Consensus 219 l~~~~~~~i~~~a~~~~~alg~~g~~rvDf~~d~~~g~~~~lEvN~~PGl-t~~s~~p~~~~~~G~s~~~li~~ii~~A~ 297 (300)
T Consensus 247 l~~~~r~~m~~~A~~la~~vgY~gaGTvEFl~d~-~~~fyFlEvNtRlQVEH~VT---E~--vtGv---DLV~~Qi~iA~ 317 (447)
T PRK05586 247 MTEELRKKMGEIAVKAAKAVNYKNAGTIEFLLDK-DGNFYFMEMNTRIQVEHPIT---EM--ITGV---DLVKEQIKIAY 317 (447)
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECC-CCCEEEEEEECCCCCCCCCE---EE--CCCC---CHHHHHHHHHC
T ss_conf 8899999999999988886060333247888758-99789993343555566411---00--0377---68999999867
Q ss_pred C
Q ss_conf 1
Q gi|254781179|r 298 C 298 (300)
Q Consensus 298 ~ 298 (300)
T Consensus 318 G 318 (447)
T PRK05586 318 G 318 (447)
T ss_pred C
T ss_conf 9