HHsearch alignment for GI: 254781179 and conserved domain: PRK06849
>PRK06849 hypothetical protein; Provisional.
Probab=99.89 E-value=2.5e-21 Score=156.88 Aligned_cols=235 Identities=14% Similarity=0.168 Sum_probs=166.7
Q ss_pred EEEECCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCC----------------------------CHHHHHHHCCCCE
Q ss_conf 898367871278899999999999998798899961586----------------------------5688887539989
Q gi|254781179|r 2 AVLMGGISSEREVSLSSGKACASALEDAGFKVSQIDVDR----------------------------SVGLVLAHLKPDL 53 (300)
Q Consensus 2 ~vl~GG~s~E~~iSl~S~~~i~~aL~~~g~~v~~id~~~----------------------------~~~~~l~~~~~D~ 53 (300)
T Consensus 7 vLiTg~r~~-------~aL~laR~l~~~Gh~V~~aD~~~~~l~r~Sr~v~~~~~vP~P~~d~~~y~~~Ll~Iv~~e~idl 79 (387)
T PRK06849 7 VLITGARAP-------AALQLARSFHNAGHTVILADSLKYPLSRFSRAVDGFYTIPSPKWDPNAYIQALLSIVKRHNIDL 79 (387)
T ss_pred EEEECCCHH-------HHHHHHHHHHHCCCEEEEECCCCCCCCCHHHCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCE
T ss_conf 999588607-------8999999998789979998489877542000011279869997898999999999999838999
Q ss_pred EEECCCCCCCCCCHHHHHHHHH--HHHCCCCCHHHHHHCCCCHHCCCCCCCCEEECCCEEEECCCCCHHH---HHCCCCE
Q ss_conf 9992548843431023566643--2100231002332036500100002121000012132022200012---2105862
Q gi|254781179|r 54 AFNVLHGNFGEDGLVQAILELL--EIPYTHSGILASALSMDKMRSKQVVSSCGVPVCPSILVNRFTMDSQ---HLISPPY 128 (300)
Q Consensus 54 vf~~lhG~~gEdg~iq~~le~~--~ipy~Gs~~~~~~l~~dK~~~k~~l~~~gIptp~~~~~~~~~~~~~---~~~~~P~ 128 (300)
T Consensus 80 ~IP~~eev----~~~a~~~~~l~~~~~~~~~d~~~l~~LhdK~~F~~~a~~lGl~vP~T~~i~s~edv~~~~~~~~~~~~ 155 (387)
T PRK06849 80 LIPTCEEV----FYLSLAKEELSAYCHVFHFDFDLLLMLHNKFEFIQQARSLGLSAPKTYLITDPEAIINFDFKTPHTPY 155 (387)
T ss_pred EEECCCHH----HHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHCCCCCCE
T ss_conf 99777689----99986576447676376589999998644899999999749999988981899999865533668978
Q ss_pred EEEECCCCCCCCEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEE-EECCCCCCCEEEECCCCCCCCCCCCCCC
Q ss_conf 564324776421143259899999886300366885422333578845788-7314444200220255433331100001
Q gi|254781179|r 129 VIKPLKGGSSLGIIVIKKDQSIPLDLLQSSSWNHGDQLLIEQYVDGIELTC-GVMGDASLDVTEIAVPKSDFYSYELKYS 207 (300)
Q Consensus 129 ivKP~~ggsS~Gv~~v~~~~el~~~~~~~~~~~~~~~vlVEefI~G~E~~v-~Vl~~~~~~~~ei~~~~~~~~dy~~Ky~ 207 (300)
T Consensus 156 ilKPv~~~~~~~v~~~~~~~~l~~-----l~~s~~~p~v~Qe~I~G~~~ct~al~~~Gkv~A~~~---------y~~~~~ 221 (387)
T PRK06849 156 VLKPIYSRFVRRVDLTKTKAAVLK-----LPISHKSPWIMQEFIPGQEYCSYSIVRSGELRAHSC---------YKPEFT 221 (387)
T ss_pred EECCCCCCCCCEEEECCCHHHHHC-----CCCCCCCCEEEEEECCCCEEEEEEEEECCEEEEEEE---------EECCEE
T ss_conf 982376665333652159778615-----887667982899871696758999978999999998---------204220
Q ss_pred C--CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCEEEEEEECCCCC
Q ss_conf 1--22224586521166655444444457753487645799999976898399997472658
Q gi|254781179|r 208 S--LNSTHVLPAKIPLDIYKEVQRLAFLAHQAIGCRGISRSDFLFDPLSRKVFWLEINVQPG 267 (300)
Q Consensus 208 ~--~~~~~~~Pa~l~~~~~~~i~~~a~~~~~alg~~g~~rvDf~~d~~~g~~~~lEvN~~PG 267 (300)
T Consensus 222 ~~~g~~v~fe~v~-----~p~i~e~v~~f~~~~~~tG~isFDFI~~~-dG~~~~IECNPR~t 277 (387)
T PRK06849 222 AGLGAQIAFQPIN-----NPRIEEFVTHFVKELNYTGQISFDFIQTE-NGDAYPIECNPRTT 277 (387)
T ss_pred CCCCEEEEEEECC-----CHHHHHHHHHHHHHCCCEEEEEEEEEECC-CCCEEEEEECCCCC
T ss_conf 5884057889758-----88999999999984785158999999989-99889998459866