HHsearch alignment for GI: 254781179 and conserved domain: PRK12815

>PRK12815 carB carbamoyl phosphate synthase large subunit; Reviewed.
Probab=99.97  E-value=2.4e-28  Score=201.88  Aligned_cols=266  Identities=19%  Similarity=0.256  Sum_probs=208.8

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCC---------------------CCHHHHHHHCCCCEEEECCCCCCCCC
Q ss_conf             787127889999999999999879889996158---------------------65688887539989999254884343
Q gi|254781179|r    7 GISSEREVSLSSGKACASALEDAGFKVSQIDVD---------------------RSVGLVLAHLKPDLAFNVLHGNFGED   65 (300)
Q Consensus         7 G~s~E~~iSl~S~~~i~~aL~~~g~~v~~id~~---------------------~~~~~~l~~~~~D~vf~~lhG~~gEd   65 (300)
T Consensus       568 GqgiEFDY---c~vha~~aLr~~G~etImiN~NPETVSTDyD~sDrLYFEPlt~E~V~~I~~~E~p~gVivqfGGQt~ln  644 (1068)
T PRK12815        568 GQGIEFDY---MCVHAAFALKKEGYETIMINNNPETVSTDYDTADRLYFEPITLEDILNVAEAENIKGVIVQFGGQTAIN  644 (1068)
T ss_pred             CCCCCCHH---HHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHCCCEEEEECCCCCHHH
T ss_conf             24424002---589999999968974899627843123674557735753687999999999858997999648823679


Q ss_pred             CHHHHHHHHHHHHCCCCCHHHHHHCCCCHHCCCCCCCCEEECCCEEEECCCCC--HHHHHCCCCEEEEECCCCCCCCEEE
Q ss_conf             10235666432100231002332036500100002121000012132022200--0122105862564324776421143
Q gi|254781179|r   66 GLVQAILELLEIPYTHSGILASALSMDKMRSKQVVSSCGVPVCPSILVNRFTM--DSQHLISPPYVIKPLKGGSSLGIIV  143 (300)
Q Consensus        66 g~iq~~le~~~ipy~Gs~~~~~~l~~dK~~~k~~l~~~gIptp~~~~~~~~~~--~~~~~~~~P~ivKP~~ggsS~Gv~~  143 (300)
T Consensus       645 --la~~L~~~gv~IlGts~~~Id~aEdR~~F~~ll~~l~i~~p~~~~~~~~~ea~~~a~~iGyPvlvRPSyvLgG~~m~i  722 (1068)
T PRK12815        645 --LAKPLEEAGLPILGTSPDTIDRLEDRDRFYQLLDELGLPHVPGLTATSEEEALAFAKRIGYPVLIRPSYVIGGQGMAV  722 (1068)
T ss_pred             --HHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCHHHHHHHHHHCCCCEEECCCCCCCCCEEEE
T ss_conf             --999999769949827868864241399999999973899999635456679999998649977842443357742389


Q ss_pred             ECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCC-CCCEEEE--CCCCCCCCCCCCCCCCCCCCCCCCC-CC
Q ss_conf             259899999886300366885422333578845788731444-4200220--2554333311000011222245865-21
Q gi|254781179|r  144 IKKDQSIPLDLLQSSSWNHGDQLLIEQYVDGIELTCGVMGDA-SLDVTEI--AVPKSDFYSYELKYSSLNSTHVLPA-KI  219 (300)
Q Consensus       144 v~~~~el~~~~~~~~~~~~~~~vlVEefI~G~E~~v~Vl~~~-~~~~~ei--~~~~~~~~dy~~Ky~~~~~~~~~Pa-~l  219 (300)
T Consensus       723 v~~~~eL~~y~~~a--~~~~~pvlIdkfl~g~E~evDai~Dg~~v~I~gImEHIE~AG-------VHSGDS~~v~Pp~~L  793 (1068)
T PRK12815        723 VYDEPALEAYLEEN--VQQLYPILIDQFIDGKEYEVDAISDGEDVTIPGIIEHIEQAG-------VHSGDSIAVLPPQSL  793 (1068)
T ss_pred             ECCHHHHHHHHHHH--CCCCCCEEEEECCCCCEEEEEEEECCCCEEEEEEEECHHHCC-------CCCCCCEEEECCCCC
T ss_conf             75999999999851--578885562300054046889996499559999642113146-------656885488389878


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHH
Q ss_conf             1666554444444577534876457999999768983999974726588822389999998399989999999
Q gi|254781179|r  220 PLDIYKEVQRLAFLAHQAIGCRGISRSDFLFDPLSRKVFWLEINVQPGMTPVSIFPEMAAYAGYSFRELLLWM  292 (300)
Q Consensus       220 ~~~~~~~i~~~a~~~~~alg~~g~~rvDf~~d~~~g~~~~lEvN~~PGlt~~s~~p~~~~~~G~s~~~li~~i  292 (300)
T Consensus       794 s~~~~~~i~~~t~kia~~L~v~Gl~NiQfavk--~~~vyVIEvNpRAS----RTvPFvSKatG~pl~~iAtkv  860 (1068)
T PRK12815        794 SPEQQAKIRDQAIKIAKKLGFRGIMNIQFLLA--GDEIYVLEVNPRAS----RTVPFVSKATGVPLAKLATKV  860 (1068)
T ss_pred             CHHHHHHHHHHHHHHHHHCEEECCEEEEEEEE--CCEEEEEEEECCCC----CCHHHHHHHCCCCHHHHHHHH
T ss_conf             99999999999999996483545126999997--99899999618755----432667873298899999999