HHsearch alignment for GI: 254781179 and conserved domain: pfam07065
>pfam07065 D123 D123. This family contains a number of eukaryotic D123 proteins approximately 330 residues long. It has been shown that mutated variants of D123 exhibit temperature-dependent differences in their degradation rate. D123 proteins are regulators of eIF2, the central regulator of translational initiation.
Probab=94.57 E-value=0.34 Score=27.74 Aligned_cols=135 Identities=13% Similarity=0.136 Sum_probs=79.0
Q ss_pred HHHHCCCCEEEEECCCC---CC----CCEEEECCHHHHHHHHHHHC--------CC----------CCCCCCCCCCCC--
Q ss_conf 12210586256432477---64----21143259899999886300--------36----------688542233357--
Q gi|254781179|r 120 SQHLISPPYVIKPLKGG---SS----LGIIVIKKDQSIPLDLLQSS--------SW----------NHGDQLLIEQYV-- 172 (300)
Q Consensus 120 ~~~~~~~P~ivKP~~gg---sS----~Gv~~v~~~~el~~~~~~~~--------~~----------~~~~~vlVEefI-- 172 (300)
T Consensus 79 aI~elGG~VfPKLNWSAPkDA~WI~~~nsLkC~~~~DvyLLLKSSdfi~hDL~~af~~c~d~~~~~~~~~~LvLrkw~~l 158 (297)
T pfam07065 79 AIEELGGSVFPKLNWSAPKDATWILPNNSLKCRTLSDVYLLLKSSDFITHDLTHAYDECIDDSPDPSISYELVLRKWYDL 158 (297)
T ss_pred HHHHCCCEEEEECCCCCCCCCEEECCCCCEEECCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCC
T ss_conf 99970880565236789776304346894375569999998730047777787676422456767887717998521457
Q ss_pred -CCCEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH-HHHHHHCCCCCEEEEEEEE
Q ss_conf -88457887314444200220255433331100001122224586521166655444444-4577534876457999999
Q gi|254781179|r 173 -DGIELTCGVMGDASLDVTEIAVPKSDFYSYELKYSSLNSTHVLPAKIPLDIYKEVQRLA-FLAHQAIGCRGISRSDFLF 250 (300)
Q Consensus 173 -~G~E~~v~Vl~~~~~~~~ei~~~~~~~~dy~~Ky~~~~~~~~~Pa~l~~~~~~~i~~~a-~~~~~alg~~g~~rvDf~~ 250 (300)
T Consensus 159 ~p~~EFRcFVr~~~li~IsQRd---~nyy~~L~-------------~~~~~i~~~I~~Ff~~~i~~~fp~~~yv-fDVYi 221 (297)
T pfam07065 159 NPALEFRCFVKNNKLVGISQRD---LNYYEYLA-------------ELKEDIKDAIQEFFEEKILPHFPDDDYV-FDVYI 221 (297)
T ss_pred CCCCEEEEEEECCEEEEEECCC---CCHHHHHH-------------HHHHHHHHHHHHHHHHHHHHHCCCCCEE-EEEEE
T ss_conf 8662788999878899984364---50777788-------------7799999999999999987437888879-99996
Q ss_pred ECCCCEEEEEEECCCCCCCHH
Q ss_conf 768983999974726588822
Q gi|254781179|r 251 DPLSRKVFWLEINVQPGMTPV 271 (300)
Q Consensus 251 d~~~g~~~~lEvN~~PGlt~~ 271 (300)
T Consensus 222 ~~~~~rv~liD~NP~~~~Tdp 242 (297)
T pfam07065 222 PRPFDKVWLIDFNPFGRHTDP 242 (297)
T ss_pred CCCCCEEEEEEECCCCCCCCC
T ss_conf 499994999996788888824