PSIBLAST alignment of GI: 254781179 and protein with PDB id: 1iow
>gi|157831486|pdb|1IOW|A Chain A, Complex Of Y216f D-Ala:d-Ala Ligase With Adp And A Phosphoryl Phosphinate Length = 306
Score = 194 bits (492), Expect = 1e-47, Method: Composition-based stats.
Identities = 104/305 (34%), Positives = 161/305 (52%), Gaps = 13/305 (4%)
Query: 1 MAVLMGGISSEREVSLSSGKACASALEDAGFKVSQIDVDRSVGLVLAHLKPDLAFNVLHG 60
+AVL+GG S+EREVSL+SG A + L + G +D L + F LHG
Sbjct: 5 IAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPKEVDVTQLKSMGFQKVFIALHG 64
Query: 61 NFGEDGLVQAILELLEIPYTHSGILASALSMDKMRSKQVVSSCGVPVCPSILVNRFTMDS 120
GEDG +Q +LEL+ +PYT SG++ASALSMDK+RSK + G+PV P + + R +
Sbjct: 65 RGGEDGTLQGMLELMGLPYTGSGVMASALSMDKLRSKLLWQGAGLPVAPWVALTRAEFEK 124
Query: 121 ---------QHLISPPYVIKPLKGGSSLGIIVIKKDQSIPLDLLQSSSWNHGDQLLIEQY 171
+ P ++KP + GSS+G+ + + ++ L ++ H +++LIE++
Sbjct: 125 GLSDKQLAEISALGLPVIVKPSREGSSVGMSKVVAENALQDAL--RLAFQHDEEVLIEKW 182
Query: 172 VDGIELTCGVMGDASLDVTEIAVPKSDFYSYELKYSSLNSTHVLPAKIPLDIYKEVQRLA 231
+ G E T ++G+ L P FY YE K+ S + + PA + +Q L
Sbjct: 183 LSGPEFTVAILGEEILPSI-RIQPSGTFYDYEAKFLSDETQYFCPAGLEASQEANLQALV 241
Query: 232 FLAHQAIGCRGISRSDFLFDPLSRKVFWLEINVQPGMTPVSIFPEMAAYAGYSFRELLLW 291
A +GC+G R D + D + + LE N PGMT S+ P A AG SF +L++
Sbjct: 242 LKAWTTLGCKGWGRIDVMLD-SDGQFYLLEANTSPGMTSHSLVPMAARQAGMSFSQLVVR 300
Query: 292 MVEDA 296
++E A
Sbjct: 301 ILELA 305