PSIBLAST alignment of GI: 254781179 and protein with PDB id: 1jdb
gi|3318817|pdb|1JDB|B Chain B, Carbamoyl Phosphate Synthetase From Escherichia Coli Length = 1073
>gi|3318821|pdb|1JDB|E Chain E, Carbamoyl Phosphate Synthetase From Escherichia Coli Length = 1073
>gi|3318825|pdb|1JDB|H Chain H, Carbamoyl Phosphate Synthetase From Escherichia Coli Length = 1073
>gi|3318829|pdb|1JDB|K Chain K, Carbamoyl Phosphate Synthetase From Escherichia Coli Length = 1073
>gi|4929935|pdb|1BXR|A Chain A, Structure Of Carbamoyl Phosphate Synthetase Complexed With The Atp Analog Amppnp Length = 1073
Score = 69.1 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 44/313 (14%), Positives = 94/313 (30%), Gaps = 40/313 (12%)
Query: 18 SGKACASALEDAGFKVSQIDVD---------------------RSVGLVLAHLKPDLAFN 56
SG AL + G++V ++ + V ++ +PD
Sbjct: 29 SGAQACKALREEGYRVILVNSNPATIMTDPEMADATYIEPIHWEVVRKIIEKERPDAVLP 88
Query: 57 VLHGN----FGEDGLVQAILELLEIPYTHSGILASALSMDKMRSKQVVSSCGVPVCPS-- 110
+ G + Q +LE + + A + D+ R + G+ S
Sbjct: 89 TMGGQTALNCALELERQGVLEEFGVTMIGATADAIDKAEDRRRFDVAMKKIGLETARSGI 148
Query: 111 ILVNRFTMDSQHLISPPYVIKPLKGGSSLGIIVIKKDQSIPLDLLQSSSWNHGDQLLIEQ 170
+ + P +I+P G + + + + +LLI++
Sbjct: 149 AHTMEEALAVAADVGFPCIIRPSFTMGGSGGGIAYNREEFEEICARGLDLSPTKELLIDE 208
Query: 171 YVDGIELTCGVMGDASLDVTEIAVPKSDFYSYELKYSSLNSTHVLPAKIPLDIYKEVQRL 230
+ G + + D I +F + + + +
Sbjct: 209 SLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMGIHTGDSITVAPAQTLTDKEYQIMRNAS 268
Query: 231 AFLAHQAIGCRGISRSDFLFDPLSRKVFWLEINVQPGMTPVS-------IFPE---MAA- 279
+ + G S F +P + ++ +E+N P ++ S FP A
Sbjct: 269 MAVLREIGVETGGSNVQFAVNPKNGRLIVIEMN--PRVSRSSALASKATGFPIAKVAAKL 326
Query: 280 YAGYSFRELLLWM 292
GY+ EL+ +
Sbjct: 327 AVGYTLDELMNDI 339