PSIBLAST alignment of GI: 254781179 and protein with PDB id: 2pvp

>gi|171848811|pdb|2PVP|A Chain A, Crystal Structure Of D-Alanine-D-Alanine Ligase From Helicobacter Pylori Length = 367
>gi|171848812|pdb|2PVP|B Chain B, Crystal Structure Of D-Alanine-D-Alanine Ligase From Helicobacter Pylori Length = 367
 Score = 91.5 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 66/314 (21%), Positives = 116/314 (36%), Gaps = 45/314 (14%)

Query: 2   AVLMGGISSEREVSLSSGKACASALED---------AGFKVSQID---VDRSVGLVLAHL 49
            VL GG S E E+S+ S  A    L+D                I+   +       +   
Sbjct: 24  CVLFGGASFEHEISIVSAIALKGVLKDRIKYFIFLDENHHFYLIEESNMHSKYFAQIKEK 83

Query: 50  KPD-----------------------LAFNVLHGNFGEDGLVQAILELLEIPYTHSGILA 86
           K                         L  N++HG  GEDG + ++LE   I +    I A
Sbjct: 84  KLPPLILTHNGLLKNSFLGAKIIELPLVINLVHGGDGEDGKLASLLEFYRIAFIGPRIEA 143

Query: 87  SALSMDKMRSKQVVSSCGVPVCPSILVNRFTMDSQ---HLISPPYVIKPLKGGSSLGIIV 143
           S LS +K  +K      G+     +L+N     +       + P+++KP   GSSLG+ V
Sbjct: 144 SVLSYNKYLTKLYAKDLGIKTLDYVLLNEKNRANALDLMNFNFPFIVKPSNAGSSLGVNV 203

Query: 144 IKKDQSIPLDLLQSSSWNHGDQLLIEQYVDGIELT--CGVMGDASLDVTEIAVPKSDFYS 201
           +K+++ +   L  +    +  ++LIE ++ G++     G         + I  P    + 
Sbjct: 204 VKEEKELIYALDSAF--EYSKEVLIEPFIQGVKEYNLAGCKIKKDFCFSYIEEPNKQEFL 261

Query: 202 YELKYSSLNSTHVLPAKI-PLDIYKEVQRLAFLAHQAIGCRGISRSDFLFDPLSRKVFWL 260
              +     S +  P       + ++++      +  +    I R DF       +V+  
Sbjct: 262 DFKQKYLDFSRNKAPKASLSNALEEQLKENFKKLYSDLFDGAIIRCDFFVIE--NEVYLN 319

Query: 261 EINVQPGMTPVSIF 274
           EIN  PG     +F
Sbjct: 320 EINPIPGSLANYLF 333