PSIBLAST alignment of GI: 254781179 and protein with PDB id: 2yzm

gi|160286257|pdb|2YZM|A Chain A, Structure Of D-Alanine:d-Alanine Ligase With Substrate From Thermus Thermophilus Hb8 Length = 319
>gi|160286258|pdb|2YZM|B Chain B, Structure Of D-Alanine:d-Alanine Ligase With Substrate From Thermus Thermophilus Hb8 Length = 319
 Score =  138 bits (348), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 92/323 (28%), Positives = 150/323 (46%), Gaps = 35/323 (10%)

Query: 3   VLMGGISSEREVSLSSGKACASALEDAGFKVSQIDVDRSVGLVLAH-------------- 48
           ++ GG+S E EVSL S +     +    F      + +    +L                
Sbjct: 5   LIAGGVSPEHEVSLLSAEGVLRHIP---FPTDLAVIAQDGRWLLGEKALTALEAKAAPEG 61

Query: 49  ----------LKPDLAFNVLHGNFGEDGLVQAILELLEIPYTHSGILASALSMDKMRSKQ 98
                      + D+ F +LHG FGEDG VQ  LELL  PY  +G+ ASAL MDK  SK+
Sbjct: 62  EHPFPPPLSWERYDVVFPLLHGRFGEDGTVQGFLELLGKPYVGAGVAASALCMDKDLSKR 121

Query: 99  VVSSCGVPVCPSILVNRFTMDSQHLISPPYVIKPLKGGSSLGIIVIKKDQSIPLDLLQSS 158
           V++  GVPV P + V +          P + +KP   GSS+GI  +++ Q +   L  + 
Sbjct: 122 VLAQAGVPVVPWVAVRKGEPPVVPFDPP-FFVKPANTGSSVGISRVERFQDLEAALALAF 180

Query: 159 SWNHGDQLLIEQYVDGI---ELTCGVMGDASLDVTEIAVPKSDFYSYELKYSSLNSTHVL 215
              + ++ ++E+ +  +   E+                  ++ FY YE KY+   +  ++
Sbjct: 181 --RYDEKAVVEKALSPVRELEVGVLGNVFGEASPVGEVRYEAPFYDYETKYTPGRAELLI 238

Query: 216 PAKIPLDIYKEVQRLAFLAHQAIGCRGISRSDFLFDPLSRKVFWLEINVQPGMTPVSIFP 275
           PA +     + VQ LA  A++ +G RG++R DF       +++  E+N  PG TP S++P
Sbjct: 239 PAPLDPGTQETVQELALKAYKVLGVRGMARVDFFLAE--GELYLNELNTIPGFTPTSMYP 296

Query: 276 EMAAYAGYSFRELLLWMVEDASC 298
            +    G ++ ELL  +VE A  
Sbjct: 297 RLFEAGGVAYPELLRRLVELALT 319