PSIBLAST alignment of GI: 254781179 and protein with PDB id: 2yzm
gi|160286257|pdb|2YZM|A Chain A, Structure Of D-Alanine:d-Alanine Ligase With Substrate From Thermus Thermophilus Hb8 Length = 319
>gi|160286258|pdb|2YZM|B Chain B, Structure Of D-Alanine:d-Alanine Ligase With Substrate From Thermus Thermophilus Hb8 Length = 319
Score = 138 bits (348), Expect = 7e-31, Method: Composition-based stats.
Identities = 92/323 (28%), Positives = 150/323 (46%), Gaps = 35/323 (10%)
Query: 3 VLMGGISSEREVSLSSGKACASALEDAGFKVSQIDVDRSVGLVLAH-------------- 48
++ GG+S E EVSL S + + F + + +L
Sbjct: 5 LIAGGVSPEHEVSLLSAEGVLRHIP---FPTDLAVIAQDGRWLLGEKALTALEAKAAPEG 61
Query: 49 ----------LKPDLAFNVLHGNFGEDGLVQAILELLEIPYTHSGILASALSMDKMRSKQ 98
+ D+ F +LHG FGEDG VQ LELL PY +G+ ASAL MDK SK+
Sbjct: 62 EHPFPPPLSWERYDVVFPLLHGRFGEDGTVQGFLELLGKPYVGAGVAASALCMDKDLSKR 121
Query: 99 VVSSCGVPVCPSILVNRFTMDSQHLISPPYVIKPLKGGSSLGIIVIKKDQSIPLDLLQSS 158
V++ GVPV P + V + P + +KP GSS+GI +++ Q + L +
Sbjct: 122 VLAQAGVPVVPWVAVRKGEPPVVPFDPP-FFVKPANTGSSVGISRVERFQDLEAALALAF 180
Query: 159 SWNHGDQLLIEQYVDGI---ELTCGVMGDASLDVTEIAVPKSDFYSYELKYSSLNSTHVL 215
+ ++ ++E+ + + E+ ++ FY YE KY+ + ++
Sbjct: 181 --RYDEKAVVEKALSPVRELEVGVLGNVFGEASPVGEVRYEAPFYDYETKYTPGRAELLI 238
Query: 216 PAKIPLDIYKEVQRLAFLAHQAIGCRGISRSDFLFDPLSRKVFWLEINVQPGMTPVSIFP 275
PA + + VQ LA A++ +G RG++R DF +++ E+N PG TP S++P
Sbjct: 239 PAPLDPGTQETVQELALKAYKVLGVRGMARVDFFLAE--GELYLNELNTIPGFTPTSMYP 296
Query: 276 EMAAYAGYSFRELLLWMVEDASC 298
+ G ++ ELL +VE A
Sbjct: 297 RLFEAGGVAYPELLRRLVELALT 319