PSIBLAST alignment of GI: 254781179 and protein with PDB id: 3k3p

>gi|306991644|pdb|3K3P|A Chain A, Crystal Structure Of The Apo Form Of D-Alanine:d-Alanine Ligase (Ddl) From Streptococcus Mutans Length = 383
>gi|306991645|pdb|3K3P|B Chain B, Crystal Structure Of The Apo Form Of D-Alanine:d-Alanine Ligase (Ddl) From Streptococcus Mutans Length = 383
 Score =  151 bits (382), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 88/335 (26%), Positives = 147/335 (43%), Gaps = 44/335 (13%)

Query: 2   AVLMGGISSEREVSLSSGKACASALEDAGFKVSQIDVDRSVGLVLAHLKPD--------- 52
            +L GG S+ER+VS+ S ++   A+    F V    + ++    +   + D         
Sbjct: 41  VLLYGGRSAERDVSVLSAESVMRAINYDNFLVKTYFITQAG-DFIKTQEFDSQPSETDKL 99

Query: 53  ----------------------LAFNVLHGNFGEDGLVQAILELLEIPYTHSGILASALS 90
                                 + F VLHG  GEDG +Q  LE+L++PY  + IL+S+++
Sbjct: 100 MTNDTIIASQKIKPSDIYEEEAVVFPVLHGPMGEDGSIQGFLEVLKMPYVGTNILSSSVA 159

Query: 91  MDKMRSKQ-------VVSSCGVPVCPSILVNRFTMDSQHLISPPYVIKPLKGGSSLGIIV 143
           MDK+ + Q       +     V +     +     + +  +  P  +KP   GSS+GI  
Sbjct: 160 MDKITTNQVLESATTIPQVAYVALIEGEPLESKLAEVEEKLIYPVFVKPANMGSSVGISK 219

Query: 144 IKKDQSIPLDLLQSSSWNHGDQLLIEQYVDGIELTCGV--MGDASLDVTEIAVPKSDFYS 201
            +    +   +  +    +  ++LIEQ VD  E+  G+    D    +    V    FY 
Sbjct: 220 AENRTDLKQAIALAL--KYDSRVLIEQGVDAREIEVGILGNTDVKTTLPGEIVKDVAFYD 277

Query: 202 YELKYSSLNSTHVLPAKIPLDIYKEVQRLAFLAHQAIGCRGISRSDFLFDPLSRKVFWLE 261
           YE KY     T  +PA+I   I ++++  A  A + +GC G+SR DF       KV+  E
Sbjct: 278 YEAKYIDNKITMAIPAEIDPVIVEKMRDYAATAFRTLGCCGLSRCDFFLTE-DGKVYLNE 336

Query: 262 INVQPGMTPVSIFPEMAAYAGYSFRELLLWMVEDA 296
           +N  PG T  S++P +    G S+  L+  +V  A
Sbjct: 337 LNTMPGFTQWSMYPLLWENMGLSYSVLIEELVSLA 371